RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4294
(238 letters)
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 131 bits (333), Expect = 3e-38
Identities = 57/241 (23%), Positives = 83/241 (34%), Gaps = 72/241 (29%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGG + G+ P+IVS+S G +CGGSL++ L+A HC + F I AG
Sbjct: 1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCV--SGYAQSGFQ--IRAG 56
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH-----SDADLAMVKLKEPFRQTTFVKPLDYYTARET 135
S+ R ++ + H ++ DLA++KL + +
Sbjct: 57 SLSRTSGGITSS-----LSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSD 111
Query: 136 NYINDVLSKTDRSEMSIVSGFGVTFQRDKDG----------IVS-------WGIG----- 173
+ V+G+G T + IVS +G
Sbjct: 112 PVAG---------SSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQ 162
Query: 174 --CALGYP-----------------------GIVSWGIGCAL-GYPGVYVRVDHYDPWIQ 207
CA G G VSWG GCA Y GVY V +I
Sbjct: 163 MFCA-GVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFID 221
Query: 208 S 208
+
Sbjct: 222 T 222
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 124 bits (314), Expect = 2e-35
Identities = 55/237 (23%), Positives = 84/237 (35%), Gaps = 66/237 (27%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGG+D G+ PY VSL L G+ CG S++ L+A HC + + N+ + G
Sbjct: 1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNL-NRLK--VHVG 57
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
+ Y + + + D+A+V L P + V+P+ T
Sbjct: 58 TNYLSESGDVYD-----VEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTN- 111
Query: 134 ETNYINDVLSKTDRSEMSIVSGFGVTFQ---------------------RDKDGIVSWGI 172
+ + ++ ++G+G T V
Sbjct: 112 DEDLESN---------PCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWRVIDSH 162
Query: 173 GCAL------------GYP--------GIVSWGIGCALGYPGVYVRVDHYDPWIQSV 209
C L G P GIVS+G CALG P VY RV + WI +
Sbjct: 163 ICTLTKRGEGACHGDSGGPLVANGAQIGIVSFGSPCALGEPDVYTRVSSFVSWINAN 219
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 121 bits (307), Expect = 3e-34
Identities = 39/251 (15%), Positives = 79/251 (31%), Gaps = 77/251 (30%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
I+GG+ + + P+ V + + +CGGS+++ + ++A C + + + I G
Sbjct: 1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCV--DGTKPSDIS--IHYG 56
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS------DADLAMVKLKEPFRQTT-FVKPLDYYTAR 133
S YR K IY + A+++ + P + K ++ +
Sbjct: 57 SSYRTTKGTSVM-----AKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLL 111
Query: 134 ETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG----------IVSW-----------GI 172
+ +VSG+G T + + +V
Sbjct: 112 YDPEPDT---------SVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEAD 162
Query: 173 G-------CALGYP----------------------GIVSWGIGCALGYPGVYVRVDHYD 203
CA G G+ S+ +P V++RV +Y
Sbjct: 163 KYIYDGVFCA-GGEYDETYIGYGDAGDPAVQNGTLVGVASYISSMPSEFPSVFLRVGYYV 221
Query: 204 PWIQSV-KNNG 213
I+ +
Sbjct: 222 LDIKDIISGKV 232
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 120 bits (302), Expect = 2e-33
Identities = 66/266 (24%), Positives = 97/266 (36%), Gaps = 79/266 (29%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGG+ GE P+ V L + G CGG+LI+ W +SA HCF + W + G
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCF-DKIKNWRNLI--AVLG 57
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPL---DYY 130
+ + Q +A + ++ D+A+++L +P T V PL +
Sbjct: 58 EHDLSEHDG--DEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERT 115
Query: 131 TARETNYINDVLSKTDRSEMSIVSGFGVTFQRDK-------------------------- 164
+ T S+VSG+G R
Sbjct: 116 FSERTLAFV---------RFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVG 166
Query: 165 -DGIVSWGIGCALGYP--------------------------GIVSWGIGCAL-GYPGVY 196
++ + CA GY GIVSWG GCA G+ GVY
Sbjct: 167 DSPNITEYMFCA-GYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVY 225
Query: 197 VRVDHYDPWIQSVKNNGDNAGVLISA 222
RV Y W+Q + + GVL+ A
Sbjct: 226 TRVSQYIEWLQKLMRSEPRPGVLLRA 251
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 118 bits (298), Expect = 5e-33
Identities = 56/249 (22%), Positives = 88/249 (35%), Gaps = 79/249 (31%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
IVGG + GEVP+ L +CGG+++S + L+A HC +
Sbjct: 1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFK------VRV 54
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTA 132
G +E ++E+ ++ H+ D D+A+++LK P V P
Sbjct: 55 GDRNTEQEEG--GEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPAS---- 108
Query: 133 RETNYINDVLSKTDRSE--MSIVSGFGVTFQRDKDG----------IVS---------WG 171
L + ++SG+G T D ++S
Sbjct: 109 ---------LPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGK 159
Query: 172 IG----CALGYP----------------------GIVSWGIGCAL-GYPGVYVRVDHYDP 204
I C G+ G+VSWG GCA PGVY +V +Y
Sbjct: 160 ITSNMFCV-GFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVK 218
Query: 205 WIQSV-KNN 212
WI++ N
Sbjct: 219 WIKNTIAAN 227
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 118 bits (298), Expect = 5e-33
Identities = 54/247 (21%), Positives = 90/247 (36%), Gaps = 74/247 (29%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
+VGG D PG+ P+ V L+ + +CGGS+++ +W ++A HC ++AG
Sbjct: 1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVE------TGVKITVVAG 54
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS---------DADLAMVKLKEPFRQTTFVKPLDYYT 131
E Q + + I H + D+A+++L EP ++V P+
Sbjct: 55 EHNIEETEHTEQKR--NVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIAD 112
Query: 132 ARETNYINDVLSKTDRSEMSIVSGFGVTFQRDK----------------------DGIVS 169
TN VSG+G F + + ++
Sbjct: 113 KEYTNIFLK-------FGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIT 165
Query: 170 WGIGCALGYP--------------------------GIVSWGIGCAL-GYPGVYVRVDHY 202
+ CA G+ GI+SWG CA+ G G+Y +V Y
Sbjct: 166 NNMFCA-GFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRY 224
Query: 203 DPWIQSV 209
WI+
Sbjct: 225 VNWIKEK 231
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 118 bits (298), Expect = 7e-33
Identities = 58/249 (23%), Positives = 87/249 (34%), Gaps = 78/249 (31%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGN-LYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
IVGG++ GE P+ L N +CGG+++S + L+A HC +
Sbjct: 1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRF------KVRV 54
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPL---DY 129
G +E E+ ++ H D D+A+++LK P V P +
Sbjct: 55 GDRNTEQEEGGEAVH--EVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPER 112
Query: 130 YTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDK----------------------DGI 167
A T + IVSGFG T ++ + I
Sbjct: 113 DWAESTLMTQ---------KTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFI 163
Query: 168 VSWGIGCALGYP--------------------------GIVSWGIGCAL-GYPGVYVRVD 200
++ + CA GY GIVSWG GCA G G+Y +V
Sbjct: 164 ITQNMFCA-GYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVT 222
Query: 201 HYDPWIQSV 209
+ WI
Sbjct: 223 AFLKWIDRS 231
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 119 bits (300), Expect = 9e-33
Identities = 68/275 (24%), Positives = 92/275 (33%), Gaps = 89/275 (32%)
Query: 17 IGGRIVGGRDVNPGEVPYIVSLSLYGN--LYCGGSLISLQWFLSARHCFVTENLVWNQFN 74
I GRIV G D G P+ V L L CG SLIS +W L+A HC + F
Sbjct: 27 IDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW-DKNFT 85
