BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4275
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y6V7|DDX49_HUMAN Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens GN=DDX49
PE=1 SV=1
Length = 483
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F +L L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTFS+ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRL 157
>sp|Q4FZF3|DDX49_MOUSE Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49
PE=2 SV=1
Length = 480
Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
+ F ++ L+ WL+ QC+ +G+K PT +Q IP +L DC+GCAKTGSGKT AF LPI
Sbjct: 1 MAGFAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
LQK EDPYGIF LVLTPTRELAYQI +QF VLGK + L+ II GGMDMV Q EL++K
Sbjct: 61 LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK 120
Query: 125 PHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
PH+VIATPGRLADHL + NTF++ +I+FLV+DEADRL
Sbjct: 121 PHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRL 157
>sp|Q9HGM5|DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp8 PE=3 SV=1
Length = 453
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 121/163 (74%), Gaps = 3/163 (1%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E KSF+DL ++PWLI + + + PT+IQ+ +I +L +CIG AKTGSGKT AFA
Sbjct: 3 EHTRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFA 62
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPI++KW +DP GIFAL+LTPTRELA QI +QF LG +NL+ ++I GGMDM+ Q +L
Sbjct: 63 LPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDL 122
Query: 122 AKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+K+PH+V+ATPGRLAD + + + L RIKFLV+DEADRL
Sbjct: 123 SKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRL 165
>sp|A5DLE0|DBP8_PICGU ATP-dependent RNA helicase DBP8 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP8 PE=3 SV=2
Length = 433
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 114/160 (71%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ WL+ + +++PT IQ IP +L DCIG AKTGSGKT+AFA P++
Sbjct: 2 SFKDLGVSKWLLEALAAMKIRSPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GI+ LVLTPTRELA QI +QFL LG MN++V+++ GG DMV Q E+ K PH
Sbjct: 62 KWSEDPFGIYGLVLTPTRELALQIAEQFLALGASMNIKVAVVVGGEDMVKQALEIQKSPH 121
Query: 127 IVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
+IATPGRLADH+ DT L RIKFLVLDEADRL
Sbjct: 122 FIIATPGRLADHILNSGDDTVG--GLKRIKFLVLDEADRL 159
>sp|Q07886|DDX49_DROME Probable ATP-dependent RNA helicase Dbp45A OS=Drosophila
melanogaster GN=Dbp45A PE=2 SV=2
Length = 521
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 116/154 (75%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L PWL++Q +G+K T IQ+ IP +L +DCIG AKTGSGKT AFALPIL++
Sbjct: 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
E+P FALVLTPT ELAYQI +QFLV G+ M +RV +++GG D + + ++L ++PHI
Sbjct: 69 LSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
Query: 128 VIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
V+A PGRLADHL C+TFS + +K+LV+DEADR+
Sbjct: 129 VVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRM 162
>sp|A5AA68|DBP8_ASPNC ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp8 PE=3 SV=1
Length = 522
Score = 191 bits (485), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 117/164 (71%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ D SF L + PWLI T+ V+ PT IQKA IP +LN DCIG ++TGSGKT+AF
Sbjct: 87 LNDAQNSFASLNVAPWLIGSLTTMAVRKPTAIQKACIPEILNGRDCIGGSRTGSGKTIAF 146
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP+GIF LVLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 147 SVPMLQKWAEDPFGIFGLVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRPQAVA 206
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA++PH+VIATPGRLADH++T + + L R++ +VLDEADRL
Sbjct: 207 LAQRPHVVIATPGRLADHINTSGSDTIRGLKRVRMVVLDEADRL 250
>sp|A3LP87|DBP8_PICST ATP-dependent RNA helicase DBP8 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP8 PE=3 SV=2
Length = 445
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL ++ WL + + TPT IQ IP +L+ DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFEDLGVSRWLSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIF LVLTPTRELA QI +QF LG MN+++S++ GG D V Q EL KKPH
Sbjct: 62 QWSEDPFGIFGLVLTPTRELALQIAEQFAALGASMNIKISVVVGGEDFVKQTLELQKKPH 121
Query: 127 IVIATPGRLADHLDTC--NTFS-LNRIKFLVLDEADRL 161
VIATPGRLADH+ T S L RIK+LVLDEADRL
Sbjct: 122 FVIATPGRLADHILNSGEETISGLRRIKYLVLDEADRL 159
>sp|Q4I662|DBP8_GIBZE ATP-dependent RNA helicase DBP8 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP8 PE=3
SV=1
Length = 547
Score = 190 bits (483), Expect = 4e-48, Method: Composition-based stats.
