Your job contains 1 sequence.
>psy4278
MKPPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHS
NHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKC
LINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVD
FANKSHHLEIEDRRKTG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4278
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023216 - symbol:Parg "Poly(ADP-ribose) glycohydro... 410 1.7e-37 1
UNIPROTKB|F1NKA8 - symbol:PARG "Uncharacterized protein" ... 394 1.4e-35 1
UNIPROTKB|F1NY76 - symbol:PARG "Uncharacterized protein" ... 394 1.4e-35 1
MGI|MGI:1347094 - symbol:Parg "poly (ADP-ribose) glycohyd... 394 1.7e-35 1
UNIPROTKB|F1SDW4 - symbol:PARG "Uncharacterized protein" ... 391 2.6e-35 1
RGD|620387 - symbol:Parg "poly (ADP-ribose) glycohydrolas... 392 2.8e-35 1
UNIPROTKB|Q9QYM2 - symbol:Parg "Poly(ADP-ribose) glycohyd... 392 2.8e-35 1
UNIPROTKB|J9NTQ1 - symbol:PARG "Uncharacterized protein" ... 391 3.0e-35 1
UNIPROTKB|E2REC3 - symbol:PARG "Uncharacterized protein" ... 391 3.6e-35 1
UNIPROTKB|Q86W56 - symbol:PARG "Poly(ADP-ribose) glycohyd... 391 3.6e-35 1
UNIPROTKB|F1MG95 - symbol:PARG "Poly(ADP-ribose) glycohyd... 390 4.7e-35 1
UNIPROTKB|O02776 - symbol:PARG "Poly(ADP-ribose) glycohyd... 390 4.7e-35 1
ZFIN|ZDB-GENE-090313-286 - symbol:pargl "poly (ADP-ribose... 353 1.1e-31 1
DICTYBASE|DDB_G0277943 - symbol:parG "poly (ADP-ribose) g... 334 1.8e-29 1
TAIR|locus:2045243 - symbol:TEJ "Sanskrit for 'bright'" s... 180 5.7e-13 1
WB|WBGene00004052 - symbol:pme-4 species:6239 "Caenorhabd... 120 3.0e-05 1
WB|WBGene00004051 - symbol:pme-3 species:6239 "Caenorhabd... 120 5.8e-05 1
UNIPROTKB|Q867X0 - symbol:pme-3 "Poly(ADP-ribose) glycohy... 120 5.8e-05 1
>FB|FBgn0023216 [details] [associations]
symbol:Parg "Poly(ADP-ribose) glycohydrolase" species:7227
"Drosophila melanogaster" [GO:0004649 "poly(ADP-ribose)
glycohydrolase activity" evidence=ISS;IMP;NAS] [GO:0005975
"carbohydrate metabolic process" evidence=IMP] [GO:0035065
"regulation of histone acetylation" evidence=IMP] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0043484 "regulation of RNA splicing" evidence=IMP] [GO:0030576
"Cajal body organization" evidence=IMP] [GO:0036099 "female
germ-line stem cell maintenance" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR007724 Pfam:PF05028
GO:GO:0005654 GO:GO:0006911 GO:GO:0005975 EMBL:AE014298
GO:GO:0009408 GO:GO:0006342 GO:GO:0043484 GO:GO:0051457
GO:GO:0004649 GO:GO:0035065 eggNOG:NOG324088 KO:K07759
PANTHER:PTHR12837 CTD:8505 EMBL:AF079556 EMBL:Z98254 EMBL:AY051955
RefSeq:NP_001245511.1 RefSeq:NP_477321.2 UniGene:Dm.2967
ProteinModelPortal:O46043 IntAct:O46043 MINT:MINT-922975
STRING:O46043 PaxDb:O46043 GeneID:31329 KEGG:dme:Dmel_CG2864
FlyBase:FBgn0023216 InParanoid:O46043 OrthoDB:EOG46Q57M
PhylomeDB:O46043 GenomeRNAi:31329 NextBio:773078 Bgee:O46043
GermOnline:CG2864 GO:GO:0036099 Uniprot:O46043
Length = 768
Score = 410 (149.4 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 91/168 (54%), Positives = 120/168 (71%)
Query: 27 TDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRR 86
T +FF+ LLP+II LALRLP+++Q +PLLK H N S++LSQ QI+ LLANAFLCT+PRR
Sbjct: 205 TRVFFEDLLPRIIRLALRLPDLIQSPVPLLKHHKNASLSLSQQQISCLLANAFLCTFPRR 264
