Query psy429
Match_columns 243
No_of_seqs 308 out of 1938
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 21:46:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.3E-34 4.5E-39 261.7 10.2 141 101-241 5-168 (427)
2 3qb0_A Actin-related protein 4 100.0 3.7E-31 1.2E-35 242.1 10.2 133 102-240 24-158 (498)
3 4fo0_A Actin-related protein 8 100.0 7.6E-30 2.6E-34 239.3 8.3 139 101-240 15-242 (593)
4 2fxu_A Alpha-actin-1, actin, a 100.0 3.4E-29 1.2E-33 223.0 8.6 139 102-240 6-144 (375)
5 1k8k_B ARP2, actin-like protei 99.9 1.4E-29 4.6E-34 227.0 0.0 139 102-240 7-148 (394)
6 1k8k_A ARP3, actin-like protei 99.9 5E-27 1.7E-31 211.6 9.4 138 102-240 6-151 (418)
7 4am6_A Actin-like protein ARP8 99.9 2.9E-23 9.7E-28 192.5 9.3 139 101-240 40-265 (655)
8 4fo0_A Actin-related protein 8 99.9 1.6E-22 5.3E-27 189.6 12.1 99 2-101 210-313 (593)
9 4am6_A Actin-like protein ARP8 99.8 3.5E-21 1.2E-25 178.6 12.3 99 2-101 233-337 (655)
10 3dwl_A Actin-related protein 3 99.8 1.4E-20 4.8E-25 169.9 9.6 88 2-90 135-230 (427)
11 3qb0_A Actin-related protein 4 99.8 2.7E-20 9.3E-25 170.3 11.3 85 2-87 126-210 (498)
12 2fxu_A Alpha-actin-1, actin, a 99.8 2.2E-18 7.6E-23 153.1 12.1 98 2-100 112-209 (375)
13 1k8k_B ARP2, actin-like protei 99.8 3.3E-19 1.1E-23 159.5 5.8 98 2-100 116-213 (394)
14 1k8k_A ARP3, actin-like protei 99.7 1.7E-16 5.7E-21 142.7 12.3 97 2-100 119-224 (418)
15 1jce_A ROD shape-determining p 99.5 9.1E-14 3.1E-18 121.6 7.4 130 102-240 4-138 (344)
16 1jce_A ROD shape-determining p 98.7 3.9E-08 1.3E-12 85.7 10.2 82 2-87 107-193 (344)
17 3h1q_A Ethanolamine utilizatio 98.4 5E-07 1.7E-11 75.8 6.8 77 6-85 107-183 (272)
18 2v7y_A Chaperone protein DNAK; 98.1 4.2E-07 1.4E-11 83.5 0.7 123 102-239 3-151 (509)
19 3h1q_A Ethanolamine utilizatio 98.0 3.8E-06 1.3E-10 70.4 5.0 105 102-239 29-134 (272)
20 1dkg_D Molecular chaperone DNA 98.0 1.4E-05 4.9E-10 70.2 7.4 84 2-87 147-243 (383)
21 2v7y_A Chaperone protein DNAK; 97.8 5.2E-05 1.8E-09 69.5 9.1 84 2-87 121-212 (509)
22 3qfu_A 78 kDa glucose-regulate 97.8 6.7E-05 2.3E-09 66.0 8.9 83 2-86 165-256 (394)
23 3qfu_A 78 kDa glucose-regulate 97.7 6.2E-05 2.1E-09 66.2 7.1 45 195-240 152-196 (394)
24 3i33_A Heat shock-related 70 k 97.5 0.00024 8.1E-09 62.8 8.4 83 2-86 170-264 (404)
25 3i33_A Heat shock-related 70 k 97.3 0.00022 7.4E-09 63.1 5.3 45 195-240 157-201 (404)
26 1yuw_A Heat shock cognate 71 k 97.3 0.00096 3.3E-08 61.7 9.6 83 2-86 151-243 (554)
27 2fsj_A Hypothetical protein TA 97.3 0.0008 2.7E-08 58.5 8.5 85 4-89 135-243 (346)
28 3js6_A Uncharacterized PARM pr 97.1 0.00093 3.2E-08 58.4 6.8 69 18-87 153-232 (355)
29 2zgy_A Plasmid segregation pro 97.0 0.0014 4.9E-08 56.1 7.0 76 15-91 136-217 (320)
30 2ych_A Competence protein PILM 97.0 0.0024 8.1E-08 55.8 8.4 70 11-83 157-233 (377)
31 3d2f_A Heat shock protein homo 96.8 0.0033 1.1E-07 59.5 8.0 81 3-85 151-246 (675)
32 4apw_A ALP12; actin-like prote 96.7 0.0019 6.6E-08 55.7 5.8 81 5-86 122-219 (329)
33 4a2a_A Cell division protein F 96.6 0.0042 1.4E-07 55.5 7.5 70 12-84 175-249 (419)
34 2kho_A Heat shock protein 70; 96.5 0.006 2.1E-07 57.0 7.9 83 3-87 148-243 (605)
35 2fsj_A Hypothetical protein TA 96.5 0.0012 4.2E-08 57.3 2.7 126 102-239 22-177 (346)
36 1dkg_D Molecular chaperone DNA 96.3 0.0036 1.2E-07 54.7 4.9 61 176-239 114-177 (383)
37 4gni_A Putative heat shock pro 96.1 0.028 9.7E-07 49.4 9.5 82 3-86 163-255 (409)
38 4b9q_A Chaperone protein DNAK; 94.5 0.11 3.7E-06 48.4 8.3 82 3-86 148-242 (605)
39 4gni_A Putative heat shock pro 91.4 0.17 5.9E-06 44.4 4.4 62 176-240 129-193 (409)
40 1yuw_A Heat shock cognate 71 k 89.4 0.57 2E-05 43.0 6.3 43 196-239 139-181 (554)
41 2kho_A Heat shock protein 70; 89.0 0.72 2.5E-05 42.9 6.7 44 195-239 134-177 (605)
42 3cet_A Conserved archaeal prot 87.7 0.41 1.4E-05 41.2 3.7 25 39-63 127-151 (334)
43 4b9q_A Chaperone protein DNAK; 86.5 1.1 3.6E-05 41.7 6.1 61 176-239 114-177 (605)
44 1t6c_A Exopolyphosphatase; alp 84.5 1.4 4.8E-05 37.4 5.5 41 38-80 137-177 (315)
45 3d2f_A Heat shock protein homo 83.1 0.96 3.3E-05 42.6 4.2 42 197-239 139-180 (675)
46 3cer_A Possible exopolyphospha 81.5 1.2 3.9E-05 38.5 3.8 42 39-80 146-191 (343)
47 3mdq_A Exopolyphosphatase; str 79.6 1.9 6.6E-05 36.5 4.5 40 39-80 131-170 (315)
48 2d0o_A DIOL dehydratase-reacti 77.4 2.7 9.3E-05 38.6 5.0 59 26-87 390-453 (610)
49 1nbw_A Glycerol dehydratase re 77.0 2.8 9.5E-05 38.6 4.9 56 30-87 395-455 (607)
50 1u6z_A Exopolyphosphatase; alp 69.5 6.2 0.00021 35.8 5.4 39 40-80 138-176 (513)
51 2f9w_A Pantothenate kinase; CO 60.7 14 0.00048 30.5 5.5 18 40-58 24-41 (271)
52 3hi0_A Putative exopolyphospha 59.2 17 0.00058 32.9 6.2 40 38-79 139-178 (508)
53 3aap_A Ectonucleoside triphosp 52.9 13 0.00043 32.0 4.1 36 39-74 140-177 (353)
54 1djx_A PLC-D1, phosphoinositid 51.0 9.7 0.00033 35.4 3.3 45 175-225 235-279 (624)
55 4apw_A ALP12; actin-like prote 46.4 9.3 0.00032 32.3 2.2 127 103-239 9-163 (329)
56 2zkm_X 1-phosphatidylinositol- 46.0 15 0.00051 35.3 3.8 45 175-225 385-430 (799)
57 3qr0_A Phospholipase C-beta (P 42.7 18 0.00062 34.8 3.8 45 175-225 394-438 (816)
58 3js6_A Uncharacterized PARM pr 42.3 35 0.0012 29.1 5.3 131 103-239 6-168 (355)
59 2gup_A ROK family protein; sug 36.6 79 0.0027 25.5 6.4 52 9-64 87-143 (292)
60 2ych_A Competence protein PILM 33.4 60 0.002 27.4 5.3 60 103-192 15-74 (377)
61 3d7j_A Uncharacterized protein 28.6 34 0.0012 25.5 2.6 51 168-224 65-116 (152)
62 2gel_A Putative GRAM negative 27.5 73 0.0025 25.3 4.6 84 41-129 3-94 (231)
63 2oba_A Probable 6-pyruvoyl tet 27.4 31 0.0011 25.3 2.1 50 168-224 65-114 (138)
64 1v31_A Hypothetical protein RA 27.0 61 0.0021 21.9 3.4 33 171-204 26-58 (93)
65 3djc_A Type III pantothenate k 24.9 1.4E+02 0.0047 24.3 5.9 50 41-90 4-54 (266)
66 4em8_A Ribose 5-phosphate isom 24.9 68 0.0023 23.9 3.6 32 67-112 12-43 (148)
67 1uhr_A SWI/SNF related, matrix 24.2 57 0.0019 22.1 2.8 34 171-205 26-59 (93)
68 3he8_A Ribose-5-phosphate isom 24.1 72 0.0025 23.8 3.6 30 69-112 7-36 (149)
69 3ohm_B 1-phosphatidylinositol- 24.0 44 0.0015 32.4 3.0 45 175-225 389-434 (885)
70 3jsb_A Protein L, RNA-directed 22.5 34 0.0012 26.5 1.5 43 46-88 137-179 (204)
71 2qm1_A Glucokinase; alpha-beta 20.7 2.3E+02 0.0079 22.9 6.6 53 9-64 100-159 (326)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-34 Score=261.65 Aligned_cols=141 Identities=40% Similarity=0.787 Sum_probs=124.0
Q ss_pred hheeeeccCCCccccCcCCCCCCCcccCcceeccCCCc----------------------ccccCCCccccccchhhhcc
Q psy429 101 LAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG----------------------VMVGMGQKDSYVGDEAQSKR 158 (243)
Q Consensus 101 ~~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~ 158 (243)
..+||||+||+++||||||++.|+++|||+||+++... ...+.++++.++|+++...+
T Consensus 5 ~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~~ 84 (427)
T 3dwl_A 5 NVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKA 84 (427)
T ss_dssp CSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHTH
T ss_pred CCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhCc
Confidence 36899999999999999999999999999999988541 11233455789999998777
Q ss_pred c-cccccCCCCCCcccCHHHHHHHHHHHhhccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhc
Q psy429 159 G-ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNC 237 (243)
Q Consensus 159 ~-~~~l~~p~~~G~i~d~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls 237 (243)
. .+++++|+++|+|.|||.+|++|+|+|++.|++++++||+|+|||+++++..|++++|+|||+|++|++|++.+++||
T Consensus 85 ~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla 164 (427)
T 3dwl_A 85 SAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLA 164 (427)
T ss_dssp HHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHH
T ss_pred ccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHH
Confidence 5 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q psy429 238 CTIK 241 (243)
Q Consensus 238 ~y~~ 241 (243)
+|-.
