Your job contains 1 sequence.
>psy4290
MTGTSNQFCENEVAELQEFFRSTLQLHLWEGQACFHNLELDLEALESLVPFHFVSGHINE
LRIKVPWTSLGSSSVEVVIDTIGYLSGIFECMAAIHALNGRYATALQYAILLVPIGHSAP
TAWCFKDRCTTTQAD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4290
(135 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1916380 - symbol:Vps13b "vacuolar protein sorting... 161 7.3e-10 1
UNIPROTKB|Q7Z7G8 - symbol:VPS13B "Vacuolar protein sortin... 161 7.3e-10 1
UNIPROTKB|F1SIL5 - symbol:VPS13A "Uncharacterized protein... 128 5.0e-07 2
UNIPROTKB|E1C549 - symbol:E1C549 "Uncharacterized protein... 132 6.4e-07 1
MGI|MGI:2444304 - symbol:Vps13a "vacuolar protein sorting... 129 1.4e-06 1
UNIPROTKB|Q96RL7 - symbol:VPS13A "Vacuolar protein sortin... 123 1.6e-06 2
ASPGD|ASPL0000032755 - symbol:AN5579 species:162425 "Emer... 126 2.9e-06 1
UNIPROTKB|G4N6L6 - symbol:MGG_06537 "Vacuolar protein sor... 121 1.0e-05 1
UNIPROTKB|D4A899 - symbol:Vps13a "Protein Vps13a" species... 118 2.0e-05 1
DICTYBASE|DDB_G0287055 - symbol:vps13F "vacuolar protein ... 117 3.6e-05 1
POMBASE|SPBC16C6.02c - symbol:vps1302 "chorein homolog (p... 111 4.4e-05 2
POMBASE|SPBC21C3.01c - symbol:vps13a "chorein homolog (pr... 112 8.6e-05 1
FB|FBgn0033194 - symbol:Vps13 "Vacuolar protein sorting 1... 101 0.00010 2
MGI|MGI:2444207 - symbol:Vps13c "vacuolar protein sorting... 111 0.00014 1
DICTYBASE|DDB_G0274917 - symbol:vps13B "Vacuolar protein ... 111 0.00023 1
CGD|CAL0001755 - symbol:VPS13 species:5476 "Candida albic... 103 0.00079 1
UNIPROTKB|Q59Q73 - symbol:VPS13 "Putative uncharacterized... 103 0.00079 1
SGD|S000003963 - symbol:VPS13 "Protein of unknown functio... 103 0.00081 1
>MGI|MGI:1916380 [details] [associations]
symbol:Vps13b "vacuolar protein sorting 13B (yeast)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006810 "transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR009543 MGI:MGI:1916380 GO:GO:0015031
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
CTD:157680 HOVERGEN:HBG094148 ChiTaRS:VPS13B EMBL:AC121598
EMBL:AC122241 EMBL:AC144772 EMBL:AC157521 EMBL:AC166356
EMBL:AK122302 IPI:IPI00125538 RefSeq:NP_796125.2 UniGene:Mm.309250
ProteinModelPortal:Q80TY5 STRING:Q80TY5 PhosphoSite:Q80TY5
PaxDb:Q80TY5 PRIDE:Q80TY5 GeneID:666173 KEGG:mmu:666173
UCSC:uc007vmh.2 HOGENOM:HOG000168923 InParanoid:Q80TY5
OrthoDB:EOG4PNXHH NextBio:429254 CleanEx:MM_VPS13B
Genevestigator:Q80TY5 GermOnline:ENSMUSG00000037646 Uniprot:Q80TY5
Length = 4013
Score = 161 (61.7 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 22 STLQLHLWEGQACFHNLELDLEALES--LVPFHFVSGHINELRIKVPWTSLGSSSVEVVI 79
S LQL LW G LEL L+ LE +PF F+SGHI+ELRI VPWT LGS V + I
Sbjct: 24 SDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHIHELRIHVPWTKLGSEPVVITI 83
Query: 80 DTI 82
+T+
Sbjct: 84 NTM 86
>UNIPROTKB|Q7Z7G8 [details] [associations]
symbol:VPS13B "Vacuolar protein sorting-associated protein
13B" species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR009543 GO:GO:0015031 InterPro:IPR015412
InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624 eggNOG:COG5043
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650 EMBL:AY223814
EMBL:AY223815 EMBL:AY223816 EMBL:AY223817 EMBL:AY223818
EMBL:AJ608772 EMBL:AJ608773 EMBL:AK091431 EMBL:AK000590
EMBL:AC018442 EMBL:AC023933 EMBL:AC026827 EMBL:AC104986
EMBL:AC105195 EMBL:AC105328 EMBL:AC107909 EMBL:AP004289
EMBL:AP004290 EMBL:AB011104 IPI:IPI00376436 IPI:IPI00376437
IPI:IPI00376439 IPI:IPI00420061 IPI:IPI00941724 IPI:IPI00970801
PIR:T00070 RefSeq:NP_056058.2 RefSeq:NP_060360.3 RefSeq:NP_689777.3
RefSeq:NP_858047.2 UniGene:Hs.191540 ProteinModelPortal:Q7Z7G8
IntAct:Q7Z7G8 STRING:Q7Z7G8 PhosphoSite:Q7Z7G8 DMDM:308153515
PaxDb:Q7Z7G8 PRIDE:Q7Z7G8 Ensembl:ENST00000355155
Ensembl:ENST00000357162 Ensembl:ENST00000358544
Ensembl:ENST00000395996 Ensembl:ENST00000441350
Ensembl:ENST00000496144 GeneID:157680 KEGG:hsa:157680
UCSC:uc003yis.3 UCSC:uc003yit.3 UCSC:uc003yiu.1 UCSC:uc003yiv.3
UCSC:uc003yiw.3 CTD:157680 GeneCards:GC08P100095 HGNC:HGNC:2183
HPA:HPA028146 MIM:216550 MIM:607817 neXtProt:NX_Q7Z7G8 Orphanet:193
Orphanet:217315 PharmGKB:PA26699 HOVERGEN:HBG094148
InParanoid:Q7Z7G8 OMA:VFISKFT PhylomeDB:Q7Z7G8 ChiTaRS:VPS13B
GenomeRNAi:157680 NextBio:87507 ArrayExpress:Q7Z7G8 Bgee:Q7Z7G8
Genevestigator:Q7Z7G8 GermOnline:ENSG00000132549 Uniprot:Q7Z7G8
Length = 4022
Score = 161 (61.7 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 22 STLQLHLWEGQACFHNLELDLEALES--LVPFHFVSGHINELRIKVPWTSLGSSSVEVVI 79
S LQL LW G LEL L+ LE +PF F+SGHI+ELRI VPWT LGS V + I
Sbjct: 24 SDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSGHIHELRIHVPWTKLGSEPVVITI 83
Query: 80 DTI 82
+T+
Sbjct: 84 NTM 86
>UNIPROTKB|F1SIL5 [details] [associations]
symbol:VPS13A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035176 "social behavior" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR009543 GO:GO:0007399
GO:GO:0008104 GO:GO:0007626 GO:GO:0035176 InterPro:IPR015412
InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 OMA:MPKFKIF
GeneTree:ENSGT00410000025397 EMBL:CU693389 EMBL:CU074391
Ensembl:ENSSSCT00000005817 Uniprot:F1SIL5
Length = 3172
Score = 128 (50.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 6 NQFCENEVAELQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIK 64
N+F + V L S L L +W G NLE+ AL L VPF GHI L +K
Sbjct: 12 NRFLGDYVVNLDT---SQLTLGIWGGDVALKNLEIKENALSQLDVPFKIKVGHIGNLNLK 68
Query: 65 VPWTSLGSSSVEVVIDTIGYL 85
+PW +L + VE V++ I YL
Sbjct: 69 IPWKNLYTQPVEAVLEDI-YL 88
Score = 35 (17.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 108 YAILLVPIGHSA 119
+ ILL P HSA
Sbjct: 1936 FFILLTPANHSA 1947
>UNIPROTKB|E1C549 [details] [associations]
symbol:E1C549 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] InterPro:IPR009543
GO:GO:0008104 InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333
Pfam:PF12624 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 EMBL:AADN02059630 EMBL:AADN02059631