Query: 87 NSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRV--TTKD----PTGLVTYS 140
N+ + +S+Y+ FP INF+RL+Q+ V EKLKC+++YF RV T +D PTG+VT+
Sbjct: 265 NTLKRKSEYSTFPDINFNRLYQSTGPAVLEKLKCIMHYFRRVCPTERDASNVPTGVVTFV 324
Query: 141 RRY-LPHSQLPHWGDSRRKLPD--LFISSEGMIENQR-GLLQVDFANK 184
RR LP L W S L D L + +EG IE++ GLLQVDFANK
Sbjct: 325 RRSGLPE-HLIDWSQSAAPLGDVPLHVDAEGTIEDEGIGLLQVDFANK 371
>UNIPROTKB|F1NKA8 [details] [associations]
symbol:PARG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004649 "poly(ADP-ribose) glycohydrolase activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] InterPro:IPR007724 Pfam:PF05028 GO:GO:0005975
GO:GO:0004649 PANTHER:PTHR12837 GeneTree:ENSGT00390000003652
EMBL:AADN02043529 EMBL:AADN02043528 IPI:IPI00820960
Ensembl:ENSGALT00000041190 ArrayExpress:F1NKA8 Uniprot:F1NKA8
Length = 896
Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 83/155 (53%), Positives = 110/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
F+ +LP ++ LAL LP + IPLLK NHSIT+SQ QIAS LANAF CT+PRRN+
Sbjct: 507 FQSILPDMVKLALCLPTICTQPIPLLKQKMNHSITMSQEQIASFLANAFFCTFPRRNAKM 566
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +S EKLK L YF RVT K PTGLVT++R+ L + P
Sbjct: 567 -KSEYSSYPDINFNRLFEGRSPRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQCL--QEFP 623
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W S++KL L ++ EG IE N +G+LQVDFAN+
Sbjct: 624 DWERSQKKLSRLHVTYEGTIESNGQGMLQVDFANR 658
>UNIPROTKB|F1NY76 [details] [associations]
symbol:PARG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0004649 "poly(ADP-ribose) glycohydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] InterPro:IPR007724 Pfam:PF05028 GO:GO:0005829
GO:GO:0005634 GO:GO:0005975 GO:GO:0006974 GO:GO:0004649
PANTHER:PTHR12837 GeneTree:ENSGT00390000003652 OMA:KRKEQCE
EMBL:AADN02043529 EMBL:AADN02043528 IPI:IPI00597232
Ensembl:ENSGALT00000003306 ArrayExpress:F1NY76 Uniprot:F1NY76
Length = 904
Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 83/155 (53%), Positives = 110/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
F+ +LP ++ LAL LP + IPLLK NHSIT+SQ QIAS LANAF CT+PRRN+
Sbjct: 515 FQSILPDMVKLALCLPTICTQPIPLLKQKMNHSITMSQEQIASFLANAFFCTFPRRNAKM 574
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +S EKLK L YF RVT K PTGLVT++R+ L + P
Sbjct: 575 -KSEYSSYPDINFNRLFEGRSPRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQCL--QEFP 631
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W S++KL L ++ EG IE N +G+LQVDFAN+
Sbjct: 632 DWERSQKKLSRLHVTYEGTIESNGQGMLQVDFANR 666
>MGI|MGI:1347094 [details] [associations]
symbol:Parg "poly (ADP-ribose) glycohydrolase" species:10090
"Mus musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004649 "poly(ADP-ribose)
glycohydrolase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IMP] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008152
"metabolic process" evidence=IMP] [GO:0016045 "detection of
bacterium" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0045739 "positive regulation of DNA
repair" evidence=ISO] InterPro:IPR007724 Pfam:PF05028
MGI:MGI:1347094 GO:GO:0005829 GO:GO:0005634 GO:GO:0016045
GO:GO:0005975 GO:GO:0006974 GO:GO:0004649 eggNOG:NOG324088