Identities = 86/162 (53%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
DP +F+ L + PWL++ + + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 113 DPNTTFSALDVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAV 172
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP IFA+VLTPTRELA QI +QF + +L+ ++TGG DM Q E+
Sbjct: 173 PILQKWSEDPTAIFAVVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRTQAIEIG 232
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH++IATPGRLADH+ T + L R++++VLDEADRL
Sbjct: 233 KRPHVIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 274
>sp|Q5B3H7|DBP8_EMENI ATP-dependent RNA helicase dbp8 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp8
PE=3 SV=1
Length = 525
Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + PWL+ T+ V+ PT IQ+A IP +L DCIG ++TGSGKT+AF++PILQ
Sbjct: 96 SFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQ 155
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA++LTPTRELA QI +Q + +++ +ITGG DM Q ELA +PH
Sbjct: 156 KWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQAIELAGRPH 215
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+V+ATPGRLADH++T T L R++ +VLDEADRL
Sbjct: 216 VVVATPGRLADHINTSGTDTVAGLKRVRMVVLDEADRL 253
>sp|A6SFV4|DBP8_BOTFB ATP-dependent RNA helicase dbp8 OS=Botryotinia fuckeliana (strain
B05.10) GN=dbp8 PE=3 SV=1
Length = 545
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL+ ++ +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 113 DAQTTFAALNVKPWLVGSLGSMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 172
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP+GIFALVLTPTRELA QI +QF + +L+ +ITGG DM Q LA
Sbjct: 173 PILQKWAEDPFGIFALVLTPTRELALQIYEQFKAISSPQSLKAVLITGGSDMRPQATALA 232
Query: 123 KKPHIVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
++PHIVIATPGRLADH+ T +L R++ +VLDEADRL
Sbjct: 233 QRPHIVIATPGRLADHIRTSGEDTIGALRRVRMVVLDEADRL 274
>sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP8 PE=3 SV=2
Length = 441
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF +L ++ WL ++ + TPT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP GI+ LVLTPTRELA QI +QF LG MN++VS+I GG D+V Q EL ++PH
Sbjct: 62 QWSEDPSGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALELQRRPH 121
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
V+ATPGRLADH+ + L R+K+L+LDEADRL
Sbjct: 122 FVVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRL 159
>sp|A7E436|DBP8_SCLS1 ATP-dependent RNA helicase dbp8 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp8 PE=3 SV=1
Length = 540
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 113/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL+ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 108 DAQTTFAALDVKPWLVASLGAMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 167
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQKW EDP+GIFALVLTPTRELA QI +QF + +L+ +ITGG DM Q LA
Sbjct: 168 PILQKWAEDPFGIFALVLTPTRELALQIYEQFKAISSPQSLKAVLITGGSDMRPQATALA 227
Query: 123 KKPHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRL 161
++PH+VIATPGRLADH+ T +L R++ +VLDEADRL
Sbjct: 228 QRPHVVIATPGRLADHIRTSGEDTVCALRRVRMVVLDEADRL 269
>sp|Q0CNX1|DBP8_ASPTN ATP-dependent RNA helicase dbp8 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp8 PE=3 SV=1
Length = 527
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 113/158 (71%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF L + PWLI T+ V+ PT IQ+A IP +L DCIG ++TGSGKT+AFA+PILQ
Sbjct: 87 SFKALNVAPWLIGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFAVPILQ 146
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP+GIFA+VLTPTRELA QI +QF + +++ +ITGG DM Q L+++PH
Sbjct: 147 KWAEDPFGIFAVVLTPTRELALQIYEQFKAISAPQSMKPVLITGGTDMRPQALALSQRPH 206
Query: 127 IVIATPGRLADHLDTCN---TFSLNRIKFLVLDEADRL 161
+VIATPGRLADH+ T L R++ +VLDEADRL
Sbjct: 207 VVIATPGRLADHIQTSGEDTVRGLKRVRMVVLDEADRL 244
>sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRP3 PE=3 SV=1
Length = 484
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 111/156 (71%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL ++P L R C ++G K P++IQ IPH L +D IG A+TGSGKT AF+LPIL
Sbjct: 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E+P FALVL PTRELAYQI Q LG + +R +++ GGMDM+ Q L+K+P
Sbjct: 98 QTLWENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRP 157
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 158 HIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRL 193
>sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRP3 PE=3 SV=1
Length = 484
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 111/156 (71%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F DL ++P L R C ++G K P++IQ IPH L +D IG A+TGSGKT AF+LPIL
Sbjct: 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E+P FALVL PTRELAYQI Q LG + +R +++ GGMDM+ Q L+K+P
Sbjct: 98 QTLWENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRP 157
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 158 HIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRL 193