EMBL:AADN02059632 EMBL:AADN02059633 EMBL:AADN02059634
EMBL:AADN02059635 EMBL:AADN02059636 EMBL:AADN02059637
EMBL:AADN02059638 EMBL:AADN02059639 EMBL:AADN02059640
EMBL:AADN02059641 IPI:IPI00603402 Ensembl:ENSGALT00000024483
Uniprot:E1C549
Length = 3008
Score = 132 (51.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 6 NQFCENEVAELQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIK 64
N+F + V L S L+L +W G NLE+ AL L VPF +GHI +L ++
Sbjct: 12 NRFLGDYVVNLDS---SQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAGHIGQLNLQ 68
Query: 65 VPWTSLGSSSVEVVIDTIGYL 85
+PW +L + VE V+D + YL
Sbjct: 69 IPWQNLYTQPVEAVLDGV-YL 88
>MGI|MGI:2444304 [details] [associations]
symbol:Vps13a "vacuolar protein sorting 13A (yeast)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006810 "transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031045 "dense core granule" evidence=IDA]
[GO:0035176 "social behavior" evidence=IMP] PROSITE:PS50005
PROSITE:PS50293 InterPro:IPR009543 MGI:MGI:2444304 GO:GO:0007399
GO:GO:0015031 GO:GO:0007626 GO:GO:0035176 InterPro:IPR015412
InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624 GO:GO:0031045
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
CTD:23230 HOVERGEN:HBG079736 OMA:MPKFKIF OrthoDB:EOG45QHC8
EMBL:AB115421 EMBL:AK052697 EMBL:AK135983 EMBL:AK142462
EMBL:AK220362 EMBL:BC050055 IPI:IPI00420394 IPI:IPI00762748
RefSeq:NP_766616.2 UniGene:Mm.211963 ProteinModelPortal:Q5H8C4
STRING:Q5H8C4 PhosphoSite:Q5H8C4 PaxDb:Q5H8C4 PRIDE:Q5H8C4
Ensembl:ENSMUST00000068156 GeneID:271564 KEGG:mmu:271564
UCSC:uc008gwv.1 GeneTree:ENSGT00410000025397 HOGENOM:HOG000218634
InParanoid:Q5H8C4 NextBio:393478 Bgee:Q5H8C4 CleanEx:MM_VPS13A
Genevestigator:Q5H8C4 GermOnline:ENSMUSG00000046230 Uniprot:Q5H8C4
Length = 3166
Score = 129 (50.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 6 NQFCENEVAELQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIK 64
N+F + V L E S L L +W+G NL + AL L VPF GHI L++K
Sbjct: 12 NRFLGDYVVNLDE---SQLSLGIWKGAVALKNLVIKENALHELDVPFKVKVGHIGSLKLK 68
Query: 65 VPWTSLGSSSVEVVIDTI 82
+PW +L + VE V++ I
Sbjct: 69 IPWKNLYTQPVEAVLEEI 86
>UNIPROTKB|Q96RL7 [details] [associations]
symbol:VPS13A "Vacuolar protein sorting-associated protein
13A" species:9606 "Homo sapiens" [GO:0008219 "cell death"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0035176 "social behavior"
evidence=IEA] [GO:0005622 "intracellular" evidence=NAS] [GO:0006895
"Golgi to endosome transport" evidence=NAS] [GO:0008104 "protein
localization" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] PROSITE:PS50005 PROSITE:PS50293 InterPro:IPR009543
GO:GO:0007399 GO:GO:0008104 GO:GO:0015031 GO:GO:0008219
GO:GO:0007626 GO:GO:0005622 GO:GO:0035176 GO:GO:0006895
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
EMBL:AF337532 EMBL:AB054005 EMBL:AJ608769 EMBL:AJ626859
EMBL:AL158159 EMBL:AL353710 EMBL:AL359204 EMBL:AB023203
