BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4275
(182 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270005640|gb|EFA02088.1| hypothetical protein TcasGA2_TC007723 [Tribolium castaneum]
Length = 447
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/156 (75%), Positives = 136/156 (87%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF L+LNPW+IRQC TIGV++PT IQ IP +L DCIG AKTGSGKTLAFALPIL
Sbjct: 4 KSFDKLQLNPWIIRQCATIGVRSPTPIQTNCIPPILAGRDCIGAAKTGSGKTLAFALPIL 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK CEDPYGIFAL+LTPTRELA+QI DQF V+GKVMNLR +I GGMDMV QGK+LA+KP
Sbjct: 64 QKLCEDPYGIFALILTPTRELAFQIADQFAVIGKVMNLRHCVIVGGMDMVVQGKDLARKP 123
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRLADHL++CNTF+ N+++FLVLDEADRL
Sbjct: 124 HIVVATPGRLADHLESCNTFNFNKLRFLVLDEADRL 159
>gi|322796322|gb|EFZ18887.1| hypothetical protein SINV_00745 [Solenopsis invicta]
Length = 420
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 137/161 (85%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M + +K F LKLN WL+ QC+++G+K PT IQ+ IP +L EDCIGCAKTGSGKTLAF
Sbjct: 1 MNEEVKDFLHLKLNSWLLAQCKSMGLKKPTPIQENCIPRILMGEDCIGCAKTGSGKTLAF 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPILQK CEDPYGIFALVLTPTRELA+QI DQF +GKV+NL+ +I GGMDM+ QG E
Sbjct: 61 ALPILQKLCEDPYGIFALVLTPTRELAFQIADQFAAIGKVINLKKCVIVGGMDMMIQGLE 120
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L+K+PHIV+ATPGRLADHLD+CNTFSL +IKFLVLDEADRL
Sbjct: 121 LSKRPHIVVATPGRLADHLDSCNTFSLQKIKFLVLDEADRL 161
>gi|307167913|gb|EFN61290.1| Probable ATP-dependent RNA helicase DDX49 [Camponotus floridanus]
Length = 457
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/159 (72%), Positives = 136/159 (85%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ IK F+DLKLN WL+ QC T+G+K PT IQ+ IP +L EDCIGCAKTGSGKTLAFAL
Sbjct: 2 NEIKDFSDLKLNSWLLAQCDTMGLKNPTLIQQNCIPRILAGEDCIGCAKTGSGKTLAFAL 61
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQK CEDPYGIFALVLTPTRELA+QI DQF +GK +NL+ ++ GGMDM+ QG EL+
Sbjct: 62 PILQKLCEDPYGIFALVLTPTRELAFQIADQFAAIGKAINLKKCVVVGGMDMMVQGLELS 121
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PHIV+ATPGRLADHLD+C+TFSL +IKFLVLDEADRL
Sbjct: 122 KRPHIVVATPGRLADHLDSCDTFSLQKIKFLVLDEADRL 160
>gi|332016384|gb|EGI57297.1| Putative ATP-dependent RNA helicase DDX49 [Acromyrmex echinatior]
Length = 461
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/161 (72%), Positives = 136/161 (84%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M IK F+DLKLN WL+ QC+++G+K PT IQ+ IP +L EDCIGCAKTGSGKTLAF
Sbjct: 6 MSKEIKHFSDLKLNSWLLAQCESMGLKKPTPIQQNCIPRILMGEDCIGCAKTGSGKTLAF 65
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
LPILQK CEDPYGIFALVLTPTRELA+QI DQF +GK +NL+ +I GGMDM+ QG E
Sbjct: 66 VLPILQKLCEDPYGIFALVLTPTRELAFQIADQFTAIGKAINLKKCVIVGGMDMMVQGLE 125
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L+K+PHIV+ATPGRLADHLD+C+TFSL +IKFLVLDEADRL
Sbjct: 126 LSKRPHIVVATPGRLADHLDSCDTFSLQKIKFLVLDEADRL 166
>gi|242005222|ref|XP_002423470.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212506558|gb|EEB10732.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 422
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/156 (70%), Positives = 133/156 (85%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F DL LN W++RQC + G+ PT IQ IP +L DCIGCAKTGSGKTLAFALPIL
Sbjct: 3 ERFEDLNLNKWIVRQCDSFGLTKPTPIQAHCIPKILEGNDCIGCAKTGSGKTLAFALPIL 62
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK E+P+GIFALVLTPTRELA+QIG+QFL GKV+NL++ +I+GGMDMV QG+EL+K+P
Sbjct: 63 QKLSEEPFGIFALVLTPTRELAFQIGEQFLAYGKVINLKLCVISGGMDMVTQGQELSKRP 122
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV++TPGRLADHLD+CNTFSL +I+FLVLDEADRL
Sbjct: 123 HIVVSTPGRLADHLDSCNTFSLKKIRFLVLDEADRL 158
>gi|156549811|ref|XP_001606554.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Nasonia
vitripennis]
Length = 456
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 114/155 (73%), Positives = 131/155 (84%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
FTDL ++ W+I Q + IGVK PT IQ+ IP +L+ +DCIGCAKTGSGKTLAFALPILQ
Sbjct: 3 EFTDLNISSWIIDQLKLIGVKKPTPIQQNCIPAILSGKDCIGCAKTGSGKTLAFALPILQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFALVLTPTRELA+QIGDQF +GK +NL+ I GGMDMV QG+ELA+ PH
Sbjct: 63 KLSEDPYGIFALVLTPTRELAFQIGDQFAAIGKTINLKKCTIVGGMDMVVQGQELARHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADHL++CNTFSL RIKFLVLDEADRL
Sbjct: 123 IVVATPGRLADHLESCNTFSLARIKFLVLDEADRL 157
>gi|383851888|ref|XP_003701463.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Megachile rotundata]
Length = 449
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/155 (71%), Positives = 127/155 (81%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+FT L LN WL+ QC +G+K PT IQ+ IP +L EDCIGCAKTGSGKTLAFALPILQ
Sbjct: 2 TFTTLNLNSWLVDQCNFMGLKNPTPIQQNCIPRILAGEDCIGCAKTGSGKTLAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFAL+LTPTRELA+QI DQF +GK + L+ +I GGMDMV QG EL+K PH
Sbjct: 62 KLSEDPYGIFALILTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVIQGLELSKHPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADHL +CNTFSL +IKFLVLDEADRL
Sbjct: 122 IVVATPGRLADHLTSCNTFSLKKIKFLVLDEADRL 156
>gi|346466157|gb|AEO32923.1| hypothetical protein [Amblyomma maculatum]
Length = 487
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 130/155 (83%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DLKLN W+I Q T+G+K P+ IQ+ IP +LN +DCIGCAKTGSGKTLAFALPILQ
Sbjct: 31 TFKDLKLNKWMIDQLDTLGIKNPSPIQENCIPAILNGKDCIGCAKTGSGKTLAFALPILQ 90
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFAL+LTPTRELA+QI +QF V+GK LR +I GGMDMV QG+ LA+ PH
Sbjct: 91 KLFEDPYGIFALILTPTRELAFQISEQFKVVGKAAGLRDCVIVGGMDMVTQGQILAESPH 150
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRLADHL++CNTF+L RI+FLVLDEADRL
Sbjct: 151 VVVATPGRLADHLESCNTFTLKRIRFLVLDEADRL 185
>gi|350415766|ref|XP_003490744.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
impatiens]
Length = 452
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/155 (71%), Positives = 128/155 (82%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L+ WL++QC +G+K PT IQK IP +L +DCIGCAKTGSGKTLAFALPILQ
Sbjct: 2 SFAALNLSSWLVQQCNFMGLKCPTPIQKNCIPKILAGDDCIGCAKTGSGKTLAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFALVLTPTRELA+QI DQF +GK + L+ +I GGMDMV QG EL+K PH
Sbjct: 62 KLSEDPYGIFALVLTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVVQGLELSKHPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADHL++CNTFSL +IKFLVLDEADRL
Sbjct: 122 IVVATPGRLADHLESCNTFSLKQIKFLVLDEADRL 156
>gi|380026593|ref|XP_003697032.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Apis
florea]
Length = 452
Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/155 (70%), Positives = 129/155 (83%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL L+ WL++QC +G+K PT IQ+ IP +L +DCIGCAKTGSGKTLAFALPILQ
Sbjct: 2 TFADLNLSLWLVQQCTFMGLKYPTSIQQNCIPRILAGDDCIGCAKTGSGKTLAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFALVLTPTRELA+QI DQF +GK + L+ +I GGMDMV QG EL+K PH
Sbjct: 62 KLSEDPYGIFALVLTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVIQGLELSKHPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADHL++CNTFSL +IKFLVLDEADRL
Sbjct: 122 IVVATPGRLADHLESCNTFSLKQIKFLVLDEADRL 156
>gi|340728741|ref|XP_003402675.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
terrestris]
Length = 452
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/155 (70%), Positives = 128/155 (82%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L+ WL++QC +G+K PT IQK IP +L +DCIGCAKTGSGKTLAFALPILQ
Sbjct: 2 SFAALNLSSWLVQQCNFMGLKCPTPIQKNCIPKILAGDDCIGCAKTGSGKTLAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFAL+LTPTRELA+QI DQF +GK + L+ +I GGMDMV QG EL+K PH
Sbjct: 62 KLSEDPYGIFALILTPTRELAFQIADQFSAIGKSIGLKKCVIVGGMDMVVQGLELSKHPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADHL++CNTFSL +IKFLVLDEADRL
Sbjct: 122 IVVATPGRLADHLESCNTFSLKQIKFLVLDEADRL 156
>gi|332374708|gb|AEE62495.1| unknown [Dendroctonus ponderosae]
Length = 470
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 132/161 (81%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M + + +F+ LKL W+++QC +IGVK PT IQ IP +L + CIG AKTGSGKTLAF
Sbjct: 1 MAEELSNFSQLKLQNWIVKQCHSIGVKRPTPIQANCIPKILEGKTCIGAAKTGSGKTLAF 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPI+QK EDPYGI+ALVLTP RELA+QI DQF +LGK MN+R ++ GGMDMV+QG++
Sbjct: 61 ALPIVQKLYEDPYGIYALVLTPIRELAFQIADQFAILGKPMNMRTCVVVGGMDMVEQGRQ 120
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L+K PH+V+ATPGRL DHL+ C+TF+L+RIKFLV+DEADRL
Sbjct: 121 LSKVPHVVVATPGRLVDHLEGCDTFTLSRIKFLVIDEADRL 161
>gi|427783023|gb|JAA56963.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 467
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/155 (69%), Positives = 131/155 (84%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DLKLN W+I Q +T+G+ P+ IQ+ IP +L+ +DCIGCAKTGSGKTLAFALPILQ
Sbjct: 11 NFADLKLNKWIIDQLETLGISKPSPIQENCIPAILSGKDCIGCAKTGSGKTLAFALPILQ 70
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFAL+LTPTRELA+QI DQF V+GK + L+ +I GGMDMV QG+ LA+ PH
Sbjct: 71 KLFEDPYGIFALILTPTRELAFQICDQFKVVGKAVGLKECVIVGGMDMVTQGQVLAESPH 130
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRLADHL++CNTF+L RI+FLVLDEADRL
Sbjct: 131 VVVATPGRLADHLESCNTFTLKRIRFLVLDEADRL 165
>gi|328789449|ref|XP_003251275.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Apis
mellifera]
Length = 452
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/155 (70%), Positives = 128/155 (82%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ WL++QC +G+K PT IQ+ IP +L DCIGCAKTGSGKTLAFALPILQ
Sbjct: 2 TFAELNLSSWLVQQCTFMGLKYPTPIQQNCIPRILAGTDCIGCAKTGSGKTLAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFALVLTPTRELA+QI DQF +GK + L+ II GGMDMV QG EL+K PH
Sbjct: 62 KLSEDPYGIFALVLTPTRELAFQIADQFSAIGKSIGLKKCIIVGGMDMVVQGLELSKHPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADHL++CNTFSL +IKFLVLDEADRL
Sbjct: 122 IVVATPGRLADHLESCNTFSLKQIKFLVLDEADRL 156
>gi|443682977|gb|ELT87384.1| hypothetical protein CAPTEDRAFT_162583 [Capitella teleta]
Length = 460
Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/157 (68%), Positives = 128/157 (81%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL LN WL++QC+ +G+ PT IQ +P +L+ DCIGCAKTGSGKT AFALPI
Sbjct: 15 LKSFVDLGLNDWLVKQCEAVGMTRPTPIQLNCVPKILSGHDCIGCAKTGSGKTAAFALPI 74
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK CEDPYGIFALVLTPTRELAYQIG+QF VLGK + L+ +IITGG DM+DQG LA+K
Sbjct: 75 LQKLCEDPYGIFALVLTPTRELAYQIGEQFSVLGKPIGLKEAIITGGRDMIDQGLLLAQK 134
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+V++TPGRLADHL T SL +I FLV+DEADRL
Sbjct: 135 PHVVVSTPGRLADHLRTNADVSLKKIAFLVMDEADRL 171
>gi|328720638|ref|XP_001950474.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Acyrthosiphon pisum]
Length = 470
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 130/155 (83%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ +L Q + +GV +PTEIQK IP +L+ DCIGCAKTGSGKTLAFALPILQ
Sbjct: 2 NFENLNLSKYLCDQLKAVGVNSPTEIQKNCIPKILDGIDCIGCAKTGSGKTLAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E+PYGIFAL+LTPTRELAYQI DQF V+GK NLR ++TGGM+M+ Q +EL+ KPH
Sbjct: 62 KLWEEPYGIFALILTPTRELAYQIADQFAVIGKPKNLRHCVVTGGMEMIVQARELSNKPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV++TPGRLADHL++C+TFSL RI+FLVLDEADRL
Sbjct: 122 IVVSTPGRLADHLESCDTFSLKRIQFLVLDEADRL 156
>gi|390332079|ref|XP_781784.3| PREDICTED: probable ATP-dependent RNA helicase DDX49
[Strongylocentrotus purpuratus]
Length = 478
Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/155 (67%), Positives = 127/155 (81%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L+ WL+RQC+ +G+K PT IQ IP +L DCIGCAKTGSGKT AFALPILQ
Sbjct: 13 SFSGLGLHDWLVRQCEAVGIKQPTPIQHNCIPPILKGSDCIGCAKTGSGKTAAFALPILQ 72
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYG+F LV+TPTREL QI +QF VLGK + LRV+++ GG+DMV+QG+EL+KKPH
Sbjct: 73 KLSEDPYGVFGLVVTPTRELGIQIAEQFRVLGKPIGLRVTVVIGGIDMVEQGRELSKKPH 132
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ + +TF L+ IKFLVLDEADRL
Sbjct: 133 IVIATPGRLADHIKSTSTFDLHAIKFLVLDEADRL 167
>gi|442755009|gb|JAA69664.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 291
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 135/173 (78%), Gaps = 5/173 (2%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F DL+L W+I Q ++G+K P+ +Q+ IP +L +DCIGCAKTGSGKTLAFAL
Sbjct: 13 DP--TFEDLQLKKWIIDQLNSLGIKKPSPVQQNCIPSILKGKDCIGCAKTGSGKTLAFAL 70
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQK EDPYGIFALVLTPTRELA+QI +QF V+GK + L+ +I GGMDMV QG+ LA
Sbjct: 71 PILQKLFEDPYGIFALVLTPTRELAFQISEQFKVIGKAVGLKDCVIVGGMDMVTQGRLLA 130
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL---SLMTSLKFFFF 172
+ PH+V++TPGRLADHL++CNTF+L RIKFLVLDEADRL LK FF
Sbjct: 131 ESPHVVVSTPGRLADHLESCNTFTLGRIKFLVLDEADRLLEGHFNEQLKTIFF 183
>gi|307195490|gb|EFN77376.1| Probable ATP-dependent RNA helicase DDX49 [Harpegnathos saltator]
Length = 444
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/136 (77%), Positives = 118/136 (86%)
Query: 26 VKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRE 85
+K PT IQ+ IP +L EDCIGCAKTGSGKTLAFALPILQK CEDPYGIFALVLTPTRE
Sbjct: 1 LKQPTAIQQNCIPRILGGEDCIGCAKTGSGKTLAFALPILQKLCEDPYGIFALVLTPTRE 60
Query: 86 LAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTF 145
LA+QI DQF +GK +NL+ +I GGMDM+ QG EL+K+PHIV+ATPGRLADHLD+CNTF
Sbjct: 61 LAFQIADQFAAIGKAINLKKCVIVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCNTF 120
Query: 146 SLNRIKFLVLDEADRL 161
SL RIKFLVLDEADRL
Sbjct: 121 SLKRIKFLVLDEADRL 136
>gi|405961989|gb|EKC27711.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
gi|405977898|gb|EKC42325.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
Length = 464
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/156 (68%), Positives = 127/156 (81%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F L LN WL QC +G++ PT IQ IP +L +DCIGCAKTGSGKT AFALPIL
Sbjct: 16 EHFEKLGLNEWLWTQCHNMGLRQPTPIQVNCIPPILEGKDCIGCAKTGSGKTAAFALPIL 75
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK EDP+GIFALVLTPTRELA+QI +QF VLGK +N+RV++ITGG+DM+ QG +L KP
Sbjct: 76 QKLSEDPFGIFALVLTPTRELAFQIAEQFNVLGKPINVRVTVITGGLDMMQQGIDLQVKP 135
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIVI+TPGRLADHL +C+TFSL +IKFLVLDEADRL
Sbjct: 136 HIVISTPGRLADHLQSCDTFSLRKIKFLVLDEADRL 171
>gi|291231214|ref|XP_002735561.1| PREDICTED: Ddx49-A-prov protein-like [Saccoglossus kowalevskii]
Length = 445
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/162 (64%), Positives = 131/162 (80%), Gaps = 1/162 (0%)
Query: 1 MEDPIKS-FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLA 59
+ED + + F+ L LN WL++QC+ +G+ PT IQ IP +L DC+GCAKTGSGKT A
Sbjct: 6 LEDGVNAKFSSLGLNDWLVKQCKAVGITKPTPIQYYCIPQILEGVDCLGCAKTGSGKTAA 65
Query: 60 FALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
FALPILQK CEDPYGI+ALVLTPTRELA+QI +QF +LGK + L+ ++I GG D++ QG
Sbjct: 66 FALPILQKLCEDPYGIYALVLTPTRELAFQIAEQFRILGKPIGLKDAVIIGGRDVMRQGM 125
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+LA KPH+VIATPGRLADH+++ NTFSL +IKFLVLDEADRL
Sbjct: 126 DLADKPHVVIATPGRLADHINSSNTFSLKKIKFLVLDEADRL 167
>gi|169234830|ref|NP_001108495.1| probable ATP-dependent RNA helicase DDX49 [Rattus norvegicus]
gi|165971701|gb|AAI58856.1| Ddx49 protein [Rattus norvegicus]
Length = 480
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 124/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L+L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTF++ +I+FLVLDEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFNMKKIRFLVLDEADRL 157
>gi|357618886|gb|EHJ71689.1| hypothetical protein KGM_12880 [Danaus plexippus]
Length = 533
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 128/160 (80%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K F +L + WLI Q T+G+KTPT IQK IP++L+ +DCIG AKTGSGKT AFA
Sbjct: 3 ENVGKDFEELGVKRWLINQLITLGIKTPTPIQKGCIPNILSGQDCIGAAKTGSGKTFAFA 62
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ EDPYGIFALVLTPT ELAYQI DQFL+LG+ + LRV I+TGG D +++ +L
Sbjct: 63 LPILQNLAEDPYGIFALVLTPTHELAYQIADQFLILGQPLKLRVCIVTGGSDQLEESLKL 122
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AK+PHIV+A PGRLADH+ C+TFSL +IK+LVLDEADRL
Sbjct: 123 AKRPHIVVAMPGRLADHISGCDTFSLKKIKYLVLDEADRL 162
>gi|149036001|gb|EDL90667.1| rCG38846 [Rattus norvegicus]
Length = 497
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 124/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L+L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTF++ +I+FLVLDEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFNMKKIRFLVLDEADRL 157
>gi|444726610|gb|ELW67134.1| putative ATP-dependent RNA helicase DDX49 [Tupaia chinensis]
Length = 479
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ RI+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKRIRFLVMDEADRL 157
>gi|402904855|ref|XP_003915254.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Papio anubis]
Length = 483
Score = 221 bits (564), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QCQ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MSGFAELGLSSWLVAQCQQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|321466431|gb|EFX77426.1| hypothetical protein DAPPUDRAFT_213372 [Daphnia pulex]
Length = 478
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 125/157 (79%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F LK++ WLI+Q + +GV PT +Q IP +L+ DCIGC +TGSGKT AFALPI
Sbjct: 8 VSTFNSLKIDEWLIKQIKNLGVDKPTPVQINCIPAILDGRDCIGCDRTGSGKTFAFALPI 67
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+Q +DPYGI+ALVLTPTRELAYQI DQF ++GK +NLR+S+I GGM M+DQG EL+
Sbjct: 68 VQTLSKDPYGIYALVLTPTRELAYQIADQFQIIGKPINLRMSVIVGGMGMMDQGIELSNH 127
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIVIATPGRLADHL++C TFS IK+LV+DEADRL
Sbjct: 128 PHIVIATPGRLADHLESCKTFSFKTIKYLVMDEADRL 164
>gi|440904005|gb|ELR54578.1| Putative ATP-dependent RNA helicase DDX49, partial [Bos grunniens
mutus]
Length = 486
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 4 MAGFAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 63
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 64 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 123
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 124 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 160
>gi|57101724|ref|XP_541930.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Canis lupus familiaris]
Length = 488
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 122/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|395847961|ref|XP_003796632.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Otolemur
garnettii]
Length = 483
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGHDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKECIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|31542656|ref|NP_061943.2| probable ATP-dependent RNA helicase DDX49 [Homo sapiens]
gi|350538363|ref|NP_001233517.1| probable ATP-dependent RNA helicase DDX49 [Pan troglodytes]
gi|397493813|ref|XP_003817790.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Pan paniscus]
gi|74753527|sp|Q9Y6V7.1|DDX49_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX49; AltName:
Full=DEAD box protein 49
gi|2443870|gb|AAB81544.1| R27090_2 [Homo sapiens]
gi|12803677|gb|AAH02674.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapiens]
gi|119605165|gb|EAW84759.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49, isoform CRA_b [Homo
sapiens]
gi|312152524|gb|ADQ32774.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [synthetic construct]
gi|343960719|dbj|BAK61949.1| probable ATP-dependent RNA helicase DDX49 [Pan troglodytes]
gi|410219928|gb|JAA07183.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410255310|gb|JAA15622.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410295734|gb|JAA26467.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
gi|410333447|gb|JAA35670.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Pan troglodytes]
Length = 483
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|281343550|gb|EFB19134.1| hypothetical protein PANDA_000569 [Ailuropoda melanoleuca]
Length = 457
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 122/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|426228752|ref|XP_004008460.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Ovis aries]
Length = 483
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ I+ GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSMKKIRFLVMDEADRL 157
>gi|311249349|ref|XP_003123587.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Sus scrofa]
Length = 483
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|431922034|gb|ELK19207.1| Putative ATP-dependent RNA helicase DDX49 [Pteropus alecto]
Length = 483
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 122/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|297704172|ref|XP_002828993.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Pongo abelii]
Length = 483
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|301753949|ref|XP_002912858.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Ailuropoda melanoleuca]
Length = 477
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|239789755|dbj|BAH71480.1| ACYPI008863 [Acyrthosiphon pisum]
Length = 154
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 127/152 (83%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ +L Q + +GV +PTEIQK IP +L+ DCIGCAKTGSGKTLAFALPILQ
Sbjct: 2 NFENLNLSKYLCDQLKAVGVNSPTEIQKNCIPKILDGIDCIGCAKTGSGKTLAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E+PYGIFAL+LTPTRELAYQI DQF V+GK NLR ++TGGM+M+ Q +EL+ KPH
Sbjct: 62 KLWEEPYGIFALILTPTRELAYQIADQFAVIGKPKNLRHCVVTGGMEMIVQARELSNKPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEA 158
IV++TPGRLADHL++C+TFSL RI+FLVLDEA
Sbjct: 122 IVVSTPGRLADHLESCDTFSLKRIQFLVLDEA 153
>gi|332253514|ref|XP_003275885.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Nomascus
leucogenys]
Length = 483
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|156389591|ref|XP_001635074.1| predicted protein [Nematostella vectensis]
gi|156222164|gb|EDO43011.1| predicted protein [Nematostella vectensis]
Length = 436
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 127/168 (75%), Gaps = 3/168 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L LN WL+ QC +G+K PTEIQ +P +L DCIGCAKTGSGKT AFALPILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K C+DPYGIFA+VLTPTRELA+QI DQF VLG+ + L+ ++I GG+DM+ Q LA KPH
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPH 127
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
+VIATPGRLADH+ + +T +L +I+FLVLDEADRL S LK F
Sbjct: 128 VVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIF 175
>gi|410950898|ref|XP_003982139.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Felis catus]
Length = 483
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 121/154 (78%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FASLGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 124 VIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|49903707|gb|AAH75762.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 125/155 (80%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ WLI+QC+ +G+ PT +Q+ IP +L+ DC+GCAKTGSGKT AF LP+LQ
Sbjct: 3 TFESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYG+F LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV QG EL+KKPH
Sbjct: 63 KLSEDPYGVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRLADH+ + +T +LNRI+FL++DEADRL
Sbjct: 123 VVVATPGRLADHIRSSDTINLNRIQFLIMDEADRL 157
>gi|355755632|gb|EHH59379.1| Putative ATP-dependent RNA helicase DDX49 [Macaca fascicularis]
Length = 483
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MSGFAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|380786067|gb|AFE64909.1| putative ATP-dependent RNA helicase DDX49 [Macaca mulatta]
Length = 483
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MSGFAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|38198641|ref|NP_938179.1| probable ATP-dependent RNA helicase DDX49 [Danio rerio]
gi|28839770|gb|AAH47834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 125/155 (80%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ WLI+QC+ +G+ PT +Q+ IP +L+ DC+GCAKTGSGKT AF LP+LQ
Sbjct: 3 TFESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYG+F LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV QG EL+KKPH
Sbjct: 63 KLSEDPYGVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRLADH+ + +T +LNRI+FL++DEADRL
Sbjct: 123 VVVATPGRLADHIRSSDTINLNRIQFLIMDEADRL 157
>gi|62898149|dbj|BAD97014.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 variant [Homo sapiens]
Length = 483
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPVILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|355703340|gb|EHH29831.1| Putative ATP-dependent RNA helicase DDX49 [Macaca mulatta]
Length = 483
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MSGFAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|149639080|ref|XP_001509561.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Ornithorhynchus anatinus]
Length = 332
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 123/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL+ QCQ +G++ PT +Q++ +P +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FGALGLAPWLVEQCQQLGLRQPTPVQQSCVPAILEGRDCMGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ I+ GGMDMV Q +L++KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALDLSRKPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADHL + +TFS+ +I+FLV+DEADRL
Sbjct: 124 VIATPGRLADHLRSSSTFSIKKIRFLVMDEADRL 157
>gi|149757285|ref|XP_001503455.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 1
[Equus caballus]
Length = 483
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + +TFS+ +I+FLVLDEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSSTFSIKKIRFLVLDEADRL 157
>gi|417401748|gb|JAA47742.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 483
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 122/157 (77%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIHFLVMDEADRL 157
>gi|109124055|ref|XP_001115617.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Macaca
mulatta]
Length = 527
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MSGFAELGLSSWLVAQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|67972435|ref|NP_001020093.2| probable ATP-dependent RNA helicase DDX49 [Mus musculus]
gi|76364172|sp|Q4FZF3.1|DDX49_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX49; AltName:
Full=DEAD box protein 49
gi|71051022|gb|AAH99554.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Mus musculus]
Length = 480
Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F ++ L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTF++ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRL 157
>gi|344283067|ref|XP_003413294.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Loxodonta
africana]
Length = 481
Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 122/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRKPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADHL + +TFS+ +I+FLVLDEADRL
Sbjct: 124 VIATPGRLADHLRSSSTFSIKKIRFLVLDEADRL 157
>gi|403303461|ref|XP_003942345.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Saimiri
boliviensis boliviensis]
Length = 483
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 122/157 (77%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAQLGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GG+DMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGLDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|148696858|gb|EDL28805.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Mus musculus]
Length = 545
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F ++ L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 5 MAGFAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 64
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 65 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 124
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTF++ +I+FLV+DEADRL
Sbjct: 125 PHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRL 161
>gi|348558702|ref|XP_003465155.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Cavia
porcellus]
Length = 477
Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 101/155 (65%), Positives = 121/155 (78%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQ
Sbjct: 3 GFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH
Sbjct: 63 KLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRLADHL + NTF + +I+FLV+DEADRL
Sbjct: 123 VVIATPGRLADHLRSSNTFHIKKIRFLVMDEADRL 157
>gi|354473856|ref|XP_003499148.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Cricetulus
griseus]
gi|344241323|gb|EGV97426.1| putative ATP-dependent RNA helicase DDX49 [Cricetulus griseus]
Length = 480
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 122/157 (77%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILQGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NT ++ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTLNMKKIRFLVMDEADRL 157
>gi|395513190|ref|XP_003760812.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Sarcophilus
harrisii]
Length = 509
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 123/155 (79%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L L WL+ QC+ +G+K PT +Q+ +P +L DC+GCAKTGSGKT AF LPILQ
Sbjct: 3 SFAELGLASWLVAQCKQLGLKHPTPVQQNCVPAILEGRDCMGCAKTGSGKTAAFVLPILQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH
Sbjct: 63 KLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKECIIVGGMDMVAQALELSRKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRLADHL + +TF++ +I+FLV+DEADRL
Sbjct: 123 VVIATPGRLADHLRSSSTFNIKKIRFLVMDEADRL 157
>gi|74224046|dbj|BAE23880.1| unnamed protein product [Mus musculus]
Length = 309
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F ++ L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTF++ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRL 157
>gi|158257264|dbj|BAF84605.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 122/157 (77%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVDGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|7022460|dbj|BAA91606.1| unnamed protein product [Homo sapiens]
Length = 257
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKKPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI ++F VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAERFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 121/154 (78%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTDL L+ WL +QC +G+ PTEIQ + IP +L+ DCIG AKTGSGKT AFALPI+QK
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEILSGRDCIGSAKTGSGKTAAFALPIIQK 64
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIFAL+LTPTRELA QI DQF LGK + L ++I GG+DMV QG EL+ +PH+
Sbjct: 65 LSEDPYGIFALILTPTRELAIQIADQFKALGKSIGLNDAVIIGGLDMVKQGMELSNQPHV 124
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLA H+ + FSLN+IKFLVLDEADRL
Sbjct: 125 VIATPGRLASHITSGTKFSLNKIKFLVLDEADRL 158
>gi|449692609|ref|XP_004213103.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like, partial
[Hydra magnipapillata]
Length = 208
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 121/154 (78%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTDL L+ WL +QC +G+ PTEIQ + IP +L+ DCIG AKTGSGKT AFALPI+QK
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEILSGRDCIGSAKTGSGKTAAFALPIIQK 64
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIFAL+LTPTRELA QI DQF LGK + L ++I GG+DMV QG EL+ +PH+
Sbjct: 65 LSEDPYGIFALILTPTRELAIQIADQFKALGKSIGLNDAVIIGGLDMVKQGMELSNQPHV 124
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLA H+ + FSLN+IKFLVLDEADRL
Sbjct: 125 VIATPGRLASHITSGTKFSLNKIKFLVLDEADRL 158
>gi|348523239|ref|XP_003449131.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Oreochromis
niloticus]
Length = 480
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 122/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+ L L+ WL++QC+ +G+ PT +Q+ +P +L DC+GCAKTGSGKT AF LP+LQK
Sbjct: 4 FSSLGLSDWLVKQCKQLGINKPTPVQENCMPAILQGRDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL+ +PH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSNQPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRLADH+ + NTFS+ RI+FL+LDEADRL
Sbjct: 124 VVATPGRLADHIRSSNTFSMKRIQFLILDEADRL 157
>gi|432854582|ref|XP_004067972.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Oryzias
latipes]
Length = 469
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 122/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL++QC+ +G+ PT +Q+ +P +L DC+GCAKTGSGKT AF LP+LQK
Sbjct: 4 FHSLGLSDWLVKQCKQLGIDKPTPVQENCVPAILEGRDCLGCAKTGSGKTAAFVLPVLQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ I+ GGMDMV Q EL+K+PH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALELSKQPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRLADH+ + NTFS+ +IKFL+LDEADRL
Sbjct: 124 VVATPGRLADHVRSSNTFSMRKIKFLILDEADRL 157
>gi|126323567|ref|XP_001370574.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Monodelphis
domestica]
Length = 491
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 121/155 (78%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
F L L WL+ QC+ +G+K PT +Q+ +P +L DC+GCAKTGSGKT AF LPILQ
Sbjct: 3 EFAKLGLASWLVAQCRQLGLKHPTPVQQNCVPAILEGRDCMGCAKTGSGKTAAFVLPILQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDP+GIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH
Sbjct: 63 KLSEDPFGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRLADHL + NTF++ +I+FLV+DEADRL
Sbjct: 123 VVIATPGRLADHLRSSNTFNIKKIRFLVMDEADRL 157
>gi|47217410|emb|CAG00770.1| unnamed protein product [Tetraodon nigroviridis]
Length = 456
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 123/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+ L L+ WL++QC+ +G+ PT +Q+ +P +L DC+GCAKTGSGKT AF LP+LQK
Sbjct: 4 FSSLGLSDWLVKQCKQLGIHKPTPVQENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + LR I+ GGMDMV Q EL+ +PH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIVVGGMDMVSQASELSNQPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRLADH+ + +TFS+++I+FL++DEADRL
Sbjct: 124 VVATPGRLADHIRSSSTFSMSKIQFLIMDEADRL 157
>gi|326934515|ref|XP_003213334.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Meleagris gallopavo]
Length = 482
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 121/155 (78%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L PWL+ Q + +G+ PT +Q + IP +L DC+GCAKTGSGKT AF LP+LQ
Sbjct: 3 AFRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ ++ GG+DMV Q EL++KPH
Sbjct: 63 VLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRLADHL + NTFSL ++KFLVLDEADRL
Sbjct: 123 VVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRL 157
>gi|45361669|ref|NP_989409.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
gi|40787696|gb|AAH64887.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Xenopus (Silurana)
tropicalis]
Length = 479
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
++ F+ L L+ WLI QC +G+ P+ +Q+ IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MEGFSRLGLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDP+GIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPFGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADH+ + NTFS+ +I+FLVLDEADRL
Sbjct: 121 PHVVIATPGRLADHIRSSNTFSIKKIRFLVLDEADRL 157
>gi|29612573|gb|AAH49396.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 482
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
++ F+ L L+ WLI QC +G+ P+ +Q+ IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 4 MEGFSSLGLSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPI 63
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDP+GIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 64 LQKLSEDPFGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIIGGMDMVAQALELSRK 123
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIVIATPGRLADH+ + NTFS+ +I+FLV+DEADRL
Sbjct: 124 PHIVIATPGRLADHIRSSNTFSIKKIRFLVMDEADRL 160
>gi|71896415|ref|NP_001026109.1| probable ATP-dependent RNA helicase DDX49 [Gallus gallus]
gi|53130312|emb|CAG31485.1| hypothetical protein RCJMB04_6o15 [Gallus gallus]
Length = 402
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/157 (62%), Positives = 122/157 (77%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F +L L PWL+ Q + +G+ PT +Q + IP +L DC+GCAKTGSGKT AF LP+
Sbjct: 1 MAAFRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPV 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ ++ GG+DMV Q EL++K
Sbjct: 61 LQVLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFSL ++KFLVLDEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSLKKLKFLVLDEADRL 157
>gi|390478768|ref|XP_003735574.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX49 [Callithrix jacchus]
Length = 480
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 120/157 (76%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAQLGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GG+DMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGLDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + FS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSTLFSIKKIRFLVMDEADRL 157
>gi|410921858|ref|XP_003974400.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Takifugu
rubripes]
Length = 477
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 122/154 (79%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+ L L+ WLI+QC+ +G++ T +Q+ +P +L DC+GCAKTGSGKT AF LP+LQK
Sbjct: 4 FSSLGLSDWLIKQCKQLGIQKATPVQENCVPAILQGRDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL+ +PH+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSNQPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRLADH+ + +TFSL +I+FL++DEADRL
Sbjct: 124 VVATPGRLADHIRSSSTFSLAKIQFLIMDEADRL 157
>gi|355683302|gb|AER97082.1| DEAD box polypeptide 49 [Mustela putorius furo]
Length = 469
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 116/145 (80%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK EDPYGIF
Sbjct: 1 LVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIF 60
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPH+VIATPGRLA
Sbjct: 61 CLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLA 120
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 DHLRSSNTFSIKKIRFLVMDEADRL 145
>gi|225710224|gb|ACO10958.1| Probable ATP-dependent RNA helicase DDX49 [Caligus rogercresseyi]
Length = 454
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Query: 11 LKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCE 70
L L PWL +QC+ IG+K+P+ +Q+ +P +L+ ++ IG AKTGSGKT AFALPIL E
Sbjct: 4 LGLKPWLSKQCEAIGLKSPSPVQRETVPKILDGQNGIGIAKTGSGKTAAFALPILDALSE 63
Query: 71 DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIA 130
DPYGI+ALVLTPTRELAYQI D F +LGK +N++VSII GG DMV QG ELA PHIVIA
Sbjct: 64 DPYGIYALVLTPTRELAYQIADTFKILGKPLNVKVSIIIGGRDMVLQGSELASSPHIVIA 123
Query: 131 TPGRLADHLDTCNTFS-LNRIKFLVLDEADRL 161
TPGRLADHL+T + S L +IKFLV+DEADRL
Sbjct: 124 TPGRLADHLNTHSQSSPLKKIKFLVIDEADRL 155
>gi|328773329|gb|EGF83366.1| hypothetical protein BATDEDRAFT_8371 [Batrachochytrium
dendrobatidis JAM81]
Length = 460
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F + L PWLI ++I ++ P+EIQ+A IPH+LN D IG AKTGSGKT AFALPILQ
Sbjct: 34 TFESIGLRPWLIGSLKSISIRHPSEIQQACIPHILNGRDIIGGAKTGSGKTAAFALPILQ 93
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYG+FALVLTP RELA+QI +QF VLG +NL++S++ GGMDM+ Q EL++KPH
Sbjct: 94 KLSEDPYGVFALVLTPARELAFQIAEQFRVLGTGINLKLSVVVGGMDMMSQALELSQKPH 153
Query: 127 IVIATPGRLADHL-DTCNTFSLNRIKFLVLDEADRL 161
++IATPGRL DH+ + N RI+FLV+DEADRL
Sbjct: 154 VIIATPGRLVDHIRSSSNAIHFKRIRFLVMDEADRL 189
>gi|225710312|gb|ACO11002.1| Probable ATP-dependent RNA helicase DDX49 [Caligus rogercresseyi]
Length = 454
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Query: 11 LKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCE 70
L L PWL +QC+ IG+K+P +Q+ +P +L+ ++ IG AKTGSGKT AFALPIL E
Sbjct: 4 LGLKPWLSKQCEAIGLKSPAPVQRETVPKILDGQNGIGIAKTGSGKTAAFALPILDALSE 63
Query: 71 DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIA 130
DPYGI+ALVLTPTRELAYQI D F +LGK +N++VSII GG DMV QG ELA PHIVIA
Sbjct: 64 DPYGIYALVLTPTRELAYQIADTFKILGKPLNVKVSIIIGGRDMVLQGSELASSPHIVIA 123
Query: 131 TPGRLADHLDTCNTFS-LNRIKFLVLDEADRL 161
TPGRLADHL+T + S L +IKFLV+DEADRL
Sbjct: 124 TPGRLADHLNTHSQSSPLKKIKFLVIDEADRL 155
>gi|47937760|gb|AAH72323.1| Ddx49-A-prov protein, partial [Xenopus laevis]
Length = 429
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 118/149 (79%)
Query: 13 LNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDP 72
L+ WLI QC +G+ P+ +Q+ IP +L DC+GCAKTGSGKT AF LPILQK EDP
Sbjct: 15 LSSWLIDQCSQLGILKPSPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPILQKLSEDP 74
Query: 73 YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATP 132
+GIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++KPHIVIATP
Sbjct: 75 FGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIIGGMDMVAQALELSRKPHIVIATP 134
Query: 133 GRLADHLDTCNTFSLNRIKFLVLDEADRL 161
GRLADH+ + NTFS+ +I+FLV+DEADRL
Sbjct: 135 GRLADHIRSSNTFSIKKIRFLVMDEADRL 163
>gi|13161879|emb|CAC33024.1| hypothetical protein [Takifugu rubripes]
Length = 476
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 120/154 (77%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+ L L+ WLI+QC+ +G++ T +Q+ +P +L DC+GCAKTGSGKT AF LP+LQK
Sbjct: 4 FSSLGLSDWLIKQCKQLGIQKATPVQENCVPAILQGSDCMGCAKTGSGKTAAFVLPVLQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYGIF LVLTPTR LAYQI +QF VLGK + L+ II GGM MV Q EL+ +PH+
Sbjct: 64 LSEDPYGIFCLVLTPTRSLAYQIAEQFRVLGKPLGLKDCIIVGGMGMVTQALELSNQPHV 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRLADH+ + +TFSL +I+FLV+DEADRL
Sbjct: 124 VVATPGRLADHIRSSSTFSLAKIQFLVMDEADRL 157
>gi|320168199|gb|EFW45098.1| DEAD box polypeptide 49 [Capsaspora owczarzaki ATCC 30864]
Length = 611
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 94/155 (60%), Positives = 120/155 (77%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L WL++QC+ +G+K PT+IQ I HVL + IGCAKTGSGKT AFALPIL
Sbjct: 179 TFAALGLKQWLVKQCEAMGLKHPTDIQVNTIKHVLAGRNVIGCAKTGSGKTAAFALPILH 238
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +DPYG FA+VLTPTRELA+QI +QF LGK +NLR +++ GG+DM+ Q LAK+PH
Sbjct: 239 RLSDDPYGPFAVVLTPTRELAFQIAEQFRALGKGINLREAVVVGGVDMMQQSLVLAKRPH 298
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++IATPGRLADHL++ + SL R +FLVLDEADRL
Sbjct: 299 VIIATPGRLADHLNSNSQLSLARARFLVLDEADRL 333
>gi|392593043|gb|EIW82369.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 575
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 97/157 (61%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF D+ ++ LI + ++TPTEIQ A IP +LN DCIG A+TGSGKT+AFA+PIL
Sbjct: 109 KSFADMDIHQSLISTLSRMSIRTPTEIQAACIPPLLNGRDCIGNAQTGSGKTIAFAIPIL 168
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK +DPYGIFALVLTPTRELA+QIG+QF VLG +++R S+I GGMDM+ Q EL +P
Sbjct: 169 QKLADDPYGIFALVLTPTRELAFQIGEQFAVLGAPLSVRTSVIVGGMDMMAQALELDARP 228
Query: 126 HIVIATPGRLADHL-DTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGR+ DHL + +SL R K+LVLDEADRL
Sbjct: 229 HIVVATPGRMVDHLRSSSGQWSLARTKYLVLDEADRL 265
>gi|336373626|gb|EGO01964.1| hypothetical protein SERLA73DRAFT_49383 [Serpula lacrymans var.
lacrymans S7.3]
Length = 474
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ L+ + ++TPTEIQ A IP +L+ DCIG AKTGSGKT+AFALPILQ
Sbjct: 42 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLLSGRDCIGNAKTGSGKTIAFALPILQ 101
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFALVLTPTRELA+QI DQF VLG +++R ++I GGMDM+ Q EL +PH
Sbjct: 102 KLSEDPYGIFALVLTPTRELAFQISDQFAVLGAGLSIRTAVIVGGMDMMTQALELDNRPH 161
Query: 127 IVIATPGRLADHL-DTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGR+ DHL + +SL+RIKFLVLDEADRL
Sbjct: 162 VVVATPGRIVDHLRSSSGEWSLSRIKFLVLDEADRL 197
>gi|340376506|ref|XP_003386773.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Amphimedon queenslandica]
Length = 441
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 118/155 (76%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+ L L+ WL+RQC+ +G K T +QK IP ++ DCIG AKTGSGKT AFALPIL
Sbjct: 6 TFSSLGLSSWLVRQCEGLGFKEATPVQKNCIPPIMEGRDCIGSAKTGSGKTAAFALPILH 65
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
DPYGI+ALVLTPTRELAYQI DQF VLGK + ++ +I GG+DM+ Q L+++PH
Sbjct: 66 SLSRDPYGIYALVLTPTRELAYQISDQFCVLGKHIGVKSEVIVGGVDMMVQALALSRRPH 125
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADHL + +T + +IK+LVLDEADRL
Sbjct: 126 IVVATPGRLADHLQSTDTVFMEKIKYLVLDEADRL 160
>gi|336386445|gb|EGO27591.1| hypothetical protein SERLADRAFT_360268 [Serpula lacrymans var.
lacrymans S7.9]
Length = 520
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ L+ + ++TPTEIQ A IP +L+ DCIG AKTGSGKT+AFALPILQ
Sbjct: 79 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLLSGRDCIGNAKTGSGKTIAFALPILQ 138
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIFALVLTPTRELA+QI DQF VLG +++R ++I GGMDM+ Q EL +PH
Sbjct: 139 KLSEDPYGIFALVLTPTRELAFQISDQFAVLGAGLSIRTAVIVGGMDMMTQALELDNRPH 198
Query: 127 IVIATPGRLADHLDTCN-TFSLNRIKFLVLDEADRL 161
+V+ATPGR+ DHL + + +SL+RIKFLVLDEADRL
Sbjct: 199 VVVATPGRIVDHLRSSSGEWSLSRIKFLVLDEADRL 234
>gi|196002119|ref|XP_002110927.1| hypothetical protein TRIADDRAFT_21982 [Trichoplax adhaerens]
gi|190586878|gb|EDV26931.1| hypothetical protein TRIADDRAFT_21982 [Trichoplax adhaerens]
Length = 435
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 119/155 (76%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL LN WL++QC+ IG+ T +Q+ IP +L ++CIGCAKTGSGKT AFALPILQ
Sbjct: 6 SFADLGLNTWLVKQCRAIGLAKATAVQEKCIPPILQGQNCIGCAKTGSGKTAAFALPILQ 65
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++P+GI+AL+LTPTRELA+Q+ DQF GK + +R +I+ GG+D++ Q L+KKPH
Sbjct: 66 NLAKEPFGIYALILTPTRELAFQLADQFRAFGKPIGMRDAIVIGGLDIISQSIALSKKPH 125
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IVIATPGRLAD +D + ++IKFLVLDEADRL
Sbjct: 126 IVIATPGRLADLIDNDSKVHFSKIKFLVLDEADRL 160
>gi|198427069|ref|XP_002129152.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
[Ciona intestinalis]
Length = 452
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 116/155 (74%), Gaps = 4/155 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL LN W+I+ +G PT IQ IP +L +DC GC+KTGSGKT AFALP+LQ
Sbjct: 6 NFADLGLNEWIIQHLGNLGFNKPTPIQYNCIPPILQGKDCFGCSKTGSGKTAAFALPVLQ 65
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDPYGIF LVLTPTRELAYQI +QF ++GK +N+R S+I GGMD++ Q EL KKPH
Sbjct: 66 KLSEDPYGIFCLVLTPTRELAYQISEQFTLIGKPINIRTSVIVGGMDIIQQAYELQKKPH 125
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IVIATPGRLAD L + + N +KFLVLDEADRL
Sbjct: 126 IVIATPGRLADLLRS----NENNVKFLVLDEADRL 156
>gi|391330997|ref|XP_003739937.1| PREDICTED: ATP-dependent RNA helicase DRS1-like [Metaseiulus
occidentalis]
Length = 972
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 90/165 (54%), Positives = 127/165 (76%), Gaps = 7/165 (4%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ IK+F +LKL+ WL+ + + I +++P+ +Q+ +P +L DC+ CAKTGSGKTLAFA
Sbjct: 14 DNKIKTFKELKLSDWLLERLKIISIQSPSPVQRNCVPEILKGRDCLACAKTGSGKTLAFA 73
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP+L+K +PYGIFAL+L+PTRELA QI +QF +LGK +NL+ ++ GG D+VDQG+EL
Sbjct: 74 LPVLEKLFREPYGIFALILSPTRELAIQIAEQFRILGKKVNLKDCLVVGGTDIVDQGREL 133
Query: 122 AKKPHIVIATPGRLADHLDTCNT-----FSLNRIKFLVLDEADRL 161
A++PHIV+ATPGRLADHLD FS +I+ L+LDEAD+L
Sbjct: 134 AQRPHIVVATPGRLADHLDFAAEDMKPLFS--KIQMLILDEADQL 176
>gi|389747190|gb|EIM88369.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 554
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 119/156 (76%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L ++P LI + ++ PTEIQ A IP +L EDCIG AKTGSGKT+AFALPILQ
Sbjct: 98 TFASLDISPPLISALSKLAIRAPTEIQLACIPPLLAGEDCIGNAKTGSGKTIAFALPILQ 157
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K DPYGI+ALVLTPTRELA+QI +QF VLG +N+R ++I GGMDM+ Q EL ++PH
Sbjct: 158 KLSMDPYGIYALVLTPTRELAFQISEQFAVLGAHLNIRTAVIVGGMDMMTQALELGRRPH 217
Query: 127 IVIATPGRLADHL-DTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRL DHL + + L+R+KFLVLDEADRL
Sbjct: 218 VVIATPGRLVDHLRSSSGEWDLSRVKFLVLDEADRL 253
>gi|339243587|ref|XP_003377719.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
gi|316973448|gb|EFV57036.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
Length = 563
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 119/156 (76%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
S DL L+ WL+ QC +G+ P+ +Q IP +L +D IGC+KTG+GKTLAFA+PI+Q
Sbjct: 106 SLHDLGLSSWLVEQCAVMGIVEPSPVQLNCIPEILIGKDAIGCSKTGTGKTLAFAIPIIQ 165
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ EDPYGI+ALVLTP+RELA+QIG+QF VLGK + LR SI+ GG DM++Q E+A +PH
Sbjct: 166 RLSEDPYGIYALVLTPSRELAFQIGEQFQVLGKPLGLRTSIVVGGRDMIEQANEIANQPH 225
Query: 127 IVIATPGRLADH-LDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRLADH L + ++IKF VLDEADRL
Sbjct: 226 ILIATPGRLADHILSRSDENWFHKIKFFVLDEADRL 261
>gi|158292622|ref|XP_314012.3| AGAP005130-PA [Anopheles gambiae str. PEST]
gi|157017078|gb|EAA09455.3| AGAP005130-PA [Anopheles gambiae str. PEST]
Length = 531
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 117/156 (75%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F+DL L W+ RQ + +G++ PT IQ IP +L +DCIG AKTGSGKT AFALPIL
Sbjct: 7 KKFSDLGLTYWITRQTEKLGLRRPTPIQVECIPRILQGQDCIGAAKTGSGKTFAFALPIL 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK E+P FALVLTPT ELA+QI +QF+V G+ MN RV ++TGG D + + ++L K+P
Sbjct: 67 QKLSEEPTANFALVLTPTHELAHQIAEQFIVAGQPMNARVCVVTGGTDYLIESQQLEKRP 126
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++A PGRLADHL CNT+S ++FLV+DEADR+
Sbjct: 127 HIIVAMPGRLADHLTGCNTYSFAALQFLVVDEADRM 162
>gi|170090862|ref|XP_001876653.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648146|gb|EDR12389.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 118/156 (75%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L ++ L ++ +KTPTE+Q A IP +L DCIG AKTGSGKT+AFALPILQ
Sbjct: 1 SFASLGISDSLQSALTSMSIKTPTEVQAACIPPLLAGTDCIGNAKTGSGKTIAFALPILQ 60
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DPYGI+ALVLTPTRELA+QI +QF+VLG +NLR ++I GGMDM+ Q EL +PH
Sbjct: 61 RLLADPYGIYALVLTPTRELAFQISEQFVVLGASLNLRTAVIVGGMDMMAQALELGNRPH 120
Query: 127 IVIATPGRLADHL-DTCNTFSLNRIKFLVLDEADRL 161
IVIATPGRL DHL + + L+R++FLVLDEADRL
Sbjct: 121 IVIATPGRLVDHLRSSSGEWDLSRVRFLVLDEADRL 156
>gi|342321531|gb|EGU13464.1| ATP-dependent RNA helicase DBP8 [Rhodotorula glutinis ATCC 204091]
Length = 1449
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/156 (58%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + P+L + Q + ++ PT +Q A IP +L DCIG A+TGSGKT+AFALPI+Q
Sbjct: 47 TFASLGVEPFLCKALQAMAIRKPTGVQAACIPQILAGADCIGSAQTGSGKTIAFALPIMQ 106
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
DPYG+F +VLTPTRELA+QIG+QF VLG MNL ++I GGMDM+ Q EL K+PH
Sbjct: 107 ALSRDPYGVFGVVLTPTRELAFQIGEQFRVLGAAMNLHSTVIVGGMDMMHQAIELRKQPH 166
Query: 127 IVIATPGRLADHLDTCN-TFSLNRIKFLVLDEADRL 161
I+IATPGRL D + + FSL R+KFLVLDEADRL
Sbjct: 167 IIIATPGRLVDLMKSNQGEFSLGRVKFLVLDEADRL 202
>gi|448103925|ref|XP_004200160.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
gi|359381582|emb|CCE82041.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
Length = 437
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+DL + WL ++ + TPT IQKA IP VL DCIG AKTGSGKT+AFA PIL
Sbjct: 2 SFSDLGVAKWLCEALNSMKIYTPTAIQKACIPKVLKGHDCIGGAKTGSGKTIAFASPILT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDPYGI+ LVLTPTRELA QI +QF LG MN++V +I GG D+V Q EL ++PH
Sbjct: 62 KWSEDPYGIYGLVLTPTRELALQIAEQFAALGATMNIKVCVIVGGDDIVKQALELQRRPH 121
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R+K+LVLDEADRL
Sbjct: 122 IVIATPGRLADHILNSGEDTICGLRRVKYLVLDEADRL 159
>gi|157107875|ref|XP_001649978.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108868632|gb|EAT32857.1| AAEL014904-PA [Aedes aegypti]
Length = 526
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 116/156 (74%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F+DL L PW+ Q +G++ PT IQ+A IP +L+ +DCIG AKTGSGKT AFALPIL
Sbjct: 7 KKFSDLGLKPWIANQMDKLGLRRPTPIQEACIPRILDGQDCIGAAKTGSGKTFAFALPIL 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ E+P FALVLTPT ELAYQI +QF V G+ M+++V +ITGG D + + + L +P
Sbjct: 67 QRLSEEPTSNFALVLTPTHELAYQIAEQFSVAGQPMSVKVCVITGGTDQLLEAQRLQSRP 126
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+A PGRLA HL CNT+S ++FLV+DEADR+
Sbjct: 127 HIVVAMPGRLASHLTGCNTYSFRAMQFLVVDEADRV 162
>gi|195455578|ref|XP_002074783.1| GK23245 [Drosophila willistoni]
gi|194170868|gb|EDW85769.1| GK23245 [Drosophila willistoni]
Length = 506
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 118/155 (76%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L PWL +Q +G+K T IQK+ IP +L+ +DCIG AKTGSGKT AFALPIL+
Sbjct: 8 SFQALGLRPWLAKQLTKVGLKDATPIQKSCIPAILSGQDCIGAAKTGSGKTFAFALPILE 67
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PH
Sbjct: 68 KLSEEPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQMIESQKLMQRPH 127
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 128 IVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|19113586|ref|NP_596794.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654494|sp|Q9HGM5.1|DBP8_SCHPO RecName: Full=ATP-dependent RNA helicase dbp8
gi|9929273|emb|CAC05248.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe]
Length = 453
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 121/163 (74%), Gaps = 3/163 (1%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E KSF+DL ++PWLI + + + PT+IQ+ +I +L +CIG AKTGSGKT AFA
Sbjct: 3 EHTRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFA 62
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPI++KW +DP GIFAL+LTPTRELA QI +QF LG +NL+ ++I GGMDM+ Q +L
Sbjct: 63 LPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDL 122
Query: 122 AKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+K+PH+V+ATPGRLAD + + + L RIKFLV+DEADRL
Sbjct: 123 SKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRL 165
>gi|223590193|sp|A5DLE0.2|DBP8_PICGU RecName: Full=ATP-dependent RNA helicase DBP8
gi|190347673|gb|EDK39993.2| hypothetical protein PGUG_04091 [Meyerozyma guilliermondii ATCC
6260]
Length = 433
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 114/160 (71%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ WL+ + +++PT IQ IP +L DCIG AKTGSGKT+AFA P++
Sbjct: 2 SFKDLGVSKWLLEALAAMKIRSPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GI+ LVLTPTRELA QI +QFL LG MN++V+++ GG DMV Q E+ K PH
Sbjct: 62 KWSEDPFGIYGLVLTPTRELALQIAEQFLALGASMNIKVAVVVGGEDMVKQALEIQKSPH 121
Query: 127 IVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
+IATPGRLADH+ DT L RIKFLVLDEADRL
Sbjct: 122 FIIATPGRLADHILNSGDDTVG--GLKRIKFLVLDEADRL 159
>gi|448100218|ref|XP_004199301.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
gi|359380723|emb|CCE82964.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
Length = 437
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+DL + WL ++ + TPT IQKA IP VL DCIG AKTGSGKT+AFA PIL
Sbjct: 2 SFSDLGVGKWLCEALNSMKIYTPTAIQKACIPKVLKGHDCIGGAKTGSGKTIAFASPILT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDPYGI LVLTPTRELA QI +QF LG MN++V +I GG D+V Q EL ++PH
Sbjct: 62 KWSEDPYGICGLVLTPTRELALQIAEQFAALGATMNIKVCVIVGGDDIVKQALELQRRPH 121
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R+K+LVLDEADRL
Sbjct: 122 IVIATPGRLADHILNSGEDTICGLRRVKYLVLDEADRL 159
>gi|393246565|gb|EJD54074.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 595
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/159 (57%), Positives = 118/159 (74%), Gaps = 2/159 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L ++ LI + ++ PT +Q A IP +L +DCIG AKTGSGKT+AFALPI
Sbjct: 123 VGGFAALGVSQPLINALSAMSIRQPTAVQSACIPPLLAGKDCIGNAKTGSGKTIAFALPI 182
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ+ DPYGIFALVLTPTRELA+QI DQF VLG + +R +++ GGMDM+ Q EL +
Sbjct: 183 LQRLSVDPYGIFALVLTPTRELAFQIADQFAVLGGSLGIRTAVVVGGMDMMAQAIELCNR 242
Query: 125 PHIVIATPGRLADHLDTC--NTFSLNRIKFLVLDEADRL 161
PHIVIATPGR+ DHL++ + ++LNR+KFLVLDEADR+
Sbjct: 243 PHIVIATPGRMVDHLNSSSPDEWNLNRVKFLVLDEADRM 281
>gi|358056510|dbj|GAA97479.1| hypothetical protein E5Q_04157 [Mixia osmundae IAM 14324]
Length = 476
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L P+L R ++ ++ PTE+Q A IP +L DCIG A+TGSGKT+AFA PILQ
Sbjct: 2 SFDSLGLEPFLCRALDSMSIRKPTEVQAACIPPILQGRDCIGSAQTGSGKTIAFATPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
EDPYGIFALVLTPTRELA+QI DQF+ LG +NL+ +++ GG+DM+ Q L +PH
Sbjct: 62 ALAEDPYGIFALVLTPTRELAFQIADQFVALGTPINLQSTVVVGGLDMMAQATALRSRPH 121
Query: 127 IVIATPGRLADHLDTC-NTFSLNRIKFLVLDEADRL 161
+VIATPGRL D + + N FS R++FLVLDEADR+
Sbjct: 122 VVIATPGRLVDLMRSNQNEFSFARLRFLVLDEADRM 157
>gi|344230065|gb|EGV61950.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 114/162 (70%), Gaps = 7/162 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F +L + WL ++ + PT IQ A IP VL +DCIG AKTGSGKT+AF LP+
Sbjct: 1 MSTFHELGVADWLCESLNSMKIHKPTSIQAACIPEVLKGKDCIGGAKTGSGKTIAFGLPM 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L KW EDP+G++ LVLTPTRELA QI +QF +G MN+RV +I GG DM++Q + KK
Sbjct: 61 LHKWSEDPFGVYGLVLTPTRELALQIAEQFSAVGSSMNIRVKVIVGGEDMIEQALAIQKK 120
Query: 125 PHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
PH +IATPGRLADH+ DT N L RIKFLVLDEADRL
Sbjct: 121 PHFIIATPGRLADHILNSGEDTIN--GLRRIKFLVLDEADRL 160
>gi|170046083|ref|XP_001850610.1| ATP-dependent RNA helicase DBP8 [Culex quinquefasciatus]
gi|167868981|gb|EDS32364.1| ATP-dependent RNA helicase DBP8 [Culex quinquefasciatus]
Length = 516
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 116/156 (74%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F DL L PW+ +Q + +G++ PT IQ+A IP +L+ +DCIG AKTGSGKT AFALPIL
Sbjct: 7 QKFADLGLKPWITKQLEKLGLRRPTPIQQACIPRILDGQDCIGAAKTGSGKTFAFALPIL 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ E+P FAL+LTPT ELAYQI +QF V G+ M ++V ++TGG D + + + L +P
Sbjct: 67 QRLSEEPTSNFALILTPTHELAYQIAEQFSVAGQPMGVKVCVVTGGTDQLLEAQRLQARP 126
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+A PGRLA HL CNT+S ++FLV+DEADR+
Sbjct: 127 HIVVAMPGRLAAHLTGCNTYSFRALQFLVVDEADRV 162
>gi|194753610|ref|XP_001959103.1| GF12227 [Drosophila ananassae]
gi|190620401|gb|EDV35925.1| GF12227 [Drosophila ananassae]
Length = 522
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 116/157 (73%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L L PWL +Q +G+K T IQ+ IP +L+ DCIG AKTGSGKT AFALPI
Sbjct: 6 VNPFQSLGLRPWLAKQLTKLGLKGATPIQQNCIPAILSGRDCIGAAKTGSGKTFAFALPI 65
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L+K E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++
Sbjct: 66 LEKLSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMIESQKLMQR 125
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 126 PHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|384487839|gb|EIE80019.1| hypothetical protein RO3G_04724 [Rhizopus delemar RA 99-880]
Length = 425
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 119/155 (76%), Gaps = 1/155 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F D+ + W+ +++ +K PTEIQ+A I +++ +D IG AKTGSGKT AFA+PILQK
Sbjct: 32 FEDVGVEEWMCETLKSMAIKEPTEIQRACIQPIMDGKDVIGGAKTGSGKTAAFAIPILQK 91
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+DPYG+FALVLTPTRELAYQI +QF VLGK + ++ ++ GGMDM+ Q ELAK+PHI
Sbjct: 92 LSQDPYGVFALVLTPTRELAYQIAEQFRVLGKGIGVKECVVVGGMDMMTQALELAKRPHI 151
Query: 128 VIATPGRLADHLDTCN-TFSLNRIKFLVLDEADRL 161
+IATPGRL DH+ + + +L+R KFLV+DEADR+
Sbjct: 152 IIATPGRLRDHIQSSSGAVNLSRCKFLVMDEADRM 186
>gi|255721753|ref|XP_002545811.1| hypothetical protein CTRG_00592 [Candida tropicalis MYA-3404]
gi|240136300|gb|EER35853.1| hypothetical protein CTRG_00592 [Candida tropicalis MYA-3404]
Length = 440
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L + WL + + PT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFNELGVAKWLSEALDAMKIYKPTSIQSACIPQILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDPYG+F LVLTPTRELA QI +QF LG MN++VS+I GG D+V Q EL KKPH
Sbjct: 62 QWSEDPYGVFGLVLTPTRELALQIAEQFTALGSNMNIKVSVIVGGEDIVKQALELQKKPH 121
Query: 127 IVIATPGRLADHLDTC--NTFS-LNRIKFLVLDEADRL 161
VIATPGRLADH+ T S L R+K+LVLDEADRL
Sbjct: 122 FVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRL 159
>gi|195028030|ref|XP_001986885.1| GH21617 [Drosophila grimshawi]
gi|193902885|gb|EDW01752.1| GH21617 [Drosophila grimshawi]
Length = 524
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 117/155 (75%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L PWL +Q +G+K T IQ+ IP +L+ +DCIG AKTGSGKT AFALPIL+
Sbjct: 8 AFLQLGLRPWLAKQLTKLGLKGATPIQENCIPAILSGKDCIGAAKTGSGKTFAFALPILE 67
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PH
Sbjct: 68 RLSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMIESQKLMQRPH 127
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 128 IVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|195581763|ref|XP_002080703.1| GD10627 [Drosophila simulans]
gi|194192712|gb|EDX06288.1| GD10627 [Drosophila simulans]
Length = 527
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 116/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL++Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL++
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|195332686|ref|XP_002033028.1| GM21090 [Drosophila sechellia]
gi|194124998|gb|EDW47041.1| GM21090 [Drosophila sechellia]
Length = 522
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 116/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL++Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL++
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|146414784|ref|XP_001483362.1| hypothetical protein PGUG_04091 [Meyerozyma guilliermondii ATCC
6260]
Length = 433
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 112/159 (70%), Gaps = 7/159 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL ++ WL+ + ++ PT IQ IP +L DCIG AKTGSGKT+AFA P++ K
Sbjct: 3 FKDLGVSKWLLEALAAMKIRLPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMTK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP+GI+ LVLTPTRELA QI +QFL LG MN++V+++ GG DMV Q E+ K PH
Sbjct: 63 WSEDPFGIYGLVLTPTRELALQIAEQFLALGASMNIKVAVVVGGEDMVKQALEIQKSPHF 122
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
+IATPGRLADH+ DT L RIKFLVLDEADRL
Sbjct: 123 IIATPGRLADHILNSGDDTVG--GLKRIKFLVLDEADRL 159
>gi|194863293|ref|XP_001970368.1| GG23409 [Drosophila erecta]
gi|190662235|gb|EDV59427.1| GG23409 [Drosophila erecta]
Length = 526
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 116/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL++Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL++
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|17136814|ref|NP_476927.1| DEAD box protein 45A [Drosophila melanogaster]
gi|12643712|sp|Q07886.2|DDX49_DROME RecName: Full=Probable ATP-dependent RNA helicase Dbp45A;
Short=DEAD box protein 45A
gi|7303950|gb|AAF58994.1| DEAD box protein 45A [Drosophila melanogaster]
gi|16185764|gb|AAL13957.1| LD47509p [Drosophila melanogaster]
Length = 521
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 116/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL++Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL++
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|145232875|ref|XP_001399810.1| ATP-dependent RNA helicase dbp8 [Aspergillus niger CBS 513.88]
gi|152013493|sp|A5AA68.1|DBP8_ASPNC RecName: Full=ATP-dependent RNA helicase dbp8
gi|134056731|emb|CAK44220.1| unnamed protein product [Aspergillus niger]
gi|350634649|gb|EHA23011.1| hypothetical protein ASPNIDRAFT_37042 [Aspergillus niger ATCC 1015]
Length = 522
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 117/164 (71%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ D SF L + PWLI T+ V+ PT IQKA IP +LN DCIG ++TGSGKT+AF
Sbjct: 87 LNDAQNSFASLNVAPWLIGSLTTMAVRKPTAIQKACIPEILNGRDCIGGSRTGSGKTIAF 146
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP+GIF LVLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 147 SVPMLQKWAEDPFGIFGLVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRPQAVA 206
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA++PH+VIATPGRLADH++T + + L R++ +VLDEADRL
Sbjct: 207 LAQRPHVVIATPGRLADHINTSGSDTIRGLKRVRMVVLDEADRL 250
>gi|242784404|ref|XP_002480380.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720527|gb|EED19946.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
Length = 538
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 117/158 (74%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + PWL++ T+ ++ PT IQK+ IP +L +DCIG ++TGSGKT+AFA+PILQ
Sbjct: 109 TFANLNVAPWLVKSLSTMAIRRPTAIQKSCIPEILQGKDCIGGSRTGSGKTIAFAVPILQ 168
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA+VLTPTRELA QI +QF + +L+ +ITGG DM Q L+++PH
Sbjct: 169 KWAEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGTDMRPQAIALSQRPH 228
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
++IATPGRLADH+ T LNR++ +V+DEADRL
Sbjct: 229 VIIATPGRLADHIRTSGEDTIVGLNRVRMIVMDEADRL 266
>gi|195474915|ref|XP_002089735.1| GE19250 [Drosophila yakuba]
gi|194175836|gb|EDW89447.1| GE19250 [Drosophila yakuba]
Length = 527
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 116/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL++Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL++
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|150863861|ref|XP_001382482.2| Dead-Box Protein 8, ATP-dependent helicase involved in rRNA
processing [Scheffersomyces stipitis CBS 6054]
gi|158514820|sp|A3LP87.2|DBP8_PICST RecName: Full=ATP-dependent RNA helicase DBP8
gi|149385117|gb|ABN64453.2| Dead-Box Protein 8, ATP-dependent helicase involved in rRNA
processing [Scheffersomyces stipitis CBS 6054]
Length = 445
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ WL + + TPT IQ IP +L+ DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFEDLGVSRWLSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIF LVLTPTRELA QI +QF LG MN+++S++ GG D V Q EL KKPH
Sbjct: 62 QWSEDPFGIFGLVLTPTRELALQIAEQFAALGASMNIKISVVVGGEDFVKQTLELQKKPH 121
Query: 127 IVIATPGRLADHLDTC--NTFS-LNRIKFLVLDEADRL 161
VIATPGRLADH+ T S L RIK+LVLDEADRL
Sbjct: 122 FVIATPGRLADHILNSGEETISGLRRIKYLVLDEADRL 159
>gi|346975912|gb|EGY19364.1| ATP-dependent RNA helicase dbp8 [Verticillium dahliae VdLs.17]
Length = 551
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 91/162 (56%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL + + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 113 DPDTTFSSLNVRPWLTQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 172
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP I+ LVLTPTRELA QI +QF +G L+V++ITGG DM Q LA
Sbjct: 173 PILQKWAEDPSAIYGLVLTPTRELALQIFEQFKAIGSPQGLKVTLITGGNDMRPQAIALA 232
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+PH+VIATPGRLADH+ T + L RI+F+VLDEADRL
Sbjct: 233 SRPHVVIATPGRLADHIRTSGEDTICGLRRIRFVVLDEADRL 274
>gi|302417318|ref|XP_003006490.1| ATP-dependent RNA helicase dbp8 [Verticillium albo-atrum VaMs.102]
gi|261354092|gb|EEY16520.1| ATP-dependent RNA helicase dbp8 [Verticillium albo-atrum VaMs.102]
Length = 551
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/162 (56%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL + + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 113 DPDTTFSSLNVRPWLTQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 172
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP I+ LVLTPTRELA QI +QF +G L+V++ITGG DM Q LA
Sbjct: 173 PILQKWAEDPSAIYGLVLTPTRELALQIFEQFKAIGSPQGLKVTLITGGNDMRPQAIALA 232
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+PH+VIATPGRLADH+ T + L RI+F+VLDEADRL
Sbjct: 233 SRPHVVIATPGRLADHIRTSGEDTICGLRRIRFVVLDEADRL 274
>gi|358372222|dbj|GAA88826.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 522
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 116/158 (73%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF LK+ PWLI T+ V+ PT IQKA IP +L+ DCIG ++TGSGKT+AF++P+LQ
Sbjct: 93 SFASLKVAPWLIGSLTTMAVRKPTAIQKACIPEILSGRDCIGGSRTGSGKTIAFSVPMLQ 152
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIF LVLTPTRELA QI +Q + +++ +ITGG DM Q LA++PH
Sbjct: 153 KWAEDPFGIFGLVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRPQALALAQRPH 212
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLADH++T T + L R++ +VLDEADRL
Sbjct: 213 VVIATPGRLADHINTSGTDTIRGLKRVRMVVLDEADRL 250
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 113/159 (71%), Gaps = 2/159 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I +F L L WL+R C+ +G+K PT +Q+ +P +L +D G A+TGSGKT AFALPI
Sbjct: 43 ITTFEGLGLTDWLVRACKELGMKRPTLVQQGCVPQILAGKDVFGLAQTGSGKTAAFALPI 102
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK E+PYG+FALVLTPTRELA+QI DQF LG +NLR +++ GGMDM Q K L ++
Sbjct: 103 LQKLAENPYGVFALVLTPTRELAFQISDQFKALGSEVNLRSTVVVGGMDMTTQAKALMQR 162
Query: 125 PHIVIATPGRLADHL--DTCNTFSLNRIKFLVLDEADRL 161
PHIVIATPGRL DH D + K+LVLDEADRL
Sbjct: 163 PHIVIATPGRLRDHFMNDPGIPDVFAKAKYLVLDEADRL 201
>gi|46125837|ref|XP_387472.1| hypothetical protein FG07296.1 [Gibberella zeae PH-1]
gi|91206552|sp|Q4I662.1|DBP8_GIBZE RecName: Full=ATP-dependent RNA helicase DBP8
Length = 547
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/162 (53%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL++ + + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 113 DPNTTFSALDVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAV 172
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IFA+VLTPTRELA QI +QF + +L+ ++TGG DM Q E+
Sbjct: 173 PILQKWSEDPTAIFAVVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRTQAIEIG 232
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH++IATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 233 KRPHVIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 274
>gi|255942321|ref|XP_002561929.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586662|emb|CAP94307.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 520
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F +L + PWL+ T+ +K PT IQKA IP +L +DCIG ++TGSGKT+AFA+PI
Sbjct: 89 LSTFAELDVAPWLVSSLATMAIKRPTAIQKACIPEILKGKDCIGGSRTGSGKTMAFAVPI 148
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+Q+W +P+GI+ALVLTPTRELA QI +QF + N++ ++ GGMDM Q ELA +
Sbjct: 149 MQQWARNPFGIYALVLTPTRELALQIYEQFRAVSAPQNMKPILVVGGMDMRQQAIELASR 208
Query: 125 PHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADH+ T L R+K +VLDEADRL
Sbjct: 209 PHVVIATPGRLADHIKTSGEDTVAGLRRVKMVVLDEADRL 248
>gi|195379947|ref|XP_002048732.1| GJ21163 [Drosophila virilis]
gi|194143529|gb|EDW59925.1| GJ21163 [Drosophila virilis]
Length = 519
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 116/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL +Q +G+K T IQ+ IP +L+ +DCIG AKTGSGKT AFALPIL+K
Sbjct: 9 FQKLGLRPWLAKQLTKLGLKGVTPIQENCIPAILSGKDCIGAAKTGSGKTFAFALPILEK 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQMIESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|310791524|gb|EFQ27051.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 550
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 88/162 (54%), Positives = 115/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ + + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 117 DPNTTFSAINVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 176
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IFALVLTPTRELA QI +QF + +L+ ++TGG DM Q LA
Sbjct: 177 PILQKWAEDPTAIFALVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRPQAIALA 236
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PH+VIATPGRLADH+ T + L R+K++VLDEADRL
Sbjct: 237 QRPHVVIATPGRLADHIRTSGEDTICGLRRVKYVVLDEADRL 278
>gi|67537466|ref|XP_662507.1| hypothetical protein AN4903.2 [Aspergillus nidulans FGSC A4]
gi|74657196|sp|Q5B3H7.1|DBP8_EMENI RecName: Full=ATP-dependent RNA helicase dbp8
gi|40741791|gb|EAA60981.1| hypothetical protein AN4903.2 [Aspergillus nidulans FGSC A4]
gi|259482230|tpe|CBF76513.1| TPA: ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B3H7] [Aspergillus
nidulans FGSC A4]
Length = 525
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + PWL+ T+ V+ PT IQ+A IP +L DCIG ++TGSGKT+AF++PILQ
Sbjct: 96 SFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQ 155
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA++LTPTRELA QI +Q + +++ +ITGG DM Q ELA +PH
Sbjct: 156 KWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQAIELAGRPH 215
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+V+ATPGRLADH++T T L R++ +VLDEADRL
Sbjct: 216 VVVATPGRLADHINTSGTDTVAGLKRVRMVVLDEADRL 253
>gi|198458635|ref|XP_001361114.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
gi|198136412|gb|EAL25690.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
Length = 527
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 117/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PW+++Q +G+K T IQ+ IP +L+ +DCIG A+TGSGKT AFALPIL++
Sbjct: 9 FQSLGLRPWMVKQLTKLGLKGATPIQQNCIPAILSGKDCIGAAQTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQMIESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|408399615|gb|EKJ78713.1| hypothetical protein FPSE_01081 [Fusarium pseudograminearum CS3096]
Length = 544
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL++ + + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 110 DPNTTFSALNVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAV 169
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IFA+VLTPTRELA QI +QF + +L+ ++TGG DM Q E+
Sbjct: 170 PILQKWSEDPTAIFAVVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRTQAIEIG 229
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH++IATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 230 KRPHVIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 271
>gi|195154715|ref|XP_002018267.1| GL17616 [Drosophila persimilis]
gi|194114063|gb|EDW36106.1| GL17616 [Drosophila persimilis]
Length = 527
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 117/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PW+++Q +G+K T IQ+ IP +L+ +DCIG A+TGSGKT AFALPIL++
Sbjct: 9 FQSLGLRPWMVKQLTKLGLKGATPIQQNCIPAILSGKDCIGAAQTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQMIESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>gi|378725819|gb|EHY52278.1| hypothetical protein HMPREF1120_00492 [Exophiala dermatitidis
NIH/UT8656]
Length = 550
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 89/160 (55%), Positives = 116/160 (72%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + PWL+ + ++ PTEIQ+A IP +L DCIG ++TG+GKT+AFA+PILQ
Sbjct: 101 TFQALNVAPWLVHSLAAMAIQHPTEIQRACIPEILKGRDCIGGSRTGTGKTVAFAVPILQ 160
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GI+A+VLTPTRELA QI +QF LG NL+ +ITGG DM Q L+++PH
Sbjct: 161 KWAEDPFGIYAVVLTPTRELALQIFEQFQALGTPQNLKTVLITGGTDMRPQAIALSRRPH 220
Query: 127 IVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRLADH+ DT L+R+K +VLDEADRL
Sbjct: 221 IVVATPGRLADHILNSGQDTVG--GLSRVKVVVLDEADRL 258
>gi|312067818|ref|XP_003136922.1| Ddx49-A-prov protein [Loa loa]
Length = 478
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 117/158 (74%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F++L L+ WL Q + + + TPT +Q IPH+L D +GCAKTG+GKTLAF LPIL
Sbjct: 44 TFSELGLSKWLCNQVRHLAMNTPTPVQVNCIPHILAGSDVLGCAKTGTGKTLAFGLPILH 103
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DPYGI ALVLTPTRELA QIGDQF LG + L++ I+ GG D V QG +LA++PH
Sbjct: 104 ELAIDPYGICALVLTPTRELAIQIGDQFAALGTPIGLKIGIVVGGKDRVAQGNDLARRPH 163
Query: 127 IVIATPGRLADHL--DTCNTFSL-NRIKFLVLDEADRL 161
IV+ATPGRLADHL D+ NT L +++FLVLDEADRL
Sbjct: 164 IVVATPGRLADHLESDSENTGKLFKKLRFLVLDEADRL 201
>gi|393910350|gb|EFO27145.2| Ddx49-A-prov protein [Loa loa]
Length = 509
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 117/158 (74%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F++L L+ WL Q + + + TPT +Q IPH+L D +GCAKTG+GKTLAF LPIL
Sbjct: 44 TFSELGLSKWLCNQVRHLAMNTPTPVQVNCIPHILAGSDVLGCAKTGTGKTLAFGLPILH 103
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DPYGI ALVLTPTRELA QIGDQF LG + L++ I+ GG D V QG +LA++PH
Sbjct: 104 ELAIDPYGICALVLTPTRELAIQIGDQFAALGTPIGLKIGIVVGGKDRVAQGNDLARRPH 163
Query: 127 IVIATPGRLADHL--DTCNTFSL-NRIKFLVLDEADRL 161
IV+ATPGRLADHL D+ NT L +++FLVLDEADRL
Sbjct: 164 IVVATPGRLADHLESDSENTGKLFKKLRFLVLDEADRL 201
>gi|154298930|ref|XP_001549886.1| hypothetical protein BC1G_11712 [Botryotinia fuckeliana B05.10]
gi|160380630|sp|A6SFV4.1|DBP8_BOTFB RecName: Full=ATP-dependent RNA helicase dbp8
gi|347836724|emb|CCD51296.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL+ ++ +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 113 DAQTTFAALNVKPWLVGSLGSMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 172
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP+GIFALVLTPTRELA QI +QF + +L+ +ITGG DM Q LA
Sbjct: 173 PILQKWAEDPFGIFALVLTPTRELALQIYEQFKAISSPQSLKAVLITGGSDMRPQATALA 232
Query: 123 KKPHIVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ T +L R++ +VLDEADRL
Sbjct: 233 QRPHIVIATPGRLADHIRTSGEDTIGALRRVRMVVLDEADRL 274
>gi|212527694|ref|XP_002144004.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
gi|210073402|gb|EEA27489.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
Length = 538
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 116/158 (73%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + PWL++ T+ ++ PT IQK+ IP +L +DCIG ++TGSGKT+AFA+PILQ
Sbjct: 109 TFATLNVAPWLVKSLSTMAIRRPTAIQKSCIPEILKGKDCIGGSRTGSGKTIAFAVPILQ 168
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+G+FA+VLTPTRELA QI +QF + +L+ +ITGG DM Q L+++PH
Sbjct: 169 KWAEDPFGVFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGTDMRPQAIALSQRPH 228
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
++IATPGRLADH+ T LNR++ +V+DEADRL
Sbjct: 229 VIIATPGRLADHIRTSGEDTIVGLNRVRMVVMDEADRL 266
>gi|195120383|ref|XP_002004708.1| GI20069 [Drosophila mojavensis]
gi|193909776|gb|EDW08643.1| GI20069 [Drosophila mojavensis]
Length = 521
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 115/154 (74%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL +Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL+K
Sbjct: 9 FLKLGLRPWLAKQLTKLGLKGVTPIQENCIPPILAGKDCIGAAKTGSGKTFAFALPILEK 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQPMGVRVCVVSGGTDQMIESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +KFLV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKFLVVDEADRM 162
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL +N L C ++G KTPT IQ+ IP L+ D IG A+TGSGKT AFALPIL
Sbjct: 58 KSFADLGVNESLCDACTSLGFKTPTAIQREAIPLALSGRDIIGLAETGSGKTAAFALPIL 117
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q DP F LVL PTRELAYQI QF LG ++ +R ++I GGMDMV Q LAKKP
Sbjct: 118 QALLHDPQPFFGLVLAPTRELAYQISQQFEALGSLIRVRCAVIVGGMDMVPQAIALAKKP 177
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 178 HIVVATPGRLLDHLENTKGFSLRSLKYLIMDEADRL 213
>gi|346327204|gb|EGX96800.1| ATP dependent RNA helicase (Dbp8) [Cordyceps militaris CM01]
Length = 575
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 87/162 (53%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +FT L++ PWL++ + ++ PT IQKA IP +L DCIG ++TGSGKT+AFA+
Sbjct: 140 DPNTTFTALRVRPWLVQSLANMAIRRPTGIQKACIPEILQGRDCIGGSRTGSGKTVAFAV 199
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQ+W EDP IF LVLTPTRELA QI +QF + +L+V +ITGG DM Q L
Sbjct: 200 PMLQRWAEDPTAIFGLVLTPTRELALQIYEQFRAIAAPQSLKVLLITGGADMRPQAIALR 259
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PH+VIATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 260 QRPHVVIATPGRLADHVRTSGEDTVGGLRRVRYVVLDEADRL 301
>gi|358398664|gb|EHK48015.1| hypothetical protein TRIATDRAFT_46772 [Trichoderma atroviride IMI
206040]
Length = 543
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 117/162 (72%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL++ + + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 110 DPNTTFSALTVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 169
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQKW EDP IFA+VLTPTRELA QI +QF + +L++ +ITGG DM Q LA
Sbjct: 170 PVLQKWAEDPSAIFAVVLTPTRELALQIYEQFKAISSPQSLKMILITGGADMRAQAIALA 229
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PHI+IATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 230 QRPHIIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 271
>gi|213403328|ref|XP_002172436.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus
yFS275]
gi|212000483|gb|EEB06143.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus
yFS275]
Length = 456
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F L ++PWL+ Q + ++ PT IQK +I VL DCIG AKTGSGKT+AFALPIL
Sbjct: 7 ETFGSLGISPWLVETLQAVAIQEPTPIQKGVIKKVLEGADCIGGAKTGSGKTIAFALPIL 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+KW DP+G FA++LTPTRELA QI +QF LG MNL+ ++ GGMDMV Q L+K+P
Sbjct: 67 EKWARDPFGTFAVILTPTRELAIQIDEQFAALGAPMNLKHILVVGGMDMVAQAIALSKRP 126
Query: 126 HIVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
HIV+ATPGRLAD + + SL+R +F+V DEADRL
Sbjct: 127 HIVVATPGRLADLIRSNGEETYASLHRTQFVVFDEADRL 165
>gi|302916935|ref|XP_003052278.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733217|gb|EEU46565.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 545
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 115/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 111 DPNTTFSALNVRPWLVQSLGNMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 170
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW +DP IFA+VLTPTRELA QI +QF + +L+ +ITGG DM Q EL
Sbjct: 171 PILQKWADDPTAIFAVVLTPTRELALQIYEQFKAISSPQSLKAILITGGSDMRAQAIELG 230
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH+VIATPGRLADH+ T + L R+K++VLDEADRL
Sbjct: 231 KRPHVVIATPGRLADHVRTSGEDTICGLRRVKYVVLDEADRL 272
>gi|254568340|ref|XP_002491280.1| Putative ATP-dependent RNA helicase of the DEAD-box family
[Komagataella pastoris GS115]
gi|238031077|emb|CAY69000.1| Putative ATP-dependent RNA helicase of the DEAD-box family
[Komagataella pastoris GS115]
gi|328352202|emb|CCA38601.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 434
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L ++ WL + + TP++IQ+A IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 4 FEELGVSKWLCESLDAMKIYTPSKIQEATIPKILAGYDCIGGAKTGSGKTIAFAAPMLTK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDPYG+F L+LTPTRELA QI +Q+ LG MN++VS+I GG D+V Q EL ++PH
Sbjct: 64 WSEDPYGVFGLILTPTRELALQIAEQYAALGASMNIKVSVILGGGDIVQQALELQRRPHF 123
Query: 128 VIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
V+ATPGRLADH+ + + L +IKFLVLDEADRL
Sbjct: 124 VVATPGRLADHILSSGEETIGGLRKIKFLVLDEADRL 160
>gi|449549923|gb|EMD40888.1| hypothetical protein CERSUDRAFT_103268 [Ceriporiopsis subvermispora
B]
Length = 435
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ ++ PTEIQ A IP +L DCIG AKTGSGKT+AFALPILQK DPYGI+ALVLTPT
Sbjct: 1 MSIRAPTEIQAACIPPLLAGRDCIGNAKTGSGKTIAFALPILQKLAVDPYGIYALVLTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTC- 142
RELA+QI +QF VLG +NLR +++ GGMDM+ Q EL +PH+V+ATPGR+ DHL +
Sbjct: 61 RELAFQISEQFAVLGASLNLRTAVVVGGMDMMAQALELGNRPHVVVATPGRIVDHLKSSG 120
Query: 143 NTFSLNRIKFLVLDEADRLSLMTSLKFFFFFF 174
+ L+R+KFLVLDEADRL T + F
Sbjct: 121 GEWDLSRVKFLVLDEADRLLTPTFAPELSYLF 152
>gi|342885803|gb|EGU85755.1| hypothetical protein FOXB_03603 [Fusarium oxysporum Fo5176]
Length = 539
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 115/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 105 DPNTTFSSLNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 164
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IFA+VLTPTRELA QI +QF + +L+ ++TGG DM Q E+
Sbjct: 165 PILQKWSEDPTAIFAIVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRTQAIEIG 224
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH++IATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 225 KRPHVIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 266
>gi|326426583|gb|EGD72153.1| hypothetical protein PTSG_00174 [Salpingoeca sp. ATCC 50818]
Length = 321
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 112/159 (70%)
Query: 10 DLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWC 69
DL + L +QC+ + +Q A IPH+L ED AKTGSGKT AFALPIL +
Sbjct: 43 DLPIKKSLRKQCKRMKYTAARAVQAACIPHILRGEDVYAAAKTGSGKTAAFALPILDRLM 102
Query: 70 EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVI 129
EDPYGIFA+VLTPTRELAYQI DQF GKV NLR IITGG+DMV++ L++ PH+V+
Sbjct: 103 EDPYGIFAVVLTPTRELAYQIADQFYTFGKVANLRHCIITGGVDMVEEQNALSRLPHVVV 162
Query: 130 ATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLK 168
ATPGRLA H+ + L+R++FLVLDEADRL S++
Sbjct: 163 ATPGRLAAHITSGAEVDLSRVQFLVLDEADRLMTNASMQ 201
>gi|322707196|gb|EFY98775.1| ATP-dependent RNA helicase DBP8 [Metarhizium anisopliae ARSEF 23]
Length = 549
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 86/162 (53%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP SF+ L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 115 DPNTSFSSLNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 174
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IF +VLTPTRELA QI +QF + +L+ ++TGG DM Q +A
Sbjct: 175 PILQKWAEDPSAIFGVVLTPTRELALQIYEQFKAISSPQSLKAILVTGGSDMRAQAIAMA 234
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PH++IATPGRLADH+ T + L R++F+VLDEADRL
Sbjct: 235 QRPHVIIATPGRLADHIRTSGEDTICGLRRVRFVVLDEADRL 276
>gi|322698392|gb|EFY90162.1| ATP-dependent RNA helicase DBP8 [Metarhizium acridum CQMa 102]
Length = 548
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 86/162 (53%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP SF+ L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 114 DPNTSFSSLNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 173
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IF +VLTPTRELA QI +QF + +L+ ++TGG DM Q +A
Sbjct: 174 PILQKWAEDPSAIFGVVLTPTRELALQIYEQFKAISSPQSLKAILVTGGSDMRAQAIAMA 233
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PH++IATPGRLADH+ T + L R++F+VLDEADRL
Sbjct: 234 QRPHVIIATPGRLADHIRTSGEDTICGLRRVRFVVLDEADRL 275
>gi|321262460|ref|XP_003195949.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317462423|gb|ADV24162.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 484
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 111/156 (71%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL ++P L R C ++G K P++IQ IPH L +D IG A+TGSGKT AF+LPIL
Sbjct: 38 KSFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E+P FALVL PTRELAYQI Q LG + +R +++ GGMDM+ Q L+K+P
Sbjct: 98 QTLWENPQPFFALVLAPTRELAYQISQQITSLGSGIGVRTAVLVGGMDMMSQSIALSKRP 157
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 158 HVIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRL 193
>gi|304671|gb|AAA16339.1| DEAD-box protein [Drosophila melanogaster]
gi|313850|emb|CAA80804.1| DEAD-box protein [Drosophila melanogaster]
Length = 527
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 114/152 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL++Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL++
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEAD 159
V+A PGRLADHL C+TFS + +K+LV+DEAD
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEAD 160
>gi|294660132|ref|XP_462573.2| DEHA2G23782p [Debaryomyces hansenii CBS767]
gi|218512022|sp|Q6BGU8.2|DBP8_DEBHA RecName: Full=ATP-dependent RNA helicase DBP8
gi|199434486|emb|CAG91086.2| DEHA2G23782p [Debaryomyces hansenii CBS767]
Length = 441
Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L ++ WL ++ + TPT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP GI+ LVLTPTRELA QI +QF LG MN++VS+I GG D+V Q EL ++PH
Sbjct: 62 QWSEDPSGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALELQRRPH 121
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
V+ATPGRLADH+ + L R+K+L+LDEADRL
Sbjct: 122 FVVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRL 159
>gi|388582220|gb|EIM22525.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 509
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 121/166 (72%), Gaps = 5/166 (3%)
Query: 1 MEDPIKS----FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGK 56
+++P KS F D ++P L +++ + TPTEIQK+ + ++N DCI AKTGSGK
Sbjct: 27 IKEPTKSSASTFADYGVHPSLCNALKSLNITTPTEIQKSCMAEIMNGRDCIASAKTGSGK 86
Query: 57 TLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVD 116
T+AF LPILQ +DPYGI A++LTPTRELA+QI DQF LG +NLR ++ GGMDM++
Sbjct: 87 TIAFGLPILQHLTKDPYGICAIILTPTRELAFQIADQFHALGGHLNLRAPVVVGGMDMME 146
Query: 117 QGKELAKKPHIVIATPGRLADHLDT-CNTFSLNRIKFLVLDEADRL 161
Q EL ++PH+VIATPGR AD L + ++LN++K+LVLDEADRL
Sbjct: 147 QAIELQRRPHVVIATPGRFADLLKSKGEEWNLNKVKYLVLDEADRL 192
>gi|156064101|ref|XP_001597972.1| hypothetical protein SS1G_00058 [Sclerotinia sclerotiorum 1980]
gi|160380631|sp|A7E436.1|DBP8_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp8
gi|154690920|gb|EDN90658.1| hypothetical protein SS1G_00058 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 540
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 113/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL+ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 108 DAQTTFAALDVKPWLVASLGAMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 167
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP+GIFALVLTPTRELA QI +QF + +L+ +ITGG DM Q LA
Sbjct: 168 PILQKWAEDPFGIFALVLTPTRELALQIYEQFKAISSPQSLKAVLITGGSDMRPQATALA 227
Query: 123 KKPHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRL 161
++PH+VIATPGRLADH+ T +L R++ +VLDEADRL
Sbjct: 228 QRPHVVIATPGRLADHIRTSGEDTVCALRRVRMVVLDEADRL 269
>gi|238486904|ref|XP_002374690.1| ATP dependent RNA helicase (Dbp8), putative [Aspergillus flavus
NRRL3357]
gi|220699569|gb|EED55908.1| ATP dependent RNA helicase (Dbp8), putative [Aspergillus flavus
NRRL3357]
Length = 417
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 118/164 (71%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
++D SF L ++PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AF
Sbjct: 88 LQDEESSFKALNVSPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAF 147
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
A+PILQKW +DP+GIFA+VLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 148 AVPILQKWAQDPFGIFAVVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRSQALA 207
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
L+++PH+VIATPGRLADH++T + L R++ +VLDEADRL
Sbjct: 208 LSQRPHVVIATPGRLADHINTSGEDTVCGLKRVRMVVLDEADRL 251
>gi|317143933|ref|XP_001819794.2| ATP-dependent RNA helicase dbp8 [Aspergillus oryzae RIB40]
Length = 523
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 118/164 (71%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
++D SF L ++PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AF
Sbjct: 88 LQDEESSFKALNVSPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAF 147
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
A+PILQKW +DP+GIFA+VLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 148 AVPILQKWAQDPFGIFAVVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRSQALA 207
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
L+++PH+VIATPGRLADH++T + L R++ +VLDEADRL
Sbjct: 208 LSQRPHVVIATPGRLADHINTSGEDTVCGLKRVRMVVLDEADRL 251
>gi|328874156|gb|EGG22522.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 576
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DLKL PWL+ C+ +G K P+ IQ IP VL D + AKTGSGKT AFA+PIL
Sbjct: 93 KSFGDLKLQPWLVNSCKILGFKQPSNIQYNTIPKVLEGRDILASAKTGSGKTAAFAIPIL 152
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
EDPYG+FA+VLTPTRELA QIG+QF +G MN+ +++ GG+D V Q L K+P
Sbjct: 153 SLLSEDPYGVFAVVLTPTRELAVQIGEQFKAIGSAMNVNCAVVIGGIDSVAQSLVLDKRP 212
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRLA HL +L KFLVLDEADR+
Sbjct: 213 HIIVATPGRLASHLSNGLKIALKFCKFLVLDEADRI 248
>gi|426198263|gb|EKV48189.1| hypothetical protein AGABI2DRAFT_67452 [Agaricus bisporus var.