Query: 75 P---LIIAGSIYRNYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTF 123
L+ G R E+ + +++ + IY H D D+A++KLK+P + +
Sbjct: 86 ENDLLVRIGKHSRTRYERNIE-KISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDY 144
Query: 124 VKPL---DYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG-------------- 166
+ P+ D TA V+G+G +
Sbjct: 145 IHPVCLPDRETAASLLQAG---------YKGRVTGWGNLKETWTANVGKGQPSVLQVVNL 195
Query: 167 -IVSW---------GIG----CALGYP-------------------------------GI 181
IV I CA GY GI
Sbjct: 196 PIVERPVCKDSTRIRITDNMFCA-GYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGI 254
Query: 182 VSWGIGCAL-GYPGVYVRVDHYDPWIQS-VKNNGD 214
VSWG GC G G Y V WIQ + G+
Sbjct: 255 VSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE 289
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 120 bits (303), Expect = 3e-32
Identities = 68/273 (24%), Positives = 90/273 (32%), Gaps = 89/273 (32%)
Query: 19 GRIVGGRDVNPGEVPYIVSLSLYGN--LYCGGSLISLQWFLSARHCFVTENLVWNQFNP- 75
GRIV G D G P+ V L L CG SLIS +W L+A HC F
Sbjct: 164 GRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCL-LYPPWDKNFTEN 222
Query: 76 --LIIAGSIYRNYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTFVK 125
L+ G R E+ + +++ + IY H D D+A++KLK+P + ++
Sbjct: 223 DLLVRIGKHSRTRYERNIE-KISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIH 281
Query: 126 PL---DYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG---------------I 167
P+ D TA V+G+G + I
Sbjct: 282 PVCLPDRETAASLLQAG---------YKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPI 332
Query: 168 VSW---------GIG----CALGYP-------------------------------GIVS 183
V I CA GY GIVS
Sbjct: 333 VERPVCKDSTRIRITDNMFCA-GYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVS 391
Query: 184 WGIGCAL-GYPGVYVRVDHYDPWIQSV-KNNGD 214
WG GC G G Y V WIQ V G+
Sbjct: 392 WGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE 424
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 114 bits (287), Expect = 2e-31
Identities = 60/243 (24%), Positives = 89/243 (36%), Gaps = 79/243 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGG + P+ VSL+ G +CGGSL++ W +SA HC+ + V G
Sbjct: 1 IVGGYECKAYSQPHQVSLN-SGYHFCGGSLVNENWVVSAAHCYKSRVEVR--------LG 51
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
E Q + + H D D+ ++KL +P T+V+P+
Sbjct: 52 EHNIKVTEG--SEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVA----- 104
Query: 134 ETNYINDVLSKTDRSE--MSIVSGFGVTFQRDK----------------------DGIVS 169
L + M VSG+G T G+++
Sbjct: 105 --------LPTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMIT 156
Query: 170 WGIGCALGYP----------------------GIVSWGIGCAL-GYPGVYVRVDHYDPWI 206
+ CA GY G+VSWG GCA G PGVY +V ++ W+
Sbjct: 157 NAMFCA-GYLEGGKDSCQGDSGGPVVCNGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWL 215
Query: 207 QSV 209
S
Sbjct: 216 TST 218
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 115 bits (290), Expect = 2e-31
Identities = 53/260 (20%), Positives = 85/260 (32%), Gaps = 86/260 (33%)
Query: 17 IGGRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLV--WNQFN 74
+ RI+GG PG P++ ++ G+ +C GSL+ W +SA HCF +
Sbjct: 32 LRPRIIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVS--- 87
Query: 75 PLIIAGSIYRNYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTFVKP 126
++ G + N Q I + SD DL +++LK+ +
Sbjct: 88 --VVLGQHFFNRTTD--VTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR------ 137
Query: 127 LDYYTARETNYIN-----DVLSKTDRSEMSIVSGFGVTFQRDK----------------- 164
A + ++ + S ++G+G +
Sbjct: 138 ----CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADH 193
Query: 165 --------DGIVSWGIGCALGYP--------------------------GIVSWGIGCAL 190
+S + CA GY GI+SWG GC
Sbjct: 194 KCSSPEVYGADISPNMLCA-GYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGR 252
Query: 191 -GYPGVYVRVDHYDPWIQSV 209
PGVY RV +Y WI
Sbjct: 253 LHKPGVYTRVANYVDWINDR 272
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 114 bits (287), Expect = 2e-31
Identities = 56/246 (22%), Positives = 85/246 (34%), Gaps = 70/246 (28%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGG D G P++V L L CG SL+S W +SA HC NL +++ I G
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWT--AILG 58
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDYYTAR 133
++ Q I I + D D+AM+ L+ T +++P+
Sbjct: 59 LHMKSNLTSP-QTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEEN 117
Query: 134 ETNYINDVLSKTDRSEMSIVSGFGVTFQRDK-----------------------DGIVSW 170
+ ++G+G + + ++
Sbjct: 118 QVFPPG---------RNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITE 168
Query: 171 GIGCALGYP--------------------------GIVSWGIGCAL-GYPGVYVRVDHYD 203
+ CA GY G+ S+G CAL PGVY RV +
Sbjct: 169 NMICA-GYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFT 227
Query: 204 PWIQSV 209
WIQS
Sbjct: 228 EWIQSF 233
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 113 bits (286), Expect = 4e-31
Identities = 53/255 (20%), Positives = 82/255 (32%), Gaps = 84/255 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
++ G+ G+ P+ V L L CG LI W L+A HC L+
Sbjct: 1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESK------KLLVRL 54
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPL----D 128
G E+ +I ++ H +D D+A++ L +P + + P+
Sbjct: 55 GEYDLRRWEKWEL--DLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDS 112
Query: 129 YYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG--------------IVS----- 169
RE N + ++V+G+G R+K+ +V
Sbjct: 113 GLAERELNQAG---------QETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECS 163
Query: 170 --WGIG------CALGYP--------------------------GIVSWGIGCAL-GYPG 194
CA G G+VSWG GC L G
Sbjct: 164 EVMSNMVSENMLCA-GILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYG 222
Query: 195 VYVRVDHYDPWIQSV 209
VY +V Y WI
Sbjct: 223 VYTKVSRYLDWIHGH 237
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 112 bits (284), Expect = 6e-31
Identities = 65/248 (26%), Positives = 86/248 (34%), Gaps = 81/248 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGG VPY VSL G +CGGSLI+ QW +SA HC+ + V G
Sbjct: 1 IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCYKSGIQVR--------LG 51
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
N E Q + H + D+ ++KLK + V +
Sbjct: 52 EDNINVVEGNE--QFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASIS----- 104
Query: 134 ETNYINDVLSKTDRSE--MSIVSGFGVTFQRDKDG----------IVS---------WGI 172
L + S ++SG+G T I+S I
Sbjct: 105 --------LPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQI 156
Query: 173 G----CALGYP----------------------GIVSWGIGCAL-GYPGVYVRVDHYDPW 205
CA GY GIVSWG GCA PGVY +V +Y W
Sbjct: 157 TSNMFCA-GYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSW 215
Query: 206 IQSV-KNN 212
I+ +N
Sbjct: 216 IKQTIASN 223
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 118 bits (297), Expect = 7e-31
Identities = 48/252 (19%), Positives = 80/252 (31%), Gaps = 76/252 (30%)
Query: 18 GGRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
RIVGG+ G++P+ V++ + CGG I W L+A HC I
Sbjct: 319 RKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKT----HRYQI 374
Query: 78 IAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDYY 130
+ + + KR + + I +H D+A++++K+
Sbjct: 375 WTTVVDWIHPDLKRI-VIEYVDRIIFHENYNAGTYQNDIALIEMKKDGN----------K 423
Query: 131 TARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK--------------------D 165
E + + + IVSG+G ++ +