PANTHER:PTHR12837 HOGENOM:HOG000168457 HOVERGEN:HBG053510
OrthoDB:EOG4KPT9V EMBL:AF079557 EMBL:AK036656 EMBL:BC050892
EMBL:BC059827 IPI:IPI00471055 IPI:IPI00471056 UniGene:Mm.15962
PDB:4FC2 PDBsum:4FC2 ProteinModelPortal:O88622 SMR:O88622
STRING:O88622 PhosphoSite:O88622 PaxDb:O88622 PRIDE:O88622
Ensembl:ENSMUST00000163350 UCSC:uc007syp.1 UCSC:uc007syr.1
GeneTree:ENSGT00390000003652 InParanoid:O88622 Bgee:O88622
CleanEx:MM_PARG Genevestigator:O88622 GermOnline:ENSMUSG00000021911
Uniprot:O88622
Length = 969
Score = 394 (143.8 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHS+T+SQ QIASLLANAF CT+PRRN+
Sbjct: 583 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNAKM 642
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 643 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 699
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N RG+LQVDFAN+
Sbjct: 700 EWERCEKPLTRLHVTYEGTIEGNGRGMLQVDFANR 734
>UNIPROTKB|F1SDW4 [details] [associations]
symbol:PARG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016045 "detection of bacterium" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004649 "poly(ADP-ribose) glycohydrolase
activity" evidence=IEA] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA] InterPro:IPR007724 Pfam:PF05028
GO:GO:0005829 GO:GO:0005634 GO:GO:0016045 GO:GO:0005975
GO:GO:0006974 GO:GO:0004649 PANTHER:PTHR12837
GeneTree:ENSGT00390000003652 OMA:KRKEQCE EMBL:CU607060
Ensembl:ENSSSCT00000011380 Uniprot:F1SDW4
Length = 848
Score = 391 (142.7 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHSIT+SQ QIASLLANAF CT+PRRN+
Sbjct: 590 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 649
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 650 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 706
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N +G+LQVDFAN+
Sbjct: 707 EWERCEKPLTRLHVTYEGTIEGNGQGMLQVDFANR 741
>RGD|620387 [details] [associations]
symbol:Parg "poly (ADP-ribose) glycohydrolase" species:10116
"Rattus norvegicus" [GO:0000785 "chromatin" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004649
"poly(ADP-ribose) glycohydrolase activity" evidence=IEA;ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISO] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0016045 "detection of bacterium" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO;IDA]
[GO:0045739 "positive regulation of DNA repair" evidence=IMP]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR007724
Pfam:PF05028 RGD:620387 GO:GO:0005829 GO:GO:0005634 GO:GO:0016045
GO:GO:0005975 GO:GO:0000785 GO:GO:0003682 GO:GO:0006974
GO:GO:0045739 GO:GO:0004649 eggNOG:NOG324088 KO:K07759
PANTHER:PTHR12837 CTD:8505 HOGENOM:HOG000168457 HOVERGEN:HBG053510
OrthoDB:EOG4KPT9V EMBL:AB019366 IPI:IPI00214269 RefSeq:NP_112629.1
UniGene:Rn.13634 PDB:3UEK PDB:3UEL PDBsum:3UEK PDBsum:3UEL
ProteinModelPortal:Q9QYM2 STRING:Q9QYM2 PhosphoSite:Q9QYM2
PRIDE:Q9QYM2 GeneID:83507 KEGG:rno:83507 UCSC:RGD:620387
InParanoid:Q9QYM2 NextBio:615942 Genevestigator:Q9QYM2
GermOnline:ENSRNOG00000019978 Uniprot:Q9QYM2
Length = 972
Score = 392 (143.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHS+T+SQ QIASLLANAF CT+PRRN+
