Query psy4283
Match_columns 210
No_of_seqs 49 out of 51
Neff 4.0
Searched_HMMs 13730
Date Fri Aug 16 21:37:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4283.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/4283hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u6ea2 c.95.1.2 (A:175-317) K 65.3 2.2 0.00016 31.5 3.3 63 116-178 36-103 (148)
2 d1hnja2 c.95.1.2 (A:175-317) K 64.7 3.1 0.00022 30.4 3.9 63 116-178 32-98 (143)
3 d1k04a_ a.24.14.1 (A:) FAT dom 64.0 3.9 0.00029 31.3 4.5 115 83-207 4-133 (142)
4 d1vcsa1 a.47.2.1 (A:8-96) Vesi 56.0 25 0.0018 24.0 7.3 65 92-160 3-68 (89)
5 d1ub7a2 c.95.1.2 (A:174-322) K 49.3 8.5 0.00062 27.9 4.1 62 117-178 36-101 (149)
6 d2elba1 a.238.1.1 (A:6-273) DC 48.6 15 0.0011 28.1 5.8 59 122-181 83-145 (268)
7 d2b0ha1 a.24.9.2 (A:1838-1973) 44.0 48 0.0035 23.3 7.7 54 103-157 60-113 (136)
8 d1sj8a2 a.216.1.1 (A:658-782) 39.7 54 0.004 22.7 10.3 88 120-207 8-99 (125)
9 d1jiga_ a.25.1.1 (A:) Dodecame 38.9 9.3 0.00067 27.1 2.8 53 21-73 93-145 (146)
10 d2fjca1 a.25.1.1 (A:27-177) Do 37.0 14 0.001 26.3 3.5 54 20-73 96-149 (151)
11 d1ku9a_ a.4.5.36 (A:) DNA-bind 36.2 27 0.0019 24.1 5.0 42 103-144 108-150 (151)
12 d1j7na1 d.92.1.14 (A:27-263) A 33.8 9.6 0.0007 31.1 2.3 17 137-154 144-160 (237)
13 d2yw6a1 a.25.1.1 (A:17-157) Do 33.0 21 0.0015 25.0 3.9 41 21-62 89-129 (141)
14 d1xa6a1 a.116.1.1 (A:271-466) 32.3 4.8 0.00035 29.9 0.2 104 46-158 17-132 (196)
15 d2b0ha1 a.24.9.2 (A:1838-1973) 32.2 75 0.0055 22.1 10.3 122 86-207 3-133 (136)
16 d1dg9a_ c.44.1.1 (A:) Tyrosine 31.5 25 0.0018 24.6 4.2 87 51-141 55-156 (157)
17 d1p8aa_ c.44.1.1 (A:) Tyrosine 29.4 13 0.00095 26.0 2.2 83 51-142 49-144 (146)
18 d1u89a1 a.216.1.1 (A:752-889) 29.2 49 0.0036 23.6 5.6 77 123-209 16-93 (138)
19 d1lvfa_ a.47.2.1 (A:) Syntaxin 29.0 12 0.0009 26.1 2.0 25 114-138 79-103 (106)
20 d1oaia_ a.5.2.3 (A:) FG-bindin 26.4 17 0.0012 23.3 2.2 48 52-116 8-55 (59)
21 d1ng6a_ a.182.1.1 (A:) Hypothe 25.3 1.2E+02 0.0084 22.0 8.1 78 25-119 15-97 (148)
22 d2hkva1 a.213.1.2 (A:1-147) Hy 24.1 98 0.0071 20.8 6.5 47 97-143 10-62 (147)
23 d1tqga_ a.24.10.3 (A:) Chemota 24.1 28 0.002 23.1 3.1 47 95-141 56-103 (105)
24 d2ebfx1 a.296.1.1 (X:575-874) 24.0 34 0.0025 28.6 4.1 38 25-62 109-147 (300)
25 d1mzja2 c.95.1.2 (A:184-336) P 23.3 35 0.0025 24.7 3.7 62 117-178 37-103 (153)
26 d1wa8a1 a.25.3.1 (A:1-99) ESAT 23.2 80 0.0058 20.3 5.4 55 123-178 17-71 (99)
27 d1alva_ a.39.1.8 (A:) Calpain 22.7 55 0.004 22.9 4.7 47 18-64 6-58 (173)
28 d1zcaa1 a.66.1.1 (A:83-204) Tr 22.6 59 0.0043 22.5 4.8 72 119-190 5-85 (122)
29 d2gyqa1 a.25.1.4 (A:1-160) Hyp 22.5 75 0.0055 23.6 5.7 81 120-202 12-93 (160)
30 d1azta1 a.66.1.1 (A:88-201) Tr 22.2 63 0.0046 22.6 4.9 70 120-189 1-77 (114)
31 d1nc5a_ a.102.1.6 (A:) Hypothe 21.5 21 0.0015 28.7 2.2 37 104-140 210-246 (363)
32 d1ez3a_ a.47.2.1 (A:) Syntaxin 21.4 56 0.0041 22.3 4.4 58 122-179 52-110 (124)
33 d2b7ka1 c.47.1.10 (A:111-279) 21.3 9 0.00066 25.8 -0.1 16 125-140 154-169 (169)
34 d2dfka1 a.87.1.1 (A:37-239) Rh 20.9 98 0.0071 22.0 5.9 46 95-144 153-198 (203)
No 1
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=65.30 E-value=2.2 Score=31.49 Aligned_cols=63 Identities=13% Similarity=0.238 Sum_probs=45.9
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHh----hhhhcCCCCchhHHHHHhhhhh-hhcchhhhHHHHHH
Q psy4283 116 EITDRKTFLETIKEIASAIKKLLDAVN----EVSGFIPGPSNKQALEQRKREF-VKFSKRFSNTLKDY 178 (210)
Q Consensus 116 ei~dR~~FL~tIKeIAsaIK~lLdavN----~v~~~~~~~~~k~~le~~KreF-V~ySKrFS~TLK~Y 178 (210)
.|.=|.-|-.+++.+..+|+++|+.-| +|--.++++.++..++.--+++ +--.|.+.+++.+|
T Consensus 36 ~m~G~~Vf~~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~~~~~~ 103 (148)
T d1u6ea2 36 RLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHT 103 (148)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECCTHHHH
T ss_pred EeecHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhhhHHhh
Confidence 355677899999999999999999655 3433445567788888877776 33456676767766
No 2
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=64.66 E-value=3.1 Score=30.37 Aligned_cols=63 Identities=16% Similarity=0.247 Sum_probs=48.6
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHh----hhhhcCCCCchhHHHHHhhhhhhhcchhhhHHHHHH
Q psy4283 116 EITDRKTFLETIKEIASAIKKLLDAVN----EVSGFIPGPSNKQALEQRKREFVKFSKRFSNTLKDY 178 (210)
Q Consensus 116 ei~dR~~FL~tIKeIAsaIK~lLdavN----~v~~~~~~~~~k~~le~~KreFV~ySKrFS~TLK~Y 178 (210)
.|..|.-|-.+++.++..|+++|+..+ ++.-.++++.++..++.--+.+=--..++-.++.+|
T Consensus 32 ~m~G~~vf~~av~~~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~~~~~ 98 (143)
T d1hnja2 32 TMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRH 98 (143)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCCHHHH
T ss_pred EEEChHHhhhhhhhhhHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhhhhhh
Confidence 366788899999999999999999876 443345557788888887776655556677778777