bisporus H97]
Length = 447
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ ++ PTE+Q A IP +L+ DCIG AKTGSGKT+AFALPILQK DPYGI+ALVLTPT
Sbjct: 1 MSIRIPTEVQTACIPPLLSGADCIGNAKTGSGKTIAFALPILQKLSADPYGIYALVLTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHL-DTC 142
RELA+QI +QF VLG +N++ +++ GGMDM+ Q EL +PH+VIATPGR+ DHL +
Sbjct: 61 RELAFQIAEQFAVLGAALNVQTAVVVGGMDMMAQALELENRPHVVIATPGRIVDHLRSSS 120
Query: 143 NTFSLNRIKFLVLDEADRL 161
++L+R+KFLVLDEADRL
Sbjct: 121 GQWNLSRVKFLVLDEADRL 139
>gi|448527184|ref|XP_003869451.1| Dbp8 protein [Candida orthopsilosis Co 90-125]
gi|380353804|emb|CCG23316.1| Dbp8 protein [Candida orthopsilosis]
Length = 443
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 3/157 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL + WL + + + PT IQ A IP +L +DCIG AKTGSGKT+AFA P+L +
Sbjct: 6 FQDLGVARWLSESLEAMKINKPTSIQAACIPAILKGQDCIGGAKTGSGKTIAFAAPMLTQ 65
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDPYGIF LVLTPTRELA QI +Q+ LG MN++V ++ GG D V Q EL KKPH
Sbjct: 66 WSEDPYGIFGLVLTPTRELALQIAEQYTALGAQMNIKVCVVVGGEDFVKQALELQKKPHF 125
Query: 128 VIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
VIATPGRLADH+ + L R+++LVLDEADRL
Sbjct: 126 VIATPGRLADHVLNSGEETVSGLRRVRYLVLDEADRL 162
>gi|167533121|ref|XP_001748241.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773361|gb|EDQ87002.1| predicted protein [Monosiga brevicollis MX1]
Length = 473
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 114/162 (70%), Gaps = 13/162 (8%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DLKL+ WLIRQC+ + PT +Q+A +P +LNDED AKTGSGKT AFALPIL+
Sbjct: 2 SFEDLKLSSWLIRQCRNLNFTRPTAVQQACVPAILNDEDVYAAAKTGSGKTAAFALPILE 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DPYG++A+VLTPTRELA+QI DQF LGK + +RV+ I GG+D + Q EL+++PH
Sbjct: 62 QLSHDPYGVYAVVLTPTRELAFQISDQFQSLGKPIGVRVATIVGGIDSIKQAVELSRRPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLK 168
I++ATPGRLA H LVLDEADRL +L+
Sbjct: 122 IIVATPGRLAVHT-------------LVLDEADRLMTNETLQ 150
>gi|320585934|gb|EFW98613.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 572
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 87/162 (53%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F L + PWL++ + + PT IQK IP +L+ +DCIG ++TGSGKT+AFA+
Sbjct: 135 DPNTTFGSLGVRPWLVQSLANMAIHRPTSIQKGCIPAILSGDDCIGGSRTGSGKTVAFAV 194
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQ W DP IFALVLTPTRELA QI +QFL + L+ ++TGG DM Q LA
Sbjct: 195 PVLQAWATDPSAIFALVLTPTRELALQIYEQFLAISAPQPLKAVLVTGGADMRAQATALA 254
Query: 123 KKPHIVIATPGRLADHLDTC---NTFSLNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ T L R++F+VLDEADRL
Sbjct: 255 RRPHIVIATPGRLADHIRTSGEDTVCGLRRVRFVVLDEADRL 296
>gi|115396304|ref|XP_001213791.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|121738779|sp|Q0CNX1.1|DBP8_ASPTN RecName: Full=ATP-dependent RNA helicase dbp8
gi|114193360|gb|EAU35060.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 527
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + PWLI T+ V+ PT IQ+A IP +L DCIG ++TGSGKT+AFA+PILQ
Sbjct: 87 SFKALNVAPWLIGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFAVPILQ 146
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA+VLTPTRELA QI +QF + +++ +ITGG DM Q L+++PH
Sbjct: 147 KWAEDPFGIFAVVLTPTRELALQIYEQFKAISAPQSMKPVLITGGTDMRPQALALSQRPH 206
Query: 127 IVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRL 161
+VIATPGRLADH+ T L R++ +VLDEADRL
Sbjct: 207 VVIATPGRLADHIQTSGEDTVRGLKRVRMVVLDEADRL 244
>gi|405122110|gb|AFR96877.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus neoformans var.
grubii H99]
Length = 484
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 111/156 (71%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL ++P L R C ++G K P++IQ IPH L +D IG A+TGSGKT AF+LPIL
Sbjct: 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E+P FALVL PTRELAYQI Q LG + +R +++ GGMDM+ Q L+K+P
Sbjct: 98 QTLWENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRP 157
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 158 HVIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRL 193
>gi|225681783|gb|EEH20067.1| ATP-dependent RNA helicase dbp8 [Paracoccidioides brasiliensis
Pb03]
Length = 546
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L PWL+ T+ +K PT IQKA IP +L DCIG ++TGSGKT+AFA PILQ
Sbjct: 117 SFATLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPILQ 176
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA+VLTPTRELA QI +Q + +L+ +ITGG +M Q L+++PH
Sbjct: 177 KWSEDPFGIFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALSQRPH 236
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLADH+++ + LNR +F+VLDEADRL
Sbjct: 237 VVIATPGRLADHINSSGRDTICGLNRARFVVLDEADRL 274
>gi|58271466|ref|XP_572889.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115044|ref|XP_773820.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819312|sp|P0CR01.1|RRP3_CRYNB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|338819313|sp|P0CR00.1|RRP3_CRYNJ RecName: Full=ATP-dependent rRNA helicase RRP3
gi|50256448|gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229148|gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 484
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 111/156 (71%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL ++P L R C ++G K P++IQ IPH L +D IG A+TGSGKT AF+LPIL
Sbjct: 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E+P FALVL PTRELAYQI Q LG + +R +++ GGMDM+ Q L+K+P
Sbjct: 98 QTLWENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRP 157
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 158 HIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRL 193
>gi|226289015|gb|EEH44527.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides brasiliensis
Pb18]
Length = 546
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L PWL+ T+ +K PT IQKA IP +L DCIG ++TGSGKT+AFA PILQ
Sbjct: 117 SFATLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPILQ 176
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA+VLTPTRELA QI +Q + +L+ +ITGG +M Q L+++PH
Sbjct: 177 KWSEDPFGIFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALSQRPH 236
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLADH+++ + LNR +F+VLDEADRL
Sbjct: 237 VVIATPGRLADHINSSGRDTICGLNRARFVVLDEADRL 274
>gi|340522490|gb|EGR52723.1| predicted protein [Trichoderma reesei QM6a]
Length = 560
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/162 (51%), Positives = 115/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F L + PWL++ + ++ PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 127 DPNTTFAALNVRPWLVQSLGNMAIRRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 186
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQKW EDP IFA+VLTPTRELA QI +QF + +L++ ++TGG DM Q LA
Sbjct: 187 PVLQKWAEDPTAIFAVVLTPTRELALQIYEQFKAISSPQSLKIILVTGGADMRSQAIALA 246
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PH++IATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 247 QRPHVIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 288
>gi|50551977|ref|XP_503463.1| YALI0E02552p [Yarrowia lipolytica]
gi|74659870|sp|Q6C799.1|DBP8_YARLI RecName: Full=ATP-dependent RNA helicase DBP8
gi|49649332|emb|CAG79042.1| YALI0E02552p [Yarrowia lipolytica CLIB122]
Length = 442
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 113/160 (70%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SFTDL L WL + + P+ IQKA IP ++ +DCIG A+TGSGKT+AFA P+L
Sbjct: 2 SFTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLA 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W +DP GIF LVLTPTRELA QI +QF LG MN+RV++I GG+DMV Q EL K PH
Sbjct: 62 EWSKDPCGIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDMVKQSLELQKMPH 121
Query: 127 IVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADH+ DT F R++++V+DEADRL
Sbjct: 122 FVIATPGRLADHIRSSGEDTIRGF--RRVRYVVMDEADRL 159
>gi|254580331|ref|XP_002496151.1| ZYRO0C11660p [Zygosaccharomyces rouxii]
gi|238939042|emb|CAR27218.1| ZYRO0C11660p [Zygosaccharomyces rouxii]
Length = 435
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 111/165 (67%), Gaps = 7/165 (4%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E +KSF L ++ WL+ + + PT IQ A IP +L DCIG AKTGSGKT+AF
Sbjct: 3 EGSVKSFKILGVSKWLVETLNAMKISQPTTIQSACIPEILKGRDCIGGAKTGSGKTIAFG 62
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
P+L KW EDP G+F +VLTPTRELA QI +QF LG MN+RVSII GG D+V QG EL
Sbjct: 63 APMLTKWSEDPCGMFGVVLTPTRELAMQIAEQFTALGSNMNIRVSIIVGGEDIVKQGLEL 122
Query: 122 AKKPHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
+KPH +IATPGRLA H+ DT L R KFLVLDEAD L
Sbjct: 123 QRKPHFIIATPGRLAHHILNSGDDTVG--GLIRTKFLVLDEADSL 165
>gi|299747561|ref|XP_001837121.2| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|298407575|gb|EAU84738.2| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 599
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 96/171 (56%), Positives = 120/171 (70%), Gaps = 9/171 (5%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ SF+ L ++ L ++ + +PTE+Q A IP +L G AKTGSGKT+AFALPI
Sbjct: 125 VTSFSSLGVSNVLQTALSSMSITSPTEVQAACIPPIL-----AGNAKTGSGKTIAFALPI 179
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK DPYGIFALVLTPTRELA+QI +QF VLG +N+R S+I GGMDMV Q EL ++
Sbjct: 180 LQKLLVDPYGIFALVLTPTRELAFQIAEQFAVLGGSVNVRTSVIVGGMDMVSQALELDQR 239
Query: 125 PHIVIATPGRLADHL-DTCNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
PHI+IATPGR+ DHL T + L+RIKFLVLDEADRL + L + F
Sbjct: 240 PHIIIATPGRIVDHLKSTKGNWDLSRIKFLVLDEADRLLTETFTPELSYLF 290
>gi|358386955|gb|EHK24550.1| hypothetical protein TRIVIDRAFT_30234 [Trichoderma virens Gv29-8]
Length = 544
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL++ + ++ PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 111 DPNTTFSALNVRPWLVQSLGNMAIRRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 170
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQKW EDP IFA+VLTPTRELA QI +QF + +L++ ++TGG DM Q LA
Sbjct: 171 PVLQKWAEDPTAIFAVVLTPTRELALQIYEQFKAISSPQSLKMILVTGGADMRSQAIALA 230
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PH++IATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 231 QRPHVIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 272
>gi|390601527|gb|EIN10921.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 441
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ ++ PTEIQ A IP +L EDCIG AKTGSGKT+AFALPIL + DPYGIFALVLTPT
Sbjct: 1 MSIRHPTEIQAACIPPLLQGEDCIGNAKTGSGKTIAFALPILHRLSMDPYGIFALVLTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDT-C 142
RELA+QI +QF VLG +N+R +++ GGMDM+ Q EL +PH+V+ATPGR+ DHL +
Sbjct: 61 RELAFQIAEQFAVLGGAINVRTAVVVGGMDMMAQAIELRNRPHVVVATPGRMVDHLRSGS 120
Query: 143 NTFSLNRIKFLVLDEADRL 161
+ L+R+KFL+LDEADRL
Sbjct: 121 GEWDLSRVKFLILDEADRL 139
>gi|425768778|gb|EKV07293.1| ATP dependent RNA helicase (Dbp8), putative [Penicillium digitatum
Pd1]
gi|425770200|gb|EKV08673.1| ATP dependent RNA helicase (Dbp8), putative [Penicillium digitatum
PHI26]
Length = 520
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 114/160 (71%), Gaps = 3/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F +L + PWL+ + +K PT IQKA IP +L +DCIG ++TGSGKT+AFA+PI
Sbjct: 89 LSTFAELDVAPWLVSSLTAMAIKRPTAIQKACIPEILKGKDCIGGSRTGSGKTMAFAVPI 148
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+Q+W +P+GI+ALVLTPTRELA QI +QF + N++ ++ GG+DM Q ELA +
Sbjct: 149 MQQWARNPFGIYALVLTPTRELALQIYEQFRAVSAPQNMKPILVVGGVDMRQQAIELANR 208
Query: 125 PHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADH+ T L R+K +VLDEADRL
Sbjct: 209 PHVVIATPGRLADHIKTSGVDTVAGLRRVKMVVLDEADRL 248
>gi|402591826|gb|EJW85755.1| Ddx49 protein [Wuchereria bancrofti]
Length = 461
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 115/158 (72%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ WL Q + + + TPT +Q IPH+L D +GCAKTG+GKTLAF LPIL
Sbjct: 45 TFAELGLSKWLCDQLRHLAINTPTPVQVNCIPHILAGSDVLGCAKTGTGKTLAFGLPILH 104
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DPYGI AL+LTPTRELA QIGDQF LG + L++ II GG D V Q +LA++PH
Sbjct: 105 ELALDPYGICALILTPTRELAMQIGDQFAALGTSIGLKIGIIVGGKDRVAQSSDLARRPH 164
Query: 127 IVIATPGRLADHL--DTCNTFSL-NRIKFLVLDEADRL 161
I++ATPGRLADHL D+ NT L +++FLVLDEADRL
Sbjct: 165 IIVATPGRLADHLESDSENTGKLFEKLRFLVLDEADRL 202
>gi|395330400|gb|EJF62783.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 472
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 112/150 (74%), Gaps = 4/150 (2%)
Query: 26 VKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRE 85
+K+PTEIQ A IP +L DCIG AKTGSGKT+AFALPILQK DPYGIFAL+LTPTRE
Sbjct: 16 IKSPTEIQAACIPPLLAGRDCIGNAKTGSGKTIAFALPILQKLSLDPYGIFALILTPTRE 75
Query: 86 LAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHL-DTCNT 144
LA+QI +QF VLG +NLR +++ GG+DM+ Q EL +PH+V+ATPGR+ D L T
Sbjct: 76 LAFQISEQFAVLGAPLNLRTAVVVGGIDMMAQALELGNRPHVVVATPGRIVDLLKSTSGE 135
Query: 145 FSLNRIKFLVLDEADRL---SLMTSLKFFF 171
+ L+RIKFLVLDEADRL S L + F
Sbjct: 136 WDLSRIKFLVLDEADRLLTPSFAPELSYLF 165
>gi|409079975|gb|EKM80336.1| hypothetical protein AGABI1DRAFT_99944 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 446
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ ++ PTE+Q A IP +L+ DCIG AKTGSGKT+AFALPILQK DPYGI+ALVLTPT
Sbjct: 1 MSIRIPTEVQTACIPPLLSGRDCIGNAKTGSGKTIAFALPILQKLSADPYGIYALVLTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHL-DTC 142
RELA+QI +QF VLG +N++ +++ GGMDM+ Q EL +PH+VIATPGR+ DHL +
Sbjct: 61 RELAFQIAEQFAVLGAALNVQTAVVVGGMDMMAQALELENRPHVVIATPGRIVDHLRSSS 120
Query: 143 NTFSLNRIKFLVLDEADRL 161
++L+R+ FLVLDEADRL
Sbjct: 121 GQWNLSRVTFLVLDEADRL 139
>gi|398398659|ref|XP_003852787.1| ATP-dependent RNA helicase dbp8 [Zymoseptoria tritici IPO323]
gi|339472668|gb|EGP87763.1| hypothetical protein MYCGRDRAFT_92934 [Zymoseptoria tritici IPO323]
Length = 503
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF + ++PWLI + +K PT IQKA IP +L DCIG ++TGSGKT+AF L
Sbjct: 68 DAKSSFKSIGVDPWLIASLSHLSIKFPTRIQKACIPEILAGRDCIGGSRTGSGKTIAFGL 127
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+W P GIFALVLTPTRELA QI +QF +G ++ ++TGG M +Q ELA
Sbjct: 128 PILQQWARQPSGIFALVLTPTRELALQIYEQFQAIGGGQGIKCVLVTGGAHMRNQALELA 187
Query: 123 KKPHIVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
K+PHIVIATPGRLADH+ + + L + KF+VLDEADRL
Sbjct: 188 KRPHIVIATPGRLADHISSSGEDTIYGLRKCKFVVLDEADRL 229
>gi|268529640|ref|XP_002629946.1| Hypothetical protein CBG03667 [Caenorhabditis briggsae]
Length = 565
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 118/156 (75%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F++L ++ W+ +Q QT+ +KT T +Q A IP +L+ D +GCA+TG+GKTLAFA+PIL
Sbjct: 93 RKFSELGVSSWITQQLQTMHIKTATPVQAACIPRILDGSDILGCARTGTGKTLAFAIPIL 152
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK DPYGI+AL+LTPTRELA+QI DQF +GK + L+ S+I GG ++ Q +EL+++P
Sbjct: 153 QKLSIDPYGIYALILTPTRELAFQIADQFTAVGKPITLKCSVIVGGRSLIHQARELSERP 212
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL D +++ +I+F VLDEADR+
Sbjct: 213 HIVVATPGRLTDLIESDPEVIAKKIQFFVLDEADRM 248
>gi|354546093|emb|CCE42822.1| hypothetical protein CPAR2_204650 [Candida parapsilosis]
Length = 443
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 109/157 (69%), Gaps = 3/157 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL + WL + + PT IQ A IP +L +DCIG AKTGSGKT+AFA P+L +
Sbjct: 6 FQDLGVARWLSESLVAMKIHKPTSIQAACIPAILKGQDCIGGAKTGSGKTIAFAAPMLTQ 65
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDPYGIF LVLTPTRELA QI +Q+ LG MN++V ++ GG D V Q EL KKPH
Sbjct: 66 WSEDPYGIFGLVLTPTRELALQIAEQYTALGAQMNIKVCVVVGGEDFVKQALELQKKPHF 125
Query: 128 VIATPGRLADHLDTC--NTFS-LNRIKFLVLDEADRL 161
VIATPGRLADH+ T S L R+++LVLDEADRL
Sbjct: 126 VIATPGRLADHILNSGEETISGLRRVRYLVLDEADRL 162
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 106/158 (67%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F L L L+ + +G KTPT+IQ +PH L D IG A TGSGKT AFALP
Sbjct: 15 PPVTFKSLGLIDPLLEALEQVGYKTPTDIQVESLPHALEGRDIIGVASTGSGKTAAFALP 74
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQK EDP G+FA VL PTRELAYQI QF LG M R ++I GGMDM Q LAK
Sbjct: 75 ILQKLWEDPKGLFACVLAPTRELAYQISQQFESLGSAMGARCAVIVGGMDMPAQAIALAK 134
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+PHIV+ATPGRL HL+ FSL IKFLVLDEADRL
Sbjct: 135 RPHIVVATPGRLMQHLEETKGFSLRSIKFLVLDEADRL 172
>gi|241958758|ref|XP_002422098.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645443|emb|CAX40099.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 440
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL + WL + + TPT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFNDLGVARWLSESLDAMKIYTPTSIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIF L+LTPTRELA QI +QF LG MN++V+++ GG D V Q L +KPH
Sbjct: 62 RWSEDPFGIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKPH 121
Query: 127 IVIATPGRLADHLDTC--NTFS-LNRIKFLVLDEADRL 161
VIATPGRLADH+ T S L R+K+LVLDEADRL
Sbjct: 122 FVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRL 159
>gi|301122021|ref|XP_002908737.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262099499|gb|EEY57551.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 518
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L ++PWL+++C+ +G++ PT +Q IP +L D IGCA+TGSGKT AFALPIL
Sbjct: 53 SFLNLGVDPWLVKRCELLGIRHPTPVQAHCIPPILAGRDVIGCAQTGSGKTAAFALPILH 112
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+DPYG +ALVLTPTRELA+QI DQF G M +R ++I GG+DM+ Q L ++PH
Sbjct: 113 TLSKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLTLQQRPH 172
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
I++ATPGR DHL + +++ +K++VLDEADRL S L F F
Sbjct: 173 IIVATPGRFRDHLLRADPPNISLVKYVVLDEADRLLDVSFAKDLSFIF 220
>gi|68487950|ref|XP_712192.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|68488947|ref|XP_711718.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|74656119|sp|Q59PR3.1|DBP8_CANAL RecName: Full=ATP-dependent RNA helicase DBP8
gi|46433039|gb|EAK92496.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|46433563|gb|EAK92999.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|238880002|gb|EEQ43640.1| hypothetical protein CAWG_01884 [Candida albicans WO-1]
Length = 440
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL + WL + + TPT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIF L+LTPTRELA QI +QF LG MN++V+++ GG D V Q L +KPH
Sbjct: 62 QWSEDPFGIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKPH 121
Query: 127 IVIATPGRLADHLDTC--NTFS-LNRIKFLVLDEADRL 161
VIATPGRLADH+ T S L R+K+LVLDEADRL
Sbjct: 122 FVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRL 159
>gi|345564525|gb|EGX47487.1| hypothetical protein AOL_s00083g423 [Arthrobotrys oligospora ATCC
24927]
Length = 451
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 3/157 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L + PWL+ + +K PT IQ A IP +L ++CIG ++TGSGKT+AFA+PILQ
Sbjct: 5 FASLGVKPWLVTSLGAMAIKRPTPIQAACIPEILKGKNCIGGSRTGSGKTVAFAVPILQM 64
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W +DP+G+FAL+LTPTRELA Q+ +QF LG NL++S+I GG+DM Q L++KPH+
Sbjct: 65 WAQDPFGVFALILTPTRELALQLAEQFTALGSPQNLKLSLIIGGVDMRTQAISLSQKPHV 124
Query: 128 VIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
VIATPGRLADH+ + L R++ +V+DEADRL
Sbjct: 125 VIATPGRLADHIRSSGADTIAGLRRVRVVVMDEADRL 161
>gi|353234580|emb|CCA66604.1| related to ATP-dependent helicase involved in rRNA processing
[Piriformospora indica DSM 11827]
Length = 571
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 89/161 (55%), Positives = 119/161 (73%), Gaps = 6/161 (3%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED + +F +L ++P L+ + ++ PT +Q A IP +L DCIG AKTGSGKT+AFA
Sbjct: 101 EDAV-NFAELGVHPDLVTSLANMSIRRPTPVQAACIPALLQGLDCIGNAKTGSGKTVAFA 159
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PILQ+ +DPYGI+AL+LTPTRELA+QI DQF +LG N+R +I+ GGMDM+ Q EL
Sbjct: 160 IPILQQLMKDPYGIYALILTPTRELAFQIADQFAILGGPFNVRTAIVVGGMDMIAQAIEL 219
Query: 122 AKKPHIVIATPGRLADHLD-TCNTFSLNRIKFLVLDEADRL 161
+PH+V+ATPGRL DHL+ T T++L+R VLDEADRL
Sbjct: 220 ENRPHVVVATPGRLVDHLNSTSGTWNLSR----VLDEADRL 256
>gi|341882300|gb|EGT38235.1| hypothetical protein CAEBREN_08382 [Caenorhabditis brenneri]
Length = 554
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F L + W+ +Q QT+ +KT T +Q A IP +L+ D +GCA+TG+GKTLAFA+PIL
Sbjct: 80 KKFQQLGVASWITQQLQTMHIKTATPVQAACIPKILDGSDILGCARTGTGKTLAFAIPIL 139
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK DPYGIFAL+LTPTRELA+QI DQF+ +GK + L+ S+I GG ++ Q +EL+++P
Sbjct: 140 QKLSVDPYGIFALILTPTRELAFQIADQFVAVGKPITLKCSVIVGGRSLIQQARELSERP 199
Query: 126 HIVIATPGRLADHLDTCNTF---SLNRIKFLVLDEADRL 161
HIV+ATPGRLAD +++ +I+F VLDEADR+
Sbjct: 200 HIVVATPGRLADLIESDQDVIAKVFKKIQFFVLDEADRM 238
>gi|341902886|gb|EGT58821.1| hypothetical protein CAEBREN_15104 [Caenorhabditis brenneri]
Length = 554
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F L + W+ +Q QT+ +KT T +Q A IP +L+ D +GCA+TG+GKTLAFA+PIL
Sbjct: 82 KKFQQLGVASWITQQLQTMHIKTATPVQAACIPKILDGSDILGCARTGTGKTLAFAIPIL 141
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK DPYGIFAL+LTPTRELA+QI DQF+ +GK + L+ S+I GG ++ Q +EL+++P
Sbjct: 142 QKLSVDPYGIFALILTPTRELAFQIADQFVAVGKPITLKCSVIVGGRSLIQQARELSERP 201
Query: 126 HIVIATPGRLADHLDTCNTF---SLNRIKFLVLDEADRL 161
HIV+ATPGRLAD +++ +I+F VLDEADR+
Sbjct: 202 HIVVATPGRLADLIESDQDVIAKVFKKIQFFVLDEADRM 240
>gi|225560188|gb|EEH08470.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus G186AR]
Length = 539
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 112/160 (70%), Gaps = 3/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I SF L L PWL+ T+ +K PT IQKA IP +L DCIG ++TGSGKT+AFA PI
Sbjct: 108 ISSFASLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPI 167
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQKW EDP+GIFA++LTPTRELA QI +Q + +L+ +ITGG +M Q L+++
Sbjct: 168 LQKWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALSQR 227
Query: 125 PHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
PHIVIATPGRLADH+ + + LNR + +V DEADRL
Sbjct: 228 PHIVIATPGRLADHITSSGADTICGLNRTRVVVFDEADRL 267
>gi|366994109|ref|XP_003676819.1| hypothetical protein NCAS_0E03920 [Naumovozyma castellii CBS 4309]
gi|342302686|emb|CCC70462.1| hypothetical protein NCAS_0E03920 [Naumovozyma castellii CBS 4309]
Length = 437
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ WL Q + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 8 TFKSLGLSRWLQEALQAMKINQPTAIQKACIPEILKGRDCIGGAKTGSGKTVAFAAPMLT 67
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP G+F +VLTPTRELA QI +QF LG MN+RV+++ GG +VDQ +L KKPH
Sbjct: 68 KWSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVALVVGGESIVDQAIQLQKKPH 127
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+IATPGRLA H+ + + L R KFLVLDEAD L
Sbjct: 128 FIIATPGRLAHHIMSSGEDTIGGLKRAKFLVLDEADSL 165
>gi|384246378|gb|EIE19868.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 508
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
E P+ +F L ++ WL R C+++G+ PT++Q+ IP +L D +G A TGSGKT AF
Sbjct: 76 QEAPV-TFRSLGISEWLDRVCKSLGMVRPTQVQRGCIPAILGGRDVLGTAHTGSGKTAAF 134
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPILQ+ +PYGIFALVLTPTRELA Q+ DQF LG M+L +++ GG+DM Q K
Sbjct: 135 ALPILQRLAREPYGIFALVLTPTRELAMQLADQFRALGSGMSLTDAVVIGGLDMQSQAKA 194
Query: 121 LAKKPHIVIATPGRLAD----HLDTCNTFSLNRIKFLVLDEADRL 161
LA++PHI++ATPGRL D H D F NR+ FLVLDEADRL
Sbjct: 195 LAQRPHIIVATPGRLRDLLSAHADLAEGF--NRVAFLVLDEADRL 237
>gi|303317020|ref|XP_003068512.1| ATP-dependent RNA helicase DBP8, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108193|gb|EER26367.1| ATP-dependent RNA helicase DBP8, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 536
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L PWL+ + ++ PT IQ+A IP +L DCIG ++TGSGKT+AFA PIL
Sbjct: 107 SFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPILH 166
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIFA+VLTPTRELA QI +QF + +L+ +ITGG +M Q L+ +PH
Sbjct: 167 RWSEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPH 226
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+VIATPGRLADH+ T + LNR++ +VLDEADRL
Sbjct: 227 VVIATPGRLADHIKTSGQDTIYGLNRVRMVVLDEADRL 264
>gi|240278937|gb|EER42443.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus H143]
Length = 539
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 112/160 (70%), Gaps = 3/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I SF L L PWL+ T+ +K PT IQKA IP +L DCIG ++TGSGKT+AFA PI
Sbjct: 108 ISSFASLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPI 167
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQKW EDP+GIFA++LTPTRELA QI +Q + +L+ +ITGG +M Q L+++
Sbjct: 168 LQKWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALSQR 227
Query: 125 PHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
PHIVIATPGRLADH+ + + LNR + +V DEADRL
Sbjct: 228 PHIVIATPGRLADHITSSGADTICGLNRTRVVVFDEADRL 267
>gi|45190904|ref|NP_985158.1| AER301Cp [Ashbya gossypii ATCC 10895]
gi|74693373|sp|Q756G5.1|DBP8_ASHGO RecName: Full=ATP-dependent RNA helicase DBP8
gi|44983946|gb|AAS52982.1| AER301Cp [Ashbya gossypii ATCC 10895]
gi|374108383|gb|AEY97290.1| FAER301Cp [Ashbya gossypii FDAG1]
Length = 435
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 111/164 (67%), Gaps = 7/164 (4%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M D +F DL + WL ++ + PT IQKA IP +L DCIG AKTGSGKT+AF
Sbjct: 1 MSDSNSTFKDLGVAKWLAEALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAF 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
A P+L KW DP G+F +VLTPTRELA QI +QF LG VMN+RV+++ GG D+V Q E
Sbjct: 61 AAPMLTKWSADPCGMFGIVLTPTRELAMQIAEQFTALGSVMNIRVALVVGGEDIVSQALE 120
Query: 121 LAKKPHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
L +KPH +IATPGRLA H+ DT L R+++LVLDEAD
Sbjct: 121 LQRKPHFIIATPGRLAHHIMHSGEDTIG--GLKRVRYLVLDEAD 162
>gi|325090197|gb|EGC43507.1| ATP-dependent RNA helicase DBP8 [Ajellomyces capsulatus H88]
Length = 539
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 112/160 (70%), Gaps = 3/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I SF L L PWL+ T+ +K PT IQKA IP +L DCIG ++TGSGKT+AFA PI
Sbjct: 108 ISSFASLGLAPWLVGSLSTMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPI 167
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQKW EDP+GIFA++LTPTRELA QI +Q + +L+ +ITGG +M Q L+++
Sbjct: 168 LQKWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALSQR 227
Query: 125 PHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
PHIVIATPGRLADH+ + + LNR + +V DEADRL
Sbjct: 228 PHIVIATPGRLADHITSSGADTICGLNRTRVVVFDEADRL 267
>gi|119187445|ref|XP_001244329.1| hypothetical protein CIMG_03770 [Coccidioides immitis RS]
gi|118578050|sp|Q1E0Z3.1|DBP8_COCIM RecName: Full=ATP-dependent RNA helicase DBP8
gi|392871055|gb|EAS32917.2| ATP-dependent RNA helicase DBP8 [Coccidioides immitis RS]
Length = 536
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L PWL+ + ++ PT IQ+A IP +L DCIG ++TGSGKT+AFA PIL
Sbjct: 107 SFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPILH 166
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIFA+VLTPTRELA QI +QF + +L+ +ITGG +M Q L+ +PH
Sbjct: 167 RWSEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPH 226
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+VIATPGRLADH+ T + LNR++ +VLDEADRL
Sbjct: 227 VVIATPGRLADHIKTSGQDTIYGLNRVRMVVLDEADRL 264
>gi|348676065|gb|EGZ15883.1| hypothetical protein PHYSODRAFT_504921 [Phytophthora sojae]
Length = 445
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L ++PWL+++C+ +G++ PT +Q IP +L+ D IGCA+TGSGKT AFALPIL
Sbjct: 4 SFLNLGVDPWLVKRCELLGIRHPTPVQVHCIPPILSGRDVIGCAQTGSGKTAAFALPILH 63
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+DPYG +ALVLTPTRELA+QI DQF G M +R ++I GG+DM+ Q L ++PH
Sbjct: 64 TLSKDPYGPYALVLTPTRELAFQIADQFNAFGSSMAVRCAVIVGGVDMLKQSLTLQQRPH 123
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
I++ATPGR DHL +++ +K++VLDEADRL S L F F
Sbjct: 124 IIVATPGRFRDHLLRVEPPNISLVKYVVLDEADRLLDVSFAKDLSFIF 171
>gi|295671282|ref|XP_002796188.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284321|gb|EEH39887.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 543
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L PWL+ + +K PT IQKA IP +L DCIG ++TGSGKT+AFA PILQ
Sbjct: 114 SFATLGLAPWLVGSLSAMAIKRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPILQ 173
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIFA+VLTPTRELA QI +Q + +L+ +ITGG +M Q L+++PH
Sbjct: 174 KWSEDPLGIFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALSQRPH 233
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLADH+++ + LNR +F+VLDEADRL
Sbjct: 234 VVIATPGRLADHINSSGRDTICGLNRARFVVLDEADRL 271
>gi|392568267|gb|EIW61441.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 465
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 116/165 (70%), Gaps = 4/165 (2%)
Query: 11 LKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCE 70
+ ++ L+ + + PTEIQ A IP +L DCIG AKTGSGKT+AFALPILQK
Sbjct: 1 MGISSALVGALSKLSINAPTEIQAACIPPLLQGRDCIGNAKTGSGKTIAFALPILQKLSL 60
Query: 71 DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIA 130
DPYGIFALVLTPTRELA+QI +QF VLG ++LR +++ GG+DM+ Q EL +PH+V+A
Sbjct: 61 DPYGIFALVLTPTRELAFQIAEQFAVLGAPLSLRTAVVVGGIDMMAQALELGNRPHVVVA 120
Query: 131 TPGRLADHL-DTCNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
TPGR+ D L T + L+RIKFLVLDEADRL S L + F
Sbjct: 121 TPGRIVDLLRSTSGEWDLSRIKFLVLDEADRLLTSSFAPELSYLF 165
>gi|258563984|ref|XP_002582737.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908244|gb|EEP82645.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 538
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SFT L L PWL+ + ++ PT IQKA IP +L DCIG ++TGSGKT+AFA PIL
Sbjct: 109 SFTSLGLAPWLVGSLSAMAIRRPTAIQKACIPEILKGRDCIGGSRTGSGKTVAFAAPILH 168
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIFA+VLTPTRELA QI +QF + +L+ +ITGG +M Q L+ +PH
Sbjct: 169 RWSEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPH 228
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+VIATPGRLADH+ T F L+R++ +V DEADRL
Sbjct: 229 VVIATPGRLADHIKTSGEDTIFGLSRVRMVVFDEADRL 266
>gi|308484167|ref|XP_003104284.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
gi|308258253|gb|EFP02206.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
Length = 572
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 118/159 (74%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F++L ++ W+I+Q QT+ + T T +Q A IP +L+ D +GCA+TG+GKTLAFA+PIL
Sbjct: 40 KKFSELGVSSWIIQQLQTMHISTATPVQAACIPKILSGSDILGCARTGTGKTLAFAIPIL 99
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK DPYGI+AL+LTPTRELA+QI DQF +GK + L+ S+I GG ++ Q +EL+ +P
Sbjct: 100 QKLSIDPYGIYALILTPTRELAFQIADQFSAVGKPITLKCSVIVGGRSLIHQARELSDRP 159
Query: 126 HIVIATPGRLADHLDTCNTF---SLNRIKFLVLDEADRL 161
HIV+ATPGRLAD +++ +I+F VLDEADR+
Sbjct: 160 HIVVATPGRLADLINSDAEIIAKVFKKIQFFVLDEADRM 198
>gi|452988487|gb|EME88242.1| hypothetical protein MYCFIDRAFT_159470 [Pseudocercospora fijiensis
CIRAD86]
Length = 467
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL ++ WL+ + + + PT IQKA IP ++ DCIG ++TGSGKT+AFALPIL
Sbjct: 38 TFKDLGVDTWLVNSLRHLSITHPTRIQKATIPQIIAGRDCIGGSRTGSGKTIAFALPILH 97
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW ++P GIF LVLTPTRELA QI +QF +G LR ++TGG DM Q EL+K+PH
Sbjct: 98 KWAKEPSGIFGLVLTPTRELALQIFEQFQAIGGSQGLRCVLVTGGADMRAQAIELSKRPH 157
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+VIATPGRLADH++T L + +F+VLDEADRL
Sbjct: 158 VVIATPGRLADHVETSGEDTIHGLKKCRFVVLDEADRL 195
>gi|121705654|ref|XP_001271090.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034080|sp|A1CKJ0.1|DBP8_ASPCL RecName: Full=ATP-dependent RNA helicase dbp8
gi|119399236|gb|EAW09664.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 523
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ + SF+ L + PWL+ T+ V+ PT IQKA IP +LN +DCIG ++TGSGKT+AF
Sbjct: 88 LREEASSFSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILNGKDCIGGSRTGSGKTIAF 147
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP GIF L+LTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 148 SVPMLQKWAEDPLGIFGLILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQALA 207
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA +PH+V+ATPGRLADH+ + + L R++ +VLDEADRL
Sbjct: 208 LAGRPHVVVATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRL 251
>gi|149238864|ref|XP_001525308.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013494|sp|A5E0U9.1|DBP8_LODEL RecName: Full=ATP-dependent RNA helicase DBP8
gi|146450801|gb|EDK45057.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 444
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 111/159 (69%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF +L + WL + + + +PT IQ A IP +L DCIG AKTGSGKT+AFA +L
Sbjct: 3 QSFKELGVAKWLSESLEAMKIHSPTSIQSACIPEILKGRDCIGGAKTGSGKTIAFAALML 62
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+W +DP+GIF L+LTPTRELA QI +QF LG +MN++V ++ GG D V Q EL KKP
Sbjct: 63 TQWSQDPFGIFGLILTPTRELALQIAEQFAALGALMNIKVCVVVGGEDFVKQTLELQKKP 122
Query: 126 HIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
H VIATPGRLADH+ + L RIK+LVLDEADRL
Sbjct: 123 HFVIATPGRLADHILNSGEETVSGLRRIKYLVLDEADRL 161
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ KSF DL + L C +G PT IQ IPH L + D IG A+TGSGKT AFA
Sbjct: 48 EEVTKSFKDLGVVDSLCDACANLGYTKPTPIQAQSIPHALANRDIIGLAETGSGKTAAFA 107
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP++Q E P F LVL PTRELA QIG QF LG +++LR ++I GG+DMV Q L
Sbjct: 108 LPVIQALLEKPQAFFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLDMVAQAIAL 167
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH++IATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 GKKPHVIIATPGRLVDHLEKTKGFSLRSLKYLVMDEADRL 207
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 113/155 (72%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL LN L + C+ + K P++IQK IP L +D IG A+TGSGKT AFALPILQ
Sbjct: 56 TWKDLGLNETLCQACEELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGKTGAFALPILQ 115
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +LAKKPH
Sbjct: 116 ALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH 175
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 176 IIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 210
>gi|400602623|gb|EJP70225.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 545
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 113/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F L + PWL++ + ++ PT IQK +P +L DCIG ++TGSGKT+AFA+
Sbjct: 111 DPNTTFAALGVRPWLVQSLANMAIRRPTGIQKGCVPEILRGRDCIGGSRTGSGKTVAFAV 170
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQKW EDP +F +VLTPTRELA QI +QF + +L+V +ITGG DM Q L
Sbjct: 171 PMLQKWAEDPSAVFGVVLTPTRELALQIYEQFRAVAAPQSLKVVLITGGADMRPQAIALK 230
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PHI+IATPGRLADH+ T + L R++F+VLDEADRL
Sbjct: 231 QRPHIIIATPGRLADHVRTSGEDTVCGLRRVRFIVLDEADRL 272
>gi|325193328|emb|CCA27668.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
gi|325193516|emb|CCA27823.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 502
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 114/156 (73%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF L +N WL+++C IG+ TPT +Q+ IP +L+ + +G A+TGSGKT AFALPIL
Sbjct: 44 ESFESLGINSWLVKKCSQIGMTTPTTVQQHCIPAILDGRNVLGVAQTGSGKTAAFALPIL 103
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
DPYG FA++LTPTRELA+QI DQ + G +R ++I GGMDM++Q +L ++P
Sbjct: 104 HSLSMDPYGPFAVILTPTRELAFQIADQMNIFGTFTGVRCAVIVGGMDMLEQKMKLQQQP 163
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI+IATPGRL DHL + +L+ +KFLVLDEADRL
Sbjct: 164 HIIIATPGRLHDHLMHPDAPNLSLVKFLVLDEADRL 199
>gi|351713807|gb|EHB16726.1| Putative ATP-dependent RNA helicase DDX49 [Heterocephalus glaber]
Length = 453
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/117 (73%), Positives = 97/117 (82%)
Query: 45 DCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLR 104
DC+GCAKTGSGKT AF LPILQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+
Sbjct: 21 DCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLK 80
Query: 105 VSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
II GGMDMV Q EL++KPH+VIATPGRLADHL + NTF + +I FLV+DEADRL
Sbjct: 81 DCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFHIKKIHFLVMDEADRL 137
>gi|91206551|sp|Q2UKX3.1|DBP8_ASPOR RecName: Full=ATP-dependent RNA helicase dbp8
gi|83767653|dbj|BAE57792.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 443
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 114/156 (73%), Gaps = 3/156 (1%)
Query: 9 TDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKW 68
T L ++PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AFA+PILQKW
Sbjct: 16 TTLNVSPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFAVPILQKW 75
Query: 69 CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIV 128
+DP+GIFA+VLTPTRELA QI +Q + +++ +ITGG DM Q L+++PH+V
Sbjct: 76 AQDPFGIFAVVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRSQALALSQRPHVV 135
Query: 129 IATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
IATPGRLADH++T + L R++ +VLDEADRL
Sbjct: 136 IATPGRLADHINTSGEDTVCGLKRVRMVVLDEADRL 171
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ KSF DL + L C +G PT IQ IPH L + D IG A+TGSGKT AFA
Sbjct: 48 EEVTKSFKDLGVADSLCDACANLGYTKPTPIQAQSIPHALANRDIIGLAETGSGKTAAFA 107
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP++Q E P F LVL PTRELA QIG QF LG +++LR ++I GG+DMV Q L
Sbjct: 108 LPVIQALLEKPQAFFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLDMVAQAIAL 167
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH+++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 GKKPHVIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRL 207
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 110/154 (71%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L + L+ + + K PT+IQ +PH ++ D IG A+TGSGKT+AFALPILQ+
Sbjct: 17 FKELGVIGPLLEALEQMNFKKPTDIQAEALPHAISGRDIIGVAETGSGKTVAFALPILQR 76
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P G+FA VL PTRELAYQI QF LG + +R ++I GGM+MVDQ LAK+PHI
Sbjct: 77 LWEEPKGLFACVLAPTRELAYQISQQFESLGSAIGVRCAVIVGGMNMVDQAVALAKRPHI 136
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRL DHL+ FSL IKFLVLDEADRL
Sbjct: 137 VVATPGRLNDHLENTKGFSLRGIKFLVLDEADRL 170
>gi|330803884|ref|XP_003289931.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
gi|325079973|gb|EGC33549.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
Length = 501
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F L L PWLIR C+ + K P+ IQ IP ++N D I AKTGSGKT +FA+PIL
Sbjct: 5 KFFESLGLAPWLIRSCKQLNFKNPSNIQYNTIPEIINGRDIIASAKTGSGKTASFAIPIL 64
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
EDPYG+FA+VLTPTRELA QI +QF +G MN++VS + GG+D V Q L K+P
Sbjct: 65 NLLSEDPYGVFAVVLTPTRELAVQIAEQFSAIGAPMNVQVSTVIGGIDTVKQALILDKRP 124
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRLA HL +L KFLVLDEADRL
Sbjct: 125 HIIVATPGRLASHLTNGLKIALKFCKFLVLDEADRL 160
>gi|119186961|ref|XP_001244087.1| hypothetical protein CIMG_03528 [Coccidioides immitis RS]
gi|118595828|sp|Q1E1N5.1|RRP3_COCIM RecName: Full=ATP-dependent rRNA helicase RRP3
gi|392870806|gb|EAS32639.2| ATP-dependent rRNA helicase RRP3 [Coccidioides immitis RS]
Length = 474
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C ++G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 48 KSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 107
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI QF LG ++++R ++I GGMDMV Q L KKP
Sbjct: 108 QALMDKPQSMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKP 167
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 203
>gi|303317380|ref|XP_003068692.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108373|gb|EER26547.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 474
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C ++G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 48 KSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 107
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI QF LG ++++R ++I GGMDMV Q L KKP
Sbjct: 108 QALMDKPQSMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKP 167
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 203
>gi|388578792|gb|EIM19128.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 438
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 108/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL L L++ C+ +G K PTEIQ+ IP+ L D IG A+TGSGKT AFALP++Q
Sbjct: 5 SFKDLNLIDDLVKNCERLGYKQPTEIQQQSIPYSLQSRDIIGLAQTGSGKTAAFALPVIQ 64
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++P F VL PTRELAYQI +QF LG + LR + I GGMDM+ Q L+KKPH
Sbjct: 65 LLYDNPAPYFCCVLAPTRELAYQISEQFEALGSNIGLRTATIVGGMDMMTQSIALSKKPH 124
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL DHL+ FSL IKFLV+DEADRL
Sbjct: 125 IIVATPGRLHDHLENTKGFSLRNIKFLVMDEADRL 159
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C ++G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 48 KSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 107
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI QF LG ++++R ++I GGMDMV Q L KKP
Sbjct: 108 QALMDKPQSMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKP 167
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 203
>gi|66826815|ref|XP_646762.1| hypothetical protein DDB_G0270396 [Dictyostelium discoideum AX4]
gi|74897375|sp|Q55BR9.1|DDX49_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx49; AltName:
Full=DEAD box protein 49
gi|60474611|gb|EAL72548.1| hypothetical protein DDB_G0270396 [Dictyostelium discoideum AX4]
Length = 508
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L WL+ C+ +G K P+ IQ IP +L D I AKTGSGKT +FA+PIL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ EDPYG+FA++LTPTRELA QIG+QF +G MN+ S++ GG+D V Q L K+P
Sbjct: 64 NQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRP 123
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRLA HL+ +L KFLVLDEADRL
Sbjct: 124 HIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRL 159
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 115/159 (72%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ ++++ DL LN L + C+ + K P++IQK IP L +D IG A+TGSGKT AFAL
Sbjct: 56 EQLQTWKDLGLNETLCKACEELKWKAPSKIQKEAIPVALQGKDIIGLAETGSGKTGAFAL 115
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +LA
Sbjct: 116 PILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLA 175
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 176 KKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRI 214
>gi|226288804|gb|EEH44316.1| ATP-dependent rRNA helicase RRP3 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 108/160 (67%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E KSF DL + L C+ +G KTPT IQ IP L D IG A+TGSGKT AFA
Sbjct: 52 ETATKSFKDLGVIDSLCEACEALGYKTPTPIQTEAIPLALQGRDLIGLAETGSGKTAAFA 111
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ + P +F LVL PTRELAYQI + F LG ++++R ++I GGMDMV Q L
Sbjct: 112 LPILQALMDKPQSLFGLVLAPTRELAYQISEAFEALGSLISVRCAVIVGGMDMVPQAIAL 171
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 GKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 211
>gi|159467789|ref|XP_001692074.1| hypothetical protein CHLREDRAFT_128577 [Chlamydomonas reinhardtii]
gi|158278801|gb|EDP04564.1| predicted protein [Chlamydomonas reinhardtii]
Length = 488
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 113/161 (70%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ D F L L+ WL C+++G+ PT++Q+ IP +L D IG A+TGSGKT AF
Sbjct: 100 LSDVPTDFKGLGLSEWLCGVCKSLGMSQPTDVQRGCIPAILKGRDVIGLAQTGSGKTAAF 159
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPILQ +DPYG+FALVLTPTRELA QI +QF LG M L+ ++ GG+DM Q +E
Sbjct: 160 ALPILQALAKDPYGVFALVLTPTRELAVQISEQFRALGAGMRLKELVVIGGVDMQQQARE 219
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH+V+ATPGRLAD + + + R +FLVLDEADR+
Sbjct: 220 LAKRPHVVVATPGRLADWVMSGLAAGMARCRFLVLDEADRV 260
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 106/155 (68%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L+ + +G K+PTEIQ +PH L D IG A+TGSGKT AFALPILQ
Sbjct: 20 TFKSLGLIDPLLEALEQVGYKSPTEIQSESLPHALEGRDIIGVAETGSGKTAAFALPILQ 79
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E+P G+FA VL PTRELAYQI QF LG M R ++I GGMD+ Q LAK+PH
Sbjct: 80 KLWEEPKGLFACVLAPTRELAYQISQQFEALGAAMGARCAVIVGGMDLPTQAIALAKRPH 139
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRL HL+ FSL +KFLVLDEADRL
Sbjct: 140 VVVATPGRLLQHLEETKGFSLRTLKFLVLDEADRL 174
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 90/160 (56%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E P KSF DL + L C+ + K PT IQ+ IP L D IG A+TGSGKT AFA
Sbjct: 130 ETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFA 189
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P +F LVL PTRELA QIG F LG ++LR +++ GG+DMV Q L
Sbjct: 190 LPILQSLLEKPQPLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSTAL 249
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHIV+ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 250 GKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRL 289
>gi|302835956|ref|XP_002949539.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
gi|300265366|gb|EFJ49558.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
Length = 423
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 112/156 (71%), Gaps = 2/156 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL C+++G+ TPTE+Q+ IP +L D IG A+TGSGKT AFALPILQ
Sbjct: 40 FKSLGLSEWLCGVCKSLGMNTPTEVQRGCIPAILQGRDVIGLAQTGSGKTAAFALPILQV 99
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+DPYG+FALVLTPTRELA QI +QF LG M L+ +I GG+DM Q +ELA++PH+
Sbjct: 100 LAKDPYGVFALVLTPTRELAAQICEQFRALGAGMRLKELVIIGGVDMQHQARELARRPHV 159
Query: 128 VIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
V+ATPGRL LD S L+R +FLVLDEADR+
Sbjct: 160 VVATPGRLRGLLDADGGLSAGLSRTRFLVLDEADRV 195
>gi|258563612|ref|XP_002582551.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
gi|237908058|gb|EEP82459.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
Length = 472
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 108/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+++G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 46 KSFKDLGVIDSLCEACESLGYKAPTQIQAESIPLALQGRDVIGLAETGSGKTAAFALPIL 105
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI +Q LG ++++R ++I GGMDMV Q L KKP
Sbjct: 106 QALMDKPQSMFGLVLAPTRELAYQISEQVEALGSLISVRCAVIVGGMDMVSQAIALGKKP 165
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 166 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 201
>gi|327351047|gb|EGE79904.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis ATCC
18188]
Length = 553
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 86/162 (53%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF L L PWL+ + +K PT IQKA IP ++ DCIG ++TGSGKT+AFA
Sbjct: 118 DGSSSFASLGLAPWLVGSLSVMAIKRPTAIQKACIPEIIKGRDCIGGSRTGSGKTVAFAA 177
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP+G+FA++LTPTRELA QI +Q + +L+ +ITGG +M Q L+
Sbjct: 178 PILQKWAEDPFGVFAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALS 237
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ + + LNR + +VLDEADRL
Sbjct: 238 QRPHIVIATPGRLADHITSSGADTICGLNRTRVVVLDEADRL 279
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C T+G K PT IQ IP L D D IG A+TGSGKT AFALPIL
Sbjct: 53 KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPIL 112
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVL PTRELA+QI F LG +N+R ++I GGMDMV Q L KKP
Sbjct: 113 QALMDKPQSFFGLVLAPTRELAFQISQSFEALGSTINVRCAVIVGGMDMVSQSIALGKKP 172
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 173 HIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRL 208
>gi|430813904|emb|CCJ28790.1| unnamed protein product [Pneumocystis jirovecii]
Length = 464
Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 116/164 (70%), Gaps = 5/164 (3%)
Query: 3 DPI--KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
DP+ +F + L+ WLI + + +K PT IQ I +L ++CIG AKTGSGKT+AF
Sbjct: 37 DPLIPHTFKECGLHAWLIETLKKVSIKKPTAIQATCIGPILEGQNCIGSAKTGSGKTMAF 96
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
LPI+Q +DPYG+FAL+LTPTRELA QI DQ ++G +NL+ + I GG+DM+ Q
Sbjct: 97 TLPIIQILSQDPYGVFALILTPTRELALQISDQLAIIGTSINLKHTTIIGGVDMITQALI 156
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLN---RIKFLVLDEADRL 161
L K+PHIVIATPGRLADH+ + ++N R++FLVLDEADRL
Sbjct: 157 LVKRPHIVIATPGRLADHIRSSGQETINAFKRVRFLVLDEADRL 200
>gi|453088320|gb|EMF16360.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 507
Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 114/160 (71%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL ++PWLI + + + PT IQK+ IP +L +DCIG ++TGSGKT+AFALPILQ
Sbjct: 75 TFKDLGVSPWLIHALKNLSITNPTRIQKSTIPEILAGKDCIGGSRTGSGKTIAFALPILQ 134
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W ++P GI+AL+LTPTRELA QI +Q +G ++ ++TGG +M Q EL KKPH
Sbjct: 135 QWAKEPSGIYALILTPTRELALQIYEQIQAIGGNQGIKSVLVTGGAEMRKQAIELEKKPH 194
Query: 127 IVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ DT L ++KF+V DEADRL
Sbjct: 195 IVIATPGRLADHVLNSGEDTIR--GLKKVKFVVFDEADRL 232
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+T+G K+PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 56 KSFKDLGIIDSLCEACETLGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 115
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P +F L+L PTRELAYQI F LG ++++R ++I GGMDMV Q L KKP
Sbjct: 116 QALMEKPQSLFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDMVPQAIALGKKP 175
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 176 HIVVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 211
>gi|261194144|ref|XP_002623477.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
gi|239588491|gb|EEQ71134.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
Length = 465
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+T+G K+PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 56 KSFKDLGIIDSLCEACETLGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 115
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P +F L+L PTRELAYQI F LG ++++R ++I GGMDMV Q L KKP
Sbjct: 116 QALMEKPQSLFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDMVPQAIALGKKP 175
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 176 HIVVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 211
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 105/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L+ + K PT+IQ+ +PH L D IG A TGSGKT AFALPILQ
Sbjct: 15 TFKSLGLINPLLEALDQLKYKEPTDIQREALPHALEGRDIIGVASTGSGKTAAFALPILQ 74
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E+P G+FA VL PTRELAYQI QF LG M +R +++ GGMD++DQ LAKKPH
Sbjct: 75 KLWEEPRGLFACVLAPTRELAYQISQQFEALGSAMGVRCAVLVGGMDLIDQAVALAKKPH 134
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL HL FSL +KFLVLDEADRL
Sbjct: 135 IIVATPGRLQQHLTETKGFSLRGLKFLVLDEADRL 169
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+T+G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E+P F L+L PTRELA+QI F LG +N+R ++I GGMDMV Q L KKP
Sbjct: 112 QALMENPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRL 207
>gi|367016345|ref|XP_003682671.1| hypothetical protein TDEL_0G00930 [Torulaspora delbrueckii]
gi|359750334|emb|CCE93460.1| hypothetical protein TDEL_0G00930 [Torulaspora delbrueckii]
Length = 436
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 112/170 (65%), Gaps = 9/170 (5%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E + +F L L WL+ + + PT IQK IP ++ DCIG AKTGSGKT+AFA
Sbjct: 3 ESSVSTFKSLGLPRWLVDALSAMRITQPTSIQKGCIPAIMKGGDCIGGAKTGSGKTIAFA 62
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
P+L KW EDP G+F +VLTPTRELA QI +QF LG MN+RVSI+ GG +V Q EL
Sbjct: 63 APMLTKWSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSIVVGGESIVKQALEL 122
Query: 122 AKKPHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRLSLMTS 166
+KPH +IATPGRLA H+ DT L R KFLVLDEAD SL+TS
Sbjct: 123 QRKPHFIIATPGRLAHHILNSGEDTVG--GLMRAKFLVLDEAD--SLLTS 168
>gi|115532548|ref|NP_001040789.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
gi|351065690|emb|CCD61680.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
Length = 561
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 119/159 (74%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F+ L + W+ +Q QT+ +KT T +Q A IP +L D +GCA+TG+GKTLAFA+PIL
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK DPYGI+AL+LTPTRELA+QI +QF LGK + L+ S+I GG ++ Q +EL+++P
Sbjct: 149 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 208
Query: 126 HIVIATPGRLADHLDT-CNTFS--LNRIKFLVLDEADRL 161
H+V+ATPGRLAD +++ +T + +I+F VLDEADR+
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRM 247
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L+ C +G PT IQ IPH L + D IG A+TGSGKT AFALPI+
Sbjct: 53 KTFKDLGIVDSLVEACDRLGYTNPTPIQAQSIPHALQNRDVIGLAETGSGKTAAFALPII 112
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELA QI F LG ++NLRV++I GG+DMV Q L KKP
Sbjct: 113 QALLDKPSHLFGLVLAPTRELAAQIAASFEALGSLVNLRVAVIVGGLDMVAQAIALGKKP 172
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 173 HIVVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRL 208
>gi|261201117|ref|XP_002626959.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis SLH14081]
gi|239594031|gb|EEQ76612.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis SLH14081]
gi|239607095|gb|EEQ84082.1| ATP-dependent RNA helicase DBP8 [Ajellomyces dermatitidis ER-3]
Length = 553
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 86/162 (53%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF L L PWL+ + +K PT IQKA IP ++ DCIG ++TGSGKT+AFA
Sbjct: 118 DGSSSFASLGLAPWLVGSLSVMAIKRPTAIQKACIPEIIKGRDCIGGSRTGSGKTVAFAA 177
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP+G+FA++LTPTRELA QI +Q + +L+ +ITGG +M Q L+
Sbjct: 178 PILQKWAEDPFGVFAVILTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALS 237
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ + + LNR + +VLDEADRL
Sbjct: 238 QRPHIVIATPGRLADHITSSGADTICGLNRTRVVVLDEADRL 279
>gi|255544594|ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 502
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 113/163 (69%), Gaps = 6/163 (3%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D F++L L W +R C+ +G+K PT +Q IP +L +D +G A+TGSGKT FAL
Sbjct: 60 DETSLFSNLGLAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFAL 119
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL + EDPYGIFALV+TPTRELAYQ+ +QF LG +NLR +++ GGMD + Q K L
Sbjct: 120 PILHRLAEDPYGIFALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQAKTLM 179
Query: 123 KKPHIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRL 161
+PH+VIATPGR L D+ D + FS + KFLVLDEADR+
Sbjct: 180 ARPHVVIATPGRVKVLLEDNPDIPSVFS--KTKFLVLDEADRV 220
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
+D ++F L + P L + C T+ K PT IQ IP L D IG A+TGSGKT AF+
Sbjct: 42 DDSPRTFASLGIIPELCQSCATLAFKAPTPIQVEAIPSALQGRDVIGLAQTGSGKTAAFS 101
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQK E+P FAL+L PTRELAYQI Q LG + +R ++I GGMDM+ Q L
Sbjct: 102 LPILQKLWENPQPFFALILAPTRELAYQISQQVTSLGSPLGVRTAVIVGGMDMMSQSIAL 161
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PH+++ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 162 SKRPHVIVATPGRLMDHLENTKGFSLKNVKFLVMDEADRL 201
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E P KSF DL + L C+ + K PT IQ+ IP L D IG A+TGSGKT AFA
Sbjct: 106 ETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFA 165
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P +F LVL PTRELA QIG F LG ++LR +++ GG+DMV Q L
Sbjct: 166 LPILQSLLEKPQPLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSTAL 225
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHIV+ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 226 GKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRL 265
>gi|115532546|ref|NP_001040788.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
gi|351065689|emb|CCD61679.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
Length = 488
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 119/159 (74%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F+ L + W+ +Q QT+ +KT T +Q A IP +L D +GCA+TG+GKTLAFA+PIL
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
QK DPYGI+AL+LTPTRELA+QI +QF LGK + L+ S+I GG ++ Q +EL+++P
Sbjct: 149 QKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERP 208
Query: 126 HIVIATPGRLADHLDT-CNTFS--LNRIKFLVLDEADRL 161
H+V+ATPGRLAD +++ +T + +I+F VLDEADR+
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRM 247
>gi|402226538|gb|EJU06598.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 438
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/139 (61%), Positives = 106/139 (76%), Gaps = 1/139 (0%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ +K PTEIQ A +P +L ED IG AKTGSGKT+AFALPIL + DPYGIFAL+LTPT
Sbjct: 1 MSIKVPTEIQAACVPPLLRGEDVIGNAKTGSGKTIAFALPILHQLLLDPYGIFALILTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDT-C 142
RELA+QI DQF VLG +N R +++ GGMDM+ Q E+ +PHIV+ATPGRL D + +
Sbjct: 61 RELAFQIADQFAVLGSPLNARTAVVVGGMDMMAQAAEMRSRPHIVVATPGRLVDLMRSGS 120
Query: 143 NTFSLNRIKFLVLDEADRL 161
+SL R+KFLVLDEADRL
Sbjct: 121 GEWSLGRVKFLVLDEADRL 139
>gi|444316946|ref|XP_004179130.1| hypothetical protein TBLA_0B07950 [Tetrapisispora blattae CBS 6284]
gi|387512170|emb|CCH59611.1| hypothetical protein TBLA_0B07950 [Tetrapisispora blattae CBS 6284]
Length = 393
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 113/164 (68%), Gaps = 7/164 (4%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M + I +F +L L+ WL+ +++ + TPT IQK IP +L DCIG AKTGSGKT+AF
Sbjct: 1 MSNSITNFENLGLSRWLVESLKSMKITTPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAF 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
A P+L KW EDP G+FA++LTPTRELA QI +QF LG MN+RV ++ GG ++V Q E
Sbjct: 61 AGPMLTKWSEDPCGMFAVILTPTRELAMQIAEQFTALGSSMNIRVCLVVGGENIVKQALE 120
Query: 121 LAKKPHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
L KPH +IATPGRLA H+ DT F R K+LVLDEAD
Sbjct: 121 LQNKPHFIIATPGRLAHHILRSGEDTVGGFI--RCKYLVLDEAD 162
>gi|255719254|ref|XP_002555907.1| KLTH0H00638p [Lachancea thermotolerans]
gi|238941873|emb|CAR30045.1| KLTH0H00638p [Lachancea thermotolerans CBS 6340]
Length = 433
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L ++ WL+ Q + + PT IQKA IP +L +DCIG AKTGSGKT+AF P+L K
Sbjct: 5 FATLGISKWLVEALQAMKITQPTAIQKACIPQILQGKDCIGGAKTGSGKTIAFGAPMLTK 64
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RV+++ GG +VDQ L +KPH
Sbjct: 65 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVALVVGGESIVDQAINLQRKPHF 124
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
++ATPGR+A H+ DT L R KFLVLDEAD
Sbjct: 125 IVATPGRMAHHIMNSGEDTIG--GLKRAKFLVLDEAD 159
>gi|302696785|ref|XP_003038071.1| hypothetical protein SCHCODRAFT_47286 [Schizophyllum commune H4-8]
gi|300111768|gb|EFJ03169.1| hypothetical protein SCHCODRAFT_47286 [Schizophyllum commune H4-8]
Length = 441
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ ++ PT+IQ A IP +L DCIG AKTGSGKT+AFALPILQK DP+GIFALVLTPT
Sbjct: 1 MSIRAPTDIQAACIPPLLEGRDCIGNAKTGSGKTIAFALPILQKLSVDPFGIFALVLTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTC- 142
RELA+QI +QF VLG +++R ++I GGMD V Q EL ++PH+V+ATPGR+ DHL +
Sbjct: 61 RELAFQIAEQFAVLGAPLSVRTAVIVGGMDFVAQAIELGQRPHVVVATPGRIVDHLKSSG 120
Query: 143 NTFSLNRIKFLVLDEADRLSLMTSLKFFFFFF 174
+ L+R++ LVLDEADRL T + F
Sbjct: 121 GEWDLSRVRMLVLDEADRLLTSTFTPELSYLF 152
>gi|393216158|gb|EJD01649.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 446
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 115/152 (75%), Gaps = 4/152 (2%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ +++PTE+Q A IP +L DC+G A+TGSGKT+AFALPILQK DPYGI+ALVLTPT
Sbjct: 1 MSIRSPTEVQAACIPPLLAGMDCVGNAQTGSGKTIAFALPILQKLSFDPYGIYALVLTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCN 143
RELA+QI +QF VLG +N++ ++I GGMD + Q EL +PH+V+ATPGR+ DHL + +
Sbjct: 61 RELAFQISEQFAVLGAPLNIQTAVIVGGMDTIAQALELNNRPHVVVATPGRIVDHLKSSS 120
Query: 144 -TFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
+ L+R+KFLVLDEADRL + L++ F
Sbjct: 121 GEWDLSRVKFLVLDEADRLLTPTFAPELEYLF 152
>gi|225713694|gb|ACO12693.1| ATP-dependent RNA helicase T26G10.1 [Lepeophtheirus salmonis]
Length = 233
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ +F+DL L L C+++G KTP++IQK IP L D IG A+TGSGKT AFA
Sbjct: 30 EEDTTTFSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFA 89
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP+LQ E P FALVLTPTRELAYQI +QF LGK + ++ ++ GGMDMV Q L
Sbjct: 90 LPVLQSLLEKPQRFFALVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVL 149
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI+IATPGRL DH++ F L +K+L++DEA+R+
Sbjct: 150 GKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEANRI 189
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 60 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 119
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI QF LG V+ ++ ++I GGMDMV Q L KKP
Sbjct: 120 QALLDKPQPLFGLVLAPTRELAYQISQQFEALGSVIRVKCAVIVGGMDMVPQSIALGKKP 179
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 180 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 215
>gi|224098856|ref|XP_002311293.1| predicted protein [Populus trichocarpa]
gi|222851113|gb|EEE88660.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 114/157 (72%), Gaps = 5/157 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+DL L+ W ++ C+ +G+K PT++Q IP +L+ D +G A+TGSGKT AFALPIL +
Sbjct: 64 FSDLGLSEWALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPILHR 123
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDP+G+FALV+TPTRELAYQ+ +QF G ++LR +++ GGMD++ Q K L +PH+
Sbjct: 124 LAEDPFGVFALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMGRPHV 183
Query: 128 VIATPGR---LADHLDTCNTFSLNRIKFLVLDEADRL 161