>sp|Q6C799|DBP8_YARLI ATP-dependent RNA helicase DBP8 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP8 PE=3 SV=1
Length = 442
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 113/160 (70%), Gaps = 7/160 (4%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SFTDL L WL + + P+ IQKA IP ++ +DCIG A+TGSGKT+AFA P+L
Sbjct: 2 SFTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLA 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W +DP GIF LVLTPTRELA QI +QF LG MN+RV++I GG+DMV Q EL K PH
Sbjct: 62 EWSKDPCGIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDMVKQSLELQKMPH 121
Query: 127 IVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEADRL 161
VIATPGRLADH+ DT F R++++V+DEADRL
Sbjct: 122 FVIATPGRLADHIRSSGEDTIRGF--RRVRYVVMDEADRL 159
>sp|Q59PR3|DBP8_CANAL ATP-dependent RNA helicase DBP8 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP8 PE=3 SV=1
Length = 440
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF DL + WL + + TPT IQ A IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIF L+LTPTRELA QI +QF LG MN++V+++ GG D V Q L +KPH
Sbjct: 62 QWSEDPFGIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKPH 121
Query: 127 IVIATPGRLADHLDTC--NTFS-LNRIKFLVLDEADRL 161
VIATPGRLADH+ T S L R+K+LVLDEADRL
Sbjct: 122 FVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRL 159
>sp|Q756G5|DBP8_ASHGO ATP-dependent RNA helicase DBP8 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP8
PE=3 SV=1
Length = 435
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 111/164 (67%), Gaps = 7/164 (4%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
M D +F DL + WL ++ + PT IQKA IP +L DCIG AKTGSGKT+AF
Sbjct: 1 MSDSNSTFKDLGVAKWLAEALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAF 60
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
A P+L KW DP G+F +VLTPTRELA QI +QF LG VMN+RV+++ GG D+V Q E
Sbjct: 61 AAPMLTKWSADPCGMFGIVLTPTRELAMQIAEQFTALGSVMNIRVALVVGGEDIVSQALE 120
Query: 121 LAKKPHIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
L +KPH +IATPGRLA H+ DT L R+++LVLDEAD
Sbjct: 121 LQRKPHFIIATPGRLAHHIMHSGEDTIG--GLKRVRYLVLDEAD 162
>sp|Q1E0Z3|DBP8_COCIM ATP-dependent RNA helicase DBP8 OS=Coccidioides immitis (strain RS)
GN=DBP8 PE=3 SV=1
Length = 536
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF+ L L PWL+ + ++ PT IQ+A IP +L DCIG ++TGSGKT+AFA PIL
Sbjct: 107 SFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPILH 166
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+W EDP+GIFA+VLTPTRELA QI +QF + +L+ +ITGG +M Q L+ +PH
Sbjct: 167 RWSEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPH 226
Query: 127 IVIATPGRLADHLDTCNT---FSLNRIKFLVLDEADRL 161
+VIATPGRLADH+ T + LNR++ +VLDEADRL
Sbjct: 227 VVIATPGRLADHIKTSGQDTIYGLNRVRMVVLDEADRL 264
>sp|A1CKJ0|DBP8_ASPCL ATP-dependent RNA helicase dbp8 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp8 PE=3 SV=1
Length = 523
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ + SF+ L + PWL+ T+ V+ PT IQKA IP +LN +DCIG ++TGSGKT+AF
Sbjct: 88 LREEASSFSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILNGKDCIGGSRTGSGKTIAF 147
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP GIF L+LTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 148 SVPMLQKWAEDPLGIFGLILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQALA 207
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA +PH+V+ATPGRLADH+ + + L R++ +VLDEADRL
Sbjct: 208 LAGRPHVVVATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRL 251
>sp|A5E0U9|DBP8_LODEL ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP8 PE=3 SV=1
Length = 444
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 111/159 (69%), Gaps = 3/159 (1%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
+SF +L + WL + + + +PT IQ A IP +L DCIG AKTGSGKT+AFA +L
Sbjct: 3 QSFKELGVAKWLSESLEAMKIHSPTSIQSACIPEILKGRDCIGGAKTGSGKTIAFAALML 62
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+W +DP+GIF L+LTPTRELA QI +QF LG +MN++V ++ GG D V Q EL KKP
Sbjct: 63 TQWSQDPFGIFGLILTPTRELALQIAEQFAALGALMNIKVCVVVGGEDFVKQTLELQKKP 122
Query: 126 HIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
H VIATPGRLADH+ + L RIK+LVLDEADRL
Sbjct: 123 HFVIATPGRLADHILNSGEETVSGLRRIKYLVLDEADRL 161
>sp|Q2UKX3|DBP8_ASPOR ATP-dependent RNA helicase dbp8 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp8 PE=3 SV=1
Length = 443
Score = 183 bits (464), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 114/156 (73%), Gaps = 3/156 (1%)
Query: 9 TDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQKW 68
T L ++PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AFA+PILQKW
Sbjct: 16 TTLNVSPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFAVPILQKW 75
Query: 69 CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHIV 128
+DP+GIFA+VLTPTRELA QI +Q + +++ +ITGG DM Q L+++PH+V
Sbjct: 76 AQDPFGIFAVVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRSQALALSQRPHVV 135
Query: 129 IATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
IATPGRLADH++T + L R++ +VLDEADRL