No 3
>d1k04a_ a.24.14.1 (A:) FAT domain of focal adhesion kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.02 E-value=3.9 Score=31.27 Aligned_cols=115 Identities=19% Similarity=0.361 Sum_probs=74.5
Q ss_pred ccchhcccCChHHHH----HHHHhHHHHHHHhccCCccccchHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHHH
Q psy4283 83 DAVEYKLNRSEDAFQ----ELNKKSCALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQALE 158 (210)
Q Consensus 83 ~~~e~~~~~~e~~f~----el~~kA~~LK~iLSrIPdei~dR~~FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~le 158 (210)
|+.-+.++|.++... .+-+--..|+.=....|.+ .|+..+|+|..++|+||.+|-+++..+| ++.++.+|
T Consensus 4 P~pT~~lDRt~D~Vy~~t~~VVkaV~~ls~~v~~~~~~-----~Y~~lVK~VG~~Lr~Ll~svD~~~~~lp-~~~~~eIe 77 (142)
T d1k04a_ 4 PPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPE-----EYVPMVKEVGLALRTLLATVDETIPLLP-ASTHREIE 77 (142)
T ss_dssp CCCCSSSCCTTCHHHHHHHHHHHHHHHHHHHHSCCCGG-----GHHHHHHHHHHHHHHHHHHHHHHGGGSC-HHHHHHHH
T ss_pred CCCCCCCCccCChHHHHHHHHHHHHHHHHHHHhhcCch-----HHHHHHHHHHHHHHHHHHHHHHHhccCc-HHHhHHHH
Confidence 344466778777443 3444445555555554432 6899999999999999999999999888 67777777
Q ss_pred Hhhhhhhh----------cchhhh-HHHHHHhhcCCcchhhhhHHHHHHHHHHHHHHHhh
Q psy4283 159 QRKREFVK----------FSKRFS-NTLKDYFKEGQANSVYVSALYLIHQTNMIMVTVKS 207 (210)
Q Consensus 159 ~~KreFV~----------ySKrFS-~TLK~YFkd~~~~~Vf~SAn~Li~qTn~il~t~k~ 207 (210)
.-+|--=+ ..+.++ .||++=+| .++-..|+.|-.=.+.++.+|-+
T Consensus 78 ma~klLskDm~eLi~~MklAqq~~~ttl~~eyr----r~MLsaaH~LA~DaKnLlD~VD~ 133 (142)
T d1k04a_ 78 MAQKLLNSDLGELINKMKLAQQYVMTSLQQEYK----KQMLTAAHALAVDAKNLLDVIDQ 133 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSSSHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH----HHHHHHHHHHHhhhhHHHHHHHH
Confidence 76664322 222332 23333332 34666778887777777777643
No 4
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.04 E-value=25 Score=23.98 Aligned_cols=65 Identities=18% Similarity=0.390 Sum_probs=36.2
Q ss_pred ChHHHHHHHHhHHHHHHHhccCCcc-ccchHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHHHHh
Q psy4283 92 SEDAFQELNKKSCALKKILSRIPDE-ITDRKTFLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQALEQR 160 (210)
Q Consensus 92 ~e~~f~el~~kA~~LK~iLSrIPde-i~dR~~FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~le~~ 160 (210)
.|.+|..+... +.+-|++||.- -.+|+..+..|..=-.--.+||+-..-=..++| ++.|..+-.+
T Consensus 3 YE~~y~~l~a~---i~~kl~~i~~~~geerk~~l~~ie~~leEA~ell~qMelEvr~~p-~s~R~~~~~k 68 (89)
T d1vcsa1 3 YEQDFAVLTAE---ITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIP-PQSRGMYSNR 68 (89)
T ss_dssp SHHHHHHHHHH---HHHHHHHGGGSCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTTHHHHHHH
T ss_pred HHHHHHHHHHH---HHHHHHHHHcCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC-HHHHHHHHHH
Confidence 46677776654 44556777763 346775555544433334455555555556676 5555544433
No 5
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}
Probab=49.25 E-value=8.5 Score=27.95 Aligned_cols=62 Identities=13% Similarity=0.309 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHh----hhhhcCCCCchhHHHHHhhhhhhhcchhhhHHHHHH
Q psy4283 117 ITDRKTFLETIKEIASAIKKLLDAVN----EVSGFIPGPSNKQALEQRKREFVKFSKRFSNTLKDY 178 (210)
Q Consensus 117 i~dR~~FL~tIKeIAsaIK~lLdavN----~v~~~~~~~~~k~~le~~KreFV~ySKrFS~TLK~Y 178 (210)
|.-|.-|-.+++.+..+|+++|+.-+ +|--.++++.++..++.-.+.+=--..++-+++-+|
T Consensus 36 M~G~~vf~~a~~~vp~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~~~~~ 101 (149)
T d1ub7a2 36 MNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVNVDRY 101 (149)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCCHHHH
T ss_pred EccHHHHHHHHHHHHHHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHHHHHHh
Confidence 56788899999999999999998765 443345556777888887776655556666777766
No 6
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.62 E-value=15 Score=28.08 Aligned_cols=59 Identities=15% Similarity=0.163 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhh----cCCCCchhHHHHHhhhhhhhcchhhhHHHHHHhhc
Q psy4283 122 TFLETIKEIASAIKKLLDAVNEVSG----FIPGPSNKQALEQRKREFVKFSKRFSNTLKDYFKE 181 (210)
Q Consensus 122 ~FL~tIKeIAsaIK~lLdavN~v~~----~~~~~~~k~~le~~KreFV~ySKrFS~TLK~YFkd 181 (210)
.|-+++++|++....|++.++..+. .+. ...-+.+...||.|-++++.|-..|-.|=+-
T Consensus 83 ~f~~~~~el~~~~~~l~~~~~~~~~~pL~~f~-~~di~~~ke~kk~fek~~~~yd~~l~k~~~~ 145 (268)
T d2elba1 83 QFSKVIDELSSCHAVLSTQLADAMMFPITQFK-ERDLKEILTLKEVFQIASNDHDAAINRYSRL 145 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHT-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4888999999999999988877533 222 2334555678999999999999999998754
No 7
>d2b0ha1 a.24.9.2 (A:1838-1973) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.97 E-value=48 Score=23.27 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=29.8
Q ss_pred HHHHHHHhccCCccccchHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHH
Q psy4283 103 SCALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQAL 157 (210)