VIATPGR L ++ D FS R KFLVLDEADRL
Sbjct: 184 VIATPGRIKVLLENPDISPVFS--RTKFLVLDEADRL 218
>gi|336469302|gb|EGO57464.1| hypothetical protein NEUTE1DRAFT_129408 [Neurospora tetrasperma
FGSC 2508]
gi|350291064|gb|EGZ72278.1| ATP-dependent RNA helicase dbp-8 [Neurospora tetrasperma FGSC 2509]
Length = 620
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/162 (52%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 186 DANTTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 245
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+W +P IF ++LTPTRELA QI +Q + L + L+ +ITGG DM Q +LA
Sbjct: 246 PILQQWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRKQAIDLA 305
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH+VIATPGRLADH+ T + L R+KF+VLDEADRL
Sbjct: 306 KRPHLVIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADRL 347
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 112/155 (72%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL LN L + C+ + K P++IQK IP L +D IG A+TGSGKT AFALPIL
Sbjct: 65 TWKDLGLNDTLCKACEELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGKTGAFALPILH 124
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +LAKKPH
Sbjct: 125 ALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH 184
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 185 IIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRI 219
>gi|119491751|ref|XP_001263370.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|134034081|sp|A1D6X9.1|DBP8_NEOFI RecName: Full=ATP-dependent RNA helicase dbp8
gi|119411530|gb|EAW21473.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 526
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ + SF L + PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AF
Sbjct: 91 LREEASSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAF 150
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP+GIF +VLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 151 SVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRPQAIA 210
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA +PH+VIATPGRLADH+ + + L R++ +VLDEADRL
Sbjct: 211 LAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRL 254
>gi|70999626|ref|XP_754530.1| ATP dependent RNA helicase (Dbp8) [Aspergillus fumigatus Af293]
gi|74674345|sp|Q4WXW1.1|DBP8_ASPFU RecName: Full=ATP-dependent RNA helicase dbp8
gi|66852167|gb|EAL92492.1| ATP dependent RNA helicase (Dbp8), putative [Aspergillus fumigatus
Af293]
Length = 526
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ + SF L + PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AF
Sbjct: 91 LREEASSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAF 150
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP+GIF +VLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 151 SVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRPQAIA 210
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA +PH+VIATPGRLADH+ + + L R++ +VLDEADRL
Sbjct: 211 LAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRL 254
>gi|440636147|gb|ELR06066.1| ATP-dependent RNA helicase dbp8 [Geomyces destructans 20631-21]
Length = 506
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L L PWL+ ++ ++ PT IQK IP +LN DCIG ++TGSGKT+AF
Sbjct: 82 DQNTTFDSLGLKPWLVNSLGSMAIRRPTGIQKGCIPEILNGRDCIGGSRTGSGKTVAFTA 141
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP GI+AL+LTPTRELA QI +Q + +L+ +ITGG+DM Q L+
Sbjct: 142 PILQKWAEDPIGIYALILTPTRELALQIYEQVKAISSPQSLKPILITGGVDMRPQALALS 201
Query: 123 KKPHIVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+PHIVIATPGRLADH+ T L R+K +VLDEADRL
Sbjct: 202 ARPHIVIATPGRLADHIRTSGEDTIIGLRRVKVVVLDEADRL 243
>gi|85084455|ref|XP_957309.1| hypothetical protein NCU06418 [Neurospora crassa OR74A]
gi|74654303|sp|Q7RYZ7.1|DBP8_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-8
gi|28918399|gb|EAA28073.1| hypothetical protein NCU06418 [Neurospora crassa OR74A]
Length = 626
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/162 (52%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 192 DANTTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 251
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+W +P IF ++LTPTRELA QI +Q + L + L+ +ITGG DM Q +LA
Sbjct: 252 PILQQWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRKQAIDLA 311
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH+VIATPGRLADH+ T + L R+KF+VLDEADRL
Sbjct: 312 KRPHLVIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADRL 353
>gi|367004050|ref|XP_003686758.1| hypothetical protein TPHA_0H01160 [Tetrapisispora phaffii CBS 4417]
gi|357525060|emb|CCE64324.1| hypothetical protein TPHA_0H01160 [Tetrapisispora phaffii CBS 4417]
Length = 433
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 107/159 (67%), Gaps = 7/159 (4%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF L L+ WL+ + + TPT IQ IP +LN DCIG AKTGSGKT+AFA P+L
Sbjct: 4 KSFKSLGLSKWLVEALNAMRISTPTAIQSNCIPAILNGRDCIGGAKTGSGKTVAFAAPML 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
KW EDP G+F ++LTPTRELA QI +QF LG MN+R+ ++ GG +V Q EL KKP
Sbjct: 64 TKWSEDPSGMFGVILTPTRELAMQIAEQFTALGASMNIRICLVVGGESIVKQALELQKKP 123
Query: 126 HIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
H +IATPGRLA H+ DT L R KFLVLDEAD
Sbjct: 124 HFIIATPGRLAHHIMASGEDTVG--GLIRTKFLVLDEAD 160
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+T+G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F L+L PTRELA+QI F LG +N+R ++I GGMDMV Q L KKP
Sbjct: 112 QALMEKPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRL 207
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L+ + +G K PT IQ+ IP L D IG A+TGSGKT AFALP+L
Sbjct: 61 KSFADLGVVESLVEATEALGYKHPTPIQEKSIPLALEGRDVIGLAETGSGKTAAFALPVL 120
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P G+FA+V+ PTRELA QI F LG ++NLR ++I GG+DMV Q L KKP
Sbjct: 121 QALLEKPSGLFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQAIALGKKP 180
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+V+ATPGRL DHL+ FSL +K+LVLDEADRL
Sbjct: 181 HVVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRL 216
>gi|406864929|gb|EKD17972.1| ATP-dependent RNA helicase DBP8 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 872
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF L + PWL+ + + + PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 110 DRQTSFASLDVKPWLVGALERMAINRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 169
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ W EDP+GIFA+VLTPTRELA QI +Q + L+ +ITGG DM Q LA
Sbjct: 170 PILQTWAEDPFGIFAVVLTPTRELALQIYEQIKAISSPQQLKAVLITGGSDMRPQATALA 229
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ T + L R++ +VLDEADRL
Sbjct: 230 QRPHIVIATPGRLADHIRTSGEDTICGLRRVRMVVLDEADRL 271
>gi|313229539|emb|CBY18354.1| unnamed protein product [Oikopleura dioica]
Length = 1616
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L ++ WL++ + +PTE+QKA I L D + C+KTGSGKT +FALPIL+
Sbjct: 2 SFSELGISKWLLKTLDDCKILSPTEVQKACIKPTLEGRDILACSKTGSGKTASFALPILE 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ EDPYG+FA+VLTPTRELA QI DQF + G MN+RV ++TGGMD Q L++KPH
Sbjct: 62 RLAEDPYGVFAVVLTPTRELASQIADQFKLFGTNMNVRVELVTGGMDQNKQTLMLSEKPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRLA+ L + N LN++KF V+DEADRL
Sbjct: 122 VIVATPGRLAELLSSTN-LRLNKVKFFVMDEADRL 155
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+T+G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F L+L PTRELA+QI F LG +N+R ++I GGMDMV Q L KKP
Sbjct: 112 QALMEKPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRL 207
>gi|50289845|ref|XP_447354.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690916|sp|Q6FQZ0.1|DBP8_CANGA RecName: Full=ATP-dependent RNA helicase DBP8
gi|49526664|emb|CAG60291.1| unnamed protein product [Candida glabrata]
Length = 437
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 110/159 (69%), Gaps = 7/159 (4%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F L L+ WL+ + ++TPT IQ IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 9 QNFRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPML 68
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+W EDP G+F +VLTPTRELA QI +QF LG MN+RV+++ GG +VDQ +L +KP
Sbjct: 69 TQWSEDPTGMFGIVLTPTRELAMQIAEQFTALGSYMNIRVALVVGGESIVDQALQLQRKP 128
Query: 126 HIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
H +IATPGRLA H+ DT L R+K+LVLDEAD
Sbjct: 129 HFIIATPGRLAHHILNSGDDTVG--GLKRVKYLVLDEAD 165
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 110/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E K+F DL + L C +G PT IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 32 ESTDKTFADLGVVDSLCEACTALGFTKPTAIQREAIPIALEGKDIIGLAETGSGKTAAFA 91
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ+ + P +F LVL PTRELAYQI QF LG ++++R ++I GGMDMV Q L
Sbjct: 92 LPILQELLDKPQPMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVPQAIAL 151
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIV+ATPGRL DHL+ FSL ++K+LV+DEADRL
Sbjct: 152 AKKPHIVVATPGRLLDHLENTKGFSLRQLKYLVMDEADRL 191
>gi|340905357|gb|EGS17725.1| hypothetical protein CTHT_0070680 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 613
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 84/162 (51%), Positives = 111/162 (68%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F L + PWL++ + ++ PT IQ+ IP +L DCIG ++TGSGKT+AF++
Sbjct: 179 DPNTTFESLGVAPWLVQSLANMAIRRPTPIQRESIPMLLKGRDCIGGSRTGSGKTVAFSV 238
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW E+P IFAL+LTPTRELA QI +Q + +L+ ++TGG DM Q LA
Sbjct: 239 PILQKWAENPSAIFALILTPTRELALQIFEQIKAISSPYSLKAILVTGGTDMRPQAIALA 298
Query: 123 KKPHIVIATPGRLADHLDTC---NTFSLNRIKFLVLDEADRL 161
+PHIVIATPGRLADH+ T L R++F+VLDEADRL
Sbjct: 299 SRPHIVIATPGRLADHIRTSGEDTVCGLRRVRFVVLDEADRL 340
>gi|449304690|gb|EMD00697.1| hypothetical protein BAUCODRAFT_29056 [Baudoinia compniacensis UAMH
10762]
Length = 517
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+PWLI + +K PT IQ A IP +L DCIG ++TGSGKT+AFA+PILQ
Sbjct: 87 TFARLGLDPWLIASLSHMAIKHPTRIQSASIPQILAGRDCIGGSRTGSGKTVAFAIPILQ 146
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W DP GI+A+VLTPTRELA QI +Q +G ++V ++TGG DM Q EL K+PH
Sbjct: 147 QWARDPSGIYAVVLTPTRELALQIYEQIAAVGARQGVKVCLVTGGADMRAQALELEKRPH 206
Query: 127 IVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRL 161
IV+ATPGRLA H++T L + +++VLDEADRL
Sbjct: 207 IVVATPGRLAHHVETSGDDTVRGLRKTRYVVLDEADRL 244
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E P KSF DL + L C+ + K PT IQ+ IP L D IG A+TGSGKT AFA
Sbjct: 106 ETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFA 165
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P +F LVL PTRELA QIG F LG ++LR +++ GG+DMV Q L
Sbjct: 166 LPILQSLLEKPQPLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSIAL 225
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHIV+ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 226 GKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRL 265
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 114/160 (71%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED ++ DL LN L + C + ++P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 64 EDQKLTWKDLGLNETLCQACDELKWRSPSKIQREAIPVALQGKDVIGLAETGSGKTGAFA 123
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +L
Sbjct: 124 LPILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQL 183
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 184 AKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 223
>gi|344303887|gb|EGW34136.1| hypothetical protein SPAPADRAFT_59553 [Spathaspora passalidarum
NRRL Y-27907]
Length = 431
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+DL + WL + + PT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFSDLGVAKWLSESLIAMKIHQPTPIQTACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
W DP GIF L+LTPTRELA QI +QF LG MN++VS+I GG D+V Q L + PH
Sbjct: 62 DWSADPRGIFGLILTPTRELALQIAEQFAALGSNMNIKVSVIVGGEDIVTQALALQRNPH 121
Query: 127 IVIATPGRLADHLDTC---NTFSLNRIKFLVLDEADRL 161
VIATPGRLADH+ L R+K+LVLDEADRL
Sbjct: 122 FVIATPGRLADHVLNSGEETVAGLKRVKYLVLDEADRL 159
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L+ + +G K PT IQ+ IP L D IG A+TGSGKT AFALP+L
Sbjct: 61 KSFADLGVVESLVEATEALGYKHPTPIQEKSIPLALAGRDVIGLAETGSGKTAAFALPVL 120
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P G+FA+V+ PTRELA QI F LG ++NLR ++I GG+DMV Q L KKP
Sbjct: 121 QALLEKPSGLFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQAIALGKKP 180
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+V+ATPGRL DHL+ FSL +K+LVLDEADRL
Sbjct: 181 HVVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRL 216
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E P+ ++ DL L+ L + C + K P++IQK IP L +D IG A+TGSGKT AFA
Sbjct: 54 EQPL-TWKDLGLSETLCKACDELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGKTGAFA 112
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E+P FALVLTPTRELA+QIG+QF LG + ++ +I GGMDMV QG +L
Sbjct: 113 LPILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVIVGGMDMVAQGLQL 172
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 173 AKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRI 212
>gi|336271421|ref|XP_003350469.1| hypothetical protein SMAC_02182 [Sordaria macrospora k-hell]
gi|380090134|emb|CCC11960.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 615
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 85/162 (52%), Positives = 111/162 (68%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 181 DANTTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 240
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+W +P IF L+LTPTRELA QI +Q + L + L+ +ITGG DM Q +LA
Sbjct: 241 PILQQWAANPSAIFGLILTPTRELALQIMEQVIALSQPHVLKAVLITGGSDMRKQAIDLA 300
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+PH+VIATPGRLADH+ T + L R+KF+VLDEADRL
Sbjct: 301 NRPHLVIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADRL 342
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 113/160 (70%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ ++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 57 EEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFA 116
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +L
Sbjct: 117 LPILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQL 176
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 177 AKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 216
>gi|359494643|ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
vinifera]
gi|297736137|emb|CBI24175.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F DL L W ++ C+ +G++ PT +Q IP +L +D +G A+TGSGKT AFALP
Sbjct: 49 PSSTFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALP 108
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
IL + EDP+G+FALV+TPTRELAYQ+ +QF LG ++LR +++ GGMDM++Q + L +
Sbjct: 109 ILHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQ 168
Query: 124 KPHIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRL 161
+PH+VIATPGR L + D F+ R KFLVLDEADR+
Sbjct: 169 RPHVVIATPGRVKVLLEQNPDIPAVFA--RTKFLVLDEADRV 208
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 111/155 (71%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFALPIL
Sbjct: 72 TWKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 131
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +LAKKPH
Sbjct: 132 ALLENPQRFFALVLTPTRELAFQIGEQFEALGSSIGIKCCVVVGGMDMVAQGLQLAKKPH 191
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 192 IIIATPGRLVDHLENMKGFNLKSIKYLVMDEADRI 226
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 112/160 (70%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED ++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 65 EDQKLTWKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFA 124
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +L
Sbjct: 125 LPILHALLESPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQL 184
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 185 AKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 224
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 112/160 (70%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED ++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 65 EDQKLTWKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFA 124
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +L
Sbjct: 125 LPILHALLESPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQL 184
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 185 AKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 224
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL L P L C+T+G K PT IQ IP L + D IG A+TGSGKT AFALPIL
Sbjct: 45 KTFKDLGLIPQLCEACETLGYKAPTAIQAESIPLALQNRDLIGLAETGSGKTAAFALPIL 104
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVL PTRELAYQI + F LG +++R ++ GGMDMV Q + K+P
Sbjct: 105 QALMDKPQPFFGLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAIAIGKRP 164
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 165 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 200
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 113/160 (70%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ ++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 57 EEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFA 116
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +L
Sbjct: 117 LPILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQL 176
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 177 AKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 216
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 115/159 (72%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L + WL+ C+ +G++ PT +Q+A +P +L +D +G A+TGSGKT AFALPILQ
Sbjct: 54 SFEELGVAEWLVGACKELGMRHPTPVQRACVPQILKGKDVLGMAQTGSGKTAAFALPILQ 113
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ E+PYGIFALV+TPTRELA+QI DQF LG ++LR +++ GGMDM Q + L ++PH
Sbjct: 114 RLGENPYGIFALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQILMERPH 173
Query: 127 IVIATPGRLADHL----DTCNTFSLNRIKFLVLDEADRL 161
+VIATPGR+ H+ D FS + KFLVLDEAD L
Sbjct: 174 VVIATPGRIKAHIGSDPDIAAAFS--KTKFLVLDEADLL 210
>gi|402083808|gb|EJT78826.1| ATP-dependent RNA helicase DBP8 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 571
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 89/162 (54%), Positives = 109/162 (67%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF L + PWL+R + +K PT IQK+ IP +L DCIG ++TGSGKT+AFA+
Sbjct: 137 DASTSFESLGVQPWLVRSLSNMAIKRPTGIQKSCIPEILKGRDCIGGSRTGSGKTIAFAV 196
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ W DP IFA+VLT TRELA QI +QF + L+ +ITGG DM Q LA
Sbjct: 197 PILQIWAHDPSAIFAVVLTATRELALQIYEQFKAISSPHVLKAILITGGSDMRPQAIALA 256
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++P IVIATPGRLADH+ T + L R+KFLVLDEADRL
Sbjct: 257 QRPAIVIATPGRLADHIRTSGEDTICGLKRVKFLVLDEADRL 298
>gi|281202503|gb|EFA76705.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1173
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F DL L PWL+ C+ +G K P+ IQ IP +L+ D + AKTG GKT AFALPIL
Sbjct: 660 RRFEDLGLAPWLLACCKQLGFKAPSNIQYNTIPAILSGRDILASAKTGQGKTAAFALPIL 719
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
EDPYGIFA+VLTPTRELA QIG+QF LG +N+ ++ GG+D V Q L K+P
Sbjct: 720 SALSEDPYGIFAVVLTPTRELAVQIGEQFRALGSAINVNCCVVIGGIDNVQQSLILDKRP 779
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRLA HL+ +L +FLVLDEADR+
Sbjct: 780 HIIVATPGRLAAHLNNGMKLALQFCRFLVLDEADRM 815
>gi|406603210|emb|CCH45247.1| ATP-dependent rRNA helicase RRP3 [Wickerhamomyces ciferrii]
Length = 488
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 108/159 (67%), Gaps = 4/159 (2%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I SF DLKL P L+ CQ + PT IQ IPH + D IG A+TGSGKT AFA+PI
Sbjct: 73 INSFKDLKLIPELLEACQALKFDKPTPIQAEAIPHGIEGRDLIGLAQTGSGKTAAFAIPI 132
Query: 65 LQK--WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
LQ + + PY FA VL PTRELAYQI D F LG M LR I GGMDM++Q ++L
Sbjct: 133 LQALWYAQTPY--FATVLAPTRELAYQIKDTFDALGSGMGLRSVCIVGGMDMMEQARDLM 190
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPH+++ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 191 RKPHVIVATPGRLMDHLEHLKGFSLRALKFLVMDEADRL 229
>gi|353241604|emb|CCA73408.1| probable DEAD box protein (putative RNA helicase) [Piriformospora
indica DSM 11827]
Length = 458
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 105/154 (68%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L P L++ + +G K T IQ IP L D D IG AKTGSGKT AFALPILQK
Sbjct: 33 FNTLGLIPELLQTVEALGYKNATSIQAQAIPSALQDRDIIGVAKTGSGKTAAFALPILQK 92
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP ++A +L PTRELAYQI QF LG + +R I GG+D++ Q LAK+PHI
Sbjct: 93 WWEDPKPLYACILAPTRELAYQIQKQFEALGANLGVRCCCIVGGLDIMAQKVALAKRPHI 152
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRL DHL+ FSL +K+LVLDEADRL
Sbjct: 153 VVATPGRLQDHLENTKGFSLRSLKYLVLDEADRL 186
>gi|302656972|ref|XP_003020220.1| ATP-dependent RNA helicase, putative [Trichophyton verrucosum HKI
0517]
gi|291184030|gb|EFE39602.1| ATP-dependent RNA helicase, putative [Trichophyton verrucosum HKI
0517]
Length = 528
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L PWL+ + + +K PT IQK+ IP ++ DCIG ++TGSGKT+AFA PIL
Sbjct: 100 SFSSLGLAPWLVSSLKAMEIKRPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAAPILH 159
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GI+A++LTPTRELA QI +Q + +L+ +ITGG DM Q L+++PH
Sbjct: 160 KWSEDPFGIYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIGLSQRPH 219
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R++ +VLDEADRL
Sbjct: 220 IVIATPGRLADHIKSSGEDTIIGLKRVRMVVLDEADRL 257
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 113/160 (70%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
+D ++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 65 DDQKLTWKDLGLNETLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFA 124
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +L
Sbjct: 125 LPILHALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQL 184
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 185 AKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 224
>gi|449444278|ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus]
gi|449475871|ref|XP_004154575.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus]
Length = 491
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 115/159 (72%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL L+ W+I+ C+ + +K PT +Q IP +L D +G A+TGSGKT AFALPILQ
Sbjct: 57 TFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 116
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ E P+G+FALV+TPTRELAYQ+ +QF LG +NLR S++ GGMDM++Q + L K+PH
Sbjct: 117 RLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPH 176
Query: 127 IVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRL 161
IVIATPGR L D+ D FS + KFLVLDEADR+
Sbjct: 177 IVIATPGRIKVLLEDNPDIPVVFS--KTKFLVLDEADRV 213
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 111/155 (71%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFALPIL
Sbjct: 66 TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 125
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +LAKKPH
Sbjct: 126 ALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH 185
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 186 IIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 220
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 103/158 (65%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F L L L+ + + K PTEIQ +PH L D IG A TGSGKT AF LP
Sbjct: 15 PPPTFESLGLIKPLLESLEQLNFKIPTEIQVEALPHALEGRDIIGVAATGSGKTAAFGLP 74
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQK E+P G+FA VL PTRELAYQI Q LG M R ++I GGMDM Q LAK
Sbjct: 75 ILQKLWEEPKGLFACVLAPTRELAYQISQQLESLGSAMGARCAVIVGGMDMPAQAIALAK 134
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+PHIV+ATPGRL DHL+ F+L IKFLVLDEADRL
Sbjct: 135 RPHIVVATPGRLMDHLEKTKGFNLRNIKFLVLDEADRL 172
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 111/155 (71%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL LN L + C + K P++IQ+ IP L +D IG A+TGSGKT AFALPIL
Sbjct: 66 TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 125
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FALVLTPTRELA+QIG+QF LG + ++ ++ GGMDMV QG +LAKKPH
Sbjct: 126 ALLENPQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPH 185
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 186 IIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 220
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 48 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 107
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELAYQI F LG M +R +I GGMDMV Q L KKP
Sbjct: 108 QALMEKPQPFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSISLGKKP 167
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 203
>gi|326470936|gb|EGD94945.1| ATP-dependent RNA helicase DBP8 [Trichophyton tonsurans CBS 112818]
gi|326478499|gb|EGE02509.1| ATP-dependent RNA helicase DBP8 [Trichophyton equinum CBS 127.97]
Length = 528
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L PWL+ + + +K PT IQK+ IP ++ DCIG ++TGSGKT+AFA PIL
Sbjct: 100 SFSSLGLAPWLVSSLKAMEIKRPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAAPILH 159
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GI+A++LTPTRELA QI +Q + +L+ +ITGG DM Q L+++PH
Sbjct: 160 KWSEDPFGIYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIGLSQRPH 219
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R++ +VLDEADRL
Sbjct: 220 IVIATPGRLADHIKSSGEDTIIGLRRVRMVVLDEADRL 257
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 48 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPIL 107
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELAYQI F LG M +R +I GGMDMV Q L KKP
Sbjct: 108 QALMEKPQPFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSISLGKKP 167
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 203
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P+KSF +L + L C+ +G K PT IQ IP L +D IG A+TGSGKT AFA+P
Sbjct: 80 PLKSFKELGVMDSLCEACENLGYKNPTSIQVESIPVALEGKDLIGLAETGSGKTAAFAIP 139
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQ ++P G+FA +L PTRELA+QI +QF LG + +R ++I GGMDM+ Q L K
Sbjct: 140 ILQALWDNPTGLFACILAPTRELAFQISEQFEALGGGIGVRSAVIVGGMDMMTQSVALGK 199
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 200 KPHILVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 237
>gi|298709765|emb|CBJ31567.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 614
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 81/155 (52%), Positives = 112/155 (72%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L WL+ C+ +G + PT +Q+ IP VL +D +GCA+TGSGKT AFALPIL
Sbjct: 111 TFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKDVLGCAETGSGKTAAFALPILH 170
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +DPYG+FA+VLTPTRELA QI +QF LG +M LR +++ GG+ +++Q L+ +PH
Sbjct: 171 ELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPH 230
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRL DHL +L + ++LVLDEADRL
Sbjct: 231 VVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRL 265
>gi|367026946|ref|XP_003662757.1| hypothetical protein MYCTH_115944 [Myceliophthora thermophila ATCC
42464]
gi|347010026|gb|AEO57512.1| hypothetical protein MYCTH_115944 [Myceliophthora thermophila ATCC
42464]
Length = 515
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L L PWL++ + +K PT IQ+ IP +L DCIG ++TGSGKT+AFA+
Sbjct: 81 DANTTFESLGLRPWLVQSLANMAIKRPTAIQRESIPMLLKGRDCIGGSRTGSGKTVAFAV 140
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW E+P IFA++LTPTRELA QI +Q + +L+ ++TGG DM Q LA
Sbjct: 141 PILQKWAENPSAIFAVILTPTRELALQIYEQIKAISAPHSLKAILVTGGADMRSQAIALA 200
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++PH+VIATPGRLADH+ T + L R++F+VLDEADRL
Sbjct: 201 QRPHVVIATPGRLADHIRTSGEDTICGLRRVRFVVLDEADRL 242
>gi|147772471|emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
Length = 592
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 115/162 (70%), Gaps = 6/162 (3%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F DL L W ++ C+ +G++ PT +Q IP +L +D +G A+TGSGKT AFALP
Sbjct: 152 PSSTFADLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALP 211
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
IL + EDP+G+FALV+TPTRELAYQ+ +QF LG ++LR +++ GGMDM++Q + L +
Sbjct: 212 ILHRLAEDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQ 271
Query: 124 KPHIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRL 161
+PH+VIATPGR L + D F+ R KFLVLDEADR+
Sbjct: 272 RPHVVIATPGRVKVLLEQNPDIPAVFA--RTKFLVLDEADRV 311
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 56 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 115
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI F LG ++ ++ ++I GGMDMV Q L KKP
Sbjct: 116 QSLLDKPQPLFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAIALGKKP 175
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 176 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 211
>gi|428181028|gb|EKX49893.1| hypothetical protein GUITHDRAFT_159399 [Guillardia theta CCMP2712]
Length = 413
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 114/158 (72%), Gaps = 2/158 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F+ L + WL+ C +G+K PT++Q IP L + + A+TGSGKT AFALPI+
Sbjct: 7 REFSSLGIENWLVAACNAVGLKRPTDVQWNCIPPALAGRNILASAETGSGKTAAFALPII 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ +DPYG+FA+VLTPTRELA+QI DQF+ LG + LR ++ GG+DM+ Q EL K+P
Sbjct: 67 QQLSKDPYGVFAVVLTPTRELAFQIQDQFVALGSRIQLRNCVVVGGLDMMKQAVELCKRP 126
Query: 126 HIVIATPGRLADHLDTCNTF--SLNRIKFLVLDEADRL 161
H+VIATPGRL+DH+++ + +L R + +VLDEADRL
Sbjct: 127 HVVIATPGRLSDHINSSSGVKEALARTRVVVLDEADRL 164
>gi|344303537|gb|EGW33786.1| ATP-dependent rRNA helicase RRP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 475
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF++LKL P L+ Q++ PT IQ IPH L D IG A+TGSGKT AFA+PIL
Sbjct: 63 KSFSELKLVPELLESIQSMKFTKPTPIQSEAIPHALEGHDIIGLAQTGSGKTAAFAIPIL 122
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E FALVL PTRELA+QI + F LG M LR I GGMDM+DQ ++L +KP
Sbjct: 123 QALWEAQSPYFALVLAPTRELAFQIKETFDALGSTMGLRSVCIVGGMDMMDQARDLMRKP 182
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGR+ DHL+T F L +K+LV+DEADRL
Sbjct: 183 HVIVATPGRIMDHLETTKGFKLKDLKYLVMDEADRL 218
>gi|357451623|ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355485136|gb|AES66339.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 513
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 119/177 (67%), Gaps = 9/177 (5%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ +F+DL L+ W ++ C+ +G+KTP +Q+ IP +L IG +TGSGKT AFA
Sbjct: 48 ENTTATFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFA 107
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ+ E +G+FALV+TPTRELA+Q+ +QF LG + LR++++ GGMDM+ Q KEL
Sbjct: 108 LPILQRLAEHTFGVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKEL 167
Query: 122 AKKPHIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADR---LSLMTSLKFFF 171
+PH+VIATPGR L D+ + F+ R KFLVLDEADR + LKF F
Sbjct: 168 VARPHLVIATPGRIKVLLKDNPEIAPVFA--RTKFLVLDEADRVLDVGFQDELKFIF 222
>gi|302690998|ref|XP_003035178.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
gi|300108874|gb|EFJ00276.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
Length = 449
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L+ + K PTEIQ +PH L D IG A TGSGKT AFALPILQ
Sbjct: 15 TFKSLGLIDPLLEALDKMSFKAPTEIQAQALPHALEGRDIIGVASTGSGKTAAFALPILQ 74
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K +DP G+FA VL PTRELAYQI QF LG M +R ++I GG D++ Q LAK+PH
Sbjct: 75 KLWDDPKGLFACVLAPTRELAYQISQQFEALGSAMGVRCAVIVGGTDIMAQKVALAKRPH 134
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRL DHL+ F+L IKFLVLDEADRL
Sbjct: 135 IVVATPGRLDDHLEKTKGFNLRGIKFLVLDEADRL 169
>gi|323333197|gb|EGA74596.1| Dbp8p [Saccharomyces cerevisiae AWRI796]
Length = 431
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS+I GG +V Q +L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG--GLMRAKYLVLDEAD 158
>gi|296824810|ref|XP_002850715.1| ATP-dependent RNA helicase DBP8 [Arthroderma otae CBS 113480]
gi|238838269|gb|EEQ27931.1| ATP-dependent RNA helicase DBP8 [Arthroderma otae CBS 113480]
Length = 527
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L PWL+ + + +K PT IQK IP ++ DCIG ++TGSGKT+AFA PIL
Sbjct: 99 SFASLGLAPWLVSSLKAMEIKRPTAIQKCCIPEIIKGRDCIGGSRTGSGKTVAFAAPILH 158
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA+VLTPTRELA QI +Q + +L+ +ITGG DM Q L+++PH
Sbjct: 159 KWSEDPFGIFAVVLTPTRELALQIFEQIKAISAPQSLKPLLITGGSDMRPQAIGLSQRPH 218
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R++ +VLDEADRL
Sbjct: 219 IVIATPGRLADHIKSSGEDTIVGLKRVRMVVLDEADRL 256
>gi|365983068|ref|XP_003668367.1| hypothetical protein NDAI_0B00900 [Naumovozyma dairenensis CBS 421]
gi|343767134|emb|CCD23124.1| hypothetical protein NDAI_0B00900 [Naumovozyma dairenensis CBS 421]
Length = 436
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 7/161 (4%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F L L+ WL + + PT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 7 ETFKSLGLSKWLYESLSAMKITQPTAIQSACIPEILKGRDCIGGAKTGSGKTIAFAGPML 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
KW EDP G+F +VLTPTRELA QI +QF LG MN+RV+I+ GG +V+Q +L KP
Sbjct: 67 TKWSEDPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVAIVVGGQSIVEQAIQLQNKP 126
Query: 126 HIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
H +IATPGRLA H+ DT L R KFLVLDEAD L
Sbjct: 127 HFIIATPGRLAHHIMNSGEDTVG--GLKRTKFLVLDEADSL 165
>gi|190405946|gb|EDV09213.1| dead box protein [Saccharomyces cerevisiae RM11-1a]
Length = 431
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS+I GG +V Q +L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG--GLMRAKYLVLDEAD 158
>gi|6321963|ref|NP_012039.1| ATP-dependent RNA helicase DBP8 [Saccharomyces cerevisiae S288c]
gi|731740|sp|P38719.1|DBP8_YEAST RecName: Full=ATP-dependent RNA helicase DBP8; AltName: Full=DEAD
box protein 8
gi|160380633|sp|A6ZT77.1|DBP8_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP8; AltName: Full=DEAD
box protein 8
gi|458901|gb|AAB68014.1| Yhr169wp [Saccharomyces cerevisiae]
gi|151944115|gb|EDN62408.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
gi|207344531|gb|EDZ71646.1| YHR169Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273978|gb|EEU08896.1| Dbp8p [Saccharomyces cerevisiae JAY291]
gi|259146927|emb|CAY80183.1| Dbp8p [Saccharomyces cerevisiae EC1118]
gi|285810075|tpg|DAA06862.1| TPA: ATP-dependent RNA helicase DBP8 [Saccharomyces cerevisiae
S288c]
gi|323308784|gb|EGA62022.1| Dbp8p [Saccharomyces cerevisiae FostersO]
gi|323337360|gb|EGA78613.1| Dbp8p [Saccharomyces cerevisiae Vin13]
gi|323348321|gb|EGA82570.1| Dbp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354703|gb|EGA86538.1| Dbp8p [Saccharomyces cerevisiae VL3]
gi|349578721|dbj|GAA23886.1| K7_Dbp8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765263|gb|EHN06775.1| Dbp8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 431
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS+I GG +V Q +L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG--GLMRAKYLVLDEAD 158
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 108/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C ++G KTPT IQ+ IP L +D IG A+TGSGKT AFALPIL
Sbjct: 88 KTFAELGVREELCDACISLGYKTPTAIQRESIPIALQGKDVIGLAETGSGKTAAFALPIL 147
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E F LVL PTRELAYQI QF LG ++N++ ++I GGMDM Q LAKKP
Sbjct: 148 QALLEKQDHYFGLVLAPTRELAYQISQQFEALGSLINVKCAVIVGGMDMTPQQIALAKKP 207
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL ++K+LV+DEADRL
Sbjct: 208 HIIVATPGRLMDHLENTKGFSLRKLKYLVMDEADRL 243
>gi|225718584|gb|ACO15138.1| Probable ATP-dependent RNA helicase DDX47 [Caligus clemensi]
Length = 470
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
EDP SF+DL L L C++ G KTP++IQK IP L D IG A+TGSGKT AFA
Sbjct: 27 EDPC-SFSDLGLTEVLCEACESQGWKTPSKIQKEAIPVALTGRDVIGLAETGSGKTGAFA 85
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP+LQ E P +FAL+LTPTRELAYQI + F LGK + ++ ++ GGMDM+ Q L
Sbjct: 86 LPVLQALLEKPQRLFALILTPTRELAYQISETFEKLGKSIGIKCGVLVGGMDMMSQALVL 145
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI++ATPGRL DH++ F L +K+L++DEADR+
Sbjct: 146 GKKPHIIVATPGRLIDHMENTKGFDLRSLKYLIMDEADRI 185
>gi|392298981|gb|EIW10076.1| Dbp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 431
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS+I GG +V Q +L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG--GLMRAKYLVLDEAD 158
>gi|67527984|ref|XP_661837.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|74681080|sp|Q5B5E7.1|RRP3_EMENI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|40740142|gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|259481158|tpe|CBF74430.1| TPA: ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B5E7] [Aspergillus
nidulans FGSC A4]
Length = 465
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 103/158 (65%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P KSF +L + L C+ +G K PT IQ IP L D IG A+TGSGKT AFALP
Sbjct: 44 PAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALP 103
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+LQ E P +F LVL PTRELAYQI F LG + +R ++I GGMDMV Q L K
Sbjct: 104 MLQALMEAPQTLFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGK 163
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++ATPGRL DHL+ FSL +K+L +DEADRL
Sbjct: 164 KPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRL 201
>gi|297850038|ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
gi|297338742|gb|EFH69159.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 111/162 (68%), Gaps = 6/162 (3%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P+ +F L L W + C+ +G++ PT +Q +P +L D +G A+TGSGKT AFALP
Sbjct: 52 PVANFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALP 111
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
IL + EDPYG+FALV+TPTRELA+Q+ +QF LG +NLR S+I GGMDM+ Q + L
Sbjct: 112 ILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTRSLVS 171
Query: 124 KPHIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRL 161
+PHIVI TPGR L ++ D FS R KFLVLDEADR+
Sbjct: 172 RPHIVITTPGRIKVLLENNPDVPPVFS--RTKFLVLDEADRV 211
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C+ +G K PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 15 EEEPKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P ++ALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 75 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEALGSSIGVKSAVIVGGIDMMSQSLAL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L IK+LV+DEADR+
Sbjct: 135 AKKPHIVIATPGRLIDHLENTKGFNLRAIKYLVMDEADRI 174
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E P KSF DL + L C+ + K PT IQ+ IP L D IG A+TGSGKT AFA
Sbjct: 106 ETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFA 165
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P +F LVL PTRELA QIG F LG ++LR +++ GG+DMV Q L
Sbjct: 166 LPILQSLLEKPQPLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSIAL 225
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHIV+ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 226 GKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRL 265
>gi|402083740|gb|EJT78758.1| ATP-dependent rRNA helicase RRP3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 485
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E P K+F DL + L C+ +G K PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 53 EVPAKTFKDLGIVDPLCEACEALGYKQPTPIQTQAIPLALQGRDVIGIAETGSGKTAAFA 112
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ + P +F LVL PTRELA QIG F LG +++LR +++ GG+DMV Q L
Sbjct: 113 LPILQSLLDKPQPLFGLVLAPTRELAAQIGQAFEALGSLISLRCAVVVGGLDMVSQSIAL 172
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH+V+ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 173 GKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVMDEADRL 212
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL L P L C T+G K PT IQ IP L + D IG A+TGSGKT AFALPIL
Sbjct: 52 KTFKDLGLIPQLCEACDTLGYKAPTAIQTEAIPLALQNRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVL PTRELAYQI + F LG +++R ++ GGMDMV Q + K+P
Sbjct: 112 QALMDKPQPFFGLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAIAIGKRP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 207
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 115/161 (71%), Gaps = 6/161 (3%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
++ +L + WL+ C+ +G++ PT +Q+A +P +L +D +G A+TGSGKT AFALPI
Sbjct: 1 MEEIKELGVAEWLVGACKELGMRHPTPVQRACVPQILKGKDVLGMAQTGSGKTAAFALPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ+ E+PYGIFALV+TPTRELA+QI DQF LG ++LR +++ GGMDM Q + L ++
Sbjct: 61 LQRLGENPYGIFALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQILTER 120
Query: 125 PHIVIATPGRLADHL----DTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGR+ HL D FS + KFLVLDEAD L
Sbjct: 121 PHVVIATPGRIKAHLGSDPDIAAAFS--KTKFLVLDEADLL 159
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SFT+LKL P L+ Q++ PT IQ IPH L +D IG A TGSGKT AFA+PIL
Sbjct: 65 ESFTELKLIPELLEAIQSMKFTKPTPIQAEAIPHALEGKDVIGLAVTGSGKTAAFAIPIL 124
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q D + LVL+PTRELAYQI D F LG M LR I GGMDM+DQ ++L +KP
Sbjct: 125 QSLWHDQLPYYCLVLSPTRELAYQIKDTFDALGSGMGLRACCIVGGMDMMDQARDLMRKP 184
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 185 HVIVATPGRIVDHLEHTKGFSLKNLKYLVMDEADRL 220
>gi|449547391|gb|EMD38359.1| hypothetical protein CERSUDRAFT_49063 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 104/154 (67%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L L+ + TPTEIQ ++PH L D IG A TGSGKT AFALPILQK
Sbjct: 15 FRSLGLIEPLLEAVDQLHYTTPTEIQAEVLPHALQGRDIIGVAATGSGKTAAFALPILQK 74
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P G+FA V+ PTRELAYQI QF LG + +R + I GGM ++DQ LAK+PHI
Sbjct: 75 LWEEPKGLFACVMAPTRELAYQISQQFESLGSAIGVRCATIVGGMPIMDQAVALAKRPHI 134
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 135 VVATPGRLNDHLENTKGFSLRGLKFLVMDEADRL 168
>gi|50302587|ref|XP_451229.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690512|sp|Q6CXW0.1|DBP8_KLULA RecName: Full=ATP-dependent RNA helicase DBP8
gi|49640360|emb|CAH02817.1| KLLA0A05203p [Kluyveromyces lactis]
Length = 435
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L + WL+ + + PT IQKA IP +L DCIG A TGSGKT+AFA P+L K
Sbjct: 6 FKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPMLTK 65
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF G MN+RV+I+ GG +V Q EL K+PH
Sbjct: 66 WSEDPQGMFGIVLTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESIVQQAIELQKRPHF 125
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R+KFLVLDEAD
Sbjct: 126 IIATPGRLAHHVLNSGEDTIG--GLKRVKFLVLDEAD 160
>gi|302508367|ref|XP_003016144.1| ATP-dependent RNA helicase, putative [Arthroderma benhamiae CBS
112371]
gi|291179713|gb|EFE35499.1| ATP-dependent RNA helicase, putative [Arthroderma benhamiae CBS
112371]
Length = 528
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L PWL+ + + +K PT IQK+ IP ++ DCIG ++TGSGKT+AFA PIL
Sbjct: 100 SFSSLGLAPWLVSSLKAMEIKRPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAGPILH 159
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GI+A++LTPTRELA QI +Q + +L+ +ITGG DM Q L+++PH
Sbjct: 160 KWSEDPFGIYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIGLSQRPH 219
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R++ +VLDEADRL
Sbjct: 220 IVIATPGRLADHIKSSGEDTIIGLKRVRMVVLDEADRL 257
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C ++ K PT IQ+ IP L +D IG A+TGSGKT AFALPIL
Sbjct: 74 KTFADLGVREELCDACDSLNFKRPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPIL 133
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F L+L PTRELAYQI QF LG ++++R ++I GGMDMV Q LAKKP
Sbjct: 134 QALLDKPQPLFGLILAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVPQAVALAKKP 193
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DH++ FS+ K+LV+DEADRL
Sbjct: 194 HIVVATPGRLLDHMENTKGFSVKHFKYLVMDEADRL 229
>gi|403164869|ref|XP_003324940.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165434|gb|EFP80521.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 518
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 108/160 (67%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F +L L P L C+T+ K PT IQ IP+ L D D IG A+TGSGKT AFA
Sbjct: 68 EEVSKTFEELGLIPELCEACRTLNYKRPTPIQAESIPYALEDRDIIGLAQTGSGKTAAFA 127
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP+LQ DP F VL PTRELAYQI QF LG + ++ ++I GG+DM+ Q L
Sbjct: 128 LPVLQSLWNDPKPFFCCVLAPTRELAYQISQQFDALGSTIGVKTAVIVGGIDMMSQAIAL 187
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PHI++ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 188 SKRPHIIVATPGRLHDHLENTKGFSLRNLKYLIMDEADRL 227
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 113/160 (70%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
+D + +F DL + L + C+++ K PT+IQK IP L D IG A+TGSGKT AFA
Sbjct: 18 DDKVVTFKDLGIVDVLCQTCESLKWKAPTKIQKEAIPLTLQGRDVIGLAETGSGKTGAFA 77
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ ++P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q L
Sbjct: 78 LPILQALLQNPQRYFALILTPTRELAFQISEQFQALGSKIGVKTAVIVGGMDMMSQALLL 137
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH++IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 138 AKKPHVIIATPGRLVDHLENTKGFNLKALKFLVMDEADRI 177
>gi|443917623|gb|ELU38297.1| ATP-dependent rRNA helicase RRP3 [Rhizoctonia solani AG-1 IA]
Length = 1028
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 87/155 (56%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L+ + +G PTEIQ IIPH L +D IG A+TGSGKT AFALPILQ
Sbjct: 97 TFDSLGLISPLLEALKQVGYSKPTEIQAGIIPHALEGKDVIGVAETGSGKTAAFALPILQ 156
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K ++P G+FA VL PTRELAYQI QF LG + +R + I GGMDM+ Q L KPH
Sbjct: 157 KLWDEPRGLFACVLAPTRELAYQIAQQFEALGSAIGVRCATIVGGMDMMSQSIALG-KPH 215
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL DHL+ FSL +++LVLDEADRL
Sbjct: 216 IIVATPGRLNDHLENTKGFSLRGLRYLVLDEADRL 250
>gi|58258171|ref|XP_566498.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338818061|sp|P0CR02.1|DBP8_CRYNJ RecName: Full=ATP-dependent RNA helicase DBP8
gi|57222635|gb|AAW40679.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 619
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 87/170 (51%), Positives = 118/170 (69%), Gaps = 5/170 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ LI +I +K PTEIQ A + +L+ DCIG AKTGSGKT+AFALPI++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DP+G++A+VLTPTRELAYQ+ +QFLV+GK + L + I GGMDM+ Q +EL +PH
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 127 IVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
I++ATPGRL D L + L+R++ LVLDEADR+ S L + F
Sbjct: 273 IIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLF 322
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E +K+F +L + L C+++G TPT IQ IP L D IG A+TGSGKT AFA
Sbjct: 46 EVQVKTFKELGIVDALCESCESVGYTTPTSIQAKSIPVALQGRDVIGLAETGSGKTAAFA 105
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP+LQ E P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q L
Sbjct: 106 LPMLQALLEKPQPLFGLVLAPTRELAAQIGQTFEALGALISLRCAVIVGGLDMVPQAIAL 165
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH+++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 166 GKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRL 205
>gi|392577497|gb|EIW70626.1| hypothetical protein TREMEDRAFT_71341 [Tremella mesenterica DSM
1558]
Length = 611
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/165 (55%), Positives = 116/165 (70%), Gaps = 6/165 (3%)
Query: 3 DPIK----SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTL 58
DP+ SF L L+ LI TI ++ PTEIQ A I +L D IG AKTGSGKTL
Sbjct: 140 DPVTTTRTSFESLGLSKPLIAALATINIRHPTEIQSACIGPMLAGRDVIGGAKTGSGKTL 199
Query: 59 AFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
AFALPI+++ DP+G++A++LTPTRELAYQ+ +QFLV+GK + L + GGMDM+ Q
Sbjct: 200 AFALPIVERIARDPFGVWAVILTPTRELAYQLSEQFLVVGKPLGLNTITVVGGMDMLQQA 259
Query: 119 KELAKKPHIVIATPGRLADHL--DTCNTFSLNRIKFLVLDEADRL 161
KEL +PH+V+ATPGRL D L D +T L+R+K LVLDEADRL
Sbjct: 260 KELEARPHVVVATPGRLCDLLRSDGMSTGKLSRVKTLVLDEADRL 304
>gi|134106277|ref|XP_778149.1| hypothetical protein CNBA1490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818060|sp|P0CR03.1|DBP8_CRYNB RecName: Full=ATP-dependent RNA helicase DBP8
gi|50260852|gb|EAL23502.1| hypothetical protein CNBA1490 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 619
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 87/170 (51%), Positives = 118/170 (69%), Gaps = 5/170 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ LI +I +K PTEIQ A + +L+ DCIG AKTGSGKT+AFALPI++
Sbjct: 153 TFESLGLSRPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DP+G++A+VLTPTRELAYQ+ +QFLV+GK + L + I GGMDM+ Q +EL +PH
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 127 IVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
I++ATPGRL D L + L+R++ LVLDEADR+ S L + F
Sbjct: 273 IIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLF 322
>gi|358399923|gb|EHK49260.1| hypothetical protein TRIATDRAFT_143973 [Trichoderma atroviride IMI
206040]
Length = 479
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+P K+F +L + L C+++ KTPT IQ IP L D IG A+TGSGKT AFA
Sbjct: 52 EEP-KTFKELGIVDSLCEACESLNYKTPTSIQARSIPVALQGRDVIGLAETGSGKTAAFA 110
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q L
Sbjct: 111 LPILQALLEKPQPFFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDMVPQAIAL 170
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 171 GKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRL 210
>gi|302886563|ref|XP_003042171.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723080|gb|EEU36458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 490
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 107/158 (67%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P K+F DL +N L C+ + K PT IQ+ IP L D IG A+TGSGKT AFALP
Sbjct: 63 PKKTFKDLGVNDALCEACEALNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAFALP 122
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+LQ + P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q L K
Sbjct: 123 VLQALLDKPQPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAIALGK 182
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 183 KPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRL 220
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F L+L PTRELAYQI F LG + +R +I GGMDMV Q L KKP
Sbjct: 112 QALMEKPQPFFGLILAPTRELAYQISKSFESLGASLGVRSCVIVGGMDMVSQSISLGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 207
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 114/163 (69%), Gaps = 3/163 (1%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
+D + SF +L L W++ C+ + + PT Q A IP LN +D IG ++TG+GKT++F
Sbjct: 9 KDMVSSFEELGLGQWIVETCKALNIMKPTPCQVACIPQTLNGKDIIGSSETGTGKTMSFV 68
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPI+ K DP G+FA+VLTPTRELA+QI DQF +G M++RV+++ GG++ + Q EL
Sbjct: 69 LPIVDKLSVDPCGVFAIVLTPTRELAFQIYDQFKAIGNPMSIRVAVVVGGLESIRQATEL 128
Query: 122 AKKPHIVIATPGRLADHL---DTCNTFSLNRIKFLVLDEADRL 161
+PH+V+ATPGRLAD D+ F L+ I+FLVLDEADRL
Sbjct: 129 ENRPHVVVATPGRLADLFTIEDSVERFHLHSIRFLVLDEADRL 171
>gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
gi|91207782|sp|Q4IFI0.1|RRP3_GIBZE RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 486
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 109/161 (67%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
++ P K+F DL +N L C+ + K PT IQ+ IP L D IG A+TGSGKT AF
Sbjct: 55 VDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAF 114
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALP+LQ + P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q
Sbjct: 115 ALPVLQALLDKPQPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAIA 174
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L KKPHIV+ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 175 LGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRL 215
>gi|241959442|ref|XP_002422440.1| ATP-dependent rRNA helicase, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223645785|emb|CAX40447.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 499
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L P L+ +++ PT IQ IPH L +D IG A+TGSGKT AFA+PIL
Sbjct: 86 KTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 145
Query: 66 QK-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
Q W + PY FALVL PTRELA+QI D F LG M LR S I GGMDM+DQ ++L +
Sbjct: 146 QSLWHAQQPY--FALVLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMR 203
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 204 KPHIIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 241
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +LKL P L+ Q + PT IQ IPH L +D IG A+TGSGKT AFA+PIL
Sbjct: 65 KSFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 124
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E + LVL PTRELAYQI + F LG M LR I GGMDM+DQ ++L +KP
Sbjct: 125 QALWEAQAAYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKP 184
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 185 HILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 220
>gi|340372039|ref|XP_003384552.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Amphimedon queenslandica]
Length = 451
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 111/155 (71%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+D+ + L + C+ +G TPT+IQ+ IP L D IG A+TGSGKT AF+LPILQ
Sbjct: 27 TFSDIGITSVLCQSCEEMGWTTPTDIQREAIPVALEGRDVIGLAETGSGKTGAFSLPILQ 86
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ P +FALVLTPTRELA+QI +QF LG + ++ +++ GG+DM+ Q LAKKPH
Sbjct: 87 SLLDTPTRLFALVLTPTRELAFQISEQFEALGGRIGVKCAVVVGGVDMMTQALALAKKPH 146
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRL DHL+ FSL +K+LV+DEADR+
Sbjct: 147 VVIATPGRLVDHLENTKGFSLRSVKYLVMDEADRI 181
>gi|403222338|dbj|BAM40470.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 470
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 110/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL ++P L R C+ +G K PT+IQ IP L +D IG A+TGSGKT AF +PILQ
Sbjct: 56 TFEDLGVSPELCRACKQLGWKRPTKIQVEAIPVALQGKDIIGLAETGSGKTAAFTIPILQ 115
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E P +F+L+LTPTREL+ QI +Q L LG + L V +I GG+DMV Q +L+KKPH
Sbjct: 116 KLLEKPQRLFSLILTPTRELSLQIKEQLLSLGSEIGLDVCLILGGLDMVTQALQLSKKPH 175
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ +PGR+ADHL FSL IKFLVLDEADR+
Sbjct: 176 IIVGSPGRVADHLQNTKGFSLETIKFLVLDEADRI 210
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+K+F DL + L C+ +G K PT IQ+ IP L + D IG A+TGSGKT AFALPI
Sbjct: 64 VKTFRDLGIVDSLCDACERLGYKNPTPIQQEAIPLALQNRDIIGIAETGSGKTAAFALPI 123
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + P +FALVL PTRELA QI F LG +++LR ++I GG+DMV Q L KK
Sbjct: 124 LQALLDKPQPLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGLDMVQQAIALGKK 183
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+V+ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 184 PHVVVATPGRLLDHLEKTKGFSLRNLKFLVMDEADRL 220
>gi|320582192|gb|EFW96410.1| ATP-dependent RNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 428
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 105/161 (65%), Gaps = 6/161 (3%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L L WL+ Q + + PT IQ A IP +L DCIG AKTGSGKT+AF P+
Sbjct: 1 MSDFASLGLPRWLVESLQAMKITRPTNIQAACIPEILKGRDCIGGAKTGSGKTIAFGAPM 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L KW +DP GIF LVLTPTRELA QI DQF LG +NL+V +I GG M DQ + +
Sbjct: 61 LAKWSQDPSGIFGLVLTPTRELAMQIADQFAALGATVNLKVRLIIGGESMTDQVAMIKEN 120
Query: 125 PHIVIATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
PH +IATPGRLA ++ D C L R+K+LVLDEADRL
Sbjct: 121 PHFIIATPGRLAHIIMENEDECR--GLKRVKYLVLDEADRL 159
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L L L C ++G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVL PTRELAYQI F LG +++R +++ GGMDMV Q L KKP
Sbjct: 112 QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 207
>gi|409080848|gb|EKM81208.1| hypothetical protein AGABI1DRAFT_119719 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 398
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 113/168 (67%), Gaps = 1/168 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF+DL L LI+ + + +TPT+IQ IP L+ D IG A TGSGKT+AFALPIL
Sbjct: 7 KSFSDLGLCTPLIKALEDLKYETPTQIQAECIPPALSGRDIIGIAPTGSGKTIAFALPIL 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGG-MDMVDQGKELAKK 124
+ ++P FALVL+PTRELAYQI QF LG M +R +I GG D V Q LAKK
Sbjct: 67 HRLWDNPQSNFALVLSPTRELAYQISAQFEALGAAMGVRSVVIVGGEEDRVQQAVRLAKK 126
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLKFFFF 172
PHI++ATPGRL DHL++ FSL ++K LVLDEADRL++ + F
Sbjct: 127 PHIIVATPGRLHDHLNSTKGFSLRQLKHLVLDEADRLAIPRERSTYLF 174
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L L L C ++G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVL PTRELAYQI F LG +++R +++ GGMDMV Q L KKP
Sbjct: 112 QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 207
>gi|19114747|ref|NP_593835.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654514|sp|Q9P6N8.1|RRP3_SCHPO RecName: Full=ATP-dependent rRNA helicase rrp3
gi|7708606|emb|CAB90153.1| ATP-dependent RNA helicase Rrp3 (predicted) [Schizosaccharomyces
pombe]
Length = 465
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+ +G KTPT IQ+ IP VLN D IG A+TGSGKT AFALP++
Sbjct: 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ +P FA+VL PTRELAYQI +QF +G + +R +I GGMDMV Q L+KKP
Sbjct: 106 QELWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKP 165
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ TPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 166 HVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRL 201
>gi|367050892|ref|XP_003655825.1| hypothetical protein THITE_2119963 [Thielavia terrestris NRRL 8126]
gi|347003089|gb|AEO69489.1| hypothetical protein THITE_2119963 [Thielavia terrestris NRRL 8126]
Length = 577
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 82/162 (50%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + +K PT IQ+ IP +L DCIG ++TGSGKT+AF++
Sbjct: 143 DANTTFESLGVRPWLVQSLANMAIKRPTAIQRESIPMLLKGRDCIGGSRTGSGKTVAFSV 202
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW E+P IF ++LTPTRELA QI +Q + +L+ ++TGG DM Q LA
Sbjct: 203 PILQKWAENPSAIFGVILTPTRELALQIYEQIKAISSPHSLKAILVTGGSDMRSQAIALA 262
Query: 123 KKPHIVIATPGRLADHLDTC---NTFSLNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ T L R++F+VLDEADRL
Sbjct: 263 QRPHIVIATPGRLADHIRTSGEDTVCGLRRVRFVVLDEADRL 304
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 109/161 (67%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
++ P K+F DL +N L C+ + K PT IQ+ IP L D IG A+TGSGKT AF
Sbjct: 55 VDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQEQSIPVALQGRDIIGLAETGSGKTAAF 114
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALP+LQ + P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q
Sbjct: 115 ALPVLQALLDKPQPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQSIA 174
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L KKPHI++ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 175 LGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRL 215
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+P K+F +L + L C+++ K PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 55 EEP-KTFKELGIVDSLCEACESLNYKRPTAIQAKAIPVALQGRDVIGLAETGSGKTAAFA 113
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q L
Sbjct: 114 LPILQALLEKPQPLFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDMVPQAIAL 173
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 174 GKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRL 213
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 103/154 (66%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L L+ + + K PT+IQ +PH L D IG A TGSGKT AFALPILQK
Sbjct: 539 FRSLGLIDPLLEALEQLNFKHPTDIQVEALPHALQGRDIIGVASTGSGKTAAFALPILQK 598
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P G+FA VL PTRELAYQI QF LG M +R I GG+DM+ Q LAK+PHI
Sbjct: 599 LWEEPKGLFACVLAPTRELAYQISQQFEGLGSAMGVRCVTIVGGLDMMAQSVALAKRPHI 658
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGRL DHL+ FSL +KFLVLDEADRL
Sbjct: 659 VVATPGRLIDHLENTKGFSLRGLKFLVLDEADRL 692
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+P K+F +L + L C+++ K PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 53 EEP-KTFKELGIVDSLCEACESLNYKHPTSIQAKSIPVALQGRDVIGLAETGSGKTAAFA 111
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q L
Sbjct: 112 LPILQALLEKPQPLFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDMVPQAIAL 171
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 GKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRL 211
>gi|444318027|ref|XP_004179671.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
gi|387512712|emb|CCH60152.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
Length = 506
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 109/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++LKL P L+ C+ + + PT IQ IP L +D IG A+TGSGKT AFA+PIL
Sbjct: 87 SFSELKLVPELVEACKNLNYEKPTPIQSRAIPPALEGKDIIGLAQTGSGKTAAFAIPILN 146
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K ED +A ++ PTRELA QI +QF LG +M +R I GGM+M+DQ ++L +KPH
Sbjct: 147 KLWEDQQPYYACIMAPTRELAQQIKEQFDSLGALMGVRSVCIVGGMNMMDQARDLMRKPH 206
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 207 IIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRL 241
>gi|405117528|gb|AFR92303.1| ATP-dependent RNA helicase DBP8 [Cryptococcus neoformans var.