T Consensus 165 ~~a~ 168 (427)
T 3dwl_A 165 LAAS 168 (427)
T ss_dssp HHGG
T ss_pred HHhc
Confidence 9853
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-31 Score=242.11 Aligned_cols=133 Identities=29% Similarity=0.497 Sum_probs=123.5
Q ss_pred heeeeccCCCccccCcCCCCCCCcccCcceeccCCCcccccCCCccccccch-hhhccccccccCCCCCCcccCHHHHHH
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE-AQSKRGILTLKYPIEHGIVTNWDDMEK 180 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~l~~p~~~G~i~d~d~~e~ 180 (243)
.+||||+||+++||||+|++.|++++||+||+++... .+..++|++ +...+..+.+++|+++|+|.|||.+|+
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~ 97 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQE 97 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHH
T ss_pred CeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHH
Confidence 5899999999999999999999999999999987532 356789997 566778899999999999999999999
Q ss_pred HHHHHhhccccCCCCCC-ceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 181 IWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 181 l~~~~~~~~L~~~~~~~-pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
+|+|+|++.|++++.++ |+|+|||+++++..|++++|+|||+|++|++|++.+++||+|-
T Consensus 98 iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya 158 (498)
T 3qb0_A 98 QWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFA 158 (498)
T ss_dssp HHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHH
T ss_pred HHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHH
Confidence 99999988899999999 9999999999999999999999999999999999999999984
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.96 E-value=7.6e-30 Score=239.33 Aligned_cols=139 Identities=19% Similarity=0.314 Sum_probs=120.0
Q ss_pred hheeeeccCCCccccCcCCCCCCCcccCcceeccCCCccc----------------------------------------
Q psy429 101 LAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM---------------------------------------- 140 (243)
Q Consensus 101 ~~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~---------------------------------------- 140 (243)
+..||||+||+++|+|||||+.|+ .+|++||+++.....
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~-~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPA-SIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCE-EEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCC-eeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 358999999999999999999998 469999986532110
Q ss_pred ---------------------------------ccCCCccccccchhhh--ccccccccCCCCCC-----------cccC
Q psy429 141 ---------------------------------VGMGQKDSYVGDEAQS--KRGILTLKYPIEHG-----------IVTN 174 (243)
Q Consensus 141 ---------------------------------~~~~~~~~~~g~~~~~--~~~~~~l~~p~~~G-----------~i~d 174 (243)
.....+++++|+++.. .++.+.+++|+++| .+.|
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0112345789999854 46778999999999 6889
Q ss_pred HHHHHHHHHHHhhccccCCCCC---CceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 175 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 175 ~d~~e~l~~~~~~~~L~~~~~~---~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
||++|++|+|+|++.|++++++ ||+|||||+++++..||+|+|+|||+|+||++|++++++||+|-
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya 242 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYG 242 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHH
Confidence 9999999999999999998866 99999999999999999999999999999999999999999984
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.95 E-value=3.4e-29 Score=222.95 Aligned_cols=139 Identities=91% Similarity=1.394 Sum_probs=124.9
Q ss_pred heeeeccCCCccccCcCCCCCCCcccCcceeccCCCcccccCCCccccccchhhhccccccccCCCCCCcccCHHHHHHH
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 181 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~p~~~G~i~d~d~~e~l 181 (243)
.+||||+||+++|+||+|++.|+.++||++|+++......+.+.+..++|+++...++...+.+|+++|+|.|||.+|.+
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~~e~i 85 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 85 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHHHHHH
T ss_pred ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHHHHHH
Confidence 68999999999999999999999999999999876543333344678999999888888899999999999999999999
Q ss_pred HHHHhhccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 182 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 182 ~~~~~~~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
|+|+|++.|+++++++|+++|+|+++++..|++++|++||.|++|++++++++++|+|-
T Consensus 86 ~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a 144 (375)
T 2fxu_A 86 WHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA 144 (375)
T ss_dssp HHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHH
T ss_pred HHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeee
Confidence 99999888999999999999999999999999999999999999999999999999984
No 5
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.95 E-value=1.4e-29 Score=226.98 Aligned_cols=139 Identities=45% Similarity=0.835 Sum_probs=0.0
Q ss_pred heeeeccCCCccccCcCCCCCCCcccCcceeccCCCccc-c-cCCCccccccchhhhccccccccCCCCCCcccCHHHHH
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-V-GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 179 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~-~-~~~~~~~~~g~~~~~~~~~~~l~~p~~~G~i~d~d~~e 179 (243)
.+||||+||+++|+||+|++.|++++||++|+++..... . +...++.++|+++...++.+.+.+|+++|+|.|||.+|
T Consensus 7 ~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~dwd~~e 86 (394)
T 1k8k_B 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMK 86 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEecHHHHH
Confidence 579999999999999999999999999999998764322 1 22345789999998888888999999999999999999
Q ss_pred HHHHHHh-hccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 180 KIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 180 ~l~~~~~-~~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
.+|+|+| ++.|+++++++|+++|+|+++++..|++++|++||.|++|++++++++++|+|-
T Consensus 87 ~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a 148 (394)
T 1k8k_B 87 HLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA 148 (394)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHh
Confidence 9999999 889999999999999999999999999999999999999999999999999984
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.94 E-value=5e-27 Score=211.58 Aligned_cols=138 Identities=43% Similarity=0.751 Sum_probs=121.9
Q ss_pred heeeeccCCCccccCcCCCCCCCcccCcceeccCCCcc--------cccCCCccccccchhhhccccccccCCCCCCccc
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV--------MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 173 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~l~~p~~~G~i~ 173 (243)
.+||||+||+++|+||+|++.|+.++||++|+++.... ..+...+++++|+++...+ .+.+++|+++|+|.
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~-~~~~~~pi~~G~i~ 84 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIRHGIVE 84 (418)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEETTEES
T ss_pred CeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC-CCEEeccccCCEEC
Confidence 58999999999999999999999999999998875421 1112234589999997765 48899999999999
Q ss_pred CHHHHHHHHHHHhhccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 174 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 174 d~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
|||.++.+|+|+|.+.|+++++++++++|+|+++++..|+++.|++||.+++|++++++++++|+|-
T Consensus 85 d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a 151 (418)
T 1k8k_A 85 DWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAA 151 (418)
T ss_dssp CHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhh
Confidence 9999999999999888999999999999999999999999999999999999999999999999875
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.88 E-value=2.9e-23 Score=192.48 Aligned_cols=139 Identities=23% Similarity=0.378 Sum_probs=119.3
Q ss_pred hheeeeccCCCccccCcCCCCCCCcccCcceeccCCCcc----------------------------------c------
Q psy429 101 LAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV----------------------------------M------ 140 (243)
Q Consensus 101 ~~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~----------------------------------~------ 140 (243)
+..|||..||.++|+|+|.|..|. .+|++|++++.... +
T Consensus 40 ~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k~r 118 (655)
T 4am6_A 40 TATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYKRK 118 (655)
T ss_dssp GGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 468999999999999999999999 88999985431000 0
Q ss_pred ---------------------c---------cC-CCccccccchhhh-ccccccccCCCCCCccc----C-------HHH
Q psy429 141 ---------------------V---------GM-GQKDSYVGDEAQS-KRGILTLKYPIEHGIVT----N-------WDD 177 (243)
Q Consensus 141 ---------------------~---------~~-~~~~~~~g~~~~~-~~~~~~l~~p~~~G~i~----d-------~d~ 177 (243)
. +. ..++.++|+++.. .+..+.+++|+++|+|. | ||.
T Consensus 119 ~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~WD~ 198 (655)
T 4am6_A 119 VPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELISD 198 (655)
T ss_dssp CSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHHHH
T ss_pred CCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccHHH
Confidence 0 00 0136789999976 56789999999999998 8 999
Q ss_pred HHHHHHHHhhc-cccCCCC---CCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 178 MEKIWHHTFYN-ELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 178 ~e~l~~~~~~~-~L~~~~~---~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
+|.+|+|+|++ .|+++++ ++|+|+|||+++++..|++++|+|||+|++|++|++.+++||+|-
T Consensus 199 mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlya 265 (655)
T 4am6_A 199 VTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYG 265 (655)
T ss_dssp HHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHH
T ss_pred HHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHh
Confidence 99999999984 8999986 899999999999999999999999999999999999999999984
No 8
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.6e-22 Score=189.64 Aligned_cols=99 Identities=15% Similarity=0.316 Sum_probs=91.4
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 81 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~ 81 (243)
+...||+|+|+|||+|+||++++++++ +|++|++|++||||||+|++.|+|+||+||+++.++++++++||++||++|+
T Consensus 210 ~~~~re~~~eilFE~f~~pa~~~~~~~-vla~ya~G~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~ 288 (593)
T 4fo0_A 210 NKQHVKELVNMILMKMGFSGIVVHQES-VCATYGSGLSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFY 288 (593)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEEHH-HHHHHHHTCSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCeEEeechH-HHHHHHCCCCceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHH
Confidence 567899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcccc-----chhHHhhhh
Q psy429 82 KILTERGYSFT-----TTAEREIVL 101 (243)
Q Consensus 82 ~ll~~~~~~~~-----~~~~~~~v~ 101 (243)
++|.++++.+. .+.++++++
T Consensus 289 ~lL~~~~~~~~~~~~~~~~d~~~v~ 313 (593)
T 4fo0_A 289 WLMQRAGFPYRECQLTNKMDCLLLQ 313 (593)
T ss_dssp HHHHHTTCSCTTCCTTCHHHHHHHH
T ss_pred HHHHhcCCCccccccccchhHHHHH
Confidence 99999987654 345555554
No 9
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.85 E-value=3.5e-21 Score=178.55 Aligned_cols=99 Identities=17% Similarity=0.338 Sum_probs=93.8
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcC-CceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 80 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g-~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l 80 (243)
|...||+|+|++||.|++|+++++.++ ++++|++| +++|+|||+|++.|+|+||++|+++.++++++++||+++|++|
T Consensus 233 p~~~REkm~EIlFE~fgvpavyl~~qa-vlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL 311 (655)
T 4am6_A 233 KKSHVETFIRVLLTELQFQAVAIIQES-LATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLF 311 (655)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEEEHH-HHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCeeeeccHH-HHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHH
Confidence 568999999999999999999999999 99999999 7999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCc-----cccchhHHhhhh
Q psy429 81 MKILTERGY-----SFTTTAEREIVL 101 (243)
Q Consensus 81 ~~ll~~~~~-----~~~~~~~~~~v~ 101 (243)
+++|.++++ ++.++.++++++
T Consensus 312 ~kLL~~rgypy~~~~f~t~~e~eiVr 337 (655)
T 4am6_A 312 ALFLLQSDFPLQDWKIDSKHGWLLAE 337 (655)
T ss_dssp HHHHHHTTCSCCSCCTTSHHHHHHHH
T ss_pred HHHHHHcCCCccccCCCCcchHHHHH
Confidence 999999987 567777888876
No 10
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.82 E-value=1.4e-20 Score=169.88 Aligned_cols=88 Identities=43% Similarity=0.712 Sum_probs=81.0
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcC--------CceEEEEeCCCCceeEEEeecCeeccccceeecchH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 73 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g--------~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG 73 (243)
|...||+++|++||+|++|+++++.++ +|++|++| .++|+|||+|++.|+|+||++|+++.++++++++||
T Consensus 135 ~~~~re~~~ei~FE~~~~p~v~l~~~~-vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG 213 (427)
T 3dwl_A 135 PPENRENTAEIMFESFNCAGLYIAVQA-VLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAG 213 (427)
T ss_dssp CHHHHHHHHHHHTTTTCCSEEEEEEHH-HHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCH
T ss_pred CHHHHHHHHHHHHHhccCceeeecchH-HHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccH
Confidence 568999999999999999999999999 99999999 689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCcc
Q psy429 74 RDLTDYLMKILTERGYS 90 (243)
Q Consensus 74 ~~~~~~l~~ll~~~~~~ 90 (243)
+++|++|+++|.+++..