Sbjct: 424 KDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSKFYGN 483
Query: 166 GIVSWGIGCALGYP---------------------------GIVSWGIGCAL-GYPGVYV 197
+ CA G G+VSWG C +PGVY
Sbjct: 484 RFYEKEMECA-GTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYT 542
Query: 198 RVDHYDPWIQSV 209
+V +Y WI
Sbjct: 543 KVANYFDWISYH 554
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 113 bits (285), Expect = 7e-31
Identities = 65/271 (23%), Positives = 89/271 (32%), Gaps = 89/271 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGN--LYCGGSLISLQWFLSARHCFVTENLVWNQFNP--- 75
IV G D G P+ V L L CG SLIS +W L+A HC + F
Sbjct: 1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW-DKNFTENDL 59
Query: 76 LIIAGSIYRNYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTFVKPL 127
L+ G R E+ + +++ + IY H D D+A++KLK+P + ++ P+
Sbjct: 60 LVRIGKHSRTRYERNIE-KISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPV 118
Query: 128 ---DYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG---------------IVS 169
D TA V+G+G + IV
Sbjct: 119 CLPDRETAASLLQAG---------YKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVE 169
Query: 170 W---------GIG----CALGYP-------------------------------GIVSWG 185
I CA GY GIVSWG
Sbjct: 170 RPVCKDSTRIRITDNMFCA-GYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWG 228
Query: 186 IGCAL-GYPGVYVRVDHYDPWIQS-VKNNGD 214
GC G G Y V WIQ + G+
Sbjct: 229 EGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE 259
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 112 bits (282), Expect = 1e-30
Identities = 50/254 (19%), Positives = 80/254 (31%), Gaps = 89/254 (35%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW----NQFNPL 76
++GG + N E +V+ +C G+LI+ +W L+A HC T + ++
Sbjct: 1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCDNTNFQMKLGVHSKKVL- 59
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDY 129
N EQ R P + D D+ ++KL + + PL
Sbjct: 60 --------NEDEQTRNP----KEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLS- 106
Query: 130 YTARETNYINDVLSKTDRS--EMSIVSGFGVTFQRD------------------------ 163
L + S + + G+G
Sbjct: 107 ------------LPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGY 154
Query: 164 KDGIVSWGIGCALGYP----------------------GIVSWGI-GCAL-GYPGVYVRV 199
+ + + CA G GIVS+G C PGVY +V
Sbjct: 155 PELLTEYRTLCA-GILEGGKDTCGGDSGGPLICNGQFQGIVSFGAHPCGQGLKPGVYTKV 213
Query: 200 DHYDPWIQSV-KNN 212
Y+ WIQS+ N
Sbjct: 214 FDYNHWIQSIIAGN 227
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 111 bits (280), Expect = 2e-30
Identities = 53/245 (21%), Positives = 78/245 (31%), Gaps = 82/245 (33%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
I+ G G P+ V+L L+CGG L++ +W L+A HC + E + + G
Sbjct: 1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKMNE---YT-----VHLG 52
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
S R+ Q + + + H DL +VKL R ++ VK +
Sbjct: 53 S----DTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVR----- 103
Query: 134 ETNYINDVLSKTDRSE--MSIVSGFGVTFQRDKDG----------IVSWGIGCALGYP-- 179
L VSG+G T D ++S C Y
Sbjct: 104 --------LPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQD-CTKVYKDL 154
Query: 180 ---------------------------------GIVSWG-IGCAL-GYPGVYVRVDHYDP 204
G+VSWG C PGVY +V +
Sbjct: 155 LENSMLCAGIPDSKKNACNGDSGGPLVCRGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTK 214
Query: 205 WIQSV 209
WI
Sbjct: 215 WINDT 219
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 111 bits (279), Expect = 3e-30
Identities = 61/252 (24%), Positives = 95/252 (37%), Gaps = 82/252 (32%)
Query: 21 IVGGRDVNPGEVPYIVSL----SLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
IVGG D GE PY +S + +CG S+ + + ++A HC ++ N
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDY-ENPSGLQ 59
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDY 129
I+AG + + E Q+ ++ I H D D++++KL TF
Sbjct: 60 IVAGELDMSVNEG--SEQIITVSKIILHENFDYNLLDNDISLLKLSGSL---TF------ 108
Query: 130 YTARETNYINDV-LSKTDRS--EMSIVSGFGVTFQRDKDG---------IVS-------W 170
+ + + L + + IV+G+G T + +VS +
Sbjct: 109 -----NDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADY 163
Query: 171 GIG-------CALGYP--------------------------GIVSWGIGCAL-GYPGVY 196
G CA G P GIVSWG GCA GYPGVY
Sbjct: 164 GADEILDSMICA-GVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVY 222
Query: 197 VRVDHYDPWIQS 208
V ++ WI++
Sbjct: 223 TEVSYHVDWIKA 234
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 110 bits (278), Expect = 4e-30
Identities = 50/245 (20%), Positives = 80/245 (32%), Gaps = 80/245 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGG + P P+ +L + +CGGSLIS +W L+A HC V ++ G
Sbjct: 1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAGFVD------VVLG 54
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
+ E + + H D+A+++L P T + + +
Sbjct: 55 AHNIREDEATQ--VTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD 112
Query: 134 ETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG--------------IVS-------WGI 172
+ +G+G+ D I+S +GI
Sbjct: 113 VGVG-----------TVVTPTGWGLP----SDSALGISDVLRQVDVPIMSNADCDAVYGI 157
Query: 173 G-----CALGYP---------------------GIVSWGI--GCALGYPGVYVRVDHYDP 204
C GI S+G GC GYP + RV ++
Sbjct: 158 VTDGNICI-DSTGGKGTCNGDSGGPLNYNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLD 216
Query: 205 WIQSV 209
WIQ+
Sbjct: 217 WIQTQ 221
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 110 bits (278), Expect = 5e-30
Identities = 55/253 (21%), Positives = 84/253 (33%), Gaps = 78/253 (30%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW----NQFNP- 75
IVGG + P+ V ++ G CGG L+ QW L+A HC ++++ + F+P
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPE 60
Query: 76 ----LIIAGSIYR--NYKEQKRQPQLNEIALIYWHSDADLAMVKLKEPFRQTTFVKPLDY 129
+ + Y + N S DL +++L EP T VK +D
Sbjct: 61 DTGQVFQVSHSFPHPLYDMSLLK---NRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMD- 116
Query: 130 YTARETNYINDVLSKTDRS--EMSIVSGFGVTFQRDKDG----------IVS-------- 169
L + + SG+G + ++S
Sbjct: 117 ------------LPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVH 164
Query: 170 -WGIG----CALGYP----------------------GIVSWGI-GCAL-GYPGVYVRVD 200
+ CA G GI SWG CAL P +Y +V
Sbjct: 165 PQKVTKFMLCA-GRWTGGKSTCSGDSGGPLVCNGVLQGITSWGSEPCALPERPSLYTKVV 223
Query: 201 HYDPWIQSV-KNN 212
HY WI+ N
Sbjct: 224 HYRKWIKDTIVAN 236
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 110 bits (277), Expect = 6e-30
Identities = 50/250 (20%), Positives = 80/250 (32%), Gaps = 80/250 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
++GG + N E ++ + CGG+LI+ +W L+ARHC I G
Sbjct: 1 VIGGDECNINEHRFLALV-YANGSLCGGTLINQEWVLTARHCDRGN---MR-----IYLG 51
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
+ + + + D D+ +++L P R + + PL
Sbjct: 52 MHNLKVLNKDAL-RRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLS----- 105
Query: 134 ETNYINDVLSKTDRS--EMSIVSGFGVTFQRDKDG----------IVS--------WGIG 173
L S + + G+G + I+ G+
Sbjct: 106 --------LPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLA 157
Query: 174 ----CALGYP----------------------GIVSWGI-GCAL-GYPGVYVRVDHYDPW 205
CA G GI+S G CA PG+Y +V Y W
Sbjct: 158 ATTLCA-GILEGGKDTCKGDSGGPLICNGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDW 216
Query: 206 IQSV-KNNGD 214
IQS+ N D
Sbjct: 217 IQSIISGNTD 226
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 111 bits (279), Expect = 9e-30