Sbjct: 586 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNAKM 645
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 646 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 702
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N RG+LQVDFAN+
Sbjct: 703 EWERCDKPLTRLHVTYEGTIEGNGRGMLQVDFANR 737
>UNIPROTKB|Q9QYM2 [details] [associations]
symbol:Parg "Poly(ADP-ribose) glycohydrolase" species:10116
"Rattus norvegicus" [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] InterPro:IPR007724 Pfam:PF05028 RGD:620387
GO:GO:0005829 GO:GO:0005634 GO:GO:0016045 GO:GO:0005975
GO:GO:0000785 GO:GO:0003682 GO:GO:0006974 GO:GO:0045739
GO:GO:0004649 eggNOG:NOG324088 KO:K07759 PANTHER:PTHR12837 CTD:8505
HOGENOM:HOG000168457 HOVERGEN:HBG053510 OrthoDB:EOG4KPT9V
EMBL:AB019366 IPI:IPI00214269 RefSeq:NP_112629.1 UniGene:Rn.13634
PDB:3UEK PDB:3UEL PDBsum:3UEK PDBsum:3UEL ProteinModelPortal:Q9QYM2
STRING:Q9QYM2 PhosphoSite:Q9QYM2 PRIDE:Q9QYM2 GeneID:83507
KEGG:rno:83507 UCSC:RGD:620387 InParanoid:Q9QYM2 NextBio:615942
Genevestigator:Q9QYM2 GermOnline:ENSRNOG00000019978 Uniprot:Q9QYM2
Length = 972
Score = 392 (143.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHS+T+SQ QIASLLANAF CT+PRRN+
Sbjct: 586 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNAKM 645
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 646 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 702
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N RG+LQVDFAN+
Sbjct: 703 EWERCDKPLTRLHVTYEGTIEGNGRGMLQVDFANR 737
>UNIPROTKB|J9NTQ1 [details] [associations]
symbol:PARG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004649 "poly(ADP-ribose) glycohydrolase
activity" evidence=IEA] InterPro:IPR007724 Pfam:PF05028
GO:GO:0005975 GO:GO:0004649 PANTHER:PTHR12837
GeneTree:ENSGT00390000003652 EMBL:AAEX03015370
Ensembl:ENSCAFT00000045852 Uniprot:J9NTQ1
Length = 893
Score = 391 (142.7 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHSIT+SQ QIASLLANAF CT+PRRN+
Sbjct: 507 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 566
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 567 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 623
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N +G+LQVDFAN+
Sbjct: 624 EWERCEKPLTRLHVTYEGTIEGNGQGMLQVDFANR 658
>UNIPROTKB|E2REC3 [details] [associations]
symbol:PARG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004649 "poly(ADP-ribose) glycohydrolase
activity" evidence=IEA] InterPro:IPR007724 Pfam:PF05028
GO:GO:0005975 GO:GO:0004649 KO:K07759 PANTHER:PTHR12837 CTD:8505
GeneTree:ENSGT00390000003652 EMBL:AAEX03015370 RefSeq:XP_534946.2
Ensembl:ENSCAFT00000010901 GeneID:477749 KEGG:cfa:477749
OMA:KRKEQCE Uniprot:E2REC3
Length = 976
Score = 391 (142.7 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHSIT+SQ QIASLLANAF CT+PRRN+
Sbjct: 590 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 649
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 650 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 706
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N +G+LQVDFAN+
Sbjct: 707 EWERCEKPLTRLHVTYEGTIEGNGQGMLQVDFANR 741
>UNIPROTKB|Q86W56 [details] [associations]