Q Consensus 103 A~~LK~iLSrIPdei~dR~~FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~l 157 (210)
+.+-|..-+.+||. .-+..+++..|+++.+.-+|+.+...+..+-.++..++.|
T Consensus 60 ~~~~k~~A~~~~~~-~~q~~ll~~ak~v~~s~~~Lv~aak~~~~nP~d~~~~~~L 113 (136)
T d2b0ha1 60 ASQAKPAAVAAENE-EIGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKEL 113 (136)
T ss_dssp HHHHHHHHTTCSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHH
Confidence 34445555555543 3445666777777777777777776665443333333333
No 8
>d1sj8a2 a.216.1.1 (A:658-782) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.75 E-value=54 Score=22.71 Aligned_cols=88 Identities=7% Similarity=0.035 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHHHHhhhhhhhcchhhhHHHHHH---hhcC-CcchhhhhHHHHH
Q psy4283 120 RKTFLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQALEQRKREFVKFSKRFSNTLKDY---FKEG-QANSVYVSALYLI 195 (210)
Q Consensus 120 R~~FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~le~~KreFV~ySKrFS~TLK~Y---Fkd~-~~~~Vf~SAn~Li 195 (210)
+..++.+=|.||.+++.|..+++.+.....++..++.|=.-=+++...+-.....=|.- ..|. .+..+-.+|..+-
T Consensus 8 ~e~Li~~AK~va~a~~~Lv~~ak~~a~~~~d~~~q~~Li~aa~~v~~~t~qLv~~aK~~a~~~~d~~~q~~L~~aak~V~ 87 (125)
T d1sj8a2 8 QDVLMQLANAVASAAAALVLKAKSVAQRTEDSGLQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLVEAGRLVA 87 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 45788888999999999999999998776666555555444444444433333222221 1111 1234666777777
Q ss_pred HHHHHHHHHHhh
Q psy4283 196 HQTNMIMVTVKS 207 (210)
Q Consensus 196 ~qTn~il~t~k~ 207 (210)
+-+|.++...+.
T Consensus 88 ~a~~~Lv~a~~~ 99 (125)
T d1sj8a2 88 KAVEGCVSASQA 99 (125)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 777777776664
No 9
>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}
Probab=38.85 E-value=9.3 Score=27.10 Aligned_cols=53 Identities=19% Similarity=0.176 Sum_probs=37.6
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHhcCCCcccchhHH
Q psy4283 21 ILSQLEKRDVQASQTLRAALSRTETANPGFAYDFVVGIMRQGELSVNMNESIL 73 (210)
Q Consensus 21 vl~eLe~kd~~A~qtLRaAf~kAE~~~PGft~dfV~~IL~r~~~~vn~~EslL 73 (210)
++..+-......+..+|.++..|++..---|.+++.++++..+-.+-|=+|.|
T Consensus 93 ~l~~ll~~~~~~~~~~r~~i~~a~~~~D~~t~dll~~~~~~~Ek~~W~L~s~L 145 (146)
T d1jiga_ 93 MVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAFL 145 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34555555567899999999999998666678888888886644444444433
No 10
>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}
Probab=36.99 E-value=14 Score=26.26 Aligned_cols=54 Identities=11% Similarity=0.098 Sum_probs=41.1
Q ss_pred HHHHHHhhhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHhcCCCcccchhHH
Q psy4283 20 PILSQLEKRDVQASQTLRAALSRTETANPGFAYDFVVGIMRQGELSVNMNESIL 73 (210)
Q Consensus 20 Pvl~eLe~kd~~A~qtLRaAf~kAE~~~PGft~dfV~~IL~r~~~~vn~~EslL 73 (210)
.++..+......++..+|.++..|+...-.-|.+++.++++..+-.+=|=+|.|
T Consensus 96 ~~l~~l~~~~~~~~~~~~~~~~~a~~~~D~~t~~ll~~i~~~~Ek~~WmL~a~L 149 (151)
T d2fjca1 96 SALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDILRTLGKAIWMLGATL 149 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456677777778999999999999999777788999999887654444444444
No 11
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=36.25 E-value=27 Score=24.06 Aligned_cols=42 Identities=24% Similarity=0.348 Sum_probs=28.1
Q ss_pred HHHHHHHhccCCccccch-HHHHHHHHHHHHHHHHHHHHHhhh
Q psy4283 103 SCALKKILSRIPDEITDR-KTFLETIKEIASAIKKLLDAVNEV 144 (210)
Q Consensus 103 A~~LK~iLSrIPdei~dR-~~FL~tIKeIAsaIK~lLdavN~v 144 (210)
...|+.+++.+|++-.++ ...++.|..+.+-+++++++++++
T Consensus 108 ~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~l~~~ 150 (151)
T d1ku9a_ 108 YEDLKKLEEKCNEEEKEFIKQKIKGIERMKKISEKILEALNDL 150 (151)
T ss_dssp HHHHHHHHHHSCTTSHHHHHHHHHHHTHHHHHHHHHHHGGGGC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 356677788888765333 244566666677788888887764
No 12
>d1j7na1 d.92.1.14 (A:27-263) Anthrax toxin lethal factor, N- and C-terminal domains {Bacillus anthracis [TaxId: 1392]}
Probab=33.84 E-value=9.6 Score=31.07 Aligned_cols=17 Identities=18% Similarity=0.349 Sum_probs=8.7
Q ss_pred HHHHHhhhhhcCCCCchh
Q psy4283 137 LLDAVNEVSGFIPGPSNK 154 (210)
Q Consensus 137 lLdavN~v~~~~~~~~~k 154 (210)
+|||+|.+ +.-++..++
T Consensus 144 Fl~ain~i-~~~~Dsdg~ 160 (237)
T d1j7na1 144 FLDVLNTI-KNASDSDGQ 160 (237)
T ss_dssp HHHHHHHH-HTSSSSHHH
T ss_pred HHHHHHHH-hcCCCchhH
Confidence 45556666 444445554
No 13
>d2yw6a1 a.25.1.1 (A:17-157) Dodecameric ferritin homolog {Mycobacterium smegmatis [TaxId: 1772]}
Probab=33.02 E-value=21 Score=25.04 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=32.1
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHhc
Q psy4283 21 ILSQLEKRDVQASQTLRAALSRTETANPGFAYDFVVGIMRQG 62 (210)
Q Consensus 21 vl~eLe~kd~~A~qtLRaAf~kAE~~~PGft~dfV~~IL~r~ 62 (210)
++..+.......+..+|+++..||..-|| |.||+..+++..