T Consensus 214 ~~lt~~L~~lL~~~~~~ 230 (427)
T 3dwl_A 214 RDVTYFVQSLLRDRNEP 230 (427)
T ss_dssp HHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 99999999999998876
No 11
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2.7e-20 Score=170.27 Aligned_cols=85 Identities=22% Similarity=0.369 Sum_probs=82.7
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 81 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~ 81 (243)
|...||+++|++||+|++|+++++.++ +|++|++|+++|+|||+|++.|+|+||++|+++.++++++++||+++|++|+
T Consensus 126 ~~~~Re~~~eilFE~f~vpav~l~~~~-vlalya~G~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~ 204 (498)
T 3qb0_A 126 STENRKKSLEVLLEGMQFEACYLAPTS-TCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIK 204 (498)
T ss_dssp CHHHHHHHHHHHHTTSCCSEEEEEEHH-HHHHHHHTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcCCCeEeecchH-HHHHHHcCCCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHH
Confidence 567899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy429 82 KILTER 87 (243)
Q Consensus 82 ~ll~~~ 87 (243)
++|.++
T Consensus 205 ~lL~~~ 210 (498)
T 3qb0_A 205 KALEPK 210 (498)
T ss_dssp HHTTTS
T ss_pred HHHHhc
Confidence 999875
No 12
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.77 E-value=2.2e-18 Score=153.09 Aligned_cols=98 Identities=85% Similarity=1.256 Sum_probs=90.8
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 81 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~ 81 (243)
+...|++++|++||.|++|++++++++ ++|+|++|..+++|||+|++.|+++||++|+++.++..++++||+++|++|.
T Consensus 112 ~~~~r~~~~e~~fe~~g~~~~~~~~e~-~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~ 190 (375)
T 2fxu_A 112 PKANREKMTQIMFETFNVPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLM 190 (375)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEEHH-HHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCcceEEEccch-heeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHH
Confidence 568999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccchhHHhhh
Q psy429 82 KILTERGYSFTTTAEREIV 100 (243)
Q Consensus 82 ~ll~~~~~~~~~~~~~~~v 100 (243)
++|.++++++.+..+.+.+
T Consensus 191 ~~l~~~~~~~~~~~~~~~~ 209 (375)
T 2fxu_A 191 KILTERGYSFVTTAEREIV 209 (375)
T ss_dssp HHHHHHTCCCCSHHHHHHH
T ss_pred HHHHhcCCCCCcHHHHHHH
Confidence 9999998887654444444
No 13
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.76 E-value=3.3e-19 Score=159.47 Aligned_cols=98 Identities=54% Similarity=0.937 Sum_probs=53.8
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 81 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~ 81 (243)
+...|++++|++||.|++|++++++++ ++|+|++|+.+|+|||+|++.|+++||++|+++.++.+++++||+++|++|.
T Consensus 116 ~~~~r~~~~e~~fe~~~~~~~~~~~~~-~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~ 194 (394)
T 1k8k_B 116 PTKNREKIVEVMFETYQFSGVYVAIQA-VLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLI 194 (394)
T ss_dssp ---------------------------------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhccCCCeEEEEhhH-HHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHH
Confidence 467899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccchhHHhhh
Q psy429 82 KILTERGYSFTTTAEREIV 100 (243)
Q Consensus 82 ~ll~~~~~~~~~~~~~~~v 100 (243)
++|.++++++.+..+.+++
T Consensus 195 ~~l~~~~~~~~~~~~~~~a 213 (394)
T 1k8k_B 195 KLLLLRGYAFNHSADFETV 213 (394)
T ss_dssp HHHHHTTCCCCTTTTHHHH
T ss_pred HHHHhcCCCCCcHHHHHHH
Confidence 9999998887644444433
No 14
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.68 E-value=1.7e-16 Score=142.73 Aligned_cols=97 Identities=39% Similarity=0.685 Sum_probs=88.2
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhh---------cCCceEEEEeCCCCceeEEEeecCeeccccceeecch
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYA---------SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 72 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~---------~g~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~g 72 (243)
+...|+++.|++||.+++|++++++++ ++|+|+ .|+ +|+|||+|++.|+++||++|+++.+++.++++|
T Consensus 119 ~~~~r~~~~e~~fe~~g~~~~~l~~ep-~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lG 196 (418)
T 1k8k_A 119 TPENREYTAEIMFESFNVPGLYIAVQA-VLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIA 196 (418)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEEEHH-HHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCS
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEechH-HHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCc
Confidence 578999999999999999999999999 999999 566 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCccccchhHHhhh
Q psy429 73 GRDLTDYLMKILTERGYSFTTTAEREIV 100 (243)
Q Consensus 73 G~~~~~~l~~ll~~~~~~~~~~~~~~~v 100 (243)
|+++|++|.++|.+++.++....+.+++
T Consensus 197 G~~lt~~l~~~l~~~~~~~~~~~~~~~~ 224 (418)
T 1k8k_A 197 GRDITYFIQQLLRDREVGIPPEQSLETA 224 (418)
T ss_dssp HHHHHHHHHHHHHTTCCCCCGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 9999999999999998876554444443
No 15
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.45 E-value=9.1e-14 Score=121.58 Aligned_cols=130 Identities=10% Similarity=0.050 Sum_probs=105.4
Q ss_pred heeeeccCCCccccCcCCCCCCCcccCcceeccCCCcccccCCCccccccchhhhcc----ccccccCCCCCCcccCHHH
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GILTLKYPIEHGIVTNWDD 177 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~l~~p~~~G~i~d~d~ 177 (243)
.+++||+||.++|+|++++. |...+||+++..++. .+..++|+++.... ....+.+|+++|.+.||+.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~ 75 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV 75 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence 57999999999999998875 777789999876431 12457899885432 2344578999999999999
Q ss_pred HHHHHHHHhhccccCC-CCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 178 MEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 178 ~e~l~~~~~~~~L~~~-~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
.+.+|.+++.+..... ..+.++++|.|+.++..+|+.+.+ ++|..+++.+.+.+.+.+|+|-
T Consensus 76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~ 138 (344)
T 1jce_A 76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIG 138 (344)
T ss_dssp HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHh
Confidence 9999999985432222 446899999999999999999999 5799999999999999998763
No 16
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.75 E-value=3.9e-08 Score=85.65 Aligned_cols=82 Identities=12% Similarity=0.230 Sum_probs=73.7
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCC-----ceEEEEeCCCCceeEEEeecCeeccccceeecchHHHH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 76 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~-----~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~ 76 (243)
++.+|+.+.+ ++|..+++.+.+..+| .++++++|. .+.+|||+|++.|+++++..|.++. ....++||+++
T Consensus 107 ~~~~r~~~~~-a~~~aG~~~~~li~ep-~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~i 182 (344)
T 1jce_A 107 TDVERRAILD-AGLEAGASKVFLIEEP-MAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEM 182 (344)
T ss_dssp CHHHHHHHHH-HHHHTTCSEEEEEEHH-HHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHH
T ss_pred CHHHHHHHHH-HHHHcCCCeEeccCCH-HHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhH
Confidence 4678888888 5799999999999999 999999986 6899999999999999999998774 46789999999
Q ss_pred HHHHHHHHhhc
Q psy429 77 TDYLMKILTER 87 (243)
Q Consensus 77 ~~~l~~ll~~~ 87 (243)
++.|.+.+.++
T Consensus 183 d~~l~~~l~~~ 193 (344)
T 1jce_A 183 DEAIVQYVRET 193 (344)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 17
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.38 E-value=5e-07 Score=75.83 Aligned_cols=77 Identities=18% Similarity=0.145 Sum_probs=69.7
Q ss_pred HHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHHHHHh
Q psy429 6 FQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 85 (243)
Q Consensus 6 r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~ll~ 85 (243)
+++..+.++|.++++...+..++ .+++++.|..+++|||+|...|.++++.+|.++. ...+++||.++++.+.+.|.
T Consensus 107 ~~~~~~~~~~~~g~~~~~i~~e~-~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~ 183 (272)
T 3h1q_A 107 NAEACGHVVAGAGLELVTLVDEP-VAAARALGINDGIVVDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYK 183 (272)
T ss_dssp CTTHHHHHHHHTTCEEEEEECHH-HHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCeeeecccHH-HHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhC
Confidence 34566778999999999999999 9999999999999999999999999999998874 47889999999999988875
No 18
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=98.12 E-value=4.2e-07 Score=83.48 Aligned_cols=123 Identities=13% Similarity=0.155 Sum_probs=86.7
Q ss_pred heeeeccCCCccccCcCCCCCCCcc--------cCcceeccCCCcccccCCCccccccchhhhcc-----cccccc----
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR-----GILTLK---- 164 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i--------~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~l~---- 164 (243)
..|.||+|+.+++++++.+..|..+ +||+++.. ....++|+++.... ....++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 4789999999999999988878766 78887762 12456888774321 112222
Q ss_pred CCCC---CCcccCHHHHHHHHHHHhhcccc------CCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhh
Q psy429 165 YPIE---HGIVTNWDDMEKIWHHTFYNELR------VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 235 (243)
Q Consensus 165 ~p~~---~G~i~d~d~~e~l~~~~~~~~L~------~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ 235 (243)
+|++ +|. +|+ .+.+|.+++. +|. .......+++|.|..++..+|+.+.+. ++..+++.+.+.+.+.
T Consensus 73 ~p~~~~~~g~--~~~-~~ei~a~~L~-~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~ 147 (509)
T 2v7y_A 73 TDYKVEIEGK--QYT-PQEISAIILQ-YLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPT 147 (509)
T ss_dssp SCCCEEETTE--EEC-HHHHHHHHHH-HHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHH
T ss_pred CCcEEEECCE--EEc-HHHHHHHHHH-HHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHH
Confidence 2666 664 343 4455555542 221 123457899999999999999999885 6999999999999999
Q ss_pred hccc
Q psy429 236 NCCT 239 (243)
Q Consensus 236 ls~y 239 (243)
+|++
T Consensus 148 AAAl 151 (509)
T 2v7y_A 148 AAAL 151 (509)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 19
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.04 E-value=3.8e-06 Score=70.42 Aligned_cols=105 Identities=13% Similarity=0.057 Sum_probs=71.7
Q ss_pred heeeeccCCCccccCcCCCCCCCcccCcceeccCCCcccccCCCccccccchhhhccccccccCCCCCCcccCHHHHHHH
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 181 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~p~~~G~i~d~d~~e~l 181 (243)
..++||+||.++|+....++. + .++.. ..-..|+++|.+.||+.++.+
T Consensus 29 ~~~gIDiGS~s~k~vi~~~~~-~-----~l~~~--------------------------~~~~~~l~~g~i~d~~~~~~~ 76 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQEG-I-----PVAGA--------------------------LKWASVVKDGLVVDYIGAIQI 76 (272)
T ss_dssp CEEEEECCSSEEEEEEECTTC-C-----EEEEE--------------------------EEECCCCBTTBCTTHHHHHHH
T ss_pred EEEEEEcccceEEEEEECCCC-c-----EEEEE--------------------------eecccccCCCEEEcHHHHHHH
Confidence 368999999999998732211 1 11110 012358899999999999999
Q ss_pred HHHHhhccccC-CCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhccc
Q psy429 182 WHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCT 239 (243)
Q Consensus 182 ~~~~~~~~L~~-~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y 239 (243)
|++++...... ......++++.|.......|+ ..+.++|.++++...+..++.++++
T Consensus 77 l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~ 134 (272)
T 3h1q_A 77 VRELKAKVERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAAR 134 (272)
T ss_dssp HHHHHHHHHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHH
Confidence 99998643322 223356677777766655555 5666899999999999998888765
No 20
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=97.96 E-value=1.4e-05 Score=70.22 Aligned_cols=84 Identities=18% Similarity=0.043 Sum_probs=67.2
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCc------eEEEEeCCCCceeEEEeecC------eeccc-ccee
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEG------YALPH-AILR 68 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~------~~lVvd~G~~~t~v~pv~~g------~~~~~-~~~~ 68 (243)
++.+|+.+.+. +|..+++.+.+..+| .+++++++.. +.+|+|+|...|+++.+..+ ..... ....