grubii H99]
Length = 619
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 83/157 (52%), Positives = 114/157 (72%), Gaps = 2/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ L+ +I +K PTEIQ A + +L+ DCIG AKTGSGKT+AFALPI++
Sbjct: 153 TFESLGLSRPLVTALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DP+G++A+VLTPTRELAYQ+ +QFLV+GK + L + I GGMDM+ Q +EL +PH
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 127 IVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL 161
I++ATPGRL D L + L+R++ LVLDEADR+
Sbjct: 273 IIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRM 309
>gi|401840618|gb|EJT43365.1| DBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 437
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 10 FKSLGLSKWLTESLKAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 69
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS++ GG ++ Q L +KPH
Sbjct: 70 WSEDPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVVVGGESIIQQALALQRKPHF 129
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 130 IIATPGRLAHHIMSSGEDTVR--GLMRAKYLVLDEAD 164
>gi|356555223|ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 591
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 117/173 (67%), Gaps = 9/173 (5%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F DL L W ++ C+ +G++ P +Q+ IP VL +G +TGSGKT AFALPIL
Sbjct: 69 ETFGDLGLAEWAVKTCRELGMRRPRGVQRRCIPRVLEGRHVLGVDETGSGKTAAFALPIL 128
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ E P+G+FALV+TPTRELA+Q+ +QF LG ++LR++++ GGMDM+ Q KELA +P
Sbjct: 129 HRLAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQAKELAARP 188
Query: 126 HIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADR---LSLMTSLKFFF 171
H+VIATPGR L ++ D FS R KFLVLDEADR + L+F F
Sbjct: 189 HLVIATPGRIHALLRNNPDIPPVFS--RTKFLVLDEADRVLDVGFQEELRFIF 239
>gi|301610484|ref|XP_002934776.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 399
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F +L + L C+ +G K PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 15 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P ++ALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 75 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLAL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 135 AKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 174
>gi|315055381|ref|XP_003177065.1| ATP-dependent RNA helicase DBP8 [Arthroderma gypseum CBS 118893]
gi|311338911|gb|EFQ98113.1| ATP-dependent RNA helicase DBP8 [Arthroderma gypseum CBS 118893]
Length = 528
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L PWL+ + + +K PT IQK+ IP ++ DCIG ++TGSGKT+AFA PIL
Sbjct: 100 SFASLGLAPWLVSSLKAMEIKRPTAIQKSCIPEIIKGRDCIGGSRTGSGKTVAFAAPILH 159
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW DP+GI+A++LTPTRELA QI +Q + +L+ +ITGG DM Q L+++PH
Sbjct: 160 KWSADPFGIYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIGLSQRPH 219
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R++ +VLDEADRL
Sbjct: 220 IVIATPGRLADHIKSSGEDTIIGLKRVRMVVLDEADRL 257
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E KSF DL + L C+ +G K+PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 55 EAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFA 114
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ P +F L+L PTRELA QI + F LG ++++R ++I GGMDMV Q L
Sbjct: 115 LPILQALMNKPQSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISL 174
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 175 GKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 214
>gi|301610486|ref|XP_002934777.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Xenopus (Silurana) tropicalis]
Length = 402
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F +L + L C+ +G K PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 15 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P ++ALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 75 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLAL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 135 AKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 174
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 109/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + L C+T+ KTPT+IQK IP L +D IG A+TGSGKT AFA+PILQ
Sbjct: 20 TFKDLGVTDVLCETCETLKWKTPTKIQKEAIPVALQGKDIIGLAETGSGKTGAFAIPILQ 79
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +Q LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 80 ALLENPQRYFALILTPTRELAFQISEQIEALGSSIGVKCAVIVGGMDMMAQSLMLAKKPH 139
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ FSL +K LV+DEADR+
Sbjct: 140 IIIATPGRLVDHLENTKGFSLRNLKVLVMDEADRI 174
>gi|38566158|gb|AAH62498.1| ddx47-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 401
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F +L + L C+ +G K PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 14 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 73
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P ++ALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 74 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLAL 133
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 134 AKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 173
>gi|365760297|gb|EHN02027.1| Dbp8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 437
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 10 FKSLGLSKWLTESLKAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 69
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS++ GG ++ Q L +KPH
Sbjct: 70 WSEDPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVVVGGESIIQQALALQRKPHF 129
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 130 IIATPGRLAHHIMSSGEDTVG--GLMRAKYLVLDEAD 164
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E KSF DL + L C+ +G K+PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 55 EAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFA 114
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ P +F L+L PTRELA QI + F LG ++++R ++I GGMDMV Q L
Sbjct: 115 LPILQALMNKPQSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISL 174
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 175 GKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 214
>gi|452846401|gb|EME48333.1| hypothetical protein DOTSEDRAFT_76016 [Dothistroma septosporum
NZE10]
Length = 493
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + WL+ + +K PT IQKA IP +L DCIG ++TGSGKT+AF +PILQ
Sbjct: 53 TFPDLGTDKWLVSALSHMSIKWPTRIQKATIPQILAGRDCIGGSRTGSGKTIAFGVPILQ 112
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W P GIFAL++TPTRELA QI +QF +G ++ ++TGG DM Q L+++PH
Sbjct: 113 QWARQPSGIFALIMTPTRELALQIYEQFQAIGGSQGVKCVLVTGGADMRQQAISLSQRPH 172
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLADH++ + L ++K++VLDEADRL
Sbjct: 173 VVIATPGRLADHIENSGEDTIQGLKKVKYVVLDEADRL 210
>gi|410076594|ref|XP_003955879.1| hypothetical protein KAFR_0B04480 [Kazachstania africana CBS 2517]
gi|372462462|emb|CCF56744.1| hypothetical protein KAFR_0B04480 [Kazachstania africana CBS 2517]
Length = 435
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 107/160 (66%), Gaps = 7/160 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I SF L L+ WL+ + + + PT IQ IP +L DCIG AKTGSGKT+ FA P+
Sbjct: 4 ITSFKQLGLSKWLLDSLRAMKITQPTTIQSHCIPEILKGRDCIGGAKTGSGKTITFAAPM 63
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L +W EDP G+F +VLTPTRELA QI +QF LG MN+RV++I GG +V+Q EL +K
Sbjct: 64 LARWSEDPCGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVALIVGGESIVNQAIELQRK 123
Query: 125 PHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
PH +IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 124 PHFIIATPGRLAHHILNSGEDTVG--GLKRAKYLVLDEAD 161
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 108/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ +K+F L + L+ C ++G K P++IQ IPH L +D IG A+TGSGKT AFAL
Sbjct: 6 EEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFAL 65
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ E P FA VL+PTRELA QI +QF LG + ++ +++ GG+DMV Q LA
Sbjct: 66 PILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINLA 125
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PH+V+ TPGRL DHL FSL +K+LVLDEADRL
Sbjct: 126 KRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRL 164
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F +L + L C+ +G K PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 15 EEEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P ++ALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 75 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLAL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 135 AKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 174
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+ +G K+PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 59 KSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 118
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q P +F L+L PTRELA QI + F LG ++++R ++I GGMDMV Q L KKP
Sbjct: 119 QALMNKPQSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKP 178
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 179 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 214
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
Query: 3 DPIKSFTDLKLNPW-------LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSG 55
+P K+F +L P L C+T+G KTPT IQ IP L D IG A+TGSG
Sbjct: 48 EPPKTFKELANTPHHQGIVDALCEACETLGYKTPTGIQAQSIPVALQGRDVIGLAETGSG 107
Query: 56 KTLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMV 115
KT AFALP+LQ + P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV
Sbjct: 108 KTAAFALPVLQALLDKPQPLFGLVLAPTRELAAQIGQTFEALGALISLRCAVIVGGLDMV 167
Query: 116 DQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
Q L KKPH+++ATPGRL DHL+ FSL +K+LVLDEADRL
Sbjct: 168 PQAVALGKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLVLDEADRL 213
>gi|242222657|ref|XP_002477039.1| predicted protein [Postia placenta Mad-698-R]
gi|220723636|gb|EED77767.1| predicted protein [Postia placenta Mad-698-R]
Length = 389
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 104/160 (65%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
+ P +F L L L+ + + K PTEIQ +PH L D IG A TGSGKT AFA
Sbjct: 15 QAPAPTFKSLGLIDPLLEALEQLNFKIPTEIQVQALPHALQGRDIIGVASTGSGKTAAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQK E+P G+FA ++ PTRELAYQI Q LG M +R + GGMD + Q L
Sbjct: 75 LPILQKLWEEPKGLFACIMAPTRELAYQISQQIEALGSAMGVRCVTLVGGMDKMAQAVAL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AK+PHIV+ATPGRL DHL+ FSL +KFLVLDEADRL
Sbjct: 135 AKRPHIVVATPGRLNDHLEDTKGFSLRGLKFLVLDEADRL 174
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF + L L+ + +G KTPT+IQ +PH L D IG A TGSGKT AFALPI+Q
Sbjct: 16 SFKSIGLIDPLLEAVEQLGYKTPTDIQAEALPHALEGRDIIGVASTGSGKTAAFALPIIQ 75
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
DP G+FA V+ PTRELAYQI QF LG + +R ++I GGMD+V Q LAKKPH
Sbjct: 76 ALWNDPKGLFACVIAPTRELAYQISQQFEALGSGIGVRCAVIIGGMDVVSQSIALAKKPH 135
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL HL+ FSL +KF VLDEADRL
Sbjct: 136 IIVATPGRLNYHLENTKGFSLRGLKFFVLDEADRL 170
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 109/159 (68%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L ++P +I C +G K PTEIQ+ IPH + D IG A+TGSGKT AFA+
Sbjct: 79 DENTTFDQLGMHPQIIEACVRMGFKKPTEIQRESIPHAIAGRDIIGLAQTGSGKTAAFAI 138
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+ + P +FAL+L+PTRELA+QI QF LG V+ ++ ++ GGMD++ Q LA
Sbjct: 139 PILQQLLQSPQPLFALILSPTRELAFQISQQFEALGAVIGVKCGVLVGGMDVMQQAMVLA 198
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI++ TPGR+ HL+ F L +KFLV+DEADRL
Sbjct: 199 RKPHIIVGTPGRVMYHLENTKGFHLKALKFLVMDEADRL 237
>gi|327307374|ref|XP_003238378.1| ATP-dependent RNA helicase DBP8 [Trichophyton rubrum CBS 118892]
gi|326458634|gb|EGD84087.1| ATP-dependent RNA helicase DBP8 [Trichophyton rubrum CBS 118892]
Length = 528
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L WL+ + + +K PT IQK+ IP ++ DCIG ++TGSGKT+AFA PIL
Sbjct: 100 SFSSLGLASWLVSSLKAMEIKRPTAIQKSCIPEIMKGRDCIGGSRTGSGKTVAFAAPILH 159
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+G++A++LTPTRELA QI +Q + +L+ +ITGG DM Q L+++PH
Sbjct: 160 KWSEDPFGVYAVILTPTRELALQIFEQVKAISAPQSLKPLLITGGSDMRPQAIGLSQRPH 219
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
IVIATPGRLADH+ + L R++ +VLDEADRL
Sbjct: 220 IVIATPGRLADHIKSSGEDTIIGLKRVRMVVLDEADRL 257
>gi|147808007|emb|CAN66431.1| hypothetical protein VITISV_041393 [Vitis vinifera]
Length = 199
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL + L+ C+ +G KTP++IQ IPH L +D IG A+TGSGKT AFALPI
Sbjct: 8 VKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 67
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + P +FA VL+PTRELA QI +QF LG + L+ +++ GG+D Q LAK+
Sbjct: 68 LQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKR 127
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ TPGRL DHL FSL +K+LVLDEADRL
Sbjct: 128 PHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRL 164
>gi|321251103|ref|XP_003191959.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317458427|gb|ADV20172.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 619
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 84/157 (53%), Positives = 113/157 (71%), Gaps = 2/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ LI +I + PTEIQ A I +L+ DCIG AKTGSGKT+AFALPI++
Sbjct: 153 TFESLGLSRPLITALASININKPTEIQAACIEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DP+G++A+VLTPTRELAYQ+ +QFLV+GK + L + I GGMDM+ Q +EL +PH
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 127 IVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL 161
I++ATPGRL D L + L+R++ LVLDEADR+
Sbjct: 273 IIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRM 309
>gi|148232160|ref|NP_001084651.1| uncharacterized protein LOC414610 [Xenopus laevis]
gi|46249606|gb|AAH68844.1| MGC81500 protein [Xenopus laevis]
Length = 317
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C+ +G K PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 15 EEEQKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P ++ALVLTPTRELA+QI +QF +G + ++ ++I GG+DM+ Q L
Sbjct: 75 LPILQTLLESPQRLYALVLTPTRELAFQISEQFEAIGSSIGVKSAVIVGGIDMMSQSLAL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 135 AKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 174
>gi|225468923|ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
vinifera]
Length = 470
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL + L+ C+ +G KTP++IQ IPH L +D IG A+TGSGKT AFALPI
Sbjct: 42 VKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 101
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + P +FA VL+PTRELA QI +QF LG + L+ +++ GG+D Q LAK+
Sbjct: 102 LQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKR 161
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ TPGRL DHL FSL +K+LVLDEADRL
Sbjct: 162 PHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRL 198
>gi|297736067|emb|CBI24105.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL + L+ C+ +G KTP++IQ IPH L +D IG A+TGSGKT AFALPI
Sbjct: 8 VKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 67
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + P +FA VL+PTRELA QI +QF LG + L+ +++ GG+D Q LAK+
Sbjct: 68 LQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKR 127
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ TPGRL DHL FSL +K+LVLDEADRL
Sbjct: 128 PHIVVGTPGRLMDHLSNTKGFSLRTMKYLVLDEADRL 164
>gi|363752960|ref|XP_003646696.1| hypothetical protein Ecym_5095 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890332|gb|AET39879.1| hypothetical protein Ecym_5095 [Eremothecium cymbalariae
DBVPG#7215]
Length = 438
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL+ ++ + PT +QKA IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 5 FKSLGLSKWLVEALHSMKITQPTIVQKACIPEILKGCDCIGGAKTGSGKTIAFAAPMLSN 64
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W DP G+F +VLTPTRELA QI +QF LG +MN++V+++ GG D+V Q EL ++PH
Sbjct: 65 WSADPSGMFGVVLTPTRELAMQIAEQFTALGSIMNIKVALVVGGDDIVKQALELQRRPHF 124
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R+K+LVLDEAD
Sbjct: 125 IIATPGRLAHHIMHSGEDTIG--GLRRVKYLVLDEAD 159
>gi|327272752|ref|XP_003221148.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Anolis carolinensis]
Length = 399
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 109/159 (68%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ KSF +L + L C +G KTPT+IQ IP L D IG A+TGSGKT AFAL
Sbjct: 13 EAAKSFKELGVTEVLCEACDQLGWKTPTKIQVESIPLALQGRDIIGLAETGSGKTGAFAL 72
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ E P FALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LA
Sbjct: 73 PILQALLETPQRFFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDMMAQSLALA 132
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 133 KKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 171
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ +G K PT IQ+ IP L + D IG A+TGSGKT AFALPIL
Sbjct: 70 KTFADLGIVESLCEACERLGYKRPTPIQEQAIPLALQNRDLIGIAETGSGKTAAFALPIL 129
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +FALVL PTRELA QI F LG +++LR ++I GG+DMV Q L KKP
Sbjct: 130 QALLDKPQPLFALVLAPTRELAAQIAQAFEALGSMISLRCALILGGLDMVQQAIALGKKP 189
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 190 HVIVATPGRLLDHLEKTKGFSLRNLKYLVMDEADRL 225
>gi|409045997|gb|EKM55477.1| hypothetical protein PHACADRAFT_184272 [Phanerochaete carnosa
HHB-10118-sp]
Length = 472
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L L+ Q + +PT+IQ A +PH L D IG A TGSGKT AFALPILQ
Sbjct: 22 SFKALGLIDPLLEALQQLSFTSPTDIQTAALPHALEGRDIIGVASTGSGKTAAFALPILQ 81
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K +DP G+FA V+ PTRELAYQI + F LG M +R + + GG+D + Q LAKKPH
Sbjct: 82 KLWDDPRGLFACVIAPTRELAYQITEHFEALGSAMGVRCATVVGGIDEMSQAVALAKKPH 141
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRL HL+ FSL +KFLVLDEADRL
Sbjct: 142 VVVATPGRLQYHLENTKGFSLRSLKFLVLDEADRL 176
>gi|156844185|ref|XP_001645156.1| hypothetical protein Kpol_1062p5 [Vanderwaltozyma polyspora DSM
70294]
gi|160380632|sp|A7TK63.1|DBP8_VANPO RecName: Full=ATP-dependent RNA helicase DBP8
gi|156115814|gb|EDO17298.1| hypothetical protein Kpol_1062p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 431
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 3/158 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
++ F L L+ WL+ + + PT IQK IP +L DCIG AKTGSGKT+AFA P+
Sbjct: 1 MQDFKSLGLSRWLVESLNAMRITHPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAFAGPM 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L +W +DP G+F +VLTPTRELA QI +QF LG MN+RV ++ GG +V Q EL KK
Sbjct: 61 LSQWSDDPSGMFGVVLTPTRELAIQIAEQFTALGSSMNIRVCLVVGGESIVKQALELQKK 120
Query: 125 PHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEAD 159
PH +IATPGRLA H+ + L+R+K+LVLDEAD
Sbjct: 121 PHFIIATPGRLAHHILSSGEEVVGGLSRVKYLVLDEAD 158
>gi|161784286|sp|Q5ACU6.2|RRP3_CANAL RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 539
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 4/158 (2%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L P L+ +++ PT IQ IPH L +D IG A+TGSGKT AFA+PIL
Sbjct: 123 KTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 182
Query: 66 QK-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
Q W + PY FALVL PTREL +QI D F LG M LR S I GGMDM+DQ ++L +
Sbjct: 183 QSLWHAQQPY--FALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMR 240
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPH+++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 241 KPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 278
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 108/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF DL + L + C +G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 24 RSFKDLGVTDVLCKACDQLGWKVPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFALPIL 83
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LAKKP
Sbjct: 84 QALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQTTVIVGGIDTMSQSLALAKKP 143
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H++IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 144 HVIIATPGRLVDHLENTKGFNLRALKFLVMDEADRI 179
>gi|388502288|gb|AFK39210.1| unknown [Lotus japonicus]
Length = 460
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 106/155 (68%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L LN L C+ +G K P++IQ +P D IG A+TGSGKT AFALPILQ
Sbjct: 11 TFKSLGLNDALCEACEKLGWKNPSKIQCEALPIAFQKRDIIGLAETGSGKTGAFALPILQ 70
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
P +FALVLTPTRELAYQI +QF LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 71 ALLATPQRLFALVLTPTRELAYQISEQFEALGSSIGVKCAVIVGGMDMMSQSIALAKKPH 130
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IVIATPGRL DHL+ FSL I++LV+DEADR+
Sbjct: 131 IVIATPGRLVDHLENTKGFSLRSIQYLVMDEADRI 165
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 109/159 (68%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ KSF +L + L C +G KTPT+IQ IP L D IG A+TGSGKT AFAL
Sbjct: 13 EAAKSFKELGVTEVLCEACDQLGWKTPTKIQVESIPLALQGRDIIGLAETGSGKTGAFAL 72
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ E P FALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LA
Sbjct: 73 PILQALLETPQRFFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDMMAQSLALA 132
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 133 KKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 171
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 108/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+++G K+PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 59 KTFKDLGVIDSLCEACESLGYKSPTPIQQESIPPALAGRDLIGLAETGSGKTAAFALPIL 118
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI F LG ++++R ++I GGMDMV Q L KKP
Sbjct: 119 QALLDKPQPLFGLVLAPTRELAYQISKSFEGLGILISVRCAVIVGGMDMVTQSIALGKKP 178
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 179 HIIVATPGRLLDHLENTKGFSLRALKYLVMDEADRL 214
>gi|189188460|ref|XP_001930569.1| ATP-dependent RNA helicase DBP8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972175|gb|EDU39674.1| ATP-dependent RNA helicase DBP8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 514
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SFT L + PWL+ ++ +K PT IQ + IP +L +DCIG ++TG+GKT+AF++PILQ
Sbjct: 85 SFTSLNVAPWLVASLASMEIKRPTGIQASCIPEILKGKDCIGGSRTGTGKTVAFSVPILQ 144
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIFA+++TPTRELA QI +Q + +++ +ITGG D Q LA +PH
Sbjct: 145 KWSEDPSGIFAVIVTPTRELAIQIYEQVKAISAPQSMKPILITGGSDQRSQAIALASRPH 204
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLA+H+ T + L R+KF+V DEADRL
Sbjct: 205 VVIATPGRLAEHIRTSGEDTICGLRRVKFVVFDEADRL 242
>gi|157115632|ref|XP_001658272.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108876828|gb|EAT41053.1| AAEL007274-PA [Aedes aegypti]
Length = 442
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 110/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ S+ D+ L L C+ + K P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 53 EEKQASWEDMGLIDTLCEACRALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKTGAFA 112
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E+P FA++LTPTRELAYQI +QF LG + ++ +I GGMDMV Q L
Sbjct: 113 LPILQALLENPQRYFAVILTPTRELAYQISEQFEALGASIGIKCCVIVGGMDMVSQALHL 172
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
A+KPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 173 ARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMDEADRI 212
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 110/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ S+ D+ L L C+ + K P++IQ+ IP L +D IG A+TGSGKT AFA
Sbjct: 53 EEKQASWEDMGLIDTLCEACRALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKTGAFA 112
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E+P FA++LTPTRELAYQI +QF LG + ++ +I GGMDMV Q L
Sbjct: 113 LPILQALLENPQRYFAVILTPTRELAYQISEQFEALGASIGIKCCVIVGGMDMVSQALHL 172
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
A+KPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 173 ARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMDEADRI 212
>gi|118578051|sp|Q0U8V9.1|DBP8_PHANO RecName: Full=ATP-dependent RNA helicase DBP8
Length = 508
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF + + PWL+ ++ +K PT IQKA IP +L DCIG ++TG+GKT+AF++PILQ
Sbjct: 78 SFASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQ 137
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIF L++TPTRELA QI +Q + +++ ++TGG D +Q LA +PH
Sbjct: 138 KWAEDPSGIFGLIITPTRELAIQIYEQVKAISAPQSMKPILVTGGSDQREQAIALASRPH 197
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLA+H+ T + L R++F+V DEADRL
Sbjct: 198 VVIATPGRLAEHIKTSGEDTICGLRRVRFVVFDEADRL 235
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L ++ L CQ +G P++IQ+A +PH L +D IG A+TGSGKT AFA+P+L
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVLTPTRELA+QIG QF LG + L ++I GG+DM Q LA++P
Sbjct: 104 QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRP 163
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ F+L +KFL++DEADR+
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRI 199
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C ++G KTPT IQ IP L D +G A+TGSGKT AFALPIL
Sbjct: 49 KTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPIL 108
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELA QI + F LG ++++R ++I GGMDM+ Q L KKP
Sbjct: 109 QALMEKPQPYFGLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMDMISQSISLGKKP 168
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 169 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 204
>gi|171686908|ref|XP_001908395.1| hypothetical protein [Podospora anserina S mat+]
gi|170943415|emb|CAP69068.1| unnamed protein product [Podospora anserina S mat+]
Length = 576
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/162 (50%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + +K PT IQ+ IP +L DCIG ++TGSGKT+AF++
Sbjct: 142 DSNTTFESLGVRPWLVQSLANMAIKRPTAIQRESIPMLLKGRDCIGGSRTGSGKTVAFSV 201
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+W E+P IF ++LTPTRELA QI +Q + +L+ ++TGG DM Q LA
Sbjct: 202 PILQQWAENPSAIFGVILTPTRELALQIFEQVKAISSPHSLKAILVTGGADMRAQAIALA 261
Query: 123 KKPHIVIATPGRLADHLDTC---NTFSLNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ T L R++F+VLDEADRL
Sbjct: 262 QRPHIVIATPGRLADHIRTSGYDTVCGLGRVRFVVLDEADRL 303
>gi|356528665|ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine
max]
Length = 587
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 115/171 (67%), Gaps = 9/171 (5%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL L W ++ C+ +G++ P +Q+ IP VL +G +TGSGKT AFALPIL +
Sbjct: 64 FGDLGLAEWAVKTCRELGMRRPRPVQRRCIPRVLEGRHVLGIDETGSGKTAAFALPILHR 123
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E P+G+FALV+TPTRELA+Q+ +QF LG ++LR++++ GGMDM+ Q KELA +PH+
Sbjct: 124 LAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQTKELAARPHL 183
Query: 128 VIATPGR----LADHLDTCNTFSLNRIKFLVLDEADR---LSLMTSLKFFF 171
VIATPGR L ++ D FS R KFLVLDEADR + L+F F
Sbjct: 184 VIATPGRIHALLRNNPDIPPVFS--RTKFLVLDEADRVLDVGFQEELRFIF 232
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+++ K PT IQ+ IP L D D IG A+TGSGKT AFALPIL
Sbjct: 57 KTFKELGIVDSLCEACESLNYKFPTPIQEKSIPIALQDRDIIGLAETGSGKTAAFALPIL 116
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELA+QIG F LG ++LR ++I GG+DMV Q L KKP
Sbjct: 117 QALLDKPQPLFGLVLAPTRELAHQIGQAFEALGSSISLRCAVIVGGLDMVPQAVALGKKP 176
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 177 HIIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRL 212
>gi|384487072|gb|EIE79252.1| hypothetical protein RO3G_03957 [Rhizopus delemar RA 99-880]
Length = 462
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 107/154 (69%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+DL ++ L C+ + K PTEIQK IP + D IG A+TGSGKT AFA+PI+Q+
Sbjct: 25 FSDLGVSKELCEACEKMNFKHPTEIQKESIPWAIEGRDIIGLAQTGSGKTAAFAIPIIQR 84
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
++P FA VL PTRELAYQI + F LG V+ +R ++I GGMDM+ Q LAK+PHI
Sbjct: 85 LWQNPQAFFACVLAPTRELAYQIAETFESLGSVIGVRCAVIVGGMDMMTQSIALAKRPHI 144
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DHL+ F+L +K+LV+DEADRL
Sbjct: 145 IVCTPGRLQDHLENTKGFNLKHLKYLVMDEADRL 178
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 107/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ ++SF DL L P LI C+ + PT IQ IP L D IG A+TGSGKT AFA+
Sbjct: 69 EDLQSFNDLNLVPELIEACKNLNFDKPTPIQARAIPPALEGRDIIGLAQTGSGKTAAFAI 128
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL + ED +A VL PTRELA Q + F LG +M +R + I GGM+M+DQ +EL
Sbjct: 129 PILNRLWEDKQPYYACVLAPTRELAQQTKETFDSLGALMGVRSTCIVGGMNMMDQARELM 188
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL +++FLV+DEADRL
Sbjct: 189 RKPHIIIATPGRLMDHLENTKGFSLRKLRFLVMDEADRL 227
>gi|406697360|gb|EKD00623.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 582
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 85/161 (52%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF L L+ I + +K PTEIQ A +P +L DCIG AKTGSGKTLAFAL
Sbjct: 115 DTSASFASLGLSQPAITALAQLNIKKPTEIQVACVPPILAGRDCIGGAKTGSGKTLAFAL 174
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL+ DP+GI+A+VLTPTRELAYQ+ +QF+ +GK + L + + GGMDM+ Q + L
Sbjct: 175 PILESIARDPFGIYAVVLTPTRELAYQLAEQFMAVGKPLGLTTTTVVGGMDMLSQAQALQ 234
Query: 123 KKPHIVIATPGRLADHL--DTCNTFSLNRIKFLVLDEADRL 161
++PH+V+ATPGRL D L D L R++ LVLDEADR+
Sbjct: 235 RRPHVVVATPGRLCDLLRSDGVGANPLARVRALVLDEADRM 275
>gi|171691382|ref|XP_001910616.1| hypothetical protein [Podospora anserina S mat+]
gi|170945639|emb|CAP71752.1| unnamed protein product [Podospora anserina S mat+]
Length = 490
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G K PT IQ+ IP L D D IG A+TGSGKT AFALPIL
Sbjct: 62 KTFKDLGIVDSLCEACDRLGYKQPTAIQQEAIPLALQDRDIIGIAETGSGKTAAFALPIL 121
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +FALVL PTRELA QI F LG ++NLR +++ GG+DMV Q L KKP
Sbjct: 122 QALLDKPQPLFALVLAPTRELAAQIAQSFEALGSLINLRCALLLGGLDMVQQAIALGKKP 181
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+V+ATPGRL DHL+ FSL +++ V+DEADRL
Sbjct: 182 HVVVATPGRLLDHLEKTKGFSLRNLRYCVMDEADRL 217
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L P LI+ CQ + PT IQ IP L D IG A+TGSGKT AFA+PIL
Sbjct: 74 SFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILN 133
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K ED +A VL PTRELA QI + F LG +M +R + I GGM+M+DQ ++L +KPH
Sbjct: 134 KLWEDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPH 193
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 194 IIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRL 228
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 105/158 (66%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F L L L++ + + K PT+IQ +IPH L +D IG A TGSGKT AFALP
Sbjct: 13 PPATFKSLGLIDSLLQALEQVNHKVPTDIQTEVIPHALEGKDIIGVASTGSGKTAAFALP 72
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQK E+P G+FA VL PTRELAYQI QF LG M +R ++I GG+ V Q LAK
Sbjct: 73 ILQKLWEEPKGLFACVLAPTRELAYQISQQFESLGSDMGVRCAVIVGGVPTVPQAVALAK 132
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPH+V+ATPGRL HL F L +KFLVLDEADRL
Sbjct: 133 KPHVVVATPGRLLWHLQETKGFGLANLKFLVLDEADRL 170
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 110/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +KSF DL + L C +G K+PT+IQ IP L +D IG A+TGSGKT AFA
Sbjct: 33 DETVKSFKDLGVTEVLCEACDQLGWKSPTKIQIEAIPVALQGKDVIGLAETGSGKTGAFA 92
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ P + LVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 93 LPILQSLLASPQRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVL 152
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ FSL +KFLV+DEADR+
Sbjct: 153 AKKPHVVIATPGRLIDHLENTKGFSLRALKFLVMDEADRI 192
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 110/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL + L + C+ + K+PT+IQ IP L +D IG A+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGIVDVLCKACEDLKWKSPTKIQYEAIPLALEGKDIIGLAETGSGKTAAFALPILQ 78
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 79 ALLENPQRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPH 138
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ FSL +KFLV+DEADR+
Sbjct: 139 ILIATPGRLVDHLENTKGFSLRSLKFLVMDEADRI 173
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 111/159 (69%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D KS+ DL L L C+ + K P++IQ+ IP L +D IG A+TGSGKT AFAL
Sbjct: 53 DVSKSWEDLGLIDTLCTACRGLKWKAPSKIQREAIPLALQGKDIIGLAETGSGKTGAFAL 112
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ ++P FA+VLTPTRELAYQI +QF LG + ++ +I GGMD+V Q +LA
Sbjct: 113 PILQALLDNPQRYFAVVLTPTRELAYQISEQFEALGATIGVKCCVIVGGMDLVTQAIQLA 172
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL I++LV+DEADR+
Sbjct: 173 RKPHIIIATPGRLVDHLENTKGFSLKAIRYLVMDEADRI 211
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C ++G KTPT IQ IP L D +G A+TGSGKT AFALPIL
Sbjct: 49 KTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPIL 108
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELA QI + F LG ++++R ++I GGMDM+ Q L KKP
Sbjct: 109 QALMEKPQPYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKP 168
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 169 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 204
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ +G K PT IQ+ IP L + D IG A+TGSGKT AFALPIL
Sbjct: 90 KTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPIL 149
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +FALVL PTRELA QI F LG +++LR ++I GGMDMV Q L KKP
Sbjct: 150 QALLDKPAPLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKP 209
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 210 HVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRL 245
>gi|451998004|gb|EMD90469.1| hypothetical protein COCHEDRAFT_1179307 [Cochliobolus
heterostrophus C5]
Length = 1062
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + PWL+ ++ +K PT IQ + IP +L +DCIG ++TG+GKT+AF++PILQ
Sbjct: 633 SFASLNVAPWLVASLASMAIKRPTGIQASCIPEILKGKDCIGGSRTGTGKTIAFSVPILQ 692
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIFA+++TPTRELA QI +Q + +++ +ITGG D Q ELA +PH
Sbjct: 693 KWAEDPSGIFAVIITPTRELAIQIYEQVKAISAPQSMKPILITGGSDQRAQAIELASRPH 752
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLA+H+ T + L R++F+V DEADRL
Sbjct: 753 VVIATPGRLAEHIRTSGEDTICGLRRVRFVVFDEADRL 790
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C ++G KTPT IQ IP L D +G A+TGSGKT AFALPIL
Sbjct: 49 KTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPIL 108
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELA QI + F LG ++++R ++I GGMDM+ Q L KKP
Sbjct: 109 QALMEKPQPYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKP 168
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 169 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 204
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 105/160 (65%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E SF +L L P LI+ C + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 71 EKTFTSFNELDLVPELIQACHNLNFSKPTPIQSKSIPPALEGHDIIGLAQTGSGKTAAFA 130
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL K ED +A +L PTRELA QI + F LG +M +R I GGM+M+DQ +EL
Sbjct: 131 IPILNKLWEDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQSREL 190
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 191 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 230
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ +G K PT IQ+ IP L + D IG A+TGSGKT AFALPIL
Sbjct: 90 KTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPIL 149
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +FALVL PTRELA QI F LG +++LR ++I GGMDMV Q L KKP
Sbjct: 150 QALLDKPAPLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKP 209
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 210 HVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRL 245
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + + C+ + PT IQ IP+ L D IG A+TGSGKT AFA
Sbjct: 60 EEQTKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFA 119
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+P+LQ E+P ++ +VL PTRELAYQI + F LG M LR +++ GGM+M+ Q L
Sbjct: 120 IPVLQSLYENPQPLYCVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNMMTQAVAL 179
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KKPH+++ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 180 SKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMDEADRL 219
>gi|15219185|ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
gi|75336890|sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|4966350|gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family [Arabidopsis thaliana]
gi|332191310|gb|AEE29431.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
Length = 491
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 108/159 (67%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L W + C+ +G++ PT +Q +P +L D +G A+TGSGKT AFALPIL
Sbjct: 59 NFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILH 118
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ EDPYG+FALV+TPTRELA+Q+ +QF LG +NLR S+I GGMDM+ Q L +PH
Sbjct: 119 RLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPH 178
Query: 127 IVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRL 161
IVI TPGR L ++ D FS R KFLVLDEADR+
Sbjct: 179 IVITTPGRIKVLLENNPDVPPVFS--RTKFLVLDEADRV 215
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E ++SF++L L P L+ + PT IQ IPH L +D IG A+TGSGKT AFA
Sbjct: 85 ESKVESFSELNLIPELLETINEMKFTKPTPIQAEAIPHALEGKDIIGLAQTGSGKTAAFA 144
Query: 62 LPILQK-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
+PILQ W + PY F LVL PTRELAYQI + F LG M LR I GGMDM+DQ +
Sbjct: 145 IPILQSLWDAQTPY--FGLVLAPTRELAYQIKETFDALGSSMGLRTVCIVGGMDMMDQAR 202
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+L ++PHI++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 203 DLMRRPHILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 244
>gi|451847073|gb|EMD60381.1| hypothetical protein COCSADRAFT_174666 [Cochliobolus sativus
ND90Pr]
Length = 1123
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + PWL+ ++ +K PT IQ + IP +L +DCIG ++TG+GKT+AF++PILQ
Sbjct: 694 SFASLNVAPWLVASLASMAIKRPTGIQASCIPEILKGKDCIGGSRTGTGKTIAFSVPILQ 753
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIFA+++TPTRELA QI +Q + +++ +ITGG D Q ELA +PH
Sbjct: 754 KWAEDPSGIFAVIITPTRELAIQIYEQVKAISAPQSMKPILITGGSDQRAQAIELASRPH 813
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLA+H+ T + L R++F+V DEADRL
Sbjct: 814 VVIATPGRLAEHIRTSGEDTICGLRRVRFVVFDEADRL 851
>gi|348689923|gb|EGZ29737.1| hypothetical protein PHYSODRAFT_309945 [Phytophthora sojae]
Length = 482
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 110/159 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L ++ + + +G P++IQ+ IPH L +D IG A+TGSGKT AF +PIL
Sbjct: 31 KSFQELGVDAAICEAIEAVGWSQPSKIQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPIL 90
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q +P ++ALVL PTRELAYQIG+QF LG + L+ + + GG+DM+ Q LA+KP
Sbjct: 91 QSLLRNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKP 150
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
H+VIATPGRL DHL+ FSL +KFLVLDEADR+ M
Sbjct: 151 HVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSM 189
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 109/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+ + K+PT+IQK IP L D IG A+TGSGKT +FALPILQ
Sbjct: 33 TFKSLGVVDVLCEACEQLKWKSPTKIQKEAIPVALQGRDVIGLAETGSGKTASFALPILQ 92
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LAKKPH
Sbjct: 93 ALLENPQRLFALVLTPTRELAFQISEQFEALGASIGVKSAVIVGGIDMMTQALLLAKKPH 152
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++IATPGRL DHL+ FSL +K+LV+DEADR+
Sbjct: 153 VIIATPGRLVDHLENTKGFSLKSLKYLVMDEADRI 187
>gi|401880747|gb|EJT45062.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 582
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 85/161 (52%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF L L+ I + +K PTEIQ A +P +L DCIG AKTGSGKTLAFAL
Sbjct: 115 DTSASFASLGLSQPAITALAQLNIKKPTEIQVACVPPILAGRDCIGGAKTGSGKTLAFAL 174
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL+ DP+GI+A+VLTPTRELAYQ+ +QF+ +GK + L + + GGMDM+ Q + L
Sbjct: 175 PILESIARDPFGIYAVVLTPTRELAYQLAEQFMAVGKPLGLTTTTVVGGMDMLSQAQALQ 234
Query: 123 KKPHIVIATPGRLADHL--DTCNTFSLNRIKFLVLDEADRL 161
++PH+V+ATPGRL D L D L R + LVLDEADR+
Sbjct: 235 RRPHVVVATPGRLCDLLRSDGVGANPLARARVLVLDEADRM 275
>gi|402218296|gb|EJT98373.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 476
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 107/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L L L+ C+ + K PT IQ A IP L +D IG A+TGSGKT AFAL
Sbjct: 36 DPNVTFSSLGLIEPLVDACKQLNFKRPTPIQAAAIPPALEGKDIIGLAETGSGKTAAFAL 95
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQK DP F +VL PTRELAYQI QF LG + +R +++ GG+ MV Q L+
Sbjct: 96 PILQKLWHDPKPFFCVVLAPTRELAYQISQQFEALGSTIGVRCAVLIGGVKMVPQAVALS 155
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PHIV+ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 156 KRPHIVVATPGRLQDHLENTKGFSLRGLKYLVMDEADRL 194
>gi|406603762|emb|CCH44787.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 435
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 105/159 (66%), Gaps = 14/159 (8%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F + ++ WL + + TPT IQKA DCIG AKTGSGKT+AF P+L K
Sbjct: 4 FKSIGVSRWLSESLNAMRIYTPTAIQKAC-------HDCIGGAKTGSGKTIAFGAPMLTK 56
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP GIF LVLTPTRELA QI +QF LG MN+R+++I GG MV+Q +L KPH
Sbjct: 57 WSEDPMGIFGLVLTPTRELALQIAEQFAALGAAMNIRIAVIVGGESMVEQAIKLQGKPHF 116
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADH+ DT L R+++LVLDEADRL
Sbjct: 117 VIATPGRLADHILNSGEDTIE--GLKRVRYLVLDEADRL 153
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L ++ L CQ +G P++IQ+A +PH L +D IG A+TGSGKT AFA+P+L
Sbjct: 54 KTFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 113
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVLTPTRELA+QIG QF LG + L ++I GG+DM Q LA++P
Sbjct: 114 QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRP 173
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ F+L +KFL++DEADR+
Sbjct: 174 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRI 209
>gi|383854020|ref|XP_003702520.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Megachile rotundata]
Length = 404
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 111/155 (71%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL + L + C+ + K+PT+IQ+ IP L +D IG A+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGIVDVLCKACEDLKWKSPTKIQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQ 78
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 79 ALLENPQRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPH 138
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 139 ILIATPGRLIDHLENTKGFNLRSLKFLVMDEADRI 173
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 77 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 136
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHIVIATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 MRKPHIVIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236
>gi|116195380|ref|XP_001223502.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
gi|118595827|sp|Q2H1Q8.1|RRP3_CHAGB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|88180201|gb|EAQ87669.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
Length = 493
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Query: 2 EDPI-KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
E+P K+F DL + L C+ +G K PT IQ+ IP L D D IG A+TGSGKT AF
Sbjct: 60 EEPAPKTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTGAF 119
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPILQ + P +FALVL PTRELA QI F LG +++LR ++I GG+DMV Q
Sbjct: 120 ALPILQALLDKPQPLFALVLAPTRELAAQIAQSFEALGSLISLRCALILGGLDMVQQAIA 179
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L KKPH+V+ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 180 LGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDEADRL 220
>gi|169617257|ref|XP_001802043.1| hypothetical protein SNOG_11806 [Phaeosphaeria nodorum SN15]
gi|160703370|gb|EAT80850.2| hypothetical protein SNOG_11806 [Phaeosphaeria nodorum SN15]
Length = 1091
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF + + PWL+ ++ +K PT IQKA IP +L DCIG ++TG+GKT+AF++PILQ
Sbjct: 661 SFASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQ 720
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIF L++TPTRELA QI +Q + +++ ++TGG D +Q LA +PH
Sbjct: 721 KWAEDPSGIFGLIITPTRELAIQIYEQVKAISAPQSMKPILVTGGSDQREQAIALASRPH 780
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLA+H+ T + L R++F+V DEADRL
Sbjct: 781 VVIATPGRLAEHIKTSGEDTICGLRRVRFVVFDEADRL 818
>gi|407924387|gb|EKG17439.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 412
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 104/141 (73%), Gaps = 3/141 (2%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ +K PT IQK IP ++ DCIG ++TGSGKT+AFA+PILQKW EDP IFA++LTPT
Sbjct: 1 MAIKKPTGIQKGCIPEIIKGRDCIGGSRTGSGKTVAFAVPILQKWSEDPVAIFAVILTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCN 143
RELA QI +QF +G NL+ ++TGG DM Q LA +PH+VIATPGRLADH+++
Sbjct: 61 RELALQIYEQFNAIGGPQNLKTILVTGGTDMRSQAIALASRPHVVIATPGRLADHINSSG 120
Query: 144 TFS---LNRIKFLVLDEADRL 161
+ L R++F+VLDEADRL
Sbjct: 121 EDTICGLRRVRFVVLDEADRL 141
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 110/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L C+ + +TP++IQK IP L D IG A+TGSGKT AFALPILQ
Sbjct: 31 TFKELGVVDVLCEACEALKWRTPSKIQKEAIPVALQGRDIIGLAETGSGKTAAFALPILQ 90
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P +FAL+LTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LAKKPH
Sbjct: 91 ALLENPARLFALILTPTRELAFQISEQFEALGSTIGIKSAVIVGGIDMMTQAMMLAKKPH 150
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRL DHL+ F+L +++LV+DEADR+
Sbjct: 151 VVIATPGRLIDHLENTKGFTLKNLRYLVMDEADRI 185
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C ++G K PT IQ IP L D +G A+TGSGKT AFALPIL
Sbjct: 49 KTFKDLGIIDSLCDACTSLGYKAPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPIL 108
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELA QI + F LG ++++R ++I GGMDM+ Q L KKP
Sbjct: 109 QALMEKPQPYFGLVLAPTRELAVQISESFEALGSLISVRCAVIVGGMDMISQSISLGKKP 168
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 169 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 204
>gi|432871166|ref|XP_004071865.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Oryzias latipes]
Length = 439
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E +K+F DL + L C +G K+PT+IQ IP L +D IG A+TGSGKT AFA
Sbjct: 35 EAAVKTFKDLGVTDVLCEACDQLGWKSPTKIQVEAIPVALQGKDVIGLAETGSGKTGAFA 94
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ P + LVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 95 LPILQSLLASPQRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVL 154
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DH++ FSL +KFLV+DEADR+
Sbjct: 155 AKKPHIVIATPGRLIDHMENTKGFSLRALKFLVMDEADRI 194
>gi|403417356|emb|CCM04056.1| predicted protein [Fibroporia radiculosa]
Length = 569
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 86/169 (50%), Positives = 116/169 (68%), Gaps = 7/169 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L ++ L+ + +++PTEIQ A +P +L + +TGSGKT+AFALPILQ
Sbjct: 107 TFASLGISSALLSALSKMSIRSPTEIQAACLPPLLQGK---FSNRTGSGKTIAFALPILQ 163
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DPYGIFALVLTPTRELA+QI +QF VLG +N+R +++ GGMDM+ Q EL +PH
Sbjct: 164 RLAVDPYGIFALVLTPTRELAFQISEQFAVLGSALNVRTAVVVGGMDMMTQALELNNRPH 223
Query: 127 IVIATPGRLADHL-DTCNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
+V+ATPGR+ D L T + L+R+KFLVLDEADRL + L F F
Sbjct: 224 VVVATPGRIVDLLKSTAGEWDLSRVKFLVLDEADRLLTPTFAPELSFLF 272
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Query: 1 MED-PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLA 59
+ED P K+F DL + L C+ + K PT IQ+ IP L D IG A+TGSGKT A
Sbjct: 54 VEDAPKKTFKDLGIVDALCEACEKLNYKYPTPIQEKSIPVALEGRDIIGLAETGSGKTAA 113
Query: 60 FALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
FALP+LQ + P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q
Sbjct: 114 FALPVLQALLDKPQPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAI 173
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L KKPHI++ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 174 ALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRL 215
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E +K+F DL + L C +G K+PT+IQ IP L +D IG A+TGSGKT AFA
Sbjct: 35 EAAVKTFKDLGVTDVLCEACDQLGWKSPTKIQVEAIPVALQGKDVIGLAETGSGKTGAFA 94
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ P + LVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 95 LPILQSLLASPQRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVL 154
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DH++ FSL +KFLV+DEADR+
Sbjct: 155 AKKPHIVIATPGRLIDHMENTKGFSLRALKFLVMDEADRI 194
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 111/155 (71%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL + L + C+ + K+PT+IQ+ IP L +D IG A+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGIVDVLCKACEDLKWKSPTKIQRESIPLTLQGKDIIGLAETGSGKTAAFALPILQ 78
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 79 ALLENPQRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPH 138
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 139 ILIATPGRLIDHLENTKGFNLRSLKFLVMDEADRI 173
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SFT+L L P LI+ C+ + + PT IQ IP LN +D IG A+TGSGKT AFA
Sbjct: 63 DETFESFTELNLVPELIQACKNLNYEKPTPIQSKSIPPALNGKDIIGLAQTGSGKTAAFA 122
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL D +A +L+PTRELA QI + F LG +M +R I GGM+M+DQ ++L
Sbjct: 123 IPILNSLWHDQLPYYACILSPTRELAQQIKETFDSLGSLMGVRTVCIVGGMNMMDQARDL 182
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++++LV+DEADRL
Sbjct: 183 MRKPHIIIATPGRLMDHLENTRGFSLRKLRYLVMDEADRL 222
>gi|429861232|gb|ELA35928.1| ATP-dependent RNA helicase dbp8 [Colletotrichum gloeosporioides
Nara gc5]
Length = 520
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 100/141 (70%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP SF+ L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 106 DPNTSFSSLNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 165
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IFA+VLTPTRELA QI +QF + +L+ +ITGG DM Q LA
Sbjct: 166 PILQKWAEDPTAIFAVVLTPTRELALQIFEQFKAISAPQSLKAILITGGSDMRPQAIALA 225
Query: 123 KKPHIVIATPGRLADHLDTCN 143
++PH+VIATPGRLADH+ T
Sbjct: 226 QRPHVVIATPGRLADHIRTSG 246
>gi|291230627|ref|XP_002735268.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47-like
[Saccoglossus kowalevskii]
Length = 446
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 109/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L C+ + K PT+IQ+ IP L +D IG A+TGSGKT AFALPILQ
Sbjct: 24 TFKSLGLVDVLCETCEQLKWKEPTKIQRESIPLALEGKDVIGLAETGSGKTGAFALPILQ 83
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E P +FAL+LTPTRELA+QI +QF LG + ++ +++ GG+DM+ Q +LAKKPH
Sbjct: 84 DLLEHPQRLFALILTPTRELAFQISEQFEALGSAIGIKCAVVVGGIDMMSQALQLAKKPH 143
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 144 VVVATPGRLVDHLENTKGFNLRSVKYLVMDEADRI 178
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 119 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 178
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 179 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 238
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 239 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 278
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 119 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 178
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 179 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 238
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 239 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 278
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF DL + L C +G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 26 RSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPIL 85
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P +FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LAKKP
Sbjct: 86 QALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVHTTVIVGGIDAMSQSLALAKKP 145
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 146 HVIIATPGRLVDHLENTKGFNLRALKYLVMDEADRI 181
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 119 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 178
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 179 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 238
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 239 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 278
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F L + L C+++ K PT IQ+ IP L + D IG A+TGSGKT AFALPIL
Sbjct: 57 KTFKQLGIVDSLCEACESLNYKFPTPIQEKSIPVALQNRDIIGLAETGSGKTAAFALPIL 116
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELA+QIG F LG ++LR ++I GG+DMV Q L KKP
Sbjct: 117 QALLDKPQPLFGLVLAPTRELAHQIGQSFEALGSSISLRCAVIVGGLDMVPQAVALGKKP 176
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 177 HIIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRL 212
>gi|396493590|ref|XP_003844093.1| similar to ATP-dependent RNA helicase dbp8 [Leptosphaeria maculans
JN3]
gi|312220673|emb|CBY00614.1| similar to ATP-dependent RNA helicase dbp8 [Leptosphaeria maculans
JN3]
Length = 505
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 109/157 (69%), Gaps = 3/157 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L + PWL+ ++ +K PT IQ+A IP +L DCIG ++TG+GKT+AF++PILQK
Sbjct: 78 FASLDVAPWLVASLASMEIKKPTGIQQACIPEILKGRDCIGGSRTGTGKTVAFSVPILQK 137
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP GIF L++TPTRELA QI +Q + +++ ++TGG D +Q LA +PHI
Sbjct: 138 WAEDPSGIFGLIITPTRELAIQIYEQVKAISAPQSMKPILVTGGSDQREQAIALASRPHI 197
Query: 128 VIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
VIATPGRLA+H+ T + L R++F+V DEADRL
Sbjct: 198 VIATPGRLAEHIRTSGEDTICGLRRVRFVVFDEADRL 234
>gi|330923108|ref|XP_003300102.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
gi|311325897|gb|EFQ91780.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
Length = 516
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ + K PT IQ IP L D IG A+TGSGKT AF LPIL
Sbjct: 86 KTFADLGIREELCDACENLKFKNPTPIQTQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 145
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P +F L+L PTRELAYQI Q LG ++N++ + + GGMDMV Q L+K+P
Sbjct: 146 QSLLEKPQPLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKRP 205
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DHL+ FSL +K++VLDEADRL
Sbjct: 206 HIVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRL 241
>gi|189205104|ref|XP_001938887.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985986|gb|EDU51474.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 517
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ + K PT IQ IP L D IG A+TGSGKT AF LPIL
Sbjct: 87 KTFADLGVREELCDACENLKFKNPTPIQTQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 146
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P +F L+L PTRELAYQI Q LG ++N++ + + GGMDMV Q L+K+P
Sbjct: 147 QSLLEKPQPLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKRP 206
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DHL+ FSL +K++VLDEADRL
Sbjct: 207 HIVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRL 242
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 110/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL + L + C+ + K+PT+IQ IP L +D IG A+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGIVDILHKACEDLKWKSPTKIQCEAIPLALEGKDIIGLAETGSGKTAAFALPILQ 78
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 79 ALLENPQRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPH 138
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ FSL +KFLV+DEADR+
Sbjct: 139 ILIATPGRLVDHLENTKGFSLRSLKFLVMDEADRI 173
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 77 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 136
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 113/163 (69%), Gaps = 4/163 (2%)
Query: 3 DPIK----SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTL 58
DPI+ +++DL L L + C+ + KTP++IQ+ IP L +D IG A+TGSGKT
Sbjct: 32 DPIEEAPVTWSDLGLVDVLCKACEQLKWKTPSKIQRESIPVALQGKDIIGLAETGSGKTA 91
Query: 59 AFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
AFALPILQ E+P FAL+LTPTRELA+QI +QF LG + ++ +I GG+DM Q
Sbjct: 92 AFALPILQALLENPQRHFALILTPTRELAFQISEQFEALGSGIGVKSIVIVGGLDMTSQA 151
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPHI+IATPGRL DHL F+L +KFLV+DEADR+
Sbjct: 152 LMLAKKPHIIIATPGRLVDHLSNTKGFNLRALKFLVMDEADRI 194
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 77 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 136
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 119 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 178
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 179 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 238
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 239 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 278
>gi|358060304|dbj|GAA94058.1| hypothetical protein E5Q_00705 [Mixia osmundae IAM 14324]
Length = 447
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 104/154 (67%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+ L L L + C+ +G K P+EIQ IP L D + A+TGSGKT AFALPILQ
Sbjct: 14 FSSLGLIEPLCKVCEQLGYKKPSEIQAQSIPFALQGRDLVALAQTGSGKTAAFALPILQA 73
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+P FA VL PTRELAYQI +QF LG + +R ++I GGMDM+ Q L+K+PHI
Sbjct: 74 LWNEPSPFFACVLAPTRELAYQISEQFQALGSTIGVRCAVIVGGMDMMTQSIALSKRPHI 133
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ATPGRL DHL+ FSL IK+LV+DEADRL
Sbjct: 134 IVATPGRLQDHLENTKGFSLKAIKYLVMDEADRL 167
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 77 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 136
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 77 DESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 136
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L ++ L C +G P++IQ+A +PH L +D IG A+TGSGKT AFA+P+L
Sbjct: 44 KTFAELGVSQPLCDACHRLGWVKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVLTPTRELA+QIG QF LG + L V++I GG+DM Q LA++P
Sbjct: 104 QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALARRP 163
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ F+L +KFL++DEADR+
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRI 199
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 108/160 (67%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED + +F L ++P ++ C+ +G K PTEIQ+ IP L +D +G A+TGSGKT AF+
Sbjct: 9 EDTVVTFEKLGVDPQIVEACKKLGFKNPTEIQRKAIPEALAGKDIVGLAQTGSGKTAAFS 68
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+P+LQ P G+F LVL PTRELA QI DQ LG V+ ++ +++ GG+D + Q L
Sbjct: 69 IPMLQALLAKPSGLFGLVLAPTRELAVQISDQIEALGAVIGVKCAVLVGGIDTMSQSMAL 128
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI++ TPGR+ HL+ F+L +K+ V+DEADRL
Sbjct: 129 AKKPHIIVGTPGRVVYHLENTKGFNLKTLKYFVMDEADRL 168
>gi|169609619|ref|XP_001798228.1| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
gi|143462316|sp|Q0UK12.2|RRP3_PHANO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|160701880|gb|EAT84178.2| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
Length = 546
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P K+F DL + L C+ +G KT T IQ IP L +D IG A+TGSGKT AF LP
Sbjct: 113 PKKTFADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLP 172
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQ + P F L++ PTRELAYQI Q LG ++N++ + + GGMDMV Q L+K
Sbjct: 173 ILQALLDKPQAYFGLIMAPTRELAYQISQQVDALGSIINVKCATLVGGMDMVPQAIALSK 232
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+PHI++A+PGRL DHL+ FSL +K+LVLDEADRL
Sbjct: 233 RPHIIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRL 270
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED K+F DL + L C +G K+PT+IQ +P L +D IG A+TGSGKT AFA
Sbjct: 34 EDTPKTFKDLGVTEVLCEACDQLGWKSPTKIQIEAVPVALQGKDVIGLAETGSGKTGAFA 93
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ P + LVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q L
Sbjct: 94 LPILQSLLASPQRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVL 153
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 154 AKKPHIVIATPGRLIDHLENTKGFTLRALKFLVMDEADRI 193
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 109/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL + L + C+ + K PT+IQ+ IP + +D IG A+TGSGKT AFALPILQ
Sbjct: 25 TWKDLGIVDSLCQACEDLKWKAPTKIQREAIPLTIQGKDVIGLAETGSGKTAAFALPILQ 84
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +QF LG + ++ +I GGMDM+ Q LAKKPH
Sbjct: 85 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCVVIVGGMDMMTQSLMLAKKPH 144
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 145 IIIATPGRLVDHLENTKGFNLRSLKFLVMDEADRI 179
>gi|301119991|ref|XP_002907723.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262106235|gb|EEY64287.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 479
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L ++ + + +G P++IQ+ IPH L +D IG A+TGSGKT AF +PILQ
Sbjct: 29 SFAELGVDSAICEAIEAVGWSAPSKIQQQAIPHGLAGKDIIGLAETGSGKTGAFVIPILQ 88
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+P ++ALVL PTRELAYQIG+QF LG + L+ + + GG+DM+ Q LA+KPH
Sbjct: 89 SLLHNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGIDMMQQQVALARKPH 148
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
+VIATPGRL DHL+ FSL +KFLVLDEADR+ M
Sbjct: 149 VVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSM 186
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +SF++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA
Sbjct: 77 DEXFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFA 136
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 137 IPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 97/135 (71%)
Query: 27 KTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTREL 86
K PTEIQ ++PH L D IG A TGSGKT AFALPILQK E+P G+FA VL PTREL
Sbjct: 4 KAPTEIQAEVLPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEPKGLFACVLAPTREL 63
Query: 87 AYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFS 146
A QI QF +G M +R + I GG+D++ Q LAKKPHIV+ATPGRL DHL+ FS
Sbjct: 64 AVQIAQQFESIGSAMGVRCATIIGGVDIMAQKVALAKKPHIVVATPGRLNDHLEETKGFS 123
Query: 147 LNRIKFLVLDEADRL 161
L ++FLVLDEADRL
Sbjct: 124 LRSLQFLVLDEADRL 138
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 106/155 (68%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L + C+++ KTPT IQ IP+ L ++D IG A+TGSGKT AFALP+LQ
Sbjct: 60 TFASLGLIEPLCKACESLNFKTPTPIQTESIPYALQNKDIIGLAQTGSGKTAAFALPVLQ 119
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ P FA VL PTRELAYQI QF LG + ++ +I GGMDM+ Q L+K+PH
Sbjct: 120 SLWDSPSAFFACVLAPTRELAYQISQQFDALGSTIGVKTVVIVGGMDMMSQAIALSKRPH 179
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ FSL ++FL++DEADRL
Sbjct: 180 VIVATPGRLHDHLEHTKGFSLRNLQFLIMDEADRL 214
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF DL + L C +G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 25 RSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPIL 84
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LAKKP
Sbjct: 85 QALLDAPQRLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKP 144
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 145 HIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRI 180
>gi|328855261|gb|EGG04388.1| hypothetical protein MELLADRAFT_53003 [Melampsora larici-populina
98AG31]
Length = 447
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 8/181 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL ++ LI +++ +++PTEIQ IP +LN DCIG ++TGSGKT+AF++PILQ
Sbjct: 7 TFQDLNVHSSLISALKSLSIQSPTEIQAKTIPDILNGRDCIGSSQTGSGKTIAFSIPILQ 66
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVM--NLRVSIITGGMDMVDQGKELAKK 124
+DP +AL+LTPTRELA+QI Q VLG + ++I GG++M Q EL K+
Sbjct: 67 GLAKDPSSCYALILTPTRELAFQISSQLKVLGSLAIPGFSSTVIVGGIEMTSQAIELRKR 126
Query: 125 PHIVIATPGRLADHLDTCN----TFSLNRIKFLVLDEADRLSLMTSLKFFFFFFFLKYYI 180
PH++IATPGRL DHL + N + L R KFLVLDEADR ++TS + + +++
Sbjct: 127 PHVIIATPGRLVDHLKSSNGEIGNWDLRRCKFLVLDEADR--MLTSTFADPLAYLINHHL 184
Query: 181 P 181
P
Sbjct: 185 P 185
>gi|330926544|ref|XP_003301506.1| hypothetical protein PTT_13026 [Pyrenophora teres f. teres 0-1]
gi|311323638|gb|EFQ90408.1| hypothetical protein PTT_13026 [Pyrenophora teres f. teres 0-1]
Length = 514
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + PWL+ ++ +K PT IQ + IP +L +DCIG ++TG+GKT+AF++PILQ
Sbjct: 85 NFASLNVAPWLVASLASMEIKRPTGIQASCIPEILKGKDCIGGSRTGTGKTVAFSVPILQ 144
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIFA+++TPTRELA QI +Q + +++ +ITGG D Q LA +PH
Sbjct: 145 KWSEDPSGIFAVIVTPTRELAIQIYEQVKAISAPQSMKPILITGGSDQRSQAIALASRPH 204
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLA+H+ T + L R+KF+V DEADRL
Sbjct: 205 VVIATPGRLAEHIRTSGEDTICGLRRVKFVVFDEADRL 242
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 113/161 (70%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ED +F L + L C+ +G KTP++IQ+ IP L +D IG A+TGSGKT AF
Sbjct: 9 IEDDKTTFKSLGVVDALCEACKQLGWKTPSKIQREAIPVALQGKDVIGLAETGSGKTGAF 68
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPILQ ++P +FAL+LTPTRELA+QI +Q LG + ++ ++I GG+DM+ Q
Sbjct: 69 ALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALM 128
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPHI+IATPGRL DHL+ FSL +K+LV+DEADR+
Sbjct: 129 LAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRI 169
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C ++G K PT IQ IP L D +G A+TGSGKT AFALPIL
Sbjct: 49 KTFKDLGIIDSLCDACTSLGYKNPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPIL 108
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELA QI + F LG ++++R ++I GGMDM+ Q L KKP
Sbjct: 109 QALMEKPQPYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKP 168
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 169 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 204
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C +G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 62 KSFRDLGIVDSLCDACDRLGYKRPTPIQEQSIPLALQGRDIIGIAETGSGKTAAFALPIL 121
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +FALVL PTRELA QI F LG +++LR ++I GG+DMV Q L KKP
Sbjct: 122 QALLDKPQPLFALVLAPTRELAAQITQAFEALGSLISLRCALILGGLDMVQQAIALGKKP 181
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+V+ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 182 HVVVATPGRLLDHLEKTKGFSLRNLKYLVMDEADRL 217
>gi|328771154|gb|EGF81194.1| hypothetical protein BATDEDRAFT_87448 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 104/147 (70%)
Query: 15 PWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYG 74
P LI C T+G K P++IQ A IP L D IG A+TGSGKT AFALPILQ +P
Sbjct: 20 PELIEACTTLGFKKPSDIQCASIPVALTGRDIIGLAQTGSGKTAAFALPILQTLFANPQH 79
Query: 75 IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGR 134
++A V+ PTRELA+QI +QF LG V+ +R ++I GGMDM+ Q L+KKPH++I TPGR
Sbjct: 80 LYACVIAPTRELAFQISEQFEALGSVIGVRCAVIVGGMDMMSQSIALSKKPHVIICTPGR 139
Query: 135 LADHLDTCNTFSLNRIKFLVLDEADRL 161
L DHL+ F+L +K+LV+DEADRL
Sbjct: 140 LVDHLENTKGFNLKHLKYLVMDEADRL 166
>gi|255722942|ref|XP_002546405.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
gi|240130922|gb|EER30484.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
Length = 483
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 108/158 (68%), Gaps = 4/158 (2%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L P L+ + + PT IQ IPH L +D IG A+TGSGKT AFA+PIL
Sbjct: 68 KTFKELNLVPDLLESIENMKFTKPTPIQSESIPHALEGKDIIGLAQTGSGKTAAFAIPIL 127
Query: 66 QK-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
Q W + PY F LVL PTRELA+QI + F LG M LR S I GGMDM+DQ ++L +
Sbjct: 128 QSLWHAQQPY--FGLVLAPTRELAFQIKETFDALGSSMGLRSSCIVGGMDMMDQARDLMR 185
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++ATPGR+ DHL+ F+L +K+LV+DEADRL
Sbjct: 186 KPHIIVATPGRIMDHLEHTKGFTLKNLKYLVMDEADRL 223
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L ++ L C +G P++IQ+A +PH L +D IG A+TGSGKT AFA+P+L
Sbjct: 44 KTFAELGVSQPLCDACLRLGWTKPSKIQQAALPHALEGKDVIGLAETGSGKTGAFAIPVL 103
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVLTPTRELA+QIG QF LG + L V++I GG+DM Q LA++P
Sbjct: 104 QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALARRP 163
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ F+L +KFL++DEADR+
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRI 199
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L+ + + K PT+IQ +PH L D IG A TGSGKT AFALPILQ
Sbjct: 24 TFKSLGLIDPLLEALEQMKYKAPTDIQAEALPHALQGRDIIGVASTGSGKTAAFALPILQ 83
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K EDP G+FA V+ PTRELA+QI QF +G M +R + I GG+D+ Q LAKKPH
Sbjct: 84 KLWEDPKGLFACVIAPTRELAFQITQQFESIGSAMGVRCATIIGGVDIQSQKIALAKKPH 143
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL +HL+ FSL +KFLVLDEADRL
Sbjct: 144 VIVATPGRLLEHLEETKGFSLRSLKFLVLDEADRL 178
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF++L L P LI C+ + PT IQ IP L +D IG A+TGSGKT AFA+PIL
Sbjct: 105 ESFSELNLVPELIEACENLKYSKPTPIQAEAIPPALEGKDIIGLAQTGSGKTAAFAIPIL 164
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ D +A VL PTRELA QI + F LG M +R + I GGM+M+DQ ++L +KP
Sbjct: 165 NQLWHDQQPYYACVLAPTRELAQQIKETFDSLGGAMGVRTTCIVGGMNMIDQARDLMRKP 224
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI+IATPGRL DHL+ FS+ ++KFLV+DEADRL
Sbjct: 225 HIIIATPGRLMDHLENTKGFSMRKLKFLVMDEADRL 260
>gi|367014487|ref|XP_003681743.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
gi|359749404|emb|CCE92532.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
Length = 501
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 109/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E ++SF+ L + P L++ C+ + PT IQ IP L +D IG A+TGSGKT AFA
Sbjct: 77 EKTLESFSGLNIVPELLQACKNLNFTKPTPIQAKAIPPALEGKDIIGLAQTGSGKTAAFA 136
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL + D +A +L+PTRELA QI + F LG +M R + I GGM+M+DQ ++L
Sbjct: 137 LPILNRLWHDQSPYYACILSPTRELAQQIKETFDSLGTIMGARTTCIVGGMNMMDQARDL 196
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 103/147 (70%)
Query: 15 PWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYG 74
P L C+ + PT++Q IP L D IG A+TGSGKT AFALPILQ E P
Sbjct: 71 PVLCEACKQLNWTDPTKVQIEAIPLALQGRDVIGLAETGSGKTAAFALPILQALLEHPQR 130
Query: 75 IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGR 134
+FALVLTPTRELAYQI +QF LG + ++V++I GG+DMV Q LAKKPH+++ATPGR
Sbjct: 131 LFALVLTPTRELAYQIAEQFEALGACIGIKVAVIVGGVDMVTQALCLAKKPHVIVATPGR 190
Query: 135 LADHLDTCNTFSLNRIKFLVLDEADRL 161
L DHL+ FSL +K+LV+DEADR+
Sbjct: 191 LVDHLENTKGFSLRSLKYLVMDEADRI 217
>gi|396459541|ref|XP_003834383.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
gi|312210932|emb|CBX91018.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
Length = 516
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ + TPT IQ IP L D IG A+TGSGKT AF LPIL
Sbjct: 87 KTFADLGVREELCDACENLKFTTPTPIQTQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 146
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F L+L PTRELAYQI Q LG ++N++ + + GGMDMV Q L+K+P
Sbjct: 147 QALLDKPQALFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKRP 206
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRL DHL+ FSL +K++VLDEADRL
Sbjct: 207 HIVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRL 242
>gi|402590562|gb|EJW84492.1| DEAD box ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 462
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C + K PT++Q A +PH D IG A+TGSGKT AFA+PILQ
Sbjct: 25 TFQKLGVTDVLCEACDRLNWKKPTKVQIAALPHAFKKRDIIGLAETGSGKTAAFAIPILQ 84
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E P +FALVLTPTRELA+QIG+QF LG + + +++I GG+D V Q LAK+PH
Sbjct: 85 ALLETPQKLFALVLTPTRELAFQIGEQFEALGASIGILIAVIVGGIDTVTQSLALAKRPH 144
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 145 VIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
>gi|449017072|dbj|BAM80474.1| DEAD box protein [Cyanidioschyzon merolae strain 10D]
Length = 453
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 105/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + L C+ + + PT IQ+ IP L +D +G A+TGSGKT AFA+PILQ
Sbjct: 20 SFAALGVCAVLCDACRLLNYREPTPIQREAIPAALAGKDIVGLAQTGSGKTAAFAIPILQ 79
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
EDP FALVL+PTRELA+QI +QFL LG + +RV+ + GGMDMV Q LAK+PH
Sbjct: 80 FLLEDPRPYFALVLSPTRELAFQISEQFLALGSEIGVRVATLVGGMDMVGQAVTLAKRPH 139
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ TPGR+ DHL F+L ++ LVLDEADRL
Sbjct: 140 VVVGTPGRVVDHLTATKGFTLKHVRILVLDEADRL 174
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C + K PT++Q A +PH D IG A+TGSGKT AFA+PILQ
Sbjct: 25 TFQQLGVTDVLCEACDRLNWKKPTKVQIAALPHAFKKRDIIGLAETGSGKTAAFAIPILQ 84
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E P +FALVLTPTRELA+QIG+QF LG + + +++I GG+D V Q LAK+PH
Sbjct: 85 ALLETPQKLFALVLTPTRELAFQIGEQFEALGASIGILIAVIVGGVDTVTQSLALAKRPH 144
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 145 VIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
>gi|156837514|ref|XP_001642781.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160358661|sp|A7TS37.1|RRP3_VANPO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|156113348|gb|EDO14923.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 506
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 105/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+DL L P LI C+ + PT IQ IP L D IG A+TGSGKT AFA+PIL
Sbjct: 87 SFSDLDLVPELIEACKNLNFAKPTPIQARSIPPALQGHDIIGLAQTGSGKTAAFAIPILN 146
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L +KPH
Sbjct: 147 RLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSACIVGGMNMMDQARDLMRKPH 206
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 207 IIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRL 241
>gi|406860112|gb|EKD13172.1| ATP-dependent rRNA helicase RRP3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 497
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 100/155 (64%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL + L C +G K PT IQ IP L D D I A+TGSGKT AFALPILQ
Sbjct: 72 SFKDLGIVDELCDACTALGYKAPTPIQAESIPLALQDRDLIALAETGSGKTAAFALPILQ 131
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ P F LVL PTRELAYQI F LG + +R ++I GGMDMV Q L KKPH
Sbjct: 132 SLLDKPQPFFGLVLAPTRELAYQISQSFEALGSKIGVRCAVIVGGMDMVPQAIALGKKPH 191
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++A+PGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 192 IIVASPGRLLDHLENTKGFSLRALKYLVMDEADRL 226
>gi|401839240|gb|EJT42545.1| RRP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 404
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 107/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ +SF +L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA+
Sbjct: 80 ESFESFNELNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAFAI 139
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 140 PILNRLWHDQEPYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLM 199
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 200 RKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 238
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E +F++L L P L+ + + PT IQ IPH L +D IG A+TGSGKT AFA
Sbjct: 60 EQQFHTFSELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFA 119
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PILQ E +ALVL PTRELAYQI + F LG M +R I GGMDM+DQ ++L
Sbjct: 120 IPILQSLWEAQRPYYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDL 179
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI++ATPGR+ DHL+ FSL +++LV+DEADRL
Sbjct: 180 MRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRL 219
>gi|170046412|ref|XP_001850760.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869183|gb|EDS32566.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 438
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 104/145 (71%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C+ + K P++IQ+ IP L +D IG A+TGSGKT AFALPILQ E+P F
Sbjct: 7 LCEACKALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKTGAFALPILQALLENPQRYF 66
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
A++LTPTRELAYQI +QF LG + ++ +I GGMDMV Q +LA+KPHI+IATPGRL
Sbjct: 67 AVILTPTRELAYQISEQFEALGASIGVKCCVIVGGMDMVSQALQLARKPHIIIATPGRLV 126
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ F+L +K+LV+DEADR+
Sbjct: 127 DHLENTKGFNLKAVKYLVMDEADRI 151
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 80/155 (51%), Positives = 102/155 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL + P ++ C +G K PT IQ IP L D IG A+TGSGKT AF +PILQ
Sbjct: 122 SFQDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQ 181
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++P FA VL PTRELAYQI Q LG + +R + I GGMDM+ Q L+K+PH
Sbjct: 182 ALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPH 241
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 242 VIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRL 276
>gi|170583206|ref|XP_001896476.1| ATP-dependent RNA helicase T26G10.1 in chromosome III [Brugia
malayi]
gi|158596304|gb|EDP34674.1| ATP-dependent RNA helicase T26G10.1 in chromosome III, putative
[Brugia malayi]
Length = 462
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C + K PT++Q A +PH D IG A+TGSGKT AFA+PILQ
Sbjct: 25 TFQKLGVTDVLCEACDRLNWKKPTKVQIAALPHAFKKRDIIGLAETGSGKTAAFAIPILQ 84
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E P +FALVLTPTRELA+QIG+QF LG + + +++I GG+D V Q LAK+PH
Sbjct: 85 ALLETPQKLFALVLTPTRELAFQIGEQFEALGASIGILIAVIVGGVDTVTQSLALAKRPH 144
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 145 VIVATPGRLVDHLENTKGFNLRALKYLVMDEADRI 179
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ IK+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 16 EEEIKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 75
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 76 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 135
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 136 AKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 175
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E I+SF + L P ++ Q + PT IQ IPH L +D IG A+TGSGKT AFA
Sbjct: 69 ETAIQSFAEFDLIPEILESIQAMKFTKPTPIQAESIPHALAGKDIIGLAQTGSGKTAAFA 128
Query: 62 LPILQK-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
+PILQ W + PY F+LVL PTRELA+QI + F LG M LR I GGMDM+DQ +
Sbjct: 129 IPILQALWHAKTPY--FSLVLAPTRELAFQIKETFDALGSSMGLRSVCIVGGMDMMDQAR 186
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+L +KPH+++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 187 DLMRKPHVIVATPGRITDHLEHTKGFSLKNLKYLVMDEADRL 228
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 109/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+ + K+PT+IQK IP L +D IG A+TGSGKT +FALPILQ
Sbjct: 26 TFKSLGIVDVLCEACEQLKWKSPTKIQKESIPLALQGKDVIGLAETGSGKTGSFALPILQ 85
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E P +FALVLTPTRELA+QI +QF LG + ++ +++ GG+DM+ Q LAKKPH
Sbjct: 86 ALLETPQRLFALVLTPTRELAFQISEQFEALGAGIGVKCAVVVGGIDMMTQALTLAKKPH 145
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRL DHL+ FSL +K+LV+DEADR+
Sbjct: 146 VVIATPGRLVDHLENTKGFSLKALKYLVMDEADRI 180
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 107/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ +SF +L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA+
Sbjct: 80 ESFESFNELNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAFAI 139
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 140 PILNRLWHDQEPYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLM 199
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 200 RKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 238
>gi|320583325|gb|EFW97540.1| ATP-dependent rRNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 470
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 103/154 (66%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L P ++ + + TPT IQ +PH L D IG A+TGSGKT AFA+PILQ
Sbjct: 69 FKELGLQPDILDAIEKLNFSTPTPIQAQSLPHSLQGRDIIGIAQTGSGKTAAFAIPILQA 128
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E FA VL PTRELAYQI + F LG M LR S I GGMDM++Q KEL +KPH+
Sbjct: 129 LWEAQTPYFACVLAPTRELAYQIRETFDALGVNMGLRCSTIVGGMDMMEQAKELMRKPHV 188
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 189 IVATPGRLMDHLENTKGFSLKALKYLVMDEADRL 222
>gi|312370822|gb|EFR19136.1| hypothetical protein AND_23001 [Anopheles darlingi]
Length = 485
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 98/125 (78%)
Query: 37 IPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLV 96
IP +L +DCIG AKTGSGKT AFALPILQK E+P FALVLTPT ELA+QI +QF+V
Sbjct: 5 IPRILQGQDCIGAAKTGSGKTFAFALPILQKLSEEPTANFALVLTPTHELAHQIAEQFIV 64
Query: 97 LGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLD 156
G+ MN RV ++TGG D + + ++L +PHI++A PGRLADHL+ CNT+S ++FLV+D
Sbjct: 65 AGQPMNARVCVVTGGTDQLLEAQKLQSRPHIIVAMPGRLADHLNGCNTYSFAALQFLVVD 124
Query: 157 EADRL 161
EADR+
Sbjct: 125 EADRV 129
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 107/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D ++F+ L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA+
Sbjct: 77 DSFETFSQLNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAFAI 136
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 137 PILNRLWHDQEPYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLM 196
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ FSL ++KFLV+DEADRL
Sbjct: 197 RKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 235
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/155 (50%), Positives = 103/155 (66%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+DL + P ++ C +G K PT IQ IP L D IG A+TGSGKT AF +PILQ
Sbjct: 110 AFSDLGVIPQIVEACTNMGFKHPTPIQVKSIPEALQSRDVIGLAQTGSGKTAAFTIPILQ 169
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++P FA VL PTRELAYQI Q LG + +R + I GGMDM+ Q L+K+PH
Sbjct: 170 ALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPH 229
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 230 VIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRL 264
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L P L+ Q + PT IQ IPH L +D IG A TGSGKT AFA+PILQ
Sbjct: 72 TFAELNLVPDLLEAIQQMNFAKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQ 131
Query: 67 K-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
W + PY F LVL PTRELA+QI D F LG M LR I GGMDM+DQ ++L +K
Sbjct: 132 ALWHAQTPY--FGLVLAPTRELAFQIKDTFDALGATMGLRSVCIVGGMDMMDQARDLMRK 189
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHI++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 190 PHIIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 226
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 109/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + L C+ + K+P++IQ+ IP L D IG A+TGSGKT AFA+PILQ
Sbjct: 23 SFKSLGVVDVLCEACERLKWKSPSKIQREAIPVALQGSDIIGLAETGSGKTGAFAIPILQ 82
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + P ++AL+LTPTRELA+QI +QF LG + ++ +++ GG+DM+ Q LAKKPH
Sbjct: 83 KLLDSPQRLYALILTPTRELAFQISEQFEALGSAIGVKCAVVVGGIDMMSQSLMLAKKPH 142
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 143 IIIATPGRLIDHLENTKGFNLRALKFLVMDEADRI 177
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 113/162 (69%), Gaps = 2/162 (1%)
Query: 2 EDPIKSFT--DLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLA 59
++ +K T DL + L + C+ + K+PT+IQ IP L +D IG A+TGSGKT A
Sbjct: 12 QENVKELTWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEGKDVIGLAETGSGKTAA 71
Query: 60 FALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
FA+PILQ E+P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q
Sbjct: 72 FAIPILQALLENPQRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQAL 131
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPHI+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 132 LLAKKPHILIATPGRLVDHLENTKGFNLRSLKFLVMDEADRI 173
>gi|320164743|gb|EFW41642.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 594
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 107/160 (66%), Gaps = 4/160 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ +F L + P L+ C +G K PT IQ+ IP L D IG A+TGSGKT +FA
Sbjct: 142 EEAPTTFQALGIVPSLVEACSRMGFKAPTPIQRQSIPVALTGRDIIGLAETGSGKTASFA 201
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LP+LQK E P +FAL+LTPTRELAYQI +QF LG + ++ +I GGMDM Q L
Sbjct: 202 LPVLQKLLEKPQPLFALILTPTRELAYQISEQFEALGSTIGVKCCVIVGGMDMTTQAIAL 261
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KKPHI+IATPGR+ DHL+ + +KFL++DEADR+
Sbjct: 262 SKKPHILIATPGRIVDHLENTKGY----LKFLIMDEADRI 297
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C ++ K PT IQ IP L D +G A+TGSGKT AFALPIL
Sbjct: 49 KSFKDLGIIDSLCDACTSLRYKAPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPIL 108
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELA QI + F LG ++++R ++I GGMDM+ Q L KKP
Sbjct: 109 QALMEKPQPYFGLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMDMISQSISLGKKP 168
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 169 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 204
>gi|389638890|ref|XP_003717078.1| ATP-dependent RNA helicase DBP8 [Magnaporthe oryzae 70-15]
gi|374095502|sp|A4R8G3.3|DBP8_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP8
gi|351642897|gb|EHA50759.1| ATP-dependent RNA helicase DBP8 [Magnaporthe oryzae 70-15]
Length = 579
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + VK PT IQK I +L DCIG ++TGSGKT+AFA+
Sbjct: 145 DQNTTFESLGVEPWLVQSLANLAVKRPTGIQKGCIGEILKGRDCIGGSRTGSGKTIAFAV 204
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQK+ +DP IFA+VLT TRELA QI +QF + L+ ++I GG DM Q LA
Sbjct: 205 PILQKYAQDPSAIFAVVLTATRELALQIYEQFKAVSSPHVLKAALIIGGSDMRSQAIALA 264
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++P IVIATPGRLADH+ + + L R+KFLVLDEADRL
Sbjct: 265 QRPSIVIATPGRLADHIRSSGEDTICGLRRVKFLVLDEADRL 306
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L P L+ Q + PT IQ IPH L +D IG A TGSGKT AFA+PILQ
Sbjct: 69 TFAELNLVPDLLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQ 128
Query: 67 K-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
W + PY F LVL PTRELA+QI D F LG M LR I GGMDM+DQ ++L +K
Sbjct: 129 ALWHAQTPY--FGLVLAPTRELAFQIKDTFDALGTTMGLRSVCIVGGMDMMDQARDLMRK 186
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 187 PHIVVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 223
>gi|254565677|ref|XP_002489949.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|238029745|emb|CAY67668.1| Protein involved in rRNA processing [Komagataella pastoris GS115]
gi|328350360|emb|CCA36760.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 478
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 103/160 (64%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E +SF D L P ++ C+ + PT IQ IP+ L D IG A+TGSGKT AFA
Sbjct: 68 EQKYESFNDFGLVPEILEACEKLKYTKPTPIQAESIPYALKGRDIIGLAQTGSGKTAAFA 127
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+P+LQ E F VL PTRELAYQI + F LG M LR I GGMDM+DQ K+L
Sbjct: 128 IPVLQSLYEQATPFFCCVLAPTRELAYQIKETFDSLGSGMGLRSVCIVGGMDMIDQAKDL 187
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPH+++ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 188 MRKPHVIVATPGRLMDHLENTKGFSLKALKYLIMDEADRL 227
>gi|312370859|gb|EFR19169.1| hypothetical protein AND_22947 [Anopheles darlingi]
Length = 490
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 108/151 (71%)
Query: 11 LKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCE 70
L L L + C+ + K P++IQ+ IP LN +D IG A+TGSGKT AFALPILQ +