EMBL:BC020576 EMBL:BC041852 EMBL:AK022967 IPI:IPI00478586
IPI:IPI00604660 IPI:IPI00746613 IPI:IPI00873376
RefSeq:NP_001018047.1 RefSeq:NP_001018048.1 RefSeq:NP_056001.1
RefSeq:NP_150648.2 UniGene:Hs.459790 UniGene:Hs.662256
ProteinModelPortal:Q96RL7 IntAct:Q96RL7 STRING:Q96RL7
PhosphoSite:Q96RL7 DMDM:71152975 PaxDb:Q96RL7 PRIDE:Q96RL7
Ensembl:ENST00000357409 Ensembl:ENST00000360280
Ensembl:ENST00000376634 Ensembl:ENST00000376636 GeneID:23230
KEGG:hsa:23230 UCSC:uc004akp.4 UCSC:uc004akq.4 UCSC:uc004akr.3
UCSC:uc004aks.3 CTD:23230 GeneCards:GC09P079793 HGNC:HGNC:1908
HPA:HPA021652 HPA:HPA021662 MIM:200150 MIM:605978
neXtProt:NX_Q96RL7 Orphanet:2388 PharmGKB:PA26444
HOVERGEN:HBG079736 OMA:MPKFKIF OrthoDB:EOG45QHC8 GenomeRNAi:23230
NextBio:44845 ArrayExpress:Q96RL7 Bgee:Q96RL7 Genevestigator:Q96RL7
GermOnline:ENSG00000197969 Uniprot:Q96RL7
Length = 3174
Score = 123 (48.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 6 NQFCENEVAELQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIK 64
N+F + V +L S L L +W+G NL++ AL L VPF GHI L++
Sbjct: 12 NRFLGDYVVDLDT---SQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVGHIGNLKLI 68
Query: 65 VPWTSLGSSSVEVVIDTIGYL 85
+PW +L + VE V++ I YL
Sbjct: 69 IPWKNLYTQPVEAVLEEI-YL 88
Score = 35 (17.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 108 YAILLVPIGHS 118
+ ILL P+ HS
Sbjct: 1939 FFILLTPVNHS 1949
>ASPGD|ASPL0000032755 [details] [associations]
symbol:AN5579 species:162425 "Emericella nidulans"
[GO:0045053 "protein retention in Golgi apparatus" evidence=IEA]
[GO:0006623 "protein targeting to vacuole" evidence=IEA]
[GO:0032120 "ascospore-type prospore membrane assembly"
evidence=IEA] [GO:0045324 "late endosome to vacuole transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0019898
"extrinsic to membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005628
"prospore membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR009543 GO:GO:0008104 EMBL:BN001305
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
EMBL:AACD01000096 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 OrthoDB:EOG4M68RM InterPro:IPR017148
PIRSF:PIRSF037235 HOGENOM:HOG000191432 RefSeq:XP_663183.1
STRING:Q5B1K1 EnsemblFungi:CADANIAT00003500 GeneID:2871869
KEGG:ani:AN5579.2 OMA:PAFDYTE Uniprot:Q5B1K1
Length = 3169
Score = 126 (49.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 16 LQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSS 74
++ F L + +W G NLEL EAL+ L +P + V GH+ EL + +PW++L
Sbjct: 18 VKNFDAKQLNIGIWSGDVKLRNLELRREALDQLHLPLNVVEGHVGELTLSIPWSNLRGKP 77
Query: 75 VEVVIDTIGYLS 86
V+V I+ + L+
Sbjct: 78 VKVDIEDVFLLA 89
>UNIPROTKB|G4N6L6 [details] [associations]
symbol:MGG_06537 "Vacuolar protein sorting-associated
protein 13" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR009543 GO:GO:0008104 EMBL:CM001234
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
InterPro:IPR017148 PIRSF:PIRSF037235 RefSeq:XP_003717004.1