T Consensus 147 ~~~~r~~~~~a-~~~aGl~~~~li~Ep-~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~ 224 (383)
T 1dkg_D 147 NDAQRQATKDA-GRIAGLEVKRIINEP-TAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGD 224 (383)
T ss_dssp CHHHHHHHHHH-HHHTTCEESCCCBHH-HHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEE
T ss_pred CHHHHHHHHHH-HHHcCCceEEEeccH-HHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCC
Confidence 46788888876 699999999999999 9999988753 78999999999999966543 22111 2345
Q ss_pred ecchHHHHHHHHHHHHhhc
Q psy429 69 LDLAGRDLTDYLMKILTER 87 (243)
Q Consensus 69 ~~~gG~~~~~~l~~ll~~~ 87 (243)
.++||+++++.|.+++.++
T Consensus 225 ~~lGG~~id~~l~~~l~~~ 243 (383)
T 1dkg_D 225 THLGGEDFDSRLINYLVEE 243 (383)
T ss_dssp SSCSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 7999999999999988665
No 21
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=97.84 E-value=5.2e-05 Score=69.54 Aligned_cols=84 Identities=15% Similarity=0.120 Sum_probs=68.5
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCC-----ceEEEEeCCCCceeEEEee--cCee-ccccceeecchH
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAG 73 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~-----~~~lVvd~G~~~t~v~pv~--~g~~-~~~~~~~~~~gG 73 (243)
++.+|+.+.+. ++..+++.+.++.+| .++++++|. .+.+|+|+|++.|+++.+- +|.. +.......++||
T Consensus 121 ~~~qr~a~~~a-~~~AGl~~~~li~Ep-~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG 198 (509)
T 2v7y_A 121 NDAQRQATKDA-GRIAGLEVERIINEP-TAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGG 198 (509)
T ss_dssp CHHHHHHHHHH-HHHTTCEEEEEEEHH-HHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSH
T ss_pred CHHHHHHHHHH-HHHcCCCeEEEecCH-HHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCH
Confidence 36788888885 699999999999999 999999986 4899999999999999665 3533 223345579999
Q ss_pred HHHHHHHHHHHhhc
Q psy429 74 RDLTDYLMKILTER 87 (243)
Q Consensus 74 ~~~~~~l~~ll~~~ 87 (243)
+++++.|.+.+.++
T Consensus 199 ~d~d~~l~~~l~~~ 212 (509)
T 2v7y_A 199 DDFDQVIIDYLVNQ 212 (509)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888654
No 22
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.80 E-value=6.7e-05 Score=65.98 Aligned_cols=83 Identities=17% Similarity=0.109 Sum_probs=64.4
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCc------eEEEEeCCCCceeEEEee--cCeecccc-ceeecch
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRT------TGIVLDSGDGVSHTVPIY--EGYALPHA-ILRLDLA 72 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~------~~lVvd~G~~~t~v~pv~--~g~~~~~~-~~~~~~g 72 (243)
++.+|+.+.+.+ +..+++.+.++.+| .++++++|.. +.+|+|+|.+.|+++.+- ++..-..+ ....++|
T Consensus 165 ~~~~r~~~~~a~-~~aGl~~~~li~Ep-~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lG 242 (394)
T 3qfu_A 165 NDAQRQATKDAG-TIAGLNVLRIVNEP-TAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLG 242 (394)
T ss_dssp CHHHHHHHHHHH-HHTTCEEEEEEEHH-HHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCS
T ss_pred CHHHHHHHHHHH-HHcCCceEEEecCH-HHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCC
Confidence 356788777665 99999999999999 9999998753 459999999999877553 44332222 3447999
Q ss_pred HHHHHHHHHHHHhh
Q psy429 73 GRDLTDYLMKILTE 86 (243)
Q Consensus 73 G~~~~~~l~~ll~~ 86 (243)
|+++++.|.+.+.+
T Consensus 243 G~~~d~~l~~~l~~ 256 (394)
T 3qfu_A 243 GEDFDYKIVRQLIK 256 (394)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 99999999988853
No 23
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.71 E-value=6.2e-05 Score=66.22 Aligned_cols=45 Identities=7% Similarity=0.021 Sum_probs=39.7
Q ss_pred CCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 195 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 195 ~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
.-..+++|.|..++..+|+.+.+.+ +..+++.+.+.+.+.++++-
T Consensus 152 ~~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~ 196 (394)
T 3qfu_A 152 KVTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIA 196 (394)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHH
T ss_pred CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHH
Confidence 4568999999999999999888876 99999999999999998753
No 24
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=97.54 E-value=0.00024 Score=62.82 Aligned_cols=83 Identities=14% Similarity=0.157 Sum_probs=64.6
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCc---------eEEEEeCCCCceeEEEee--cCee-ccccceee
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRT---------TGIVLDSGDGVSHTVPIY--EGYA-LPHAILRL 69 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~---------~~lVvd~G~~~t~v~pv~--~g~~-~~~~~~~~ 69 (243)
++.+|+.+.+. ++..+++.+.++++| .+++++++.. +.+|+|+|...|+++-+- +|.. +.......
T Consensus 170 ~~~~r~~~~~a-~~~AGl~~~~li~Ep-~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~ 247 (404)
T 3i33_A 170 NDSQRQATKDA-GTITGLNVLRIINEP-TAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 247 (404)
T ss_dssp CHHHHHHHHHH-HHHHTCEEEEEEEHH-HHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEET
T ss_pred CHHHHHHHHHH-HHHcCCCeEEEeccH-HHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCC
Confidence 35678777665 899999999999999 9999988753 349999999999997653 3322 22234458
Q ss_pred cchHHHHHHHHHHHHhh
Q psy429 70 DLAGRDLTDYLMKILTE 86 (243)
Q Consensus 70 ~~gG~~~~~~l~~ll~~ 86 (243)
++||+++++.|.+.+.+
T Consensus 248 ~lGG~~~d~~l~~~l~~ 264 (404)
T 3i33_A 248 HLGGEDFDNRMVSHLAE 264 (404)
T ss_dssp TCSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999988843
No 25
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=97.31 E-value=0.00022 Score=63.06 Aligned_cols=45 Identities=7% Similarity=0.058 Sum_probs=39.4
Q ss_pred CCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 195 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 195 ~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
.-..+++|.|..++..+|+.+.+. ++..+++.+.+.+.+.+|++-
T Consensus 157 ~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~ 201 (404)
T 3i33_A 157 KVHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIA 201 (404)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHH
Confidence 346899999999999999988776 889999999999999988763
No 26
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=97.29 E-value=0.00096 Score=61.75 Aligned_cols=83 Identities=12% Similarity=0.121 Sum_probs=66.1
Q ss_pred chHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCC-------ceEEEEeCCCCceeEEEee--cCee-ccccceeecc
Q psy429 2 VGTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDL 71 (243)
Q Consensus 2 ~~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~-------~~~lVvd~G~~~t~v~pv~--~g~~-~~~~~~~~~~ 71 (243)
.+.+|+.+.+ .++..|++.+.++..| .++++++|. .+.+|+|+|.+.++++-+- +|.. +........+
T Consensus 151 ~~~qr~a~~~-A~~~AGl~~~~li~EP-~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~l 228 (554)
T 1yuw_A 151 NDSQRQATKD-AGTIAGLNVLRIINEP-TAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHL 228 (554)
T ss_dssp CHHHHHHHHH-HHHTTTCEEEEEEEHH-HHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTC
T ss_pred CHHHHHHHHH-HHHHcCCCeEEEeCcH-HHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCC
Confidence 3567777766 6788999999999999 999998873 5789999999999998665 5643 2334455799
Q ss_pred hHHHHHHHHHHHHhh
Q psy429 72 AGRDLTDYLMKILTE 86 (243)
Q Consensus 72 gG~~~~~~l~~ll~~ 86 (243)
||+++++.|.+.+..
T Consensus 229 GG~d~d~~l~~~l~~ 243 (554)
T 1yuw_A 229 GGEDFDNRMVNHFIA 243 (554)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999888753
No 27
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=97.29 E-value=0.0008 Score=58.54 Aligned_cols=85 Identities=15% Similarity=0.226 Sum_probs=64.6
Q ss_pred HHHHHHHHHhhhh-------------cCCCeEEEecchhHHHHhhc--C----C--ceEEEEeCCCCceeEEEee--cCe
Q psy429 4 TTFQGVVRIMFET-------------FNTPAMYVAIQAAVLSLYAS--G----R--TTGIVLDSGDGVSHTVPIY--EGY 60 (243)
Q Consensus 4 ~~r~~~~e~~FE~-------------~~~~~~~~~~~~~~~~~~~~--g----~--~~~lVvd~G~~~t~v~pv~--~g~ 60 (243)
.+|+.+-+.+... +++..+.+.++| .+|+++. + . .+.+|||+|...|.+.-+- +|.
T Consensus 135 ~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep-~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~ 213 (346)
T 2fsj_A 135 LEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG-VGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME 213 (346)
T ss_dssp HHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT-HHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE
T ss_pred HHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH-HHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE
Confidence 4566666664442 235679999999 9988874 3 1 3459999999999999887 787
Q ss_pred eccccceeecchHHHHHHHHHHHHhhc-Cc
Q psy429 61 ALPHAILRLDLAGRDLTDYLMKILTER-GY 89 (243)
Q Consensus 61 ~~~~~~~~~~~gG~~~~~~l~~ll~~~-~~ 89 (243)
+.......+++||+++++.+.+.+..+ +.