Sbjct: 136 IATPGRLADHINTSGEDTVCGLKRVRMVVLDEADRL 171
>sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain
RS) GN=RRP3 PE=3 SV=1
Length = 474
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 107/156 (68%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C ++G K PT+IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 48 KSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 107
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI QF LG ++++R ++I GGMDMV Q L KKP
Sbjct: 108 QALMDKPQSMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKP 167
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 203
>sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium
discoideum GN=ddx49 PE=3 SV=1
Length = 508
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L WL+ C+ +G K P+ IQ IP +L D I AKTGSGKT +FA+PIL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+ EDPYG+FA++LTPTRELA QIG+QF +G MN+ S++ GG+D V Q L K+P
Sbjct: 64 NQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRP 123
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRLA HL+ +L KFLVLDEADRL
Sbjct: 124 HIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRL 159
>sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rrp3 PE=3 SV=1
Length = 473
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C T+G K PT IQ IP L D D IG A+TGSGKT AFALPIL
Sbjct: 53 KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPIL 112
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVL PTRELA+QI F LG +N+R ++I GGMDMV Q L KKP
Sbjct: 113 QALMDKPQSFFGLVLAPTRELAFQISQSFEALGSTINVRCAVIVGGMDMVSQSIALGKKP 172
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 173 HIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRL 208
>sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rrp3
PE=3 SV=1
Length = 472
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+T+G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E+P F L+L PTRELA+QI F LG +N+R ++I GGMDMV Q L KKP
Sbjct: 112 QALMENPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRL 207
>sp|A4RGD1|RRP3_MAGO7 ATP-dependent rRNA helicase RRP3 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=RRP3 PE=3 SV=1
Length = 538
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 106/160 (66%)
Query: 2 EDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFA 61
E P KSF DL + L C+ + K PT IQ+ IP L D IG A+TGSGKT AFA
Sbjct: 106 ETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFA 165
Query: 62 LPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKEL 121
LPILQ E P +F LVL PTRELA QIG F LG ++LR +++ GG+DMV Q L
Sbjct: 166 LPILQSLLEKPQPLFGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSTAL 225
Query: 122 AKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KKPHIV+ATPGRL DHL+ FSL +KFLV+DEADRL
Sbjct: 226 GKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRL 265
>sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain
B05.10) GN=rrp3 PE=3 SV=1
Length = 486
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 106/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 60 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 119
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI QF LG V+ ++ ++I GGMDMV Q L KKP
Sbjct: 120 QALLDKPQPLFGLVLAPTRELAYQISQQFEALGSVIRVKCAVIVGGMDMVPQSIALGKKP 179
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 180 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 215
>sp|A1D6X9|DBP8_NEOFI ATP-dependent RNA helicase dbp8 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp8
PE=3 SV=1
Length = 526
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ + SF L + PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AF
Sbjct: 91 LREEASSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAF 150
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP+GIF +VLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 151 SVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRPQAIA 210
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA +PH+VIATPGRLADH+ + + L R++ +VLDEADRL
Sbjct: 211 LAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRL 254
>sp|Q4WXW1|DBP8_ASPFU ATP-dependent RNA helicase dbp8 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp8
PE=3 SV=1
Length = 526
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
+ + SF L + PWL+ T+ V+ PT IQKA IP +L DCIG ++TGSGKT+AF
Sbjct: 91 LREEASSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAF 150
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
++P+LQKW EDP+GIF +VLTPTRELA QI +Q + +++ +ITGG DM Q
Sbjct: 151 SVPMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRPQAIA 210
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
LA +PH+VIATPGRLADH+ + + L R++ +VLDEADRL
Sbjct: 211 LAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRL 254
>sp|Q7RYZ7|DBP8_NEUCR ATP-dependent RNA helicase dbp-8 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-8 PE=3 SV=1
Length = 626
Score = 180 bits (457), Expect = 4e-45, Method: Composition-based stats.