ProteinModelPortal:G4N6L6 EnsemblFungi:MGG_06537T0 GeneID:2684692
KEGG:mgr:MGG_06537 Uniprot:G4N6L6
Length = 3223
Score = 121 (47.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 16 LQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSS 74
+Q F + L++ +W G NL+L EAL+ L +P + V GH+ L + +PW++L +
Sbjct: 18 VQNFDPAQLKVGIWSGDVNLKNLQLRREALDQLKLPLNVVEGHLGNLTLVIPWSNLRGAP 77
Query: 75 VEVVIDTIGYLS 86
V+V I+ + L+
Sbjct: 78 VKVYIEDVFLLA 89
>UNIPROTKB|D4A899 [details] [associations]
symbol:Vps13a "Protein Vps13a" species:10116 "Rattus
norvegicus" [GO:0007399 "nervous system development" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] InterPro:IPR009543 RGD:1311340
GO:GO:0008104 InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333
Pfam:PF12624 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 IPI:IPI00476312
Ensembl:ENSRNOT00000014800 ArrayExpress:D4A899 Uniprot:D4A899
Length = 3062
Score = 118 (46.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 6 NQFCENEVAELQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIK 64
N+F + V L + S L L +W+G NL + AL L VPF G I L++K
Sbjct: 12 NRFLGDYVVNLDQ---SQLSLGIWKGAVVLKNLVIKENALHELDVPFKVKVGRIGSLQLK 68
Query: 65 VPWTSLGSSSVEVVIDTIGYL 85
+PW +L + VE V++ I YL
Sbjct: 69 IPWKNLYTQPVEAVLEEI-YL 88
>DICTYBASE|DDB_G0287055 [details] [associations]
symbol:vps13F "vacuolar protein sorting-associated
protein 13 family protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] dictyBase:DDB_G0287055 GO:GO:0005525 GO:GO:0005794
GenomeReviews:CM000153_GR GO:GO:0015031 GO:GO:0003924 GO:GO:0006184
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
EMBL:AAFI02000096 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 RefSeq:XP_637397.1 EnsemblProtists:DDB0304549
GeneID:8625928 KEGG:ddi:DDB_G0287055 InParanoid:Q54KX3 OMA:ININAPH
Uniprot:Q54KX3
Length = 4246
Score = 117 (46.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 16 LQEFFRS----TLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSL 70
L+E+ ++ L + +W G NLEL ALE +PF G + +L +K+PW +L
Sbjct: 14 LKEYIKALNTDNLNISIWSGNVSLENLELKSRALEKFNLPFTIKEGFLGKLSLKIPWNNL 73
Query: 71 GSSSVEVVIDTIGYLS 86
+ V VVID + Y++
Sbjct: 74 KTEPVIVVIDQL-YIT 88
>POMBASE|SPBC16C6.02c [details] [associations]
symbol:vps1302 "chorein homolog (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0045053 "protein retention in Golgi apparatus" evidence=ISO]
[GO:0045324 "late endosome to vacuole transport" evidence=ISO]
InterPro:IPR009543 PomBase:SPBC16C6.02c GO:GO:0005794 GO:GO:0006886
GO:GO:0005768 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0045324
InterPro:IPR015412 InterPro:IPR026854 Pfam:PF09333 Pfam:PF12624
GO:GO:0045053 eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166
Pfam:PF06650 InterPro:IPR017148 PIRSF:PIRSF037235 EMBL:D89192
PIR:T39553 PIR:T42752 ProteinModelPortal:O42926 OrthoDB:EOG412QGF
NextBio:20801274 Uniprot:O42926
Length = 3131