T Consensus 214 ~v~~~s~~~~lGg~~i~~~I~~~i~~~~g~ 243 (346)
T 2fsj_A 214 PVVELSFSLQIGVGDAISALSRKIAKETGF 243 (346)
T ss_dssp ECGGGCEEESCCHHHHHHHHHHHHHHHHCC
T ss_pred EEeecCCCcchhHHHHHHHHHHHHHHHhCC
Confidence 666556888999999999999888654 44
No 28
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=97.08 E-value=0.00093 Score=58.41 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=59.7
Q ss_pred CCCeEEEecchhHHHHhhcC-----------CceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHHHHHhh
Q psy429 18 NTPAMYVAIQAAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 86 (243)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~g-----------~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~ll~~ 86 (243)
.+..+.+.+++ ..|+++.+ ....+|||+|+..|.++-+.+|.+.......+++||..+++.+.+.+.+
T Consensus 153 ~I~~V~v~pE~-~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~ 231 (355)
T 3js6_A 153 NVKGVKIVAQP-MGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSK 231 (355)
T ss_dssp EEEEEEEEEHH-HHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC-
T ss_pred EEEEEEEEeCc-HHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHH
Confidence 34789999999 99999875 3467899999999999999888898888889999999999999999987
Q ss_pred c
Q psy429 87 R 87 (243)
Q Consensus 87 ~ 87 (243)
+
T Consensus 232 ~ 232 (355)
T 3js6_A 232 K 232 (355)
T ss_dssp -
T ss_pred h
Confidence 6
No 29
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=96.98 E-value=0.0014 Score=56.11 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=61.3
Q ss_pred hhcCCCeEEEecchhHHHHhhcC-----CceEEEEeCCCCceeEEEeecCee-ccccceeecchHHHHHHHHHHHHhhcC
Q psy429 15 ETFNTPAMYVAIQAAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDYLMKILTERG 88 (243)
Q Consensus 15 E~~~~~~~~~~~~~~~~~~~~~g-----~~~~lVvd~G~~~t~v~pv~~g~~-~~~~~~~~~~gG~~~~~~l~~ll~~~~ 88 (243)
+.+++..+.+.+++ .+++++.+ ....+|||+|+..|.++-+.+|.+ +.......++||.++++.+.+.+.+++
T Consensus 136 ~~~~i~~v~~~~e~-~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~ 214 (320)
T 2zgy_A 136 DTFTIKDVKVMPES-IPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 214 (320)
T ss_dssp CCCEEEEEEEEESS-HHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCS
T ss_pred cEEEEEEEEEecCc-HHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcC
Confidence 45566789999999 98888764 357899999999999999988876 444567789999999999999997654
Q ss_pred ccc
Q psy429 89 YSF 91 (243)
Q Consensus 89 ~~~ 91 (243)
.++
T Consensus 215 ~~i 217 (320)
T 2zgy_A 215 TKG 217 (320)
T ss_dssp BGG
T ss_pred CCC
Confidence 443
No 30
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=96.97 E-value=0.0024 Score=55.78 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=59.2
Q ss_pred HHhhhhcCCCeEEEecchhHHHHhhcC------C-ceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHHHH
Q psy429 11 RIMFETFNTPAMYVAIQAAVLSLYASG------R-TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 83 (243)
Q Consensus 11 e~~FE~~~~~~~~~~~~~~~~~~~~~g------~-~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~l 83 (243)
.-++|..++.-..+..++ .+++.++| . ...+|||+|+..|+++.+.+|.+.. ...+++||+++++.+.+.
T Consensus 157 ~~~~~~aGl~~~~i~~ep-~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~ 233 (377)
T 2ych_A 157 LEALRGAGLVPVVLDVKP-FAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARS 233 (377)
T ss_dssp HHHHHHTTCEEEEEEEHH-HHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHH
T ss_pred HHHHHHCCCceEEEecch-HHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHH
Confidence 335688999999999999 99888764 2 3469999999999999999998864 477899999999998874
No 31
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=96.75 E-value=0.0033 Score=59.51 Aligned_cols=81 Identities=9% Similarity=0.032 Sum_probs=63.5
Q ss_pred hHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCC------------ceEEEEeCCCCceeEEEee--cCee-ccccce
Q psy429 3 GTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGR------------TTGIVLDSGDGVSHTVPIY--EGYA-LPHAIL 67 (243)
Q Consensus 3 ~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~------------~~~lVvd~G~~~t~v~pv~--~g~~-~~~~~~ 67 (243)
+.+|+.+.+ ..+..|++.+.+++.| .++++++|. .+.+|+|+|++.+.++-+- +|.. +.....
T Consensus 151 ~~qR~a~~~-Aa~~AGl~~~~li~EP-~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~g 228 (675)
T 3d2f_A 151 EEQRYNIAD-AARIAGLNPVRIVNDV-TAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTAC 228 (675)
T ss_dssp HHHHHHHHH-HHHHTTCEEEEEEEHH-HHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHH-HHHHcCCceEEEEcch-HHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcC
Confidence 567777666 5578899999999999 999887652 4689999999999998664 5654 233334
Q ss_pred eecchHHHHHHHHHHHHh
Q psy429 68 RLDLAGRDLTDYLMKILT 85 (243)
Q Consensus 68 ~~~~gG~~~~~~l~~ll~ 85 (243)
-..+||+++++.|.+.+.
T Consensus 229 d~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 229 DKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp ETTCSHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHH
Confidence 578999999999998885
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=96.72 E-value=0.0019 Score=55.69 Aligned_cols=81 Identities=12% Similarity=0.030 Sum_probs=65.8
Q ss_pred HHHHHHHHhhhh-------------cCCCeEEEecchhHHHHhhcC----CceEEEEeCCCCceeEEEeecCeeccccce
Q psy429 5 TFQGVVRIMFET-------------FNTPAMYVAIQAAVLSLYASG----RTTGIVLDSGDGVSHTVPIYEGYALPHAIL 67 (243)
Q Consensus 5 ~r~~~~e~~FE~-------------~~~~~~~~~~~~~~~~~~~~g----~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~ 67 (243)
+|+++.+.+-.. +++..+.+.+++ ..+++... ..+.+|||+|+..|.+.-+.+|.+......
T Consensus 122 ~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~-~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~ 200 (329)
T 4apw_A 122 AKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEG-SGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERF 200 (329)
T ss_dssp TTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHH-HHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCE
T ss_pred HHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEecc-HHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeecccc
Confidence 456666665532 234678999999 98888762 357799999999999999999999877778
Q ss_pred eecchHHHHHHHHHHHHhh
Q psy429 68 RLDLAGRDLTDYLMKILTE 86 (243)
Q Consensus 68 ~~~~gG~~~~~~l~~ll~~ 86 (243)
.+++||+++++.+.+.+..
T Consensus 201 ~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 201 IEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EESCCHHHHHHHHHTSSSS
T ss_pred chhhHHHHHHHHHHHHHHh
Confidence 8999999999999988876
No 33
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=96.65 E-value=0.0042 Score=55.47 Aligned_cols=70 Identities=7% Similarity=0.052 Sum_probs=60.2
Q ss_pred HhhhhcCCCeEEEecchhHHHHhhcCC-----ceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHHHHH
Q psy429 12 IMFETFNTPAMYVAIQAAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 84 (243)
Q Consensus 12 ~~FE~~~~~~~~~~~~~~~~~~~~~g~-----~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~ll 84 (243)
-++|.-+..-..+..+| .+++++... ...+|||+|+..|+++-+.+|.+... ..+++||+++|+.+.+.|
T Consensus 175 ~~~~~AGL~v~~lv~ep-~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~dIa~~l 249 (419)
T 4a2a_A 175 NFLQDTVKSPFQLKSSL-VSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIKDVSAVL 249 (419)
T ss_dssp HHHHTTSCSCEEEEEHH-HHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEEEHH-HHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHHHHHHHH
Confidence 35788899989999999 999988765 36899999999999999999988754 678999999999998765
No 34
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=96.51 E-value=0.006 Score=56.99 Aligned_cols=83 Identities=19% Similarity=0.093 Sum_probs=63.7
Q ss_pred hHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCC------ceEEEEeCCCCceeEEEee------cCee-ccccceee
Q psy429 3 GTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGR------TTGIVLDSGDGVSHTVPIY------EGYA-LPHAILRL 69 (243)
Q Consensus 3 ~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~------~~~lVvd~G~~~t~v~pv~------~g~~-~~~~~~~~ 69 (243)
+.+|+.+.+. .+..|+..+.++..| .+|++++|. .+.+|+|+|.+.++++-+- +|.. +.......
T Consensus 148 d~qr~a~~~A-~~~AGl~v~~li~EP-~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~ 225 (605)
T 2kho_A 148 DAQRQATKDA-GRIAGLEVKRIINEP-TAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDT 225 (605)
T ss_dssp HHHHHHHHHH-HHTTTCEEEEEEEHH-HHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEES
T ss_pred HHHHHHHHHH-HHHcCCceEEEecCH-HHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCC
Confidence 5677776665 577899999999999 999998874 3589999999999998765 3432 12233446
Q ss_pred cchHHHHHHHHHHHHhhc
Q psy429 70 DLAGRDLTDYLMKILTER 87 (243)
Q Consensus 70 ~~gG~~~~~~l~~ll~~~ 87 (243)
++||+++++.|.+.+.++
T Consensus 226 ~lGG~d~D~~l~~~l~~~ 243 (605)
T 2kho_A 226 HLGGEDFDSRLINYLVEE 243 (605)
T ss_dssp SCSGGGTHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHH
Confidence 899999999998887653
No 35
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=96.45 E-value=0.0012 Score=57.35 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=83.1
Q ss_pred heeeeccCCCccccCcCCCCCCCcccCcceeccCCCccccc--------C------CCccccccchhhhccccccccCCC
Q psy429 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--------M------GQKDSYVGDEAQSKRGILTLKYPI 167 (243)
Q Consensus 102 ~~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~~~--------~------~~~~~~~g~~~~~~~~~~~l~~p~ 167 (243)
..+-||+|+.++|+-. ++ .-...+||+++.........+ . ..+.+.+|+++. +|+
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l 90 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQ 90 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCS
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------ccc
Confidence 4689999999999853 22 224568999887543210000 0 123566776654 789
Q ss_pred CCCcccCHHHHHHHHHHHhhccc-cCCCCCCceE--eecCCCCChhHHHHHHHHhhhc-------------CCCCeEEee
Q psy429 168 EHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVL--LTEAPLNPKANREKMTQIMFET-------------FNTPAMYVA 231 (243)
Q Consensus 168 ~~G~i~d~d~~e~l~~~~~~~~L-~~~~~~~pvl--ltep~~~~~~~re~~~eilFE~-------------~~vpav~~~ 231 (243)
.+|.+.| +..+.++.+.+.+.. .....+..++ ++.|......+|+.+.+.+... +++..+.+.
T Consensus 91 ~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 9999999 878888887775432 1112345688 9999888777888888875553 235668888
Q ss_pred ehhhhccc
Q psy429 232 IQAVNCCT 239 (243)
Q Consensus 232 ~~~~ls~y 239 (243)
+++..|++
T Consensus 170 ~Ep~AAa~ 177 (346)
T 2fsj_A 170 PQGVGAAL 177 (346)
T ss_dssp ETTHHHHH
T ss_pred ccHHHHHH
Confidence 98887665
No 36
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.32 E-value=0.0036 Score=54.75 Aligned_cols=61 Identities=7% Similarity=-0.035 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhh---ccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhccc
Q psy429 176 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCT 239 (243)
Q Consensus 176 d~~e~l~~~~~~---~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y 239 (243)
+....+++++.. ..++ .....++++.|..++..+|+.+.+. +|..+++.+.+.+.+.++++
T Consensus 114 ~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~ 177 (383)
T 1dkg_D 114 QISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAAL 177 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHH
Confidence 344555555532 2233 2346799999999999999999886 68899999999999988875
No 37
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=96.07 E-value=0.028 Score=49.45 Aligned_cols=82 Identities=11% Similarity=0.141 Sum_probs=60.7
Q ss_pred hHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCCc--------eEEEEeCCCCceeEEEe--ecCee-ccccceeecc
Q psy429 3 GTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGRT--------TGIVLDSGDGVSHTVPI--YEGYA-LPHAILRLDL 71 (243)
Q Consensus 3 ~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~~--------~~lVvd~G~~~t~v~pv--~~g~~-~~~~~~~~~~ 71 (243)
+.+|+.+.+ ..+.-++..+.++..| .+++++++.. ..+|+|+|.+.|.++-+ -+|.. +.......++
T Consensus 163 ~~~r~~~~~-a~~~AGl~~~~li~Ep-~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~l 240 (409)
T 4gni_A 163 EKQKAALIA-AAAAADLEVLQLISEP-AAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEY 240 (409)
T ss_dssp HHHHHHHHH-HHHHTTCEEEEEEEHH-HHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSS
T ss_pred HHHHHHHHH-HHHHcCCCeEEEEcCH-HHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCc
Confidence 455655444 5677799999999999 9999998854 59999999999998764 33321 1112234799
Q ss_pred hHHHHHHHHHHHHhh
Q psy429 72 AGRDLTDYLMKILTE 86 (243)
Q Consensus 72 gG~~~~~~l~~ll~~ 86 (243)
||.++++.|.+.+..