symbol:PARG "Poly(ADP-ribose) glycohydrolase" species:9606
"Homo sapiens" [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0004649 "poly(ADP-ribose) glycohydrolase
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR007724 Pfam:PF05028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0016045
GO:GO:0005759 GO:GO:0005975 GO:GO:0000785 GO:GO:0003682
GO:GO:0006974 GO:GO:0045739 GO:GO:0004649 UniGene:Hs.10136
KO:K07759 PANTHER:PTHR12837 CTD:8505 HOVERGEN:HBG053510
EMBL:AY258587 EMBL:AY575848 EMBL:AY575849 EMBL:AF005043
EMBL:EF382674 EMBL:JQ890226 EMBL:AK295786 EMBL:AK302560
EMBL:AK314909 EMBL:BC050560 EMBL:BC052966 IPI:IPI00470744
IPI:IPI00759749 IPI:IPI00787604 RefSeq:NP_003622.2
UniGene:Hs.535298 UniGene:Hs.732225 PDB:4A0D PDB:4B1G PDB:4B1H
PDB:4B1I PDB:4B1J PDBsum:4A0D PDBsum:4B1G PDBsum:4B1H PDBsum:4B1I
PDBsum:4B1J ProteinModelPortal:Q86W56 SMR:Q86W56 STRING:Q86W56
PhosphoSite:Q86W56 DMDM:56417893 PaxDb:Q86W56 PRIDE:Q86W56
Ensembl:ENST00000402038 GeneID:8505 KEGG:hsa:8505 UCSC:uc001jif.3
UCSC:uc010qgx.2 GeneCards:GC10M051026 H-InvDB:HIX0127080
HGNC:HGNC:8605 HPA:HPA021819 MIM:603501 neXtProt:NX_Q86W56
PharmGKB:PA32940 eggNOG:NOG254589 InParanoid:Q86W56
BindingDB:Q86W56 ChEMBL:CHEMBL1795143 ChiTaRS:PARG GenomeRNAi:8505
NextBio:31829 PMAP-CutDB:Q86W56 ArrayExpress:Q86W56 Bgee:Q86W56
CleanEx:HS_PARG Genevestigator:Q86W56 GermOnline:ENSG00000204155
Uniprot:Q86W56
Length = 976
Score = 391 (142.7 bits), Expect = 3.6e-35, P = 3.6e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHSIT+SQ QIASLLANAF CT+PRRN+
Sbjct: 590 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 649
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 650 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 706
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N +G+LQVDFAN+
Sbjct: 707 EWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANR 741
>UNIPROTKB|F1MG95 [details] [associations]
symbol:PARG "Poly(ADP-ribose) glycohydrolase" species:9913
"Bos taurus" [GO:0016045 "detection of bacterium" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004649 "poly(ADP-ribose) glycohydrolase
activity" evidence=IEA] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA] InterPro:IPR007724 Pfam:PF05028
GO:GO:0005829 GO:GO:0005634 GO:GO:0016045 GO:GO:0005975
GO:GO:0006974 GO:GO:0004649 PANTHER:PTHR12837 IPI:IPI00700481
UniGene:Bt.106829 GeneTree:ENSGT00390000003652 OMA:KRKEQCE
EMBL:DAAA02062236 Ensembl:ENSBTAT00000031269 Uniprot:F1MG95
Length = 977
Score = 390 (142.3 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHSIT+SQ QIASLLANAF CT+PRRN+
Sbjct: 591 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 650
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 651 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 707
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N +G+LQVDFAN+
Sbjct: 708 EWERCEKLLTRLHVTYEGTIEGNGQGMLQVDFANR 742
>UNIPROTKB|O02776 [details] [associations]
symbol:PARG "Poly(ADP-ribose) glycohydrolase" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004649
"poly(ADP-ribose) glycohydrolase activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
InterPro:IPR007724 Pfam:PF05028 GO:GO:0005634 GO:GO:0005975