Score = 111 (44.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 1 MTGTSNQFCENEVAELQEFFRST-LQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHI 58
+ G F + E E F +T L++ +W G NL+L A L +P G +
Sbjct: 2 LEGLLANFLNRLLGEYIENFDATQLKVAVWNGDVTLRNLQLKRSAFRKLELPISVQYGLV 61
Query: 59 NELRIKVPWTSLGSSSVEVVIDTIGYLSGIFE 90
EL +K+PW+SL + VE+ I I L+ + E
Sbjct: 62 EELTLKIPWSSLKNKPVEIYIVGIRALASMEE 93
Score = 33 (16.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 96 HALNGRYATALQYA-ILLVPI 115
H + RY +L+ A +LL P+
Sbjct: 684 HLIYDRYRVSLESARLLLGPL 704
>POMBASE|SPBC21C3.01c [details] [associations]
symbol:vps13a "chorein homolog (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0045053 "protein retention in
Golgi apparatus" evidence=ISO] [GO:0045324 "late endosome to
vacuole transport" evidence=ISO] PomBase:SPBC21C3.01c
InterPro:IPR009543 GO:GO:0005829 GO:GO:0005794 GO:GO:0006886
GO:GO:0005768 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0045324
InterPro:IPR026854 Pfam:PF12624 GO:GO:0045053 eggNOG:COG5043
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650 PIR:T50345
OrthoDB:EOG4M68RM NextBio:20801643 InterPro:IPR017148
PIRSF:PIRSF037235 Uniprot:P87319
Length = 3011
Score = 112 (44.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 24 LQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSSVEVVIDTI 82
L + +W G HNL + EAL+ L +P SG I +++PW++L + S+ + I+ I
Sbjct: 26 LNIGVWGGHVSLHNLRIKPEALDKLGIPIEITSGLIGTFTLEIPWSNLRNKSLTINIEDI 85
Query: 83 GYLS 86
YLS
Sbjct: 86 -YLS 88
>FB|FBgn0033194 [details] [associations]
symbol:Vps13 "Vacuolar protein sorting 13" species:7227
"Drosophila melanogaster" [GO:0006623 "protein targeting to
vacuole" evidence=ISS] InterPro:IPR009543 EMBL:AE013599
GO:GO:0008104 InterPro:IPR026854 Pfam:PF12624 eggNOG:COG5043
InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 RefSeq:NP_610299.2 UniGene:Dm.18802
PaxDb:A1Z713 EnsemblMetazoa:FBtr0088910 EnsemblMetazoa:FBtr0310024
GeneID:35693 KEGG:dme:Dmel_CG2093 UCSC:CG2093-RA CTD:35693
FlyBase:FBgn0033194 InParanoid:A1Z713 OMA:HILEPIN OrthoDB:EOG46HDRG
PhylomeDB:A1Z713 GenomeRNAi:35693 NextBio:794764 Bgee:A1Z713
Uniprot:A1Z713
Length = 3321
Score = 101 (40.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/68 (29%), Positives = 39/68 (57%)
Query: 16 LQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSS 74
++ R+ L++ +W G NL++ AL+ L +P + G++ +L +K+PW +L S
Sbjct: 19 IENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLVLKIPWKNLYSQP 78
Query: 75 VEVVIDTI 82
V V I+ +
Sbjct: 79 VIVNIEDL 86
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 119 APTAWCFKD 127
APTA CF+D
Sbjct: 2112 APTAQCFED 2120
>MGI|MGI:2444207 [details] [associations]
symbol:Vps13c "vacuolar protein sorting 13C (yeast)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009543
MGI:MGI:2444207 GO:GO:0008104 InterPro:IPR015412 InterPro:IPR026854
Pfam:PF09333 Pfam:PF12624 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 HOVERGEN:HBG079736