T Consensus 241 GG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 241 HGIALDKVLIDHFSK 255 (409)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999988864
No 38
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=94.51 E-value=0.11 Score=48.42 Aligned_cols=82 Identities=18% Similarity=0.084 Sum_probs=60.4
Q ss_pred hHHHHHHHHHhhhhcCCCeEEEecchhHHHHhhcCC------ceEEEEeCCCCceeEEEeecCe-----e--ccccceee
Q psy429 3 GTTFQGVVRIMFETFNTPAMYVAIQAAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEGY-----A--LPHAILRL 69 (243)
Q Consensus 3 ~~~r~~~~e~~FE~~~~~~~~~~~~~~~~~~~~~g~------~~~lVvd~G~~~t~v~pv~~g~-----~--~~~~~~~~ 69 (243)
+.+|+.+ .-..+.-|++.+.++..| .++++++|. .+-+|+|+|.+.+.++-+--+. . ......-.
T Consensus 148 ~~qr~a~-~~Aa~~AGl~v~~li~EP-~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~ 225 (605)
T 4b9q_A 148 DAQRQAT-KDAGRIAGLEVKRIINEP-TAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDT 225 (605)
T ss_dssp HHHHHHH-HHHHHHTTCEEEEEEEHH-HHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEET
T ss_pred HHHHHHH-HHHHHHcCCceEEEeCcH-HHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCC
Confidence 4566554 445677899999999999 999988863 4679999999999998664332 1 11123346
Q ss_pred cchHHHHHHHHHHHHhh
Q psy429 70 DLAGRDLTDYLMKILTE 86 (243)
Q Consensus 70 ~~gG~~~~~~l~~ll~~ 86 (243)
.+||.++++.|.+.+..
T Consensus 226 ~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 226 HLGGEDFDSRLINYLVE 242 (605)
T ss_dssp TCSHHHHHHHHHHHHHH
T ss_pred CcChHHHHHHHHHHHHH
Confidence 78999999999888764
No 39
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=91.41 E-value=0.17 Score=44.36 Aligned_cols=62 Identities=3% Similarity=-0.017 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhh---ccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhcccc
Q psy429 176 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCTI 240 (243)
Q Consensus 176 d~~e~l~~~~~~---~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y~ 240 (243)
+....+++++.. ..++ .....++++-|......+|+.+.+. .+.-++..+.+...+..+++-
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~ 193 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLA 193 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHH
Confidence 344555555542 2233 3456799999999999888876665 566788889999988887653
No 40
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=89.44 E-value=0.57 Score=43.03 Aligned_cols=43 Identities=5% Similarity=-0.009 Sum_probs=37.4
Q ss_pred CCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhccc
Q psy429 196 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCT 239 (243)
Q Consensus 196 ~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y 239 (243)
-..+++|.|..++..+|+.+.+ +++..|++.+.+.+.+..|++
T Consensus 139 v~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAl 181 (554)
T 1yuw_A 139 VTNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAI 181 (554)
T ss_dssp CCEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHH
T ss_pred CCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHH
Confidence 3579999999999999998887 668899999999999888765
No 41
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=89.03 E-value=0.72 Score=42.86 Aligned_cols=44 Identities=7% Similarity=-0.023 Sum_probs=36.7
Q ss_pred CCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhccc
Q psy429 195 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCT 239 (243)
Q Consensus 195 ~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y 239 (243)
.-..+++|.|......+|+.+.+. .+.-|+..+.+.+.+..|++
T Consensus 134 ~v~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAl 177 (605)
T 2kho_A 134 PVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAAL 177 (605)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHH
T ss_pred CCcEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHH
Confidence 345789999999999999888776 57789999999999888764
No 42
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=87.71 E-value=0.41 Score=41.15 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=23.7
Q ss_pred ceEEEEeCCCCceeEEEeecCeecc
Q psy429 39 TTGIVLDSGDGVSHTVPIYEGYALP 63 (243)
Q Consensus 39 ~~~lVvd~G~~~t~v~pv~~g~~~~ 63 (243)
.++++||+|...|.++|+.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 6799999999999999999999986
No 43
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=86.49 E-value=1.1 Score=41.74 Aligned_cols=61 Identities=7% Similarity=-0.042 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhh---ccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhccc
Q psy429 176 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCT 239 (243)
Q Consensus 176 d~~e~l~~~~~~---~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y 239 (243)
+....++.++.. ..++. .-..+++|.|..++..+|+.+.+ +.+.-|++.+.+.+.+..|++
T Consensus 114 ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr~a~~~-Aa~~AGl~v~~li~EP~AAAl 177 (605)
T 4b9q_A 114 QISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQRQATKD-AGRIAGLEVKRIINEPTAAAL 177 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHHHH-HHHHcCCceEEEeCcHHHHHH
Confidence 334445555432 23433 34578999999999999987655 466789999999999888764
No 44
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=84.47 E-value=1.4 Score=37.42 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=34.6
Q ss_pred CceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHH
Q psy429 38 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 80 (243)
Q Consensus 38 ~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l 80 (243)
..+++|||+|..+|.++-.-+|.+. ....+++|+-.+++.+
T Consensus 137 ~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLTETF 177 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHHHHHh
Confidence 5679999999999999988778764 3577999999888876
No 45
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=83.14 E-value=0.96 Score=42.64 Aligned_cols=42 Identities=7% Similarity=0.077 Sum_probs=36.3
Q ss_pred CceEeecCCCCChhHHHHHHHHhhhcCCCCeEEeeehhhhccc
Q psy429 197 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVNCCT 239 (243)
Q Consensus 197 ~pvlltep~~~~~~~re~~~eilFE~~~vpav~~~~~~~ls~y 239 (243)
..+++|.|...+..+|+.+.+ +.+..|++.+.+.+.+..+++
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAl 180 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIAD-AARIAGLNPVRIVNDVTAAGV 180 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHH
T ss_pred ceEEEEECCCCCHHHHHHHHH-HHHHcCCceEEEEcchHHHHH
Confidence 578999999999999998887 557789999999999888764
No 46
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=81.53 E-value=1.2 Score=38.47 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=32.8
Q ss_pred ceEEEEeCCCCceeEEEeec--Ceec--cccceeecchHHHHHHHH
Q psy429 39 TTGIVLDSGDGVSHTVPIYE--GYAL--PHAILRLDLAGRDLTDYL 80 (243)
Q Consensus 39 ~~~lVvd~G~~~t~v~pv~~--g~~~--~~~~~~~~~gG~~~~~~l 80 (243)
.+++|||+|..+|.++-..+ +.+. ......+++|+..+++.+
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHT
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHh
Confidence 56999999999999987766 4331 124678999999888876
No 47
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=79.56 E-value=1.9 Score=36.55 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=33.3
Q ss_pred ceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHH
Q psy429 39 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 80 (243)
Q Consensus 39 ~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l 80 (243)
.+++|+|+|..+|.++-.-+|.+.. ...+++|.-.+++.+
T Consensus 131 ~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQRLIDRF 170 (315)
T ss_dssp CCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHHHHHHS
T ss_pred CCEEEEEeCCCceEEEEEECCeEee--eEEEechhhHHHHHh
Confidence 5799999999999999998886654 578899998777654
No 48
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=77.43 E-value=2.7 Score=38.58 Aligned_cols=59 Identities=19% Similarity=0.115 Sum_probs=45.3
Q ss_pred cchhHHHHhhcC----C-ceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHHHHHhhc
Q psy429 26 IQAAVLSLYASG----R-TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 87 (243)
Q Consensus 26 ~~~~~~~~~~~g----~-~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~ll~~~ 87 (243)
-++ .+|.++.= + .-..+||+|...|++.=+.+|..+.. ..++.||+++|+.+..-|.-.
T Consensus 390 ~ep-~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a--~~ip~gG~~VT~DIA~~Lgt~ 453 (610)
T 2d0o_A 390 AEA-EAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIA--THLAGAGDMVTMIIARELGLE 453 (610)
T ss_dssp EHH-HHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEE--EEEECSHHHHHHHHHHHHTCC
T ss_pred ccH-HHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCCC
Confidence 344 55555442 2 46789999999999998888877654 678999999999998877643
No 49
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=76.95 E-value=2.8 Score=38.58 Aligned_cols=56 Identities=14% Similarity=0.120 Sum_probs=43.6
Q ss_pred HHHHhhcC----C-ceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHHHHHhhc
Q psy429 30 VLSLYASG----R-TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 87 (243)
Q Consensus 30 ~~~~~~~g----~-~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~ll~~~ 87 (243)
.+|.++.= + .-..+||+|...|++.=+.+|..+.. ..++.||+++|+.+..-|.-.
T Consensus 395 ~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a--~~ip~gG~~VT~DIA~~Lg~~ 455 (607)
T 1nbw_A 395 NMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITA--VHLAGAGNMVSLLIKTELGLE 455 (607)
T ss_dssp HHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEE--EEEECCHHHHHHHHHHHHTCS
T ss_pred HHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCCC
Confidence 55555442 2 46789999999999998888877654 678999999999998877643
No 50
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=69.48 E-value=6.2 Score=35.78 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=32.3
Q ss_pred eEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHH
Q psy429 40 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 80 (243)
Q Consensus 40 ~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l 80 (243)
.++|||+|.++|.++-.-+|.+. ....+++|.-.+++.+
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLY 176 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHHHHHH
Confidence 79999999999999977777664 3567899998887765
No 51
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=60.67 E-value=14 Score=30.53 Aligned_cols=18 Identities=22% Similarity=0.298 Sum_probs=13.9
Q ss_pred eEEEEeCCCCceeEEEeec
Q psy429 40 TGIVLDSGDGVSHTVPIYE 58 (243)
Q Consensus 40 ~~lVvd~G~~~t~v~pv~~ 58 (243)
--|+||+|.+.+.. .++|
T Consensus 24 M~L~IDiGNT~ik~-g~~~ 41 (271)
T 2f9w_A 24 MILELDCGNSLIKW-RVIE 41 (271)
T ss_dssp EEEEEEECSSCEEE-EEEE
T ss_pred cEEEEEeCCCeeEE-EEEe
Confidence 35999999998887 4455
No 52
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=59.20 E-value=17 Score=32.86 Aligned_cols=40 Identities=25% Similarity=0.301 Sum_probs=33.1
Q ss_pred CceEEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHH
Q psy429 38 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 79 (243)
Q Consensus 38 ~~~~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~ 79 (243)
...++|||+|.++|.++-.-+|.+.. ...+++|.-.+++.