T Consensus 89 ~l~~l~~~~~~~~~~~r~~~~~a~~~D~~-T~dll~~~~~~~ 129 (141)
T d2yw6a1 89 HLAALDLVYNGVIEDTRKSIEKLEDLDLV-SQDLLIAHAGEL 129 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCHH-HHHHHHHHHHHH
Confidence 34555555567889999999999987787 789998988754
No 14
>d1xa6a1 a.116.1.1 (A:271-466) Beta-chimaerin, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.35 E-value=4.8 Score=29.87 Aligned_cols=104 Identities=22% Similarity=0.342 Sum_probs=58.0
Q ss_pred cCCCchHHHHHHHHHhcCCCcccchhHHHhhccCCCCccchh--cccCCh--H-----HHHHHHHhHHHHHHHhccCCcc
Q psy4283 46 ANPGFAYDFVVGIMRQGELSVNMNESILRLQGAASDVDAVEY--KLNRSE--D-----AFQELNKKSCALKKILSRIPDE 116 (210)
Q Consensus 46 ~~PGft~dfV~~IL~r~~~~vn~~EslLr~a~~~~~~~~~e~--~~~~~e--~-----~f~el~~kA~~LK~iLSrIPde 116 (210)
.-|=+..+.+..| ++.|++ +|-+.|..|+.+.. +++ .+++.. . ...+.-.=|..||+.|..+|+-
T Consensus 17 ~iP~iv~~~i~~l-~~~gl~---~eGiFR~~g~~~~v--~~l~~~~~~~~~~~~~~~~~~~d~~~va~~lK~fLr~Lp~p 90 (196)
T d1xa6a1 17 QRPMVVDICIREI-EARGLK---SEGLYRVSGFTEHI--EDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIP 90 (196)
T ss_dssp SSCHHHHHHHHHH-HHSCSS---STTTTTSCCCHHHH--HHHHHHHSSTTTTSCCCSSSSCCTHHHHHHHHHHHHHCSSC
T ss_pred CCChHHHHHHHHH-HHhCCC---CCCeeeeCCCHHHH--HHHHHHHhcCCCccccccccccchhHHHHHHHHHHHhCCCc
Confidence 4699999999876 556765 58889999884221 111 122211 1 1113445678899999999987
Q ss_pred ccchHHHHHH---HHHHHHHHHHHHHHHhhhhhcCCCCchhHHHH
Q psy4283 117 ITDRKTFLET---IKEIASAIKKLLDAVNEVSGFIPGPSNKQALE 158 (210)
Q Consensus 117 i~dR~~FL~t---IKeIAsaIK~lLdavN~v~~~~~~~~~k~~le 158 (210)
+=...-+-+. .+. +.-.+-++++..++..+| +.++..|.
T Consensus 91 li~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~LP-~~n~~~L~ 132 (196)
T d1xa6a1 91 VITYDTYSKFIDAAKI--SNADERLEAVHEVLMLLP-PAHYETLR 132 (196)
T ss_dssp TTCSTTHHHHHTTTTC--CCHHHHHHHHHHHHTTSC-HHHHHHHH
T ss_pred cCCHHHHHHHHHHHhc--cchhHHHHHHHHHHHHCC-HHHHHHHH
Confidence 7655533322 221 011223455555555555 44544444
No 15
>d2b0ha1 a.24.9.2 (A:1838-1973) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.23 E-value=75 Score=22.12 Aligned_cols=122 Identities=8% Similarity=0.118 Sum_probs=71.7
Q ss_pred hhcccCChHHHHHHHHhH-HHHHHHhccCCccc----cchHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHHHHh
Q psy4283 86 EYKLNRSEDAFQELNKKS-CALKKILSRIPDEI----TDRKTFLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQALEQR 160 (210)
Q Consensus 86 e~~~~~~e~~f~el~~kA-~~LK~iLSrIPdei----~dR~~FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~le~~ 160 (210)
-|.+.-++..|++...+- .+-|.|.+...+-+ ++-...-..-|++|.++..|.+++-.+.....++..+..|-+.
T Consensus 3 ~~~~~~~~~sf~~~Q~~~~~~ak~l~~~~~~lv~~a~~~~~~L~~~a~~~a~~~~~L~~~~k~~A~~~~~~~~q~~ll~~ 82 (136)
T d2b0ha1 3 PFTMGDPEGSFVDYQTTMVRTAKAIAVTVQEMVTKSNTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHR 82 (136)
T ss_dssp TTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 477777777777665543 23334444333322 2223577889999999999999999998877765444444333
Q ss_pred hhhhhhcchhhhHHHHHHh---hcC-CcchhhhhHHHHHHHHHHHHHHHhh
Q psy4283 161 KREFVKFSKRFSNTLKDYF---KEG-QANSVYVSALYLIHQTNMIMVTVKS 207 (210)
Q Consensus 161 KreFV~ySKrFS~TLK~YF---kd~-~~~~Vf~SAn~Li~qTn~il~t~k~ 207 (210)
=|+-..-|-.-=..-|..= .|. ....+-.+|..+..-.|.+|.+++.