Sbjct: 53 LGLVDTLCQACRALKWKVPSKIQREAIPLALNGKDIIGLAETGSGKTAAFALPILQALLD 112
Query: 71 DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIA 130
+P FA+VLTPTRELAYQI +QF LG ++ ++ ++ GGMD+V Q +LA+KPHI+IA
Sbjct: 113 NPQRYFAVVLTPTRELAYQISEQFEALGTMIGVKCCVVVGGMDLVAQALQLARKPHIIIA 172
Query: 131 TPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
TPGRL DHL+ F L +K+LV+DEADR+
Sbjct: 173 TPGRLVDHLENTKGFGLKALKYLVMDEADRI 203
>gi|391867361|gb|EIT76607.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 413
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 105/141 (74%), Gaps = 3/141 (2%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ V+ PT IQKA IP +L DCIG ++TGSGKT+AFA+PILQKW +DP+GIFA+VLTPT
Sbjct: 1 MAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFAVPILQKWAQDPFGIFAVVLTPT 60
Query: 84 RELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCN 143
RELA QI +Q + +++ +ITGG DM Q L+++PH+VIATPGRLADH++T
Sbjct: 61 RELALQIYEQIKAISAPQSMKPLLITGGTDMRSQALALSQRPHVVIATPGRLADHINTSG 120
Query: 144 TFS---LNRIKFLVLDEADRL 161
+ L R++ +VLDEADRL
Sbjct: 121 EDTVCGLKRVRMVVLDEADRL 141
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 19 EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFA 78
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 79 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 138
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 139 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 178
>gi|385304922|gb|EIF48922.1| dbp8p [Dekkera bruxellensis AWRI1499]
Length = 398
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF ++ + WL + + TPT IQ A IP +L DCIG AKTGSGKT+AFA P+
Sbjct: 1 MKSFEEIGVPAWLREALHAMRITTPTPIQAATIPEILKGRDCIGGAKTGSGKTIAFAAPM 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L KW EDP GIF +VLTPTRELA QI +QF LG +NL V ++ GG M++Q + +
Sbjct: 61 LTKWAEDPCGIFGIVLTPTRELAMQIAEQFTALGANINLXVELVIGGESMIEQSNXIKEN 120
Query: 125 PHIVIATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
P VIATPGRLA +H D + L R+K+LVLDEADRL
Sbjct: 121 PDFVIATPGRLAHIMMEHPD--DVRGLKRVKYLVLDEADRL 159
>gi|115454521|ref|NP_001050861.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|75327677|sp|Q7Y183.1|RH10_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|31126733|gb|AAP44655.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|53370642|gb|AAU89137.1| DEAD/DEAH box helicase domain containing protein [Oryza sativa
Japonica Group]
gi|108710302|gb|ABF98097.1| ATP-dependent RNA helicase DDX47, putative, expressed [Oryza sativa
Japonica Group]
gi|113549332|dbj|BAF12775.1| Os03g0669000 [Oryza sativa Japonica Group]
gi|125545183|gb|EAY91322.1| hypothetical protein OsI_12939 [Oryza sativa Indica Group]
gi|215695397|dbj|BAG90588.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + P L+ C +G K PT IQ IPH L D IG +TGSGKT AFALPI+Q
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101
Query: 67 KWC--EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ P +FA VL+PTRELA+QIG QF LG + L +++ GG+D V Q LAK+
Sbjct: 102 ALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKR 161
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ TPGRL DHL FSLN++K+LVLDEAD+L
Sbjct: 162 PHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKL 198
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 111/160 (69%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED +++DL L L + C+ + P++IQK IP L +D IG A+TGSGKT AFA
Sbjct: 15 EDKPATWSDLGLVDVLCKACEQLKWAQPSKIQKEAIPVALQGKDVIGLAETGSGKTAAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E+P FAL+LTPTRELA+QI +Q LG + ++ ++I GGMDM+ Q L
Sbjct: 75 LPILQSLLENPQRYFALILTPTRELAFQISEQIEALGANIGVKCAVIVGGMDMMSQALIL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 135 AKKPHILIATPGRLLDHLENTKGFNLKALKYLVMDEADRI 174
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 79/154 (51%), Positives = 102/154 (66%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+DL + P ++ C +G K PT IQ IP L D IG A+TGSGKT AF +PILQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
++P FA VL PTRELAYQI Q LG + +R + I GGMDM+ Q L+K+PH+
Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHV 225
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 226 IVATPGRLQDHLENTKGFSLRGLQYLVMDEADRL 259
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 110/155 (70%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL + L + C+ + K+PT+IQ IP L +D IG A+TGSGKT AFA+PILQ
Sbjct: 24 TWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEGKDIIGLAETGSGKTAAFAIPILQ 83
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 84 ALLENPQRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALLLAKKPH 143
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 144 ILIATPGRLVDHLENTKGFNLRSLKFLVMDEADRI 178
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 23 EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 82
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 83 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 142
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 143 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 182
>gi|348569356|ref|XP_003470464.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Cavia porcellus]
Length = 406
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 19 EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFA 78
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 79 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 138
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 139 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 178
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 2 EDPIK--SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLA 59
+D +K +F++LKL P L+ Q + PT IQ IPH L +D IG A+TGSGKT A
Sbjct: 65 DDEVKFSTFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAA 124
Query: 60 FALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
FA+PILQ E F LVL P RELAYQI + F LG M +R + GGMDM+DQ +
Sbjct: 125 FAIPILQSLWEAQTPYFGLVLAPARELAYQIKETFDALGSTMGVRTVCLVGGMDMMDQAR 184
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+L +KPHI+IATPGR+ DHL+ FSL +K+ V+DEAD+L
Sbjct: 185 DLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKL 226
>gi|395538709|ref|XP_003771317.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Sarcophilus harrisii]
Length = 411
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G KTPT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 25 KTFKDLGVTEVLCDACDQLGWKTPTKIQIEAIPMALEGRDIIGLAETGSGKTGAFALPIL 84
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
E P FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LAKKP
Sbjct: 85 NALLETPQRFFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKP 144
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 145 HVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 180
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G KTPT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 25 KTFKDLGVTEVLCDACDQLGWKTPTKIQIEAIPMALEGRDIIGLAETGSGKTGAFALPIL 84
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
E P FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LAKKP
Sbjct: 85 NALLETPQRFFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKP 144
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 145 HVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 180
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 110/160 (68%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ +F +L + L C + K P++IQK IP L +D IG A+TGSGKT AFA
Sbjct: 33 EEDTGTFQELGVVDVLCEACAELKWKHPSKIQKEAIPVALQGKDIIGLAETGSGKTGAFA 92
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E+P FAL+LTPTRELA+QI +QF LG + ++ ++I GGMDMV Q L
Sbjct: 93 LPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALIL 152
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 153 SKKPHIIIATPGRLVDHLENTKGFNLKALKYLVMDEADRI 192
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|392595723|gb|EIW85046.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 465
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 99/145 (68%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L++ + K PTEIQ +P L D IG A+TGSGKT AFALPILQK E+P G+F
Sbjct: 26 LLKALDQVNFKQPTEIQSQALPSALLGRDIIGVAETGSGKTAAFALPILQKLWEEPKGLF 85
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
A +L PTRELAYQI QF LG M +R ++ GG+D + Q LAK+PHI++ATPGRL
Sbjct: 86 ACILAPTRELAYQISQQFESLGSAMGVRCLVLVGGVDRMPQAVALAKRPHIIVATPGRLN 145
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL FSL +KFLVLDEADRL
Sbjct: 146 DHLQNTKGFSLRSLKFLVLDEADRL 170
>gi|149713748|ref|XP_001501504.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Equus caballus]
Length = 406
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 107/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
++ DL L L + C + K PT IQ+ IP L +D IG A+TGSGKT AFALPILQ
Sbjct: 19 TWKDLGLVDILCKTCLDLKWKEPTRIQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQ 78
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P FAL+LTPTRELA+QI +QF LG + ++ ++ GGMDM QG L KKPH
Sbjct: 79 ALLENPQRYFALILTPTRELAFQISEQFDALGSSIGVKTVVLVGGMDMHAQGMILEKKPH 138
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L ++KFLV+DEADR+
Sbjct: 139 IIIATPGRLVDHLENTKGFNLRQLKFLVMDEADRI 173
>gi|73997169|ref|XP_866840.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Canis lupus familiaris]
Length = 407
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 107/161 (66%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AF
Sbjct: 19 QEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAF 78
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q
Sbjct: 79 ALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 138
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 139 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 108/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+ +G K P++IQK IP L D IG A+TGSGKT +FALP+LQ
Sbjct: 28 TFKSLGVTDVLCEACEILGWKAPSKIQKESIPVALQGSDVIGLAETGSGKTGSFALPVLQ 87
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++P ++ LVLTPTRELA+QI +QF LG + ++ ++I GGMDM+ Q LAKKPH
Sbjct: 88 TLLDNPQRMYCLVLTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMMTQSMVLAKKPH 147
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 148 IIIATPGRLVDHLENTKGFNLRALKYLVMDEADRI 182
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 26 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 85
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 86 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 145
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 146 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 185
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 105/160 (65%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E +F +L L P L+ + + PT IQ IPH L +D IG A+TGSGKT AFA
Sbjct: 60 EQQFHTFLELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFA 119
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PILQ E +ALVL PTRELAYQI + F LG M +R I GGMDM+DQ ++L
Sbjct: 120 IPILQSLWEAQRPYYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDL 179
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI++ATPGR+ DHL+ FSL +++LV+DEADRL
Sbjct: 180 MRKPHILVATPGRIMDHLENTKGFSLKSLQYLVMDEADRL 219
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 79/155 (50%), Positives = 102/155 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + P +I C +G + PT IQ IP L D IG A+TGSGKT AF +PILQ
Sbjct: 116 TFADLGVIPQIIEACTNMGFQHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQ 175
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++P FA VL PTRELAYQI Q LG + +R + I GGMDM+ Q L+K+PH
Sbjct: 176 ALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPH 235
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 236 VIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRL 270
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEEAKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +KSF DL + L+ C ++G K PT+IQ +PH L +D IG A+TGSGKT AFA
Sbjct: 22 KEEVKSFKDLGICDQLVEACDSLGWKNPTKIQVEAVPHALEGKDLIGLAQTGSGKTGAFA 81
Query: 62 LPILQKWCEDPYG----IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
LPILQ E FA VL+PTRELA QI +QF LG + LR ++ GG+D+V Q
Sbjct: 82 LPILQALLESSQKSVQPFFACVLSPTRELAIQIAEQFEALGSGIGLRCGVLVGGVDIVQQ 141
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PHIV+ATPGRL DHL FSL +K+LVLDEADRL
Sbjct: 142 TLILAKRPHIVVATPGRLLDHLSNTKGFSLRTLKYLVLDEADRL 185
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|426371743|ref|XP_004052801.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Gorilla gorilla gorilla]
Length = 406
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 107/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+ + K PT+IQ+ +P L D IG A+TGSGKT +FALPILQ
Sbjct: 26 TFKSLGVVDVLCEACEQLKWKAPTKIQREALPVALQGRDVIGLAETGSGKTASFALPILQ 85
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LAKKPH
Sbjct: 86 ALLETPQRLFALVLTPTRELAFQISEQFEALGASIGVKSAVIVGGIDMMTQALTLAKKPH 145
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 146 VIIATPGRLVDHLENTKGFNLKSLKYLVMDEADRI 180
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 13 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 72
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 73 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 132
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 133 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 172
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 15 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 75 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 135 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 174
>gi|161761223|pdb|3BER|A Chain A, Human Dead-Box Rna-Helicase Ddx47, Conserved Domain I In
Complex With Amp
Length = 249
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 39 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 98
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 99 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 158
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 159 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 198
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|402885240|ref|XP_003906072.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Papio anubis]
Length = 406
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 73 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 132
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 133 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 192
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 193 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 232
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|159127543|gb|EDP52658.1| ATP dependent RNA helicase (Dbp8), putative [Aspergillus fumigatus
A1163]
Length = 577
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 7/164 (4%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ + SF L + PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AF
Sbjct: 106 LREEASSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAF 165
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP+GIF +VLTPTR I +Q + +++ +ITGG DM Q
Sbjct: 166 SVPMLQKWAEDPFGIFGVVLTPTR----SIFEQIKAISAPQSMKPVLITGGTDMRPQAIA 221
Query: 121 LAKKPHIVIATPGRLADHLDTC---NTFSLNRIKFLVLDEADRL 161
LA +PH+VIATPGRLADH+ + L R++ +VLDEADRL
Sbjct: 222 LAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRL 265
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|41327776|ref|NP_957518.1| probable ATP-dependent RNA helicase DDX47 isoform 2 [Homo sapiens]
gi|119616689|gb|EAW96283.1| hCG27698, isoform CRA_c [Homo sapiens]
Length = 406
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 104/145 (71%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C+ + KTPT+IQK IP L D IG A+TGSGKT AFALPILQ + P ++
Sbjct: 50 LCEACEQLKWKTPTKIQKEAIPVALQGSDVIGLAETGSGKTGAFALPILQTLLDKPQRLY 109
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
ALVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LAKKPHIVIATPGRL
Sbjct: 110 ALVLTPTRELAFQISEQFEALGASIGIKCAVIVGGIDMMTQSLMLAKKPHIVIATPGRLV 169
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ F+L +K+LV+DEADR+
Sbjct: 170 DHLENTKGFNLRSLKYLVMDEADRI 194
>gi|301765214|ref|XP_002918023.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Ailuropoda melanoleuca]
Length = 406
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|90076578|dbj|BAE87969.1| unnamed protein product [Macaca fascicularis]
Length = 255
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 101/156 (64%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ + PT IQ IP L D IG A+TGSGKT AF LPIL
Sbjct: 89 KTFADLGVREELCDACENLKFTNPTPIQAQAIPLALEGRDVIGLAETGSGKTAAFVLPIL 148
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E +F L+L PTRELAYQI Q LG ++N++ + + GGMDMV Q L+KKP
Sbjct: 149 QALLEKQQSLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKKP 208
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K++VLDEADRL
Sbjct: 209 HIIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRL 244
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 102/141 (72%)
Query: 21 CQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVL 80
C + PT+IQ+ IP VL +D IG A+TGSGKT AFALPILQ E+P FAL+L
Sbjct: 17 CIQLKWNEPTKIQREAIPLVLEGKDVIGLAETGSGKTAAFALPILQALLENPQRYFALIL 76
Query: 81 TPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLD 140
TPTRELA+QI +QF LG + ++ ++I GGMDM QG L KKPHI+IATPGRL DHL+
Sbjct: 77 TPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMHAQGLLLEKKPHIIIATPGRLVDHLE 136
Query: 141 TCNTFSLNRIKFLVLDEADRL 161
F+L +IKFL++DEADR+
Sbjct: 137 NTKGFNLRQIKFLIMDEADRI 157
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 101/156 (64%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C+ + PT IQ IP L D IG A+TGSGKT AF LPIL
Sbjct: 89 KTFADLGVREELCDACENLKFTNPTPIQAQAIPLALQGRDVIGLAETGSGKTAAFVLPIL 148
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E +F L+L PTRELAYQI Q LG ++N++ + + GGMDMV Q L+KKP
Sbjct: 149 QALLEKQQSLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKKP 208
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K++VLDEADRL
Sbjct: 209 HIIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRL 244
>gi|125587400|gb|EAZ28064.1| hypothetical protein OsJ_12029 [Oryza sativa Japonica Group]
Length = 472
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 104/157 (66%), Gaps = 2/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + P L+ C +G K PT IQ IPH L D IG +TGSGKT AF LPI+Q
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFGLPIIQ 101
Query: 67 KWC--EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ P +FA VL+PTRELA+QIG QF LG + L +++ GG+D V Q LAK+
Sbjct: 102 ALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKR 161
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ TPGRL DHL FSLN++K+LVLDEAD+L
Sbjct: 162 PHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKL 198
>gi|134254726|gb|ABO65093.1| DEAD box polypeptide 47 isoform 1 variant [Homo sapiens]
Length = 182
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 68
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 69 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 128
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 129 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 168
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 112 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 171
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 172 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 231
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 232 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 271
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ +P L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAVPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 19 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 78
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 79 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 138
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 139 AKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 178
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 82/145 (56%), Positives = 101/145 (69%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C +G K+PT+IQ IP L +D IG A+TGSGKT AFALPILQ P +
Sbjct: 6 LCEACDQLGWKSPTKIQIEAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASPQRLH 65
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
LVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LAKKPHIVIATPGRL
Sbjct: 66 TLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPGRLI 125
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ FSL +KFLV+DEADR+
Sbjct: 126 DHLENTKGFSLRAVKFLVMDEADRI 150
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ SF +L L P LI C + PT IQ IP L +D IG A+TGSGKT AFA
Sbjct: 62 EEGFSSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFA 121
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PIL + D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L
Sbjct: 122 IPILNRLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDL 181
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+KPHI+IATPGRL DHL+ F+L +++FLV+DEADRL
Sbjct: 182 MRKPHIIIATPGRLMDHLENTKGFALRKLQFLVMDEADRL 221
>gi|323304640|gb|EGA58403.1| Dbp8p [Saccharomyces cerevisiae FostersB]
Length = 412
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 98/139 (70%), Gaps = 7/139 (5%)
Query: 26 VKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRE 85
+ PT IQKA IP +L DCIG AKTGSGKT+AFA P+L KW EDP G+F +VLTPTRE
Sbjct: 3 ITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTKWSEDPSGMFGVVLTPTRE 62
Query: 86 LAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHL-----D 140
LA QI +QF LG MN+RVS+I GG +V Q +L +KPH +IATPGRLA H+ D
Sbjct: 63 LAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDD 122
Query: 141 TCNTFSLNRIKFLVLDEAD 159
T L R K+LVLDEAD
Sbjct: 123 TVG--GLMRAKYLVLDEAD 139
>gi|359473682|ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Vitis vinifera]
Length = 436
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL + L+ C+ +G KTP++IQ IPH L +D IG A+TGSGKT AFALPI
Sbjct: 8 VKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 67
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + P +FA VL+PTRELA QI +QF LG + L+ +++ GG+D Q LAK+
Sbjct: 68 LQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKR 127
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ T G L DHL FSL +K+LVLDEADRL
Sbjct: 128 PHIVVGTLGXLMDHLSNTKGFSLRTMKYLVLDEADRL 164
>gi|331222935|ref|XP_003324141.1| hypothetical protein PGTG_06043 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309303131|gb|EFP79722.1| hypothetical protein PGTG_06043 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 502
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + P L+ + + +P+EIQ+ IP +L DCIG ++TGSGKT+AFA+PILQ
Sbjct: 21 SFASLGVQPDLVAALTAMSITSPSEIQQKAIPDILAGRDCIGSSQTGSGKTVAFAIPILQ 80
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGK--VMNLRVSIITGGMDMVDQGKELAKK 124
+DP F L+LTPTRELA+QIG Q VLG V S+I GGMDM+ Q +L K+
Sbjct: 81 ALAKDPISCFCLILTPTRELAFQIGSQLKVLGSLAVPGFTYSVIVGGMDMMSQALDLNKR 140
Query: 125 PHIVIATPGRLADHLDTCN----TFSLNRIKFLVLDEADRL 161
PHI+IATPGRL DHL + ++L R KFLVLDEADR+
Sbjct: 141 PHIIIATPGRLVDHLKSAEGELGRWNLRRCKFLVLDEADRM 181
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AF
Sbjct: 18 VEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPMALQGRDIIGLAETGSGKTGAF 77
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPIL + P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q
Sbjct: 78 ALPILNALLDTPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 137
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 138 LAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 178
>gi|410963866|ref|XP_003988480.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Felis catus]
Length = 406
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPH++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|164661763|ref|XP_001732004.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
gi|159105905|gb|EDP44790.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
Length = 470
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 105/160 (65%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
+ SF+DL + + C+ + PT+IQ IPH L D IG A+TGSGKT AF+
Sbjct: 21 HEKASSFSDLGVIEPICEACEKLHFSAPTDIQAQAIPHALQGRDVIGLAQTGSGKTAAFS 80
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PILQ +DP +FA +L PTREL+YQI Q LG + +R + I GGMDM+ Q L
Sbjct: 81 IPILQGLWDDPRPLFACILAPTRELSYQISQQIEALGATIGVRCATIVGGMDMMTQSIAL 140
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PH+++ATPGRL DHL+ FSL +++LV+DEADRL
Sbjct: 141 SKRPHVIVATPGRLQDHLENTKGFSLRSLRYLVMDEADRL 180
>gi|213410545|ref|XP_002176042.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212004089|gb|EEB09749.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 461
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + + C+ + K P+ IQK IP L +D IG A+TGSGKT AFA+P++Q
Sbjct: 43 TFKELGVIDEICEACEKLNFKAPSAIQKEAIPAALKQQDIIGLAQTGSGKTAAFAIPVIQ 102
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P F +VL PTRELAYQI +QF LG M ++ +I GGMDMV Q ++KKPH
Sbjct: 103 ALWENPCPFFGVVLAPTRELAYQISEQFEALGGAMGVKSVVIVGGMDMVTQAVAISKKPH 162
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 163 ILVCTPGRLMDHLENTKGFSLRNLKYLVMDEADRL 197
>gi|71031306|ref|XP_765295.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68352251|gb|EAN33012.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 470
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 108/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + L R C+ +G K PT+IQ IP L+ +D IG A+TGSGKT AF +PILQ
Sbjct: 42 TFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQ 101
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E P +F+L+L PTREL+ QI +Q + LG + L V +I GG+DMV Q +L+KKPH
Sbjct: 102 KLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQLSKKPH 161
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ +PGR+ADHL FSL IK+LVLDEAD+L
Sbjct: 162 IIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKL 196
>gi|363750628|ref|XP_003645531.1| hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889165|gb|AET38714.1| Hypothetical protein Ecym_3217 [Eremothecium cymbalariae
DBVPG#7215]
Length = 486
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF DL + P LI C+ + PT IQ IP L D IG A+TGSGKT AFA+PIL
Sbjct: 66 ESFRDLDIVPELIEACENLKFTKPTPIQSKAIPPALQGNDIIGLAQTGSGKTAAFAIPIL 125
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L +KP
Sbjct: 126 NQLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIMGGMNMMDQARDLMRKP 185
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI+IATPGRL DHL+ FSL +++FLV+DEADRL
Sbjct: 186 HIIIATPGRLMDHLENTKGFSLRKLRFLVIDEADRL 221
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G KTPT+IQ IP L+ D IG A+TGSGKT AFALPIL
Sbjct: 25 KTFKDLGVTDVLCDACDQLGWKTPTKIQIEAIPMALDGRDIIGLAETGSGKTGAFALPIL 84
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ P FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LAKKP
Sbjct: 85 NALLDTPQRFFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKP 144
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H++IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 145 HVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 180
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 106/159 (66%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFAL
Sbjct: 23 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 82
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LA
Sbjct: 83 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 142
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 143 KKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 181
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 106/159 (66%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFAL
Sbjct: 23 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 82
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LA
Sbjct: 83 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 142
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 143 KKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 181
>gi|198413643|ref|XP_002129533.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 2 [Ciona intestinalis]
Length = 401
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 108/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ + +F L + L C +G K P++IQ+ IP L D IG A+TGSGKT AF +
Sbjct: 17 EAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDVIGLAETGSGKTGAFCI 76
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQ E+P +FALVLTPTRELA+QI +QF LG + ++ ++ GG+DM+ Q LA
Sbjct: 77 PVLQALLENPQRLFALVLTPTRELAFQIEEQFKALGSAIGIKTCVVVGGVDMMGQQIILA 136
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH+V+ATPGRL DHL+ F+L IKFLVLDEADR+
Sbjct: 137 KKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRI 175
>gi|149235261|ref|XP_001523509.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060561|sp|A5E6W6.1|RRP3_LODEL RecName: Full=ATP-dependent rRNA helicase RRP3
gi|146452918|gb|EDK47174.1| ATP-dependent rRNA helicase RRP3 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 106/157 (67%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
++SFT+ L P L+ Q++ PT IQ A IPH L +D +G A+TGSGKT AFA+PI
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ +ALVL PTRELA+QI + F LG M LR I GGM M++Q ++L +K
Sbjct: 157 LQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRK 216
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH++IATPGRL DHL+ FSL ++++LV+DE DR+
Sbjct: 217 PHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRM 253
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 108/159 (67%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ + +F L + L C +G K P++IQ+ IP L D IG A+TGSGKT AF +
Sbjct: 17 EAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDVIGLAETGSGKTGAFCI 76
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+LQ E+P +FALVLTPTRELA+QI +QF LG + ++ ++ GG+DM+ Q LA
Sbjct: 77 PVLQALLENPQRLFALVLTPTRELAFQIEEQFKALGSAIGIKTCVVVGGVDMMGQQIILA 136
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH+V+ATPGRL DHL+ F+L IKFLVLDEADR+
Sbjct: 137 KKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRI 175
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 99/156 (63%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L L C +G K PT IQ IP L D IG A+TGSGKT +F LPIL
Sbjct: 71 KTFKELGLIDSLCEACDKMGYKAPTPIQSESIPLALQGRDIIGLAETGSGKTASFVLPIL 130
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELAYQI LG +N+R + + GGMDMV Q L KKP
Sbjct: 131 QALMEKPQSFFGLVLAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGKKP 190
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 191 HIIVATPGRLLDHLENTKGFSLRSLKFLVMDEADRL 226
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 101/145 (69%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L + C + K PT IQ+ IP L +D IG A+TGSGKT AFALPILQ E P F
Sbjct: 6 LCKTCIDLKWKEPTRIQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLEQPQRYF 65
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
AL+LTPTRELA+QI +QF LG M ++ ++ GGMDM QG L KKPHI+IATPGRL
Sbjct: 66 ALILTPTRELAFQISEQFDALGSSMGVKTVVLVGGMDMHAQGMILEKKPHIIIATPGRLV 125
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ F+L ++KFLV+DEADR+
Sbjct: 126 DHLENTKGFNLRQLKFLVMDEADRI 150
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LAKKP
Sbjct: 84 NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSIALAKKP 143
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 144 HIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 103/159 (64%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L + L C +G PT IQK IP L +D IG A+TGSGKT AFALPIL
Sbjct: 83 KSFAELGVIDQLCDACANLGFTKPTAIQKESIPIALEGKDIIGLAETGSGKTAAFALPIL 142
Query: 66 QKWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
Q P F LVL PTRELAYQI QF LG ++N+R +++ GGMDMV Q L
Sbjct: 143 QALMAAPQHEQHKFGLVLAPTRELAYQISQQFEALGSLINVRCAVLVGGMDMVPQAIALN 202
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K PHIV+ATPGRL DHL+ FS+ +K+LV+DEADRL
Sbjct: 203 KNPHIVVATPGRLLDHLENTKGFSMRSLKYLVMDEADRL 241
>gi|336270890|ref|XP_003350204.1| hypothetical protein SMAC_01096 [Sordaria macrospora k-hell]
gi|380095599|emb|CCC07072.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 507
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 100/145 (68%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C+ +G K PT IQ IP L + D IG A+TGSGKT AFALPILQ + P +F
Sbjct: 108 LCEACERLGYKNPTPIQAESIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPQPLF 167
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
ALVL PTRELA QI F LG +++LR ++I GGMDMV Q L KKPH+++ATPGRL
Sbjct: 168 ALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRLL 227
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ FSL +++LV+DEADRL
Sbjct: 228 DHLEKTKGFSLRSMQYLVMDEADRL 252
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 107/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFA
Sbjct: 20 KEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|357505249|ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
Length = 1155
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL L L+ C+ +G KTP EIQ IP L +D IG AKTGSGKT AFALPI
Sbjct: 725 MKSFKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPI 784
Query: 65 LQKWCE--DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
L E P FA V++PTRELA QI +QF LG + ++ +++ GG+DMV Q ++A
Sbjct: 785 LHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIA 844
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K PHI++ TPGR+ DHL FSL R+K+LVLDEADRL
Sbjct: 845 KLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRL 883
>gi|429327957|gb|AFZ79717.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 457
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 106/158 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL + L C+ +G K+PT IQ IP L +D IG A+TGSGKT AF +PILQ
Sbjct: 41 SFEDLGICSELCNACRELGWKSPTNIQIEAIPPALEGKDVIGLAETGSGKTAAFTIPILQ 100
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ P ++ALVL PTREL QI +QF LG + L V +I GG+DMV Q +L+K+PH
Sbjct: 101 SLLDKPQRLYALVLAPTRELCVQITEQFKALGSSIALDVCMILGGLDMVSQALQLSKRPH 160
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
I++ +PGRLADHL+ FS+ +KFLVLDEADRL M
Sbjct: 161 IIVGSPGRLADHLENTKGFSIETMKFLVLDEADRLLSM 198
>gi|366994708|ref|XP_003677118.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
gi|342302986|emb|CCC70763.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
Length = 502
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF++L L P L++ C+ + PT IQ IP L D IG A+TGSGKT AFA+PIL
Sbjct: 82 ESFSELDLVPELLQACKNLNYTKPTPIQSRSIPPALKGNDIIGLAQTGSGKTAAFAIPIL 141
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
D +A +L PTRELA QI + F LG +M +R + I GGM+M+DQ ++L +KP
Sbjct: 142 NSLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKP 201
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI+IATPGRL DHL+ FSL ++K+LV+DEADRL
Sbjct: 202 HIIIATPGRLMDHLENTKGFSLRKLKYLVMDEADRL 237
>gi|156083170|ref|XP_001609069.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796319|gb|EDO05501.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 433
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 105/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + P L + CQ++G + PT IQ A IPH LN D IG A TGSGKT AF +P+L
Sbjct: 44 TFQSLGVCPELCKACQSMGWQAPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLH 103
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
ED I+ +VL P+REL QI +QF L + L+V +I GG+DMV Q LAK+PH
Sbjct: 104 HLLEDVQRIYCVVLAPSRELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPH 163
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++A+PGRLADH++ FSL+ +K LV+DEADRL
Sbjct: 164 VIVASPGRLADHVENTKGFSLSTVKKLVIDEADRL 198
>gi|325191409|emb|CCA26186.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 463
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 107/159 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F L ++ L ++G P++IQ+ IPH L D IG A+TGSGKT AF +PIL
Sbjct: 29 QTFEQLGVDATLCEAIASLGWSKPSKIQQEAIPHGLAGRDLIGLAETGSGKTGAFVIPIL 88
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q P ++ALVL PTRELAYQI +QF LG + L+ + + GG+DM++Q LA+KP
Sbjct: 89 QSLLRSPQRLYALVLAPTRELAYQISEQFEALGASIGLKCACVVGGIDMMNQQIALARKP 148
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
HI+IATPGRL DHL+ FSL IKFLVLDEADR+ M
Sbjct: 149 HIIIATPGRLVDHLENTKGFSLRTIKFLVLDEADRMLSM 187
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LAKKP
Sbjct: 84 NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKP 143
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 106/159 (66%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFAL
Sbjct: 23 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 82
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LA
Sbjct: 83 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 142
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 143 KKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 181
>gi|296210932|ref|XP_002752173.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Callithrix jacchus]
Length = 406
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LAKKP
Sbjct: 84 NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKP 143
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|71005634|ref|XP_757483.1| hypothetical protein UM01336.1 [Ustilago maydis 521]
gi|74703797|sp|Q4PEX7.1|DBP8_USTMA RecName: Full=ATP-dependent RNA helicase DBP8
gi|46096966|gb|EAK82199.1| hypothetical protein UM01336.1 [Ustilago maydis 521]
Length = 602
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 87/166 (52%), Positives = 113/166 (68%), Gaps = 7/166 (4%)
Query: 3 DPIK--SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
DP K SF+ + ++P LIR ++ +K PT IQ IP VL D +G A+TGSGKTL F
Sbjct: 104 DPPKHTSFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCF 163
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGK--VMNLRVSIITGGMDMVDQG 118
ALPIL K +D G FA+VLTPTREL Q+ +QF+ +G+ M LR +++ GGMDM+ Q
Sbjct: 164 ALPILNKLIKDMVGGFAVVLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQA 223
Query: 119 KELAK-KPHIVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL 161
ELA +PH+++ATPGRL DHL + + L R KFLVLDEADRL
Sbjct: 224 SELANLRPHVIVATPGRLVDHLRSGGGEEWGLRRCKFLVLDEADRL 269
>gi|426225488|ref|XP_004006898.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Ovis aries]
Length = 408
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 106/159 (66%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFAL
Sbjct: 23 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 82
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LA
Sbjct: 83 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 142
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPH+VIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 143 KKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 181
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
E P +FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LAKKP
Sbjct: 84 NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSLALAKKP 143
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 144 HIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|291392612|ref|XP_002712706.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
[Oryctolagus cuniculus]
Length = 406
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL + L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
E P +FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LAKKP
Sbjct: 84 NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSLALAKKP 143
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HIVIATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 144 HIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+IQ IP L D IG A+TG GKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGPGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|440803375|gb|ELR24281.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 335
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
Query: 3 DPIK--SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+P+K +F DL + P + C +G P+EIQK IP + +D IG A+TGSGKT AF
Sbjct: 84 EPVKDVTFADLGVIPEICDSCTMLGWSKPSEIQKETIPLAIQGKDIIGLAQTGSGKTGAF 143
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
A+PILQ + P +FA+VL+PTRELA QI +QF LG V+ R +I GG+D+++Q
Sbjct: 144 AIPILQALLQKPQPLFAVVLSPTRELAIQIAEQFEALGSVIRARSVVIVGGVDVMEQSIA 203
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPHI+ ATPGRL HL FSL +K+LVLDEADRL
Sbjct: 204 LAKKPHIICATPGRLLFHLQNTKGFSLKSLKYLVLDEADRL 244
>gi|68473005|ref|XP_719308.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|46441121|gb|EAL00420.1| hypothetical protein CaO19.7546 [Candida albicans SC5314]
gi|238880344|gb|EEQ43982.1| ATP-dependent rRNA helicase RRP3 [Candida albicans WO-1]
Length = 399
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Query: 29 PTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK-W-CEDPYGIFALVLTPTREL 86
PT IQ IPH L +D IG A+TGSGKT AFA+PILQ W + PY FALVL PTREL
Sbjct: 6 PTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPY--FALVLAPTREL 63
Query: 87 AYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFS 146
A+QI D F LG M LR S I GGMDM+DQ ++L +KPH+++ATPGR+ DHL+ FS
Sbjct: 64 AFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFS 123
Query: 147 LNRIKFLVLDEADRL 161
L +K+LV+DEADRL
Sbjct: 124 LKNLKYLVMDEADRL 138
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F++L L P LI+ C+ + PT IQ IP L D IG A+TGSGKT AFA+PIL
Sbjct: 84 ETFSELNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAFAIPIL 143
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
D +A +L PTRELA QI + F LG +M +R I GGM+M+DQ ++L +KP
Sbjct: 144 NSLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQARDLMRKP 203
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H++IATPGRL DHL+ FSL ++K+LV+DEADRL
Sbjct: 204 HVIIATPGRLMDHLENTKGFSLRKLKYLVMDEADRL 239
>gi|242050992|ref|XP_002463240.1| hypothetical protein SORBIDRAFT_02g040380 [Sorghum bicolor]
gi|241926617|gb|EER99761.1| hypothetical protein SORBIDRAFT_02g040380 [Sorghum bicolor]
Length = 502
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL L+ WL+ C +G++ PT +Q+ IP L ED +G A+TGSGKT AFALPIL
Sbjct: 77 TFADLGLSQWLVDACDALGMRRPTAVQRRCIPRALAGEDVLGIAETGSGKTAAFALPILH 136
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ EDPYG+ AL L PTRELA Q+ +QF LG + LR GG D + Q K L+++PH
Sbjct: 137 RLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLAQAKGLSRRPH 196
Query: 127 IVIATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGR+A D D F+ R KFLVLDEADR+
Sbjct: 197 VVVATPGRIATLVKDDPDLAKVFA--RTKFLVLDEADRV 233
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 99/156 (63%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L L C +G K PT IQ IP L D IG A+TGSGKT +F LPIL
Sbjct: 72 KTFKELGLIDSLCEACDKMGYKAPTPIQSESIPLALQGRDIIGLAETGSGKTASFVLPIL 131
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LV+ PTRELAYQI LG +N+R + + GGMDMV Q L KKP
Sbjct: 132 QALMEKPQPFFGLVMAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGKKP 191
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 192 HIIVATPGRLLDHLENTKGFSLRNLKFLVMDEADRL 227
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 108/164 (65%), Gaps = 4/164 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +K+F +L + L+ C +G K PT+IQ IPH L +D IG A+TGSGKT AFA
Sbjct: 5 KEEVKTFKELGVCDQLVTACDNLGWKNPTKIQIESIPHALEGKDLIGLAQTGSGKTGAFA 64
Query: 62 LPILQKWCEDP----YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
LPILQ E FA VL+PTRELA QI +QF LG + ++ +++ GG+DMV Q
Sbjct: 65 LPILQSLLEASEKSVQAFFACVLSPTRELAIQIAEQFEALGSDIGVKCAVLVGGVDMVQQ 124
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L K+PHIV+ATPGRL DHL FSL +K+LVLDEADRL
Sbjct: 125 SIALGKRPHIVVATPGRLVDHLSNTKGFSLRTLKYLVLDEADRL 168
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+I IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKILIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|300120679|emb|CBK20233.2| unnamed protein product [Blastocystis hominis]
Length = 536
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL LN W+++ ++ + PT +QK IP VL ++ G ++TGSGKT FALPILQ
Sbjct: 49 TFADLGLNEWVVKCVNSMQITRPTPVQKYCIPEVLAGKNVTGVSETGSGKTAVFALPILQ 108
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DPYGIFA+VLTPTRELA QI DQ G +++R ++I GG V Q + L K+PH
Sbjct: 109 RLSTDPYGIFAVVLTPTRELAIQIDDQMQAFGAPIHVRTTLIIGGQSFVKQAEALRKRPH 168
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLK 168
+VIATPGR HL T + R+ F+VLDE DR+ L SLK
Sbjct: 169 VVIATPGRFLQHLKTADPPVTKRLGFIVLDECDRM-LSDSLK 209
>gi|307110624|gb|EFN58860.1| hypothetical protein CHLNCDRAFT_48551 [Chlorella variabilis]
Length = 407
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 100/138 (72%), Gaps = 2/138 (1%)
Query: 26 VKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRE 85
++ PT++Q+ IP VL + IG A TGSGKT AFALPILQK ++P+G+FALVLTPTRE
Sbjct: 1 MREPTQVQRGTIPAVLAGRNVIGVAHTGSGKTAAFALPILQKLAKNPFGVFALVLTPTRE 60
Query: 86 LAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLAD--HLDTCN 143
LA+Q+ DQF LG M+L+ ++ GG+DM Q KELA++PH+VIATPGRL LD
Sbjct: 61 LAFQLADQFRALGTGMSLKDCVVVGGLDMTAQAKELARRPHVVIATPGRLRGLLQLDGEL 120
Query: 144 TFSLNRIKFLVLDEADRL 161
R +FLVLDEADRL
Sbjct: 121 ARVFGRARFLVLDEADRL 138
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 102/145 (70%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C + KTP++IQ +P L +D IG A+TGSGKT AFALPILQ E P +F
Sbjct: 10 LCEACDKLKWKTPSKIQTEALPVALQGKDVIGLAETGSGKTGAFALPILQALLETPQRLF 69
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
ALVLTPTRELAYQI +QF LG + + +I GG+DM+ Q +LAKKPH++IATPGRL
Sbjct: 70 ALVLTPTRELAYQIAEQFEALGSTIGVSCVVIVGGIDMMTQALQLAKKPHVMIATPGRLV 129
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ F+L +K+LV+DEADR+
Sbjct: 130 DHLENTKGFNLRGLKYLVMDEADRI 154
>gi|109095726|ref|XP_001086008.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Macaca mulatta]
Length = 406
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ K+F DL + L C +G PT+I IP L D IG A+TGSGKT AFA
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKILIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL E P +FALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKPHI+IATPGRL DHL+ F+L +K+LV+DEADR+
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRI 179
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L C+++G K PT IQ IP L D IG A+TGSGKT AF LPILQ
Sbjct: 52 TFKELGIIDSLCEACESLGYKAPTPIQAEAIPLALQGRDLIGLAETGSGKTAAFVLPILQ 111
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ P + +L+L PTRELAYQI + LG ++ +R +++ GGMDM+ Q L KKPH
Sbjct: 112 ALMDKPQQLHSLILAPTRELAYQISEAVEALGSLIAVRCAVLVGGMDMITQAIALGKKPH 171
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DHL+ FSL ++K+LV+DEADRL
Sbjct: 172 VIVATPGRLLDHLENTKGFSLRQLKYLVMDEADRL 206
>gi|66357446|ref|XP_625901.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226956|gb|EAK87922.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
Length = 446
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 108/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+++G KTPTEIQK IP L D IG A+TGSGKT +F +PILQ
Sbjct: 34 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 93
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +D ++A++L PTREL QI +QF G +++L+++ + GG+DMV Q LAKKPH
Sbjct: 94 RLLDDQVPMYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLAKKPH 153
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++A+PGRL DHL+ F++ IKFLV+DEADRL
Sbjct: 154 IIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRL 188
>gi|323445758|gb|EGB02213.1| hypothetical protein AURANDRAFT_35455 [Aureococcus anophagefferens]
Length = 282
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL L PW++ C +G+ P+ IQ+ IP L + +G A+TGSGKT AFALPIL
Sbjct: 44 FADLGLAPWVVASCGALGMAVPSAIQRGAIPATLRGDHVLGVAETGSGKTAAFALPILDA 103
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK-KPH 126
DP+G+FAL + P+RELA Q+ DQF V G +RV+ +TGG+D V QG ELA +PH
Sbjct: 104 LFRDPFGVFALCVAPSRELAAQLADQFAVFGARQRVRVACVTGGVDGVAQGLELASGRPH 163
Query: 127 IVIATPGRLADHLDTCNTFSLNR-IKFLVLDEADRL 161
+V+ TPGRLA+ + C + R FLVLDEADRL
Sbjct: 164 VVVGTPGRLAEVCERCEVAATLRCAAFLVLDEADRL 199
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ K+F DL L+ L+ C+ +G K P +IQ IP L +D IG A+TGSGKT AFAL
Sbjct: 6 EETKTFKDLGLSESLVEACEKLGWKNPLKIQTEAIPLALEGKDVIGLAQTGSGKTGAFAL 65
Query: 63 PILQKWCEDPY--GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
PIL E P FA VL+PTRELA QI +QF LG + ++ +++ GG+DMV Q +
Sbjct: 66 PILHALLEAPRPKDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 125
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+AK+PHI++ TPGR+ DHL FSL+R+K+LVLDEADRL
Sbjct: 126 IAKQPHIIVGTPGRVIDHLKHTKGFSLSRLKYLVLDEADRL 166
>gi|66814184|ref|XP_641271.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
gi|74897202|sp|Q54VT4.1|DDX47_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx47; AltName:
Full=DEAD box protein 47
gi|60469306|gb|EAL67300.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
Length = 546
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L ++P +I C +G P EIQ+ IP L D IG A+TGSGKT AF +P+LQ
Sbjct: 120 TFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQ 179
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E P G+F L L PTRELAYQI DQF +G + ++ ++ GG+D + Q LAKKPH
Sbjct: 180 KLLEAPQGLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLALAKKPH 239
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ +PGR+ HL+ F+L IK+ ++DEADRL
Sbjct: 240 VVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRL 274
>gi|67624705|ref|XP_668635.1| DEAD box protein [Cryptosporidium hominis TU502]
gi|54659844|gb|EAL38406.1| DEAD box protein [Cryptosporidium hominis]
Length = 441
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 108/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+++G KTPTEIQK IP L D IG A+TGSGKT +F +PILQ
Sbjct: 29 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 88
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +D ++A++L PTREL QI +QF G +++L+++ + GG+DMV Q LAKKPH
Sbjct: 89 RLLDDQVPMYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLAKKPH 148
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++A+PGRL DHL+ F++ IKFLV+DEADRL
Sbjct: 149 IIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRL 183
>gi|323445520|gb|EGB02089.1| hypothetical protein AURANDRAFT_8983 [Aureococcus anophagefferens]
Length = 379
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL L PW++ C +G+ P+ IQ+ IP L + +G A+TGSGKT AFALPIL
Sbjct: 1 FADLGLAPWVVASCGALGMAVPSAIQRGAIPATLRGDHVLGVAETGSGKTAAFALPILDA 60
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK-KPH 126
DP+G+FAL + P+RELA Q+ DQF V G +RV+ +TGG+D V QG ELA +PH
Sbjct: 61 LFRDPFGVFALCVAPSRELAAQLADQFAVFGARQRVRVACVTGGVDGVAQGLELASGRPH 120
Query: 127 IVIATPGRLADHLDTCNTFSLNR-IKFLVLDEADRL 161
+V+ TPGRLA+ + C + R FLVLDEADRL
Sbjct: 121 VVVGTPGRLAEVCERCEVAATLRCAAFLVLDEADRL 156
>gi|145342427|ref|XP_001416184.1| Ddx49-related DEAD box helicase superfamily II protein
[Ostreococcus lucimarinus CCE9901]
gi|144576409|gb|ABO94477.1| Ddx49-related DEAD box helicase superfamily II protein
[Ostreococcus lucimarinus CCE9901]
Length = 417
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ SF L L+ L+R + +G P+ +QK+ IP +L D IG A TGSGKT AFALP+
Sbjct: 1 MTSFDKLGLSGVLLRNIRQLGFTEPSSVQKSCIPPILQGRDVIGIANTGSGKTAAFALPV 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ DP+G+FAL L+PTRELAYQI +QF V M+LR ++ GG D++ Q L+K+
Sbjct: 61 VHVLSVDPHGVFALCLSPTRELAYQIAEQFAVFSVGMSLRCEVVIGGEDLLRQASSLSKR 120
Query: 125 PHIVIATPGRLADHL----DTCNTFSLNRIKFLVLDEADRL 161
PHIV+ATPGRL +H DT F R+KFL+LDEADRL
Sbjct: 121 PHIVVATPGRLLEHFMHSSDTIECF--QRLKFLILDEADRL 159
>gi|323508819|dbj|BAJ77303.1| cgd4_3180 [Cryptosporidium parvum]
gi|323510507|dbj|BAJ78147.1| cgd4_3180 [Cryptosporidium parvum]
Length = 441
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 108/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+++G KTPTEIQK IP L D IG A+TGSGKT +F +PILQ
Sbjct: 29 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 88
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +D ++A++L PTREL QI +QF G +++L+++ + GG+DMV Q LAKKPH
Sbjct: 89 RLLDDQVPMYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLAKKPH 148
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++A+PGRL DHL+ F++ IKFLV+DEADRL
Sbjct: 149 IIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRL 183
>gi|125559280|gb|EAZ04816.1| hypothetical protein OsI_26993 [Oryza sativa Indica Group]
Length = 501
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ WL+ C ++G++ PT +Q+ IP L D +G A+TGSGKT AFALPIL
Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILH 137
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ EDPYG+ AL L PTRELA Q+ +QF LG + LR GG D + Q K LA++PH
Sbjct: 138 RLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPH 197
Query: 127 IVIATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGR+A D D F+ R KFLVLDEADR+
Sbjct: 198 VVVATPGRIATLINDDPDLAKVFA--RTKFLVLDEADRV 234
>gi|409050331|gb|EKM59808.1| hypothetical protein PHACADRAFT_181770 [Phanerochaete carnosa
HHB-10118-sp]
Length = 436
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
Query: 45 DCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLR 104
DCIG AKTGSGKT+AFALPI+ + DPYGIFAL+LTPTRELA+QI +QF VLG N+R
Sbjct: 9 DCIGNAKTGSGKTIAFALPIIHRLSVDPYGIFALILTPTRELAFQISEQFAVLGAAFNIR 68
Query: 105 VSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCN-TFSLNRIKFLVLDEADRLSL 163
+++ GGMD++ Q EL+ +PHIV+ATPGR+ D L + N + L+R+KFLVLDEADRL
Sbjct: 69 TAVVVGGMDIISQAIELSNRPHIVVATPGRIVDLLRSNNGEWDLSRVKFLVLDEADRLLT 128
Query: 164 MTSLKFFFFFF 174
T + F
Sbjct: 129 STFAPELSYLF 139
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 102/155 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C +G K PT+IQ +P L D IG A+TGSGKT FALPILQ
Sbjct: 20 TFRSLGVCEQLAEACDALGWKAPTQIQVDAVPVALKGHDIIGLAQTGSGKTATFALPILQ 79
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+P +FA VL+PTRELA QI +QF LG + L+ +++ GG+DM+ Q LAK+PH
Sbjct: 80 ALLENPQPLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGIDMMAQSVALAKRPH 139
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ TPGRL DHL FSL IK+LVLDEADRL
Sbjct: 140 VVVGTPGRLVDHLTNTKGFSLRTIKYLVLDEADRL 174
>gi|115473551|ref|NP_001060374.1| Os07g0633500 [Oryza sativa Japonica Group]
gi|75329662|sp|Q8L4E9.1|RH36_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|22093824|dbj|BAC07111.1| DEAD box protein-like [Oryza sativa Japonica Group]
gi|22296386|dbj|BAC10155.1| DEAD box protein-like [Oryza sativa Japonica Group]
gi|113611910|dbj|BAF22288.1| Os07g0633500 [Oryza sativa Japonica Group]
gi|125601204|gb|EAZ40780.1| hypothetical protein OsJ_25257 [Oryza sativa Japonica Group]
Length = 501
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ WL+ C ++G++ PT +Q+ IP L D +G A+TGSGKT AFALPIL
Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILH 137
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ EDPYG+ AL L PTRELA Q+ +QF LG + LR GG D + Q K LA++PH
Sbjct: 138 RLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPH 197
Query: 127 IVIATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGR+A D D F+ R KFLVLDEADR+
Sbjct: 198 VVVATPGRIATLINDDPDLAKVFA--RTKFLVLDEADRV 234
>gi|323445790|gb|EGB02228.1| hypothetical protein AURANDRAFT_18038 [Aureococcus anophagefferens]
Length = 169
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL L PW++ C +G+ P+ IQ+ IP L + +G A+TGSGKT AFALPIL
Sbjct: 2 FADLGLAPWVVASCGALGMAVPSAIQRGAIPATLRGDHVLGVAETGSGKTAAFALPILDA 61
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK-KPH 126
DP+G+FAL + P+RELA Q+ DQF V G +RV+ +TGG+D V QG ELA +PH
Sbjct: 62 LFRDPFGVFALCVAPSRELAAQLADQFAVFGARQRVRVACVTGGVDGVAQGLELASGRPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNR-IKFLVLDEADRL 161
+V+ TPGRLA+ + C + R FLVLDEADRL
Sbjct: 122 VVVGTPGRLAEVCERCEVAATLRCAAFLVLDEADRL 157
>gi|343427218|emb|CBQ70746.1| related to DBP8-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 531
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 113/166 (68%), Gaps = 7/166 (4%)
Query: 3 DPIK--SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
DP K SF+ + ++P LIR ++ +K PT IQ IP VL D +G A+TGSGKTL F
Sbjct: 31 DPPKHTSFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCF 90
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGK--VMNLRVSIITGGMDMVDQG 118
ALPIL K +D G FA+VLTPTREL Q+ +QF+ +G+ M LR +++ GGMDM+ Q
Sbjct: 91 ALPILNKLIKDMVGGFAVVLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQA 150
Query: 119 KELAK-KPHIVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL 161
ELA +PH+++ATPGRL DHL + + L R KFLVLDEADRL
Sbjct: 151 SELANLRPHVIVATPGRLVDHLRSGGGEEWGLRRCKFLVLDEADRL 196
>gi|393216171|gb|EJD01662.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 218
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 98/131 (74%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I SF DL + L+ ++ +++PTE+Q IP +L D DC+G +TGSGKT+AFALP+
Sbjct: 85 IASFADLGASKALVASLASMSIRSPTEVQVVCIPPLLADMDCVGNVQTGSGKTIAFALPV 144
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK DPYGI+ALVLTPTRELA+QI +QF VLG +N++ +II GGMDM+ Q EL +
Sbjct: 145 LQKLSLDPYGIYALVLTPTRELAFQISEQFAVLGAPLNIQTAIIVGGMDMITQALELNNR 204
Query: 125 PHIVIATPGRL 135
PH+V+ATPGR+
Sbjct: 205 PHVVVATPGRI 215
>gi|388851950|emb|CCF54306.1| related to DBP8-ATP-dependent RNA helicase [Ustilago hordei]
Length = 532
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 114/166 (68%), Gaps = 6/166 (3%)
Query: 2 EDPIK-SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
E PI SF+ + ++P LIR ++ +K PT IQ IP VL D +G A+TGSGKTL F
Sbjct: 34 EPPIHASFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCF 93
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGK--VMNLRVSIITGGMDMVDQG 118
ALPIL + +D G FA+VLTPTREL Q+ +QF+ LG+ M LR +++ GGMDM+ Q
Sbjct: 94 ALPILNRLLKDMVGGFAVVLTPTRELGVQLHEQFVALGEGARMGLRCALVLGGMDMMKQA 153
Query: 119 KELAK-KPHIVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL 161
ELA +PH+++ATPGRL DHL + ++L R +FLVLDEADRL
Sbjct: 154 SELANMRPHVIVATPGRLVDHLRSGGGEEWALRRCRFLVLDEADRL 199
>gi|50305787|ref|XP_452854.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660562|sp|Q6CT85.1|RRP3_KLULA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49641987|emb|CAH01705.1| KLLA0C14608p [Kluyveromyces lactis]
Length = 487
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 102/153 (66%)
Query: 9 TDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKW 68
T+L L P LI C+ + PT IQ IP L D IG A+TGSGKT AFA+PIL +
Sbjct: 70 TELDLVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQL 129
Query: 69 CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIV 128
D +A +L PTRELA QI + F LG +M +R + I GGM M+DQ ++L +KPHI+
Sbjct: 130 WHDQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPHII 189
Query: 129 IATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IATPGRL DHL+ F+L ++K+LV+DEADRL
Sbjct: 190 IATPGRLMDHLENTKGFNLRKLKYLVMDEADRL 222
>gi|414887756|tpg|DAA63770.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 417
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL L+ WL+ C+ +G++ PT +Q+ IP L D +G A+TGSGKT AFALPIL +
Sbjct: 72 FADLGLSQWLVDACEALGMRRPTAVQRRCIPRALAGADVLGIAETGSGKTAAFALPILHR 131
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
EDPYG+ AL L PTRELA Q+ +QF LG + LR GG D + Q K L+++PH+
Sbjct: 132 LGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLAQAKGLSRRPHV 191
Query: 128 VIATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
V+ATPGR+A + D FS R KFLVLDEADR+
Sbjct: 192 VVATPGRIATLVKNDPDLAKVFS--RTKFLVLDEADRI 227
>gi|326911793|ref|XP_003202240.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Meleagris gallopavo]
Length = 447
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 105/159 (66%), Gaps = 5/159 (3%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D + TD+ L C +G K PT+IQ IP L D IG A+TGSGKT AFAL
Sbjct: 21 DYVAGVTDV-----LCEACDQLGWKIPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFAL 75
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ + P +FALVLTPTRELA+QI +QF LG + + ++I GG+D + Q LA
Sbjct: 76 PILQALLDAPQRLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALA 135
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHI+IATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 136 KKPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRI 174
>gi|84994532|ref|XP_951988.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
gi|65302149|emb|CAI74256.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 455
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 108/155 (69%), Gaps = 2/155 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + L R C+ +G KTPT+IQ IP L+ +D IG A+TGSGKT AF +PILQ
Sbjct: 42 TFEDLGVCVELCRACKELGWKTPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQ 101
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E P +F+L+L PTREL+ QI +Q + L + L V +I GG+DMV Q +L+KKPH
Sbjct: 102 KLLEKPQRLFSLILAPTRELSLQIKEQLISLE--IGLDVCLILGGLDMVSQALQLSKKPH 159
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ +PGR+ADHL FSL IK+LVLDEAD+L
Sbjct: 160 IIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKL 194
>gi|357121637|ref|XP_003562524.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 447
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 103/155 (66%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L+ C ++G K PT+IQ IPH L D IG +TGSGKT AFALPI+Q
Sbjct: 19 TFAELGICKELVDACDSMGWKEPTKIQAGAIPHALQGRDLIGLGQTGSGKTGAFALPIIQ 78
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E FA V++PTRELA QI +QF LG + L S++ GG+D + Q +AK+PH
Sbjct: 79 ALLEHRQPFFACVMSPTRELAIQIAEQFEALGSAIGLVCSVLVGGVDRMQQVLSIAKRPH 138
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ TPGRL DHL FSLN++K+LVLDEAD+L
Sbjct: 139 IVVGTPGRLLDHLKDTKGFSLNKVKYLVLDEADKL 173
>gi|209877961|ref|XP_002140422.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556028|gb|EEA06073.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 442
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 108/155 (69%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C+++G PT+IQ+ IP L D IG A+TGSGKT AF LPILQ
Sbjct: 30 TFASLGVCKELCLACESLGWLKPTDIQREAIPIALRGGDIIGLAETGSGKTGAFILPILQ 89
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E+ ++++VL PTREL QI +QF LG +++L+V+ I GGMDMV+Q LAKKPH
Sbjct: 90 SLLENQSRMYSVVLAPTRELCVQISEQFSALGSLISLQVANIVGGMDMVNQALSLAKKPH 149
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++A+PGRL DHL+ F+++ +K+LV+DEADRL
Sbjct: 150 IIVASPGRLVDHLENTKGFNISSVKYLVMDEADRL 184
>gi|393245773|gb|EJD53283.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 463
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 104/160 (65%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ SF +L L L+ + PTEIQ A +PH L D IG A+TGSGKT AFA
Sbjct: 21 EETRPSFKELGLIEPLLEALDKLSFARPTEIQAAALPHALAGHDIIGVAETGSGKTAAFA 80
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQK EDP +FA + PTRELA+QI F LG + +RV++I GG+ ++Q L
Sbjct: 81 LPILQKLWEDPRPLFACCIAPTRELAFQIAQSFEALGGSLGVRVAVIIGGVKEIEQQIAL 140
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PHI++A PGRL HL+ FSL +K+LVLDEADRL
Sbjct: 141 SKRPHIIVAAPGRLNWHLENTKGFSLRTLKYLVLDEADRL 180
>gi|330794252|ref|XP_003285194.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
gi|325084915|gb|EGC38333.1| hypothetical protein DICPUDRAFT_7134 [Dictyostelium purpureum]
Length = 434
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 102/155 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L ++P +I C G K P EIQ+ IP L D IG A+TGSGKT AF +P+LQ
Sbjct: 11 TFESLGVHPQIIDACYRSGFKKPKEIQRETIPWALKGRDIIGLAQTGSGKTGAFVIPVLQ 70
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K E P GIF L + PTRELA+QI +QF LG + ++ ++ GG+D + Q +LAKKPH
Sbjct: 71 KLLEQPQGIFCLCIAPTRELAFQIAEQFNALGATIGVKTCVLVGGIDSMTQSLQLAKKPH 130
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+I +PGR+ HL+ F+L IK+ ++DEADRL
Sbjct: 131 IIIGSPGRIIFHLENTKGFNLRSIKYFIMDEADRL 165
>gi|342184627|emb|CCC94109.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 530
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 107/162 (66%), Gaps = 6/162 (3%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L + WL +QC +G+ PT IQK IP +L D+ +G A TGSGKT AFALP+
Sbjct: 1 MSEFEALGIQQWLSKQCAYMGLHQPTPIQKLCIPAILADKCVVGGAATGSGKTAAFALPV 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYG+FALVLTP+RELAYQI DQF+ G ++R +++ GG+ Q L +
Sbjct: 61 LQKLAEDPYGVFALVLTPSRELAYQILDQFVAFGAPFHVRAALLIGGVPHEQQLSVLQGR 120
Query: 125 PHIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRLS 162
PHIV+ATPGR LA + FS ++FL+LDEADRL+
Sbjct: 121 PHIVVATPGRLKFLLAHFTEASKAFS--HLRFLILDEADRLT 160
>gi|449666070|ref|XP_002163050.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Hydra magnipapillata]
Length = 431
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 103/145 (71%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C +G PT+IQ+ IP L +D IG A+TGSGKT AFALP+LQ ++P ++
Sbjct: 6 LCESCLRLGWTHPTKIQREAIPLALEGKDIIGLAETGSGKTGAFALPVLQTLLDNPQRLY 65
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
ALV+TPTRELA+QI +QF LG + ++ ++I GG+D++ Q L KKPHIVIATPGRL
Sbjct: 66 ALVITPTRELAFQISEQFEALGSSIGIKCAVIVGGVDLMTQSLALTKKPHIVIATPGRLV 125
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ FSL +K+L++DEADR+
Sbjct: 126 DHLENTKGFSLRSLKYLIMDEADRI 150
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 108/161 (67%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ +KSF DL L L+ C +G KTP +IQ IP L +D IG A+TGSGKT AFAL
Sbjct: 6 NEMKSFKDLGLPEELVEACDNLGWKTPLKIQIEAIPLALQGKDVIGLAQTGSGKTGAFAL 65
Query: 63 PILQKWCEDPY--GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
PIL + P FA VL+PTRELA QI +QF LG + ++ +++ GG+DMV Q +
Sbjct: 66 PILHALLQAPRPNHFFACVLSPTRELAIQISEQFEALGSGIGVKSAVLVGGIDMVQQSIK 125
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+AK PHI++ TPGR+ DHL FSL+++K+LVLDEADRL
Sbjct: 126 IAKHPHIIVGTPGRVLDHLKNTKGFSLSKLKYLVLDEADRL 166
>gi|224089124|ref|XP_002308641.1| predicted protein [Populus trichocarpa]
gi|222854617|gb|EEE92164.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+ +K+F DL + L+ C+ +G K PT+IQ IPH L +D I A+TGSGKT AFA
Sbjct: 6 EEAVKTFADLGICEQLVEACERLGWKNPTKIQVEAIPHALEGKDLIALAQTGSGKTAAFA 65
Query: 62 LPILQKWCEDPYG----IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
LP LQ + +A VL+PTRELA QI +QF LG + LR +++ GG+DM Q
Sbjct: 66 LPTLQALLQASVTSVPVFYACVLSPTRELAIQIAEQFEALGSDIGLRCAVLVGGVDMGLQ 125
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PHIV+ TPGRL DHL FSL +K+L+LDEADRL
Sbjct: 126 TIALAKRPHIVVGTPGRLLDHLSNTKGFSLRTLKYLILDEADRL 169
>gi|384252067|gb|EIE25544.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 415
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED IK F L + L ++G K PT IQ+ +PH+L D IG A+TGSGKT AFA
Sbjct: 10 EDAIKLFEKLGVCRQLAEAAASLGWKVPTSIQEQAVPHLL--ADVIGLAQTGSGKTGAFA 67
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PILQ+ + P FALVL+PTRELA QI +QF LG + +R +++ GG+DM+ Q L
Sbjct: 68 MPILQELLDTPQANFALVLSPTRELALQIAEQFEALGAGIGVRCAVLVGGIDMMAQAIAL 127
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PHI++ TPGR+ DHL F+L ++ LVLDEADRL
Sbjct: 128 GKRPHIIVGTPGRVVDHLSNTKGFTLKALRHLVLDEADRL 167
>gi|302822183|ref|XP_002992751.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
gi|300139492|gb|EFJ06232.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
Length = 733
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 81/157 (51%), Positives = 100/157 (63%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ SF +L + L+ C +G K PT IQ +P L D IG A+TGSGKT AFALPI
Sbjct: 173 VPSFGELGVREELVDACTKLGWKAPTPIQVEALPLALQGRDLIGLAQTGSGKTAAFALPI 232
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + + FA VL+PTRELA QI +QF LG + +R I GG+ MVDQ L K
Sbjct: 233 LQALFQQCHPFFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQAVALGKN 292
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ATPGRL DHL FSL +K+LVLDEAD++
Sbjct: 293 PHIVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKI 329
>gi|357500171|ref|XP_003620374.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495389|gb|AES76592.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 431
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 106/159 (66%), Gaps = 2/159 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL L L+ C+ +G K P +IQ IP L +D IG A+TGSGKT AFALPI
Sbjct: 1 MKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPI 60
Query: 65 LQKWCEDPY--GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
L E P FA V++PTRELA QI +QF LG + ++ +++ GG+DMV Q ++A
Sbjct: 61 LHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIA 120
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K PHI++ TPGR+ DHL FSL R+K+LVLDEADRL
Sbjct: 121 KLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRL 159
>gi|357116154|ref|XP_003559848.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like
[Brachypodium distachyon]
Length = 449
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 102/155 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L+ C +G K PT+IQ IPH L D IG +TGSGKT AFALPI+Q
Sbjct: 19 TFAELGICRELVDACDAMGWKEPTKIQAGAIPHALQGRDLIGLGQTGSGKTGAFALPIIQ 78
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E FA V++PTRELA QI +QF LG + L S++ GG+D + Q +AK+PH
Sbjct: 79 ALLEHRRPFFACVMSPTRELAIQIAEQFEALGSAIGLVCSVLVGGVDRMQQVLSIAKRPH 138
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ TPGRL DHL FSLN++K+LVLDEAD+L
Sbjct: 139 IVVGTPGRLLDHLKDTKGFSLNKVKYLVLDEADKL 173
>gi|294892431|ref|XP_002774060.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239879264|gb|EER05876.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 299
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 110/158 (69%), Gaps = 2/158 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL L+ W++ C ++ + PT IQ+ IP +L+ ++ +G +KTGSGKT AFALPIL
Sbjct: 10 KTFKDLGLSQWVVDVCGSLEITKPTSIQRLAIPAILDGKNIVGASKTGSGKTAAFALPIL 69
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ +DP+G+FA+VLTP RELA QI +QF L K ++ R+S I GG ++ Q + + +P
Sbjct: 70 QRLSKDPFGVFAVVLTPVRELAVQITEQFEALSKPIDGRISCIVGGTSLLPQIQAIHDRP 129
Query: 126 HIVIATPGRLADHL--DTCNTFSLNRIKFLVLDEADRL 161
HIV+ATPGRLA+ L D + +FLVLDEADRL
Sbjct: 130 HIVVATPGRLAEILNGDASLVEAFAHTEFLVLDEADRL 167
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 106/159 (66%), Gaps = 2/159 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL L L+ C+ +G K P +IQ IP L +D IG A+TGSGKT AFALPI
Sbjct: 72 MKSFKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPI 131
Query: 65 LQKWCEDPY--GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
L E P FA V++PTRELA QI +QF LG + ++ +++ GG+DMV Q ++A
Sbjct: 132 LHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDMVQQSVKIA 191
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K PHI++ TPGR+ DHL FSL R+K+LVLDEADRL
Sbjct: 192 KLPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRL 230
>gi|300175700|emb|CBK21243.2| unnamed protein product [Blastocystis hominis]
Length = 485
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDE---DCIGCAKTGSGKTLAFAL 62
K+F+D + L + +G K P+ IQ+ ++ L ++ D I A+TGSGKT AFA+
Sbjct: 52 KTFSDYGVCDTLCQAIDNLGWKHPSSIQRDVLKIALQEDQNKDIIAIAETGSGKTGAFAI 111
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PI+Q+ ++P ++AL++TPTRELA+QI +QF LG + L+ ++I GG+DMV Q LA
Sbjct: 112 PIIQRLIDNPQRMYALIVTPTRELAFQISEQFEALGSSVGLKTAVIVGGIDMVQQALALA 171
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADR 160
+KPH+V+ TPGRL DHL+ FSLN +K+LVLDEADR
Sbjct: 172 RKPHVVVGTPGRLVDHLENTKGFSLNTMKYLVLDEADR 209
>gi|357121829|ref|XP_003562620.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like
[Brachypodium distachyon]
Length = 500
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 107/156 (68%), Gaps = 6/156 (3%)
Query: 10 DLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWC 69
DL L+ WL+ C ++G++ PT++Q+ IP L E+ +G A+TGSGKT AFALPIL +
Sbjct: 80 DLGLSEWLVDVCSSLGMRRPTDVQRRCIPRALAGENVLGIAETGSGKTAAFALPILHRLG 139
Query: 70 EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVI 129
EDP+G+ ALV+TPTRELA Q+ +QF LG + LR GG D + Q K L+++PH+V+
Sbjct: 140 EDPFGVAALVVTPTRELAAQLAEQFRALGSPLGLRCLAAIGGFDSLAQAKGLSRRPHVVV 199
Query: 130 ATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
ATPGR+A + D F+ R KFLVLDEADR+
Sbjct: 200 ATPGRIATLINNDPDLAKVFA--RTKFLVLDEADRV 233
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L++ + + TPTEIQ IP + D IG A TGSGKTLAF +PIL
Sbjct: 4 KTFAELGICAPLLQALEELKHTTPTEIQTGCIPQAIAGRDIIGIAPTGSGKTLAFVIPIL 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGG-MDMVDQGKELAKK 124
+ ++P G FA VL+PTRELAYQI QF LG M ++ +I GG D V Q LA+K
Sbjct: 64 HRLWDNPQGYFACVLSPTRELAYQISAQFEALGAAMGVQSVVIVGGDDDRVQQAVRLAQK 123
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHI++ATPGRL DHL + FSL +K LVLDEADRL
Sbjct: 124 PHIIVATPGRLHDHLKSTKGFSLRSLKHLVLDEADRL 160
>gi|281349896|gb|EFB25480.1| hypothetical protein PANDA_006406 [Ailuropoda melanoleuca]
Length = 383
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 99/145 (68%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL E P +F
Sbjct: 6 LCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLF 65
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
ALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LAKKPHI+IATPGRL
Sbjct: 66 ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLI 125
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ F+L +K+LV+DEADR+
Sbjct: 126 DHLENTKGFNLRALKYLVMDEADRI 150
>gi|303283774|ref|XP_003061178.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457529|gb|EEH54828.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 456
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 106/157 (67%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+++FT L + L +G K P+EIQ+A IP L +D IG A+TGSGKT AFALPI
Sbjct: 14 VEAFTVLGVCEELATAAADLGWKDPSEIQRASIPQALQGKDVIGLAQTGSGKTGAFALPI 73
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ+ + P FALVL+PTRELA QI +QF LG + ++ +++ GG+DM+ Q +L K+
Sbjct: 74 LQELLDKPQAFFALVLSPTRELAIQISEQFEALGAGIGVKCAVLVGGVDMMAQSIQLGKR 133
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+V+ TPGR+ DHL F L +++ L LDEADRL
Sbjct: 134 PHVVVGTPGRVVDHLTNTKGFGLKQLQVLCLDEADRL 170
>gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]
Length = 414
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 104/164 (63%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ED +++F L + L C IG PT IQ+ IP L D IG A+TGSGKT AF
Sbjct: 29 VEDDVQTFEALGVVKPLCEACAAIGWTKPTGIQQQAIPAALQGRDVIGLAETGSGKTGAF 88
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALP+LQ P +FA+VL PTRELA+QI + F LG + L+ + GG+DM+ Q
Sbjct: 89 ALPVLQALLAKPQRLFAVVLAPTRELAFQIHEVFEALGASIGLKSCCVVGGVDMMTQAIA 148
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
LA+KPH+V+ATPGRL DHL+ F + +FLVLDEADR+ M
Sbjct: 149 LARKPHVVVATPGRLVDHLENTKGFHIREARFLVLDEADRMLSM 192
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 99/145 (68%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL E P +F
Sbjct: 52 LCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLF 111
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
ALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LAKKPHIVIATPGRL
Sbjct: 112 ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLI 171
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ F+L +K+LV+DEADR+
Sbjct: 172 DHLENTKGFNLRALKYLVMDEADRI 196
>gi|242042443|ref|XP_002468616.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
gi|241922470|gb|EER95614.1| hypothetical protein SORBIDRAFT_01g049070 [Sorghum bicolor]
Length = 454
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L+ C +G K PT IQ IPH L +D I A+TGSGKT AFALPILQ
Sbjct: 25 TFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQ 84
Query: 67 KWCED---PYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ + FA VL+PTRELA QI +QF LG + LR S++ GG+D V Q + K
Sbjct: 85 ELLSNRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVDRVQQVLSIGK 144
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+PHIV+ TPGRL DHL FSL +IK+LVLDEAD+L
Sbjct: 145 RPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKL 182
>gi|389600202|ref|XP_001561850.2| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504226|emb|CAM36870.2| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 630
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 79/161 (49%), Positives = 104/161 (64%), Gaps = 3/161 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L + PWL +QC + ++TPT IQ+ IP +L D +G A TGSGKT AFALPI
Sbjct: 1 MAEFQRLGIQPWLSKQCTYMALETPTPIQRKCIPAILADHHVVGGAATGSGKTAAFALPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ+ D YG+FALVLTP+RELAYQI DQF+ G + +R + GG+ Q L +
Sbjct: 61 LQRLAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLQVRTMLSIGGVPTETQVDALKAR 120
Query: 125 PHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRLS 162
PHIV ATPGRL L+T + + +++LVLDEADRL+
Sbjct: 121 PHIVAATPGRLRHLLETFAPEVSKAFAHLRYLVLDEADRLT 161
>gi|212722850|ref|NP_001131651.1| uncharacterized protein LOC100193011 [Zea mays]
gi|194692160|gb|ACF80164.1| unknown [Zea mays]
gi|413934956|gb|AFW69507.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 455
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L+ C +G K PT IQ IPH L +D I A+TGSGKT AFALPILQ
Sbjct: 25 TFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQ 84
Query: 67 KWCED---PYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ + FA VL+PTRELA QI +QF LG + LR S++ GG+D V Q + K
Sbjct: 85 ELLSNRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVDRVQQVLSIGK 144
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+PHIV+ TPGRL DHL FSL +IK+LVLDEAD+L
Sbjct: 145 RPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKL 182
>gi|344243858|gb|EGV99961.1| putative ATP-dependent RNA helicase DDX47 [Cricetulus griseus]
Length = 586
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 99/145 (68%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L C +G PT+IQ IP L D IG A+TGSGKT AFALPIL E P +F
Sbjct: 166 LCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLF 225
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
ALVLTPTRELA+QI +QF LG + ++ ++I GG+D + Q LAKKPHIVIATPGRL
Sbjct: 226 ALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSIALAKKPHIVIATPGRLI 285
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ F+L +K+LV+DEADR+
Sbjct: 286 DHLENTKGFNLRALKYLVMDEADRI 310
>gi|340502092|gb|EGR28809.1| hypothetical protein IMG5_168450 [Ichthyophthirius multifiliis]
Length = 409
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ +L++ C+ I KTPT+IQ+ IP +LN ++ + A+TGSGKT AF+ PILQ
Sbjct: 5 TFKSLNLHSFLLKICEKIEYKTPTKIQQLSIPAILNKKNVVINAETGSGKTAAFSFPILQ 64
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
EDP GIFA+VLT RELA QI +Q + G +NLRVS + GG+D Q EL PH
Sbjct: 65 FLSEDPRGIFAIVLTANRELALQISEQLSIFGSSLNLRVSTLVGGIDFAKQASELELIPH 124
Query: 127 IVIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
I++ TPGR AD L + F + ++FLVLDEADRL
Sbjct: 125 IIVGTPGRTADMLRKSDIFREYVENLEFLVLDEADRL 161
>gi|195621064|gb|ACG32362.1| ATP-dependent RNA helicase DDX47 [Zea mays]
Length = 455
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L+ C +G K PT IQ IPH L +D I A+TGSGKT AFALPILQ
Sbjct: 25 TFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQGKDLIALAQTGSGKTGAFALPILQ 84
Query: 67 KWCED---PYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ + FA VL+PTRELA QI +QF LG + LR S++ GG+D V Q + K
Sbjct: 85 ELLSNRQAEQSFFACVLSPTRELAIQIAEQFEALGSAIGLRCSVLVGGVDRVQQVLSIGK 144
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+PHIV+ TPGRL DHL FSL +IK+LVLDEAD+L
Sbjct: 145 RPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEADKL 182
>gi|440478274|gb|ELQ59116.1| ATP-dependent RNA helicase DBP8 [Magnaporthe oryzae P131]
Length = 596
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 109/179 (60%), Gaps = 20/179 (11%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + VK PT IQK I +L DCIG ++TGSGKT+AFA+
Sbjct: 145 DQNTTFESLGVEPWLVQSLANLAVKRPTGIQKGCIGEILKGRDCIGGSRTGSGKTIAFAV 204
Query: 63 PILQKWCEDPYGIFALVLTPTR-----------------ELAYQIGDQFLVLGKVMNLRV 105
PILQK+ +DP IFA+VLT TR ELA QI +QF + L+
Sbjct: 205 PILQKYAQDPSAIFAVVLTATRQVSYPLLLCTPLDIYRPELALQIYEQFKAVSSPHVLKA 264
Query: 106 SIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++I GG DM Q LA++P IVIATPGRLADH+ + + L R+KFLVLDEADRL
Sbjct: 265 ALIIGGSDMRSQAIALAQRPSIVIATPGRLADHIRSSGEDTICGLRRVKFLVLDEADRL 323
>gi|440473101|gb|ELQ41923.1| ATP-dependent RNA helicase DBP8 [Magnaporthe oryzae Y34]
Length = 682
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 109/179 (60%), Gaps = 20/179 (11%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + VK PT IQK I +L DCIG ++TGSGKT+AFA+
Sbjct: 231 DQNTTFESLGVEPWLVQSLANLAVKRPTGIQKGCIGEILKGRDCIGGSRTGSGKTIAFAV 290
Query: 63 PILQKWCEDPYGIFALVLTPTR-----------------ELAYQIGDQFLVLGKVMNLRV 105
PILQK+ +DP IFA+VLT TR ELA QI +QF + L+
Sbjct: 291 PILQKYAQDPSAIFAVVLTATRQVSYPLLLCTPLDIYRPELALQIYEQFKAVSSPHVLKA 350
Query: 106 SIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
++I GG DM Q LA++P IVIATPGRLADH+ + + L R+KFLVLDEADRL
Sbjct: 351 ALIIGGSDMRSQAIALAQRPSIVIATPGRLADHIRSSGEDTICGLRRVKFLVLDEADRL 409
>gi|302823844|ref|XP_002993570.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
gi|300138582|gb|EFJ05345.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
Length = 434
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 100/157 (63%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ SF +L + L+ C +G K PT IQ +P L D IG A+TGSGKT AFALPI
Sbjct: 7 VPSFGELGVREELVDACTKLGWKAPTPIQVEALPLALQGRDLIGLAQTGSGKTAAFALPI 66
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + + FA VL+PTRELA QI +QF LG + +R I GG+ MVDQ L K
Sbjct: 67 LQALFQQCHPFFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQAVALGKN 126
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHIV+ATPGRL DHL FSL +K+LVLDEAD++
Sbjct: 127 PHIVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKI 163
>gi|443897253|dbj|GAC74594.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 588
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 110/160 (68%), Gaps = 5/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ + ++P LIR ++ +K PT IQ IP VL D +G A+TGSGKTL FALPIL
Sbjct: 97 SFSSIGISPMLIRSLASLQIKVPTPIQSLTIPPVLEGRDLVGGAQTGSGKTLCFALPILN 156
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGK--VMNLRVSIITGGMDMVDQGKELAK- 123
+ +D G FA++LTPTREL Q+ +QF+ +G+ M LR +++ GGMDM+ Q ELA
Sbjct: 157 RLIKDMVGGFAVILTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQASELASM 216
Query: 124 KPHIVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL 161
+PH+++ATPGRL DHL + + L R +FLVLDEADRL
Sbjct: 217 RPHVIVATPGRLVDHLRSGGGEEWGLRRCRFLVLDEADRL 256
>gi|326504546|dbj|BAJ91105.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508600|dbj|BAJ95822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 456
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 101/155 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L+ C +G K PT+IQ IPH L D IG +TGSGKT AFALPI+Q
Sbjct: 27 TFAELGICRELVEACDAMGWKQPTKIQAGAIPHALQGRDVIGLGQTGSGKTGAFALPIIQ 86
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E FA V++PTRELA QI +QF LG + L S++ GG+D + Q +AK+PH
Sbjct: 87 ALLEHRQPFFACVMSPTRELAIQIAEQFEALGSGIGLVCSVLVGGVDRMQQVLSIAKRPH 146
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ TPGRL DHL FSL ++K+LVLDEAD+L
Sbjct: 147 IVVGTPGRLLDHLKDTKGFSLTKVKYLVLDEADKL 181
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 99/151 (65%)
Query: 11 LKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCE 70
L L P L+ C+ + PT IQ IP L +D IG A+TGSGKT AFA+PIL
Sbjct: 79 LNLVPELLEACKNLNYSKPTPIQSRSIPPALKGKDIIGLAQTGSGKTAAFAIPILNSLWH 138
Query: 71 DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIA 130
D +A +L+PTRELA QI + F LG +M +R I GGM+M+DQ ++L +KPHI+I
Sbjct: 139 DQQPYYACILSPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQARDLMRKPHIIIG 198
Query: 131 TPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
TPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 199 TPGRLMDHLENTRGFSLRNLKYLVMDEADRL 229
>gi|156088623|ref|XP_001611718.1| DEAD/DEAH box helicase family protein [Babesia bovis]
gi|154798972|gb|EDO08150.1| DEAD/DEAH box helicase family protein [Babesia bovis]
Length = 480
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL + WLI+ + +K PT+IQ+ +P + + IGCA+TG+GKT+ F PIL
Sbjct: 68 SFKDLGVPEWLIQLASAVSIKAPTKIQELCLPAAFSGHNVIGCAQTGTGKTICFCWPILV 127
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++PYG+F LVLT +RELA+QIGDQF V G MN+R+ + GG D V+Q +L +PH
Sbjct: 128 ALAKNPYGVFGLVLTGSRELAFQIGDQFNVFGVQMNIRICVCVGGDDFVEQSLQLEARPH 187
Query: 127 IVIATPGRLADHLD-----TCNTFSLNRIKFLVLDEADRL 161
+VIATPGRLA +D N F ++K+LV DEAD+L
Sbjct: 188 VVIATPGRLAYQVDIKERNIANVFK--KVKYLVFDEADKL 225
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 103/155 (66%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L + L C +G K PT+IQ IP L D IG A+TGSGKT AFA+P+LQ
Sbjct: 80 SFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQ 139
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ LVLTPTRELA+QI +QF LG + ++ ++I GG+DM+ Q LAKKPH
Sbjct: 140 SLLACAQRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPH 199
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VIATPGRL DH++ F+L +K+LV+DEADR+
Sbjct: 200 VVIATPGRLIDHMENTKGFNLRALKYLVMDEADRI 234
>gi|403360910|gb|EJY80150.1| hypothetical protein OXYTRI_22568 [Oxytricha trifallax]
Length = 488
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 110/166 (66%), Gaps = 4/166 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ W+I+ + IG+K PT+IQ +PH+L ++ IGCA+TGSGKT FALP+LQ
Sbjct: 9 TFKSLNLDNWIIKNLEEIGIKAPTQIQIDSLPHILKGKNIIGCAQTGSGKTACFALPMLQ 68
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQF-LVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
K DPYG+F L+L P+REL QI +G+ MN+RV ++ GG+D + Q KEL + P
Sbjct: 69 KLAADPYGVFGLILAPSRELCMQIKQSIESFVGQNMNIRVCVLVGGVDYMKQIKELQEIP 128
Query: 126 HIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRLSLMTSLK 168
HI+IA PGR+ +LD + L ++FLV DEADR+ ++K
Sbjct: 129 HIIIACPGRMVHYLDNDHYGLKDYLQNLQFLVFDEADRMLTEDTMK 174
>gi|260808869|ref|XP_002599229.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
gi|229284506|gb|EEN55241.1| hypothetical protein BRAFLDRAFT_64422 [Branchiostoma floridae]
Length = 436
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 100/148 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + L C+ + TPT+IQ IP L +D IG A+TGSGKT FALPILQ
Sbjct: 22 TFKDLGVVDVLCEACEHLKWTTPTKIQTEAIPLALEGKDVIGLAETGSGKTGTFALPILQ 81
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
E P +FALVLTPTRELA+QI +QF LG + ++ ++ GG+DMV Q +LAKKPH
Sbjct: 82 SLLEKPQRLFALVLTPTRELAFQISEQFEALGSSIGIKCVVVVGGIDMVTQALQLAKKPH 141
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLV 154
++IATPGRL DHL+ F+L +K+LV
Sbjct: 142 VIIATPGRLVDHLENTKGFNLRALKYLV 169
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 100/145 (68%)
Query: 17 LIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIF 76
L + C + K PT+IQ IP L +D IG A+TGSGKT AF LPILQ + P +F
Sbjct: 6 LCQACDRLQWKQPTKIQCEAIPVALTGKDIIGLAETGSGKTAAFVLPILQALLDKPQRLF 65
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
AL+LTPTRELA+QI +Q LG + ++ ++I GG+DM+ Q LAKKPHI+I TPGRLA
Sbjct: 66 ALILTPTRELAFQISEQIEALGSSIGVQCAVIIGGIDMMTQSIMLAKKPHIIIGTPGRLA 125
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL FSL +K+LV+DEADR+
Sbjct: 126 DHLANTKGFSLRPLKYLVMDEADRI 150
>gi|146161285|ref|XP_977099.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146146797|gb|EAR86377.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 440
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ W+ + C +G + PT+IQ+ IP +L + I A+TGSGKT FA PILQ
Sbjct: 4 FAKLGLDSWIQKTCDKVGYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQD 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+DP+G+FA+VLT RELA QI +QF + G +NLRVS + GG+D Q EL + PHI