Identities = 59/270 (21%), Positives = 88/270 (32%), Gaps = 93/270 (34%)
Query: 19 GRIVGGRDVNPGEVPYIVSL-----SLYGNLYCGGSLISLQWFLSARHCFVTENLV--WN 71
+I+GG P+ ++ CGGSL+S W +SA HCF+ +
Sbjct: 22 FKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYI 81
Query: 72 QFNPLIIAGSIYRNYKEQKRQPQLNEIALIYWH---------SDADLAMVKLKEPFRQTT 122
+ G N Q E+ + H D+A++K++ +
Sbjct: 82 -----VYLGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGR-- 132
Query: 123 FVKPLDYYTARETNYINDV-L-SKTDR---SEMSIVSGFGVTFQRDK------------- 164
A+ + I + L S + ++GFG D
Sbjct: 133 --------CAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184
Query: 165 ------------DGIVSWGIGCALGYP--------------------------GIVSWGI 186
V+ + CA P GIVSWG
Sbjct: 185 ISHRECQQPHYYGSEVTTKMLCA-ADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGR 243
Query: 187 GCAL-GYPGVYVRVDHYDPWIQSV--KNNG 213
GCAL PGVY RV H+ PWI+S + NG
Sbjct: 244 GCALKDKPGVYTRVSHFLPWIRSHTKEENG 273
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 109 bits (275), Expect = 1e-29
Identities = 55/243 (22%), Positives = 80/243 (32%), Gaps = 78/243 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
+V G + PY +L G+L CGG LI W L+A HC NL + G
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCK-KPNLQ-------VFLG 52
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
+E + + + + H D D+ +++L P + + ++PL
Sbjct: 53 KHNLRQRESSQ--EQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLP----- 105
Query: 134 ETNYINDVLSKTDRSE--MSIVSGFGVTFQRDKDG--------IVS---------WGIG- 173
L + + + G+G T D +VS I
Sbjct: 106 --------LERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQ 157
Query: 174 ---CALGYP----------------------GIVSWG-IGCAL-GYPGVYVRVDHYDPWI 206
CA G G+VSWG I C PGVY V Y WI
Sbjct: 158 NMLCA-GDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWI 216
Query: 207 QSV 209
Q
Sbjct: 217 QKT 219
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 114 bits (288), Expect = 2e-29
Identities = 60/253 (23%), Positives = 85/253 (33%), Gaps = 79/253 (31%)
Query: 19 GRIVGGRDVNPGEVPYIVSLSLYGNL---YCGGSLISLQWFLSARHCFVTENLV--WNQF 73
RIVGG GE P+ V+L CGGS+I QW L+A HCF
Sbjct: 386 PRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILR-- 443
Query: 74 NPLIIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKP 126
+ +G + ++ ++ + I H S D+A++KL+ T +P
Sbjct: 444 ---VYSGILNQSEIKE--DTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRP 498
Query: 127 LDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDK---------------------- 164
+ + + N I V+G+G RDK
Sbjct: 499 ICLPSKGDRNVIY---------TDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY 549
Query: 165 -DGIVSWGIGCALGYP--------------------------GIVSWGIGCAL-GYPGVY 196
++ + CA GY GI SWG GCA PGVY
Sbjct: 550 RGHKITHKMICA-GYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVY 608
Query: 197 VRVDHYDPWIQSV 209
V Y WI
Sbjct: 609 TNVVEYVDWILEK 621
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 109 bits (274), Expect = 2e-29
Identities = 52/256 (20%), Positives = 85/256 (33%), Gaps = 86/256 (33%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLV--WNQFNPLII 78
I+GG PG P++ ++ G+ +C GSL+ W +SA HCF + ++
Sbjct: 1 IIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVS-----VV 54
Query: 79 AGSIYRNYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTFVKPLDYY 130
G + N Q I + SD DL +++LK+ +
Sbjct: 55 LGQHFFNRTTD--VTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR---------- 102
Query: 131 TARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK--------------------- 164
A + ++ + L + + ++G+G +
Sbjct: 103 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSS 162
Query: 165 ----DGIVSWGIGCALGYP--------------------------GIVSWGIGCAL-GYP 193
+S + CA GY GI+SWG GC P
Sbjct: 163 PEVYGADISPNMLCA-GYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKP 221
Query: 194 GVYVRVDHYDPWIQSV 209
GVY RV +Y WI
Sbjct: 222 GVYTRVANYVDWINDR 237
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 109 bits (274), Expect = 2e-29
Identities = 55/254 (21%), Positives = 89/254 (35%), Gaps = 83/254 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL-YCGGSLISLQWFLSARHCFVTENLVWNQFNPL--- 76
+VGG D + GE P+ VSL G CG SLIS W +SA HC++ + + +P
Sbjct: 1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRG-FRYSDPTQWT 59
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDY 129
G ++ + Q + I H D D+A+++L++P
Sbjct: 60 AFLGLHDQSQRSAPGV-QERRLKRIISHPFFNDFTFDYDIALLELEKP------------ 106
Query: 130 YTARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK-------------------- 164
A ++ + + L + V+G+G T
Sbjct: 107 --AEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCEN 164
Query: 165 --DGIVSWGIGCALGYP---------------------------GIVSWGIGCAL-GYPG 194
++ + C G+ G+VSWG GCA PG
Sbjct: 165 LLPQQITPRMMCV-GFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPG 223
Query: 195 VYVRVDHYDPWIQS 208
VY R+ + WI+
Sbjct: 224 VYTRLPLFRDWIKE 237
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 112 bits (281), Expect = 4e-29
Identities = 53/267 (19%), Positives = 91/267 (34%), Gaps = 87/267 (32%)
Query: 14 KIDIGGRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQF 73
GG+I GG+ PG+ P+ V + G G+L+ W L+A H + +
Sbjct: 155 ARTTGGQIYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAVYEQKHDASAL 212
Query: 74 NPLIIAGSIYR-NYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTFV 124
+ I G++ R + + ++ H D D+A++KL + +
Sbjct: 213 D--IRMGTLKRLSPHYTQAW-----SEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNI 265
Query: 125 KP--LDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRD------------------- 163
P L A + ++ SG+G+T +
Sbjct: 266 TPICLPRKEAESFMRTD---------DIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCT 316
Query: 164 --------KDGIVSWGIGCALGYP----------------------------GIVSWG-I 186
G V+ + CA G GIVSWG +
Sbjct: 317 AAYEKPPYPRGSVTANMLCA-GLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSM 375
Query: 187 GCAL-GYPGVYVRVDHYDPWIQSVKNN 212
C G GVY +V +Y PWI+++ ++
Sbjct: 376 NCGEAGQYGVYTKVINYIPWIENIISD 402
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 108 bits (272), Expect = 5e-29
Identities = 54/263 (20%), Positives = 75/263 (28%), Gaps = 91/263 (34%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL--- 76
I GR G P+I LS G +CGGSL+ W ++A HC +
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60
Query: 77 -------IIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTT 122
II G +R ++ Q + H + D+A+V+L E
Sbjct: 61 LSPSDFKIILGKHWRLRSDENEQHL--GVKHTTLHPQYDPNTFENDVALVELLESP---V 115
Query: 123 FVKPLDYYTARETNYINDV---LSKTDRSEMSIVSGFGVTFQ------------------ 161
++ + M IVSG+G F
Sbjct: 116 L-----------NAFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHS 164
Query: 162 ------RDKDGIVSWGIGCALGYP----------------------------GIVSWGIG 187
V+ + CA G G VSWG
Sbjct: 165 TCQKAYAPLKKKVTRDMICA-GEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDD 223
Query: 188 CAL-GYPGVYVRVDHYDPWIQSV 209
C GVY + H WIQ V
Sbjct: 224 CGKKDRYGVYSYIHHNKDWIQRV 246
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 108 bits (271), Expect = 6e-29
Identities = 52/258 (20%), Positives = 84/258 (32%), Gaps = 87/258 (33%)
Query: 21 IVGGRDVNPGEVPYIVSL--SLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLII 78
IVGG + P E P+ VS+ + +CGGS+I+ +W + A HC + + ++