T Consensus 83 ak~v~~s~~~Lv~aak~~~~nP~d~~~~~~L~~aAr~V~esv~~Ll~alq~ 133 (136)
T d2b0ha1 83 VQELGHGCSALVTKAGALQCSPSDVYTKKELIECARRVSEKVSHVLAALQA 133 (136)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333222222212222221 122 1235677788888888888888875
No 16
>d1dg9a_ c.44.1.1 (A:) Tyrosine phosphatase {Cow (Bos taurus) [TaxId: 9913]}
Probab=31.49 E-value=25 Score=24.59 Aligned_cols=87 Identities=22% Similarity=0.294 Sum_probs=50.6
Q ss_pred hHHHHHHHHHhcCCCcccchhHHHhhccCCCCccchhcccCChHHHHHHHHhHHHHHH----H--h--------ccCCcc
Q psy4283 51 AYDFVVGIMRQGELSVNMNESILRLQGAASDVDAVEYKLNRSEDAFQELNKKSCALKK----I--L--------SRIPDE 116 (210)
Q Consensus 51 t~dfV~~IL~r~~~~vn~~EslLr~a~~~~~~~~~e~~~~~~e~~f~el~~kA~~LK~----i--L--------SrIPde 116 (210)
-+.-+..+++..|+++.-.-+ +-+..+...-|+.+...+.-..+|.+..-.... | | .-|||=
T Consensus 55 ~~~~a~~~l~~~gid~~~~~~----~~~~~~~~~~DlIl~m~~~~~~~l~~~~p~~~~~~~kv~~l~~~~~~~~~~I~DP 130 (157)
T d1dg9a_ 55 PDPRAVSCLRNHGINTAHKAR----QVTKEDFVTFDYILCMDESNLRDLNRKSNQVKNCRAKIELLGSYDPQKQLIIEDP 130 (157)
T ss_dssp CCHHHHHHHHHTTCCCCCCCC----BCCTTHHHHCSEEEESSHHHHHHHHHHHTTCTTCCCEEEEGGGGCTTCCCCCCCC
T ss_pred CCHHHHHHHHhcCcccccchh----hhhHHhhhcccccccchHHHHHHHHHhCCccccchheeeehhhhCCCCCCcCCCC
Confidence 355677788888776432111 111111111267777777766666554321111 1 1 124553
Q ss_pred c-cchHHHHHHHHHHHHHHHHHHHHH
Q psy4283 117 I-TDRKTFLETIKEIASAIKKLLDAV 141 (210)
Q Consensus 117 i-~dR~~FL~tIKeIAsaIK~lLdav 141 (210)
. .+...|.++..+|..+|+.||+.+
T Consensus 131 y~~~~~~f~~~~~~I~~~v~~ll~~l 156 (157)
T d1dg9a_ 131 YYGNDADFETVYQQCVRCCRAFLEKV 156 (157)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 346799999999999999999865
No 17
>d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus [TaxId: 5724]}
Probab=29.43 E-value=13 Score=26.03 Aligned_cols=83 Identities=7% Similarity=0.134 Sum_probs=52.1
Q ss_pred hHHHHHHHHHhcCCCcc------cchhHHHhhccCCCCccchhcccCChHHHHHHHHhHH-HHHHHh------ccCCccc
Q psy4283 51 AYDFVVGIMRQGELSVN------MNESILRLQGAASDVDAVEYKLNRSEDAFQELNKKSC-ALKKIL------SRIPDEI 117 (210)
Q Consensus 51 t~dfV~~IL~r~~~~vn------~~EslLr~a~~~~~~~~~e~~~~~~e~~f~el~~kA~-~LK~iL------SrIPdei 117 (210)
.+..+..+++..|+++. +++..+. .-||.+...+.-..++....- ..+..+ .-|||-.
T Consensus 49 ~~~~a~~~l~~~gi~~~~h~sr~l~~~~~~---------~~DlIl~M~~~~~~~l~~~~p~~~~~~~~~~~~~~~I~DPy 119 (146)
T d1p8aa_ 49 PDTRSQKVCKSNGVDISKQRARQITKADFS---------KFDVIAALDQSILSDINSMKPSNCRAKVVLFNPPNGVDDPY 119 (146)
T ss_dssp CTHHHHHHHHHHSCCCCCCCCCCCCSHHHH---------SCSEEEESSHHHHHHHHHHCCSSCSCEEEECSCTTSSCCCS
T ss_pred CchhHHHHHHHhCcchhhhccccccHHHhh---------hccchhhccHHHHHHHHhhcccccceEEEecCCCCCCCCCC
Confidence 46777788888887643 2222222 125777777666666554321 111111 3588887
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHh
Q psy4283 118 TDRKTFLETIKEIASAIKKLLDAVN 142 (210)
Q Consensus 118 ~dR~~FL~tIKeIAsaIK~lLdavN 142 (210)
.-...|-+++.+|..+|+.||+-.+
T Consensus 120 ~~~~~f~~~~~~I~~~i~~ll~~~~ 144 (146)
T d1p8aa_ 120 YSSDGFPTMFASISKEMKPFLTEHG 144 (146)
T ss_dssp SSSSSHHHHHHHHHHTTHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHHHHHHHHcC
Confidence 5455799999999999999997543
No 18
>d1u89a1 a.216.1.1 (A:752-889) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.16 E-value=49 Score=23.62 Aligned_cols=77 Identities=13% Similarity=0.153 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHHHHhhhhhhhcchhhhHHHHHHhhcC-CcchhhhhHHHHHHHHHHH
Q psy4283 123 FLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQALEQRKREFVKFSKRFSNTLKDYFKEG-QANSVYVSALYLIHQTNMI 201 (210)
Q Consensus 123 FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~le~~KreFV~ySKrFS~TLK~YFkd~-~~~~Vf~SAn~Li~qTn~i 201 (210)
.++.=+.|+.+|.+||-++...... + .....|=.-++.+-.+-+.|+.+. +...+-..|-..-..|+.+
T Consensus 16 L~~AA~~v~~Al~dLl~~~~~~~~~---~-------~~~~~~~~a~~~il~~~~~l~~~~~~~~~li~aAk~va~a~~~L 85 (138)