Identities = 85/162 (52%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 3 DPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFAL 62
D +F L + PWL++ + +K PT IQK IP +L DCIG ++TGSGKT+AFA+
Sbjct: 192 DANTTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 251
Query: 63 PILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELA 122
PILQ+W +P IF ++LTPTRELA QI +Q + L + L+ +ITGG DM Q +LA
Sbjct: 252 PILQQWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRKQAIDLA 311
Query: 123 KKPHIVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
K+PH+VIATPGRLADH+ T + L R+KF+VLDEADRL
Sbjct: 312 KRPHLVIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADRL 353
>sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3
PE=3 SV=1
Length = 472
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 104/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+T+G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F L+L PTRELA+QI F LG +N+R ++I GGMDMV Q L KKP
Sbjct: 112 QALMEKPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRL 207
>sp|Q6FQZ0|DBP8_CANGA ATP-dependent RNA helicase DBP8 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP8 PE=3 SV=1
Length = 437
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 110/159 (69%), Gaps = 7/159 (4%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
++F L L+ WL+ + ++TPT IQ IP +L DCIG AKTGSGKT+AFA P+L
Sbjct: 9 QNFRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPML 68
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
+W EDP G+F +VLTPTRELA QI +QF LG MN+RV+++ GG +VDQ +L +KP
Sbjct: 69 TQWSEDPTGMFGIVLTPTRELAMQIAEQFTALGSYMNIRVALVVGGESIVDQALQLQRKP 128
Query: 126 HIVIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
H +IATPGRLA H+ DT L R+K+LVLDEAD
Sbjct: 129 HFIIATPGRLAHHILNSGDDTVG--GLKRVKYLVLDEAD 165
>sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1
Length = 467
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 48 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPIL 107
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E P F LVL PTRELAYQI F LG M +R +I GGMDMV Q L KKP
Sbjct: 108 QALMEKPQPFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSISLGKKP 167
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 168 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 203
>sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1
Length = 482
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C T+G K PT IQ+ IP L D IG A+TGSGKT AFALPIL
Sbjct: 56 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 115
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P +F LVL PTRELAYQI F LG ++ ++ ++I GGMDMV Q L KKP
Sbjct: 116 QSLLDKPQPLFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAIALGKKP 175
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 176 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 211
>sp|P38719|DBP8_YEAST ATP-dependent RNA helicase DBP8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP8 PE=1 SV=1
Length = 431
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS+I GG +V Q +L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG--GLMRAKYLVLDEAD 158
>sp|A6ZT77|DBP8_YEAS7 ATP-dependent RNA helicase DBP8 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP8 PE=3 SV=1
Length = 431
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L L+ WL + + + PT IQKA IP +L DCIG AKTGSGKT+AFA P+L K
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTK 63
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF LG MN+RVS+I GG +V Q +L +KPH
Sbjct: 64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHF 123
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R K+LVLDEAD
Sbjct: 124 IIATPGRLAHHIMSSGDDTVG--GLMRAKYLVLDEAD 158
>sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rrp3 PE=3 SV=1
Length = 465
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 103/158 (65%)
Query: 4 PIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALP 63
P KSF +L + L C+ +G K PT IQ IP L D IG A+TGSGKT AFALP
Sbjct: 44 PAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALP 103
Query: 64 ILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
+LQ E P +F LVL PTRELAYQI F LG + +R ++I GGMDMV Q L K
Sbjct: 104 MLQALMEAPQTLFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGK 163
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPHI++ATPGRL DHL+ FSL +K+L +DEADRL