GO:GO:0004649 BRENDA:3.2.1.143 eggNOG:NOG324088 KO:K07759
PANTHER:PTHR12837 EMBL:U78975 IPI:IPI00700481 RefSeq:NP_776563.1
UniGene:Bt.106829 STRING:O02776 PRIDE:O02776 GeneID:281377
KEGG:bta:281377 CTD:8505 HOGENOM:HOG000168457 HOVERGEN:HBG053510
InParanoid:O02776 OrthoDB:EOG4KPT9V BindingDB:O02776
ChEMBL:CHEMBL4279 NextBio:20805381 Uniprot:O02776
Length = 977
Score = 390 (142.3 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 82/155 (52%), Positives = 109/155 (70%)
Query: 31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
++ +LP ++ +AL LPN+ IPLLK NHSIT+SQ QIASLLANAF CT+PRRN+
Sbjct: 591 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 650
Query: 91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
+S+Y+++P INF+RLF+ +SS EKLK L YF RVT K PTGLVT++R+ L P
Sbjct: 651 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 707
Query: 151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
W + L L ++ EG IE N +G+LQVDFAN+
Sbjct: 708 EWERCEKLLTRLHVTYEGTIEGNGQGMLQVDFANR 742
>ZFIN|ZDB-GENE-090313-286 [details] [associations]
symbol:pargl "poly (ADP-ribose) glycohydrolase,
like" species:7955 "Danio rerio" [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0004649 "poly(ADP-ribose)
glycohydrolase activity" evidence=IEA] InterPro:IPR007724
Pfam:PF05028 ZFIN:ZDB-GENE-090313-286 GO:GO:0005975 GO:GO:0004649
PANTHER:PTHR12837 GeneTree:ENSGT00390000003652 EMBL:CT956056
IPI:IPI00862122 RefSeq:XP_001338257.2 UniGene:Dr.160262
UniGene:Dr.87163 Ensembl:ENSDART00000098953 GeneID:797792
KEGG:dre:797792 CTD:797792 NextBio:20933152 Uniprot:E7F338
Length = 609
Score = 353 (129.3 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 76/163 (46%), Positives = 109/163 (66%)
Query: 34 LLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPES 93
++PK+ LA LP+++Q IPLL+ + N +ITLSQ QI+ LLANAF CT+P RN P S
Sbjct: 230 VIPKMAKLATELPSLIQRSIPLLRHNQNQAITLSQQQISCLLANAFFCTFPHRNDTSPGS 289
Query: 94 QYANFPCINFSRLFQAQS-----SCVSEKLKCLINYFVRVTT--KDPT----GLVTYSRR 142
+YA++P INFS LF ++ S +EKL+ + +YF VT+ KDP GLVT+ R
Sbjct: 290 EYASYPTINFSSLFGGRNDPSKLSGKAEKLRAIFHYFDTVTSEEKDPACKADGLVTFERV 349
Query: 143 YLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
+P S+LP W ++ L +L +S++G IE + G+LQVDFA+K
Sbjct: 350 SVPASELPKWKSEKKLLKNLHVSADGSIEKEGTGMLQVDFASK 392
>DICTYBASE|DDB_G0277943 [details] [associations]
symbol:parG "poly (ADP-ribose) glycohydrolase"
species:44689 "Dictyostelium discoideum" [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0004649 "poly(ADP-ribose)
glycohydrolase activity" evidence=IEA;ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR007724 Pfam:PF05028
dictyBase:DDB_G0277943 GenomeReviews:CM000152_GR GO:GO:0005975
EMBL:AAFI02000023 GO:GO:0004649 eggNOG:NOG324088 KO:K07759
PANTHER:PTHR12837 RefSeq:XP_642024.1 EnsemblProtists:DDB0232409
GeneID:8621235 KEGG:ddi:DDB_G0277943 InParanoid:Q54Z28 OMA:NYPEINF
Uniprot:Q54Z28
Length = 658
Score = 334 (122.6 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 80/173 (46%), Positives = 103/173 (59%)
Query: 27 TDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRR 86
T+ FF Q LPKII LAL+LP + IPLLK+ + I LSQ Q++SLLANAFLCT+PR+
Sbjct: 269 TNEFFSQTLPKIIKLALQLPFLCARPIPLLKSSVDREIILSQKQVSSLLANAFLCTFPRQ 328