T d1u89a1 16 VGAAATAVTQALNELLQHVKAHATG---A-------GPAGRYDQATDTILTVTENIFSSMGDAGEMVRQARILAQATSDL 85 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSCC---S-------SSCSCCHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---C-------cccccHhHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHH
Confidence 4455566666666666555433111 1 112344455566666666777774 4444455555555667777
Q ss_pred HHHHhhhc
Q psy4283 202 MVTVKSKC 209 (210)
Q Consensus 202 l~t~k~~~ 209 (210)
+.++|..+
T Consensus 86 v~aak~~a 93 (138)
T d1u89a1 86 VNAIKADA 93 (138)
T ss_dssp HHHHHHHG
T ss_pred HHHHHHHH
Confidence 77776644
No 19
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=29.01 E-value=12 Score=26.07 Aligned_cols=25 Identities=24% Similarity=0.519 Sum_probs=20.1
Q ss_pred CccccchHHHHHHHHHHHHHHHHHH
Q psy4283 114 PDEITDRKTFLETIKEIASAIKKLL 138 (210)
Q Consensus 114 Pdei~dR~~FL~tIKeIAsaIK~lL 138 (210)
|+||+.|+.|+..|++--+.||+=|
T Consensus 79 ~~ei~~Rr~fi~~~~~~I~~~~~~l 103 (106)
T d1lvfa_ 79 ATELSIRKAFITSTRQIVRDMKDQM 103 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999988666666544
No 20
>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.41 E-value=17 Score=23.33 Aligned_cols=48 Identities=23% Similarity=0.421 Sum_probs=34.8
Q ss_pred HHHHHHHHHhcCCCcccchhHHHhhccCCCCccchhcccCChHHHHHHHHhHHHHHHHhccCCcc
Q psy4283 52 YDFVVGIMRQGELSVNMNESILRLQGAASDVDAVEYKLNRSEDAFQELNKKSCALKKILSRIPDE 116 (210)
Q Consensus 52 ~dfV~~IL~r~~~~vn~~EslLr~a~~~~~~~~~e~~~~~~e~~f~el~~kA~~LK~iLSrIPde 116 (210)
+++|..+..+.|++....+-+|-=.+= +| ++--..|++|..+ .+||+|
T Consensus 8 q~mv~~~s~~T~mn~e~s~~cLe~~~W-------d~--~~A~~~F~~l~~~--------~~IP~e 55 (59)
T d1oaia_ 8 QEMLQAFSTQSGMNLEWSQKCLQDNNW-------DY--TRSAQAFTHLKAK--------GEIPEV 55 (59)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTT-------CH--HHHHHHHHHHHHT--------TCSCGG
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHcCC-------CH--HHHHHHHHHHHhC--------CCCCHH
Confidence 579999999999999999999855444 23 2334467776665 578876
No 21
>d1ng6a_ a.182.1.1 (A:) Hypothetical protein YqeY {Bacillus subtilis [TaxId: 1423]}
Probab=25.28 E-value=1.2e+02 Score=22.03 Aligned_cols=78 Identities=13% Similarity=0.280 Sum_probs=45.0
Q ss_pred HhhhcH---HHHHHHHHHHHHHHhc--CCCchHHHHHHHHHhcCCCcccchhHHHhhccCCCCccchhcccCChHHHHHH
Q psy4283 25 LEKRDV---QASQTLRAALSRTETA--NPGFAYDFVVGIMRQGELSVNMNESILRLQGAASDVDAVEYKLNRSEDAFQEL 99 (210)
Q Consensus 25 Le~kd~---~A~qtLRaAf~kAE~~--~PGft~dfV~~IL~r~~~~vn~~EslLr~a~~~~~~~~~e~~~~~~e~~f~el 99 (210)
++.+|. .++..|.+++...|.. .++++++-+..++++. +.---. ..+.|.-.++.+-....
T Consensus 15 Mkakd~~~~~~LR~l~a~ik~~~~~~~~~~~~d~~v~~vi~k~----------vKqr~e----s~e~y~~~~r~dl~e~e 80 (148)
T d1ng6a_ 15 MKNREKDKLTVVRMVKASLQNEAIKLKKDSLTEDEELTVLSRE----------LKQRKD----SLQEFSNANRLDLVDKV 80 (148)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHH----------HHHHHH----HHHHHHHHTCHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHH----------HHHHHH----HHHHHHhcccHHHHHHH
Confidence 334565 3666677888777754 4579999888888854 111111 12356555555544444
Q ss_pred HHhHHHHHHHhccCCccccc
Q psy4283 100 NKKSCALKKILSRIPDEITD 119 (210)
Q Consensus 100 ~~kA~~LK~iLSrIPdei~d 119 (210)
......|..- +|..+++
T Consensus 81 ~~Ei~il~~y---LP~~lse 97 (148)
T d1ng6a_ 81 QKELDILEVY---LPEQLSE 97 (148)
T ss_dssp HHHHHHHGGG---SCCCCCH
T ss_pred HHHHHHHHHH---ccccCCH
Confidence 4444555444 5877764
No 22
>d2hkva1 a.213.1.2 (A:1-147) Hypothetical protein ExigDRAFT_2445 {Exiguobacterium sibiricum 255-15 [TaxId: 262543]}
Probab=24.13 E-value=98 Score=20.77 Aligned_cols=47 Identities=13% Similarity=0.156 Sum_probs=38.1
Q ss_pred HHHHHhHHHHHHHhccCCccccch------HHHHHHHHHHHHHHHHHHHHHhh
Q psy4283 97 QELNKKSCALKKILSRIPDEITDR------KTFLETIKEIASAIKKLLDAVNE 143 (210)
Q Consensus 97 ~el~~kA~~LK~iLSrIPdei~dR------~~FL~tIKeIAsaIK~lLdavN~ 143 (210)
.++..-.+..+++|+.||+|--|. ++|-+++.-||.+..-.++.++.