Sbjct: 1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCM--QGEAPALVS--LV 56
Query: 79 AGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDYYT 131
G + RQ +++ I+ + + D++++K + +
Sbjct: 57 VGEHDSSAASTVRQ--THDVDSIFVNENYDPATLENDVSVIKTAV---------AITF-- 103
Query: 132 ARETNYINDV-LSKTDRS---EMSIVSGFGVTFQRDKDG----------IVS-------W 170
+ + S SG+G I + +
Sbjct: 104 ---DINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVY 160
Query: 171 GIG-------CALGYP-----------------------------GIVSWGIGCALGYPG 194
CA GIVSWGIGCA GYPG
Sbjct: 161 TSDTIYDDMICA-TDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPG 219
Query: 195 VYVRVDHYDPWIQSVKNN 212
VY RV + WI N
Sbjct: 220 VYSRVGFHAGWITDTITN 237
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 107 bits (270), Expect = 7e-29
Identities = 50/247 (20%), Positives = 72/247 (29%), Gaps = 87/247 (35%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
+VGG GE P++V L ++ CGG+L + L+A HC N + G
Sbjct: 1 VVGGTRAAQGEFPFMVRL----SMGCGGALYAQDIVLTAAHCVSGSG---NNTSITATGG 53
Query: 81 SIYRNYK-EQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDYYTA 132
+ K + + D A++KL +P Q T
Sbjct: 54 VVDLQSSSAVKVR-----STKVLQAPGFTKETYGKDWALIKLAQPINQPTLKIATTTAYN 108
Query: 133 RETNYINDVLSKTDRSEMSIVSGFGVTFQRDK-----------------------DGIVS 169
V+G+G + +V+
Sbjct: 109 ---------------QGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVA 153
Query: 170 WGIGCALGYP---------------------------GIVSWGIGCAL-GYPGVYVRVDH 201
+ CA GY GIVSWG GCA G GVY V
Sbjct: 154 NEMICA-GYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVST 212
Query: 202 YDPWIQS 208
+ I S
Sbjct: 213 FASAIAS 219
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 107 bits (270), Expect = 7e-29
Identities = 60/255 (23%), Positives = 82/255 (32%), Gaps = 92/255 (36%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLV--WNQFNPLII 78
IVGG +V GE P+ SL G+ CG +LI+ W +SA HCF T W
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWT-----AS 55
Query: 79 AGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDYYT 131
G + KR + I H D D+++ +L P +
Sbjct: 56 FGV-TIKPSKMKRG-----LRRIIVHEKYKHPSHDYDISLAELSSPV---PY-------- 98
Query: 132 ARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK---------------------- 164
TN ++ V L ++ V+GFG
Sbjct: 99 ---TNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQ 155
Query: 165 --DGIVSWGIGCALGYP---------------------------GIVSWGIGCAL-GYPG 194
+ ++ + CA G GIVSWG CA PG
Sbjct: 156 AYNDAITPRMLCA-GSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPG 214
Query: 195 VYVRVDHYDPWIQSV 209
VY RV WI S
Sbjct: 215 VYTRVTALRDWITSK 229
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 107 bits (269), Expect = 9e-29
Identities = 49/252 (19%), Positives = 85/252 (33%), Gaps = 86/252 (34%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
I+GG +V P PY+V LSL C G+LI+ W L+A HC + + +I G
Sbjct: 1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQ-------VILG 53
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDYYTAR 133
+ + ++ Q+ + + + + DL +++L E + +V L
Sbjct: 54 A--HSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILH----- 106
Query: 134 ETNYINDVLSKTDRS----EMSIVSGFGVT--------------------------FQRD 163
L K M V+G+G T +
Sbjct: 107 --------LPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYN 158
Query: 164 KDGIVSWGIGCALGYP----------------------GIVSWGI--GCAL-GYPGVYVR 198
+ ++ + CA G G+ S+G+ C PGVY+
Sbjct: 159 FNPVIGMNMVCA-GSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGLENKCGDPRGPGVYIL 217
Query: 199 V-DHYDPWIQSV 209
+ + WI
Sbjct: 218 LSKKHLNWIIMT 229
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 106 bits (268), Expect = 1e-28
Identities = 50/247 (20%), Positives = 77/247 (31%), Gaps = 82/247 (33%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
I+ GR+ P P+ +L L CGG L+ +W L+A HC + G
Sbjct: 1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQ--------KYSVRLG 52
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH----------SDADLAMVKLKEPFRQTTFVKPLDYY 130
++Q Q ++A H D+ +++L+ VKP+
Sbjct: 53 DHSLQSRDQPE--QEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQ-- 108
Query: 131 TARETNYINDVLSKTDRS--EMSIVSGFGVTFQRDKDG----------IVS--------- 169
L+ + I+SG+G ++ I S
Sbjct: 109 -----------LANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYP 157
Query: 170 WGIG----CALGYP---------------------GIVSWGIG-CAL-GYPGVYVRVDHY 202
I CA G GI SWG C PGVY ++ Y
Sbjct: 158 GKITEGMVCA-GSSNGADTCQGDSGGPLVCDGMLQGITSWGSDPCGKPEKPGVYTKICRY 216
Query: 203 DPWIQSV 209
WI+
Sbjct: 217 TTWIKKT 223
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 107 bits (269), Expect = 1e-28
Identities = 43/255 (16%), Positives = 75/255 (29%), Gaps = 78/255 (30%)
Query: 19 GRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW----NQFN 74
V + P+ V++ + CGG L+ W L+A HC+ + VW N
Sbjct: 2 APPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLE 61
Query: 75 P------LIIAGSI-YRNYKEQKRQPQLNEIALIYWHSDADLAMVKLKEPFRQTTFVKPL 127
+++ +I + ++ + Y DL +++L +P T VKP+
Sbjct: 62 DEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDY---SNDLMLLRLSKPADITDVVKPI 118
Query: 128 DYYTARETNYINDVLSKTDRS--EMSIVSGFGVTFQRDKDG----------IVSWGIGCA 175
L + + SG+G T ++ C
Sbjct: 119 T-------------LPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNED-CD 164
Query: 176 LGYPG-----------------------------------IVSWGI-GCAL-GYPGVYVR 198
+ I SWG C P VY +
Sbjct: 165 KAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTK 224
Query: 199 VDHYDPWIQSV-KNN 212
+ + WI+ NN
Sbjct: 225 LIKFSSWIRETMANN 239
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 109 bits (275), Expect = 2e-28
Identities = 69/274 (25%), Positives = 103/274 (37%), Gaps = 95/274 (34%)
Query: 19 GRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLII 78
RIVGGRD + G P+ VSL G CGGSL+S W L+A HCF N V +++ +
Sbjct: 116 DRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWR--VF 173
Query: 79 AGSIYRNYKEQKRQPQLNEIALIYWH-------------SDADLAMVKLKEPFRQTTFVK 125
AG++ + + + + +H + D+A+V L
Sbjct: 174 AGAVAQASPHGLQLG----VQAVVYHGGYLPFRDPNSEENSNDIALVHLSS--------- 220
Query: 126 PLDYYTARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK---------------- 164
PL T YI V L ++ ++ V+G+G T +
Sbjct: 221 PLPL-----TEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISND 275
Query: 165 --------DGIVSWGIGCALGYP------------------------------GIVSWGI 186
+ + CA GYP GIVSWG
Sbjct: 276 VCNGADFYGNQIKPKMFCA-GYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT 334
Query: 187 GCAL-GYPGVYVRVDHYDPWIQS-VKNNGDNAGV 218
GCAL PGVY +V + WI +K + + +G+
Sbjct: 335 GCALAQKPGVYTKVSDFREWIFQAIKTHSEASGM 368
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 106 bits (266), Expect = 3e-28
Identities = 57/249 (22%), Positives = 80/249 (32%), Gaps = 80/249 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGN-LYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
I+ G D + P+ +L L N LYCG L+ QW L+A HC V
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKKVFRVR--------L 52
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTA 132
G Y + Q+ + H DL ++KL R T V+P++
Sbjct: 53 G-HYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPIN---- 107
Query: 133 RETNYINDVLSKTDRSE--MSIVSGFGVTFQRDKDG----------IVS---------WG 171
+S S +VSG+G T ++S
Sbjct: 108 ---------VSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQ 158