Query: 87 ------NSNQPESQYAN------FPCINFSRLFQAQS-SCVSEKLKCLINYFVRVTTKDP 133
N+N + Y FP INF LF + + KLKC+ +YF VT K P
Sbjct: 329 GNITSNNNNNNNNHYRRGGNQDKFPSINFHSLFSGKMIPSRAAKLKCIFHYFKCVTEKTP 388
Query: 134 TGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANKS 185
TG +++ R+ S++P W S L DL +EG IE N G+LQ DFANKS
Sbjct: 389 TGTISFHRQVFDESEIPDWERSTATLRDLTCFTEGTIEDNGIGMLQADFANKS 441
>TAIR|locus:2045243 [details] [associations]
symbol:TEJ "Sanskrit for 'bright'" species:3702
"Arabidopsis thaliana" [GO:0004649 "poly(ADP-ribose) glycohydrolase
activity" evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0006970
"response to osmotic stress" evidence=IMP] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0009414 "response to water
deprivation" evidence=IMP] [GO:0090332 "stomatal closure"
evidence=IMP] InterPro:IPR007724 Pfam:PF05028 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006979 GO:GO:0050832 GO:GO:0005975
GO:GO:0009414 GO:GO:0048511 GO:GO:0006970 GO:GO:0004649
EMBL:AC006533 GO:GO:0090332 EMBL:AF394690 EMBL:AK222165
IPI:IPI00548019 PIR:B84726 RefSeq:NP_565730.1 UniGene:At.26160
ProteinModelPortal:Q9SKB3 SMR:Q9SKB3 PRIDE:Q9SKB3
EnsemblPlants:AT2G31870.1 GeneID:817745 KEGG:ath:AT2G31870
TAIR:At2g31870 eggNOG:NOG324088 HOGENOM:HOG000240549
InParanoid:Q9SKB3 KO:K07759 OMA:YASSFRF PhylomeDB:Q9SKB3
ProtClustDB:CLSN2688609 ArrayExpress:Q9SKB3 Genevestigator:Q9SKB3
PANTHER:PTHR12837 Uniprot:Q9SKB3
Length = 548
Score = 180 (68.4 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 30 FFKQLLPKIISLALRLPNVLQC--------------GIPLLKAHSNHSITLSQLQIASLL 75
+F +++P + SL L+ P++L+ G+ LL + + LSQ I +LL
Sbjct: 91 WFDEIIPALASLLLQFPSLLEVHFQNADNIVSGIKTGLRLLNSQQAGIVFLSQELIGALL 150
Query: 76 ANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTG 135
A +F C +P N NF + F+ L+ + S K++C+++YF R + P G
Sbjct: 151 ACSFFCLFPDDNRGAKHLPVINFDHL-FASLYISYSQSQESKIRCIMHYFERFCSCVPIG 209
Query: 136 LVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQR-GLLQVDFANK 184
+V++ R+ W S L + S G+IE+Q L+VDFANK
Sbjct: 210 IVSFERKITAAPDADFWSKSDVSLCAFKVHSFGLIEDQPDNALEVDFANK 259
>WB|WBGene00004052 [details] [associations]
symbol:pme-4 species:6239 "Caenorhabditis elegans"
[GO:0004649 "poly(ADP-ribose) glycohydrolase activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] InterPro:IPR007724 Pfam:PF05028 GO:GO:0005975
GO:GO:0004649 BRENDA:3.2.1.143 eggNOG:NOG324088 KO:K07759
PANTHER:PTHR12837 GeneTree:ENSGT00390000003652 HOGENOM:HOG000280700
EMBL:AF548468 EMBL:FO081083 RefSeq:NP_501496.2 UniGene:Cel.12729
ProteinModelPortal:Q9N5L4 SMR:Q9N5L4 EnsemblMetazoa:H23L24.5
GeneID:186765 KEGG:cel:CELE_H23L24.5 UCSC:H23L24.5 CTD:186765
WormBase:H23L24.5 InParanoid:Q9N5L4 OMA:CTQIDFA NextBio:932914
Uniprot:Q9N5L4
Length = 485
Score = 120 (47.3 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 40/125 (32%), Positives = 61/125 (48%)
Query: 63 SITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVS-EKLKCL 121
S T S +Q ASL+A F PR ++F + Q +++CV+ EKLK L
Sbjct: 149 SATFSHIQCASLIAWMFFSDTPR---------------LSFIIILQ-KTTCVAVEKLKFL 192
Query: 122 INYFVRVTTKDPTGLVTYSRRYLPHSQ-LPHWG-DSRRKLPDLFISSEGMIENQRGLLQV 179
YF +++ P G V++ + + H Q L +W LPD+ + + IE Q+