Sbjct: 164 KPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRL 201
>sp|Q6CXW0|DBP8_KLULA ATP-dependent RNA helicase DBP8 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP8 PE=3 SV=1
Length = 435
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Query: 8 FTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQK 67
F L + WL+ + + PT IQKA IP +L DCIG A TGSGKT+AFA P+L K
Sbjct: 6 FKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPMLTK 65
Query: 68 WCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPHI 127
W EDP G+F +VLTPTRELA QI +QF G MN+RV+I+ GG +V Q EL K+PH
Sbjct: 66 WSEDPQGMFGIVLTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESIVQQAIELQKRPHF 125
Query: 128 VIATPGRLADHL-----DTCNTFSLNRIKFLVLDEAD 159
+IATPGRLA H+ DT L R+KFLVLDEAD
Sbjct: 126 IIATPGRLAHHVLNSGEDTIG--GLKRVKFLVLDEAD 160
>sp|P0CR02|DBP8_CRYNJ ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP8 PE=3 SV=1
Length = 619
Score = 177 bits (448), Expect = 4e-44, Method: Composition-based stats.
Identities = 87/170 (51%), Positives = 118/170 (69%), Gaps = 5/170 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ LI +I +K PTEIQ A + +L+ DCIG AKTGSGKT+AFALPI++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DP+G++A+VLTPTRELAYQ+ +QFLV+GK + L + I GGMDM+ Q +EL +PH
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 127 IVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
I++ATPGRL D L + L+R++ LVLDEADR+ S L + F
Sbjct: 273 IIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLF 322
>sp|P0CR03|DBP8_CRYNB ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP8 PE=3 SV=1
Length = 619
Score = 177 bits (448), Expect = 5e-44, Method: Composition-based stats.
Identities = 87/170 (51%), Positives = 118/170 (69%), Gaps = 5/170 (2%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
+F L L+ LI +I +K PTEIQ A + +L+ DCIG AKTGSGKT+AFALPI++
Sbjct: 153 TFESLGLSRPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
+ DP+G++A+VLTPTRELAYQ+ +QFLV+GK + L + I GGMDM+ Q +EL +PH
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 127 IVIATPGRLADHLDT--CNTFSLNRIKFLVLDEADRL---SLMTSLKFFF 171
I++ATPGRL D L + L+R++ LVLDEADR+ S L + F
Sbjct: 273 IIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLF 322
>sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRP3 PE=3
SV=1
Length = 486
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 109/161 (67%)
Query: 1 MEDPIKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAF 60
++ P K+F DL +N L C+ + K PT IQ+ IP L D IG A+TGSGKT AF
Sbjct: 55 VDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAF 114
Query: 61 ALPILQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKE 120
ALP+LQ + P +F LVL PTRELA QIG F LG +++LR ++I GG+DMV Q
Sbjct: 115 ALPVLQALLDKPQPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAIA 174
Query: 121 LAKKPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
L KKPHIV+ATPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 175 LGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRL 215
>sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRP3 PE=3 SV=2
Length = 477
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +LKL P L+ Q + PT IQ IPH L +D IG A+TGSGKT AFA+PIL
Sbjct: 65 KSFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 124
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q E + LVL PTRELAYQI + F LG M LR I GGMDM+DQ ++L +KP
Sbjct: 125 QALWEAQAAYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKP 184
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 185 HILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 220
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 176 bits (445), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 103/156 (66%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L L L C ++G K PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 52 KSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL 111
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVL PTRELAYQI F LG +++R +++ GGMDMV Q L KKP
Sbjct: 112 QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKP 171
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 172 HIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRL 207
>sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rrp3 PE=3 SV=1
Length = 465
Score = 176 bits (445), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L + L C+ +G KTPT IQ+ IP VLN D IG A+TGSGKT AFALP++