Sbjct: 64 LAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVDFNKQLSELERIPHI 123
Query: 128 VIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
V+ TPGR D +D + +K+LVLDEADRL
Sbjct: 124 VVGTPGRTLDMIDKSPVLKEYIENVKYLVLDEADRL 159
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 108/169 (63%), Gaps = 12/169 (7%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+K+F +L + L++ C+ +G K P++IQ +P L +D IG A+TGSGKT AFA+PI
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 65 LQKWCEDPY------------GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
LQ E Y FA VL+PTRELA QI +QF LG ++LR +++ GG+
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
Query: 113 DMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
D + Q L K+PH+++ATPGRL DH+ FSL +K+LVLDEADRL
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRL 176
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 108/169 (63%), Gaps = 12/169 (7%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+K+F +L + L++ C+ +G K P++IQ +P L +D IG A+TGSGKT AFA+PI
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 65 LQKWCEDPY------------GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
LQ E Y FA VL+PTRELA QI +QF LG ++LR +++ GG+
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
Query: 113 DMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
D + Q L K+PH+++ATPGRL DH+ FSL +K+LVLDEADRL
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRL 176
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 103/154 (66%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L + L +G K+P+ IQ+ IPH+L +D IG A+TGSGKT AF+LPILQ
Sbjct: 1 FEKLGICTQLAEAAAGLGWKSPSNIQEQAIPHLLQGQDVIGLAQTGSGKTGAFSLPILQA 60
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E P FAL+L+PTRELA QI +Q LG + ++ +++ GG+DM+ Q LAK+PHI
Sbjct: 61 LMERPQEHFALILSPTRELAIQIAEQVEALGSGIGVKCAVLVGGIDMMAQAIALAKRPHI 120
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGR+ DHL F+L ++K LVLDEAD+L
Sbjct: 121 LVGTPGRVVDHLSNTKGFNLKQLKHLVLDEADKL 154
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 91/133 (68%)
Query: 29 PTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRELAY 88
PT IQ IPH L +D IG A+TGSGKT AFA+PILQ E F LVL P RELAY
Sbjct: 6 PTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQTPYFGLVLAPARELAY 65
Query: 89 QIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLN 148
QI + F LG M +R + GGMDM+DQ ++L +KPHI+IATPGR+ DHL+ FSL
Sbjct: 66 QIKETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLK 125
Query: 149 RIKFLVLDEADRL 161
+K+ V+DEAD+L
Sbjct: 126 MLKYFVMDEADKL 138
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 108/169 (63%), Gaps = 12/169 (7%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+K+F +L + L++ C+ +G K P++IQ +P L +D IG A+TGSGKT AFA+PI
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 65 LQKWCEDPY------------GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
LQ E Y FA VL+PTRELA QI +QF LG ++LR +++ GG+
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
Query: 113 DMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
D + Q L K+PH+++ATPGRL DH+ FSL +K+LVLDEADRL
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRL 176
>gi|281205416|gb|EFA79607.1| hypothetical protein PPL_07466 [Polysphondylium pallidum PN500]
Length = 248
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 104/161 (64%), Gaps = 5/161 (3%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F DL L PWL+ C+ +G + PT +Q IP +L+ +D + AKTG GKT AFALPIL
Sbjct: 37 RRFDDLGLAPWLLDSCKELGFEAPTSVQYNTIPAILSGDDVLASAKTGQGKTAAFALPIL 96
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA--- 122
E+ YG+FA+VLTPTRELA QI +Q LG +N+ ++ G+ + D + L
Sbjct: 97 SALSENRYGVFAVVLTPTRELAVQIAEQIRTLGNAINVDCRVVIAGVAIEDALQSLTVDN 156
Query: 123 --KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PHI++ATPGRL+D+L+ +L +FLVLDEAD L
Sbjct: 157 DDKRPHIIVATPGRLSDNLNDTMKQALQHCRFLVLDEADHL 197
>gi|403217916|emb|CCK72408.1| hypothetical protein KNAG_0K00400 [Kazachstania naganishii CBS
8797]
Length = 432
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL L WL Q + + TPT++Q IP +L +CIG A+TGSGKTLAFA P+L
Sbjct: 9 SFADLGLAHWLCDSLQAMRIHTPTDVQTHCIPPILKGRNCIGGARTGSGKTLAFAGPMLT 68
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W DP +F +VLTPTRELA QI +Q LG +N+R +++ GG D V Q EL +PH
Sbjct: 69 EWSRDPAALFGVVLTPTRELAVQIHEQLCALGAQLNIRCALVVGGGDFVQQSLELQGRPH 128
Query: 127 IVIATPGRLADHL-----DTCNTFSLNR-IKFLVLDEAD 159
++ATPGRLA H+ + + L R ++LVLDEAD
Sbjct: 129 FIVATPGRLAHHIISDTPEAALSSLLKRYTRYLVLDEAD 167
>gi|255070425|ref|XP_002507294.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226522569|gb|ACO68552.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 484
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L LN WL ++G+ T T +Q+ IP +L D IG A+TG+GKT AFALPILQ
Sbjct: 70 FRSLGLNSWLCENITSMGIATATPVQRGCIPAILAGRDVIGVAQTGTGKTAAFALPILQI 129
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+PYGIF L LTPTRELA QI +QF+ M LR + GG ++ Q K L +PHI
Sbjct: 130 LGREPYGIFCLCLTPTRELASQISEQFIAFSAGMTLRCETVFGGENIRTQAKALMLRPHI 189
Query: 128 VIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
+ATPGRL DH C+ + ++ LVLDEADRL
Sbjct: 190 AVATPGRLMDHFLHCSAVAKCFENVRCLVLDEADRL 225
>gi|357474189|ref|XP_003607379.1| ATP-dependent RNA helicase DRS1 [Medicago truncatula]
gi|355508434|gb|AES89576.1| ATP-dependent RNA helicase DRS1 [Medicago truncatula]
Length = 479
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 109/163 (66%), Gaps = 6/163 (3%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D SF+DL L+ W++R C +G+++P +Q+ IP VL IG KTGSGKT AFAL
Sbjct: 279 DKHMSFSDLGLSEWMVRGCDKLGMQSPRPVQRHCIPKVLEGRHVIGIDKTGSGKTAAFAL 338
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+ E P+G+FALVLTPTRELA Q+ QF +LG + L ++++ GG+D Q K+L
Sbjct: 339 PILQRLGETPFGVFALVLTPTRELAVQLAHQFWILGSSLRLILTVVVGGLDKRIQAKQLV 398
Query: 123 KKPHIVIATPGR----LADHLDTCNTFSLNRIKFLVLDEADRL 161
+P++VIATP R L D+ + F+ KFLVLDEAD+L
Sbjct: 399 ARPNLVIATPERLKILLQDNPEIAPIFAAT--KFLVLDEADQL 439
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 97/163 (59%), Gaps = 29/163 (17%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+DL L+ W ++ C+ +G++TP +Q+ IP VL D +G +TGSGKT AFALPILQ
Sbjct: 2 SFSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPILQ 61
Query: 67 KWCED--PYG--IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
+ E P+G +FALVLTPTRELA Q+ DQFL LG + L
Sbjct: 62 RLAEHPKPFGVYVFALVLTPTRELAIQLADQFLALGSSL-------------------LP 102
Query: 123 KKPHIVIATPGRLA----DHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATP RL D+ + F+ KFLVLDEAD+L
Sbjct: 103 TSPHLVIATPERLRVLLLDNPEIATIFATT--KFLVLDEADQL 143
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 102/160 (63%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
+D +F L L L+ C+ +G + P+ IQ+ IP L D IG A+TGSGKT AFA
Sbjct: 15 DDKKPTFASLGLCKELVSACEELGWREPSAIQQKSIPEALQGRDVIGLAQTGSGKTGAFA 74
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ ++P +L+L+PTRELA QI +Q LG+ + +R + + GG++M Q L
Sbjct: 75 LPILQSLLDEPRTYHSLILSPTRELAIQIAEQVEALGRGIGVRTATLVGGIEMTSQAIML 134
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PH+V+ TPGR+ DHL+ F L +K LVLDEADRL
Sbjct: 135 GKRPHVVVGTPGRVVDHLENTKGFGLKALKVLVLDEADRL 174
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 108/169 (63%), Gaps = 12/169 (7%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+K+F +L + L++ C+ +G K P++IQ +P L +D IG A+TGSGKT AFA+PI
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 65 LQKWCEDPY------------GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
LQ E Y FA VL+PTRELA QI +QF LG ++LR +++ GG+
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLFGGI 127
Query: 113 DMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
D + Q L K+PH+++ATPGRL DH+ FSL +K+LVLDEADRL
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRL 176
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 100/156 (64%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+ +G PT IQ+ IP L D IG A+TGSGKT AF LP+L
Sbjct: 28 KTFRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPML 87
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +L+L PTRELA QI LG +++R +++ GGMDM+ Q L KKP
Sbjct: 88 QALMDKPQQFHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQAIALGKKP 147
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ATPGRL DHL+ FSL +K+LVLDEADRL
Sbjct: 148 HVIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRL 183
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F + + L +G K P+EIQ IP L +D IG A+TGSGKT AFALPIL
Sbjct: 15 EAFLGIGVCEELAEAAADLGWKAPSEIQAQSIPQALQGKDVIGLAQTGSGKTGAFALPIL 74
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ + P FALVL+PTRELA QI +QF LG + ++ +++ GG+DM+ Q +L K+P
Sbjct: 75 QELLDKPQAFFALVLSPTRELAIQIAEQFEALGAGIGVKTAVLVGGIDMMAQSIQLGKRP 134
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+V+ TPGR+ DHL F+L +++ L LDEADRL
Sbjct: 135 HVVVGTPGRVVDHLTNTKGFTLKQLQVLCLDEADRL 170
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 104/155 (67%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + L C+ +G K PT IQ+ +P+ L +D IG A+TGSGKTLAF LPILQ
Sbjct: 13 TFKELGVCEELSSACEKLGYKIPTPIQQQSLPYTLQKKDIIGLAETGSGKTLAFGLPILQ 72
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+P +AL+L+PTREL QI + F +G + L+ +I GGMD + Q K LA+KPH
Sbjct: 73 HLLANPQPYYALILSPTRELCVQIQEHFQAIGASIALKSVVILGGMDPLAQAKALAQKPH 132
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+I TPG++ HL+ F+L ++KFLVLDEAD+L
Sbjct: 133 IIIGTPGKILYHLENTKGFNLKQLKFLVLDEADKL 167
>gi|84995332|ref|XP_952388.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
gi|65302549|emb|CAI74656.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 477
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 112/163 (68%), Gaps = 3/163 (1%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ +++F L + W+I C+++ +K PT+IQ+ +P ++ IGC++TG+GKT+ F
Sbjct: 73 KENLETFEGLGVPNWIIEICKSLQIKKPTKIQQLCLPSAFKGKNLIGCSETGTGKTICFC 132
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
PIL ++PYG+++LVLTPTRELA+QI DQF + G MN+ V GG+D+V Q E+
Sbjct: 133 WPILTSLAKNPYGVYSLVLTPTRELAFQISDQFRIFGVNMNILVLSCVGGVDIVSQSIEM 192
Query: 122 AKKPHIVIATPGRLADHLDTC--NTFSL-NRIKFLVLDEADRL 161
K+PH++IATPGRLA + N S+ + +K+LV DE+DRL
Sbjct: 193 EKRPHVIIATPGRLAYQVSNAERNLSSIFSNVKYLVFDESDRL 235
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTI-GVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
++F DL + L C I G + PT IQ A +P L + D IG A+TGSGKT AFALPI
Sbjct: 17 QTFEDLGVCAELADACAKIMGWRAPTPIQCAAVPEALRERDVIGLAQTGSGKTGAFALPI 76
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + P G +L+L+PTRELA QI +Q LG + R + + GG+DM Q +L K+
Sbjct: 77 LQSLLDAPQGFHSLILSPTRELAMQIAEQIETLGAGVGARTATLVGGVDMTTQAIKLGKR 136
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+++ TPGR+ DHL+ FSL +K LVLDEADRL
Sbjct: 137 PHVIVGTPGRVVDHLENTKGFSLRALKVLVLDEADRL 173
>gi|71030512|ref|XP_764898.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68351854|gb|EAN32615.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 488
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+++F L + W+I C+++ +K PT+IQK +P ++ IGC++TG+GKT+ F PI
Sbjct: 76 LETFESLGVPNWIIEICKSLQIKKPTKIQKLCLPSAFKGKNLIGCSETGTGKTICFCWPI 135
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L ++PYG+++LVLTPTRELA+QI DQF + G MN+ V GG+D+V Q E+ K+
Sbjct: 136 LTSLAKNPYGVYSLVLTPTRELAFQISDQFRIFGVNMNIVVLSCVGGVDIVSQSIEMEKR 195
Query: 125 PHIVIATPGRLADHLDT--CNTFSL-NRIKFLVLDEADRL 161
PH++IATPGRLA + N S+ +K+LV DE+DRL
Sbjct: 196 PHVIIATPGRLAYQVSNPERNLSSIFANVKYLVFDESDRL 235
>gi|403347814|gb|EJY73340.1| hypothetical protein OXYTRI_05530 [Oxytricha trifallax]
Length = 508
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 103/158 (65%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L + +G K PT+IQ + + L +D IG A+TGSGKT AFA+P++Q
Sbjct: 60 TFEKLGVCSELQEALKNMGYKCPTKIQAESLQYTLKGKDIIGLAETGSGKTAAFAIPVIQ 119
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ ++P FA V++PTREL QI +QF +G + LR +++ GG+DMV Q L+K PH
Sbjct: 120 QLLDNPQPFFACVMSPTRELCVQIAEQFEAIGAGIGLRTAVLVGGLDMVSQAIALSKNPH 179
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
+VI TPGR+ADHL F L ++KFL+ DEADRL M
Sbjct: 180 VVIGTPGRMADHLANTKGFHLKKLKFLIFDEADRLLSM 217
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 100/155 (64%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L C + + IQ IPH LN +D IG A+TGSGKT AFALP+LQ
Sbjct: 38 TFASLGICKELCAACDAMKWPAASPIQIQSIPHALNGKDVIGLAQTGSGKTGAFALPVLQ 97
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+P LVL+PTRELA QI +QF LGK + ++ +++ GGMDM Q ++ K+PH
Sbjct: 98 DLLHEPRAFHTLVLSPTRELASQIAEQFECLGKDIGVKCAVLVGGMDMTSQSLQIGKRPH 157
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ TPGR+ DHL+ FSL ++K L+LDEADRL
Sbjct: 158 VLVGTPGRVVDHLENTKGFSLRQLKVLILDEADRL 192
>gi|428167084|gb|EKX36049.1| hypothetical protein GUITHDRAFT_165849 [Guillardia theta CCMP2712]
Length = 312
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 102/156 (65%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL ++ L C+ +G K PT+IQ+ IP L D I AKTGSGKT +FALPI+
Sbjct: 13 KSFEDLGISEQLAETCRALGWKHPTDIQQESIPWALQGRDLIALAKTGSGKTGSFALPII 72
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ ++P FA+V++PTRELA QI + F LGK + L+ + GG+D V Q + LAK P
Sbjct: 73 EALLKNPAPYFAVVISPTRELASQIEEHFQALGKGIGLKTVSVIGGIDEVTQMRMLAKTP 132
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ TPGRL L FSL IK+LVLDEADRL
Sbjct: 133 HVIVGTPGRLLYMLQNMKGFSLRNIKYLVLDEADRL 168
>gi|224137340|ref|XP_002322533.1| predicted protein [Populus trichocarpa]
gi|222867163|gb|EEF04294.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ K+F DL L L+ C+ +G K PT+IQ+ IP+ L +D IG A TGSGKT AF
Sbjct: 6 QETEKTFADLGLCKELVEACENLGWKKPTKIQEEAIPYALQGKDLIGVAATGSGKTGAFV 65
Query: 62 LPILQKWCEDPYG------IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMV 115
LP L+ +D F VL+PTRELA QI +QF LG + +R ++ GG DM+
Sbjct: 66 LPTLEAILKDSQERKSVQPFFVCVLSPTRELAIQIAEQFEALGSGIGVRCVVLVGGEDML 125
Query: 116 DQGKELAKK-PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
Q LAKK PH+++ TPGRLADHL FSL+ +K+L+LDEADRL M
Sbjct: 126 QQSIVLAKKRPHVIVGTPGRLADHLSNTKGFSLHALKYLILDEADRLLSM 175
>gi|71397105|ref|XP_802454.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70863162|gb|EAN81008.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 172
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 106/160 (66%), Gaps = 2/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L ++ WL +QC + ++ PT IQ+ IP +L + +G A TGSGKT AFALP+
Sbjct: 1 MSEFEQLGIHQWLSKQCAYMALQHPTPIQRLCIPAILAGKCVVGGAATGSGKTAAFALPV 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ ED YG+FALVLTP+RELAYQI DQF+ LG +++R +II GG+ Q L +
Sbjct: 61 LQILAEDLYGVFALVLTPSRELAYQIVDQFVALGAPLHIRTAIIIGGLPHEQQLDALKAR 120
Query: 125 PHIVIATPGRLADHLDTCNTF--SLNRIKFLVLDEADRLS 162
PH+V+ATPGRL L+ + ++FLVLDEADRL+
Sbjct: 121 PHVVVATPGRLKFMLEKFPEARKAFLHLRFLVLDEADRLT 160
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 101/154 (65%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L + L +G K P+ IQ+ IPH+L +D IG A+TGSGKT AF+LPILQ
Sbjct: 19 FEKLGICTQLAEAAAGLGWKAPSHIQEQAIPHLLAGQDVIGLAQTGSGKTGAFSLPILQA 78
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ P FAL+L+PTRELA QI +Q LG + ++ ++ GG+DM+ Q LAK+PH+
Sbjct: 79 LMDKPQEHFALILSPTRELAIQIAEQVEALGSGIGVKSCVLVGGIDMMAQAIALAKRPHV 138
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGR+ DHL FSL ++K LVLDEAD+L
Sbjct: 139 LVGTPGRVVDHLSNTKGFSLKQLKHLVLDEADKL 172
>gi|294889193|ref|XP_002772710.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239877218|gb|EER04526.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 240
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 106/163 (65%), Gaps = 4/163 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E+P+ +F L + P L + C + K P++IQ+ IP+ L D I A+TGSGKT AFA
Sbjct: 27 EEPV-TFESLGVCPELCKACDVLQWKHPSKIQEETIPYALQGRDLIALAETGSGKTGAFA 85
Query: 62 LPILQKWCED-PYG--IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+PI+QK + P+ +A VL PTREL Q G QF LG +NL + I GG+DMV Q
Sbjct: 86 IPIIQKLLDAAPHRKLTWACVLAPTRELCVQTGQQFEGLGASINLTTATIVGGLDMVTQA 145
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L+KKPHI++A+PGRL DHL+ F L IKFLV+DEADRL
Sbjct: 146 MSLSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRL 188
>gi|71405341|ref|XP_805297.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70868651|gb|EAN83446.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 507
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L ++ WL +QC + ++ PT IQK IP +L + +G A TGSGKT AFALP+
Sbjct: 1 MSEFEQLGIHQWLSKQCAYMALQHPTPIQKLCIPAILAGKCVVGGAATGSGKTAAFALPV 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ ED YG+FALVLTP+RELAYQI DQF+ LG +++R +II GG+ Q L +
Sbjct: 61 LQILAEDLYGVFALVLTPSRELAYQIVDQFVALGAPLHIRTAIIIGGLPHEQQLDALKAR 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNR-----IKFLVLDEADRLS 162
PH+V+ATPGRL L+ F R ++FLVLDEADRL+
Sbjct: 121 PHVVVATPGRLKFMLE---KFPEARKAFLHLRFLVLDEADRLT 160
>gi|154417727|ref|XP_001581883.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916114|gb|EAY20897.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 441
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M +P FT L ++ + C+ IG+ PT +Q+A + ++ +CI ++TG+GKT AF
Sbjct: 1 MNNP---FTSLGCPEFIYQTCKEIGISKPTAVQQACVKQIITGHNCIVISQTGTGKTAAF 57
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALPI+ +DPYGI+ALV++PTRELA QI QF + G+ MN + I GG+ + DQ
Sbjct: 58 ALPIISTLSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADICPIIGGLAITDQASA 117
Query: 121 LAKKPHIVIATPGRLADHLDTCNT----FSLNRIKFLVLDEADRL 161
L K PHIV+ATPGR+ HL + + FS + +++LVLDE DRL
Sbjct: 118 LEKNPHIVVATPGRILHHLRSASKGNTRFSFDNLQYLVLDEVDRL 162
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF+ L L+P L+ ++ PT+IQ A IP L D IG A+TGSGKT +FA+PIL
Sbjct: 39 KSFSSLNLHPSLLSSIASLQWTNPTQIQAASIPPALEGRDVIGLAETGSGKTGSFAIPIL 98
Query: 66 QKWCEDPYG-IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
E P +FA++L PTRELA+QI + + LG+ M + GG+DM Q LA+
Sbjct: 99 NYLLEKPQKQVFAVILAPTRELAFQIHEVMVALGRGMGANSVCVVGGVDMASQAIALARN 158
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
PH+V+ATPGRL DHL F L +IK+LV+DEADR+ M
Sbjct: 159 PHVVVATPGRLLDHLQNTKGFHLRQIKYLVMDEADRMLSM 198
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL L L C T+ PTEIQ+ IP L +D IG A+TGSGKT AFALP+L
Sbjct: 82 TFADLGLAEVLCEACATLKFTKPTEIQRRSIPLALQGKDVIGLAETGSGKTAAFALPVLH 141
Query: 67 KW--CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ FALVL PTRELA+QI F LG + L+ +++ GG+DM Q LAKK
Sbjct: 142 DLLATKGKKEFFALVLAPTRELAFQIRQTFNALGSPIGLKSAVLVGGIDMTTQAIALAKK 201
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH++IATPGRL DHL+ F L +++L++DEADR+
Sbjct: 202 PHVLIATPGRLVDHLENTKGFHLKALRYLIMDEADRM 238
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 21 CQTIGV---KTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYG-IF 76
C+T+ + PT IQ+A IP L +D IG A+TGSGKT AFALPILQ P+ +F
Sbjct: 114 CETLEILKFHKPTPIQQASIPLALAGKDLIGLAETGSGKTAAFALPILQALYHSPHSTLF 173
Query: 77 ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLA 136
A +L PTRELA+QI +Q +G + ++ +I GGMDM+ Q L+K+PHI++ATPGRL
Sbjct: 174 ACILAPTRELAFQISEQTEAIGGSLGVKTCVIVGGMDMMPQAIALSKRPHIIVATPGRLL 233
Query: 137 DHLDTCNTFSLNRIKFLVLDEADRL 161
DHL+ FSL IK+LV+DEADRL
Sbjct: 234 DHLENTKGFSLRSIKYLVMDEADRL 258
>gi|340057638|emb|CCC51984.1| putative ATP-dependent RNA helicase [Trypanosoma vivax Y486]
Length = 510
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 107/160 (66%), Gaps = 2/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L + WL +QC + + PT+IQK IP +L + +G A TGSGKT AFALP+
Sbjct: 1 MSEFELLGVQQWLAKQCTYMALHHPTQIQKLCIPAILAGKYVVGGAATGSGKTAAFALPL 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ ED YG+FALVLTP+RELAYQI DQF+ LG +++R ++I GG+ +Q L +
Sbjct: 61 LQILAEDIYGVFALVLTPSRELAYQILDQFIALGAPIHVRGALIIGGIPHEEQLSALNGR 120
Query: 125 PHIVIATPGRLADHLDTC--NTFSLNRIKFLVLDEADRLS 162
PH+VIATPGRL L T + + ++FLVLDEADRL+
Sbjct: 121 PHVVIATPGRLNFMLSTFPETRKAFSHLRFLVLDEADRLT 160
>gi|298711460|emb|CBJ32599.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 848
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 79/160 (49%), Positives = 99/160 (61%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED SF L + L +G TEIQ+ +P +D IG A+TGSGKT AFA
Sbjct: 402 EDIKASFESLGVTGPLCEAAAQLGWTHATEIQRQALPLAFEGKDVIGLAETGSGKTGAFA 461
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E+P +FA+++ PTRELA+QI + LG + L+ I GG+DM Q L
Sbjct: 462 LPILQALLENPQRLFAVIMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMFQQSVAL 521
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
A KPH+VIATPGRL DHL+ FSL K+LVLDEADR+
Sbjct: 522 ALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRM 561
>gi|308800454|ref|XP_003075008.1| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
gi|119358858|emb|CAL52279.2| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
Length = 419
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 111/172 (64%), Gaps = 5/172 (2%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F +L L +++ + + ++P+++Q IP +L +D IG A TGSGKT AFALPI
Sbjct: 1 MATFDELGLCNVVLKILKRVHFRSPSDVQSTCIPQILAGKDVIGIANTGSGKTAAFALPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ DPYGIFAL L+PTRELA QI DQF V G L +ITGG D++ Q L+++
Sbjct: 61 VDMLSRDPYGIFALCLSPTRELANQIADQFTVFGAGTGLNCMVITGGEDLIQQATALSRR 120
Query: 125 PHIVIATPGRLADH-LDTCNTFS-LNRIKFLVLDEADRL---SLMTSLKFFF 171
P+IV+ATPGRL +H + + NT +++K L+LDEADRL S LK+
Sbjct: 121 PNIVVATPGRLFEHFMHSSNTVQYFSKLKCLILDEADRLLDSSFAAELKYLM 172
>gi|407849369|gb|EKG04131.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 506
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 107/163 (65%), Gaps = 8/163 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L ++ WL +QC + ++ PT IQK IP +L + +G A TGSGKT AFALP+
Sbjct: 1 MSEFEQLGIHQWLSKQCAYMALQHPTPIQKLCIPAILAGKCVVGGAATGSGKTAAFALPV 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ ED YG+FALVLTP+RELAYQI DQF+ LG +++R +II GG+ Q L +
Sbjct: 61 LQILAEDLYGVFALVLTPSRELAYQIVDQFVALGAPLHIRTAIIIGGLPHEQQLDALKAR 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNR-----IKFLVLDEADRLS 162
PH+V+ATPGRL L+ F R ++FLVLDEADRL+
Sbjct: 121 PHVVVATPGRLKFILE---KFPEARKAFLHLRFLVLDEADRLT 160
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + P L + C + + P++IQ+ IP+ L D I A+TGSGKT AFA+PI+Q
Sbjct: 30 TFESLGVCPELCKACDVLQWEHPSKIQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQ 89
Query: 67 KWCED-PY--GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
K + P+ +A VL PTREL QIG QF LG +NL + I GG+DMV Q L+K
Sbjct: 90 KLLDAAPHRKSTWACVLAPTRELCVQIGQQFEGLGASINLTTATIVGGLDMVTQAMALSK 149
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++A+PGRL DHL+ F L IKFLV+DEADRL
Sbjct: 150 KPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRL 187
>gi|356520446|ref|XP_003528873.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
10-like [Glycine max]
Length = 438
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ IK+F DL + L+ C+ +G K+P +I IP L +D G A+TG GKT AFAL
Sbjct: 6 EGIKTFRDLGFSESLVEACEKLGWKSPLKIXTEAIPIALEGKDVTGLAQTGYGKTGAFAL 65
Query: 63 PILQKWCEDPY--GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
PIL E P F VL+PTRELA QI +QF LG + ++ +++ GG+DMV Q +
Sbjct: 66 PILHALLEAPRPKHFFDCVLSPTRELAIQIAEQFEALGSXIGVKCAVLVGGIDMVQQSIK 125
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+AK+PHI++ TP R+ DHL FSL R+K+LVLDEADRL
Sbjct: 126 IAKQPHIIVGTPRRVLDHLKHTKGFSLGRLKYLVLDEADRL 166
>gi|407409979|gb|EKF32597.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 499
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L ++ WL +QC + + PT IQ+ IP +L + +G A TGSGKT AFALP+
Sbjct: 1 MSEFEQLGIHQWLSKQCAYMALHHPTPIQRLCIPAILAGKCVVGGAATGSGKTAAFALPV 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ ED YG+FALVLTP+RELAYQI DQF+ LG +++R +II GG+ Q L +
Sbjct: 61 LQILAEDLYGVFALVLTPSRELAYQIVDQFVALGAPLHIRTAIIIGGLPHEQQLDALKAR 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNR-----IKFLVLDEADRLS 162
PH+V+ATPGRL L+ F R ++FLVLDEADRL+
Sbjct: 121 PHVVVATPGRLKFMLE---KFPEARKAFLHLRFLVLDEADRLT 160
>gi|156083174|ref|XP_001609071.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796321|gb|EDO05503.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 454
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 97/150 (64%), Gaps = 8/150 (5%)
Query: 12 KLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCED 71
+ +PW R PT IQ A IPH LN D IG A TGSGKT AF +P+L ED
Sbjct: 46 RASPWDGRH--------PTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPVLHHLLED 97
Query: 72 PYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIAT 131
I+ +VL P+REL QI +QF L + L+V +I GG+DMV Q LAK+PH+++A+
Sbjct: 98 VQRIYCVVLAPSRELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASALAKRPHVIVAS 157
Query: 132 PGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PGRLADH++ FSL+ +K LV+DEADRL
Sbjct: 158 PGRLADHVENTKGFSLSTVKKLVIDEADRL 187
>gi|409039684|gb|EKM49202.1| hypothetical protein PHACADRAFT_214474 [Phanerochaete carnosa
HHB-10118-sp]
Length = 555
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 7/151 (4%)
Query: 4 PIK---SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
P+K SF + ++ L+ + ++ PTEIQ A IP + EDCIG AK GSGKT+AF
Sbjct: 130 PVKHSASFAAMSISSPLLAVLNKMSIRAPTEIQAACIPPLFQAEDCIGNAKPGSGKTIAF 189
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
LPI+ + D +GIFALVLT TRELA+QI +QF +LG N+R +++ GGMD++ Q E
Sbjct: 190 VLPIIHRLSTDSHGIFALVLTSTRELAFQISEQFAILGAAFNIRTAVVVGGMDIMSQAIE 249
Query: 121 LAKKPHIVIATPGRLADHLDT----CNTFSL 147
L+ +PHIV+ TPGR+ D L T +TF+L
Sbjct: 250 LSNRPHIVVTTPGRIVDLLRTDRLLTSTFAL 280
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + P L + C + + P++IQ+ IP+ L D I A+TGSGKT AFA+PI+Q
Sbjct: 30 TFESLGVCPELCKACDVLQWEHPSKIQEETIPYALQGRDLIALAETGSGKTGAFAIPIIQ 89
Query: 67 KWCED-PYG--IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
K + P+ +A VL PTREL QIG QF LG +NL + I GG+DMV Q L+K
Sbjct: 90 KLLDAAPHRKLTWACVLAPTRELCVQIGQQFEGLGASINLTTATIVGGLDMVTQAMSLSK 149
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++A+PGRL DHL+ F L IKFLV+DEADRL
Sbjct: 150 KPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRL 187
>gi|412990251|emb|CCO19569.1| ATP-dependent RNA helicase DBP8 [Bathycoccus prasinos]
Length = 420
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E I++F L + WL +G+ T +QKA IP +L D IG ++TGSGKT FA
Sbjct: 5 ELSIRTFCSLGIKKWLAENAFKLGLCEATTVQKACIPPILKGLDVIGTSQTGSGKTATFA 64
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPIL +D YGIFAL +TPTRELA QI +QF L + LR +ITGG ++ Q + +
Sbjct: 65 LPILHILSQDSYGIFALCMTPTRELAVQISEQFSALSAGLTLRCQVITGGEEIQAQTRSI 124
Query: 122 AKKPHIVIATPGRLADH-LDTCNTFS-LNRIKFLVLDEADRL---SLMTSLKFFF 171
++PHI++ATPGRL DH L++ ++FLVLDEADRL S + L+ F
Sbjct: 125 LRRPHIIVATPGRLMDHFLNSPQVIGCFQNLRFLVLDEADRLLEPSFESELRILF 179
>gi|71748408|ref|XP_823259.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832927|gb|EAN78431.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 520
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L ++ WL +QC + + PT IQK IP +L + +G A TGSGKT AF LP+
Sbjct: 1 MSEFEALGVHQWLSKQCAYMALHHPTPIQKLCIPSILAGKCVVGGAATGSGKTAAFVLPL 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ EDPYG+FALVLTP+RELAYQI DQF+ LG +++R ++ GG+ Q L +
Sbjct: 61 LQILAEDPYGVFALVLTPSRELAYQILDQFVALGAPLHIRAALAIGGVPHEQQVSVLHGR 120
Query: 125 PHIVIATPGRLADHLDTCNTF--SLNRIKFLVLDEADRLS 162
PH+V+ATPGRL L T + + ++FLVLDEADRL+
Sbjct: 121 PHVVVATPGRLKFLLGTFPEARKAFSHLRFLVLDEADRLT 160
>gi|261333175|emb|CBH16170.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 520
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L ++ WL +QC + + PT IQK IP +L + +G A TGSGKT AF LP+
Sbjct: 1 MSEFEALGVHQWLSKQCAYMALHHPTPIQKLCIPSILAGKCVVGGAATGSGKTAAFVLPL 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ EDPYG+FALVLTP+RELAYQI DQF+ LG +++R ++ GG+ Q L +
Sbjct: 61 LQILAEDPYGVFALVLTPSRELAYQILDQFVALGAPLHIRAALAIGGVPHEQQVSVLHGR 120
Query: 125 PHIVIATPGRLADHLDTCNTF--SLNRIKFLVLDEADRLS 162
PH+V+ATPGRL L T + + ++FLVLDEADRL+
Sbjct: 121 PHVVVATPGRLKFLLGTFPEARKAFSHLRFLVLDEADRLT 160
>gi|308162131|gb|EFO64544.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 577
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+ L ++P L++ + PT+IQ+ +P+ + D G A+TGSGKTL FALPILQ
Sbjct: 79 TFSSLGVSPMLVQLLSQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPILQ 138
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +DPYGIFALVLTPTRELA QI Q G + ++ + GG D V+Q L +PH
Sbjct: 139 ELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGVQAQSLIGGKDSVEQSAILDSRPH 198
Query: 127 IVIATPGRLADHLDTC-NTFSLNRIKFLVLDEADRL 161
I+IATPGRLA L++ + R+K+LVLDEADRL
Sbjct: 199 ILIATPGRLAYMLESAVAQRNFRRMKYLVLDEADRL 234
>gi|159113361|ref|XP_001706907.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157435008|gb|EDO79233.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 560
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 102/156 (65%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+ L ++P L + + PT+IQ+ +P+ + D G A+TGSGKTL FALPILQ
Sbjct: 62 TFSSLGVSPMLAQLLNQYTITVPTDIQQKSLPYTMQGRDFCGIARTGSGKTLCFALPILQ 121
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +DPYGIFALVLTPTRELA QI Q G + ++ + GG D V+Q L +PH
Sbjct: 122 ELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLIGGKDSVEQSAILDSRPH 181
Query: 127 IVIATPGRLADHLDTCNT-FSLNRIKFLVLDEADRL 161
I+IATPGRLA L++ + R+K+LVLDEADRL
Sbjct: 182 ILIATPGRLAYMLESAAAQRNFRRMKYLVLDEADRL 217
>gi|429327439|gb|AFZ79199.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 501
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 106/161 (65%), Gaps = 7/161 (4%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F +L + WLI ++ +K PT+IQ+ +P ++ IGCA+TG+GKT+ F PIL
Sbjct: 86 RTFKELGVPSWLIDIADSLHIKAPTKIQELCLPPAFAGKNIIGCAQTGTGKTICFCWPIL 145
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+DPYG+FALVL+ +RELAYQI DQF + G MN+ V + GG+D+V Q ++ +P
Sbjct: 146 VALDKDPYGVFALVLSSSRELAYQIADQFNIFGARMNIDVLVCVGGVDIVYQAIKMESRP 205
Query: 126 HIVIATPGRLADHLD-----TCNTFSLNRIKFLVLDEADRL 161
HIVI TPGR+AD +D FS +K+LV DEAD+L
Sbjct: 206 HIVIGTPGRIADQVDIPERNISKIFS--NVKYLVFDEADKL 244
>gi|321464143|gb|EFX75153.1| hypothetical protein DAPPUDRAFT_226459 [Daphnia pulex]
Length = 447
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 97/155 (62%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F +L L L C + PT IQ+ IP L D IG A+TGSGKT AF L
Sbjct: 22 DTKTTFVELGLRSELEEACNLLKWTEPTPIQREAIPLALQGRDVIGLAETGSGKTGAFTL 81
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
P+L +P +F L+LTPTRELA+QI +Q LG + ++ ++I GG+DM+ Q LA
Sbjct: 82 PMLHSLLSNPQRLFGLILTPTRELAFQISEQIEALGSSIGVKCAVIVGGIDMISQSLMLA 141
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDE 157
KKPHIVIATPGRL DHL+ F+L +K+L +D+
Sbjct: 142 KKPHIVIATPGRLVDHLENTKGFNLKSLKYLEVDK 176
>gi|237845351|ref|XP_002371973.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|61676032|gb|AAX51681.1| DEAD box RNA helicase [Toxoplasma gondii]
gi|211969637|gb|EEB04833.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 479
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L T+G K+PT IQ ++P+ L D I A+TGSGKT AF LPILQ
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ + +AL+L PTREL QI Q L +G + + V + GG+D Q LAKKPH
Sbjct: 112 RLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPH 171
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ +PGR+ DHL FSL +K LVLDEADRL
Sbjct: 172 VVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRL 206
>gi|452821215|gb|EME28248.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 404
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 108/164 (65%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M +F L + L +C+ + +TP++IQ IP+ L D IG A+TGSGKT AF
Sbjct: 1 MSQDTYTFEKLGVCKILCEECKNVNYQTPSKIQIQAIPYALRGRDIIGIAETGSGKTAAF 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
+PILQ + FALV++PTRELA+QI + F +LG+ + LRV +I GG+D+V Q
Sbjct: 61 VIPILQSLLDHNKPYFALVISPTRELAFQIKEHFELLGRSIALRVVVIVGGVDIVSQAAA 120
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
A+KPH+++ATPGRL DHL+ FSL I+FLVLDEADRL M
Sbjct: 121 FARKPHVIVATPGRLVDHLENTKGFSLQSIRFLVLDEADRLLSM 164
>gi|221502154|gb|EEE27898.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 479
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L L T+G K+PT IQ ++P+ L D I A+TGSGKT AF LPILQ
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ + +AL+L PTREL QI Q L +G + + V + GG+D Q LAKKPH
Sbjct: 112 RLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAKKPH 171
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ +PGR+ DHL FSL +K LVLDEADRL
Sbjct: 172 VVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRL 206
>gi|253743820|gb|EET00114.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 559
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 102/156 (65%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+ L ++P L++ + PT+IQ+ +PH + D G A+TGSGKTL FALPILQ
Sbjct: 61 TFSSLGVSPMLVQLLSQYTITVPTDIQRQSLPHTMKGRDFCGIARTGSGKTLCFALPILQ 120
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ +DPYGIFALVLTPTRELA QI Q G + ++ + GG + +Q L +PH
Sbjct: 121 ELSQDPYGIFALVLTPTRELALQIEQQINAYGNPLGVQARSLIGGKESGEQSAVLDSRPH 180
Query: 127 IVIATPGRLADHLDT-CNTFSLNRIKFLVLDEADRL 161
I+IATPGRLA L++ + R+K+LVLDEADRL
Sbjct: 181 ILIATPGRLAYMLESNAAQKNFRRMKYLVLDEADRL 216
>gi|291000284|ref|XP_002682709.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
gi|284096337|gb|EFC49965.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
Length = 955
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SFTDL ++ WL + + PT IQ+ IP L ++ IG ++TGSGKT AFALPI+Q
Sbjct: 137 SFTDLGISSWLEEHLSKLQINMPTVIQEKCIPPTLAGKNVIGMSQTGSGKTAAFALPIIQ 196
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+D YGI+AL++TP RELA QI F +L + +RV+++ GGMD + Q L PH
Sbjct: 197 NLAKDMYGIYALIITPARELAIQIKQHFEILAGDLPIRVALLVGGMDYLKQAHLLDSSPH 256
Query: 127 IVIATPGRLADHLDTCNTFS-LNRIKFLVLDEADRL 161
IV+ TPGR+ D + T N +IK+LV DEADR+
Sbjct: 257 IVVGTPGRIEDAIRTFNNDGYFKKIKYLVFDEADRI 292
>gi|219111811|ref|XP_002177657.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410542|gb|EEC50471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 455
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDC--IGCAKTGSGKTLAFALPI 64
+F++L L L+ C+ +G K PT +Q+ IIP++L +D + A TGSGKT AF LPI
Sbjct: 9 NFSELGLADPLVTTCRQLGFKRPTPVQRVIIPYLLRHDDVHLLTLAATGSGKTAAFVLPI 68
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLG-KVMNLRVSIITGGMDMVDQGKELAK 123
L + DPYGIFA++LTPTRELA QI Q L LG N++ +++ GG+D Q +L +
Sbjct: 69 LHRLAPDPYGIFAVILTPTRELAKQIHQQVLALGSSAYNVQSALVVGGLDATRQSLDLDR 128
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+PH +ATPGRLA+ L L ++++VLDEADRL
Sbjct: 129 RPHFCVATPGRLAELLRGPRPPMLKHVRYMVLDEADRL 166
>gi|401414859|ref|XP_003871926.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488147|emb|CBZ23393.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 621
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/161 (47%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L + WL QC + ++TPT IQ+ IP +L +G A TGSGKT AFALPI
Sbjct: 1 MAEFHRLGIQRWLSEQCTYMALETPTPIQRKCIPAILAGRHVVGGAATGSGKTAAFALPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ D YG+FALVLTP+RELAYQI DQF+ G + +R + GG+ Q L +
Sbjct: 61 LQTLAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLQVRTMLAIGGVPTEAQVDALKAR 120
Query: 125 PHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRLS 162
PHIV ATPGRL L+ + +++LVLDEADRL+
Sbjct: 121 PHIVAATPGRLRHLLEVFAPEVKKAFAHLRYLVLDEADRLT 161
>gi|401400548|ref|XP_003880804.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
gi|325115216|emb|CBZ50771.1| dead box polypeptide 27, related [Neospora caninum Liverpool]
Length = 462
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 94/155 (60%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+ L L L T+G + PT IQ ++P+ L D I A+TGSGKT AF LPILQ
Sbjct: 34 TFSSLGLCAELCASVSTLGWRAPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 93
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ + +AL+L PTREL QI Q L +G + + V + GG+D Q LAKKPH
Sbjct: 94 QLLQRTQRFYALILAPTRELCLQISQQMLAMGGSLGVTVVTLVGGLDHNTQAIALAKKPH 153
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ +PGR+ DHL FSL +K LVLDEADRL
Sbjct: 154 VVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRL 188
>gi|399217362|emb|CCF74249.1| unnamed protein product [Babesia microti strain RI]
Length = 394
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 98/159 (61%), Gaps = 10/159 (6%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + P L C+++G KTPT IQ A IP L GSGKT AF LP+L
Sbjct: 3 KTFAELGICPELCEACESLGWKTPTAIQIATIPPALE----------GSGKTAAFVLPVL 52
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P +F + L PTREL QI +QF LG + L V+ I GG+DM Q L+K+P
Sbjct: 53 QSLLETPSRLFCVALAPTRELCAQISEQFKALGANIALEVATILGGLDMNSQAMALSKRP 112
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
H+++A+PGRL+DH++ F L KFL+LDEADR+ M
Sbjct: 113 HVIVASPGRLSDHIENTKGFFLKSSKFLILDEADRILSM 151
>gi|170099199|ref|XP_001880818.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644343|gb|EDR08593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 449
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 102/165 (61%), Gaps = 9/165 (5%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGC--------AKTGSGKT 57
K+F +L + L++ + + TPTEIQ IP + D IG A TGSGKT
Sbjct: 4 KTFAELGICAPLLQALEELKHTTPTEIQTGCIPQAIAGRDVIGSVWKLVIGIAPTGSGKT 63
Query: 58 LAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGG-MDMVD 116
LAFA+PIL + ++P G FA VL+PTRELAYQI QF LG M +R +I GG D V
Sbjct: 64 LAFAIPILHRLWDNPQGYFACVLSPTRELAYQISAQFEALGAAMGVRSVVIVGGDDDRVQ 123
Query: 117 QGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
Q +LA+KPHI++ATPGRL DHL+ T + + VLDEADRL
Sbjct: 124 QAVQLAQKPHIIVATPGRLHDHLNFHTTQPIIHLGLQVLDEADRL 168
>gi|157863926|ref|XP_001687513.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
gi|68223724|emb|CAJ01956.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
Length = 625
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 76/161 (47%), Positives = 97/161 (60%), Gaps = 3/161 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L + WL QC + ++TPT IQ IP +L +G A TGSGKT AFALPI
Sbjct: 1 MAEFQRLGIQRWLSEQCTYMALETPTPIQCKCIPAILAGRHVVGGAATGSGKTAAFALPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ D YG+FALVLTP+RELAYQI DQF+ G + +R + GG+ Q L +
Sbjct: 61 LQTLAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRTMLAVGGVPTETQVDALKAR 120
Query: 125 PHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRLS 162
PHIV ATPGRL L+ + +++LVLDEADRL+
Sbjct: 121 PHIVAATPGRLRHLLEVFAPEVQKAFAHLRYLVLDEADRLT 161
>gi|449015579|dbj|BAM78981.1| similar to ATP-dependent RNA helicase [Cyanidioschyzon merolae
strain 10D]
Length = 547
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 84/181 (46%), Positives = 106/181 (58%), Gaps = 24/181 (13%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDED--CIGCAKTGSGKTLAF 60
D ++F L L P L CQ + ++ PT IQ+A IP VLN+ IG A+TGSGKT AF
Sbjct: 4 DQTQTFAGLGLLPSLCEACQALRLQRPTPIQQACIPAVLNERYRVVIGAAETGSGKTAAF 63
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
LPILQ DP G FA++LTPTRELA QI +Q L LG + +RV + GG+D V Q
Sbjct: 64 VLPILQLLVRDPCGPFAVILTPTRELAAQIAEQTLALGSRVGVRVETVVGGLDAVHQTTV 123
Query: 121 LAK-KPHIVIATPGRLADHL-------------------DTCNTFSLNRIKFLVLDEADR 160
L + +PHI++ATPGRLA + C F R++FLVLDEADR
Sbjct: 124 LERERPHILVATPGRLAAFIRQQQAADQTLLPRRRPEGSQRCRYFC--RLRFLVLDEADR 181
Query: 161 L 161
L
Sbjct: 182 L 182
>gi|403221916|dbj|BAM40048.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 553
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 102/160 (63%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + WLI +++ +K PT IQ+ +P + IGC++TGSGKT+ F PIL
Sbjct: 75 TFESLGVPNWLIEISESLQIKKPTRIQELCLPSAFAGRNLIGCSETGSGKTICFCWPILV 134
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++PYG+F+L+LTPTRELA QI DQF V G +N+ + GG D++ Q E+ ++PH
Sbjct: 135 ALAKNPYGVFSLILTPTRELALQIEDQFRVFGSNLNVNIMSCVGGYDIIKQATEMERRPH 194
Query: 127 IVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRLA + + F+ +K+LVLDE DRL
Sbjct: 195 VVVATPGRLAYQVSIPERNLAKIFA--NVKYLVLDECDRL 232
>gi|342184289|emb|CCC93770.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 515
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L LI+ C G + PT IQ A IP V D IG A+TGSGKT A+ LP++
Sbjct: 44 TFKSLGLCEELIKACDEAGWRMPTRIQVATIPVVAEGRDVIGVAQTGSGKTGAYVLPLVN 103
Query: 67 KW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
W + PY + LV+ PTRELA Q+ QF++LG + LRV+ + GG DMVDQ EL+
Sbjct: 104 -WLLTQSKVPY-LSVLVMVPTRELAQQVTAQFIMLGNSVGLRVATLVGGADMVDQACELS 161
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PH+++ TPGR+ DHL+ F L ++ LVLDEAD++
Sbjct: 162 KRPHVIVGTPGRVKDHLNNTKGFQLVKLHALVLDEADKM 200
>gi|124801418|ref|XP_001349688.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7]
gi|3845295|gb|AAC71961.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7]
gi|156072124|gb|ABU45413.1| DEAD-box helicase 2 [Plasmodium falciparum]
Length = 562
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 72/157 (45%), Positives = 103/157 (65%), Gaps = 4/157 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + ++ + +G K PTEIQ+ I+PH +D IG ++TGSGKT F +PILQ
Sbjct: 157 TFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQ 216
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIIT--GGMDMVDQGKELAKK 124
+ +ALV++PTREL QI F LG MNL ++I T GG+D+V Q LAKK
Sbjct: 217 DLKVNKQSFYALVISPTRELCIQISQNFQALG--MNLLINICTIYGGVDIVTQSLNLAKK 274
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P+++++TPGR+ DHL+ F+L +K+LV DEAD+L
Sbjct: 275 PNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKL 311
>gi|398010050|ref|XP_003858223.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
gi|322496429|emb|CBZ31499.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
Length = 625
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 77/163 (47%), Positives = 98/163 (60%), Gaps = 7/163 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L + WL QC + ++TPT IQ IP +L +G A TGSGKT AFALPI
Sbjct: 1 MTEFQRLGIQRWLSEQCTYMALETPTPIQCKCIPAILAGRHVVGGAATGSGKTAAFALPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ D YG+FALVLTP+RELAYQI DQF+ G + +R + GG+ Q L +
Sbjct: 61 LQALAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRTMLAVGGVPTETQVDALKAR 120
Query: 125 PHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRLS 162
PHIV ATPGRL L + F+ +++LVLDEADRL+
Sbjct: 121 PHIVAATPGRLRHLLGVFAPEVKKAFA--HLRYLVLDEADRLT 161
>gi|146076775|ref|XP_001462999.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
gi|134067081|emb|CAM65345.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
Length = 625
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 77/163 (47%), Positives = 98/163 (60%), Gaps = 7/163 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F L + WL QC + ++TPT IQ IP +L +G A TGSGKT AFALPI
Sbjct: 1 MTEFQRLGIQRWLSEQCTYMALETPTPIQCKCIPAILAGRHVVGGAATGSGKTAAFALPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ D YG+FALVLTP+RELAYQI DQF+ G + +R + GG+ Q L +
Sbjct: 61 LQALAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRTMLAVGGVPTETQVDALKAR 120
Query: 125 PHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRLS 162
PHIV ATPGRL L + F+ +++LVLDEADRL+
Sbjct: 121 PHIVAATPGRLRHLLGVFAPEVKKAFA--HLRYLVLDEADRLT 161
>gi|71665094|ref|XP_819521.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70884825|gb|EAN97670.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 511
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 101/164 (61%), Gaps = 6/164 (3%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E SF L L LI C G + PT IQ A IP V D IG A+TGSGKT A+
Sbjct: 33 ESKCTSFKALGLCEELISACAEAGWQNPTRIQAATIPVVKEGRDIIGVAQTGSGKTGAYV 92
Query: 62 LPILQKW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
LP++ W + PY + LV+ PTRELA Q+ QF++LG + LRV+ + GG DMVDQ
Sbjct: 93 LPLV-NWLLTQSKVPY-LSVLVMVPTRELAQQVTAQFVMLGHSVGLRVATLVGGADMVDQ 150
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL+K+PH+V+ TPGR+ DHL F L ++ LVLDEAD++
Sbjct: 151 ACELSKRPHVVVGTPGRIKDHLQNTKGFQLVKLHALVLDEADKM 194
>gi|407849139|gb|EKG03976.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 511
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 101/164 (61%), Gaps = 6/164 (3%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E SF L L LI C G + PT IQ A IP V D IG A+TGSGKT A+
Sbjct: 33 ESKCTSFKALGLCEELISACAEAGWQNPTRIQAATIPVVKEGRDIIGVAQTGSGKTGAYV 92
Query: 62 LPILQKW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
LP++ W + PY + LV+ PTRELA Q+ QF++LG + LRV+ + GG DMVDQ
Sbjct: 93 LPLVN-WLLTQSKVPY-LSVLVMVPTRELAQQVTAQFVMLGHSVGLRVATLVGGADMVDQ 150
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL+K+PH+V+ TPGR+ DHL F L ++ LVLDEAD++
Sbjct: 151 ACELSKRPHVVVGTPGRIKDHLQNTKGFKLVKLHALVLDEADKM 194
>gi|449533536|ref|XP_004173730.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
[Cucumis sativus]
Length = 206
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 85/118 (72%)
Query: 44 EDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNL 103
+D IG A+TGSGKT AFALPILQ E P FA VL+PTRELA QI +QF LG + +
Sbjct: 1 KDLIGLAQTGSGKTGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGI 60
Query: 104 RVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ GG+DMV Q LAK+PH+V+ TPGRL DHL FSL +K+LVLDEADRL
Sbjct: 61 KCAVLVGGVDMVQQAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRL 118
>gi|126643895|ref|XP_001388135.1| ATP-dependent RNA helicase [Cryptosporidium parvum Iowa II]
gi|126117212|gb|EAZ51312.1| ATP-dependent RNA helicase, putative [Cryptosporidium parvum Iowa
II]
Length = 499
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
F +L L+ W+ C ++ ++TPT IQ IP++L + +G A TGSGKTL + LPILQ
Sbjct: 2 EFLNLGLHKWVQDTCDSLKIRTPTAIQSKSIPYILKGRNVVGNAPTGSGKTLCYCLPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL-AKKP 125
EDP+ +F LVL P+REL+YQ+ DQF V G +N ++TGG D +Q L K+P
Sbjct: 62 ILAEDPFSVFGLVLVPSRELSYQVLDQFQVFGNKVNANCQVLTGGFDESEQIHILNQKRP 121
Query: 126 HIVIATPGRLADHLD--TCNTFSLNR-IKFLVLDEADRL 161
HI+I TPGRL+ + N L R ++FLVLDEADRL
Sbjct: 122 HILIGTPGRLSSIISYPGSNISDLLRNLRFLVLDEADRL 160
>gi|125601387|gb|EAZ40963.1| hypothetical protein OsJ_25445 [Oryza sativa Japonica Group]
Length = 414
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 90/140 (64%), Gaps = 2/140 (1%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYG--IFALVLT 81
+G K PT IQ +IP L D IG +TGSGKT AFALPI+Q E + FA VL
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLA 60
Query: 82 PTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDT 141
PTRELA QI QF LG ++L+ S++ GG+ Q LAK+PH+V+ TPGRL DHL
Sbjct: 61 PTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLDHLTN 120
Query: 142 CNTFSLNRIKFLVLDEADRL 161
FS N++K+LVLDEAD L
Sbjct: 121 TKGFSFNKLKYLVLDEADDL 140
>gi|313214386|emb|CBY42776.1| unnamed protein product [Oikopleura dioica]
Length = 206
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ ++++ L + + + C + PT IQ+ IP + +D IG A+TGSGKT AFA+
Sbjct: 21 EGLEAWQSLGVCDEVAQTCVDLKWSKPTPIQQKSIPIAIEGKDVIGLAETGSGKTAAFAI 80
Query: 63 PILQKWCEDPYG--IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
P+LQ + P G + LV+TPTRELA+QI +QF LG + L + I GG++M+ Q
Sbjct: 81 PVLQTLLKTPGGGRLSCLVMTPTRELAFQIREQFQALGSSIGLSCACIVGGIEMMSQQLA 140
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPH+++ATPGRL DHL+ F+L +KFL++DEADR+
Sbjct: 141 LAKKPHVIVATPGRLVDHLEKTRGFNLKALKFLIMDEADRI 181
>gi|313228985|emb|CBY18137.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
+ ++++ L + + + C + PT IQ+ IP + +D IG A+TGSGKT AFA+
Sbjct: 21 EGLEAWQSLGVCDEVAQTCVDLKWSKPTPIQQKSIPIAIEGKDVIGLAETGSGKTAAFAI 80
Query: 63 PILQKWCEDPYG--IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
P+LQ + P G + LV+TPTRELA+QI +QF LG + L + I GG++M+ Q
Sbjct: 81 PVLQTLLKTPGGGRLSCLVMTPTRELAFQIREQFQALGSSIGLSCACIVGGIEMMSQQLA 140
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAKKPH+++ATPGRL DHL+ F+L +KFL++DEADR+
Sbjct: 141 LAKKPHVIVATPGRLVDHLEKTRGFNLKALKFLIMDEADRI 181
>gi|303390992|ref|XP_003073726.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302874|gb|ADM12366.1| ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 400
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L ++ L++ CQ G+ PTEIQK +IP VL D I ++TGSGKTLAF LPI+ +
Sbjct: 3 FDELNIDDSLVQACQRNGITRPTEIQKQVIPMVLGGNDIIAVSQTGSGKTLAFVLPIVSR 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
F LV+ PTREL+ QI + F + G LRV ++ GG + Q +L+K PHI
Sbjct: 63 LLLKNRSFFCLVVAPTRELSSQIAECFNMFGST-GLRVCLLVGGTNFNLQANQLSKHPHI 121
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADR 160
V+ TPGR+A+H+ +F RI+ LVLDEADR
Sbjct: 122 VVGTPGRIAEHILKTKSFKAERIRKLVLDEADR 154
>gi|164659074|ref|XP_001730662.1| hypothetical protein MGL_2458 [Malassezia globosa CBS 7966]
gi|159104558|gb|EDP43448.1| hypothetical protein MGL_2458 [Malassezia globosa CBS 7966]
Length = 452
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 102/156 (65%), Gaps = 8/156 (5%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPT 83
+ + PT IQ A IP +L D IG A+TGSGKTLAFALPIL +D G +A++LTPT
Sbjct: 2 VAINVPTPIQSACIPAILEGRDVIGGAETGSGKTLAFALPILHNLFKDTVGGYAVILTPT 61
Query: 84 RELAYQIGDQFLVLGK--VMNLRVSIITGGMDMVDQGKELA-KKPHIVIATPGRLADHLD 140
REL Q+ +QFL +G+ M L+ +++ GGMDM Q EL ++PHI++ATPGRL D L
Sbjct: 62 RELGVQLHEQFLAVGQGSRMGLKCALVLGGMDMTRQANELGEQRPHIIVATPGRLVDLLS 121
Query: 141 T--CNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
+ + L R KF+VLDEADRL + +L + F
Sbjct: 122 SGAAQEWGLERCKFVVLDEADRLLSPTFAPALAYLF 157
>gi|407409724|gb|EKF32444.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 512
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 100/159 (62%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L LI C G + PT IQ A IP V D IG A+TGSGKT A+ LP++
Sbjct: 38 SFKALGLCEELISVCAEAGWQNPTRIQAATIPVVKEGRDIIGVAQTGSGKTGAYVLPLV- 96
Query: 67 KW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
W + PY + LV+ PTRELA Q+ QF++LG + LRV+ + GG DMVDQ EL+
Sbjct: 97 NWLLTQSKVPY-LSVLVMVPTRELAQQVTAQFVMLGHSVGLRVATLVGGADMVDQACELS 155
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PH+V+ TPGR+ DHL F L ++ LVLDEAD++
Sbjct: 156 KRPHVVVGTPGRIKDHLQNTKGFQLVKLHALVLDEADKM 194
>gi|340505836|gb|EGR32122.1| hypothetical protein IMG5_095370 [Ichthyophthirius multifiliis]
Length = 540
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 95/157 (60%), Gaps = 16/157 (10%)
Query: 21 CQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVL 80
CQ + TPT IQ+ +PH L +D I A+TGSGKTL+FALPILQ++ P+ +AL+L
Sbjct: 138 CQRLNYITPTPIQQKSLPHTLKKKDIIALAETGSGKTLSFALPILQQFLNQPHEYYALIL 197
Query: 81 TPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI------------- 127
+PTREL QI + F LGK L+V +I GG+D + Q L+K PHI
Sbjct: 198 SPTRELCVQISESFENLGKEFGLKVVVIVGGLDPIKQMIALSKNPHISIYYNIIYIYIYL 257
Query: 128 ---VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ H F +N +KFLVLDEAD+L
Sbjct: 258 YILVVGTPGRIQYHFQNTKGFQMNNLKFLVLDEADKL 294
>gi|209880030|ref|XP_002141455.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209557061|gb|EEA07106.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 486
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PW+ C ++ + +PT IQ+ IP++L + +G A TGSGKT + P+LQ+
Sbjct: 3 FQSLGLLPWIQETCDSLKMHSPTVIQQKTIPYILKGRNVVGNAPTGSGKTACYCFPMLQQ 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK-KPH 126
+DP+ IF LVL P+REL YQ+ DQF V G +N R ++TGG D Q + K +PH
Sbjct: 63 LADDPFSIFGLVLLPSRELTYQVLDQFEVFGNKVNARCQVVTGGFDESQQIHLIDKRRPH 122
Query: 127 IVIATPGRLAD---HLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRLA H L+R+K LVLDEADRL
Sbjct: 123 ILIATPGRLASIIKHPSKLLEGFLSRLKILVLDEADRL 160
>gi|71747632|ref|XP_822871.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832539|gb|EAN78043.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 512
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L LI C+ G + PT IQ A IP V D IG A+TGSGKT A+ LP++
Sbjct: 41 TFKSLGLCEELIGACKEAGWRMPTRIQVATIPVVSEGRDIIGVAQTGSGKTGAYVLPLVN 100
Query: 67 KW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
W + PY + LV+ PTRELA Q+ QF++LG + LRV+ + GG DMVDQ EL+
Sbjct: 101 -WLLTQAKVPY-LSILVMVPTRELAQQVAAQFVMLGSSVGLRVATLVGGADMVDQACELS 158
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++PH+V+ TPGR+ DHL+ F L ++ LVLDEAD++
Sbjct: 159 RRPHVVVGTPGRVKDHLNNTKGFQLVKLHALVLDEADKM 197
>gi|261332683|emb|CBH15678.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 512
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L LI C+ G + PT IQ A IP V D IG A+TGSGKT A+ LP++
Sbjct: 41 TFKSLGLCEELIGACKEAGWRMPTRIQVATIPVVSEGRDIIGVAQTGSGKTGAYVLPLVN 100
Query: 67 KW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
W + PY + LV+ PTRELA Q+ QF++LG + LRV+ + GG DMVDQ EL+
Sbjct: 101 -WLLTQAKVPY-LSILVMVPTRELAQQVAAQFVMLGSSVGLRVATLVGGADMVDQACELS 158
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++PH+V+ TPGR+ DHL+ F L ++ LVLDEAD++
Sbjct: 159 RRPHVVVGTPGRVKDHLNNTKGFQLVKLHALVLDEADKM 197
>gi|126165248|ref|NP_001075198.1| probable ATP-dependent RNA helicase DDX49 [Bos taurus]
gi|119936045|gb|ABM06062.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Bos taurus]
Length = 392
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 79/105 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GG+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGL 108
>gi|296486179|tpg|DAA28292.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Bos taurus]
Length = 392
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 79/105 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GG+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGL 108
>gi|67612975|ref|XP_667267.1| ATP-dependent RNA helicase [Cryptosporidium hominis TU502]
gi|54658391|gb|EAL37042.1| ATP-dependent RNA helicase [Cryptosporidium hominis]
Length = 499
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 102/159 (64%), Gaps = 4/159 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
F +L L+ W+ C ++ ++TPT IQ IP++L + +G A TGSGKTL + LP+LQ
Sbjct: 2 EFLNLGLHKWVQDTCDSLKIQTPTAIQSKSIPYILKGRNVVGNAPTGSGKTLCYCLPMLQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL-AKKP 125
EDP+ +F LVL P+REL+YQ+ DQF V G +N ++TGG D +Q L K+P
Sbjct: 62 ILAEDPFSVFGLVLVPSRELSYQVLDQFQVFGNKVNANCQVLTGGFDESEQIHILNQKRP 121
Query: 126 HIVIATPGRLADHLD--TCNTFSLNR-IKFLVLDEADRL 161
HI+I TPGRL+ + N L R ++FLVLDEADRL
Sbjct: 122 HILIGTPGRLSSIISYPGSNISDLLRNLRFLVLDEADRL 160
>gi|326430346|gb|EGD75916.1| ATP-dependent RNA helicase RhlE [Salpingoeca sp. ATCC 50818]
Length = 2578
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Query: 13 LNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCE-- 70
L L + C+ +G + PT +Q+A IP L +D +G AKTGSGKT AFALP++
Sbjct: 2161 LEEVLCQACEDVGYRRPTPVQEAAIPPALEGKDIVGIAKTGSGKTAAFALPVMHSLINAR 2220
Query: 71 -DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVI 129
ALV+ PTRELA QI +F LG + L+ +++ GG+ + Q L++ PH++I
Sbjct: 2221 PRERRFHALVMAPTRELAQQIEGEFKALGATIGLKTALLVGGLSLQQQQDRLSQNPHVLI 2280
Query: 130 ATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
ATPGR+ HL+ N F LN +KFL+LDEADR+
Sbjct: 2281 ATPGRILHHLERTNGFKLNNVKFLILDEADRM 2312
>gi|397613527|gb|EJK62269.1| hypothetical protein THAOC_17124 [Thalassiosira oceanica]
Length = 604
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 76/168 (45%), Positives = 108/168 (64%), Gaps = 13/168 (7%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVL---NDEDC--IGCAKTGSGKTLAFA 61
+F DL L+P L+ C+ +G P+ +Q+A+IP +L N+E + A+TGSGKT AFA
Sbjct: 48 NFADLGLSPPLVSTCRKLGFHRPSAVQRAVIPQILKPLNNESSHLLTLAETGSGKTAAFA 107
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRV--SIITGGMDMVDQGK 119
LP+L DPYGIFAL+LTPTRELA QI Q L +G ++ +++ GG D+ Q
Sbjct: 108 LPLLHILSSDPYGIFALILTPTRELAKQIQQQILAIGSGSGWKIECALVIGGEDLTKQSL 167
Query: 120 ELAKKPHIVIATPGRLA----DHLDTCNTFSLN--RIKFLVLDEADRL 161
EL+++P+ V+ATPGR A D L + N ++KF++LDEADRL
Sbjct: 168 ELSRQPNFVVATPGRCAELCRDGLTGGGLYRPNFRKVKFVILDEADRL 215
>gi|154345774|ref|XP_001568824.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066166|emb|CAM43956.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 527
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 102/160 (63%), Gaps = 6/160 (3%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL L L C G + PT IQ + I V D IG A+TGSGKT A+ALP++
Sbjct: 53 KTFKDLGLCRELCMACAEAGWQHPTRIQASTITVVAEGRDLIGVAQTGSGKTGAYALPLV 112
Query: 66 QKWC----EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
W + PY + LV+ PTRELA Q+ QFL+LG+ + LRV+ + GG DMV+Q EL
Sbjct: 113 N-WLLTQPKTPY-LSVLVMVPTRELAQQVTAQFLLLGRSVGLRVATLVGGADMVEQACEL 170
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PH+++ TPGR+ DHL F L ++ LVLDEAD++
Sbjct: 171 SKRPHVIVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKM 210
>gi|303273504|ref|XP_003056113.1| dead-box ATP-dependent RNA helicase [Micromonas pusilla CCMP1545]
gi|226462197|gb|EEH59489.1| dead-box ATP-dependent RNA helicase [Micromonas pusilla CCMP1545]
Length = 445
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L LN L +G++ PT +Q+ IP +L D +G ++TGSGKT AFALPIL+
Sbjct: 32 TFASLGLNTRLCANVVKVGLQKPTAVQRECIPAILRGFDVVGTSQTGSGKTAAFALPILE 91
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
DPYGIF L LTPTRELA QI DQF + LR I+ GG + Q L+ +PH
Sbjct: 92 LLGVDPYGIFCLCLTPTRELASQIADQFDAFSSGILLRSCIVIGGESLRAQASALSSRPH 151
Query: 127 IVIATPGRLADHL----DTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRL +H + FS + LVLDEADRL
Sbjct: 152 VVVATPGRLVEHFLYNDEIVGAFS--NLHSLVLDEADRL 188
>gi|19074653|ref|NP_586159.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|74621115|sp|Q8SR63.1|RRP3_ENCCU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|19069295|emb|CAD25763.1| putative ATP-DEPENDENT RNA HELICASE [Encephalitozoon cuniculi
GB-M1]
gi|449330220|gb|AGE96481.1| putative ATP-dependent RNA helicase [Encephalitozoon cuniculi]
Length = 400
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL+++ LI+ CQ G+ PTE+Q+ +IP VL D I ++TGSGKTLAF LPI+
Sbjct: 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ + LV+ PTREL+ QI + F + + LRV ++ GG + Q +L+K+PH+
Sbjct: 63 LLQKNRSFYCLVVAPTRELSSQIAECFNMF-QATGLRVCLLVGGANFNVQANQLSKRPHV 121
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADR 160
V+ TPGR+A+H+ +F R++ VLDEADR
Sbjct: 122 VVGTPGRIAEHVLKTKSFRTERVRKFVLDEADR 154
>gi|390371036|dbj|GAB64917.1| DEAD/DEAH box helicase [Plasmodium cynomolgi strain B]
Length = 525
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 100/159 (62%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F DL + +++ +G K PT IQ+ ++P+ D IG ++TGSGKT F +
Sbjct: 122 DERATFRDLNICEEILQSIDELGWKKPTAIQRKMLPYAFQKRDIIGLSETGSGKTACFII 181
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+ E FALV++PTREL QI F LG + + + I GG+D+V Q LA
Sbjct: 182 PILQELREKRQSFFALVISPTRELCIQIAQHFQALGSNLLVNICTIFGGVDIVTQSLNLA 241
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+P+I+++TPGR+ DHL+ F+L +K+LV DEAD+L
Sbjct: 242 KRPNIIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKL 280
>gi|156093649|ref|XP_001612863.1| DEAD/DEAH box helicase [Plasmodium vivax Sal-1]
gi|148801737|gb|EDL43136.1| DEAD/DEAH box helicase, putative [Plasmodium vivax]
Length = 539
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 99/155 (63%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L + +++ + +G K PT IQ+ ++P D IG ++TGSGKT F +PILQ
Sbjct: 133 SFRELNICEEILQSIEELGWKKPTAIQRKMLPFAFQKRDIIGLSETGSGKTACFIIPILQ 192
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ E FALV++PTREL QI F LG + + + I GG+D+V Q LAKKP+
Sbjct: 193 ELREKRQSFFALVISPTRELCIQIAQHFQALGSNLLINICTIFGGVDIVTQSLNLAKKPN 252
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+++TPGR+ DHL+ F+L +K+LV DEAD+L
Sbjct: 253 IIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKL 287
>gi|391344217|ref|XP_003746399.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 155
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 91/132 (68%), Gaps = 2/132 (1%)
Query: 21 CQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVL 80
C+ + +TP++IQK IP L D IG +TGSGKT AFALPILQ E+P +FAL+L
Sbjct: 24 CEALKWRTPSKIQKEAIPVALQGRDIIGLTETGSGKTAAFALPILQTLLENPARLFALIL 83
Query: 81 TPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLD 140
TPTRE A+QI +QF LG + ++ ++I GG+D++ Q LAKKPH+VIATPGRL HL+
Sbjct: 84 TPTREFAFQISEQFGALGSTIGIKSAVIVGGIDLMTQAMMLAKKPHVVIATPGRLIGHLE 143
Query: 141 TCNTFSLNRIKF 152
NT NR F
Sbjct: 144 --NTPFHNRKTF 153
>gi|340057234|emb|CCC51576.1| putative DEAD box RNA helicase [Trypanosoma vivax Y486]
Length = 509
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L LI C+ G PT IQ A +P V D IG A+TGSGKT A+ LP++
Sbjct: 38 TFQQLGLCEELILACKEAGWSMPTRIQAATVPVVREGRDVIGVAQTGSGKTGAYVLPLVD 97
Query: 67 KW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
W + PY + LV+ PTRELA Q+ QF++LG+ + LRV + GG+DMVDQ +L+
Sbjct: 98 -WLLTQSKVPY-LSVLVMVPTRELAQQVTAQFVMLGRSVGLRVVTLVGGVDMVDQACDLS 155
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K+PH+V+ TPGR+ DHL+ F + ++ LVLDEAD++
Sbjct: 156 KRPHVVVGTPGRVKDHLNNTKGFQMVKLHALVLDEADKM 194
>gi|146163668|ref|XP_001012102.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146145909|gb|EAR91857.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 533
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 97/155 (62%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + L+ C + PT IQ+ + + L D I A+TGSGKTLAFALP++Q
Sbjct: 97 TFQSLGVCEELVEACNRLKYVKPTAIQRESLVYTLKQRDIIALAETGSGKTLAFALPVIQ 156
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ P +ALVL+PTREL QI + F LG ++L+ ++I GG+D + Q L+KKPH
Sbjct: 157 NLLDAPQPFYALVLSPTRELCMQIAEHFEALGVGISLKTTVIVGGLDPMAQAIALSKKPH 216
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+I TPGR+ H+ F+ +KFLVLDEAD+L
Sbjct: 217 IIIGTPGRILYHMQNTKGFNFKALKFLVLDEADKL 251
>gi|426197762|gb|EKV47689.1| hypothetical protein AGABI2DRAFT_185614 [Agaricus bisporus var.
bisporus H97]
Length = 433
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF+DL L LI+ + + +TPT+IQ IP L+ D IG A TGSGKT+AFALPIL
Sbjct: 4 KSFSDLGLCAPLIKALEDLKYETPTQIQAECIPPALSGRDIIGIAPTGSGKTIAFALPIL 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM-DMVDQGKELAKK 124
+ ++P FA +G QF LG M +R +I GG D V Q LAKK
Sbjct: 64 HRLWDNPQPNFAWYF-------LLLGTQFEALGATMGVRSVVIVGGEEDRVQQAVRLAKK 116
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PHI++ATPGRL DHL++ FSL ++K LVLDEADRL
Sbjct: 117 PHIIVATPGRLHDHLNSTKGFSLRQLKHLVLDEADRL 153
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/167 (44%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F DL L+ L R C+ +G TPT IQ AIIP L D G A+TGSGKT AFALP+L
Sbjct: 210 QCFNDLHLSRPLCRACEKLGYATPTPIQAAIIPIALTGRDVCGRAQTGSGKTAAFALPLL 269
Query: 66 QKWCEDP----YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
++ P I +++ PTRELA Q LG+ N++V+ I GG+ M Q L
Sbjct: 270 ERMLHRPKNAVSAIHVVIMVPTRELAVQCAQMIQRLGEYTNVQVATIVGGLSMERQAAAL 329
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLK 168
++P IV+ATPGRL DH+ ++F + +VLDEADRL M L+
Sbjct: 330 RQRPEIVVATPGRLIDHVRNTHSFGFEDVAAVVLDEADRLLEMGFLE 376
>gi|125559478|gb|EAZ05014.1| hypothetical protein OsI_27195 [Oryza sativa Indica Group]
Length = 414
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 24 IGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYG--IFALVLT 81
+G K PT IQ IP L D IG +TGSGKT AFALPI+Q E + A VL
Sbjct: 1 MGWKAPTRIQAEAIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPRFLACVLA 60
Query: 82 PTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDT 141
PTRELA QI QF LG ++L+ S++ GG+ Q LAK+PH+V+ TPGRL DHL
Sbjct: 61 PTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLDHLTN 120
Query: 142 CNTFSLNRIKFLVLDEADRL 161
FS N++K+LVLDEAD L
Sbjct: 121 TKGFSFNKLKYLVLDEADDL 140
>gi|219123243|ref|XP_002181938.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406539|gb|EEC46478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 433
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF L L C + KT T IQ +++P D IG A+TGSGKT AF LPIL
Sbjct: 39 QSFKSLGACETLQEACDRLEWKTATRIQASVLPEAFEGRDIIGLAETGSGKTGAFCLPIL 98
Query: 66 QKWCEDPY-GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
Q P G AL+LTPTRELA+QI LG+ M + GG+D Q L +
Sbjct: 99 QGLLRKPVKGTAALILTPTRELAFQILQVVQGLGQAMGATAVCVVGGVDRTSQAIALGRN 158
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
PH+VIATPGRL DHL F+LN++++LVLDEADR+ M
Sbjct: 159 PHVVIATPGRLLDHLKDTKGFNLNKVRYLVLDEADRMLSM 198
>gi|157876834|ref|XP_001686759.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
gi|68129834|emb|CAJ09140.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
Length = 527
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL L L C G + PT IQ + I D IG A+TGSGKT A+ALP++
Sbjct: 53 KTFQDLGLCQELCAACADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLV 112
Query: 66 QKWC----EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
W + PY + LV+ PTRELA Q+ QF++LG+ + LRV+ + GG DMV+Q EL
Sbjct: 113 N-WLLAQRKTPY-LSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACEL 170
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PH+V+ TPGR+ DHL F L ++ LVLDEAD++
Sbjct: 171 SKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKM 210
>gi|324513918|gb|ADY45697.1| ATP-dependent RNA helicase [Ascaris suum]
Length = 435
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 83/109 (76%)
Query: 53 GSGKTLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
GSGKT AFALPILQ + P +FAL+LTPTRELA+QI +QF LG + L V++I GG+
Sbjct: 37 GSGKTAAFALPILQALLDTPQKLFALILTPTRELAFQIAEQFDALGASIGLLVAVIVGGV 96
Query: 113 DMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
DMV Q LAK+PH+++ATPGRL DHL+ F+L +KFLV+DEADR+
Sbjct: 97 DMVTQALALAKRPHVIVATPGRLVDHLENTKGFNLRALKFLVMDEADRI 145
>gi|401420084|ref|XP_003874531.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490767|emb|CBZ26031.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 527
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL L L C G + PT IQ + I D IG A+TGSGKT A+ALP++
Sbjct: 53 KTFQDLGLCEELCSACAEAGWQHPTRIQASAITVFAEGRDLIGVAQTGSGKTGAYALPLV 112
Query: 66 QKWC----EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
W + PY + LV+ PTRELA Q+ QF++LG+ + LRV+ + GG DMV+Q EL
Sbjct: 113 N-WLLTQRKTPY-LSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACEL 170
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PH+++ TPGR+ DHL F L ++ LVLDEAD++
Sbjct: 171 SKRPHVIVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKM 210
>gi|302833349|ref|XP_002948238.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
gi|300266458|gb|EFJ50645.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
Length = 836
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 76/161 (47%), Positives = 96/161 (59%), Gaps = 3/161 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL L+ L++ + +G KTPT IQ A IP L D G A TGSGKT AFALP L+
Sbjct: 175 SFADLNLSRPLLKAVEALGYKTPTPIQAACIPLALAGRDICGSAVTGSGKTAAFALPFLE 234
Query: 67 KWCEDPYGI---FALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P G+ + LVLTPTRELA QI L + ++ V++I GG+ + Q L K
Sbjct: 235 RLLHRPRGLAATYVLVLTPTRELAVQIHSMIEKLAQFTDVTVALIVGGLSLSVQAATLRK 294
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
P +V+ATPGRL DHL + L + LVLDEADRL M
Sbjct: 295 LPEVVVATPGRLIDHLRNSQSVGLEDLAVLVLDEADRLLEM 335
>gi|146104251|ref|XP_001469775.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|398024294|ref|XP_003865308.1| DEAD box RNA helicase, putative [Leishmania donovani]
gi|134074145|emb|CAM72887.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|322503545|emb|CBZ38631.1| DEAD box RNA helicase, putative [Leishmania donovani]
Length = 527
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL L L C G + PT IQ + I D IG A+TGSGKT A+ALP++
Sbjct: 53 KTFQDLGLCQELCTACADAGWQHPTRIQASAITVFAEGRDLIGVAQTGSGKTGAYALPLV 112
Query: 66 QKWC----EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
W + PY + LV+ PTRELA Q+ QF++LG+ + LRV+ + GG DMV+Q EL
Sbjct: 113 -NWLLAQRKTPY-LSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACEL 170
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+K+PH+V+ TPGR+ DHL F L ++ LVLDEAD++
Sbjct: 171 SKRPHVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKM 210
>gi|358341811|dbj|GAA31574.2| ATP-dependent RNA helicase DDX47/RRP3 [Clonorchis sinensis]
Length = 464
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 22 QTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLT 81
+ +G P+EIQ IP L +D +G A+TGSGKT AFA+PILQ P FALVLT
Sbjct: 31 KKLGWSKPSEIQAKTIPQALRGKDVVGLAETGSGKTAAFAIPILQDLISKPKHNFALVLT 90
Query: 82 PTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL-AKKPHIVIATPGRLADHLD 140
PTRELA Q+ QF+ LG+V LRV + GG + DQ ++L K HI+I TPGR+ HL+
Sbjct: 91 PTRELALQLKSQFMDLGEVYGLRVICLVGGQHVEDQTRDLKVSKYHIIIGTPGRICYHLE 150
Query: 141 TCNTFSLNRIKFLVLDEADRL 161
LN I++LVLDEAD++
Sbjct: 151 NSKDLRLNHIRYLVLDEADQM 171
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 98/164 (59%), Gaps = 4/164 (2%)
Query: 2 EDPI---KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTL 58
ED I K F L+ L+ ++ + T+IQ + IP L D IG A+TGSGKT
Sbjct: 47 EDGIITSKPFASFGLHETLLSSIASLKWENATKIQASSIPPALEGRDVIGLAETGSGKTG 106
Query: 59 AFALPILQKWCEDP-YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
AF++P+L E P +FA++L PTRELA+QI + LG M + GG+DM Q
Sbjct: 107 AFSIPVLNYLLEKPQRSVFAVILAPTRELAFQIHEVVAALGSGMGASSVCVVGGVDMASQ 166
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LA+ PH+V+ATPGRL DHL F L +IK+LVLDEADR+
Sbjct: 167 AIALARNPHVVVATPGRLLDHLQNTKGFHLRQIKYLVLDEADRM 210
>gi|323455700|gb|EGB11568.1| hypothetical protein AURANDRAFT_2416, partial [Aureococcus
anophagefferens]
Length = 435
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 95/154 (61%)
Query: 11 LKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKWCE 70
L L+ L+ +G PT IQKA IP L+ D IG A+TGSGKT AF LPIL K E
Sbjct: 1 LGLHAALVDAVGELGWAKPTRIQKAAIPVALSGRDVIGLAETGSGKTGAFGLPILHKLLE 60
Query: 71 DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIVIA 130
P +F + L PTRELA QI + F LG + LR + GG+++ Q LAK PH+V+A
Sbjct: 61 KPSRLFGVALAPTRELAVQIHEVFDALGAAIGLRCVCVVGGVEIAAQALALAKLPHVVVA 120
Query: 131 TPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
TPGRL DHL+ FSL K LV+DEADR+ M
Sbjct: 121 TPGRLVDHLENTKGFSLRTCKCLVMDEADRMLSM 154
>gi|358256585|dbj|GAA50154.1| ATP-dependent RNA helicase DDX49/DBP8 [Clonorchis sinensis]
Length = 766
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 105/171 (61%), Gaps = 17/171 (9%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ + P +I + G+ PTE+Q IP V++ D + CAKTGSGKT F +PI+Q
Sbjct: 283 SFKDIGVCPEIITMLRDKGITKPTEVQSGCIPAVIDGMDVVACAKTGSGKTATFLIPIIQ 342
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQF----LVLGKVMNLRVSIITGGMDMVDQGKELA 122
+ +AL++TPTRELA+QIG+Q L+LG + V IITGG +V QG +LA
Sbjct: 343 SLMTELKPFYALIITPTRELAHQIGEQAAGLNLILGTSL-CNVLIITGGKSIVHQGIDLA 401
Query: 123 KKPHIVIATPGRLADHLDT------------CNTFSLNRIKFLVLDEADRL 161
+ PHIV+ATPGRLAD L T +SL R + +VLDEADRL
Sbjct: 402 RGPHIVVATPGRLADLLRTQQANLDDPSNPSSTEWSLMRTRVVVLDEADRL 452
>gi|224001104|ref|XP_002290224.1| RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220973646|gb|EED91976.1| RNA helicase, partial [Thalassiosira pseudonana CCMP1335]
Length = 471
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLN-----DEDCIGCAKTGSGKTLAFA 61
+F DL L P L++ C+ +G PT +Q AIIP +LN + + + TGSGKT AFA
Sbjct: 1 TFADLGLCPPLVQTCRKLGFARPTAVQSAIIPLILNPTSSSNHHLLTLSATGSGKTAAFA 60
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRV--SIITGGMDMVDQGK 119
LP+L DPYGI+AL+LTPTRELA QI Q L LG ++ ++I GG D+ Q
Sbjct: 61 LPLLHLLSSDPYGIYALILTPTRELAKQIQQQILALGSGSGWKITCALIIGGEDLTKQSL 120
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNR-----IKFLVLDEADRL 161
EL+++P+ +ATPGRLA+ + L R ++F+VLDEADRL
Sbjct: 121 ELSRQPNFCVATPGRLAELCRDGDGGGLYRPNFKKVRFVVLDEADRL 167
>gi|398803769|ref|ZP_10562787.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
gi|398096022|gb|EJL86353.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
Length = 481
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G +T T IQ+ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWC--EDP------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ E+P + + ALVL PTRELA Q+ Q + K NLR +++ GGMDM Q
Sbjct: 64 RMMKHENPSTSPARHPVRALVLLPTRELAVQVAQQVELYAKYTNLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 AELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|221052953|ref|XP_002257851.1| RNA helicase [Plasmodium knowlesi strain H]
gi|193807683|emb|CAQ38387.1| RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 546
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 99/159 (62%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F DL + +++ +G K PT IQ+ ++P D IG ++TGSGKT F +
Sbjct: 136 DERTTFRDLNICEEILQSIDELGWKKPTAIQRKMLPCAFQQRDIIGLSETGSGKTACFII 195
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+ + FALV++PTREL QI F LG + + + I GG+D+V Q LA
Sbjct: 196 PILQELRQKRQSFFALVISPTRELCIQIAQHFQALGSNLLVNICTIFGGVDIVTQSLNLA 255
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKP+I+++TPGR+ DHL+ F+L +K+LV DEAD+L
Sbjct: 256 KKPNIIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKL 294
>gi|426228754|ref|XP_004008461.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 isoform 2
[Ovis aries]
Length = 392
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 78/105 (74%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPILQK
Sbjct: 4 FAELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ I+ G+
Sbjct: 64 LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVLQGL 108
>gi|429963145|gb|ELA42689.1| ATP-dependent rRNA helicase RRP3 [Vittaforma corneae ATCC 50505]
Length = 341
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F ++KLN +I + + G+ PTEIQ+ P N D IG ++TGSGKT AF LPI+Q+
Sbjct: 3 FEEIKLNEKIIEKLKNRGIAEPTEIQRRTFPSAANGHDLIGISQTGSGKTFAFLLPIVQQ 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
AL+L PTRELA QI D L + +N+R ++++GG + +Q L KKPHI
Sbjct: 63 ILLSDKPFHALILVPTRELAQQIFD-ILSIFDGLNIRQALLSGGDNFNEQTNALNKKPHI 121
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADR 160
VI TPGR+A H++ F + RI+ L+ DEADR
Sbjct: 122 VIGTPGRVAKHIEKTKNFHIERIRKLIFDEADR 154
>gi|56758884|gb|AAW27582.1| SJCHGC09528 protein [Schistosoma japonicum]
Length = 454
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 14/169 (8%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L + P ++ + G+ PTE+QK IP +L D + CAKTGSGKT AF +PILQ
Sbjct: 2 SFGELGVCPEIVELLRDKGISAPTEVQKGCIPVILEGNDVVACAKTGSGKTAAFLIPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMN---LRVSIITGGMDMVDQGKELAK 123
+ ++AL++TPTRELA+QIG+Q L + V +ITGG ++ Q +LA+
Sbjct: 62 SLMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPLCNVLVITGGRSIIHQSIDLAR 121
Query: 124 KPHIVIATPGRLADHLDTC-----------NTFSLNRIKFLVLDEADRL 161
PHI+++TPGRLAD L T ++L+R K +VLDEADRL
Sbjct: 122 SPHIIVSTPGRLADLLRTQIAAQEANVTDKQEWTLSRTKVVVLDEADRL 170
>gi|145538955|ref|XP_001455172.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422971|emb|CAK87775.1| unnamed protein product [Paramecium tetraurelia]
Length = 431
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F +L L+ WL++ C I K P IQ IP +L ++ + ++TGSGKT AF+ PIL
Sbjct: 7 QKFEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPIL 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q +DPYGIFA++LT RELA QI +Q + G +NLR++++ GG+ Q K L + P
Sbjct: 67 QTLSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSQKQVKLLGQIP 126
Query: 126 HIVIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
HI+I TPGR A+ L F + +K+ +LDE DRL
Sbjct: 127 HIIIGTPGRCAELLSIDVNFQKYIKNVKYFILDEVDRL 164
>gi|160331647|ref|XP_001712530.1| rrp3 [Hemiselmis andersenii]
gi|159765979|gb|ABW98205.1| rrp3 [Hemiselmis andersenii]
Length = 398
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 96/155 (61%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L ++ L R C+ PT+IQ +IPH LN D IG A+TGSGKT+A+ LPI+Q
Sbjct: 3 SFDKLGISKELCRICKANNFFIPTKIQAKVIPHALNGRDIIGYAQTGSGKTIAYLLPIIQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ F+++L P+RELA+QI F G + +++ ++ GG++ Q L+ PH
Sbjct: 63 NLVKKKTAFFSIILVPSRELAFQIASYFEAFGNIFGIKIVVLVGGLENFSQKALLSLNPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+I TPGRL +HL+ + +++ LV+DEADRL
Sbjct: 123 ILICTPGRLIEHLEKFLKNKIKKLEILVIDEADRL 157
>gi|320587284|gb|EFW99764.1| ATP-dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 481
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 97/156 (62%), Gaps = 14/156 (8%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L L C+ +G PT IQ A IP L + D IG A+TGSGKT+AFALP+L
Sbjct: 70 KTFKELGLVDALCEVCEMLGYTAPTPIQAAAIPVALKNRDIIGTAETGSGKTIAFALPML 129
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL+PTRELA QIG F + +LR +++ GGMDMV Q LAKKP
Sbjct: 130 QALLDRPRPLFGLVLSPTRELAVQIGQTFESFAAI-SLRCAVVVGGMDMVSQSIALAKKP 188
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+V T G FSL +++LV+DEADRL
Sbjct: 189 HVV--TKG-----------FSLKHLQYLVIDEADRL 211
>gi|256070762|ref|XP_002571711.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646384|emb|CCD58943.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 453
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 106/169 (62%), Gaps = 14/169 (8%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + P ++ + G+ PTE+Q+ IP +L D + CAKTGSGKT AF +PILQ
Sbjct: 2 TFEELGVCPEIVELLRDKGINKPTEVQEGCIPVILEGNDVVACAKTGSGKTAAFLIPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMN---LRVSIITGGMDMVDQGKELAK 123
+ ++AL++TPTRELA+QIG+Q L + V +ITGG +V Q +LA+
Sbjct: 62 SLMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPLCNVLVITGGRSIVHQSIDLAR 121
Query: 124 KPHIVIATPGRLADHL---------DTCN--TFSLNRIKFLVLDEADRL 161
PHIV++TPGRLAD L DT N ++L+R K +VLDEADRL
Sbjct: 122 SPHIVVSTPGRLADLLRTQTAAQEADTENKPEWTLSRTKVVVLDEADRL 170
>gi|145515375|ref|XP_001443587.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410976|emb|CAK76190.1| unnamed protein product [Paramecium tetraurelia]
Length = 431
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+ F +L L+ WL++ C I K P IQ IP +L ++ + ++TGSGKT AF+ PIL
Sbjct: 7 QKFEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPIL 66
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q +DPYGIFA++LT RELA QI +Q + G +NLR++++ GG+ Q K L + P
Sbjct: 67 QTLSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVKLLGQIP 126
Query: 126 HIVIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
HI++ TPGR A+ L F + +K+ +LDE DRL
Sbjct: 127 HIIVGTPGRCAELLSIDVNFQKYIKNVKYFILDEVDRL 164
>gi|91792246|ref|YP_561897.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
gi|91714248|gb|ABE54174.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
Length = 433
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 95/159 (59%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T +Q+ IP + ED + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGI-----FALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E P + AL+LTPTRELA Q+ D K MN+ V I GGM M Q ++L
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I++ATPGRL +H+ CN SL+ ++FLVLDEADR+
Sbjct: 123 QGADIIVATPGRLLEHIVACN-LSLSNVEFLVLDEADRM 160
>gi|121606092|ref|YP_983421.1| DEAD/DEAH box helicase [Polaromonas naphthalenivorans CJ2]
gi|120595061|gb|ABM38500.1| DEAD/DEAH box helicase domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 487
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G +T T IQ+ IP VL +D +G A+TG+GKT AFALP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFALPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ +Q + K NL +++ GGMDM Q
Sbjct: 64 RMMKHENASTSPARHPVRALVLLPTRELAVQVAEQVKLYAKYTNLNSAVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ NT LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNTV-LNQVEYVVLDEADRM 165
>gi|308159475|gb|EFO62004.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 449
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDC--IGCAKTGSGKTLAFALPIL 65
F DL + P L+ + IG PT IQK ++ V +++ C +G A+TGSGKT AFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWLEPTAIQKEMLAVVSHNKACDVVGVAETGSGKTGAFAIPAL 62
Query: 66 QKWCE---DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
Q E + G+ +VL+PTRELA Q F LGK LR ++ GG+D++ Q K LA
Sbjct: 63 QDLLERGNNVKGVHTVVLSPTRELAVQTFSVFRDLGKGFGLRTGLVIGGVDLMQQRKTLA 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++PH++I TPGRL DHL T FSL ++FL++DEAD++
Sbjct: 123 QQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKM 161
>gi|68074823|ref|XP_679328.1| RNA helicase [Plasmodium berghei strain ANKA]
gi|56500050|emb|CAH96512.1| RNA helicase , putative [Plasmodium berghei]
Length = 421
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L ++ WLI+ +++ + PT+IQK +P ++ ++ IG ++TG+GKT+ + +LQ
Sbjct: 1 SFEELGVDDWLIKISKSVQIIKPTKIQKLCLPLIIEGKNVIGSSETGTGKTICYCWGMLQ 60
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ ++ Y IF L+L PTREL +QI +QF + G + +++ GG ++DQ K + KPH
Sbjct: 61 ELNKNLYAIFGLILLPTRELVFQIVEQFQLYGNKIGVKILSCIGGFSLIDQRKSILSKPH 120
Query: 127 IVIATPGRLADHLDTC----NTFSLNRIKFLVLDEADRL 161
IV+ TPGR++D LD C N F R+KFLVLDEAD L
Sbjct: 121 IVVGTPGRVSDILDDCIDVKNCFK--RLKFLVLDEADLL 157
>gi|159117282|ref|XP_001708861.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157436975|gb|EDO81187.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 450
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDC--IGCAKTGSGKTLAFALPIL 65
F DL + P L+ + IG PT IQK ++ V +++ C +G A+TGSGKT AFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWLEPTAIQKEMLTVVSHNKACDVVGVAETGSGKTGAFAIPAL 62
Query: 66 QKWCE---DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
Q E + G+ +VL+PTRELA Q F LGK LR ++ GG+D++ Q K LA
Sbjct: 63 QDLLERGTNVKGVHTVVLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRKTLA 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++PH++I TPGRL DHL T FSL ++FL++DEAD++
Sbjct: 123 QQPHVLICTPGRLVDHLATTEGFSLKSLRFLIIDEADKM 161
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 73/161 (45%), Positives = 96/161 (59%), Gaps = 3/161 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ L++ + +G K+PT IQ A IP L D G A TGSGKT AFALP L+
Sbjct: 150 SFADLNISRPLLKAVEALGYKSPTPIQAACIPLALAGRDICGSAVTGSGKTAAFALPFLE 209
Query: 67 KWCEDPYGI---FALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P G+ + LVLTPTRELA QI L + ++ V++I GG+ + Q L +
Sbjct: 210 RLLHRPRGLAATYVLVLTPTRELAVQIHSMIEKLAQFTDINVALIVGGLSLQVQAITLRQ 269
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
P +V+ATPGRL DHL + L + LVLDEADRL M
Sbjct: 270 SPEVVVATPGRLIDHLRNSQSVGLEDLAVLVLDEADRLLEM 310
>gi|70945861|ref|XP_742705.1| RNA helicase [Plasmodium chabaudi chabaudi]
gi|56521835|emb|CAH78029.1| RNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 483
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 101/160 (63%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ I SF+ L + +++ + +G + PT IQ+ ++P V D IG ++TGSGKT F
Sbjct: 93 QNEITSFSQLNICEEVLQSIKELGWEKPTLIQQKVLPLVFQKRDIIGLSETGSGKTACFI 152
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PILQ+ FAL+++PTREL QI LG + + + I GG+D+V Q L
Sbjct: 153 IPILQELKYKKQSFFALIISPTRELCIQIAQNAQALGSNLLINICTIFGGVDIVTQSLNL 212
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKP+I+I+TPGR+ DHL+ F+L +K+LV DEAD+L
Sbjct: 213 AKKPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDEADKL 252
>gi|340385824|ref|XP_003391408.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like, partial
[Amphimedon queenslandica]
Length = 111
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 78/106 (73%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+ L L+ WL+RQC+ +G K T +QK IP ++ DCIG AKTGSGKT AFALPIL
Sbjct: 6 TFSSLGLSSWLVRQCEGLGFKEATPVQKNCIPPIMEGRDCIGSAKTGSGKTAAFALPILH 65
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGM 112
DPYGI+ALVLTPTRELAYQI DQF VLGK + ++ +I GG+
Sbjct: 66 SLSRDPYGIYALVLTPTRELAYQISDQFCVLGKHIGVKSEVIVGGV 111
>gi|91787410|ref|YP_548362.1| DEAD/DEAH box helicase [Polaromonas sp. JS666]
gi|91696635|gb|ABE43464.1| DEAD/DEAH box helicase-like protein [Polaromonas sp. JS666]
Length = 492
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 105/163 (64%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G +T T IQ+ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ +Q + K NLR +++ GGMDM Q
Sbjct: 64 RMLKHENASTSPARHPVRALVLLPTRELAVQVAEQVKLYAKHTNLRSAVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL + +++ATPGRL DH++ NT LN+++++VLDEADR+
Sbjct: 124 LELKQGVEVLVATPGRLLDHIEAKNTV-LNQVEYVVLDEADRM 165
>gi|70934104|ref|XP_738327.1| helicase [Plasmodium chabaudi chabaudi]
gi|56514456|emb|CAH79988.1| helicase, putative [Plasmodium chabaudi chabaudi]
Length = 196
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ WLI+ +++ + PT+IQK +P ++ ++ IG ++TG+GKT+ + +LQ
Sbjct: 2 SFEDLGVDDWLIKISKSVQILKPTKIQKLCLPLIIEGKNVIGSSETGTGKTICYCWSMLQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ ++ Y IF L+L PTREL +QI +QF + G + +++ GG ++DQ + + KPH
Sbjct: 62 ELNKNFYAIFGLILLPTRELVFQIVEQFQLYGNKIGIKILSCIGGFSLIDQRRSILSKPH 121
Query: 127 IVIATPGRLADHLDTC----NTFSLNRIKFLVLDEADRL 161
IV+ TPGR++D +D C N F R+KFLVLDEAD L
Sbjct: 122 IVVGTPGRVSDIIDDCIDVKNCF--KRLKFLVLDEADLL 158
>gi|297622829|ref|YP_003704263.1| DEAD/DEAH box helicase [Truepera radiovictrix DSM 17093]
gi|297164009|gb|ADI13720.1| DEAD/DEAH box helicase domain protein [Truepera radiovictrix DSM
17093]
Length = 442
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 97/162 (59%), Gaps = 2/162 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M DP SF L+P L + Q G TPT IQ+A IP L D +G A+TG+GKT AF
Sbjct: 1 MTDPQNSFHGFHLHPRLDQGLQAAGYTTPTPIQRAAIPAALAGRDLLGLAQTGTGKTAAF 60
Query: 61 ALPILQKWCEDPYG-IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
LP+L + + P + ALV+ PTRELA QI + VLG+ LR + + GG+ M Q +
Sbjct: 61 VLPLLHRLMDGPRSCVRALVVAPTRELAEQIHGEIGVLGRATGLRSATVYGGVGMAPQAR 120
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L I++A PGRL DHL+ T +L +++ LVLDEAD +
Sbjct: 121 ALRGGAEIIVACPGRLLDHLER-GTGTLAKLEVLVLDEADHM 161
>gi|156096160|ref|XP_001614114.1| DEAD/DEAH box helicase domain containing protein [Plasmodium vivax
Sal-1]
gi|148802988|gb|EDL44387.1| DEAD/DEAH box helicase domain containing protein [Plasmodium vivax]
Length = 489
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
P +F +L + WL++ +T+ + PT+IQ+ +P ++ + IG ++TG+GKT+ +
Sbjct: 55 SPPVTFEELGVEDWLVKISKTVQISHPTKIQQLCLPLIMRGHNVIGTSETGTGKTICYCW 114
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
ILQ+ ++P+G+FALVL PTREL Q+ +QFL+ G + +++ GG +++Q + +
Sbjct: 115 GILQELNKNPFGVFALVLLPTRELVVQVVEQFLLYGHKIGIKIISCIGGSSLIEQRRGVL 174
Query: 123 KKPHIVIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
KPH+V+ TPGR +D +D C R++FLVLDEAD L
Sbjct: 175 AKPHVVVGTPGRTSDVMDNCEDVRSCFRRLRFLVLDEADLL 215
>gi|68071817|ref|XP_677822.1| RNA helicase [Plasmodium berghei strain ANKA]
gi|56498080|emb|CAH95521.1| RNA helicase, putative [Plasmodium berghei]
Length = 499
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
I SF+ L + +++ Q +G + PT IQ+ ++P + D IG ++TGSGKT F +P
Sbjct: 91 EITSFSQLNICEEILQSIQELGWEKPTLIQQKVLPLMFQKRDIIGLSETGSGKTACFIIP 150
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQ+ FAL+++PTREL QI LG + + + I GG+D+V Q LAK
Sbjct: 151 ILQELKLKKQNFFALIISPTRELCIQIAQNAQALGSNLLINICTIFGGVDIVTQSLNLAK 210
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KP+I+I+TPGR+ DHL+ F+L +K+LV DEAD+L
Sbjct: 211 KPNIIISTPGRILDHLNNTKGFNLKNLKYLVFDEADKL 248
>gi|399949627|gb|AFP65285.1| DEAD box protein [Chroomonas mesostigmatica CCMP1168]
Length = 398
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 94/155 (60%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL + L R ++G K PT+IQ IPH LN +D IG A+TGSGKT+A+ LPI+Q
Sbjct: 3 TFKDLGICEQLNRITVSLGYKKPTKIQIFTIPHALNKKDIIGYAQTGSGKTIAYLLPIVQ 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+L++ P RELA+QI F G + +R++++ GG++ Q + PH
Sbjct: 63 NLIIRKSIFNSLIIVPARELAFQIASHFEAFGNIFGIRIAVVVGGINAGPQKALIFMNPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+I+TPGRL DHL L++I VLDEADRL
Sbjct: 123 ILISTPGRLVDHLAKTIKLKLDKISIFVLDEADRL 157
>gi|153006338|ref|YP_001380663.1| DEAD/DEAH box helicase [Anaeromyxobacter sp. Fw109-5]
gi|152029911|gb|ABS27679.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter sp.