GeneTree:ENSGT00410000025397 HOGENOM:HOG000218634 EMBL:AC156799
EMBL:AK030931 EMBL:AK045749 EMBL:AK048766 EMBL:AK049557
EMBL:AK129486 IPI:IPI00551411 IPI:IPI00661059 IPI:IPI00761666
RefSeq:NP_796158.2 UniGene:Mm.241454 ProteinModelPortal:Q8BX70
PhosphoSite:Q8BX70 PaxDb:Q8BX70 PRIDE:Q8BX70
Ensembl:ENSMUST00000077879 GeneID:320528 KEGG:mmu:320528 CTD:54832
InParanoid:Q8BX70 OMA:KAYDKFD OrthoDB:EOG4NKBTN NextBio:396907
Bgee:Q8BX70 CleanEx:MM_VPS13C Genevestigator:Q8BX70
GermOnline:ENSMUSG00000035284 Uniprot:Q8BX70
Length = 3748
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 6 NQFCENEVAELQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIK 64
N+F + V L +S L+L +W G NL++ AL L VPF +G I++L +K
Sbjct: 12 NRFLGDYVENLN---KSQLKLGIWGGNVALDNLQIKENALSELDVPFKVKAGQIDKLTLK 68
Query: 65 VPWTSLGSSSVEVVIDTIGYL 85
+PW +L +V ++ + YL
Sbjct: 69 IPWKNLYGEAVVATLEGL-YL 88
>DICTYBASE|DDB_G0274917 [details] [associations]
symbol:vps13B "Vacuolar protein sorting-associated
protein 13C" species:44689 "Dictyostelium discoideum" [GO:0005615
"extracellular space" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0274917 GO:GO:0005794 GO:GO:0005615
GO:GO:0015031 GenomeReviews:CM000151_GR EMBL:AAFI02000012
InterPro:IPR026854 Pfam:PF12624 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 RefSeq:XP_644147.1 EnsemblProtists:DDB0234199
GeneID:8619576 KEGG:ddi:DDB_G0274917 InParanoid:Q555C6 OMA:CHIASIY
Uniprot:Q555C6
Length = 6061
Score = 111 (44.1 bits), Expect = 0.00023, P = 0.00023
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 24 LQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSSVEVVIDTI 82
L+++++ G NLE+ EAL+S +P H G I L +K+PWT+L SS V ID I
Sbjct: 26 LKINVFSGNVVLKNLEIKGEALQSFKLPLHVQKGIIGTLTLKIPWTNLKSSPVIFDIDCI 85
>CGD|CAL0001755 [details] [associations]
symbol:VPS13 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005628 "prospore membrane" evidence=IEA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IEA]
[GO:0032120 "ascospore-type prospore membrane assembly"
evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] [GO:0045324 "late endosome to vacuole transport"
evidence=IEA] InterPro:IPR009543 CGD:CAL0001755 GO:GO:0008104
EMBL:AACQ01000179 EMBL:AACQ01000178 InterPro:IPR026854 Pfam:PF12624
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
InterPro:IPR017148 PIRSF:PIRSF037235 RefSeq:XP_711864.1
RefSeq:XP_723604.1 STRING:Q59Q73 GeneID:3646528 GeneID:3646548
KEGG:cal:CaO19.11894 KEGG:cal:CaO19.4416 Uniprot:Q59Q73
Length = 3083
Score = 103 (41.3 bits), Expect = 0.00079, P = 0.00079
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 16 LQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSS 74
L+ F + L + +W G NL L E+L+ +P G + +L +++PW++L
Sbjct: 18 LENFDTNQLNIGIWSGDVKLRNLRLRKESLDKFKLPVDVKFGQLGQLTLQIPWSNLKGKP 77
Query: 75 VEVVIDTIGYL 85
V V+I+ + YL
Sbjct: 78 VRVIIEDV-YL 87
>UNIPROTKB|Q59Q73 [details] [associations]