Query: 172 IG----CALGYPG---------------------IVSWG-IGCAL-GYPGVYVRVDHYDP 204
I CA G +VSWG CA PGVY + +
Sbjct: 159 IDDTMFCA-GDKAGRDSCQGDSGGPVVCNGSLQGLVSWGDYPCARPNRPGVYTNLCKFTK 217
Query: 205 WIQSV-KNN 212
WIQ + N
Sbjct: 218 WIQETIQAN 226
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 106 bits (267), Expect = 3e-28
Identities = 57/262 (21%), Positives = 82/262 (31%), Gaps = 91/262 (34%)
Query: 21 IVGGRDVNPGEVPYIVSL-----SLYGNLYCGGSLISLQWFLSARHCFVTENLV--WNQF 73
I+GG P+ ++ CGGSLIS W +SA HCF+ +
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYI-- 58
Query: 74 NPLIIAGSIYRNYKEQKRQPQLNEIALIYWH---------SDADLAMVKLKEPFRQTTFV 124
+ G N Q E+ + H D+A++K++ +
Sbjct: 59 ---VYLGRSRLNSNTQ--GEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGR---- 109
Query: 125 KPLDYYTARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK--------------- 164
A+ + I + L ++GFG D
Sbjct: 110 ------CAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLIS 163
Query: 165 ----------DGIVSWGIGCALGYP--------------------------GIVSWGIGC 188
V+ + CA P GIVSWG GC
Sbjct: 164 HRECQQPHYYGSEVTTKMLCA-ADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGC 222
Query: 189 AL-GYPGVYVRVDHYDPWIQSV 209
AL PGVY RV H+ PWI+S
Sbjct: 223 ALKDKPGVYTRVSHFLPWIRSH 244
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 105 bits (264), Expect = 4e-28
Identities = 41/241 (17%), Positives = 73/241 (30%), Gaps = 72/241 (29%)
Query: 23 GGRDVNPGEVPYIVSL---SLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
GG + +VP+ V++ +L CGG+++S + L+A HC + +I
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQ----KPETIVIQY 57
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTF-VKPLDYYT 131
S + + + S + D+A+++L P + KP
Sbjct: 58 ESTNLWEDPG----KSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPD 113
Query: 132 ARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG---------IVS-------WGIG-- 173
+VSG+G D +V +G
Sbjct: 114 IEFRPKTG---------SDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFL 164
Query: 174 -----CALGYP--------------------GIVSWGIGCALGYPGVYVRVDHYDPWIQS 208
CA G+ ++ G P V+ +V Y WIQ
Sbjct: 165 SLQVFCA-QKVGVSLESGDAGDPTVQQDTLVGVAAYFPKRPEGAPEVFTKVGSYVSWIQD 223
Query: 209 V 209
+
Sbjct: 224 I 224
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 105 bits (264), Expect = 6e-28
Identities = 49/253 (19%), Positives = 77/253 (30%), Gaps = 78/253 (30%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW----NQFNP- 75
I+GG + P+ V++ G+ CGG L+ QW L+A HC + +W N
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNLSKDE 60
Query: 76 ----LIIAGSIYR--NYKEQKRQPQLNEIALIYWHSDADLAMVKLKEPFRQTTFVKPLDY 129
+ + + Y DL +++L +P R T VK LD
Sbjct: 61 DTAQFHQVSDSFLDPQF---DLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILD- 116
Query: 130 YTARETNYINDVLSKTDRS--EMSIVSGFGVTFQRDKDG----------IVS-------- 169
L + SG+G+ G + S
Sbjct: 117 ------------LPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAY 164
Query: 170 -WGIG----CALGYP----------------------GIVSWGIG-CAL-GYPGVYVRVD 200
+ CA + GI SWG CA V+ +V
Sbjct: 165 PEKMTEFVLCA-THRDDSGSICLGDSGGALICDGVFQGITSWGYSECADFNDNFVFTKVM 223
Query: 201 HYDPWIQSV-KNN 212
+ WI+ + N
Sbjct: 224 PHKKWIKETIEKN 236
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 104 bits (263), Expect = 9e-28
Identities = 65/255 (25%), Positives = 93/255 (36%), Gaps = 87/255 (34%)
Query: 21 IVGGRDVNPGEVPYIVSL---SLYGNLYCGGSLISLQWFLSARHCFVTENLV--WNQFNP 75
IVGG + + GE P+ VSL CGGSLI QW L+A HCF L W
Sbjct: 1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWR---- 56
Query: 76 LIIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVK--- 125
I +G + + + ++I I H + D+A++KL+ P T F K
Sbjct: 57 -IYSGILELSDIT--KDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPIS 113
Query: 126 -PLDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDK-------------------- 164
P + +T+ I V+G+G + ++ +
Sbjct: 114 LP----SKGDTSTIY---------TNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQK 160
Query: 165 ---DGIVSWGIGCALGYP--------------------------GIVSWGIGCAL-GYPG 194
D ++ + CA GY GI SWG GCA PG
Sbjct: 161 RYQDYKITQRMVCA-GYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPG 219
Query: 195 VYVRVDHYDPWIQSV 209
VY +V Y WI
Sbjct: 220 VYTKVAEYMDWILEK 234
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 104 bits (261), Expect = 2e-27
Identities = 52/259 (20%), Positives = 76/259 (29%), Gaps = 92/259 (35%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW----NQFNPL 76
IVGG P+ V++ CGG LI W ++A HC+ V N F
Sbjct: 1 IVGGYKCEKNSQPWQVAV--INEYLCGGVLIDPSWVITAAHCYSNNYQVLLGRNNLFKD- 57
Query: 77 IIAGSIYRNYKEQKRQPQ-------------LNEIALIYWHSDADLAMVKLKEPFRQTTF 123
Q+R + N+ DL ++ L EP T
Sbjct: 58 --------EPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGG 109
Query: 124 VKPLDYYTARETNYINDVLSKTDRS--EMSIVSGFGVTFQRDKDG----------IVS-- 169
VK +D L + + SG+G T + ++S
Sbjct: 110 VKVID-------------LPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNE 156
Query: 170 -------WGIG----CALGYP----------------------GIVSWGIG-CAL-GYPG 194
+ CA G GI S G CA P
Sbjct: 157 KCIETYKDNVTDVMLCA-GEMEGGKDTCAGDSGGPLICDGVLQGITSGGATPCAKPKTPA 215
Query: 195 VYVRVDHYDPWIQSV-KNN 212
+Y ++ + WI+ V K N
Sbjct: 216 IYAKLIKFTSWIKKVMKEN 234
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 104 bits (261), Expect = 2e-27
Identities = 58/268 (21%), Positives = 86/268 (32%), Gaps = 98/268 (36%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL------YCGGSLISLQWFLSARHCFVTENLVWNQFN 74
I GG + P+ ++ CGG LIS W LSA HCF +F
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQ------ERFP 54
Query: 75 PL---IIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFV 124
P +I G YR + + Q E+ H D D+A+++LK +
Sbjct: 55 PHHLTVILGRTYRVVPGE--EEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRC--- 109
Query: 125 KPLDYYTARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK--------------- 164
A+E++ + V L D +SG+G
Sbjct: 110 -------AQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYP 162
Query: 165 ----------DGIVSWGIGCALGYP--------------------------------GIV 182
+ V+ + CA G GI+
Sbjct: 163 SSRCTSQHLLNRTVTDNMLCA-GDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGII 221
Query: 183 SWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
SWG+GC PGVY +V +Y WI+
Sbjct: 222 SWGLGCGQKDVPGVYTKVTNYLDWIRDN 249
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 103 bits (260), Expect = 2e-27
Identities = 50/260 (19%), Positives = 73/260 (28%), Gaps = 91/260 (35%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW----NQFNPL 76
IVGG + P+ +L + CGG L+ QW L+A HC +W N F+
Sbjct: 1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDNYQLWLGRHNLFDD- 59
Query: 77 IIAGSIYRNYKEQKRQPQ-------------LNEIALIYWHSDADLAMVKLKEPFRQ-TT 122
Q N DL +++L EP T
Sbjct: 60 --------ENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITD 111
Query: 123 FVKPLDYYTARETNYINDVLSKTDRS--EMSIVSGFGVTFQRDKDG----------IVS- 169
VK ++ L + + SG+G + I+
Sbjct: 112 AVKVVE-------------LPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPN 158
Query: 170 --------WGIG----CALGYP----------------------GIVSWG-IGCAL-GYP 193
+ C G+ G+ SWG + C P
Sbjct: 159 DECKKAHVQKVTDFMLCV-GHLEGGKDTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNKP 217
Query: 194 GVYVRVDHYDPWIQSV-KNN 212
V VRV Y WI+ N
Sbjct: 218 SVAVRVLSYVKWIEDTIAEN 237