Fw109-5]
Length = 455
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L L+P + + G + PT IQ IP L +D IG A TG+GKT AF LP++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ P G ALVL PTRELA QIG++ G +R ++I GG+ M Q + L +K
Sbjct: 65 RLAGKP-GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IVIATPGRL DHL+ N L+ I+ LVLDEADR+
Sbjct: 124 IVIATPGRLVDHLEQGNA-RLDGIEALVLDEADRM 157
>gi|376261585|ref|YP_005148305.1| DNA/RNA helicase [Clostridium sp. BNL1100]
gi|373945579|gb|AEY66500.1| DNA/RNA helicase, superfamily II [Clostridium sp. BNL1100]
Length = 481
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 106/160 (66%), Gaps = 5/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI-- 64
+F+D KL+ +++ + K+PT++Q+ +IP VL +D I ++TGSGKT AFA+PI
Sbjct: 4 AFSDYKLSSEILKAISMLNFKSPTKVQEKVIPAVLEQKDIIVKSQTGSGKTAAFAVPICE 63
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L +W E+ ALV+TPTRELA Q+ + LG+ L+VS I G +Q KEL +K
Sbjct: 64 LVEWDENKPQ--ALVITPTRELAIQVKEDMFNLGRFKRLKVSAIYGKSPFYNQEKELKQK 121
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
H+V+ TPGR+ DH++ NTF ++IK+LV+DEAD + M
Sbjct: 122 THVVVGTPGRIIDHIER-NTFDTSKIKYLVIDEADEMLHM 160
>gi|255038837|ref|YP_003089458.1| DEAD/DEAH box helicase [Dyadobacter fermentans DSM 18053]
gi|254951593|gb|ACT96293.1| DEAD/DEAH box helicase domain protein [Dyadobacter fermentans DSM
18053]
Length = 383
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 101/161 (62%), Gaps = 7/161 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DLKL + + Q G TPT IQ IP +L +D +GCA+TG+GKT AFA+P+LQ
Sbjct: 2 TFQDLKLIEPIKKALQEEGYTTPTPIQSKAIPVILETKDLLGCAQTGTGKTAAFAIPMLQ 61
Query: 67 KWCEDPYGIF------ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
E+P G F AL+LTPTRELA QIG+ F G+ +R ++I GG+ Q
Sbjct: 62 LLHENPVGKFERSRIRALILTPTRELAIQIGESFAAYGRYTRVRHTVIFGGVGQKPQTDA 121
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK ++IATPGRL D ++ LN+++F VLDEADR+
Sbjct: 122 LAKGVDVLIATPGRLLDLINQ-GFIKLNQLEFFVLDEADRM 161
>gi|15896005|ref|NP_349354.1| DEAD/DEAH box helicase [Clostridium acetobutylicum ATCC 824]
gi|337737958|ref|YP_004637405.1| DEAD-box ATP dependent DNA helicase [Clostridium acetobutylicum DSM
1731]
gi|384459469|ref|YP_005671889.1| ATP dependent RNA helicase DeaD, superfamily II [Clostridium
acetobutylicum EA 2018]
gi|15025785|gb|AAK80694.1|AE007772_6 ATP dependent RNA helicase DeaD, superfamily II [Clostridium
acetobutylicum ATCC 824]
gi|325510158|gb|ADZ21794.1| ATP dependent RNA helicase DeaD, superfamily II [Clostridium
acetobutylicum EA 2018]
gi|336292304|gb|AEI33438.1| DEAD-box ATP dependent DNA helicase [Clostridium acetobutylicum DSM
1731]
Length = 481
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 101/155 (65%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL L+ +++ + +G K P+ IQ+ +IP +LN +D I AKTGSGKT AFA+P+ +
Sbjct: 5 SFRDLGLSEEILKSIEKLGYKKPSSIQEKVIPVILNGKDIIAKAKTGSGKTAAFAIPVCE 64
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + LVL PTRELAYQI + FL +G+ LR I G + +Q +EL ++ H
Sbjct: 65 KIELEEREPQVLVLAPTRELAYQIKEDFLNIGRFKRLRCISIFGKEPISNQIRELKQRVH 124
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ TPGR+ DH++ T +L ++K+ ++DEAD +
Sbjct: 125 IVVGTPGRVLDHIER-GTLNLEKVKYFIIDEADEM 158
>gi|406973607|gb|EKD96982.1| hypothetical protein ACD_23C01154G0002, partial [uncultured
bacterium]
Length = 475
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 102/163 (62%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L+L L R +G +T T IQ IP VL D +G A+TG+GKT AFALP++Q
Sbjct: 2 AFAQLQLADPLARAVAEMGYETMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFALPLMQ 61
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ +Q + GK NLR +++ GGMDM Q
Sbjct: 62 RMLKHENASTSPARHPVRALVLLPTRELAVQVAEQVELYGKYTNLRSAVVFGGMDMKPQT 121
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 122 IELKKGVEVLVATPGRLLDHIEAKNCV-LNQVEYVVLDEADRM 163
>gi|435852049|ref|YP_007313635.1| DNA/RNA helicase, superfamily II [Methanomethylovorans hollandica
DSM 15978]
gi|433662679|gb|AGB50105.1| DNA/RNA helicase, superfamily II [Methanomethylovorans hollandica
DSM 15978]
Length = 422
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +LK+ L R ++ G TPT IQ IPH+L + D IG A+TG+GKT AF LPILQ
Sbjct: 2 SFENLKIKKTLQRALESEGYITPTPIQAQAIPHLLENRDLIGIAQTGTGKTAAFVLPILQ 61
Query: 67 KWCE--DPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
K E P A LVL PTRELA QIGD F G+ + R +++ GG+ Q K L
Sbjct: 62 KLSETNKPSKSRAPRVLVLAPTRELAAQIGDSFSTYGQFIRFRYTVVFGGVGQGPQVKAL 121
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
A ++IATPGRL D LD + LN ++F VLDEADR+
Sbjct: 122 AHGVDVLIATPGRLLDLLDQGH-VKLNEVEFFVLDEADRM 160
>gi|388567718|ref|ZP_10154148.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
gi|388265047|gb|EIK90607.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
Length = 482
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 103/164 (62%), Gaps = 9/164 (5%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF++L L P L + +G +T T IQ IP VL D +G A+TG+GKT AF+LP+L
Sbjct: 3 QSFSELNLAPALAKAVAEMGYETMTPIQAQAIPQVLTGRDVMGAAQTGTGKTAAFSLPLL 62
Query: 66 QKWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
Q+ + + + ALVL PTRELA Q+ +Q + K LR +++ GGMDM Q
Sbjct: 63 QRLLKHENASTSPARHPVRALVLLPTRELADQVAEQVKLYAKYTQLRSTVVFGGMDMKPQ 122
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 123 TLELKKGVEVLVATPGRLLDHIEAKNCV-LNQVEYVVLDEADRM 165
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/158 (45%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L L+ L+R C+T+G K PT IQ A IP L D A TGSGKT AFALP L+
Sbjct: 171 SFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 230
Query: 67 KWCEDPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P +FA L+LTPTRELA QI L + +++ +I GG+ + +Q L
Sbjct: 231 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQKLAQFTDIKCGLIVGGLSVREQEVVLRS 290
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P IV+ATPGR+ DHL + L+ + L+LDEADRL
Sbjct: 291 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRL 328
>gi|82596351|ref|XP_726226.1| ATP-dependent RNA helicase [Plasmodium yoelii yoelii 17XNL]
gi|23481544|gb|EAA17791.1| putative ATP-dependent RNA helicase [Plasmodium yoelii yoelii]
Length = 492
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF +L ++ WLI+ +++ + PT+IQK +P ++ ++ IG ++TG+GKT+ + +L
Sbjct: 71 ESFEELGIDDWLIKISKSVQIIKPTKIQKLCLPLIIEGKNVIGSSETGTGKTICYCWGML 130
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ ++ YGIF L++ PTREL +QI +QF + G + +++ GG +++Q + + KP
Sbjct: 131 QELNKNFYGIFGLIILPTRELVFQIVEQFHLYGNKIGIKILSCIGGFSLIEQRRNILNKP 190
Query: 126 HIVIATPGRLADHLDTC----NTFSLNRIKFLVLDEADRL 161
HIV+ TPGR++D LD C N F R++FLVLDEAD L
Sbjct: 191 HIVVGTPGRVSDILDDCIDVKNCFK--RLRFLVLDEADLL 228
>gi|347818470|ref|ZP_08871904.1| DEAD/DEAH box helicase domain-containing protein [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 486
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ IP VL+ +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDPYG--------IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + G + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHESGSASPARHPVRALVLLPTRELADQVARQIALYAKHTRLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ NT LN+++++VLDEADR+
Sbjct: 124 IELKKGVEVLVATPGRLLDHIEAKNTV-LNQVEYVVLDEADRM 165
>gi|401827655|ref|XP_003888120.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999320|gb|AFM99139.1| ATP-dependent rRNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 399
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+++ LI C+ G+ PTEIQ+ +IP ++ D I ++TGSGKTLAF LPI+
Sbjct: 3 FDELRVDKSLIEVCEENGIAEPTEIQEQVIPAIVGGSDIIAVSQTGSGKTLAFVLPIVSC 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ LV+ PTREL+ QI + F + LRV ++ GG Q +L+K PH+
Sbjct: 63 LLSKNRSFYCLVIAPTRELSSQIAECFSMFENT-GLRVCLLVGGTSFNVQANQLSKHPHV 121
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADR 160
++ TPGR+A+H+ +F + R++ LVLDEADR
Sbjct: 122 IVGTPGRIAEHILKTKSFKIERVRKLVLDEADR 154
>gi|253745237|gb|EET01285.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 450
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDE--DCIGCAKTGSGKTLAFALPIL 65
F DL + P L+ + IG PT IQK ++ + ++ D +G A+TGSGKT AFA+P L
Sbjct: 3 FRDLGVCPELLDALERIGWVEPTAIQKEMLTVISTNKICDVVGVAETGSGKTGAFAIPAL 62
Query: 66 QKWCE---DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
Q E + G+ +VL+PTRELA Q F LGK LR ++ GG+D++ Q K LA
Sbjct: 63 QDLLERGNNVKGVHTVVLSPTRELAVQTFSVFRDLGKDFGLRTGLVIGGVDLMQQRKILA 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++PH +I TPGRLADHL + FSL I+FL++DEAD++
Sbjct: 123 QQPHALICTPGRLADHLASTEGFSLKSIRFLIIDEADKM 161
>gi|396082239|gb|AFN83849.1| ATP-dependent RNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 397
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+++ LIR C+ G+ PTEIQ+ +IP +L D I ++TGSGKTLAF LPI+
Sbjct: 3 FDELRVDESLIRICEGNGITKPTEIQEQVIPVILGGNDIIAVSQTGSGKTLAFVLPIVSC 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ L++ PTREL+ QI + F + + LRV ++ GG Q +L+K PH+
Sbjct: 63 LLLKDRSFYCLIIAPTRELSSQIAECFNMFEET-GLRVCLLVGGTSFNVQANQLSKHPHV 121
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADR 160
V+ TPGR+A+H+ +F + R++ LVLDEADR
Sbjct: 122 VVGTPGRIAEHVLKTKSFRIERVRKLVLDEADR 154
>gi|297738292|emb|CBI27493.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 87/129 (67%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF DL + L+ C+ +G KTP++IQ IPH L +D IG A+TGSGKT AFALPI
Sbjct: 8 VKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPI 67
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ + P +FA VL+PTRELA QI +QF LG + L+ +++ GG+D Q LAK+
Sbjct: 68 LQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKR 127
Query: 125 PHIVIATPG 133
PHIV+ T G
Sbjct: 128 PHIVVGTLG 136
>gi|378754810|gb|EHY64839.1| hypothetical protein NERG_02242 [Nematocida sp. 1 ERTm2]
Length = 421
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 98/161 (60%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M + K+F + L+ L+ G+ PTEIQK ++ +++N + + + TG+GKTLA+
Sbjct: 1 MPEEKKTFAEYTLDTSLVEALAKKGITQPTEIQKLMLTNLVNRQSILAISNTGTGKTLAY 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
LPI+ +D +A+V+ PTREL+ Q+ +G + LR S++ G D++ QGK
Sbjct: 61 LLPIMHTLLQDDKYFYAMVILPTRELSQQVHAVLADIGAEIGLRTSLLIGATDLLSQGKS 120
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LA +PHIVI TPGR+ HL S++ K+LVLDE DRL
Sbjct: 121 LAARPHIVIGTPGRINHHLRNTKGISVSSFKYLVLDECDRL 161
>gi|392947743|ref|ZP_10313371.1| ATP-dependent RNA helicase [Lactobacillus pentosus KCA1]
gi|334881219|emb|CCB82055.1| ATP-dependent RNA helicase [Lactobacillus pentosus MP-10]
gi|339637663|emb|CCC16621.1| ATP-dependent RNA helicase [Lactobacillus pentosus IG1]
gi|392437023|gb|EIW14919.1| ATP-dependent RNA helicase [Lactobacillus pentosus KCA1]
Length = 526
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FT+L L+ L++ Q G + T IQ IP VL +D IG A+TG+GKT AFALPILQ+
Sbjct: 3 FTELGLSDSLLKAVQRAGYEEATPIQAETIPMVLEGKDVIGQAQTGTGKTAAFALPILQR 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ + I ALV++PTRELA Q ++ LGK +V ++ GG D+ Q + L + P +
Sbjct: 63 LDFNNHNIQALVVSPTRELAIQTQEEIFRLGKDERAKVQVVYGGADIRRQIRNLKQNPQV 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DH+ T L+ +K LVLDEAD +
Sbjct: 123 IVGTPGRLLDHI-RRGTVKLDHVKMLVLDEADEM 155
>gi|402297853|ref|ZP_10817596.1| ATP-dependent RNA helicase [Bacillus alcalophilus ATCC 27647]
gi|401726922|gb|EJT00129.1| ATP-dependent RNA helicase [Bacillus alcalophilus ATCC 27647]
Length = 509
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F + LN ++R + +G T IQ A IP L +D IG A+TG+GKT AF +P+++
Sbjct: 3 TFHEFNLNHQVVRALEDMGFAEATPIQNATIPTTLAGKDVIGQAQTGTGKTGAFGVPLIE 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + L+L PTRELA Q+ + + GK +R ++ GG DM Q ++L +KPH
Sbjct: 63 KINVENDHVQGLILAPTRELANQVSESLVKFGKYKGVRTVVVYGGQDMRKQIRDLKRKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRL DH++ T LN+++ ++LDEAD +
Sbjct: 123 VVVATPGRLMDHMNR-KTIRLNQVETVILDEADEM 156
>gi|445498074|ref|ZP_21464929.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444788069|gb|ELX09617.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 417
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 96/160 (60%), Gaps = 6/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L P LI IG + PT IQ A IP +L ED +G A+TGSGKT AFALP+LQ
Sbjct: 2 SFSSLGLAPSLINAVTEIGYQEPTAIQSAAIPAILRGEDVLGAAQTGSGKTAAFALPLLQ 61
Query: 67 KWCED---PYGIFALVLTPTRELAYQIGDQFLVLGK--VMNLRVSIITGGMDMVDQGKEL 121
++ P + LVL PTRELA Q+G+ L M ++VSI+ GG+ + Q L
Sbjct: 62 ALLDNRSGPRQLHGLVLVPTRELAAQVGESIRKLASHLSMQVKVSIVFGGVSINPQMMAL 121
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRL D +D N ++R LVLDEADRL
Sbjct: 122 RGGADIVVATPGRLLDLID-HNALKISRTAMLVLDEADRL 160
>gi|448820186|ref|YP_007413348.1| ATP-dependent RNA helicase [Lactobacillus plantarum ZJ316]
gi|448273683|gb|AGE38202.1| ATP-dependent RNA helicase [Lactobacillus plantarum ZJ316]
Length = 528
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FT+L L+ L++ G + T IQ IP VL +D IG A+TG+GKT AFALPILQ+
Sbjct: 3 FTELGLSDSLLKAVNRAGYEEATPIQAETIPMVLEGKDVIGQAQTGTGKTAAFALPILQR 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + I ALV++PTRELA Q ++ LGK +V ++ GG D+ Q + L + P +
Sbjct: 63 LDFDNHNIQALVVSPTRELAIQTQEEIFRLGKDERAKVQVVYGGADIRRQIRNLKQNPQV 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DH+ T L+ +K LVLDEAD +
Sbjct: 123 IVGTPGRLLDHI-RRGTVKLDHVKMLVLDEADEM 155
>gi|254555590|ref|YP_003062007.1| ATP-dependent RNA helicase [Lactobacillus plantarum JDM1]
gi|300769652|ref|ZP_07079536.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308179612|ref|YP_003923740.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380031534|ref|YP_004888525.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
gi|418274186|ref|ZP_12889684.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum NC8]
gi|254044517|gb|ACT61310.1| ATP-dependent RNA helicase [Lactobacillus plantarum JDM1]
gi|300492805|gb|EFK27989.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308045103|gb|ADN97646.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342240777|emb|CCC78011.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
gi|376009752|gb|EHS83078.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 528
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FT+L L+ L++ G + T IQ IP VL +D IG A+TG+GKT AFALPILQ+
Sbjct: 3 FTELGLSDSLLKAVNRAGYEEATPIQAETIPMVLEGKDVIGQAQTGTGKTAAFALPILQR 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + I ALV++PTRELA Q ++ LGK +V ++ GG D+ Q + L + P +
Sbjct: 63 LDFDNHNIQALVVSPTRELAIQTQEEIFRLGKDERAKVQVVYGGADIRRQIRNLKQNPQV 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DH+ T L+ +K LVLDEAD +
Sbjct: 123 IVGTPGRLLDHI-RRGTVKLDHVKMLVLDEADEM 155
>gi|114048006|ref|YP_738556.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113889448|gb|ABI43499.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 449
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ TPT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRALSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ N F LN ++ LVLDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKNLF-LNGLELLVLDEADRM 159
>gi|113970779|ref|YP_734572.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113885463|gb|ABI39515.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 449
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ TPT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRALSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ N F LN ++ LVLDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKNLF-LNGLELLVLDEADRM 159
>gi|82915130|ref|XP_728973.1| DEAD/DEAH box helicase [Plasmodium yoelii yoelii 17XNL]
gi|23485712|gb|EAA20538.1| DEAD/DEAH box helicase, putative [Plasmodium yoelii yoelii]
Length = 517
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 99/160 (61%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
++ I SF L + +++ + +G + PT IQ+ ++P V D IG ++TGSGKT F
Sbjct: 104 QNEITSFEQLNICEEVLQSIKELGWEKPTLIQQKVLPIVFQKRDIIGLSETGSGKTACFI 163
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+PILQ+ FAL+++PTREL QI LG + + + I GG+D+V Q L
Sbjct: 164 IPILQELKIKKQSFFALIISPTRELCIQIAQNAQALGSNLLINICTIFGGVDIVTQSLNL 223
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
AKKP+I+I TPGR+ DHL+ F+L +K+L+ DEAD+L
Sbjct: 224 AKKPNIIIGTPGRILDHLNNTKGFNLKNLKYLIFDEADKL 263
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 71/158 (44%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L+R C+T+G K PT IQ A IP L D A TGSGKT AFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 67 KWCEDPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P +FA L+LTPTRELA QI L + +++ +I GG+ + +Q L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P IV+ATPGR+ DHL + L+ + L+LDEADRL
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRL 325
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 71/158 (44%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L+R C+T+G K PT IQ A IP L D A TGSGKT AFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 67 KWCEDPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P +FA L+LTPTRELA QI L + +++ +I GG+ + +Q L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P IV+ATPGR+ DHL + L+ + L+LDEADRL
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRL 325
>gi|319795121|ref|YP_004156761.1| dead/deah box helicase domain-containing protein [Variovorax
paradoxus EPS]
gi|315597584|gb|ADU38650.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus EPS]
Length = 496
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 104/163 (63%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G +T T IQ+ IP VL+ +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K NLR +++ GG+DM Q
Sbjct: 64 RMLKHENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSTVVFGGIDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|167381238|ref|XP_001735636.1| DEAD box ATP-dependent RNA helicase [Entamoeba dispar SAW760]
gi|165902329|gb|EDR28186.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba dispar
SAW760]
Length = 450
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F L + +L+ + G+ PT+IQ+ IP +L+ + +G A+TGSGKT AFALPI
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ DPY FALVLTPTRELA QI DQF V G +N+RV + GG+D++ L+
Sbjct: 89 IHHLSTDPYTGFALVLTPTRELASQIADQFKVFGSCINIRVVQVVGGVDVIRILHHLSGS 148
Query: 125 PHIVIATPGRLA---DHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPG+L DHL FS + KFL+LDEADRL
Sbjct: 149 PHVVIATPGKLVSLIDHL----PFSFDSAKFLILDEADRL 184
>gi|392884823|ref|NP_490891.2| Protein Y71G12B.8 [Caenorhabditis elegans]
gi|373219451|emb|CCD67990.1| Protein Y71G12B.8 [Caenorhabditis elegans]
Length = 739
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF + L+ +++ C G PT IQ+A IP L +D CA TG+GKT AF LPIL+
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P G LVL PTRELA Q+ F L + L V + GG+D+ Q L
Sbjct: 209 RMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRS 268
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P +V+ATPGRL DHL +F+L+ I+ LVLDEADR+
Sbjct: 269 GPDVVVATPGRLIDHLHNSPSFNLSNIEVLVLDEADRM 306
>gi|226468596|emb|CAX69975.1| ATP-dependent rRNA helicase RRP3 [Schistosoma japonicum]
gi|226484750|emb|CAX74284.1| ATP-dependent rRNA helicase RRP3 [Schistosoma japonicum]
Length = 563
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F++L + L + C + K PT IQ IP L + + A+TGSGKT A+ALPI+
Sbjct: 4 KTFSELGIGDELQKACHNLRWKEPTAIQVLSIPPALEGRNLVALAETGSGKTGAYALPII 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA-KK 124
QK ++P+ FALVL PTRELA Q+ QF LGK + L +++ GG+ + Q +
Sbjct: 64 QKLLQNPHPFFALVLAPTRELAAQVQAQFNALGKTIGLSTALLVGGVPITQQSDLMKISP 123
Query: 125 PHIVIATPGRLADHLDTCNTF---SLNRIKFLVLDEADRL 161
PH+VIATPGR DHL F ++ LV+DEADR+
Sbjct: 124 PHVVIATPGRFVDHLKKTKGFDELKFKNLRILVIDEADRM 163
>gi|239816848|ref|YP_002945758.1| DEAD/DEAH box helicase domain-containing protein [Variovorax
paradoxus S110]
gi|239803425|gb|ACS20492.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus S110]
Length = 486
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 104/163 (63%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G +T T IQ+ IP VL+ +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K NLR +++ GG+DM Q
Sbjct: 64 RMLKHENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSTVVFGGIDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|227206264|dbj|BAH57187.1| AT4G16630 [Arabidopsis thaliana]
Length = 617
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/158 (44%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L+R C+T+G K PT IQ A IP L D A TGSGKT AFALP L+
Sbjct: 106 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 165
Query: 67 KWCEDPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P +FA L+LTPTRELA QI L + +++ +I GG+ + +Q L
Sbjct: 166 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 225
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P IV+ATPGR+ DHL + L+ + L+LDEADRL
Sbjct: 226 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRL 263
>gi|326201867|ref|ZP_08191737.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
gi|325987662|gb|EGD48488.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
Length = 481
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 104/160 (65%), Gaps = 5/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI-- 64
SF D KL+ +++ + K+PT++Q+ +IP V+ +D I ++TGSGKT AFA+PI
Sbjct: 4 SFIDYKLSNEILKAISMLNFKSPTKVQEKVIPAVIEKKDIIVKSQTGSGKTAAFAVPICE 63
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L +W E+ ALVLTPTRELA Q+ + +G+ L+VS I G +Q KEL +K
Sbjct: 64 LVEWDENKPQ--ALVLTPTRELAIQVKEDIFNIGRFKRLKVSAIYGKSPFYNQEKELKQK 121
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
H+V+ TPGR+ DH++ NTF + IK+LV+DEAD + M
Sbjct: 122 THVVVGTPGRIIDHIER-NTFDTSNIKYLVIDEADEMLHM 160
>gi|24374367|ref|NP_718410.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
gi|24348927|gb|AAN55854.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
Length = 449
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ TPT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRALSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ N F LN ++ L+LDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKNLF-LNGLELLILDEADRM 159
>gi|303283946|ref|XP_003061264.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457615|gb|EEH54914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 809
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/167 (42%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF DL L+ LIR C +G PT IQ A++P L D G A TGSGKT AF LP+L
Sbjct: 178 ESFNDLNLSRQLIRACTALGYDVPTPIQAAVVPLALTGRDICGRAVTGSGKTAAFMLPLL 237
Query: 66 QKW----CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
++ LVL PTRELA Q+ + L + ++R +++ GG+ Q EL
Sbjct: 238 ERMLHRGARAAAATHVLVLVPTRELAVQVHQMTMRLAQFTSIRAALVVGGLSANTQAAEL 297
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLK 168
+P IV+ATPGRL DH+ ++ L + LVLDEADRL M L+
Sbjct: 298 RTRPEIVVATPGRLIDHVRNTHSVGLEDLAALVLDEADRLLEMGFLE 344
>gi|117921047|ref|YP_870239.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117613379|gb|ABK48833.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 449
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ TPT IQ+ +P L +D + +KTGSGKTLAF LP +Q+
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAMQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRALTKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ N F LN ++ LVLDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKNLF-LNGLELLVLDEADRM 159
>gi|302036818|ref|YP_003797140.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|190343232|gb|ACE75620.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|300604882|emb|CBK41215.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
Length = 431
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L ++P L+R G PT IQ IPH L D +GCA+TG+GKT AF +P+L+
Sbjct: 8 SFDSLGVSPTLLRNLTKAGFAEPTAIQAQAIPHALAGRDVLGCAQTGTGKTAAFVIPMLE 67
Query: 67 KWCEDPYGI-FALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ P G AL+L PTRELA QI LG+ + L + + GG DM Q + L ++P
Sbjct: 68 RLSGTPKGQPRALILAPTRELAIQIQATIDTLGRDLQLFATTVVGGADMQAQVRGLRQRP 127
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL DH+ T SL + LVLDEADR+
Sbjct: 128 DIIVATPGRLLDHM-WNGTISLLAMSILVLDEADRM 162
>gi|387592705|gb|EIJ87729.1| hypothetical protein NEQG_02276 [Nematocida parisii ERTm3]
gi|387595334|gb|EIJ92959.1| hypothetical protein NEPG_02358 [Nematocida parisii ERTm1]
Length = 427
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M++ K+F+ L+ L+ + G+ PTEIQK + ++ N + + + TG+GKTLA+
Sbjct: 1 MQEEKKTFSSYSLDSSLVEELTKRGIIHPTEIQKLTLSNLENRQSLLAISNTGTGKTLAY 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
+LPIL D +A+++ PTREL+ Q+ +G + LR +++ G +D++ QGK
Sbjct: 61 SLPILHSLLNDDRYFYAMIILPTRELSQQVHAVLSDIGAEIGLRTTLLIGAVDLLVQGKS 120
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LA +PHI+I TPGR+ HL +L+ K+LVLDE DRL
Sbjct: 121 LAARPHIIIGTPGRIYHHLRNTKGITLSSFKYLVLDECDRL 161
>gi|342215043|ref|ZP_08707712.1| DEAD/DEAH box helicase [Veillonella sp. oral taxon 780 str. F0422]
gi|341590149|gb|EGS33398.1| DEAD/DEAH box helicase [Veillonella sp. oral taxon 780 str. F0422]
Length = 432
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+KSF L + P LI+ Q +GVK PT IQ+ IP + +D I A+TG+GKTLAF LP+
Sbjct: 1 MKSFQSLGIVPELIQALQKVGVKEPTPIQEKSIPLIFKGQDVIAKAQTGTGKTLAFLLPL 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQ+ D AL++ PTREL QI ++ LG ++ + V + GG + Q ++L ++
Sbjct: 61 LQRIHVDVQQEQALIIAPTRELIQQIAEEARHLGAILGVDVLPLIGGRTIEGQLQKLGRR 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
PH++I TPGRL DH++ T LN I+ +VLDEAD++ M
Sbjct: 121 PHVIIGTPGRLLDHVNR-GTLHLNSIRRVVLDEADQMLHM 159
>gi|398811913|ref|ZP_10570698.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
gi|398079456|gb|EJL70309.1| DNA/RNA helicase, superfamily II [Variovorax sp. CF313]
Length = 487
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 104/163 (63%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G +T T IQ+ IP VL+ +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLMLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K NLR +++ GG+DM Q
Sbjct: 64 RMLKHENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSTVVFGGIDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|114564231|ref|YP_751745.1| DEAD/DEAH box helicase [Shewanella frigidimarina NCIMB 400]
gi|114335524|gb|ABI72906.1| DEAD/DEAH box helicase domain protein [Shewanella frigidimarina
NCIMB 400]
Length = 433
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G ++ T IQ+ IP + ED + A+TG+GKT AFALPILQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQSMTPIQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQR 62
Query: 68 WCEDP-----YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
C++P L+LTPTRELA Q+ D K +NL V I GG+ + Q ++L
Sbjct: 63 MCDNPKETMPSNTRTLILTPTRELAAQVADNISAYSKHLNLTVLTIYGGVKIDTQSQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL +H+ CN SL+ ++FLVLDEADR+
Sbjct: 123 RGADVIVATPGRLLEHIVACN-LSLSNVEFLVLDEADRM 160
>gi|351730076|ref|ZP_08947767.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax
radicis N35]
Length = 498
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 102/163 (62%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ+ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQEQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 IELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|242084812|ref|XP_002442831.1| hypothetical protein SORBIDRAFT_08g003560 [Sorghum bicolor]
gi|241943524|gb|EES16669.1| hypothetical protein SORBIDRAFT_08g003560 [Sorghum bicolor]
Length = 531
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 81/117 (69%)
Query: 45 DCIGCAKTGSGKTLAFALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLR 104
D I A+TGSGKT AFALPILQ E FA VL+PTRELA QI +QF LG + L
Sbjct: 156 DLIALAQTGSGKTAAFALPILQALLEHRRPFFACVLSPTRELAIQIAEQFEALGSAIGLV 215
Query: 105 VSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
S++ GG+D + Q LA+ PHI++ATPGRL DHL FSLN+IK+LVLDEAD L
Sbjct: 216 CSVLVGGVDRMQQVISLARHPHIIVATPGRLLDHLTDTKGFSLNKIKYLVLDEADVL 272
>gi|389585003|dbj|GAB67734.1| DEAD/DEAH box helicase domain containing protein, partial
[Plasmodium cynomolgi strain B]
Length = 402
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F +L + WL++ +T+ + PT+IQ+ +P ++ + IG ++TG+GKT+ +
Sbjct: 60 PPVTFEELGVEDWLVKISKTVQISHPTKIQQLCLPLIMKGYNVIGTSETGTGKTICYCWG 119
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQ+ ++ YG+FALVL PTREL Q+ +QFL+ G + +++ GG +++Q + +
Sbjct: 120 ILQELNKNSYGVFALVLLPTRELVVQVVEQFLLYGYRIGIKILSCIGGSSLIEQRRRVLA 179
Query: 124 KPHIVIATPGRLADHLDTCNTFS--LNRIKFLVLDEADRL 161
KPH+V+ TPGR +D +D C R++F VLDEAD L
Sbjct: 180 KPHVVVGTPGRTSDIIDNCEDVRNCFKRLRFFVLDEADLL 219
>gi|407803800|ref|ZP_11150632.1| ATP-dependent RNA helicase [Alcanivorax sp. W11-5]
gi|407022210|gb|EKE33965.1| ATP-dependent RNA helicase [Alcanivorax sp. W11-5]
Length = 586
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 71/159 (44%), Positives = 102/159 (64%), Gaps = 3/159 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L+L+P + + + +G +TP+ IQ+AIIPH+L D IG A+TG+GKT AFALP++ +
Sbjct: 11 FDALELSPTVKQAIRALGYQTPSAIQQAIIPHILEGRDVIGQAQTGTGKTAAFALPLISR 70
Query: 68 WCEDPYG-IFALVLTPTRELAYQIGDQFLVLG-KVMNLRVSIITGGMDMVDQGKELAKKP 125
+ + P G + LVL PTRELA Q+ + F G + +LRV + GGMD Q + L +
Sbjct: 71 FGDAPAGAVQVLVLAPTRELALQVTESFEKYGQQTPSLRVVTLCGGMDYRPQTRALREGV 130
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
+VI TPGR+ DHL T L+ ++ LVLDEAD + M
Sbjct: 131 QVVIGTPGRVVDHLKR-GTLKLDALRCLVLDEADEMLRM 168
>gi|357459393|ref|XP_003599977.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355489025|gb|AES70228.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 828
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L+ L+R C+ +G PT IQ A IP L D G A TGSGKT AFALP L+
Sbjct: 152 SFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLE 211
Query: 67 KWCEDP---YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P + I L+LTPTRELA Q+ L + ++R +I GG+ +Q L
Sbjct: 212 RLLFRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFTDIRCCLIVGGLSTKEQEVALRS 271
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+P IV+ATPGR+ DHL + L+ + L+LDEADRL
Sbjct: 272 RPDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRL 309
>gi|339449340|ref|ZP_08652896.1| DEAD/DEAH box helicase domain-containing protein [Lactobacillus
fructivorans KCTC 3543]
Length = 496
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL L+ L++ + G PT IQ IP +L +D IG A+TG+GKT AFALPILQ+
Sbjct: 3 FKDLGLSDSLLKAIEKSGFDEPTPIQAQTIPLLLKGQDVIGQAQTGTGKTAAFALPILQE 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ + ALV++PTRELA Q + LG V RV ++ GG D+ Q ++L K P I
Sbjct: 63 IDLNNPDVQALVISPTRELAIQTQKEMQRLGGVEGARVQVVYGGSDIRQQIRDLKKTPQI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ T L +K+LVLDEAD +
Sbjct: 123 VVGTPGRILDHINR-RTLKLGHVKYLVLDEADEM 155
>gi|431795901|ref|YP_007222805.1| DNA/RNA helicase [Echinicola vietnamensis DSM 17526]
gi|430786666|gb|AGA76795.1| DNA/RNA helicase, superfamily II [Echinicola vietnamensis DSM
17526]
Length = 416
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 7/160 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F DL++ P +++ + G PT IQ IPH+L D +GCA+TG+GKT AFA+PI+Q
Sbjct: 3 FKDLRIIPPILKALEDKGYDEPTSIQAQAIPHILEGRDVLGCAQTGTGKTAAFAIPIIQH 62
Query: 68 WCEDPYG------IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
E PY I +L++TPTRELA QIG+ K N+ ++I GG+ Q +L
Sbjct: 63 IHEAPYANEPWAKIRSLIVTPTRELAIQIGENIDEYAKNTNVSHTVIFGGVKQGAQVAQL 122
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K HI++ATPGRL D +D + SL I VLDEADR+
Sbjct: 123 KKGVHILVATPGRLLDLIDQGH-ISLKAIDLFVLDEADRM 161
>gi|308497817|ref|XP_003111095.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
gi|308240643|gb|EFO84595.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
Length = 749
Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF + L+ +++ C G PT IQ+A IP L+ +D CA TG+GKT AF LPIL+
Sbjct: 156 SFEQMNLSRQILKACAGAGYTDPTPIQQACIPVALSGKDICACAATGTGKTAAFVLPILE 215
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P G LVL PTRELA Q+ F L + L V + GG+D+ Q L
Sbjct: 216 RMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRS 275
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P +V+ATPGRL DHL F+L I+ LVLDEADR+
Sbjct: 276 GPDVVVATPGRLIDHLHNSPNFNLGSIEVLVLDEADRM 313
>gi|256083560|ref|XP_002578010.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350644826|emb|CCD60457.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 592
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 103/167 (61%), Gaps = 13/167 (7%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+DL L L CQ + +PT+IQ IP L +D +G A+TGSGKT AF LPI+Q
Sbjct: 2 TFSDLGLIKELCSVCQRMKWDSPTKIQVNSIPFALEGKDIVGIAETGSGKTGAFLLPIIQ 61
Query: 67 KWCE--DPYGIFALVLTPTRELAYQIGDQFLVLGKV------MNLRVSIITGGMDMVDQG 118
W + P G FAL+L PTRELA Q+ ++ LG+ +L V ++ GG DMVDQ
Sbjct: 62 HWIKFGQPVG-FALILAPTRELAQQLANEAERLGQYKTDELEFHLEVILLVGGEDMVDQA 120
Query: 119 KELA-KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+LA +K H ++ATPGRL DHL F+ L+ I LVLDEADR+
Sbjct: 121 LKLAWRKHHFIVATPGRLIDHLKQSQNFAAQQLSNIHHLVLDEADRM 167
>gi|365097957|ref|ZP_09331724.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
gi|363413202|gb|EHL20410.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
Length = 505
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 IELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|259500990|ref|ZP_05743892.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
iners DSM 13335]
gi|302190561|ref|ZP_07266815.1| DEAD-box ATP-dependent RNA helicase [Lactobacillus iners AB-1]
gi|309803755|ref|ZP_07697841.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 11V1-d]
gi|309804668|ref|ZP_07698733.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 09V1-c]
gi|309806978|ref|ZP_07700960.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 03V1-b]
gi|309808565|ref|ZP_07702461.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 01V1-a]
gi|309809614|ref|ZP_07703471.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners SPIN
2503V10-D]
gi|312871555|ref|ZP_07731648.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
3008A-a]
gi|312872588|ref|ZP_07732656.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
2062A-h1]
gi|312874281|ref|ZP_07734313.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
2052A-d]
gi|312874733|ref|ZP_07734752.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
2053A-b]
gi|315653950|ref|ZP_07906866.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
iners ATCC 55195]
gi|325912398|ref|ZP_08174793.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners UPII
143-D]
gi|325913097|ref|ZP_08175467.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners UPII
60-B]
gi|329920540|ref|ZP_08277272.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners SPIN
1401G]
gi|349611847|ref|ZP_08891077.1| hypothetical protein HMPREF1027_00504 [Lactobacillus sp. 7_1_47FAA]
gi|259167684|gb|EEW52179.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
iners DSM 13335]
gi|308164164|gb|EFO66425.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 11V1-d]
gi|308166060|gb|EFO68278.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 09V1-c]
gi|308166598|gb|EFO68795.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 03V1-b]
gi|308168193|gb|EFO70315.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners
LactinV 01V1-a]
gi|308170095|gb|EFO72131.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners SPIN
2503V10-D]
gi|311089478|gb|EFQ47903.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
2053A-b]
gi|311090154|gb|EFQ48566.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
2052A-d]
gi|311091950|gb|EFQ50326.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
2062A-h1]
gi|311092950|gb|EFQ51301.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners LEAF
3008A-a]
gi|315488646|gb|EFU78292.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
iners ATCC 55195]
gi|325475740|gb|EGC78911.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners UPII
143-D]
gi|325477518|gb|EGC80660.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners UPII
60-B]
gi|328936216|gb|EGG32669.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus iners SPIN
1401G]
gi|348608312|gb|EGY58297.1| hypothetical protein HMPREF1027_00504 [Lactobacillus sp. 7_1_47FAA]
Length = 487
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F++L L P L++ + G + T IQ+ IP VL+ +D IG A+TG+GKT AF LPILQ
Sbjct: 3 FSELNLKPELLKAIKRAGFEEATPIQEKTIPLVLSGKDVIGQAQTGTGKTAAFGLPILQT 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ GI AL++ PTRELA Q ++ LG+ N V ++ GG D+ Q + L + P+I
Sbjct: 63 LDKKQEGIQALIIEPTRELAIQTQEELFRLGRDENAHVQVVYGGADIRRQIRSLKQVPNI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DHL T +L+ +K ++LDEAD +
Sbjct: 123 LVGTPGRLLDHL-KRRTINLSHLKHVILDEADEM 155
>gi|366166094|ref|ZP_09465849.1| DEAD/DEAH box helicase domain-containing protein [Acetivibrio
cellulolyticus CD2]
Length = 481
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 103/160 (64%), Gaps = 5/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI-- 64
SF + KL+ L++ + K+PT++Q+ +IP VL +D I ++TGSGKT AFA+PI
Sbjct: 5 SFENYKLSSELLKAIDMLNYKSPTKVQEMVIPAVLEHKDVIVKSQTGSGKTAAFAIPICD 64
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L W E+ + LV+TPTRELA Q+ + LG+ L+VS I G +Q KEL +K
Sbjct: 65 LVDWDENKPQV--LVITPTRELAIQVKEDIFNLGRFKRLKVSAIYGRSSFYNQEKELKQK 122
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
H+V+ TPGR+ DHL+ TF ++IK+L++DEAD + M
Sbjct: 123 THVVVGTPGRIIDHLER-GTFDTSKIKYLIIDEADEMLSM 161
>gi|408790661|ref|ZP_11202276.1| Cold-shock DEAD-box protein A [Lactobacillus florum 2F]
gi|408520002|gb|EKK20106.1| Cold-shock DEAD-box protein A [Lactobacillus florum 2F]
Length = 490
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 93/155 (60%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL L+ L+ G + PT IQ IP L ED IG A+TG+GKT AFALPILQ
Sbjct: 2 NFQDLGLSDSLLAAVAKNGYEEPTAIQAQTIPLTLQGEDVIGQAQTGTGKTAAFALPILQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
D + AL+++PTRELA Q ++ LG+ R ++ GG D+ Q +L K P
Sbjct: 62 GIDVDDPNVQALIISPTRELAIQTQNELQKLGRSEGARAQVVYGGSDIRRQIYDLKKHPQ 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ TPGRL DH+ T L+ +KFLVLDEAD +
Sbjct: 122 VIVGTPGRLLDHIQR-RTLKLDHVKFLVLDEADEM 155
>gi|395003518|ref|ZP_10387653.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
gi|394318531|gb|EJE54950.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
Length = 499
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 IELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|384249200|gb|EIE22682.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 662
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F+DL L+ L++ C +G PT IQ A IP L D G A TGSGKT AFALP+L+
Sbjct: 118 AFSDLHLSRPLLKACTALGYINPTPIQAACIPLALAGRDICGSAITGSGKTAAFALPLLE 177
Query: 67 KWCEDPYGI---FALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ I + LVLTPTRELA Q+ L + ++R++++ GG+ + Q L
Sbjct: 178 RLLFRNRRIAATYGLVLTPTRELAVQVHSMITNLAQFTDIRIALVVGGLSLQVQSATLRT 237
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
P +V+ATPGRL DHL + L ++ LVLDEADRL M
Sbjct: 238 SPEVVVATPGRLIDHLRNTQSVGLEDLQALVLDEADRLLQM 278
>gi|347534130|ref|YP_004840800.1| DEAD/DEAH box helicase [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504186|gb|AEN98868.1| DEAD-box ATP-dependent RNA helicase cshA [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 505
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 93/155 (60%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL L+ L++ G PT IQ IP L ED IG A+TG+GKT AFALPILQ
Sbjct: 16 NFKDLGLSDSLLKAVADNGYAEPTAIQTETIPLTLKGEDVIGQAQTGTGKTAAFALPILQ 75
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ + ALV++PTRELA Q + LG+ +R ++ GG D+ Q +L KKP
Sbjct: 76 GIDVNDPNVQALVISPTRELAIQTQKEIQKLGRGEGVRAQVVYGGSDIRKQIYDLKKKPQ 135
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGRL DH+ T L +KFLVLDEAD +
Sbjct: 136 IIVGTPGRLLDHIKR-RTLKLEHVKFLVLDEADEM 169
>gi|223982748|ref|ZP_03632977.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
gi|223965288|gb|EEF69571.1| hypothetical protein HOLDEFILI_00251 [Holdemania filiformis DSM
12042]
Length = 424
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L ++P +++ CQ +G TPT+IQ+ IP VL D +G A+TG+GKT AFALPIL +
Sbjct: 3 FNELPIHPSILKNCQRMGYTTPTKIQQKAIPPVLEGRDLLGLAQTGTGKTAAFALPILDQ 62
Query: 68 WCEDPY----GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P I ALVLTPTRELA QI D F + G+ + L+ +I GG+ Q +L K
Sbjct: 63 LMKQPQKGKRAIKALVLTPTRELAIQIVDNFQLYGQGLPLKTVVIFGGVKQGAQVDQLKK 122
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL D L L++++ VLDEADR+
Sbjct: 123 GADILIATPGRLLD-LVGQRLLDLSQVEIFVLDEADRM 159
>gi|334340716|ref|YP_004545696.1| DEAD/DEAH box helicase [Desulfotomaculum ruminis DSM 2154]
gi|334092070|gb|AEG60410.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum ruminis DSM
2154]
Length = 482
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ L++ +G + T IQ+ IP L D IG A TG+GKT AF +P+++K
Sbjct: 4 FYELGLSESLLQALANMGFEEATPIQEKTIPVALQQRDLIGQAHTGTGKTAAFGVPMVEK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ E+ + LV+TPTRELA Q+ ++ +G++ +R I GG D+ Q K L K+PHI
Sbjct: 64 FEEEADRVQGLVITPTRELAVQVAEELNRIGQIKGIRTLPIYGGQDINRQIKALKKRPHI 123
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DH+D T L IK +VLDEAD +
Sbjct: 124 IVGTPGRLMDHMDR-RTLRLQGIKMVVLDEADEM 156
>gi|260223394|emb|CBA33917.1| Putative ATP-dependent RNA helicase rhlE [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 520
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 9/166 (5%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F L+L L R +G T T IQ IP VL +D +G A+TG+GKT AFALP
Sbjct: 20 PTMAFAQLQLADPLARAVAEMGYTTMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFALP 79
Query: 64 ILQKWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMV 115
+LQ+ + + + ALVL PTRELA Q+ Q + K NLR +++ GGMDM
Sbjct: 80 LLQRLMKHENASTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSAVVFGGMDMK 139
Query: 116 DQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
Q EL +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 140 PQTLELKAGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 184
>gi|329960847|ref|ZP_08299126.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
gi|328532133|gb|EGF58937.1| ATP-dependent RNA helicase RhlE [Bacteroides fluxus YIT 12057]
Length = 423
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 3/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +LKL +++ Q G TPT IQ+ IP +L +D +GCA+TG+GKT AF++PILQ
Sbjct: 2 TFENLKLIEPILKALQEEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 67 KW--CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
K ++ GI AL+LTPTRELA QIG+ F G+ LR ++I GG+ Q EL +
Sbjct: 62 KLYKTDNRKGIKALILTPTRELAIQIGESFEAYGRYTGLRHTVIFGGVGQKPQTDELKRG 121
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL D L +L + F VLDEADR+
Sbjct: 122 VQILVATPGRLQD-LVNQGFINLKALDFFVLDEADRM 157
>gi|449704799|gb|EMD44971.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba
histolytica KU27]
Length = 450
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F L + +L+ + G+ PT+IQ+ IP +L+ + +G A+TGSGKT AFALPI
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ DPY FALVLTPTRELA QI DQF G +N+RV + GG+D++ L+
Sbjct: 89 IHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDVIRILHHLSGS 148
Query: 125 PHIVIATPGRLA---DHLDTCNTFSLNRIKFLVLDEADRL 161
PH++IATPG+L DHL FS + KFL+LDEADRL
Sbjct: 149 PHVIIATPGKLVSLIDHL----PFSFDSAKFLILDEADRL 184
>gi|407043080|gb|EKE41729.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 450
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F L + +L+ + G+ PT+IQ+ IP +L+ + +G A+TGSGKT AFALPI
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ DPY FALVLTPTRELA QI DQF G +N+RV + GG+D++ L+
Sbjct: 89 IHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDVIRILHHLSGS 148
Query: 125 PHIVIATPGRLA---DHLDTCNTFSLNRIKFLVLDEADRL 161
PH++IATPG+L DHL FS + KFL+LDEADRL
Sbjct: 149 PHVIIATPGKLVSLIDHL----PFSFDSAKFLILDEADRL 184
>gi|67484682|ref|XP_657561.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56474830|gb|EAL52186.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 450
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ +F L + +L+ + G+ PT+IQ+ IP +L+ + +G A+TGSGKT AFALPI
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+ DPY FALVLTPTRELA QI DQF G +N+RV + GG+D++ L+
Sbjct: 89 IHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDVIRILHHLSGS 148
Query: 125 PHIVIATPGRLA---DHLDTCNTFSLNRIKFLVLDEADRL 161
PH++IATPG+L DHL FS + KFL+LDEADRL
Sbjct: 149 PHVIIATPGKLVSLIDHL----PFSFDSAKFLILDEADRL 184
>gi|67967779|dbj|BAE00372.1| unnamed protein product [Macaca fascicularis]
Length = 764
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 187 SFQDMNLSRPLLKAITAMGFKQPTSIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 246
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + N+ + GG+D+ Q L
Sbjct: 247 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRA 306
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 307 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 344
>gi|241767199|ref|ZP_04764950.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
gi|241362168|gb|EER58246.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
Length = 489
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|229188506|ref|ZP_04315550.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus ATCC
10876]
gi|228594969|gb|EEK52744.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus ATCC
10876]
Length = 528
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|229028084|ref|ZP_04184235.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH1271]
gi|228733237|gb|EEL84068.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH1271]
Length = 527
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|229159401|ref|ZP_04287421.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus R309803]
gi|228624068|gb|EEK80874.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus R309803]
Length = 528
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|218895359|ref|YP_002443770.1| DEAD/DEAH box helicase [Bacillus cereus G9842]
gi|228906018|ref|ZP_04069910.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
IBL 200]
gi|228937529|ref|ZP_04100171.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228970416|ref|ZP_04131071.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228976986|ref|ZP_04137394.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
Bt407]
gi|384184309|ref|YP_005570205.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402562678|ref|YP_006605402.1| ATP-dependent RNA helicase [Bacillus thuringiensis HD-771]
gi|410672597|ref|YP_006924968.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus thuringiensis
Bt407]
gi|423364241|ref|ZP_17341734.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD022]
gi|423526472|ref|ZP_17502917.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB1-1]
gi|423565415|ref|ZP_17541691.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MSX-A1]
gi|452196603|ref|YP_007476684.1| Cold-shock DEAD-box protein A [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|218543277|gb|ACK95671.1| DEAD/DEAH box helicase [Bacillus cereus G9842]
gi|228782733|gb|EEM30903.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
Bt407]
gi|228789302|gb|EEM37226.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228822140|gb|EEM68126.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228853621|gb|EEM98386.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
IBL 200]
gi|326938018|gb|AEA13914.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401073132|gb|EJP81571.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD022]
gi|401193994|gb|EJR00992.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MSX-A1]
gi|401791330|gb|AFQ17369.1| ATP-dependent RNA helicase [Bacillus thuringiensis HD-771]
gi|402456266|gb|EJV88042.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB1-1]
gi|409171726|gb|AFV16031.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus thuringiensis
Bt407]
gi|452101996|gb|AGF98935.1| Cold-shock DEAD-box protein A [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 529
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|75760678|ref|ZP_00740704.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228898976|ref|ZP_04063254.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
IBL 4222]
gi|423387287|ref|ZP_17364541.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG1X1-2]
gi|434378873|ref|YP_006613517.1| DEAD/DEAH box helicase [Bacillus thuringiensis HD-789]
gi|74491828|gb|EAO55018.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228860669|gb|EEN05051.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
IBL 4222]
gi|401629250|gb|EJS47075.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG1X1-2]
gi|401877430|gb|AFQ29597.1| DEAD/DEAH box helicase [Bacillus thuringiensis HD-789]
Length = 521
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|251796178|ref|YP_003010909.1| DEAD/DEAH box helicase [Paenibacillus sp. JDR-2]
gi|247543804|gb|ACT00823.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. JDR-2]
Length = 578
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/157 (44%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F + + P L Q+ G+ +PT +QK IP +L+ +D I A+TG+GKT+AF LPILQ+
Sbjct: 5 FISMGIIPELTDVLQSNGITSPTPVQKKAIPVLLSGQDVIAQAQTGTGKTIAFTLPILQR 64
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + AL+LTPTRELA QI + L + +V GG D+ Q ++L PHI
Sbjct: 65 IDIDKEQVQALILTPTRELAIQITSELKKLAAAVGAKVLAAYGGQDVDAQIRKLNNSPHI 124
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
V+ATPGRL DH+ T +L ++K LVLDEAD++ M
Sbjct: 125 VVATPGRLIDHMRR-ETINLGKLKMLVLDEADQMLHM 160
>gi|113971144|ref|YP_734937.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113885828|gb|ABI39880.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 433
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MAENPSETLKSNARVLILTPTRELAAQVADNVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I++ATPGRL +HL CN SL+ I FLVLDEADR+
Sbjct: 123 RGADIIVATPGRLLEHLTACN-LSLSSIDFLVLDEADRM 160
>gi|15896262|ref|NP_349611.1| ATP-dependent RNA [Clostridium acetobutylicum ATCC 824]
gi|337738217|ref|YP_004637664.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
gi|384459728|ref|YP_005672148.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|15026068|gb|AAK80951.1|AE007798_3 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis
ortholog [Clostridium acetobutylicum ATCC 824]
gi|325510417|gb|ADZ22053.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|336293434|gb|AEI34568.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
Length = 528
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 101/158 (63%), Gaps = 3/158 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K F+DLKLN +++ +G + P++IQ IP V++ D IG A+TG+GKT+AF PI+
Sbjct: 4 KKFSDLKLNSSVLKAIDDMGFEEPSKIQAEAIPVVIDGYDMIGQAQTGTGKTVAFGAPII 63
Query: 66 QKW--CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
K ++ G+ A++LTPTRELA QI D+ L K +RV I GG + Q + + +
Sbjct: 64 SKIKDIDEKEGVQAIILTPTRELAIQITDELTRLSKYARVRVLPIYGGQSIERQMRAIKR 123
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGR+ DH+ T L+++KFLVLDEAD +
Sbjct: 124 GVDVIVATPGRIMDHI-KRKTVKLDKVKFLVLDEADEM 160
>gi|423614480|ref|ZP_17590337.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD107]
gi|401237929|gb|EJR44375.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD107]
Length = 533
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|423405051|ref|ZP_17382224.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG2X1-2]
gi|423479888|ref|ZP_17456602.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6X1-1]
gi|401645694|gb|EJS63344.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG2X1-2]
gi|402424280|gb|EJV56466.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6X1-1]
Length = 527
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|229171082|ref|ZP_04298680.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus MM3]
gi|228612412|gb|EEK69636.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus MM3]
Length = 530
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|291409987|ref|XP_002721272.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Oryctolagus
cuniculus]
Length = 789
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 213 SFQDMNLSRPLLKAISAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 272
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + ++ + GG+D+ Q L
Sbjct: 273 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRA 332
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F LN I+ L+LDEADR+
Sbjct: 333 APDILIATPGRLIDHLHNCPSFHLNSIEVLILDEADRM 370
>gi|407940452|ref|YP_006856093.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
gi|407898246|gb|AFU47455.1| DEAD/DEAH box helicase [Acidovorax sp. KKS102]
Length = 490
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 IELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|157960747|ref|YP_001500781.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157845747|gb|ABV86246.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 432
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T IQ+ IP V +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFAPEILRAISECGYEKMTPIQQQAIPAVRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPY-----GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
++P AL+LTPTRELA QI D K ++L+V + GG+ M Q +L
Sbjct: 63 MLDNPSTTGRSNARALILTPTRELAAQIADNINDYAKYLDLKVVTVYGGVKMDSQATKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I+IATPGRL +H+ CN SL+ + FLVLDEADR+
Sbjct: 123 RGADIIIATPGRLLEHIIACN-LSLSNVDFLVLDEADRM 160
>gi|251778083|ref|ZP_04821003.1| cold-shock deAd box protein a [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243082398|gb|EES48288.1| cold-shock deAd box protein a [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 367
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L +N ++ G+KTPT IQ+ IP +L+ +D IG AKTG+GKTLAF LPI Q
Sbjct: 2 NFKSLGINENIVNILNKNGIKTPTAIQEESIPKILSGKDVIGEAKTGTGKTLAFLLPIFQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
D G L+L+PTRELA QI ++ L ++ + GG D+ Q K+L H
Sbjct: 62 NISPDTNGTQVLILSPTRELAIQITEETKKLNVNNDINILAAYGGKDIGSQLKKLKHNVH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
+VIATPGRL DH+D T L+++K +V+DEAD++ LM
Sbjct: 122 LVIATPGRLLDHIDR-KTIDLSKLKTIVIDEADQMLLM 158
>gi|392531372|ref|ZP_10278509.1| ATP-dependent RNA helicase; cold shock [Carnobacterium
maltaromaticum ATCC 35586]
gi|414082690|ref|YP_006991393.1| DEAD/DEAH box helicase [Carnobacterium maltaromaticum LMA28]
gi|412996269|emb|CCO10078.1| DEAD/DEAH box helicase family protein [Carnobacterium
maltaromaticum LMA28]
Length = 541
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F++L L+P L++ + +G + T IQ+ IP L +D IG A+TG+GKT AF LP+LQK
Sbjct: 3 FSELGLDPELLQSVERLGFEEATPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPMLQK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ LV+ PTRELA Q ++ L + +RV ++ GG D+ Q + L +PHI
Sbjct: 63 IDLKNRAVQGLVIAPTRELAIQTQEELFRLSRDKKVRVQVVYGGADISRQIRSLKDQPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGRL DH++ T L++++ LVLDEAD +
Sbjct: 123 VVGTPGRLLDHINR-RTLKLDQVETLVLDEADEM 155
>gi|188588593|ref|YP_001920789.1| cold-shock deAd box protein a [Clostridium botulinum E3 str. Alaska
E43]
gi|188498874|gb|ACD52010.1| cold-shock deAd box protein a [Clostridium botulinum E3 str. Alaska
E43]
Length = 367
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L +N ++ G+KTPT IQ+ IP +L+ +D IG AKTG+GKTLAF LPI Q
Sbjct: 2 NFKSLGINENIVNILNKNGIKTPTAIQEESIPKILSGKDVIGEAKTGTGKTLAFLLPIFQ 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
D G L+L+PTRELA QI ++ L ++ + GG D+ Q K+L H
Sbjct: 62 NISPDTNGTQVLILSPTRELAIQITEETKKLNVNNDINILAAYGGKDIGSQLKKLKHNVH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
+VIATPGRL DH+D T L+++K +V+DEAD++ LM
Sbjct: 122 LVIATPGRLLDHIDR-KTIDLSKLKTIVIDEADQMLLM 158
>gi|423515083|ref|ZP_17491564.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuA2-4]
gi|401168046|gb|EJQ75314.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuA2-4]
Length = 540
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ LGK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKDAVQGIVIAPTRELAIQVGEELYKLGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|423370478|ref|ZP_17347885.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD142]
gi|401073949|gb|EJP82358.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD142]
Length = 542
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ LGK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKDAVQGIVIAPTRELAIQVGEELYKLGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|163938237|ref|YP_001643121.1| DEAD/DEAH box helicase [Bacillus weihenstephanensis KBAB4]
gi|229131241|ref|ZP_04260147.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-ST196]
gi|423514499|ref|ZP_17491006.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuA2-1]
gi|163860434|gb|ABY41493.1| DEAD/DEAH box helicase domain protein [Bacillus weihenstephanensis
KBAB4]
gi|228652232|gb|EEL08163.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-ST196]
gi|402442074|gb|EJV74016.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuA2-1]
Length = 538
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ LGK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKDAVQGIVIAPTRELAIQVGEELYKLGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|395829165|ref|XP_003787731.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Otolemur garnettii]
Length = 795
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 218 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 277
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + N+ + GG+D+ Q L
Sbjct: 278 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRA 337
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 338 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 375
>gi|109091647|ref|XP_001099400.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Macaca
mulatta]
gi|355563050|gb|EHH19612.1| Putative ATP-dependent RNA helicase DDX27 [Macaca mulatta]
gi|355784407|gb|EHH65258.1| Putative ATP-dependent RNA helicase DDX27 [Macaca fascicularis]
Length = 763
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 186 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 245
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + N+ + GG+D+ Q L
Sbjct: 246 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRA 305
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 306 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 343
>gi|423398827|ref|ZP_17376028.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG2X1-1]
gi|423409729|ref|ZP_17386878.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG2X1-3]
gi|401646011|gb|EJS63645.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG2X1-1]
gi|401652844|gb|EJS70396.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG2X1-3]
Length = 531
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|319902651|ref|YP_004162379.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417682|gb|ADV44793.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 422
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 3/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +LKL +++ Q G TPT IQ+ IP +L +D +GCA+TG+GKT AF++PILQ
Sbjct: 2 TFENLKLIEPILKALQEEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 67 KW--CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
K ++ GI AL+LTPTRELA QIG+ F GK L+ ++I GG+ Q +L +
Sbjct: 62 KLYKTDNRKGIKALILTPTRELAIQIGESFEAYGKYTGLKHTVIFGGVGQKPQTDDLKRG 121
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I+IATPGRL D L +L + F VLDEADR+
Sbjct: 122 TQILIATPGRLQD-LVNQGFINLKTLDFFVLDEADRM 157
>gi|423525845|ref|ZP_17502297.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuA4-10]
gi|401165636|gb|EJQ72953.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuA4-10]
Length = 533
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|73992237|ref|XP_534451.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Canis lupus familiaris]
Length = 765
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 186 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 245
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + N+ + GG+D+ Q L
Sbjct: 246 RLIYKPRQSPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEAALRA 305
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 306 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 343
>gi|414586362|tpg|DAA36933.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 842
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 26/184 (14%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLN-DEDCIGCAKTGSGKTLAF 60
ED + ++ +L+L+P L++ + +G K PT IQK+ P + +D IG A+TGSGKTLAF
Sbjct: 205 EDDVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTLAF 264
Query: 61 ALPILQKW---------------------CEDPYGIFALVLTPTRELAYQIGDQFLVLGK 99
LP+LQ+ C P + AL+LTPTRELA Q+ D + K
Sbjct: 265 GLPVLQRLLEEREKATRLQQEDEKMEERSCGSP--LRALILTPTRELAKQVCDHLKDVAK 322
Query: 100 VMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNT--FSLNRIKFLVLDE 157
+ + V I GG+ M Q + L KKP IV+ TPGRL +H+ N L+ + F +LDE
Sbjct: 323 FLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILDE 382
Query: 158 ADRL 161
ADR+
Sbjct: 383 ADRM 386
>gi|410953778|ref|XP_003983547.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Felis catus]
Length = 920
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 342 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 401
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + N+ + GG+D+ Q L
Sbjct: 402 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEAALRA 461
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 462 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 499
>gi|293332967|ref|NP_001169277.1| uncharacterized protein LOC100383140 [Zea mays]
gi|224028341|gb|ACN33246.1| unknown [Zea mays]
Length = 842
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 26/184 (14%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLN-DEDCIGCAKTGSGKTLAF 60
ED + ++ +L+L+P L++ + +G K PT IQK+ P + +D IG A+TGSGKTLAF
Sbjct: 205 EDDVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTLAF 264
Query: 61 ALPILQKW---------------------CEDPYGIFALVLTPTRELAYQIGDQFLVLGK 99
LP+LQ+ C P + AL+LTPTRELA Q+ D + K
Sbjct: 265 GLPVLQRLLEEREKATRLQQEDEKMEERSCGSP--LRALILTPTRELAKQVCDHLKDVAK 322
Query: 100 VMNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNT--FSLNRIKFLVLDE 157
+ + V I GG+ M Q + L KKP IV+ TPGRL +H+ N L+ + F +LDE
Sbjct: 323 FLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILDE 382
Query: 158 ADRL 161
ADR+
Sbjct: 383 ADRM 386
>gi|332529740|ref|ZP_08405694.1| DEAD/DEAH box helicase-like protein [Hylemonella gracilis ATCC
19624]
gi|332040761|gb|EGI77133.1| DEAD/DEAH box helicase-like protein [Hylemonella gracilis ATCC
19624]
Length = 506
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 101/164 (61%), Gaps = 9/164 (5%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K + DL L L R +G +T T IQ IP VL +D +G A+TG+GKT AF+LP+L
Sbjct: 18 KRYADLTLAEPLKRAVADMGYETMTPIQAQAIPVVLAGQDVMGAAQTGTGKTAAFSLPLL 77
Query: 66 QKWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQ 117
Q+ + + + ALVL PTRELA Q+ Q + K +LR +++ GGMDM Q
Sbjct: 78 QRLLKHENASTSPARHPVRALVLLPTRELADQVAQQVKMYAKYTHLRSAVVFGGMDMKPQ 137
Query: 118 GKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 138 TLELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 180
>gi|212557425|gb|ACJ29879.1| ATP-dependent RNA helicase, DEAD box family [Shewanella
piezotolerans WP3]
Length = 447
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 97/162 (59%), Gaps = 11/162 (6%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
FTD L+ L++ + +G+ TPTEIQ+ IP L +D + +KTGSGKTLAF LP +Q
Sbjct: 2 QFTDFSLDQRLLQTLKHMGIDTPTEIQEQAIPIALAGKDLMASSKTGSGKTLAFLLPAMQ 61
Query: 67 KWC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
+ DP A++L PTRELA Q+ Q +L + + I GG + DQ K
Sbjct: 62 RMISCKALSKRDPR---AVILLPTRELATQVYSQLRLLVANTQFKATKILGGENFNDQAK 118
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LA+ PH V+ATPGRLADHL + LN ++ L+ DEADR+
Sbjct: 119 ALARDPHFVVATPGRLADHLKQHH-LHLNGLELLIFDEADRM 159
>gi|242076434|ref|XP_002448153.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
gi|241939336|gb|EES12481.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
Length = 807
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 74/182 (40%), Positives = 102/182 (56%), Gaps = 22/182 (12%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLND-EDCIGCAKTGSGKTLAF 60
ED + + +L+L+P L++ + +G K PT IQK+ P + +D IG A+TGSGKTLAF
Sbjct: 209 EDDVSEWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHQGKDVIGAAETGSGKTLAF 268
Query: 61 ALPILQKWCEDPYG-------------------IFALVLTPTRELAYQIGDQFLVLGKVM 101
LPILQ+ E+ + AL+LTPTRELA Q+ D K +
Sbjct: 269 GLPILQRLLEEREKAARLHQEGDKMDERSGGSPLRALILTPTRELAKQVCDHLKDAAKFL 328
Query: 102 NLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNT--FSLNRIKFLVLDEAD 159
+ V I GG+ M Q + L KKP IV+ TPGRL +H+ N L+ + F VLDEAD
Sbjct: 329 GIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFVLDEAD 388
Query: 160 RL 161
R+
Sbjct: 389 RM 390
>gi|117921427|ref|YP_870619.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117613759|gb|ABK49213.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 433
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVENPSETLKSNARVLILTPTRELAAQVADNVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I++ATPGRL +HL CN SL+ I FLVLDEADR+
Sbjct: 123 RGADIIVATPGRLLEHLTACN-LSLSSIDFLVLDEADRM 160
>gi|423462498|ref|ZP_17439292.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG5X2-1]
gi|401131792|gb|EJQ39442.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG5X2-1]
Length = 528
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|336310719|ref|ZP_08565690.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
gi|335865801|gb|EGM70809.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
Length = 432
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVENPSETLKSNARVLILTPTRELAAQVADNVTAYCKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADVIVATPGRLLEHLTACN-LSLSNVDFLVLDEADRM 160
>gi|333916134|ref|YP_004489866.1| DEAD/DEAH box helicase domain-containing protein [Delftia sp.