T Consensus 10 ~~~~~~~~~t~~~l~~l~~e~~~~kp~~~~~Si~el~~Hi~~~~~~~~~~~~g 62 (147)
T d2hkva1 10 RHVGVGVRTTRDLIRLIQPEDWDKRPISGKRSVYEVAVHLAVLLEADLRIATG 62 (147)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGTTCCSSTTSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCHHHcCCCCCCCCCCHHHHHHHHHHHHhHHHHHhcC
Confidence 355666677889999999996554 49999999999999888887764
No 23
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.05 E-value=28 Score=23.13 Aligned_cols=47 Identities=23% Similarity=0.399 Sum_probs=33.3
Q ss_pred HHHHHHHhHHHHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHHHH
Q psy4283 95 AFQELNKKSCALKKILSRIPD-EITDRKTFLETIKEIASAIKKLLDAV 141 (210)
Q Consensus 95 ~f~el~~kA~~LK~iLSrIPd-ei~dR~~FL~tIKeIAsaIK~lLdav 141 (210)
.|..+..-|..+-.+|+.+-+ ++.--..+...+-+....|+.++|.|
T Consensus 56 gl~~i~~lah~lE~~l~~~~~~~~~~~~~~~~~l~~~~d~l~~~l~~l 103 (105)
T d1tqga_ 56 GFSSMAKLCHTLENILDKARNSEIKITSDLLDKIFAGVDMITRMVDKI 103 (105)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 566777777777777776644 34444677788888888888888765
No 24
>d2ebfx1 a.296.1.1 (X:575-874) Dermonecrotic toxin, ToxA {Pasteurella multocida [TaxId: 747]}
Probab=24.00 E-value=34 Score=28.61 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=32.1
Q ss_pred HhhhcH-HHHHHHHHHHHHHHhcCCCchHHHHHHHHHhc
Q psy4283 25 LEKRDV-QASQTLRAALSRTETANPGFAYDFVVGIMRQG 62 (210)
Q Consensus 25 Le~kd~-~A~qtLRaAf~kAE~~~PGft~dfV~~IL~r~ 62 (210)
|.++.+ .|+.-+|-|...+--.+||+|++++.-++++-
T Consensus 109 la~t~~~~Aa~~y~~a~~E~~g~~~glT~~~~r~~~edp 147 (300)
T d2ebfx1 109 IPNKGSGAARFLLRTAMNEMAGKTSESTADLIRFALQDT 147 (300)
T ss_dssp SSCTTSSHHHHHHHHHHHHHHTSSCSCHHHHHHHHHHCT
T ss_pred HhhcChHHHHHHHHHHHHHhcCCCcchHHHHHHHHhcCC
Confidence 333444 48899999999999999999999999999975
No 25
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}
Probab=23.33 E-value=35 Score=24.66 Aligned_cols=62 Identities=13% Similarity=0.275 Sum_probs=43.1
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHh----hhhhcCCCCchhHHHHHhhhhhhhcchh-hhHHHHHH
Q psy4283 117 ITDRKTFLETIKEIASAIKKLLDAVN----EVSGFIPGPSNKQALEQRKREFVKFSKR-FSNTLKDY 178 (210)
Q Consensus 117 i~dR~~FL~tIKeIAsaIK~lLdavN----~v~~~~~~~~~k~~le~~KreFV~ySKr-FS~TLK~Y 178 (210)
|.=|.-|-.+++.+..+|+++|+..+ +|.-.++++.+++.++.--+++=--..+ ++.++.+|
T Consensus 37 m~G~~v~~~av~~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~~~~~~ 103 (153)
T d1mzja2 37 MDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSRDAEDT 103 (153)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECCTHHHH
T ss_pred EcCHHHHHHHHHHHHHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchhhhhhc
Confidence 44567788999999999999999764 4444455577888888776654322333 55567666
No 26
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.17 E-value=80 Score=20.35 Aligned_cols=55 Identities=11% Similarity=0.172 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHHHHhhhhhhhcchhhhHHHHHH
Q psy4283 123 FLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQALEQRKREFVKFSKRFSNTLKDY 178 (210)
Q Consensus 123 FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~le~~KreFV~ySKrFS~TLK~Y 178 (210)
|=.+..+|-+.+..|-..|+.+-.... +..+.+-.+.-.++-.-..++-+.|.++
T Consensus 17 ~~~~~~~l~~~l~~l~~~v~~l~~~W~-G~A~~af~~~~~~w~~~~~~l~~~L~~i 71 (99)
T d1wa8a1 17 FERISGDLKTQIDQVESTAGSLQGQWR-GAAGTAAQAAVVRFQEAANKQKQELDEI 71 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCC-SSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445555555555544444 4455555555555555555555555443
No 27
>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=22.67 E-value=55 Score=22.85 Aligned_cols=47 Identities=23% Similarity=0.386 Sum_probs=26.7
Q ss_pred HhHHHHHHhhhcHH-HHHHHHHHHHHHHh-----cCCCchHHHHHHHHHhcCC
Q psy4283 18 FRPILSQLEKRDVQ-ASQTLRAALSRTET-----ANPGFAYDFVVGIMRQGEL 64 (210)
Q Consensus 18 i~Pvl~eLe~kd~~-A~qtLRaAf~kAE~-----~~PGft~dfV~~IL~r~~~ 64 (210)
++.+|.++...|.. ....|+.++.+... ..++++.+.+..++...+.
T Consensus 6 ~r~~F~~~d~~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 58 (173)
T d1alva_ 6 FRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDS 58 (173)
T ss_dssp HHHHHHHHHGGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhcc
Confidence 35666666644332 55666766666533 3445666666666655544
No 28
>d1zcaa1 a.66.1.1 (A:83-204) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.58 E-value=59 Score=22.47 Aligned_cols=72 Identities=13% Similarity=0.087 Sum_probs=39.8
Q ss_pred chHHHHHHHHH-HHHHHHHHHHHHhhhhhcCCCCchhHHHHHhhh---h-----hhhcchhhhHHHHHHhhcCCcchhhh
Q psy4283 119 DRKTFLETIKE-IASAIKKLLDAVNEVSGFIPGPSNKQALEQRKR---E-----FVKFSKRFSNTLKDYFKEGQANSVYV 189 (210)
Q Consensus 119 dR~~FL~tIKe-IAsaIK~lLdavN~v~~~~~~~~~k~~le~~Kr---e-----FV~ySKrFS~TLK~YFkd~~~~~Vf~ 189 (210)
+|..|..+|-. |-.++|.||+|....--.+..+.++...+.-.. + .-.......+.++...+|.....+|.
T Consensus 5 E~~~~r~~I~~Nii~~~~~Li~am~~l~i~~~~~~n~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~LW~D~~Iq~~~~ 84 (122)
T d1zcaa1 5 ALLEFRDTIFDNILKGSRVLVDARDKLGIPWQHSENEKHGMFLMAFENKAGLPVEPATFQLYVPALSALWRDSGIREAFS 84 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSGGGHHHHHHHHTCCCTTCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHcCCCCCChhhHHHHHHHHhcccccCCCCCccchHHHHHHHHHHHCCHHHHHHHH
Confidence 57788888865 999999999999875212222333222111100 0 00111223456777777766655554
Q ss_pred h
Q psy4283 190 S 190 (210)
Q Consensus 190 S 190 (210)
.