Sbjct: 193 FTYFDKMSIDPPIGAVSFRKMRITHKQYLENWKLRETNLLPDVQVFDKMSIEETALCTQI 252
Query: 180 DFANK 184
DFANK
Sbjct: 253 DFANK 257
>WB|WBGene00004051 [details] [associations]
symbol:pme-3 species:6239 "Caenorhabditis elegans"
[GO:0004649 "poly(ADP-ribose) glycohydrolase activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0007126 "meiosis" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR007724
Pfam:PF05028 GO:GO:0005975 GO:GO:0045132 GO:GO:0004649
BRENDA:3.2.1.143 eggNOG:NOG324088 PANTHER:PTHR12837
GeneTree:ENSGT00390000003652 EMBL:AY185493 EMBL:AY185494
EMBL:Z68161 PIR:T21138 RefSeq:NP_001023135.1 RefSeq:NP_001023136.1
UniGene:Cel.6484 ProteinModelPortal:Q867X0 SMR:Q867X0 PaxDb:Q867X0
PRIDE:Q867X0 EnsemblMetazoa:F20C5.1a GeneID:177683
KEGG:cel:CELE_F20C5.1 UCSC:F20C5.1a CTD:177683 WormBase:F20C5.1a
WormBase:F20C5.1b HOGENOM:HOG000280700 InParanoid:Q867X0
NextBio:897916 ArrayExpress:Q867X0 Uniprot:Q867X0
Length = 781
Score = 120 (47.3 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 40/128 (31%), Positives = 60/128 (46%)
Query: 63 SITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLI 122
S TLS Q A+L+A F +P+S ++ F R+ + S EKLK L
Sbjct: 431 SATLSHKQCAALVARMFFA--------RPDSPFS------FCRILSSDKSICVEKLKFLF 476
Query: 123 NYFVRVTTKDPTGLVTYSRRYLPHSQL-PHWGDSR-RKLPDLFISSEGMIENQRGLLQVD 180
YF +++ P G V++ + W D + R LP++ E +IE+ QVD
Sbjct: 477 TYFDKMSMDPPDGAVSFRLTKMDKDTFNEEWKDKKLRSLPEVEFFDEMLIEDTALCTQVD 536
Query: 181 FANKSHHL 188
FAN+ HL
Sbjct: 537 FANE--HL 542
>UNIPROTKB|Q867X0 [details] [associations]
symbol:pme-3 "Poly(ADP-ribose) glycohydrolase pme-3"
species:6239 "Caenorhabditis elegans" [GO:0005975 "carbohydrate
metabolic process" evidence=ISS] InterPro:IPR007724 Pfam:PF05028
GO:GO:0005975 GO:GO:0045132 GO:GO:0004649 BRENDA:3.2.1.143
eggNOG:NOG324088 PANTHER:PTHR12837 GeneTree:ENSGT00390000003652
EMBL:AY185493 EMBL:AY185494 EMBL:Z68161 PIR:T21138
RefSeq:NP_001023135.1 RefSeq:NP_001023136.1 UniGene:Cel.6484
ProteinModelPortal:Q867X0 SMR:Q867X0 PaxDb:Q867X0 PRIDE:Q867X0
EnsemblMetazoa:F20C5.1a GeneID:177683 KEGG:cel:CELE_F20C5.1
UCSC:F20C5.1a CTD:177683 WormBase:F20C5.1a WormBase:F20C5.1b
HOGENOM:HOG000280700 InParanoid:Q867X0 NextBio:897916
ArrayExpress:Q867X0 Uniprot:Q867X0
Length = 781
Score = 120 (47.3 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 40/128 (31%), Positives = 60/128 (46%)
Query: 63 SITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLI 122
S TLS Q A+L+A F +P+S ++ F R+ + S EKLK L
Sbjct: 431 SATLSHKQCAALVARMFFA--------RPDSPFS------FCRILSSDKSICVEKLKFLF 476
Query: 123 NYFVRVTTKDPTGLVTYSRRYLPHSQL-PHWGDSR-RKLPDLFISSEGMIENQRGLLQVD 180
YF +++ P G V++ + W D + R LP++ E +IE+ QVD
Sbjct: 477 TYFDKMSMDPPDGAVSFRLTKMDKDTFNEEWKDKKLRSLPEVEFFDEMLIEDTALCTQVD 536
Query: 181 FANKSHHL 188
FAN+ HL
Sbjct: 537 FANE--HL 542
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 185 0.00080 110 3 11 22 0.39 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 597 (63 KB)
Total size of DFA: 162 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 16.04u 0.09s 16.13t Elapsed: 00:00:05
Total cpu time: 16.05u 0.09s 16.14t Elapsed: 00:00:06
Start: Thu Aug 15 11:24:48 2013 End: Thu Aug 15 11:24:54 2013