Cs1-4]
gi|333746334|gb|AEF91511.1| DEAD/DEAH box helicase domain protein [Delftia sp. Cs1-4]
Length = 504
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L+L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + ALVL PTRELA Q+ Q K LR +++ GGMDM Q
Sbjct: 64 RLMRHENTSASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|160897598|ref|YP_001563180.1| DEAD/DEAH box helicase [Delftia acidovorans SPH-1]
gi|160363182|gb|ABX34795.1| DEAD/DEAH box helicase domain protein [Delftia acidovorans SPH-1]
Length = 504
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L+L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + ALVL PTRELA Q+ Q K LR +++ GGMDM Q
Sbjct: 64 RLMRHENTSASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|336311141|ref|ZP_08566108.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
gi|335865357|gb|EGM70383.1| ATP-dependent RNA helicase [Shewanella sp. HN-41]
Length = 449
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ Q +G+ PT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSLQHMGITAPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRALTKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ + F LN ++ L+LDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKHLF-LNGLELLILDEADRM 159
>gi|229009737|ref|ZP_04166960.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus mycoides DSM
2048]
gi|229055077|ref|ZP_04195508.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH603]
gi|423485535|ref|ZP_17462217.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BtB2-4]
gi|423491260|ref|ZP_17467904.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus CER057]
gi|423501944|ref|ZP_17478561.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus CER074]
gi|423596874|ref|ZP_17572899.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD048]
gi|423602239|ref|ZP_17578239.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD078]
gi|423665253|ref|ZP_17640392.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VDM022]
gi|423671681|ref|ZP_17646685.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VDM034]
gi|423672515|ref|ZP_17647454.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VDM062]
gi|228721261|gb|EEL72786.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH603]
gi|228751532|gb|EEM01335.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus mycoides DSM
2048]
gi|401151508|gb|EJQ58957.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus CER074]
gi|401161714|gb|EJQ69077.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus CER057]
gi|401218539|gb|EJR25216.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD048]
gi|401226140|gb|EJR32681.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD078]
gi|401290577|gb|EJR96269.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VDM022]
gi|401291502|gb|EJR97173.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VDM034]
gi|401311621|gb|EJS16907.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VDM062]
gi|402441494|gb|EJV73449.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BtB2-4]
Length = 538
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|227528896|ref|ZP_03958945.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus vaginalis
ATCC 49540]
gi|227351170|gb|EEJ41461.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus vaginalis
ATCC 49540]
Length = 501
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F++L L+ L++ + G + T IQ+ IP VL +D IG A+TG+GKT AF LPI++
Sbjct: 3 FSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLKGQDVIGQAQTGTGKTAAFGLPIIEH 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D I A++++PTRELA Q ++ LGK ++RV ++ GG D+ Q + L + P I
Sbjct: 63 VDTDNPNIQAIIISPTRELAIQTQEELFRLGKDKHVRVQVVYGGADIRRQIRNLKQHPQI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DHL+ +T L+ IK LVLDEAD +
Sbjct: 123 LVGTPGRLRDHLNR-HTVKLDHIKTLVLDEADEM 155
>gi|167622911|ref|YP_001673205.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167352933|gb|ABZ75546.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 432
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T IQ+ IP V +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFAPEILRAISECGYEKMTPIQQQAIPAVRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPY-----GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
++P AL+LTPTRELA QI D K ++++V + GG+ M Q +L
Sbjct: 63 MLDNPSTTGRSNARALILTPTRELAAQIADNINDYAKYLDMKVVTVLGGVKMDSQATKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I+IATPGRL +H+ CN SL+ + FLVLDEADR+
Sbjct: 123 RGADIIIATPGRLLEHIVACN-LSLSNVDFLVLDEADRM 160
>gi|418024095|ref|ZP_12663079.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|353536968|gb|EHC06526.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 433
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVENPSETLKSNARVLILTPTRELAAQVADNVTAYCKYLNFSVLTIYGGVKIETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADVIVATPGRLLEHLTACN-LSLSNVDFLVLDEADRM 160
>gi|76154760|gb|AAX26182.2| SJCHGC05440 protein [Schistosoma japonicum]
Length = 202
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L + + T+G P+EIQ IP L +D +G A+TGSGKT AFA+PIL
Sbjct: 4 KSFRELGVCNEICDVVSTLGWIKPSEIQLKAIPAALRKKDIVGLAETGSGKTAAFAIPIL 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK-K 124
Q P FAL+LTPTRELA QI + LG L+V+ + GG + DQ ++L + K
Sbjct: 64 QDLLSKPRHNFALILTPTRELALQIKRLLMELGDKFGLKVACLVGGQHVEDQVRDLKRFK 123
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ TPGR+ HL+ LN ++LVLDEAD++
Sbjct: 124 FHVIVGTPGRVVYHLENTKELRLNHARYLVLDEADQM 160
>gi|337278667|ref|YP_004618138.1| ATP-dependent RNA helicase [Ramlibacter tataouinensis TTB310]
gi|334729743|gb|AEG92119.1| Candidate ATP-dependent RNA helicase [Ramlibacter tataouinensis
TTB310]
Length = 486
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G +T T IQ IP VL D +G A+TG+GKT AF+LP+LQ
Sbjct: 11 SFSNLSLAEPLARAVAEMGYETMTPIQAQAIPVVLTGRDVMGAAQTGTGKTAAFSLPLLQ 70
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K NLR +++ GGMDM Q
Sbjct: 71 RLLKHENSSTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSAVVFGGMDMKPQT 130
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL + +++ATPGRL DH++ N L +++++VLDEADR+
Sbjct: 131 LELKRGVEVLVATPGRLLDHIEAKNAV-LGQVEYVVLDEADRM 172
>gi|221058733|ref|XP_002260012.1| ATP-dependent RNA helicase [Plasmodium knowlesi strain H]
gi|193810085|emb|CAQ41279.1| ATP-dependent RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 524
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 101/160 (63%), Gaps = 2/160 (1%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P +F DL + WLI+ +T+ + PT+IQ+ +P ++ + IG ++TG+GKT+ +
Sbjct: 72 PPVTFEDLGVEDWLIKISKTVQITHPTKIQQLCLPLIMRGHNVIGTSETGTGKTICYCWG 131
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
ILQ+ ++ +G+FALVL PTREL Q+ +QFL+ G + +++ GG +++Q + +
Sbjct: 132 ILQELNKNAFGVFALVLLPTRELVVQVVEQFLLYGYKIGIKILSCIGGFSIIEQRRGVLA 191
Query: 124 KPHIVIATPGRLADHLDTCN--TFSLNRIKFLVLDEADRL 161
KPH+V+ TPGR D ++ C T R+ F VLDEAD L
Sbjct: 192 KPHVVVGTPGRTCDIMENCEDVTNCFKRLSFFVLDEADLL 231
>gi|373950432|ref|ZP_09610393.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
gi|386323730|ref|YP_006019847.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
gi|333817875|gb|AEG10541.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
gi|373887032|gb|EHQ15924.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
Length = 433
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVENPSETLKSNARVLILTPTRELAAQVADNVTAYCKYLNFSVLTIYGGVKIETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADVIVATPGRLLEHLTACN-LSLSNVDFLVLDEADRM 160
>gi|126175289|ref|YP_001051438.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
gi|153001611|ref|YP_001367292.1| DEAD/DEAH box helicase [Shewanella baltica OS185]
gi|160876347|ref|YP_001555663.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|217972460|ref|YP_002357211.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
gi|378709548|ref|YP_005274442.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|386342041|ref|YP_006038407.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|125998494|gb|ABN62569.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
gi|151366229|gb|ABS09229.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
gi|160861869|gb|ABX50403.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
gi|217497595|gb|ACK45788.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
gi|315268537|gb|ADT95390.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|334864442|gb|AEH14913.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 433
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVENPSETLKSNARVLILTPTRELAAQVADNVTAYCKYLNFSVLTIYGGVKIETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADVIVATPGRLLEHLTACN-LSLSNVDFLVLDEADRM 160
>gi|167624613|ref|YP_001674907.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167354635|gb|ABZ77248.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 458
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 97/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ TPTEIQ+ IP L +D + +KTGSGKTLAF LP +Q+
Sbjct: 13 FTDFALDQRLLQSLKHMGIDTPTEIQEQAIPIALAGKDLMASSKTGSGKTLAFLLPAMQR 72
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP ++L PTRELA Q+ Q +L + + I GG + DQ K
Sbjct: 73 LISCKALSKRDPR---VVILLPTRELATQVYSQLRLLVANTQFKATKILGGENFNDQAKA 129
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LA+ PH V+ATPGRLADHL + LN ++ L+LDEADR+
Sbjct: 130 LARDPHFVVATPGRLADHLKQHH-LHLNGLELLILDEADRM 169
>gi|124513404|ref|XP_001350058.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
gi|23615475|emb|CAD52466.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
gi|117956288|gb|ABK58712.1| SF2-family helicase [Plasmodium falciparum]
Length = 490
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L + WLI+ +++ + PT+IQ+ +P ++ ++ IG ++TGSGKT+ + ILQ
Sbjct: 71 TFEELGVEDWLIKISKSVHILYPTKIQQLCLPLIIQGKNVIGSSETGSGKTICYCWSILQ 130
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ ++ YGIF+L+L PTREL +QI +QF + G + + + GG +++Q K + KPH
Sbjct: 131 ELNKNVYGIFSLILLPTRELVFQIIEQFHLYGSKIGVMILSCIGGFSLIEQRKSVMTKPH 190
Query: 127 IVIATPGRLADHLDTC----NTFSLNRIKFLVLDEADRL 161
I++ TPGR++D L++ N F R++FLVLDEAD L
Sbjct: 191 IIVGTPGRISDILESSIDIQNCFK--RLRFLVLDEADLL 227
>gi|302795308|ref|XP_002979417.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
gi|300152665|gb|EFJ19306.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
Length = 749
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/158 (44%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L ++ L+R C +G + PT IQ A IP L D G A TGSGKT AFALPIL+
Sbjct: 118 SFIELNVSRPLLRACDALGYRQPTPIQAACIPLALAGRDICGSAVTGSGKTAAFALPILE 177
Query: 67 KWCEDPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P I A L++TPTRELA Q+ L + ++R S++ GG+ Q L
Sbjct: 178 RLLFRPRRIPAIRVLIITPTRELAVQLHSMIEKLAQFTDIRCSLVVGGLSSKVQEVALRT 237
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P IV+ATPGR+ DHL + L + LVLDEADRL
Sbjct: 238 HPDIVVATPGRMIDHLRNTQSVGLEELAILVLDEADRL 275
>gi|418051651|ref|ZP_12689735.1| DEAD/DEAH box helicase domain protein [Mycobacterium rhodesiae
JS60]
gi|353184343|gb|EHB49870.1| DEAD/DEAH box helicase domain protein [Mycobacterium rhodesiae
JS60]
Length = 565
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 68/164 (41%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ED ++F DL+++P +++ +G +TP+ IQ A IP +L D +G A+TG+GKT AF
Sbjct: 4 LEDAPQTFADLQIHPAVLQAVADVGYETPSAIQAATIPALLAGSDVVGLAQTGTGKTAAF 63
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
A+PIL K + ALVL PTRELA Q+ + F G + + V I GG V Q
Sbjct: 64 AIPILSKIDAESRNTQALVLAPTRELALQVAEAFSRYGAHLKINVLPIYGGSSYVPQLAG 123
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
L + IV+ TPGR+ DHL+ + L+ + +LVLDEAD + M
Sbjct: 124 LKRGAQIVVGTPGRVIDHLEK-GSLDLSHLDYLVLDEADEMLQM 166
>gi|326315975|ref|YP_004233647.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372811|gb|ADX45080.1| DEAD/DEAH box helicase domain protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 491
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G + T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYTSMTPIQAEAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|423480372|ref|ZP_17457062.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6X1-2]
gi|401148764|gb|EJQ56249.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6X1-2]
Length = 534
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKYPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|163789736|ref|ZP_02184173.1| hypothetical protein CAT7_05876 [Carnobacterium sp. AT7]
gi|159874958|gb|EDP69025.1| hypothetical protein CAT7_05876 [Carnobacterium sp. AT7]
Length = 423
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 99/165 (60%), Gaps = 5/165 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+LN L+ + G T IQ+ IPH+LN++D +GCA+TG+GKT AFALPILQ
Sbjct: 3 FNELELNQHLLHALKEAGYTKATPIQEDAIPHLLNNKDLLGCAQTGTGKTAAFALPILQN 62
Query: 68 WCEDPY----GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
E+ I AL+L PTRELA QIG+ F K + L + +I GG+ Q L +
Sbjct: 63 IMEEKTVGKGAIKALILAPTRELAIQIGESFQTYAKYLPLNIQVIFGGVSQNPQTATLKR 122
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLK 168
I+IATPGRL D L LN+++F VLDEAD + M L+
Sbjct: 123 GTDILIATPGRLLD-LIRQGFVKLNQVEFFVLDEADMMLDMGMLR 166
>gi|114048383|ref|YP_738933.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113889825|gb|ABI43876.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 433
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVENPSETLKSNARVLILTPTRELAAQVADNVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADIIVATPGRLLEHLTACN-LSLSSVDFLVLDEADRM 160
>gi|120609836|ref|YP_969514.1| DEAD/DEAH box helicase [Acidovorax citrulli AAC00-1]
gi|120588300|gb|ABM31740.1| DEAD/DEAH box helicase domain protein [Acidovorax citrulli AAC00-1]
Length = 489
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G + T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLSLAEPLARAVAEMGYTSMTPIQAEAIPVVLTGQDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLLKHENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRM 165
>gi|418528845|ref|ZP_13094787.1| hypothetical protein CTATCC11996_04137 [Comamonas testosteroni ATCC
11996]
gi|371454106|gb|EHN67116.1| hypothetical protein CTATCC11996_04137 [Comamonas testosteroni ATCC
11996]
Length = 473
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLHLAEPLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLMRHENASASPARHPVRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 IELKKGVEVLVATPGRLLDHIEAKNVV-LNQVEYVVLDEADRM 165
>gi|168010159|ref|XP_001757772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691048|gb|EDQ77412.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 753
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 72/157 (45%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ LIR C+T+G + PT IQ A IP L D G A TGSGKT AFALP+L++
Sbjct: 130 FGELNLSRPLIRACETLGYREPTPIQAACIPLALTGRDICGSAVTGSGKTGAFALPMLER 189
Query: 68 WCEDPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
P I A L+LTPTRELA Q+ L + ++ +I+ GG+ Q L +
Sbjct: 190 LLYRPRRIPAIRCLILTPTRELAVQVHSMVQKLAQFTDVTSAIVVGGLSSKVQEVALRAR 249
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P IV+ATPGR+ DHL + L + LVLDEADRL
Sbjct: 250 PDIVVATPGRMLDHLQNSLSVGLEDLSILVLDEADRL 286
>gi|407708172|ref|YP_006831757.1| hypothetical protein MC28_4936 [Bacillus thuringiensis MC28]
gi|407385857|gb|AFU16358.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
MC28]
Length = 507
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTRKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|328865714|gb|EGG14100.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1076
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 69/159 (43%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F + L+ +L + G K PT IQ+ IP +L +D +G A+TGSGKT AF +P++QK
Sbjct: 270 FQGMDLHKFLFKAVMKKGFKQPTPIQRLTIPLILEGQDVVGMARTGSGKTAAFVIPMIQK 329
Query: 68 WCEDPY--GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ + G A++L+PTRELA Q L +LR +I GG +M DQ ELA+ P
Sbjct: 330 LAQHSHKVGARAIILSPTRELALQTYRVVKELSSGSDLRSCVIVGGDNMADQFTELARNP 389
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLM 164
I+IATPGRL HL N L+ ++++V DEADRL M
Sbjct: 390 DIIIATPGRLVHHLTEVN-MGLHTVQYIVFDEADRLFEM 427
>gi|313112968|ref|ZP_07798612.1| DEAD/DEAH box helicase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624733|gb|EFQ08044.1| DEAD/DEAH box helicase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 638
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 72/159 (45%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L+R Q G +TP+ IQ A IP VL+ D +GCA+TG+GKT AFALP+L
Sbjct: 2 TFKELNLSAPLLRAVQEAGYETPSPIQAAAIPPVLSGRDLMGCAQTGTGKTAAFALPMLD 61
Query: 67 KWCEDPY----GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
+ + I AL+LTPTRELA QIG+ F GK + LR ++I GG+ Q + L
Sbjct: 62 RLTANAPRRKGAIRALILTPTRELALQIGESFDAYGKYLKLRSTVIFGGVGQAPQVEALK 121
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
K I+IA PGRL D + L+ ++ VLDEADR+
Sbjct: 122 KGVDILIACPGRLNDLIGQ-GFIDLSNLEIFVLDEADRM 159
>gi|221065648|ref|ZP_03541753.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
gi|220710671|gb|EED66039.1| DEAD/DEAH box helicase domain protein [Comamonas testosteroni KF-1]
Length = 473
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF++L L L R +G ++ T IQ IP VL +D +G A+TG+GKT AF+LP+LQ
Sbjct: 4 SFSNLHLAEPLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPLLQ 63
Query: 67 KWCEDP--------YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
+ + + ALVL PTRELA Q+ Q + K LR +++ GGMDM Q
Sbjct: 64 RLMRHENASASPARHPVRALVLLPTRELADQVAQQIALYAKHTKLRSTVVFGGMDMKPQT 123
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
EL K +++ATPGRL DH++ N LN+++++VLDEADR+
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNVV-LNQVEYVVLDEADRM 165
>gi|442320812|ref|YP_007360833.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
gi|441488454|gb|AGC45149.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus DSM
14675]
Length = 497
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L+L+ L+R + G TPT IQ IPH L +D +G A+TG+GKT AFALPILQ
Sbjct: 2 TFDELQLHDTLLRAVKAEGYTTPTPIQAKAIPHALAGKDVLGVAQTGTGKTAAFALPILQ 61
Query: 67 KW-CEDPYG----IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+ + P G + LVLTPTRELA Q+G+ F+ GK + LR ++I GG+ Q + L
Sbjct: 62 RLSAKAPAGGARPVRCLVLTPTRELAGQVGESFMTYGKNLPLRHAVIFGGVGQGAQVQSL 121
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL D +D SL ++ VLDEADR+
Sbjct: 122 QRGVDVLVATPGRLLDLMDQ-GYVSLRSLEVFVLDEADRM 160
>gi|339007892|ref|ZP_08640466.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|338775095|gb|EGP34624.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
Length = 506
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+P ++R +G + T IQ IP L D IG A+TG+GKT+AF +P+++
Sbjct: 3 TFNELGLSPSVLRSISNMGFEEATPIQALTIPVALTGRDLIGQAQTGTGKTVAFGIPMIE 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K I +VL PTRELA Q+ ++ + LG+ ++ I GG D++ Q + L K PH
Sbjct: 63 KIDTSSNHIQGIVLAPTRELAVQVSEELIKLGQYTGIKTLPIYGGQDIMRQIRALKKNPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DH++ T L I+ LVLDEAD +
Sbjct: 123 VIVATPGRLIDHINR-RTIRLQNIQTLVLDEADEM 156
>gi|421871323|ref|ZP_16302945.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
gi|372459950|emb|CCF12494.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
Length = 506
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+P ++R +G + T IQ IP L D IG A+TG+GKT+AF +P+++
Sbjct: 3 TFNELGLSPSVLRSISNMGFEEATPIQALTIPVALTGRDLIGQAQTGTGKTVAFGIPMIE 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K I +VL PTRELA Q+ ++ + LG+ ++ I GG D++ Q + L K PH
Sbjct: 63 KIDTSSNHIQGIVLAPTRELAVQVSEELIKLGQYTGIKTLPIYGGQDIMRQIRALKKNPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+++ATPGRL DH++ T L I+ LVLDEAD +
Sbjct: 123 VIVATPGRLIDHINR-RTIRLQNIQTLVLDEADEM 156
>gi|313231894|emb|CBY09006.1| unnamed protein product [Oikopleura dioica]
Length = 1234
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 97/166 (58%), Gaps = 6/166 (3%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED SF D L++ +G TPT IQKA IP + D CA TGSGKT AF
Sbjct: 99 EDEKDSFADYGFERKLLKALANVGWTTPTPIQKASIPVAVTGRDICACATTGSGKTGAFV 158
Query: 62 LPILQKWC-EDPYGIFA----LVLTPTRELAYQIGDQFLVL-GKVMNLRVSIITGGMDMV 115
LPILQ++ DP + + LVL PTREL Q+ F L ++ N+ V+ GG+D+V
Sbjct: 159 LPILQRFALRDPSKVESCTRVLVLLPTRELCVQVFAVFRKLVAELENVTVACAAGGLDLV 218
Query: 116 DQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
Q + L + P I++ATPGRL DHL FSL I+ LVLDEADR+
Sbjct: 219 QQTQVLRRDPDILVATPGRLIDHLHNTPNFSLQEIEILVLDEADRM 264
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 97/166 (58%), Gaps = 6/166 (3%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
ED SF D L++ +G TPT IQKA IP + D CA TGSGKT AF
Sbjct: 648 EDEKDSFADYGFERKLLKALANVGWTTPTPIQKASIPVAVTGRDICACATTGSGKTGAFV 707
Query: 62 LPILQKWC-EDPYGIFA----LVLTPTRELAYQIGDQFLVL-GKVMNLRVSIITGGMDMV 115
LPILQ++ DP + + LVL PTREL Q+ F L ++ N+ V+ GG+D+V
Sbjct: 708 LPILQRFALRDPSKVESCTRVLVLLPTRELCVQVFAVFRKLVAELENVTVACAAGGLDLV 767
Query: 116 DQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
Q + L + P I++ATPGRL DHL FSL I+ LVLDEADR+
Sbjct: 768 QQTQVLRRDPDILVATPGRLIDHLHNTPNFSLQEIEILVLDEADRM 813
>gi|229074285|ref|ZP_04207329.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock4-18]
gi|229094946|ref|ZP_04225949.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock3-29]
gi|229113900|ref|ZP_04243333.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock1-3]
gi|423381728|ref|ZP_17359011.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG1O-2]
gi|423444415|ref|ZP_17421320.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG4X2-1]
gi|423450244|ref|ZP_17427122.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG5O-1]
gi|423467853|ref|ZP_17444621.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6O-1]
gi|423537254|ref|ZP_17513672.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB2-9]
gi|423542981|ref|ZP_17519369.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB4-10]
gi|423543712|ref|ZP_17520070.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB5-5]
gi|423620164|ref|ZP_17595995.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD115]
gi|423626833|ref|ZP_17602608.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD148]
gi|228669561|gb|EEL24970.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock1-3]
gi|228688479|gb|EEL42354.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock3-29]
gi|228708837|gb|EEL60966.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock4-18]
gi|401126252|gb|EJQ33996.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG5O-1]
gi|401167096|gb|EJQ74390.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB4-10]
gi|401186994|gb|EJQ94070.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB5-5]
gi|401248889|gb|EJR55208.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD115]
gi|401250188|gb|EJR56490.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD148]
gi|401628655|gb|EJS46489.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG1O-2]
gi|402411097|gb|EJV43473.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG4X2-1]
gi|402412290|gb|EJV44650.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6O-1]
gi|402459706|gb|EJV91442.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HuB2-9]
Length = 529
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTRKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|115459372|ref|NP_001053286.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|158513183|sp|A2XVF7.2|RH13_ORYSI RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|158513708|sp|A3AVH5.2|RH13_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|32488303|emb|CAE03369.1| OSJNBb0065L13.12 [Oryza sativa Japonica Group]
gi|113564857|dbj|BAF15200.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|116311068|emb|CAH67998.1| OSIGBa0157K09-H0214G12.9 [Oryza sativa Indica Group]
Length = 832
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 75/183 (40%), Positives = 103/183 (56%), Gaps = 23/183 (12%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLND-EDCIGCAKTGSGKTLAF 60
ED + ++ +L+L+P LI + +G K PT IQKA P + +D IG A+TGSGKTLAF
Sbjct: 194 EDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAF 253
Query: 61 ALPILQKWCEDPYG--------------------IFALVLTPTRELAYQIGDQFLVLGKV 100
LPILQ+ E+ + AL+LTPTRELA Q+ D K
Sbjct: 254 GLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKF 313
Query: 101 MNLRVSIITGGMDMVDQGKELAKKPHIVIATPGRLADHLDTCNT--FSLNRIKFLVLDEA 158
+ ++V I GG+ M Q + L +KP IV+ TPGRL + + T N L+ + F VLDEA
Sbjct: 314 LRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEA 373
Query: 159 DRL 161
DR+
Sbjct: 374 DRM 376
>gi|423421599|ref|ZP_17398688.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG3X2-1]
gi|401097261|gb|EJQ05289.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG3X2-1]
Length = 532
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTRKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|229015638|ref|ZP_04172628.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH1273]
gi|229021830|ref|ZP_04178406.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH1272]
gi|423393316|ref|ZP_17370542.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG1X1-3]
gi|228739470|gb|EEL89890.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH1272]
gi|228745658|gb|EEL95670.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH1273]
gi|401630235|gb|EJS48042.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG1X1-3]
Length = 530
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTRKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|431208676|ref|ZP_19500889.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
gi|430570682|gb|ELB09622.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
Length = 503
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|52144993|ref|YP_081836.1| DEAD/DEAH box helicase [Bacillus cereus E33L]
gi|81689748|sp|Q63GX5.1|CSHA_BACCZ RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|51978462|gb|AAU20012.1| DEAD/DEAH box helicase [Bacillus cereus E33L]
Length = 528
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|256087842|ref|XP_002580072.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646373|emb|CCD58966.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 454
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L + + T+G P+EIQ IP L +D +G A+TGSGKT AFA+PIL
Sbjct: 4 KSFKELGVCNEICDVISTLGWVKPSEIQLKAIPAALRKKDIVGLAETGSGKTAAFAIPIL 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK-K 124
Q P FAL+LTPTRELA Q+ F+ LG L+V + GG + DQ ++L + K
Sbjct: 64 QDLLSKPRHNFALILTPTRELALQVKCLFMELGDKFGLKVVCLVGGQHVEDQVRDLKRLK 123
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ TPGR+ HL+ LN +++ VLDEAD++
Sbjct: 124 FHVIVGTPGRVVYHLENTKELRLNHVRYFVLDEADQM 160
>gi|42779348|ref|NP_976595.1| DEAD/DEAH box helicase [Bacillus cereus ATCC 10987]
gi|206977074|ref|ZP_03237974.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
H3081.97]
gi|217957807|ref|YP_002336351.1| DEAD/DEAH box family ATP-dependent RNA helicase [Bacillus cereus
AH187]
gi|222094007|ref|YP_002528058.1| dead/deah box helicase [Bacillus cereus Q1]
gi|229137077|ref|ZP_04265701.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-ST26]
gi|229194624|ref|ZP_04321421.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus m1293]
gi|375282337|ref|YP_005102772.1| ATP-dependent RNA helicase [Bacillus cereus NC7401]
gi|384178162|ref|YP_005563924.1| DEAD/DEAH box helicase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402554174|ref|YP_006595445.1| DEAD/DEAH box helicase [Bacillus cereus FRI-35]
gi|423357187|ref|ZP_17334786.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus IS075]
gi|423376168|ref|ZP_17353482.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus AND1407]
gi|423572348|ref|ZP_17548555.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MSX-A12]
gi|423577914|ref|ZP_17554033.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MSX-D12]
gi|423607941|ref|ZP_17583834.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD102]
gi|81700027|sp|Q73EU1.1|CSHA_BACC1 RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|42735263|gb|AAS39203.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
ATCC 10987]
gi|206744723|gb|EDZ56130.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
H3081.97]
gi|217064501|gb|ACJ78751.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH187]
gi|221238056|gb|ACM10766.1| DEAD/DEAH box helicase [Bacillus cereus Q1]
gi|228588845|gb|EEK46866.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus m1293]
gi|228646384|gb|EEL02594.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-ST26]
gi|324324246|gb|ADY19506.1| DEAD/DEAH box helicase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|358350860|dbj|BAL16032.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
NC7401]
gi|401075815|gb|EJP84184.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus IS075]
gi|401089159|gb|EJP97331.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus AND1407]
gi|401197715|gb|EJR04643.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MSX-A12]
gi|401203960|gb|EJR10791.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MSX-D12]
gi|401239515|gb|EJR45942.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD102]
gi|401795384|gb|AFQ09243.1| DEAD/DEAH box helicase [Bacillus cereus FRI-35]
Length = 525
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|260558407|ref|ZP_05830603.1| helicase [Enterococcus faecium C68]
gi|261207113|ref|ZP_05921802.1| helicase [Enterococcus faecium TC 6]
gi|289567232|ref|ZP_06447617.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|293556891|ref|ZP_06675452.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|293567807|ref|ZP_06679148.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|294615128|ref|ZP_06695014.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|294617803|ref|ZP_06697416.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|406579294|ref|ZP_11054526.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|406581588|ref|ZP_11056725.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|406584027|ref|ZP_11059065.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|406589825|ref|ZP_11064245.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410938072|ref|ZP_11369930.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|424789110|ref|ZP_18215819.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|424953765|ref|ZP_18368708.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|424962400|ref|ZP_18376756.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|424963599|ref|ZP_18377803.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|424970725|ref|ZP_18384213.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|424978089|ref|ZP_18391038.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|425038208|ref|ZP_18442830.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|425058609|ref|ZP_18461987.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|425060636|ref|ZP_18463922.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|427397059|ref|ZP_18889685.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430820898|ref|ZP_19439518.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430823396|ref|ZP_19441967.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430826317|ref|ZP_19444503.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430828899|ref|ZP_19447010.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430834757|ref|ZP_19452759.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430836494|ref|ZP_19454473.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430839412|ref|ZP_19457353.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430843175|ref|ZP_19461076.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430850821|ref|ZP_19468578.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430853175|ref|ZP_19470905.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430858894|ref|ZP_19476513.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430861435|ref|ZP_19478942.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430866428|ref|ZP_19481705.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430892938|ref|ZP_19484559.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430952632|ref|ZP_19486438.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|431000766|ref|ZP_19488247.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|431234137|ref|ZP_19502906.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|431256501|ref|ZP_19504856.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|431303424|ref|ZP_19508271.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|431380394|ref|ZP_19510775.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|431441111|ref|ZP_19513326.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|431506774|ref|ZP_19515600.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|431725207|ref|ZP_19525416.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|431744090|ref|ZP_19532962.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|431747114|ref|ZP_19535916.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|431760196|ref|ZP_19548798.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|431765027|ref|ZP_19553551.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
gi|260075581|gb|EEW63887.1| helicase [Enterococcus faecium C68]
gi|260078741|gb|EEW66443.1| helicase [Enterococcus faecium TC 6]
gi|289160980|gb|EFD08895.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|291589392|gb|EFF21199.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|291592070|gb|EFF23693.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|291595943|gb|EFF27223.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|291600975|gb|EFF31266.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|402922578|gb|EJX42943.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|402938304|gb|EJX57320.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|402940682|gb|EJX59477.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|402948694|gb|EJX66809.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|402960765|gb|EJX77866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|402963120|gb|EJX80012.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|403019904|gb|EJY32478.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|403038013|gb|EJY49253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|403042418|gb|EJY53373.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|404455599|gb|EKA02443.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|404459354|gb|EKA05720.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|404464924|gb|EKA10437.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|404470265|gb|EKA14916.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410733711|gb|EKQ75634.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|425722385|gb|EKU85280.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430439035|gb|ELA49418.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430442109|gb|ELA52157.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430445197|gb|ELA54971.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430482561|gb|ELA59676.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430484826|gb|ELA61773.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430488294|gb|ELA64976.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430490870|gb|ELA67366.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430497924|gb|ELA73941.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430535180|gb|ELA75603.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430540997|gb|ELA81174.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430544740|gb|ELA84762.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430549900|gb|ELA89710.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430551656|gb|ELA91407.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430555404|gb|ELA94942.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430557231|gb|ELA96699.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|430562425|gb|ELB01657.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|430573163|gb|ELB11993.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|430577603|gb|ELB16190.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|430580065|gb|ELB18545.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|430582262|gb|ELB20689.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|430586467|gb|ELB24719.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|430587161|gb|ELB25394.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|430595854|gb|ELB33732.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|430605718|gb|ELB43100.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|430607222|gb|ELB44549.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|430624005|gb|ELB60656.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|430629510|gb|ELB65910.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
Length = 503
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|170727393|ref|YP_001761419.1| DEAD/DEAH box helicase [Shewanella woodyi ATCC 51908]
gi|169812740|gb|ACA87324.1| DEAD/DEAH box helicase domain protein [Shewanella woodyi ATCC
51908]
Length = 447
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FT+ L+ L++ +G+ TPTEIQ+ IP L+ +D + +KTGSGKTLAF LP +Q+
Sbjct: 3 FTEFSLDARLLQSLSHMGITTPTEIQEMAIPVGLSGKDLMASSKTGSGKTLAFLLPAMQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA Q+ Q +L + I GG + DQ K
Sbjct: 63 IISTKALSKRDPR---VLILLPTRELANQVYSQLRLLVANTQYKALKILGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LA+ PH V+ATPGRLADHL + F LN ++ L+LDEADR+
Sbjct: 120 LARDPHFVVATPGRLADHL-AQHHFHLNGLELLILDEADRM 159
>gi|328956797|ref|YP_004374183.1| ATP-dependent RNA helicase RhlE [Carnobacterium sp. 17-4]
gi|328673121|gb|AEB29167.1| ATP-dependent RNA helicase RhlE [Carnobacterium sp. 17-4]
Length = 423
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 5/165 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+LN L+ + G T IQ+ IPH++N++D +GCA+TG+GKT AFALPILQ
Sbjct: 3 FNELELNQHLLHALKEAGYTKATPIQEDAIPHLMNNKDLLGCAQTGTGKTAAFALPILQN 62
Query: 68 WCEDPY----GIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
E+ I AL+L PTRELA QIGD F K + L + +I GG+ Q L +
Sbjct: 63 IMEEKTIGKGAIKALILAPTRELAIQIGDSFQTYAKYLPLNIQVIFGGVSQNPQTATLKR 122
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLK 168
I++ATPGRL D L LN++ F VLDEAD + M L+
Sbjct: 123 GTDILVATPGRLLD-LIRQGFVKLNQVDFFVLDEADMMLDMGMLR 166
>gi|392427583|ref|YP_006468577.1| DNA/RNA helicase, superfamily II [Desulfosporosinus acidiphilus
SJ4]
gi|391357546|gb|AFM43245.1| DNA/RNA helicase, superfamily II [Desulfosporosinus acidiphilus
SJ4]
Length = 488
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SFTDL L+ +IR +G + T IQ+ IP L D IG A+TG+GKT A+ +P+++
Sbjct: 3 SFTDLGLSETIIRSIVNMGFEETTPIQEMTIPIALQGRDLIGQAQTGTGKTAAYGIPLIE 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
++ E I +VL PTRELA Q+ ++ +G+ + I GG ++ Q + L K+PH
Sbjct: 63 RFAEQSEQIQGIVLAPTRELAVQVAEELNKIGQFKGIHSLPIYGGQNIDWQIRALRKRPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL DH+ T LN IK +VLDEAD +
Sbjct: 123 IIVATPGRLMDHM-RRRTIRLNEIKIVVLDEADEM 156
>gi|257885750|ref|ZP_05665403.1| helicase [Enterococcus faecium 1,231,501]
gi|257821606|gb|EEV48736.1| helicase [Enterococcus faecium 1,231,501]
Length = 503
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|425055862|ref|ZP_18459326.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
gi|403033019|gb|EJY44552.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
Length = 503
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|254756954|ref|ZP_05208982.1| DEAD/DEAH box helicase [Bacillus anthracis str. Australia 94]
Length = 516
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|228956670|ref|ZP_04118461.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|423632143|ref|ZP_17607889.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD154]
gi|228803008|gb|EEM49835.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|401262038|gb|EJR68185.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD154]
Length = 517
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|229041132|ref|ZP_04189892.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH676]
gi|423646358|ref|ZP_17621928.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD169]
gi|228727214|gb|EEL78411.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus AH676]
gi|401287656|gb|EJR93433.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD169]
Length = 525
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|229107908|ref|ZP_04237540.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock1-15]
gi|229125742|ref|ZP_04254771.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-Cer4]
gi|229143032|ref|ZP_04271470.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-ST24]
gi|296501059|ref|YP_003662759.1| ATP-dependent RNA helicase [Bacillus thuringiensis BMB171]
gi|423590490|ref|ZP_17566552.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD045]
gi|423644958|ref|ZP_17620574.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD166]
gi|423653166|ref|ZP_17628465.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD200]
gi|146291075|sp|Q81IT9.2|CSHA_BACCR RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|228640440|gb|EEK96832.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-ST24]
gi|228657715|gb|EEL13524.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus
BDRD-Cer4]
gi|228675551|gb|EEL30763.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock1-15]
gi|296322111|gb|ADH05039.1| ATP-dependent RNA helicase [Bacillus thuringiensis BMB171]
gi|401220472|gb|EJR27106.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD045]
gi|401268292|gb|EJR74342.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD166]
gi|401302693|gb|EJS08265.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD200]
Length = 533
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|30260423|ref|NP_842800.1| DEAD/DEAH box helicase [Bacillus anthracis str. Ames]
gi|47525504|ref|YP_016853.1| DEAD/DEAH box helicase [Bacillus anthracis str. 'Ames Ancestor']
gi|47567484|ref|ZP_00238196.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
G9241]
gi|49183266|ref|YP_026518.1| DEAD/DEAH box helicase [Bacillus anthracis str. Sterne]
gi|49479130|ref|YP_034574.1| DEAD/DEAH box helicase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|65317675|ref|ZP_00390634.1| COG0513: Superfamily II DNA and RNA helicases [Bacillus anthracis
str. A2012]
gi|118475995|ref|YP_893146.1| DEAD/DEAH box helicase [Bacillus thuringiensis str. Al Hakam]
gi|165871548|ref|ZP_02216194.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0488]
gi|167634144|ref|ZP_02392466.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0442]
gi|167640350|ref|ZP_02398615.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0193]
gi|170687759|ref|ZP_02878974.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0465]
gi|170707898|ref|ZP_02898348.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0389]
gi|177653423|ref|ZP_02935633.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0174]
gi|190567376|ref|ZP_03020290.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Tsiankovskii-I]
gi|196035956|ref|ZP_03103357.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
W]
gi|196041156|ref|ZP_03108452.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
NVH0597-99]
gi|196046212|ref|ZP_03113439.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB108]
gi|218901440|ref|YP_002449274.1| ATP-dependent RNA helicase [Bacillus cereus AH820]
gi|225862289|ref|YP_002747667.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB102]
gi|227812915|ref|YP_002812924.1| ATP-dependent RNA helicase [Bacillus anthracis str. CDC 684]
gi|228912978|ref|ZP_04076622.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228925493|ref|ZP_04088587.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228931740|ref|ZP_04094641.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228983493|ref|ZP_04143703.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229089370|ref|ZP_04220646.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock3-42]
gi|229119903|ref|ZP_04249162.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus 95/8201]
gi|229154007|ref|ZP_04282136.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus ATCC
4342]
gi|229182634|ref|ZP_04309880.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus BGSC 6E1]
gi|229604746|ref|YP_002864874.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0248]
gi|254686589|ref|ZP_05150448.1| DEAD/DEAH box helicase [Bacillus anthracis str. CNEVA-9066]
gi|254723571|ref|ZP_05185358.1| DEAD/DEAH box helicase [Bacillus anthracis str. A1055]
gi|254734933|ref|ZP_05192645.1| DEAD/DEAH box helicase [Bacillus anthracis str. Western North
America USA6153]
gi|254739718|ref|ZP_05197411.1| DEAD/DEAH box helicase [Bacillus anthracis str. Kruger B]
gi|254754911|ref|ZP_05206946.1| DEAD/DEAH box helicase [Bacillus anthracis str. Vollum]
gi|301051970|ref|YP_003790181.1| DEAD/DEAH box helicase [Bacillus cereus biovar anthracis str. CI]
gi|376264267|ref|YP_005116979.1| cold-shock DEAD-box protein A [Bacillus cereus F837/76]
gi|386734107|ref|YP_006207288.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus anthracis str.
H9401]
gi|81696998|sp|Q6HPE6.1|CSHA_BACHK RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|81715465|sp|Q81VG0.1|CSHA_BACAN RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|134039177|sp|A0R8U6.1|CSHA_BACAH RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|30253744|gb|AAP24286.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Ames]
gi|47500652|gb|AAT29328.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. 'Ames Ancestor']
gi|47555886|gb|EAL14225.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
G9241]
gi|49177193|gb|AAT52569.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Sterne]
gi|49330686|gb|AAT61332.1| DEAD/DEAH box helicase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|118415220|gb|ABK83639.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
thuringiensis str. Al Hakam]
gi|164712652|gb|EDR18183.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0488]
gi|167511752|gb|EDR87133.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0193]
gi|167530458|gb|EDR93173.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0442]
gi|170127256|gb|EDS96133.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0389]
gi|170668286|gb|EDT19034.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0465]
gi|172081463|gb|EDT66536.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0174]
gi|190561503|gb|EDV15474.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Tsiankovskii-I]
gi|195991325|gb|EDX55292.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
W]
gi|196022957|gb|EDX61637.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB108]
gi|196028091|gb|EDX66702.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
NVH0597-99]
gi|218539043|gb|ACK91441.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH820]
gi|225790192|gb|ACO30409.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB102]
gi|227005398|gb|ACP15141.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. CDC 684]
gi|228600842|gb|EEK58416.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus BGSC 6E1]
gi|228629528|gb|EEK86226.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus ATCC
4342]
gi|228663560|gb|EEL19141.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus 95/8201]
gi|228693970|gb|EEL47657.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock3-42]
gi|228776237|gb|EEM24593.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228827920|gb|EEM73653.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228834238|gb|EEM79781.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228846673|gb|EEM91681.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229269154|gb|ACQ50791.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0248]
gi|300374139|gb|ADK03043.1| DEAD/DEAH box helicase [Bacillus cereus biovar anthracis str. CI]
gi|364510067|gb|AEW53466.1| Cold-shock DEAD-box protein A [Bacillus cereus F837/76]
gi|384383959|gb|AFH81620.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus anthracis str.
H9401]
Length = 528
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|254975780|ref|ZP_05272252.1| ATP-dependent RNA helicase [Clostridium difficile QCD-66c26]
gi|255650694|ref|ZP_05397596.1| ATP-dependent RNA helicase [Clostridium difficile QCD-37x79]
gi|260687441|ref|YP_003218575.1| ATP-dependent RNA helicase [Clostridium difficile R20291]
gi|260213458|emb|CBE05139.1| ATP-dependent RNA helicase [Clostridium difficile R20291]
Length = 497
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 101/155 (65%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F KLN +++ +++G P+ +Q+ +IP +L ++ + +KTGSGKT++FA+P+ +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTVSFAIPLCE 63
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
D I AL++ PTRELA Q+ D+ +G++ +R S I G + DQ EL ++ H
Sbjct: 64 NINVDCNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGR+ DH++ + L +K+LV+DEAD++
Sbjct: 124 IVVATPGRILDHINK-GSIKLENVKYLVIDEADKM 157
>gi|257899462|ref|ZP_05679115.1| helicase [Enterococcus faecium Com15]
gi|293573030|ref|ZP_06683972.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430842364|ref|ZP_19460279.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|431081588|ref|ZP_19495678.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|431118220|ref|ZP_19498174.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|431592214|ref|ZP_19521450.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|431738949|ref|ZP_19527889.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|431740772|ref|ZP_19529683.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
gi|257837374|gb|EEV62448.1| helicase [Enterococcus faecium Com15]
gi|291606932|gb|EFF36312.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430493445|gb|ELA69748.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|430565520|gb|ELB04666.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|430568177|gb|ELB07234.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|430591839|gb|ELB29866.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|430596492|gb|ELB34316.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|430602855|gb|ELB40405.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
Length = 503
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|152974078|ref|YP_001373595.1| DEAD/DEAH box helicase [Bacillus cytotoxicus NVH 391-98]
gi|152022830|gb|ABS20600.1| DEAD/DEAH box helicase domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 511
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ + +G + T IQ IPH L +D IG A+TG+GKT AF LP+L+
Sbjct: 15 TFRELGLSDSLLQSVEKMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLE 74
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ +G+ +R+ I GG D+ Q + L K+PH
Sbjct: 75 KVDTNKEMVQGIVIAPTRELAIQVGEELYKIGQHKRVRILPIYGGQDINRQIRALKKRPH 134
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 135 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 168
>gi|228950768|ref|ZP_04112897.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229067991|ref|ZP_04201304.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus F65185]
gi|229077588|ref|ZP_04210230.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock4-2]
gi|229176827|ref|ZP_04304229.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus 172560W]
gi|423422457|ref|ZP_17399488.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG3X2-2]
gi|423433901|ref|ZP_17410882.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus
BAG4X12-1]
gi|423507747|ref|ZP_17484314.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HD73]
gi|449086891|ref|YP_007419332.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|228606719|gb|EEK64138.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus 172560W]
gi|228705727|gb|EEL58071.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock4-2]
gi|228715129|gb|EEL66992.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus F65185]
gi|228808908|gb|EEM55398.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401119847|gb|EJQ27653.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG3X2-2]
gi|401128051|gb|EJQ35755.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus
BAG4X12-1]
gi|402443146|gb|EJV75059.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus HD73]
gi|449020648|gb|AGE75811.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 525
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|206972279|ref|ZP_03233226.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH1134]
gi|218235804|ref|YP_002365074.1| DEAD/DEAH box helicase [Bacillus cereus B4264]
gi|228919172|ref|ZP_04082546.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|229148635|ref|ZP_04276889.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus m1550]
gi|365163836|ref|ZP_09359936.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus sp.
7_6_55CFAA_CT2]
gi|423415878|ref|ZP_17392998.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG3O-2]
gi|423428328|ref|ZP_17405332.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG4O-1]
gi|423578634|ref|ZP_17554745.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD014]
gi|423638228|ref|ZP_17613880.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD156]
gi|206732853|gb|EDZ50028.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH1134]
gi|218163761|gb|ACK63753.1| DEAD/DEAH box helicase [Bacillus cereus B4264]
gi|228634893|gb|EEK91468.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus m1550]
gi|228840483|gb|EEM85750.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|363614642|gb|EHL66125.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus sp.
7_6_55CFAA_CT2]
gi|401094716|gb|EJQ02789.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG3O-2]
gi|401126650|gb|EJQ34386.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG4O-1]
gi|401220492|gb|EJR27125.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD014]
gi|401271731|gb|EJR77736.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus VD156]
Length = 533
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|284048361|ref|YP_003398700.1| DEAD/DEAH box helicase [Acidaminococcus fermentans DSM 20731]
gi|283952582|gb|ADB47385.1| DEAD/DEAH box helicase domain protein [Acidaminococcus fermentans
DSM 20731]
Length = 544
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
I SF DL L+ ++ + +G + P+ IQK IP L ED IG A+TG+GKT AF +PI
Sbjct: 18 ITSFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLIGQAQTGTGKTAAFGIPI 77
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
+QK E I ALV++PTREL Q+ D+ +GK +RV + GG + Q + L +
Sbjct: 78 IQKINEKDRHIQALVMSPTRELCIQVADEISKIGKTKRIRVLPVYGGQPIERQIRSLKRG 137
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+VI TPGRL DH+ T L + FLVLDEAD +
Sbjct: 138 IQVVIGTPGRLLDHIRR-GTIDLEYVNFLVLDEADEM 173
>gi|229083524|ref|ZP_04215862.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock3-44]
gi|228699778|gb|EEL52425.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus cereus Rock3-44]
Length = 527
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|224083077|ref|XP_002306942.1| predicted protein [Populus trichocarpa]
gi|222856391|gb|EEE93938.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L L+ L+R C+ +G PT IQ A IP L D G A TGSGKT AFALP L+
Sbjct: 137 SFMELNLSRPLLRACEALGYTKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLE 196
Query: 67 KWCEDPYGIFA---LVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P I A L+LTPTRELA Q+ + + ++R ++ GG+ Q L
Sbjct: 197 RLLFRPKRILAIRVLILTPTRELAVQVHSMIEKIAQFTDIRCCLVVGGLSTKVQEASLRS 256
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P IV+ATPGR+ DHL + L+ + L+LDEADRL
Sbjct: 257 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRL 294
>gi|228989414|ref|ZP_04149403.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus pseudomycoides
DSM 12442]
gi|228770361|gb|EEM18936.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus pseudomycoides
DSM 12442]
Length = 528
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|228995609|ref|ZP_04155275.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus mycoides
Rock3-17]
gi|228764181|gb|EEM13062.1| DEAD-box ATP-dependent RNA helicase ydbR [Bacillus mycoides
Rock3-17]
Length = 536
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|424869804|ref|ZP_18293485.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
gi|402935190|gb|EJX54460.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
Length = 501
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|160888927|ref|ZP_02069930.1| hypothetical protein BACUNI_01347 [Bacteroides uniformis ATCC 8492]
gi|270293944|ref|ZP_06200146.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|423306019|ref|ZP_17284018.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|423309437|ref|ZP_17287427.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
gi|156861394|gb|EDO54825.1| DEAD/DEAH box helicase [Bacteroides uniformis ATCC 8492]
gi|270275411|gb|EFA21271.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. D20]
gi|392679863|gb|EIY73240.1| hypothetical protein HMPREF1072_02958 [Bacteroides uniformis
CL03T00C23]
gi|392684477|gb|EIY77802.1| hypothetical protein HMPREF1073_02177 [Bacteroides uniformis
CL03T12C37]
Length = 425
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 99/157 (63%), Gaps = 3/157 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L +++ Q G TPT IQ+ IP +L +D +GCA+TG+GKT AF++PILQ
Sbjct: 2 TFENLNLIEPILKALQEEGYSTPTPIQEKSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 67 KW--CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
K ++ I AL+LTPTRELA QIG+ F GK LR ++I GG+ Q EL +
Sbjct: 62 KLYKTDNRKSIKALILTPTRELAIQIGESFSAYGKYTGLRHAVIFGGVGQKPQTDELKRG 121
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL D L +L ++F VLDEADR+
Sbjct: 122 VQILVATPGRLQD-LVNQGFINLKALEFFVLDEADRM 157
>gi|120599766|ref|YP_964340.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|120559859|gb|ABM25786.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
Length = 433
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVEKPSETLKSNTRVLILTPTRELAAQVADNVTAYCKYLNFSVLTIYGGVKIETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADVIVATPGRLLEHLTACN-VSLSNVDFLVLDEADRM 160
>gi|423556774|ref|ZP_17533077.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MC67]
gi|401194089|gb|EJR01081.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus MC67]
Length = 535
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IP+ L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPYALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ LGK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVNTNKEAVQGIVIAPTRELAIQVGEELYKLGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|187734531|ref|YP_001876643.1| DEAD/DEAH box helicase [Akkermansia muciniphila ATCC BAA-835]
gi|187424583|gb|ACD03862.1| DEAD/DEAH box helicase domain protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 423
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ ++RQ + + KTPT IQ A IP +L ++D +G A+TG+GKT AFALP++Q
Sbjct: 5 TFRELGLSAPILRQLENLEYKTPTPIQAACIPLLLQNKDLMGLAQTGTGKTAAFALPLIQ 64
Query: 67 KWCE---DPYG--IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+ E P G + AL+L+PTRELA QI + + ++L ++I GG+ Q KEL
Sbjct: 65 QLSERSGKPPGRRVRALILSPTRELAAQIHENIRAYARGLHLSTAVIFGGVGYASQFKEL 124
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
A I++ATPGRL DHL+ T SL+ ++ L+LDEAD +
Sbjct: 125 AGGLDILVATPGRLIDHLER-RTVSLDGVETLILDEADHM 163
>gi|146292298|ref|YP_001182722.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|386312973|ref|YP_006009138.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|145563988|gb|ABP74923.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
gi|319425598|gb|ADV53672.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 433
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFSPEILRAISDCGYQQMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E P L+LTPTRELA Q+ D K +N V I GG+ + Q ++L
Sbjct: 63 MVEKPSETLKSNARVLILTPTRELAAQVADNVTAYCKYLNFSVLTIYGGVKIETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ +++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADVIVATPGRLLEHLTACN-VSLSNVDFLVLDEADRM 160
>gi|407782464|ref|ZP_11129676.1| DEAD/DEAH box helicase [Oceanibaculum indicum P24]
gi|407205829|gb|EKE75795.1| DEAD/DEAH box helicase [Oceanibaculum indicum P24]
Length = 515
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 98/161 (60%), Gaps = 8/161 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTDL L+ +++ G +TPT IQ IP VL D +G A+TG+GKT AFALPIL +
Sbjct: 4 FTDLGLSAPILKAVTAEGYETPTPIQAQAIPPVLTGRDLMGIAQTGTGKTAAFALPILNR 63
Query: 68 WCED------PYGI-FALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
E+ P G L+L+PTRELA QI + F V GK +NL V+ + GG+ Q K
Sbjct: 64 LTEEGNHIKTPRGSCRVLILSPTRELASQIAESFRVYGKFLNLSVATVFGGVSAGPQAKA 123
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L + IV+ATPGRL DHL L++++ VLDEAD++
Sbjct: 124 LQRGVDIVVATPGRLIDHLQN-RVVRLDQVEIFVLDEADQM 163
>gi|217973860|ref|YP_002358611.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
gi|217498995|gb|ACK47188.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
Length = 451
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ PT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRSLSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ + F LN ++ LVLDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKHLF-LNGLELLVLDEADRM 159
>gi|69248308|ref|ZP_00604710.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257878842|ref|ZP_05658495.1| helicase [Enterococcus faecium 1,230,933]
gi|257881478|ref|ZP_05661131.1| helicase [Enterococcus faecium 1,231,502]
gi|257890700|ref|ZP_05670353.1| helicase [Enterococcus faecium 1,231,410]
gi|293560261|ref|ZP_06676758.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|294621795|ref|ZP_06700954.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|314938932|ref|ZP_07846197.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|314943517|ref|ZP_07850284.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|314948188|ref|ZP_07851582.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|314951548|ref|ZP_07854594.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|314991589|ref|ZP_07857065.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|314994922|ref|ZP_07860049.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|383327538|ref|YP_005353422.1| DEAD/DEAH box helicase [Enterococcus faecium Aus0004]
gi|389867363|ref|YP_006374786.1| DEAD/DEAH box helicase [Enterococcus faecium DO]
gi|415892439|ref|ZP_11549927.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|416131873|ref|ZP_11597781.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|424795449|ref|ZP_18221304.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|424819380|ref|ZP_18244487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|424856321|ref|ZP_18280560.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|424949231|ref|ZP_18364921.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|424956289|ref|ZP_18371077.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|424967919|ref|ZP_18381589.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|424976047|ref|ZP_18389165.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|424981969|ref|ZP_18394659.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|424984734|ref|ZP_18397253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|424987723|ref|ZP_18400084.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|424990961|ref|ZP_18403147.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|424995504|ref|ZP_18407380.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|424997413|ref|ZP_18409175.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|425000503|ref|ZP_18412062.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|425003235|ref|ZP_18414612.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|425006604|ref|ZP_18417774.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|425011167|ref|ZP_18422079.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|425013771|ref|ZP_18424487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|425017560|ref|ZP_18428061.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|425022464|ref|ZP_18432645.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|425030171|ref|ZP_18435374.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|425033448|ref|ZP_18438416.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|425034930|ref|ZP_18439786.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|425040930|ref|ZP_18445364.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|425044373|ref|ZP_18448536.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|425047569|ref|ZP_18451517.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|425053412|ref|ZP_18456957.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|430831942|ref|ZP_19449990.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430847435|ref|ZP_19465272.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430855628|ref|ZP_19473336.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|431544298|ref|ZP_19518594.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|431749300|ref|ZP_19538042.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|431755816|ref|ZP_19544461.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|431767952|ref|ZP_19556395.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|431769544|ref|ZP_19557952.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|431773402|ref|ZP_19561727.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|431776500|ref|ZP_19564761.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|431779582|ref|ZP_19567775.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|431782613|ref|ZP_19570746.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|431784440|ref|ZP_19572479.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
gi|68194452|gb|EAN08953.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257813070|gb|EEV41828.1| helicase [Enterococcus faecium 1,230,933]
gi|257817136|gb|EEV44464.1| helicase [Enterococcus faecium 1,231,502]
gi|257827060|gb|EEV53686.1| helicase [Enterococcus faecium 1,231,410]
gi|291598627|gb|EFF29685.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|291605711|gb|EFF35148.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|313590904|gb|EFR69749.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|313593873|gb|EFR72718.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|313596242|gb|EFR75087.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|313597889|gb|EFR76734.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|313641641|gb|EFS06221.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|313645321|gb|EFS09901.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|364093335|gb|EHM35615.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|364093511|gb|EHM35776.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|378937232|gb|AFC62304.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecium Aus0004]
gi|388532612|gb|AFK57804.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium DO]
gi|402924387|gb|EJX44599.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|402926241|gb|EJX46293.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|402930201|gb|EJX49880.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|402934931|gb|EJX54225.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|402946393|gb|EJX64674.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|402952005|gb|EJX69866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|402953338|gb|EJX71063.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|402962168|gb|EJX79137.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|402967955|gb|EJX84466.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|402973745|gb|EJX89845.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|402977156|gb|EJX92995.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|402978215|gb|EJX93973.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|402986313|gb|EJY01444.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|402988977|gb|EJY03941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|402992431|gb|EJY07139.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|402996952|gb|EJY11308.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|402997720|gb|EJY12029.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|403000335|gb|EJY14462.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|403002697|gb|EJY16644.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|403004081|gb|EJY17911.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|403004113|gb|EJY17941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|403009946|gb|EJY23359.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|403018997|gb|EJY31633.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|403027273|gb|EJY39167.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|403029941|gb|EJY41662.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|403030418|gb|EJY42102.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|403033364|gb|EJY44870.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|430480583|gb|ELA57757.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430537055|gb|ELA77408.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430546683|gb|ELA86626.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|430592410|gb|ELB30425.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|430611728|gb|ELB48804.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|430616431|gb|ELB53345.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|430630040|gb|ELB66417.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|430636649|gb|ELB72713.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|430636858|gb|ELB72912.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|430640819|gb|ELB76647.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|430641683|gb|ELB77478.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|430647250|gb|ELB82698.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|430649535|gb|ELB84911.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
Length = 503
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALAGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|237841945|ref|XP_002370270.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967934|gb|EEB03130.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221482742|gb|EEE21080.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221503065|gb|EEE28771.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 698
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/159 (43%), Positives = 96/159 (60%), Gaps = 4/159 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L + P LIR ++ + P+ IQ +PH L ++ G A TGSGKTL + P+LQ
Sbjct: 257 TFASLGVPPALIRTAASLHIFHPSPIQVLSLPHTLRGKNVCGLAPTGSGKTLGYCWPLLQ 316
Query: 67 KWCE-DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ D + LVL P RELA Q+ DQF + G + +RV ++ GG D+V++GK L + P
Sbjct: 317 RIGRGDGHAFMGLVLLPARELAIQVLDQFRIYGVQLGVRVCLLLGGRDLVEEGKLLDQCP 376
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKF---LVLDEADRL 161
HIVIATPGR++DH+ R+ LVLDEADRL
Sbjct: 377 HIVIATPGRMSDHVQNDPLRMKKRLSLVDVLVLDEADRL 415
>gi|157962445|ref|YP_001502479.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157847445|gb|ABV87944.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 448
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 11/162 (6%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
FTD L+ L++ + +G+ TPTEIQ+ IP L +D + +KTGSGKTLAF LP +Q
Sbjct: 2 QFTDFALDQRLLQSLKHMGIDTPTEIQEQAIPVALAGKDLMASSKTGSGKTLAFLLPAMQ 61
Query: 67 KWC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGK 119
+ DP ++L PTRELA Q+ Q +L + + I GG + DQ K
Sbjct: 62 RLISCKALSKRDPR---VVILLPTRELATQVYSQLRLLVANTQFKATKILGGENFNDQAK 118
Query: 120 ELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L++ PH V+ATPGRLADHL + LN ++ L+LDEADR+
Sbjct: 119 ALSRDPHFVVATPGRLADHLKQHH-LHLNGLELLILDEADRM 159
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/160 (43%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SFT + L+ L++ +G TPT IQ A IP L +D +G A TGSGKT AF +P+L+
Sbjct: 186 SFTTMSLSRPLLKALTALGFSTPTPIQVATIPVALLGKDVVGNAVTGSGKTAAFMIPVLE 245
Query: 67 KWC-----EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
+ ++ + +VL PTREL Q D L M++R+S+I GG+ + Q EL
Sbjct: 246 RLMYRERGKNKAAVRCVVLVPTRELGVQCVDVAKKLSAFMDVRISLIVGGLSLKSQEAEL 305
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+P IVIATPGRL DHL +F L + L+LDEADR+
Sbjct: 306 RTRPDIVIATPGRLIDHLRNSPSFGLETLDVLILDEADRM 345
>gi|373949045|ref|ZP_09609006.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
gi|386325116|ref|YP_006021233.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
gi|333819261|gb|AEG11927.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
gi|373885645|gb|EHQ14537.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
Length = 451
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ PT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRSLSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ + F LN ++ LVLDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKHLF-LNGLELLVLDEADRM 159
>gi|255589747|ref|XP_002535074.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223524093|gb|EEF27309.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 465
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L P L+ IG PT IQ+A IP +L ED +G A+TGSGKT AFALP+LQ
Sbjct: 4 SFSTLGLAPSLLNAIAEIGYDEPTAIQRAAIPAILRGEDVLGAAQTGSGKTAAFALPLLQ 63
Query: 67 KWCED---PYGIFALVLTPTRELAYQIGDQF--LVLGKVMNLRVSIITGGMDMVDQGKEL 121
++ P + LVL PTRELA Q+G+ LV M ++V+I+ GG+ + Q L
Sbjct: 64 SLLDNRDGPRQLHGLVLVPTRELAVQVGESIRKLVSHLSMPVKVAIVFGGVSINPQMMAL 123
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGRL D +D N ++R LVLDEADRL
Sbjct: 124 RGGADIVVATPGRLLDLID-HNALKISRAAMLVLDEADRL 162
>gi|126173892|ref|YP_001050041.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
gi|386340652|ref|YP_006037018.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|125997097|gb|ABN61172.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
gi|334863053|gb|AEH13524.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 451
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ PT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRSLSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ + F LN ++ LVLDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKHLF-LNGLELLVLDEADRM 159
>gi|332652507|ref|ZP_08418252.1| putative ATP-dependent RNA helicase RhlE [Ruminococcaceae bacterium
D16]
gi|332517653|gb|EGJ47256.1| putative ATP-dependent RNA helicase RhlE [Ruminococcaceae bacterium
D16]
Length = 628
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 71/158 (44%), Positives = 97/158 (61%), Gaps = 4/158 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL L P ++ + G + P+ IQ+ IP L D +GCA+TG+GKT AFA PILQ
Sbjct: 2 TFEDLGLCPQILAALKEEGYEKPSPIQEQAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 67 KWCEDP---YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P + I AL+LTPTRELA QIG+ F G+ + LR ++I GG+ Q ++L K
Sbjct: 62 RLSNKPASGHPIRALILTPTRELAIQIGESFEHYGRHLALRCAVIFGGVGQAPQVEKLGK 121
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ATPGRL D L LN ++ VLDEADR+
Sbjct: 122 GVDILVATPGRLGD-LYQQGFIHLNDLEIFVLDEADRM 158
>gi|148543481|ref|YP_001270851.1| DEAD/DEAH box helicase [Lactobacillus reuteri DSM 20016]
gi|184152890|ref|YP_001841231.1| ATP-dependent RNA helicase [Lactobacillus reuteri JCM 1112]
gi|227363631|ref|ZP_03847746.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus reuteri
MM2-3]
gi|227544701|ref|ZP_03974750.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus reuteri
CF48-3A]
gi|325681826|ref|ZP_08161345.1| ATP-dependent RNA helicase DeaD [Lactobacillus reuteri MM4-1A]
gi|338203780|ref|YP_004649925.1| ATP-dependent RNA helicase DeaD [Lactobacillus reuteri SD2112]
gi|148530515|gb|ABQ82514.1| DEAD/DEAH box helicase domain protein [Lactobacillus reuteri DSM
20016]
gi|183224234|dbj|BAG24751.1| ATP-dependent RNA helicase [Lactobacillus reuteri JCM 1112]
gi|227071342|gb|EEI09650.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus reuteri
MM2-3]
gi|227185302|gb|EEI65373.1| DEAD box ATP-dependent RNA helicase SrmB [Lactobacillus reuteri
CF48-3A]
gi|324978917|gb|EGC15865.1| ATP-dependent RNA helicase DeaD [Lactobacillus reuteri MM4-1A]
gi|336449020|gb|AEI57635.1| ATP-dependent RNA helicase DeaD [Lactobacillus reuteri SD2112]
Length = 498
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F++L L+ L++ + G + T IQ+ IP VL +D IG A+TG+GKT AF LPI++
Sbjct: 3 FSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLEGKDVIGQAQTGTGKTAAFGLPIIEN 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ I A++++PTRELA Q ++ LGK ++RV ++ GG D+ Q K L + P I
Sbjct: 63 VDTENLNIQAIIISPTRELAIQTQEELYRLGKDKHVRVQVVYGGADIRRQIKSLKQHPQI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DH++ +T L+ IK LVLDEAD +
Sbjct: 123 LVGTPGRLRDHINR-HTVKLDHIKTLVLDEADEM 155
>gi|15667450|dbj|BAB68226.1| putative autoaggregation-mediating protein [Enterococcus faecium]
Length = 210
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+
Sbjct: 2 KFKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PH
Sbjct: 62 KIDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPH 121
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 122 IVVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|423553834|ref|ZP_17530161.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus ISP3191]
gi|401182654|gb|EJQ89786.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus ISP3191]
Length = 528
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IPH L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + +V+ PTRELA Q+G++ +GK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|392988049|ref|YP_006486642.1| DEAD/DEAH box helicase [Enterococcus hirae ATCC 9790]
gi|392335469|gb|AFM69751.1| DEAD-box ATP dependent DNA helicase [Enterococcus hirae ATCC 9790]
Length = 503
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L+ +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLALSGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDTNRHELQGLVIAPTRELAIQTQEELYRLGRDKRVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVETLVLDEADEM 155
>gi|153000172|ref|YP_001365853.1| DEAD/DEAH box helicase [Shewanella baltica OS185]
gi|160874799|ref|YP_001554115.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|378708048|ref|YP_005272942.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|418026102|ref|ZP_12665075.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|151364790|gb|ABS07790.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
gi|160860321|gb|ABX48855.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
gi|315267037|gb|ADT93890.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|353534535|gb|EHC04104.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 451
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ PT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRSLSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ + F LN ++ LVLDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKHLF-LNGLELLVLDEADRM 159
>gi|456062808|ref|YP_007501778.1| DEAD/DEAH box helicase domain-containing protein [beta
proteobacterium CB]
gi|455440105|gb|AGG33043.1| DEAD/DEAH box helicase domain-containing protein [beta
proteobacterium CB]
Length = 472
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 9/163 (5%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F D L+P + + G TPT IQ IPHVL D +G A+TG+GKT AF LPI+Q
Sbjct: 25 TFADFGLDPKIQKAVSEQGYNTPTPIQAQSIPHVLAGSDLMGAAQTGTGKTAAFVLPIIQ 84
Query: 67 K------WCEDP--YGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQG 118
K P + I ALVLTPTRELA Q+ + K +LR +++ GG+DM +Q
Sbjct: 85 KILRHASSSASPARHPIRALVLTPTRELAVQVAENAANYSKHTDLRAAVVYGGVDMKEQV 144
Query: 119 KELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L I+IATPGRL DH+ + +L++++ LVLDEADR+
Sbjct: 145 AILRGGVEILIATPGRLLDHIGS-KVANLSQVEILVLDEADRM 186
>gi|120599366|ref|YP_963940.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|146292637|ref|YP_001183061.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|120559459|gb|ABM25386.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
gi|145564327|gb|ABP75262.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
Length = 449
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ PT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSLKHMGITAPTAIQEQTLPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRSLSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ + F LN ++ L+LDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKHLF-LNGLELLILDEADRM 159
>gi|345328224|ref|XP_001507068.2| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Ornithorhynchus anatinus]
Length = 716
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP + +D CA TG+GKT AFALP+L+
Sbjct: 139 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGMLGKDICACAATGTGKTAAFALPVLE 198
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + N+ + GG+D+ Q L
Sbjct: 199 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFSNVTTCLAVGGLDVKTQEAALRA 258
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 259 GPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 296
>gi|399025475|ref|ZP_10727471.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
gi|398077852|gb|EJL68799.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
Length = 329
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 96/158 (60%), Gaps = 4/158 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL L +IR G PTEIQ IPH+L +D IGCA+TG+GKT AFA+PILQ
Sbjct: 35 SFKDLNLINPIIRAVTEAGYSKPTEIQYTAIPHILAGKDIIGCAQTGTGKTAAFAMPILQ 94
Query: 67 ---KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
K+ D I L+LTPTRELA QI + F V K + L + GG+ Q L K
Sbjct: 95 LLKKYTPDHKEIRTLILTPTRELAIQIEENFAVYSKYLPLSQLSVYGGVPAGGQLAALRK 154
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I++ATPGRL D ++ + L++I+ VLDEADR+
Sbjct: 155 RVDILVATPGRLLDLVNQRH-IDLSKIEIFVLDEADRM 191
>gi|312868913|ref|ZP_07729097.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus oris
PB013-T2-3]
gi|311095562|gb|EFQ53822.1| DEAD-box ATP-dependent RNA helicase CshA [Lactobacillus oris
PB013-T2-3]
Length = 498
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F++L L+ L++ + G + T IQ+ IP VL +D IG A+TG+GKT AF LPI++
Sbjct: 3 FSELGLSQSLLKAIKRSGYEEATPIQEQTIPMVLKGQDVIGQAQTGTGKTAAFGLPIIEH 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D I AL+++PTRELA Q ++ LGK ++RV ++ GG D+ Q K L P I
Sbjct: 63 VDTDNPNIQALIISPTRELAIQTQEELYRLGKDKHVRVQVVYGGADIRRQIKSLKHHPQI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
++ TPGRL DH++ +T L I+ LVLDEAD +
Sbjct: 123 LVGTPGRLRDHINR-HTVKLGHIQTLVLDEADEM 155
>gi|423456146|ref|ZP_17432999.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG5X1-1]
gi|401131812|gb|EJQ39461.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG5X1-1]
Length = 520
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IP+ L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPYALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ LGK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKLGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|255101321|ref|ZP_05330298.1| ATP-dependent RNA helicase [Clostridium difficile QCD-63q42]
Length = 497
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F KLN +++ +++G P+ +Q+ +IP +L ++ + +KTGSGKT +FA+P+ +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
D I AL++ PTRELA Q+ D+ +G++ +R S I G + DQ EL ++ H
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGR+ DH++ + L +K+LV+DEAD++
Sbjct: 124 IVVATPGRILDHINR-GSIKLENVKYLVIDEADKM 157
>gi|386313316|ref|YP_006009481.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|319425941|gb|ADV54015.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 449
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FTD L+ L++ + +G+ PT IQ+ +P L +D + +KTGSGKTLAF LP LQ+
Sbjct: 3 FTDFSLDQRLLQSLKHMGITAPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
DP L+L PTRELA+Q+ Q +L + + GG + DQ K
Sbjct: 63 VISTRSLSKRDPR---VLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LAK+PH ++ATPGR+ADHL+ + F LN ++ L+LDEADR+
Sbjct: 120 LAKEPHFIVATPGRIADHLEQKHLF-LNGLELLILDEADRM 159
>gi|126699799|ref|YP_001088696.1| ATP-dependent RNA helicase [Clostridium difficile 630]
gi|115251236|emb|CAJ69067.1| ATP-dependent RNA helicase [Clostridium difficile 630]
Length = 497
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F KLN +++ +++G P+ +Q+ +IP +L ++ + +KTGSGKT +FA+P+ +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
D I AL++ PTRELA Q+ D+ +G++ +R S I G + DQ EL ++ H
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGR+ DH++ + L +K+LV+DEAD++
Sbjct: 124 IVVATPGRILDHINR-GSIKLENVKYLVIDEADKM 157
>gi|315641802|ref|ZP_07896806.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
gi|315482477|gb|EFU73016.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
Length = 522
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L+ D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKAVERSGFEEATPIQSETIPLALSGRDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ LV++PTRELA Q ++ LGK +RV + GG D+ Q ++L +PHI
Sbjct: 63 IDTSSSHLQGLVISPTRELAIQTQEELYRLGKDKKVRVMAVYGGADIGRQIRQLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLETVETLVLDEADEM 155
>gi|212558407|gb|ACJ30861.1| ATP-dependent RNA helicase, DEAD box family [Shewanella
piezotolerans WP3]
Length = 432
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T IQ+ IP V +D + A+TG+GKT AF+LPILQK
Sbjct: 3 FESFSFAPEILRAISECGYQKMTPIQQQAIPAVRRGQDVLASAQTGTGKTAAFSLPILQK 62
Query: 68 WCEDPYGI-----FALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
++P AL+LTPTRELA QI D K + + V I GG+ M Q +L
Sbjct: 63 MLDNPSATQRSNARALILTPTRELAAQIADNINDYAKYLEVNVVTIVGGVKMDSQATKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I+IATPGRL +H+ CN SL+ + FLVLDEADR+
Sbjct: 123 RGADIIIATPGRLLEHIVACN-LSLSNVDFLVLDEADRM 160
>gi|116333167|ref|YP_794694.1| superfamily II DNA/RNA helicase [Lactobacillus brevis ATCC 367]
gi|116098514|gb|ABJ63663.1| Superfamily II DNA and RNA helicase [Lactobacillus brevis ATCC 367]
Length = 523
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L L+ L++ ++G + T IQ IP VL +D IG A+TG+GKT AFALPIL+K
Sbjct: 3 FKELGLSEDLLKAITSVGYEEATPIQAETIPMVLAGQDVIGQAQTGTGKTAAFALPILEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ + ALV++PTRELA Q ++ LG+ V ++ GG D+ Q K L P +
Sbjct: 63 IDKSNENVQALVVSPTRELAIQTQEEIYKLGRTERANVQVVYGGADIRRQIKSLKNHPQV 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGRL DH+ +T L+ ++ LVLDEAD +
Sbjct: 123 VVGTPGRLLDHI-RRHTLKLDHVQMLVLDEADEM 155
>gi|266619246|ref|ZP_06112181.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
gi|288869241|gb|EFD01540.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
Length = 432
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 99/161 (61%), Gaps = 7/161 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F DL+L+ L++ + G TP+ IQ+ IPHVL +D +GCA+TG+GKT AFALPI+Q
Sbjct: 2 TFKDLQLSAPLLKALEEKGYTTPSPIQEKAIPHVLAGKDVLGCAQTGTGKTAAFALPIIQ 61
Query: 67 KWC------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
I +L+LTPTRELA QI + F G +R ++I GG+ V Q KE
Sbjct: 62 NLMRPSDKKHSKRVIRSLILTPTRELALQIAENFKEYGSHTPVRCAVIFGGVSAVPQIKE 121
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L + I++ATPGRL D L SL+ ++ VLDEADR+
Sbjct: 122 LQRGIDILVATPGRLND-LIHQGEISLSHVEMFVLDEADRM 161
>gi|351703078|gb|EHB05997.1| Putative ATP-dependent RNA helicase DDX27 [Heterocephalus glaber]
Length = 765
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 188 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 247
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + ++ + GG+D+ Q L
Sbjct: 248 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCSITTCLAVGGLDVKSQEAALRA 307
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 308 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 345
>gi|255307197|ref|ZP_05351368.1| ATP-dependent RNA helicase [Clostridium difficile ATCC 43255]
Length = 497
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F KLN +++ +++G P+ +Q+ +IP +L ++ + +KTGSGKT +FA+P+ +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
D I AL++ PTRELA Q+ D+ +G++ +R S I G + DQ EL ++ H
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
IV+ATPGR+ DH++ + L +K+LV+DEAD++
Sbjct: 124 IVVATPGRILDHINR-GSIKLENVKYLVIDEADKM 157
>gi|183222181|ref|YP_001840177.1| ATP-dependent RNA helicase RhlE [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912238|ref|YP_001963793.1| superfamily II DNA and RNA helicase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167776914|gb|ABZ95215.1| Superfamily II DNA and RNA helicase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167780603|gb|ABZ98901.1| ATP-dependent RNA helicase RhlE [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 471
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 107/186 (57%), Gaps = 9/186 (4%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M+ I++F+DLKL+ ++ + G PT IQ IP +L++ D +GCA+TG+GKT AF
Sbjct: 1 MQKQIETFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAF 60
Query: 61 ALPILQKWCE-----DPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMV 115
ALP++ +P +LVL PTRELA Q+ + F++ GK +R ++I GG+
Sbjct: 61 ALPMIHNLISTRAKPNPKQPRSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVGQN 120
Query: 116 DQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLKFFFFFFF 175
Q K +A ++IATPGRL D L N SL ++ VLDEADR M + F
Sbjct: 121 PQAKAIASGLDVLIATPGRLVD-LMNQNLVSLKNLEIFVLDEADR---MLDMGFIHDIRK 176
Query: 176 LKYYIP 181
+ Y+P
Sbjct: 177 IISYLP 182
>gi|288554498|ref|YP_003426433.1| ATP-dependent RNA helicase [Bacillus pseudofirmus OF4]
gi|288545658|gb|ADC49541.1| ATP-dependent RNA helicase [Bacillus pseudofirmus OF4]
Length = 502
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F + LN ++R +G + T IQ A IP L +D IG A+TG+GKT AF +P++
Sbjct: 3 TFYEFGLNSEVVRAVTQMGFEEATPIQAATIPTALEGKDIIGQAQTGTGKTGAFGVPLID 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ + + AL+L PTRELA Q+ + GK +R ++ GG DM Q ++L KPH
Sbjct: 63 RINIENDHVQALILAPTRELANQVAESLFKFGKYKGVRTVVVYGGQDMRKQIRDLKNKPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+V+ATPGRL DH+ T L +++ +VLDEAD +
Sbjct: 123 VVVATPGRLMDHM-RRKTIRLGQVETVVLDEADEM 156
>gi|424762589|ref|ZP_18190093.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TX1337RF]
gi|431757804|ref|ZP_19546433.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
gi|402424479|gb|EJV56656.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
TX1337RF]
gi|430618309|gb|ELB55156.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
Length = 503
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALVGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|54308937|ref|YP_129957.1| ATP-dependent RNA helicase [Photobacterium profundum SS9]
gi|46913367|emb|CAG20155.1| putative ATP-dependent RNA helicase, DEAD boxfamily [Photobacterium
profundum SS9]
Length = 422
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 98/167 (58%), Gaps = 13/167 (7%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L LN L+ +G KTPT IQ+ IP VL +D + A+TG+GKT AF LP++Q
Sbjct: 2 SFQALGLNTQLVDTVTELGFKTPTPIQEQAIPQVLAGDDIMAGAQTGTGKTAAFGLPMIQ 61
Query: 67 K------------WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDM 114
+ + + P I ALVLTPTRELA Q+ D L K +++V++ GG M
Sbjct: 62 RLLASQQSEHDEGYIKKPEAIRALVLTPTRELAQQVHDSILAYSKNTSIKVAVAYGGTSM 121
Query: 115 VDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
Q K L I+IATPGRL DH T T L++I+ LVLDEADR+
Sbjct: 122 GVQVKALKSGVDILIATPGRLLDHAFT-GTVDLSKIECLVLDEADRM 167
>gi|423473254|ref|ZP_17449996.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6O-2]
gi|402426406|gb|EJV58531.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus cereus BAG6O-2]
Length = 535
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F +L L+ L++ +++G + T IQ IP+ L +D IG A+TG+GKT AF LP+L
Sbjct: 3 TFRELGLSESLLQSVESMGFEEATPIQAETIPYALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
K + + +V+ PTRELA Q+G++ LGK +R+ I GG D+ Q + L K PH
Sbjct: 63 KVDTNKEAVQGIVIAPTRELAIQVGEELYKLGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 127 IVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
I++ TPGR+ DH++ T L ++ +VLDEAD +
Sbjct: 123 IIVGTPGRILDHINR-KTLRLQNVETVVLDEADEM 156
>gi|445059172|ref|YP_007384576.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
gi|443425229|gb|AGC90132.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
Length = 509
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+++F +L ++ ++ +++G K PT IQK IP+ L D +G A+TG+GKT AF +P+
Sbjct: 1 MQNFKELGISDKTVQTLESMGFKEPTPIQKDSIPYALEGHDILGQAQTGTGKTGAFGIPL 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
++K + G+ +L+L PTRELA Q+ +Q V K N++V + GGM + Q K L K
Sbjct: 61 IEKVVGE-QGVQSLILAPTRELAMQVAEQLKVFSKGQNVQVVTVFGGMPIERQIKALKKG 119
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLKFFFFFFFLKYYIPS 182
P IV+ TPGR+ DHL+ T N I L+LDEAD M ++ F F+ IP+
Sbjct: 120 PQIVVGTPGRVIDHLNR-RTLKTNDIHTLILDEADE---MMNMGFIDDMRFIMDKIPA 173
>gi|124249330|ref|NP_694705.2| probable ATP-dependent RNA helicase DDX27 [Mus musculus]
gi|341940504|sp|Q921N6.3|DDX27_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|74140985|dbj|BAE22077.1| unnamed protein product [Mus musculus]
gi|74210620|dbj|BAE23664.1| unnamed protein product [Mus musculus]
gi|148674548|gb|EDL06495.1| mCG14602, isoform CRA_c [Mus musculus]
Length = 760
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 185 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 244
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + ++ + GG+D+ Q L
Sbjct: 245 RLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRA 304
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 305 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 342
>gi|348564128|ref|XP_003467857.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Cavia
porcellus]
Length = 803
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF D+ L+ L++ +G K PT IQKA IP L +D CA TG+GKT AFALP+L+
Sbjct: 226 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 285
Query: 67 KWCEDPYG---IFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+ P LVL PTREL Q+ L + ++ + GG+D+ Q L
Sbjct: 286 RLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRA 345
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
P I+IATPGRL DHL C +F L+ I+ L+LDEADR+
Sbjct: 346 APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 383
>gi|227550862|ref|ZP_03980911.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257887886|ref|ZP_05667539.1| helicase [Enterococcus faecium 1,141,733]
gi|257893315|ref|ZP_05672968.1| helicase [Enterococcus faecium 1,231,408]
gi|293379275|ref|ZP_06625421.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|431036552|ref|ZP_19492322.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|431752972|ref|ZP_19541651.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|431763081|ref|ZP_19551634.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
gi|227179960|gb|EEI60932.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257823940|gb|EEV50872.1| helicase [Enterococcus faecium 1,141,733]
gi|257829694|gb|EEV56301.1| helicase [Enterococcus faecium 1,231,408]
gi|292642071|gb|EFF60235.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|430563092|gb|ELB02323.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|430612933|gb|ELB49957.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|430622775|gb|ELB59485.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
Length = 503
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALVGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|257896496|ref|ZP_05676149.1| helicase [Enterococcus faecium Com12]
gi|257833061|gb|EEV59482.1| helicase [Enterococcus faecium Com12]
Length = 503
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F +L+L+P L++ + G + T IQ IP L +D IG A+TG+GKT AF LP+L+K
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLALVGKDVIGQAQTGTGKTAAFGLPMLEK 62
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
D + + LV+ PTRELA Q ++ LG+ +RV + GG D+ Q + L +PHI
Sbjct: 63 IDPDRHELQGLVIAPTRELAIQTQEELYRLGRDKKVRVQAVYGGADIGRQIRGLKDRPHI 122
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGR+ DH++ +T L ++ LVLDEAD +
Sbjct: 123 VVGTPGRMLDHINR-HTLKLGTVQTLVLDEADEM 155
>gi|90412948|ref|ZP_01220947.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium profundum 3TCK]
gi|90326127|gb|EAS42561.1| putative ATP-dependent RNA helicase, DEAD box family protein
[Photobacterium profundum 3TCK]
Length = 422
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 98/167 (58%), Gaps = 13/167 (7%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L LN L+ +G KTPT IQ+ IP VL +D + A+TG+GKT AF LP++Q
Sbjct: 2 SFQALGLNTQLVDTVTELGFKTPTPIQEQAIPQVLAGDDIMAGAQTGTGKTAAFGLPMIQ 61
Query: 67 K------------WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDM 114
+ + + P I ALVLTPTRELA Q+ D L K +++V++ GG M
Sbjct: 62 RLLASQQSEHDEGYIKKPEAIRALVLTPTRELAQQVHDSILAYSKNTSIKVAVAYGGTSM 121
Query: 115 VDQGKELAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
Q K L I+IATPGRL DH T T L++I+ LVLDEADR+
Sbjct: 122 GVQVKALKSGVDILIATPGRLLDHAFT-GTVDLSKIECLVLDEADRM 167
>gi|119774410|ref|YP_927150.1| DEAD/DEAH box helicase [Shewanella amazonensis SB2B]
gi|119766910|gb|ABL99480.1| DEAD/DEAH box helicase-like protein [Shewanella amazonensis SB2B]
Length = 456
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F+D L+ L++ + +G++TPT IQ IP L +D + +KTGSGKTLAF LP +Q+
Sbjct: 3 FSDFSLDKRLMQSLKHMGIETPTPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAMQR 62
Query: 68 WC-------EDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
+DP L+L PTRELA Q+ Q +L R + GG + DQ K
Sbjct: 63 VISSKALSKKDPR---VLILLPTRELAQQVYAQLRLLVANTQYRAISVLGGENFNDQAKA 119
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
LA++PH ++ATPGR+ADHL + F LN ++ LVLDEADR+
Sbjct: 120 LAREPHFIVATPGRIADHLQQRHLF-LNGLELLVLDEADRM 159
>gi|417644460|ref|ZP_12294450.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus warneri
VCU121]
gi|330684829|gb|EGG96522.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU121]
Length = 509
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+++F +L ++ ++ +++G K PT IQK IP+ L D +G A+TG+GKT AF +P+
Sbjct: 1 MQNFKELGISDKTVQTLESMGFKEPTPIQKDSIPYALEGHDILGQAQTGTGKTGAFGIPL 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
++K + G+ +L+L PTRELA Q+ +Q V K N++V + GGM + Q K L K
Sbjct: 61 IEKVVGE-QGVQSLILAPTRELAMQVAEQLKVFSKGQNVQVVTVFGGMPIERQIKALKKG 119
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLKFFFFFFFLKYYIPS 182
P IV+ TPGR+ DHL+ T N I L+LDEAD M ++ F F+ IP+
Sbjct: 120 PQIVVGTPGRVIDHLNR-RTLKTNDIHTLILDEADE---MMNMGFIDDMRFIMDKIPA 173
>gi|300779124|ref|ZP_07088982.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
gi|300504634|gb|EFK35774.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC 35910]
Length = 373
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 4/158 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L L +IR G PTEIQ IPH+L +D IGCA+TG+GKT AFA+PILQ
Sbjct: 3 SFKSLNLINAIIRAVTEAGYSKPTEIQYTAIPHILAGKDIIGCAQTGTGKTAAFAMPILQ 62
Query: 67 ---KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
K+ D I L+LTPTRELA QI + F V K + L I GG+ Q L K
Sbjct: 63 LLKKYTPDHKEIRTLILTPTRELAIQIEENFAVYSKYLPLSQLSIYGGVSAGGQLAALRK 122
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I++ATPGRL D ++ + L++I+ VLDEADR+
Sbjct: 123 RVDILVATPGRLLDLVNQRH-IDLSKIEIFVLDEADRM 159
>gi|239637375|ref|ZP_04678357.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
gi|239596975|gb|EEQ79490.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
Length = 509
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+++F +L ++ ++ +++G K PT IQK IP+ L D +G A+TG+GKT AF +P+
Sbjct: 1 MQNFKELGISDKTVQTLESMGFKEPTPIQKDSIPYALEGHDILGQAQTGTGKTGAFGIPL 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
++K + G+ +L+L PTRELA Q+ +Q V K N++V + GGM + Q K L K
Sbjct: 61 IEKVVGE-QGVQSLILAPTRELAMQVAEQLKVFSKGQNVQVVTVFGGMPIERQIKALKKG 119
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRLSLMTSLKFFFFFFFLKYYIPS 182
P IV+ TPGR+ DHL+ T N I L+LDEAD M ++ F F+ IP+
Sbjct: 120 PQIVVGTPGRVIDHLNR-RTLKTNDIHTLILDEADE---MMNMGFIDDMRFIMDKIPA 173
>gi|328956669|ref|YP_004374055.1| ATP-dependent RNA helicase; cold shock [Carnobacterium sp. 17-4]
gi|328672993|gb|AEB29039.1| ATP-dependent RNA helicase; cold shock [Carnobacterium sp. 17-4]
Length = 533
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
FT+L L P L++ + +G + T IQ IP L +D IG A+TG+GKT AF LP+LQK
Sbjct: 8 FTELGLAPELLKSVERLGFEEATPIQAQTIPLALEGKDVIGQAQTGTGKTAAFGLPMLQK 67
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
+ + LV+ PTRELA Q ++ L + +RV ++ GG D+ Q + L PHI
Sbjct: 68 IDVNNRNVQGLVIAPTRELAIQTQEELFRLSRDKKIRVQVVYGGADISRQIRALKDAPHI 127
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+ TPGRL DH+ T L ++ LVLDEAD +
Sbjct: 128 VVGTPGRLLDHI-KRKTLKLGHVETLVLDEADEM 160
>gi|24372961|ref|NP_717003.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
gi|24347107|gb|AAN54448.1| ATP-dependent RNA helicase DEAD box family [Shewanella oneidensis
MR-1]
Length = 433
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F P ++R G + T IQ+ IP + +D + A+TG+GKT AFALPILQK
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 68 WCEDPYGIF-----ALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
E+P L+LTPTRELA Q+ + K +N V I GG+ + Q ++L
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 123 KKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
+ I++ATPGRL +HL CN SL+ + FLVLDEADR+
Sbjct: 123 RGADIIVATPGRLLEHLTACN-LSLSSVDFLVLDEADRM 160
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.143 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,883,230,238
Number of Sequences: 23463169
Number of extensions: 114574637
Number of successful extensions: 391427
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 23788
Number of HSP's successfully gapped in prelim test: 3879
Number of HSP's that attempted gapping in prelim test: 316953
Number of HSP's gapped (non-prelim): 29278
length of query: 182
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 49
effective length of database: 9,238,593,890
effective search space: 452691100610
effective search space used: 452691100610
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 72 (32.3 bits)