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 104 bits (262), Expect = 6e-27
Identities = 53/269 (19%), Positives = 84/269 (31%), Gaps = 96/269 (35%)
Query: 15 IDIGGRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFN 74
+ RI+GG D + P+ V N + GG+LI+ W L+A H
Sbjct: 77 FEEKQRIIGGSDADIKNFPWQVFF---DNPWAGGALINEYWVLTAAHVVEGNR------E 127
Query: 75 PLIIAGSIYRNYKEQKRQPQLNEIALIYWHS--------------DADLAMVKLKEPFRQ 120
P + GS + ++ ++ H D D+A+V+LK+P +
Sbjct: 128 PTMYVGSTSVQTSRLA-KSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKM 186
Query: 121 TTFVKP--LDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRD--------------- 163
V P L ++ ++ ++SG+G T +RD
Sbjct: 187 GPTVSPICLPGTSSDYNLMDG---------DLGLISGWGRTEKRDRAVRLKAARLPVAPL 237
Query: 164 --------KDGIVSWGIG-------CALGYP----------------------------G 180
+ CA G G
Sbjct: 238 RKCKEVKVEKPTADAEAYVFTPNMICA-GGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAG 296
Query: 181 IVSWGIGCALGYPGVYVRVDHYDPWIQSV 209
+VSWG C G G+Y RV +Y WI
Sbjct: 297 LVSWGPQC--GTYGLYTRVKNYVDWIMKT 323
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 102 bits (256), Expect = 1e-26
Identities = 50/265 (18%), Positives = 86/265 (32%), Gaps = 97/265 (36%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
I GG+ PG+ P+ V + G G+L+ W L+A H + + + I G
Sbjct: 1 IYGGQKAKPGDFPWQVLI--LGGTTAAGALLYDNWVLTAAHAVYEQKHDASALD--IRMG 56
Query: 81 SIYR-NYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTFVKPLDYYT 131
++ R + + ++ H D D+A++KL +
Sbjct: 57 TLKRLSPHYTQAW-----SEAVFIHEGYTHDAGFDNDIALIKLNN---------KVVI-- 100
Query: 132 ARETNYI-------NDVLSKTDRSEMSIVSGFGVT------------------------- 159
+ I + S ++ SG+G+T
Sbjct: 101 ---NSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAA 157
Query: 160 --FQRDKDGIVSWGIGCALGYP----------------------------GIVSWG-IGC 188
G V+ + CA G GIVSWG + C
Sbjct: 158 YEKPPYPRGSVTANMLCA-GLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNC 216
Query: 189 AL-GYPGVYVRVDHYDPWIQSVKNN 212
G GVY +V +Y PWI+++ ++
Sbjct: 217 GEAGQYGVYTKVINYIPWIENIISD 241
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 101 bits (255), Expect = 1e-26
Identities = 48/255 (18%), Positives = 81/255 (31%), Gaps = 87/255 (34%)
Query: 21 IVGGRDVNPGEVPYIVSL--SLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLII 78
I+GG + N E ++V+L S L+CGG+LI+ +W L+A HC + I
Sbjct: 1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDRKN---FR-----IK 52
Query: 79 AGSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYT 131
G + + Q + S D D+ +++L P
Sbjct: 53 LGMHSKKVPNEDEQ-TRVPKEKFFCLSSKNYTLWDKDIMLIRLDSP-------------- 97
Query: 132 ARETNYINDV-LSKTDRS--EMSIVSGFGVTFQRDKDG----------IVS--------- 169
+ + +I L + S + + G+G + ++
Sbjct: 98 VKNSKHIAPFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYP 157
Query: 170 WGIG-------CALGYP----------------------GIVSWGIG-CAL-GYPGVYVR 198
CA G GI SWG CA P Y +
Sbjct: 158 EFELPATSRTLCA-GILEGGKDTCKGDSGGPLICNGQFQGIASWGDDPCAQPHKPAAYTK 216
Query: 199 VDHYDPWIQSV-KNN 212
V + WI+++ N
Sbjct: 217 VFDHLDWIENIIAGN 231
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 101 bits (253), Expect = 2e-26
Identities = 50/249 (20%), Positives = 81/249 (32%), Gaps = 87/249 (34%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY----GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
I+GG + P PY+ L + + CGG LIS Q+ L+A HC
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK------------- 47
Query: 77 IIAGSIYR------NYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTF 123
G + ++++ Q ++ H + D+ ++KL++ T
Sbjct: 48 ---GREITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPA 104
Query: 124 VKPLDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG---------IVS----- 169
V + + + + M +G+G T RD I+
Sbjct: 105 VNVVPLPSPSD-----FIHPGA----MCWAAGWGKTGVRDPTSYTLREVELRIMDEKACV 155
Query: 170 --WGIG-----CALGYP----------------------GIVSWGIGCALGYPGVYVRVD 200
C G P GIVS+G A P ++ RV
Sbjct: 156 DYRYYEYKFQVCV-GSPTTLRAAFMGDSGGPLLCAGVAHGIVSYGHPDAK-PPAIFTRVS 213
Query: 201 HYDPWIQSV 209
Y PWI +V
Sbjct: 214 TYVPWINAV 222
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 101 bits (253), Expect = 2e-26
Identities = 58/256 (22%), Positives = 83/256 (32%), Gaps = 89/256 (34%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL---YCGGSLISLQWFLSARHCFVTENLV--WNQFNP 75
IVGG GE P+ V+L CGGS+I QW L+A HCF
Sbjct: 1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILR---- 56
Query: 76 LIIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLD 128
+ +G + ++ ++ + I H S D+A++KL+ ++
Sbjct: 57 -VYSGILNQSEIKE--DTSFFGVQEIIIHDQYKMAESGYDIALLKLET---------TVN 104
Query: 129 YYTARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDK------------------- 164
Y T+ + L V+G+G RDK
Sbjct: 105 Y-----TDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQ 159
Query: 165 ----DGIVSWGIGCALGYP--------------------------GIVSWGIGCAL-GYP 193
++ + CA GY GI SWG GCA P
Sbjct: 160 KRYRGHKITHKMICA-GYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERP 218
Query: 194 GVYVRVDHYDPWIQSV 209
GVY V Y WI
Sbjct: 219 GVYTNVVEYVDWILEK 234
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 100 bits (251), Expect = 4e-26
Identities = 51/244 (20%), Positives = 82/244 (33%), Gaps = 79/244 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
I+ G D +P P+ +L + L+C G L+ QW LSA HCF + I G
Sbjct: 1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQN--------SYTIGLG 52
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQTTFVKPLDYYTAR 133
++ Q+ E +L H DL ++KL E
Sbjct: 53 LHSLEADQEPGS-QMVEASLSVRHPEYNRPLLANDLMLIKLDES--------------VS 97
Query: 134 ETNYINDV-LSKTDRSE--MSIVSGFGVT----------------FQRDK-----DGIVS 169
E++ I + ++ + +VSG+G+ + D +
Sbjct: 98 ESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYH 157
Query: 170 WGIGCALGYP----------------------GIVSWGIG-CAL-GYPGVYVRVDHYDPW 205
+ CA G G+VS+G C G PGVY + + W
Sbjct: 158 PSMFCA-GGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEW 216
Query: 206 IQSV 209
I+
Sbjct: 217 IEKT 220
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 102 bits (256), Expect = 5e-26
Identities = 52/260 (20%), Positives = 86/260 (33%), Gaps = 90/260 (34%)
Query: 19 GRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLII 78
RI+GG+ G P+ V +++G GG+L+ +W L+A H + L +
Sbjct: 88 QRIIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDV 145
Query: 79 AGSIYRNYKEQKRQPQLNEIALIYWHS----------DADLAMVKLKEPFRQTTFVKPL- 127
+ K I + H + D+A+++L+ + P+
Sbjct: 146 FLGHTNVEELMKLGNH--PIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPIC 203
Query: 128 -----DYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQR-------------------- 162
+Y M VSGFGV ++
Sbjct: 204 LPDNDTFYDLG---------------LMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 248
Query: 163 -----DKDGIVSWGIGCALGYP----------------------------GIVSWGIGCA 189
++ + S + CA G+P GIVSWGIGC+
Sbjct: 249 WLRGKNRMDVFSQNMFCA-GHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS 307
Query: 190 LGYPGVYVRVDHYDPWIQSV 209
G G Y +V +Y WI+
Sbjct: 308 RG-YGFYTKVLNYVDWIKKE 326
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 102 bits (256), Expect = 9e-26
Identities = 52/261 (19%), Positives = 89/261 (34%), Gaps = 92/261 (35%)
Query: 19 GRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL-I 77
+I+GG+ G P+ V +++G GG+L+ +W L+A H + L +