symbol:VPS13 "Putative uncharacterized protein VPS13"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR009543 CGD:CAL0001755
GO:GO:0008104 EMBL:AACQ01000179 EMBL:AACQ01000178
InterPro:IPR026854 Pfam:PF12624 eggNOG:COG5043 InterPro:IPR026847
PANTHER:PTHR16166 Pfam:PF06650 InterPro:IPR017148 PIRSF:PIRSF037235
RefSeq:XP_711864.1 RefSeq:XP_723604.1 STRING:Q59Q73 GeneID:3646528
GeneID:3646548 KEGG:cal:CaO19.11894 KEGG:cal:CaO19.4416
Uniprot:Q59Q73
Length = 3083
Score = 103 (41.3 bits), Expect = 0.00079, P = 0.00079
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 16 LQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSS 74
L+ F + L + +W G NL L E+L+ +P G + +L +++PW++L
Sbjct: 18 LENFDTNQLNIGIWSGDVKLRNLRLRKESLDKFKLPVDVKFGQLGQLTLQIPWSNLKGKP 77
Query: 75 VEVVIDTIGYL 85
V V+I+ + YL
Sbjct: 78 VRVIIEDV-YL 87
>SGD|S000003963 [details] [associations]
symbol:VPS13 "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0019898 "extrinsic to membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0045053
"protein retention in Golgi apparatus" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IGI;IMP] [GO:0005628
"prospore membrane" evidence=IDA] [GO:0006623 "protein targeting to
vacuole" evidence=IMP] [GO:0032120 "ascospore-type prospore
membrane assembly" evidence=IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005768 "endosome"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
SGD:S000003963 InterPro:IPR009543 GO:GO:0005739 GO:GO:0005794
GO:GO:0019898 EMBL:BK006945 GO:GO:0005628 InterPro:IPR011050
SUPFAM:SSF51126 GO:GO:0006623 GO:GO:0045324 GO:GO:0032120
InterPro:IPR026854 Pfam:PF12624 GO:GO:0045053 EMBL:Z73144
eggNOG:COG5043 InterPro:IPR026847 PANTHER:PTHR16166 Pfam:PF06650
GeneTree:ENSGT00410000025397 OrthoDB:EOG4M68RM InterPro:IPR017148
PIRSF:PIRSF037235 EMBL:AF001317 EMBL:Z73145 PIR:S64791
RefSeq:NP_013060.1 ProteinModelPortal:Q07878 DIP:DIP-6519N
IntAct:Q07878 MINT:MINT-645047 STRING:Q07878 PaxDb:Q07878
PeptideAtlas:Q07878 PRIDE:Q07878 EnsemblFungi:YLL040C GeneID:850619
KEGG:sce:YLL040C CYGD:YLL040c HOGENOM:HOG000191432 OMA:SGVIWEE
NextBio:966517 Genevestigator:Q07878 GermOnline:YLL040C
Uniprot:Q07878
Length = 3144
Score = 103 (41.3 bits), Expect = 0.00081, P = 0.00081
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 16 LQEFFRSTLQLHLWEGQACFHNLELDLEALESL-VPFHFVSGHINELRIKVPWTSLGSSS 74
++ F + L + +W G NL+L + L+SL +P SG + +L + VPW+SL +
Sbjct: 18 VENFDPNQLNVGIWSGDVKLKNLKLRKDCLDSLNLPIDVKSGILGDLVLTVPWSSLKNKP 77
Query: 75 VEVVID 80
V+++I+
Sbjct: 78 VKIIIE 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 135 135 0.00091 102 3 11 22 0.37 31
30 0.44 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 601 (64 KB)
Total size of DFA: 148 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.07u 0.08s 12.15t Elapsed: 00:00:05
Total cpu time: 12.07u 0.08s 12.15t Elapsed: 00:00:06
Start: Thu Aug 15 11:37:49 2013 End: Thu Aug 15 11:37:55 2013