Sbjct: 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q+ +P FA+VL PTRELAYQI +QF +G + +R +I GGMDMV Q L+KKP
Sbjct: 106 QELWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKP 165
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
H+++ TPGRL DHL+ FSL +K+L++DEADRL
Sbjct: 166 HVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRL 201
>sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=RRP3 PE=3 SV=1
Length = 485
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 105/156 (67%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF DL + L C+ +G K+PT IQ IP L D IG A+TGSGKT AFALPIL
Sbjct: 59 KSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 118
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q P +F L+L PTRELA QI + F LG ++++R ++I GGMDMV Q L KKP
Sbjct: 119 QALMNKPQSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKP 178
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ FSL +K+LV+DEADRL
Sbjct: 179 HIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRL 214
>sp|A7TK63|DBP8_VANPO ATP-dependent RNA helicase DBP8 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP8 PE=3 SV=1
Length = 431
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 3/158 (1%)
Query: 5 IKSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPI 64
++ F L L+ WL+ + + PT IQK IP +L DCIG AKTGSGKT+AFA P+
Sbjct: 1 MQDFKSLGLSRWLVESLNAMRITHPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAFAGPM 60
Query: 65 LQKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKK 124
L +W +DP G+F +VLTPTRELA QI +QF LG MN+RV ++ GG +V Q EL KK
Sbjct: 61 LSQWSDDPSGMFGVVLTPTRELAIQIAEQFTALGSSMNIRVCLVVGGESIVKQALELQKK 120
Query: 125 PHIVIATPGRLADHLDTCN---TFSLNRIKFLVLDEAD 159
PH +IATPGRLA H+ + L+R+K+LVLDEAD
Sbjct: 121 PHFIIATPGRLAHHILSSGEEVVGGLSRVKYLVLDEAD 158
>sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=RRP3 PE=3 SV=2
Length = 539
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 4/158 (2%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
K+F +L L P L+ +++ PT IQ IPH L +D IG A+TGSGKT AFA+PIL
Sbjct: 123 KTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 182
Query: 66 QK-W-CEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAK 123
Q W + PY FALVL PTREL +QI D F LG M LR S I GGMDM+DQ ++L +
Sbjct: 183 QSLWHAQQPY--FALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMR 240
Query: 124 KPHIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
KPH+++ATPGR+ DHL+ FSL +K+LV+DEADRL
Sbjct: 241 KPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRL 278
>sp|Q0U8V9|DBP8_PHANO ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP8 PE=3 SV=1
Length = 508
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 3/158 (1%)
Query: 7 SFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPILQ 66
SF + + PWL+ ++ +K PT IQKA IP +L DCIG ++TG+GKT+AF++PILQ
Sbjct: 78 SFASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQ 137
Query: 67 KWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKPH 126
KW EDP GIF L++TPTRELA QI +Q + +++ ++TGG D +Q LA +PH
Sbjct: 138 KWAEDPSGIFGLIITPTRELAIQIYEQVKAISAPQSMKPILVTGGSDQREQAIALASRPH 197
Query: 127 IVIATPGRLADHLDTCNTFS---LNRIKFLVLDEADRL 161
+VIATPGRLA+H+ T + L R++F+V DEADRL
Sbjct: 198 VVIATPGRLAEHIKTSGEDTICGLRRVRFVVFDEADRL 235
>sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis
elegans GN=T26G10.1 PE=3 SV=1
Length = 489
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 109/156 (69%)
Query: 6 KSFTDLKLNPWLIRQCQTIGVKTPTEIQKAIIPHVLNDEDCIGCAKTGSGKTLAFALPIL 65
KSF +L ++ L CQ +G P++IQ+A +PH L +D IG A+TGSGKT AFA+P+L
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 66 QKWCEDPYGIFALVLTPTRELAYQIGDQFLVLGKVMNLRVSIITGGMDMVDQGKELAKKP 125
Q + P F LVLTPTRELA+QIG QF LG + L ++I GG+DM Q LA++P
Sbjct: 104 QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRP 163
Query: 126 HIVIATPGRLADHLDTCNTFSLNRIKFLVLDEADRL 161
HI++ATPGRL DHL+ F+L +KFL++DEADR+
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRI 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.143 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,499,471
Number of Sequences: 539616
Number of extensions: 2758423
Number of successful extensions: 11817
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 8288
Number of HSP's gapped (non-prelim): 1356
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)