T Consensus 139 ~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 139 QPDGIAGDLGGGSLELIDIKDKSCGE--GITLPLGGLRLSEQ 178 (508)
T ss_dssp SCEEEEEEECSSCEEEEEEETTEECC--CEEESCCHHHHHHH
T ss_pred CCCeEEEEeCCCceEEEEeeCCeeee--EEEecceEEehhhc
Confidence 35789999999999999998887753 57889999877764
No 53
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=52.93 E-value=13 Score=32.02 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=25.4
Q ss_pred ceEEEEeCCCCceeEEEeec--CeeccccceeecchHH
Q psy429 39 TTGIVLDSGDGVSHTVPIYE--GYALPHAILRLDLAGR 74 (243)
Q Consensus 39 ~~~lVvd~G~~~t~v~pv~~--g~~~~~~~~~~~~gG~ 74 (243)
.+.+|+|+|..+|.++=... +.+.......+++||.
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 46999999999999986533 3333333567777774
No 54
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=50.95 E-value=9.7 Score=35.42 Aligned_cols=45 Identities=16% Similarity=0.182 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhhccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCC
Q psy429 175 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 225 (243)
Q Consensus 175 ~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~v 225 (243)
-|.++.|=+|+|. .+++||+++.-...+..++.+||++|=|.||=
T Consensus 235 ~~v~~~I~~~AF~------~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd 279 (624)
T 1djx_A 235 CDVLRAIRDYAFK------ASPYPVILSLENHCSLEQQRVMARHLRAILGP 279 (624)
T ss_dssp HHHHHHHHHHTTT------SCSSCEEEEEEEECCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEecccCCHHHHHHHHHHHHHHHhh
Confidence 4667888888874 48999999999988999999999999887763
No 55
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=46.36 E-value=9.3 Score=32.29 Aligned_cols=127 Identities=10% Similarity=0.048 Sum_probs=68.2
Q ss_pred eeeeccCCCccccCcC--C---CCCCCcccCcceeccCCCc-------ccccCCCccccccchhhhccccccccCCCCCC
Q psy429 103 ALVVDNGSGMCKAGFA--G---DDAPRAVFPSIVGRPRHQG-------VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 170 (243)
Q Consensus 103 ~vViD~Gs~~~K~G~a--g---~~~P~~i~ps~vg~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~l~~p~~~G 170 (243)
.+-||+|-+.+|+-.. + +..-+..|||.++..+... .....+.+.+++|+.+.. +-....
T Consensus 9 iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~--------~~~~~~ 80 (329)
T 4apw_A 9 VMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVE--------DSSETS 80 (329)
T ss_dssp EEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSS--------CSGGGC
T ss_pred EEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCccccc--------ccccCC
Confidence 5678999999998542 2 2234567899988654311 011223346777875421 001111
Q ss_pred cccCHHHHHHHHHHHhhccccCC-CCCCceEeecCCCCC--hhHHHHHHHHhhhc-------------CCCCeEEeeehh
Q psy429 171 IVTNWDDMEKIWHHTFYNELRVA-PEEHPVLLTEAPLNP--KANREKMTQIMFET-------------FNTPAMYVAIQA 234 (243)
Q Consensus 171 ~i~d~d~~e~l~~~~~~~~L~~~-~~~~pvlltep~~~~--~~~re~~~eilFE~-------------~~vpav~~~~~~ 234 (243)
. +-+....++-.++...+... ..+..+++..|...- ...|+++.+.+-.. +.+..+.+.+++
T Consensus 81 k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~ 158 (329)
T 4apw_A 81 K--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEG 158 (329)
T ss_dssp C--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHH
T ss_pred c--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEecc
Confidence 1 22344555555553344322 123456666665433 23577777776632 224567778887
Q ss_pred hhccc
Q psy429 235 VNCCT 239 (243)
Q Consensus 235 ~ls~y 239 (243)
.-+.|
T Consensus 159 ~ga~~ 163 (329)
T 4apw_A 159 SGVLF 163 (329)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77665
No 56
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=46.02 E-value=15 Score=35.27 Aligned_cols=45 Identities=18% Similarity=0.235 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhccccCCCCCCceEeecCCCC-ChhHHHHHHHHhhhcCCC
Q psy429 175 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKANREKMTQIMFETFNT 225 (243)
Q Consensus 175 ~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~-~~~~re~~~eilFE~~~v 225 (243)
-|.++.|=+|+|. .+++||+++.-... +..++.+||++|=|.||=
T Consensus 385 ~~v~~~I~~~AF~------~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd 430 (799)
T 2zkm_X 385 KEAIEAIAESAFK------TSPYPIILSFENHVDSPRQQAKMAEYCRTIFGD 430 (799)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEccccCCCHHHHHHHHHHHHHHhhh
Confidence 3667788888874 48999999998888 899999999999887763
No 57
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=42.68 E-value=18 Score=34.79 Aligned_cols=45 Identities=22% Similarity=0.209 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCCC
Q psy429 175 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 225 (243)
Q Consensus 175 ~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~v 225 (243)
.|.++.|=+|+|. .+++||+++.-...+..++.+||++|=|.||=
T Consensus 394 ~~v~~~I~~~AF~------~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd 438 (816)
T 3qr0_A 394 KDVVYAIAESAFK------VSDYPVILSFENHCSVAQQKLLAQYCNEAFGE 438 (816)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEECCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc------CCCCCEEEEEecCCCHHHHHHHHHHHHHHhhh
Confidence 4678888888884 47999999999999999999999999888774
No 58
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=42.31 E-value=35 Score=29.09 Aligned_cols=131 Identities=12% Similarity=0.172 Sum_probs=69.4
Q ss_pred eeeeccCCCccccCcCCCCCCCcccCcceeccCCCcc-cc--------------cCCCcc-ccccchhhhccccccccCC
Q psy429 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV-MV--------------GMGQKD-SYVGDEAQSKRGILTLKYP 166 (243)
Q Consensus 103 ~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~-~~--------------~~~~~~-~~~g~~~~~~~~~~~l~~p 166 (243)
.+=+|+|-+.+|+ ..++ =...|||.++...+... +. ..+... +++|+.+...... ..+.
T Consensus 6 iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~~~ 80 (355)
T 3js6_A 6 VMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GKDT 80 (355)
T ss_dssp EEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CEEC
T ss_pred EEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--cccc
Confidence 4678999999996 3333 25789999886543210 00 112234 7788876432111 1111
Q ss_pred C-CCCcccCHHHHHHHHHHHhh---ccccCCCCCCceEeecCCCCChhHH-HHHHHHhhhc-----------CCCCeEEe
Q psy429 167 I-EHGIVTNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR-EKMTQIMFET-----------FNTPAMYV 230 (243)
Q Consensus 167 ~-~~G~i~d~d~~e~l~~~~~~---~~L~~~~~~~pvlltep~~~~~~~r-e~~~eilFE~-----------~~vpav~~ 230 (243)
. .+....+-+ ...++-.++. ..+..+..+-.|++..|.-.....| +.+.+.+-.. +.+..+.+
T Consensus 81 ~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v 159 (355)
T 3js6_A 81 ASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKI 159 (355)
T ss_dssp CCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEE
T ss_pred cccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEE
Confidence 2 233443433 2223333332 1111111234677777876665555 5777776643 23467888
Q ss_pred eehhhhccc
Q psy429 231 AIQAVNCCT 239 (243)
Q Consensus 231 ~~~~~ls~y 239 (243)
.++++.|+|
T Consensus 160 ~pE~~~a~~ 168 (355)
T 3js6_A 160 VAQPMGTLL 168 (355)
T ss_dssp EEHHHHHHH
T ss_pred EeCcHHHHH
Confidence 888887765
No 59
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=36.60 E-value=79 Score=25.54 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=39.5
Q ss_pred HHHHhhhhcCCCeEEEecchhHHHHhhc-----CCceEEEEeCCCCceeEEEeecCeeccc
Q psy429 9 VVRIMFETFNTPAMYVAIQAAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALPH 64 (243)
Q Consensus 9 ~~e~~FE~~~~~~~~~~~~~~~~~~~~~-----g~~~~lVvd~G~~~t~v~pv~~g~~~~~ 64 (243)
+.+.+ +.|++| +++.+.+ -+++++. +..+.++|-+|... -..=|.+|.++..
T Consensus 87 l~~~l-~~~~~p-v~v~NDa-~aaa~~e~~~~~~~~~~v~l~~GtGi-G~giv~~G~l~~G 143 (292)
T 2gup_A 87 WYEAL-SSYQLP-VHLENDA-NCVGLSELLAHPELENAACVVIGTGI-GGAMIINGRLHRG 143 (292)
T ss_dssp HHHHT-GGGCCC-EEEEEHH-HHHHHHHHHHCTTCSSEEEEEESSSE-EEEEEETTEEECC
T ss_pred HHHHH-HHcCCC-EEEechH-HHHHHHHHHhcCCCCeEEEEEECCce-EEEEEECCEEEec
Confidence 56778 999999 8888888 7877763 56789999999863 3445678877754
No 60
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=33.39 E-value=60 Score=27.35 Aligned_cols=60 Identities=13% Similarity=0.125 Sum_probs=36.6
Q ss_pred eeeeccCCCccccCcCCCCCCCcccCcceeccCCCcccccCCCccccccchhhhccccccccCCCCCCcccCHHHHHHHH
Q psy429 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 182 (243)
Q Consensus 103 ~vViD~Gs~~~K~G~ag~~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~p~~~G~i~d~d~~e~l~ 182 (243)
.+-||+|+..+|+-...+..|+. ..+|....+ ...+++|.|.|.+.....+
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i---~~~g~~~~p--------------------------s~~~~~g~i~d~~~~~~~i 65 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL---KALASRPTP--------------------------PGLLMEGMVAEPAALAQEI 65 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE---EEEEEEECC--------------------------TTSEETTEESCHHHHHHHH
T ss_pred eEEEEeCCCeEEEEEEeCCceEE---EEEEeEECC--------------------------CCcccCCCcCCHHHHHHHH
Confidence 57899999999986543222321 112211000 1236889999999888887
Q ss_pred HHHhhccccC
Q psy429 183 HHTFYNELRV 192 (243)
Q Consensus 183 ~~~~~~~L~~ 192 (243)
+.++.+ ++.
T Consensus 66 k~~~~~-~~~ 74 (377)
T 2ych_A 66 KELLLE-ART 74 (377)
T ss_dssp HHHHHH-HTC
T ss_pred HHHHHH-cCC
Confidence 777753 443
No 61
>3d7j_A Uncharacterized protein SCO6650; T-fold, unknown function; 1.45A {Streptomyces coelicolor}
Probab=28.62 E-value=34 Score=25.52 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=31.1
Q ss_pred CCCcccCHHHHHHHHHHHhhccccCCCCCCceEeecCCCC-ChhHHHHHHHHhhhcCC
Q psy429 168 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKANREKMTQIMFETFN 224 (243)
Q Consensus 168 ~~G~i~d~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~-~~~~re~~~eilFE~~~ 224 (243)
+.|++.|+..++++++.+.. .| ||..|.-.|.+. ....-|.+|..+|+.+.