T Consensus 85 r 85 (122)
T d1zcaa1 85 R 85 (122)
T ss_dssp T
T ss_pred h
Confidence 3
No 29
>d2gyqa1 a.25.1.4 (A:1-160) Hypothetical ptotein RPA3308 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=22.51 E-value=75 Score=23.55 Aligned_cols=81 Identities=17% Similarity=0.177 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCchhHHHHHhhhhhhhcchhhhHHHHHHhhcCCcchhhhhH-HHHHHHH
Q psy4283 120 RKTFLETIKEIASAIKKLLDAVNEVSGFIPGPSNKQALEQRKREFVKFSKRFSNTLKDYFKEGQANSVYVSA-LYLIHQT 198 (210)
Q Consensus 120 R~~FL~tIKeIAsaIK~lLdavN~v~~~~~~~~~k~~le~~KreFV~ySKrFS~TLK~YFkd~~~~~Vf~SA-n~Li~qT 198 (210)
+--|+..+++|=++=|.+++++....+...+|.-|.++++.-.|--+-..|.-.-++.. +.++..+=--| .-||...
T Consensus 12 ~dlfi~~L~d~y~aE~q~~~al~~m~~~a~~peLk~~l~~H~~eT~~qi~rLe~i~~~l--g~~p~~~~c~am~gli~e~ 89 (160)
T d2gyqa1 12 EDLLLHGLRDIYYAEQQITKALPKMIEQATNRDLSQGLTSHLEETQKQIERLDQVFKKL--GQKPSGVNCPAIDGLIKEA 89 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCSCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCccHHHHHHHHHH
Confidence 45799999999999999999999999988889999999999999888877765555544 33444443222 3344444
Q ss_pred HHHH
Q psy4283 199 NMIM 202 (210)
Q Consensus 199 n~il 202 (210)
.-++
T Consensus 90 ~~~~ 93 (160)
T d2gyqa1 90 DETA 93 (160)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 30
>d1azta1 a.66.1.1 (A:88-201) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.21 E-value=63 Score=22.57 Aligned_cols=70 Identities=17% Similarity=0.307 Sum_probs=44.3
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHHhhhhhcC--CCCchhHHHHH---hhhh-hhhcchhhhHHHHHHhhcCCcchhhh
Q psy4283 120 RKTFLETIK-EIASAIKKLLDAVNEVSGFI--PGPSNKQALEQ---RKRE-FVKFSKRFSNTLKDYFKEGQANSVYV 189 (210)
Q Consensus 120 R~~FL~tIK-eIAsaIK~lLdavN~v~~~~--~~~~~k~~le~---~Kre-FV~ySKrFS~TLK~YFkd~~~~~Vf~ 189 (210)
|++|.+.|. .|-.+++-|++|....-.-+ ..++++...+. ...+ =..+...+.+.+|...+|.....+|.
T Consensus 1 ~~~~i~~I~~Nii~sm~~li~Am~~L~~~i~~~~~~n~~~~~~i~~~~~~~~~~~~~e~~~~i~~LW~D~giq~~~~ 77 (114)
T d1azta1 1 KATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEGVRACYE 77 (114)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCSSGGGHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHhcccccCcccCHHHHHHHHHHhCCHHHHHHHH
Confidence 678888885 58889999999999762222 22343322111 1111 11366788899999999976666664
No 31
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]}
Probab=21.45 E-value=21 Score=28.68 Aligned_cols=37 Identities=16% Similarity=0.443 Sum_probs=33.2
Q ss_pred HHHHHHhccCCccccchHHHHHHHHHHHHHHHHHHHH
Q psy4283 104 CALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDA 140 (210)
Q Consensus 104 ~~LK~iLSrIPdei~dR~~FL~tIKeIAsaIK~lLda 140 (210)
-+|=.+|.-+|+...+|+.++++.+++|.++.++.|.
T Consensus 210 ~gl~~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~q~~ 246 (363)
T d1nc5a_ 210 MSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDK 246 (363)
T ss_dssp HHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhccCC
Confidence 5688899999999999999999999999999887653
No 32
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.40 E-value=56 Score=22.33 Aligned_cols=58 Identities=19% Similarity=0.375 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCCC-CchhHHHHHhhhhhhhcchhhhHHHHHHh
Q psy4283 122 TFLETIKEIASAIKKLLDAVNEVSGFIPG-PSNKQALEQRKREFVKFSKRFSNTLKDYF 179 (210)
Q Consensus 122 ~FL~tIKeIAsaIK~lLdavN~v~~~~~~-~~~k~~le~~KreFV~ySKrFS~TLK~YF 179 (210)
.-..-|+..|..||.-|.++..-....+. .++-...--+|--+---+++|-+.+.+|-
T Consensus 52 ~~~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~s~~~Rir~~q~~~L~~kf~e~m~~yq 110 (124)
T d1ez3a_ 52 ELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYN 110 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778889999999888888544332111 11112333456666677888888888884
No 33
>d2b7ka1 c.47.1.10 (A:111-279) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.25 E-value=9 Score=25.83 Aligned_cols=16 Identities=19% Similarity=0.356 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4283 125 ETIKEIASAIKKLLDA 140 (210)
Q Consensus 125 ~tIKeIAsaIK~lLda 140 (210)
+.+.+|.+.||+||||
T Consensus 154 ~~~~~I~e~ik~ll~~ 169 (169)
T d2b7ka1 154 TGVDKIVEHVKSYVPA 169 (169)
T ss_dssp HHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 4467888999999886
No 34
>d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.89 E-value=98 Score=22.01 Aligned_cols=46 Identities=15% Similarity=0.295 Sum_probs=35.7
Q ss_pred HHHHHHHhHHHHHHHhccCCccccchHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4283 95 AFQELNKKSCALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEV 144 (210)
Q Consensus 95 ~f~el~~kA~~LK~iLSrIPdei~dR~~FL~tIKeIAsaIK~lLdavN~v 144 (210)
-+|++.+=---|+.||...|..=.|+....+.+ ..|+++.+.||+-
T Consensus 153 PvqRi~rY~llL~~llk~t~~~~~d~~~L~~a~----~~i~~~~~~iNe~ 198 (203)
T d2dfka1 153 PVQKICKYPLQLAELLKYTAQDHSDYRYVAAAL----AVMRNVTQQINER 198 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTSTTHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHH----HHHHHHHHHHHHH
Confidence 457777777889999999999888887765555 5677777888874
Done!