T Consensus 65 ~~GmVvDF~~lK~~ik~i~~-~l-----DH~~Ln~~p~f~~~npTaEnlA~~i~~~L~ 116 (152)
T 3d7j_A 65 EDNIVVDIGLATQELGAVVG-AL-----NYRNLDNEPDFAGVNTSTEFLAKVIADRLA 116 (152)
T ss_dssp TTSSSSCHHHHHHHHHHHHH-TT-----TTEEGGGCGGGTTSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHHH-hc-----CCcccccccccCCCCCCHHHHHHHHHHHHH
Confidence 57999999999999998653 22 222222223321 23346677777777653
No 62
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=27.51 E-value=73 Score=25.28 Aligned_cols=84 Identities=19% Similarity=0.181 Sum_probs=50.7
Q ss_pred EEEEeCCCCceeEEEeecCeeccccceeecchHHHHHHHHHHHHhhcCccccchhHHhhhhheeeeccCCCc-cccCcC-
Q psy429 41 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVLAALVVDNGSGM-CKAGFA- 118 (243)
Q Consensus 41 ~lVvd~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~ll~~~~~~~~~~~~~~~v~~~vViD~Gs~~-~K~G~a- 118 (243)
-|.+|.-...+.+.=+.+|.++........-....+...+.++|.+.++.+ .++..-++-.-.||++ +|+|.+
T Consensus 3 iL~idTs~~~~sval~~~~~~~~~~~~~~~~h~~~l~~~i~~~L~~a~~~~-----~did~Iav~~GPGsftglRig~~~ 77 (231)
T 2gel_A 3 ILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQEILAASGASL-----NEIDALAFGRGPGSFTGVRIGIGI 77 (231)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEECCSCCHHHHHHHHHHHHHHTTCCG-----GGCSEEEEECCSSCHHHHHHHHHH
T ss_pred EEEEECCCcCeEEEEEECCEEEEEEhhhhHHHHHHHHHHHHHHHHHcCCCH-----HHCCEEEEEcCCChhHhHHHHHHH
Confidence 456776666666666667765532222223345668888899999888765 2344445666777766 676643
Q ss_pred ------CCCCCCcccCc
Q psy429 119 ------GDDAPRAVFPS 129 (243)
Q Consensus 119 ------g~~~P~~i~ps 129 (243)
+-+.|-+-+++
T Consensus 78 ak~la~~~~~Pl~~V~~ 94 (231)
T 2gel_A 78 AQGLALGANLPMIGVST 94 (231)
T ss_dssp HHHHHHTTTCCEEEECH
T ss_pred HHHHHHHcCCCEEEecc
Confidence 35566555554
No 63
>2oba_A Probable 6-pyruvoyl tetrahydrobiopterin synthase; tetrahydrobiopterin biosynthesis, PTP synthase, PTPS, lyase; 2.33A {Pseudomonas aeruginosa} PDB: 3qn0_A 3qn9_A 3qna_A*
Probab=27.45 E-value=31 Score=25.29 Aligned_cols=50 Identities=14% Similarity=0.402 Sum_probs=30.7
Q ss_pred CCCcccCHHHHHHHHHHHhhccccCCCCCCceEeecCCCCChhHHHHHHHHhhhcCC
Q psy429 168 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 224 (243)
Q Consensus 168 ~~G~i~d~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~~~~~re~~~eilFE~~~ 224 (243)
+.|++.||..++++++.++ +.|+ |..|.-.|++ ....-|.+|+.+|+.+.
T Consensus 65 ~~GmV~Df~~lk~~~~~vi-~~lD-----H~~Lndv~~~-~~pTaEnlA~~i~~~L~ 114 (138)
T 2oba_A 65 HTGWIRDFAEIKAIFKPIY-EQLD-----HNYLNDIPGL-ENPTSENLCRWIWQQLK 114 (138)
T ss_dssp TTSSSSCHHHHHHHHHHHH-HHHT-----TSBGGGSTTC-SSCCHHHHHHHHHHHHG
T ss_pred CCCEEEeHHHHHHHHHHHH-HhCC-----CccchhcCCC-CCCCHHHHHHHHHHHHH
Confidence 5899999999999887765 2221 1111111222 23456778888888774
No 64
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=26.99 E-value=61 Score=21.94 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=25.2
Q ss_pred cccCHHHHHHHHHHHhhccccCCCCCCceEeecC
Q psy429 171 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 204 (243)
Q Consensus 171 ~i~d~d~~e~l~~~~~~~~L~~~~~~~pvlltep 204 (243)
...--+.+..+|+|+-.+.|. +|++...+.++.
T Consensus 26 ~~sr~evvk~lW~YIK~n~Lq-dp~~k~~I~cD~ 58 (93)
T 1v31_A 26 VETRPRIIAAIWHYVKARKLQ-NPNDPSFFNCDA 58 (93)
T ss_dssp EECSHHHHHHHHHHHHHTTCB-CSSCSSEEECCS
T ss_pred ccCHHHHHHHHHHHHHHccCc-CcccCceeehhH
Confidence 345677899999999877774 678888887764
No 65
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=24.94 E-value=1.4e+02 Score=24.32 Aligned_cols=50 Identities=14% Similarity=0.011 Sum_probs=30.8
Q ss_pred EEEEeCCCCceeEEEeecCeeccccceee-cchHHHHHHHHHHHHhhcCcc
Q psy429 41 GIVLDSGDGVSHTVPIYEGYALPHAILRL-DLAGRDLTDYLMKILTERGYS 90 (243)
Q Consensus 41 ~lVvd~G~~~t~v~pv~~g~~~~~~~~~~-~~gG~~~~~~l~~ll~~~~~~ 90 (243)
-|+||+|...+...-+-++..+....... ....+.+...+++++...+.+
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~~ 54 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNCS 54 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTCC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCCC
Confidence 38999999887776555554443321111 234566777788888766543
No 66
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=24.90 E-value=68 Score=23.89 Aligned_cols=32 Identities=34% Similarity=0.439 Sum_probs=25.7
Q ss_pred eeecchHHHHHHHHHHHHhhcCccccchhHHhhhhheeeeccCCCc
Q psy429 67 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVLAALVVDNGSGM 112 (243)
Q Consensus 67 ~~~~~gG~~~~~~l~~ll~~~~~~~~~~~~~~~v~~~vViD~Gs~~ 112 (243)
.-.+-+|-.+.+.+++.|.+++++ |+|+|++.
T Consensus 12 igsDhaG~~lK~~i~~~L~~~G~e--------------V~D~G~~~ 43 (148)
T 4em8_A 12 LSSDHAGVELRLFLSAYLRDLGCE--------------VFDCGCDP 43 (148)
T ss_dssp EEECGGGHHHHHHHHHHHHHTTCE--------------EEECCCCT
T ss_pred EEECchhHHHHHHHHHHHHHCCCE--------------EEEeCCCC
Confidence 345777889999999999988765 78999865
No 67
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=24.22 E-value=57 Score=22.12 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=25.6
Q ss_pred cccCHHHHHHHHHHHhhccccCCCCCCceEeecCC
Q psy429 171 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 205 (243)
Q Consensus 171 ~i~d~d~~e~l~~~~~~~~L~~~~~~~pvlltep~ 205 (243)
...--+.+..+|+|+-.+.|. +|.+...+.++..
T Consensus 26 ~~sr~evvk~lW~YIK~n~Lq-dp~~k~~I~cD~~ 59 (93)
T 1uhr_A 26 TQTRPVIIQALWQYIKTHKLQ-DPHEREFVLCDKY 59 (93)
T ss_dssp EEEHHHHHHHHHHHHHHTTCB-CSSCSSEECCCTT
T ss_pred ccCHHHHHHHHHHHHHhccCC-CccccceeechHH
Confidence 345567899999999877775 6788888877654
No 68
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=24.10 E-value=72 Score=23.77 Aligned_cols=30 Identities=33% Similarity=0.543 Sum_probs=24.9
Q ss_pred ecchHHHHHHHHHHHHhhcCccccchhHHhhhhheeeeccCCCc
Q psy429 69 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVLAALVVDNGSGM 112 (243)
Q Consensus 69 ~~~gG~~~~~~l~~ll~~~~~~~~~~~~~~~v~~~vViD~Gs~~ 112 (243)
.+-+|-.+.+.+++.|.+++++ |+|+|++.
T Consensus 7 sDhaG~~lK~~i~~~L~~~G~e--------------V~D~G~~~ 36 (149)
T 3he8_A 7 SDHGGYNLKREIADFLKKRGYE--------------VIDFGTHG 36 (149)
T ss_dssp ECGGGHHHHHHHHHHHHHTTCE--------------EEECCCCS
T ss_pred ECchhHHHHHHHHHHHHHCCCE--------------EEEcCCCC
Confidence 5678999999999999988765 67888764
No 69
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=24.02 E-value=44 Score=32.42 Aligned_cols=45 Identities=22% Similarity=0.253 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhccccCCCCCCceEeecCCCC-ChhHHHHHHHHhhhcCCC
Q psy429 175 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKANREKMTQIMFETFNT 225 (243)
Q Consensus 175 ~d~~e~l~~~~~~~~L~~~~~~~pvlltep~~~-~~~~re~~~eilFE~~~v 225 (243)
.|.++.|=+|+|. .+++||+++.-... +..++.+||++|-|.||=
T Consensus 389 ~~v~~~i~~~af~------~s~yPvilsle~h~~~~~qq~~~a~~~~~~~g~ 434 (885)
T 3ohm_B 389 RDVLEAIAETAFK------TSPYPVILSFENHVDSAKQQAKMAEYCRSIFGD 434 (885)
T ss_dssp HHHHHHHHHHTTS------SCCSCEEEEEEEECCCTTHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhhcc------CCCCCEEEEEecCCCCHHHHHHHHHHHHHHhhH
Confidence 5677888888874 38899999987776 688999999998887764
No 70
>3jsb_A Protein L, RNA-directed RNA polymerase; viral protein, vizier, structural genomics, marseilles struc genomics program @ AFMB; 2.13A {Lymphocytic choriomeningitis virus}
Probab=22.48 E-value=34 Score=26.53 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=32.3
Q ss_pred CCCCceeEEEeecCeeccccceeecchHHHHHHHHHHHHhhcC
Q psy429 46 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 88 (243)
Q Consensus 46 ~G~~~t~v~pv~~g~~~~~~~~~~~~gG~~~~~~l~~ll~~~~ 88 (243)
......+.+|++||+.-.+.-..-+..-..+...|.++|....
T Consensus 137 L~~~GItLVPviDGRsnYy~~~~PdWv~er~RwlL~~Ll~~~k 179 (204)
T 3jsb_A 137 LAVAGVTLVPIVDGRCDYDNSFMPEWANFKFRDLLFKLLEYSN 179 (204)
T ss_dssp HHHTTCEEEEEEEEESSCCCTTSCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCceEeeeecCCcccccccCcHHHHHHHHHHHHHHHHHHH
Confidence 3345568899999999888777777777777777777776543
No 71
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.69 E-value=2.3e+02 Score=22.93 Aligned_cols=53 Identities=15% Similarity=0.143 Sum_probs=37.4
Q ss_pred HHHHhhhhcCCCeEEEecchhHHHHhhc-------CCceEEEEeCCCCceeEEEeecCeeccc
Q psy429 9 VVRIMFETFNTPAMYVAIQAAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 64 (243)
Q Consensus 9 ~~e~~FE~~~~~~~~~~~~~~~~~~~~~-------g~~~~lVvd~G~~~t~v~pv~~g~~~~~ 64 (243)
+.+.+=+.|++| +++.+.+ -+++++. +..+.++|-+|.. .-..-+.+|..+..
T Consensus 100 l~~~l~~~~~~p-v~v~ND~-~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 100 VKEQIESALGIP-FALDNDA-NVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHHHHHHHCSC-EEEEEHH-HHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHHhCCC-EEEecHH-HHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 344455567888 7888888 7777652 4578999999987 44555678887764
Done!