Sbjct: 156 QQIIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDV 213
Query: 78 IAGSIYRNYKEQKRQPQLNEIALIYWHS----------DADLAMVKLKEPFRQTTFVKPL 127
G E+ + + I + H + D+A+++L+ + P+
Sbjct: 214 FLGHTNV---EELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPI 270
Query: 128 ------DYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQR------------------- 162
+Y M VSGFGV ++
Sbjct: 271 CLPDNDTFYDLG---------------LMGYVSGFGVMEEKIAHDLRFVRLPVANPQACE 315
Query: 163 ------DKDGIVSWGIGCALGYP----------------------------GIVSWGIGC 188
++ + S + CA G+P GIVSWGIGC
Sbjct: 316 NWLRGKNRMDVFSQNMFCA-GHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGC 374
Query: 189 ALGYPGVYVRVDHYDPWIQSV 209
+ G G Y +V +Y WI+
Sbjct: 375 SRG-YGFYTKVLNYVDWIKKE 394
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 100 bits (251), Expect = 1e-25
Identities = 60/267 (22%), Positives = 89/267 (33%), Gaps = 98/267 (36%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL------YCGGSLISLQWFLSARHCFVTENLV--WNQ 72
I+GG+D G P++VSL ++ CGGSL++ QW L+A HCF + V W
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWR- 59
Query: 73 FNPLIIAGSIYRNY---KEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTT 122
+I G+ + K K Q + I H D+A++K+
Sbjct: 60 ----LIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITP------ 109
Query: 123 FVKPLDYYTARETNYINDV------LSKTDRSEMSIVSGFGVTFQRDK------------ 164
P+ ++I + V+G+G + +
Sbjct: 110 ---PVTC-----GHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVD 161
Query: 165 -------------DGIVSWGIGCALGYP----------------------------GIVS 183
+G + CA GYP GI S
Sbjct: 162 LIDLGLCNSTRWYNGRIRSTNVCA-GYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITS 220
Query: 184 WGIGCAL-GYPGVYVRVDHYDPWIQSV 209
WG+GCA PGVY Y WI S
Sbjct: 221 WGVGCARAKRPGVYTSTWSYLNWIASK 247
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 98.4 bits (246), Expect = 2e-25
Identities = 51/251 (20%), Positives = 78/251 (31%), Gaps = 88/251 (35%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY----GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
I+ G + G PY L + ++CGGSLI +W L+A HC V +
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVSV------V 54
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKE-PFRQTTFVKP-- 126
+ GS + E I HS D+A++K+ + T ++P
Sbjct: 55 VYLGSAVQYEGEAVVN-----SERIISHSMFNPDTYLNDVALIKIPHVEY--TDNIQPIR 107
Query: 127 LDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG----------IVS------- 169
L + N + VSG+G + ++
Sbjct: 108 LPSGEELNNKFEN---------IWATVSGWGQS----NTDTVILQYTYNLVIDNDRCAQE 154
Query: 170 WGIG-------CALGY------------P----------GIVSWGI--GCALGYPGVYVR 198
+ G C P G+VS+ GC G P + R
Sbjct: 155 YPPGIIVESTICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSR 214
Query: 199 VDHYDPWIQSV 209
V Y WIQ
Sbjct: 215 VTSYMDWIQQN 225
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 98.2 bits (245), Expect = 7e-25
Identities = 50/267 (18%), Positives = 81/267 (30%), Gaps = 86/267 (32%)
Query: 18 GGRIVGGRDVNPGEVPYIVSL-----SLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQ 72
+I+ G D P E P+ + S + CGGSLI+ ++ ++A HC L
Sbjct: 20 ADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVG 79
Query: 73 FNPLIIAG---------SIYRNYKEQKRQPQLNEIALIYWHSD---------ADLAMVKL 114
+ G +P I H D D+A+++L
Sbjct: 80 ALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRL 139
Query: 115 KEPFRQTTFVKPLDYYTARETNYINDVLSKTDRSEMSIVSGFGVT--------------- 159
T +++P+ E + + V G+G T
Sbjct: 140 NRQVEFTNYIRPVCLPQPNEEVQVG---------QRLTVVGWGRTETGQYSTIKQKLAVP 190
Query: 160 ----------FQRDKDGIVSWGIGCALGYP--------------------------GIVS 183
F + S + CA G G+VS
Sbjct: 191 VVHAEQCAKTFGAAGVRVRSSQL-CA-GGEKAKDSCGGDSGGPLLAERANQQFFLEGLVS 248
Query: 184 WGIGCAL-GYPGVYVRVDHYDPWIQSV 209
+G C G+PG+Y +V Y WI+
Sbjct: 249 FGATCGTEGWPGIYTKVGKYRDWIEGN 275
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 94.9 bits (237), Expect = 4e-24
Identities = 50/247 (20%), Positives = 80/247 (32%), Gaps = 84/247 (34%)
Query: 21 IVGGRDVNPGEVPYIVSL---SLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
I+GGR+ P PY+ L S G CGG L+ + L+A HC+ + V
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGSNINVT------- 53
Query: 78 IAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPLDYY 130
G+ +E +Q H D+ +++L
Sbjct: 54 -LGAHNIQRRENTQQ--HITARRAIRHPQYNQRTIQNDIMLLQLSRR------------- 97
Query: 131 TARETNYINDV-LSKTDRS----EMSIVSGFG---------------VTFQRDKDGIVSW 170
R +N V L + + V+G+G + QRD+ + +
Sbjct: 98 -VRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIF 156
Query: 171 GIG------CALGYP----------------------GIVSWGIGCALGYPGVYVRVDHY 202
G C G GIVS+G + P V+ RV +
Sbjct: 157 GSYDPRRQICV-GDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGV-PPEVFTRVSSF 214
Query: 203 DPWIQSV 209
PWI++
Sbjct: 215 LPWIRTT 221
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 94.5 bits (236), Expect = 6e-24
Identities = 51/243 (20%), Positives = 84/243 (34%), Gaps = 78/243 (32%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL---YCGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
IVGG + P PY+ SL + GN +CGG+LI + L+A HC Q +
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRD----IPQRLVNV 56
Query: 78 IAGSIYRNYKEQKRQPQLNEIALIYWH------SDADLAMVKLKEPFRQTTFVKPLDYYT 131
+ G+ +E +Q +A ++ + D+ +++L P
Sbjct: 57 VLGAHNVRTQEPTQQ--HFSVAQVFLNNYDAENKLNDILLIQLSSP-------------- 100
Query: 132 ARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDKDG------------IVSWGIG- 173
A + + V L + D+ + G+G +V++
Sbjct: 101 ANLSASVATVQLPQQDQPVPHGTQCLAMGWGRV---GAHDPPAQVLQELNVTVVTFFCRP 157
Query: 174 ---CALGYP----------------------GIVSWGI-GCALG-YPGVYVRVDHYDPWI 206
C P GI S+ I GCA +P + RV Y WI
Sbjct: 158 HNICT-FVPRRKAGICFGDSGGPLICDGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWI 216
Query: 207 QSV 209
+S
Sbjct: 217 RST 219
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 95.0 bits (237), Expect = 6e-24
Identities = 43/254 (16%), Positives = 72/254 (28%), Gaps = 78/254 (30%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW----NQFNP- 75
+VGG + P+ V++ CGG L+ W L+A HC+V + VW F
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYVDQYEVWLGKNKLFQEE 60
Query: 76 ----LIIAGSIYR--NYKEQKRQPQLNEIALIYWHSDADLAMVKLKEPFRQTTFVKPLDY 129
+ + + Q + DL +++L +P T VKP+
Sbjct: 61 PSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADF---SDDLMLLRLSKPADITDVVKPIA- 116
Query: 130 YTARETNYINDVLSKTDRSE--MSIVSGFGVTFQRDKDG----------IVSWGIGCALG 177
L + + SG+G ++ CA
Sbjct: 117 ------------LPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNEN-CAKV 163
Query: 178 YPGIVS---------------------------W---GI------GCAL-GYPGVYVRVD 200
Y V+ G C G P +Y +
Sbjct: 164 YLQKVTDVMLCAGEMGGGKDTCRDDSGGPLICDGILQGTTSYGPVPCGKPGVPAIYTNLI 223
Query: 201 HYDPWIQSV-KNNG 213
++ WI+ N
Sbjct: 224 KFNSWIKDTMMKNA 237
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 94.1 bits (235), Expect = 1e-23
Identities = 54/255 (21%), Positives = 79/255 (30%), Gaps = 92/255 (36%)
Query: 21 IVGGRDVNPGEVPYIVSLSL----YGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
I+GG + P PY+ L + + +CGG LI + L+A HC V
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSITVT------ 54
Query: 77 IIAG--SIYRNYKEQKRQPQLNEIALIYWHSD-------ADLAMVKLKEPFRQTTFVKPL 127
G +I Q E+ + H D+ ++KLKE
Sbjct: 55 --LGAHNITEEEDTW----QKLEVIKQFRHPKYNTSTLHHDIMLLKLKEK---------- 98
Query: 128 DYYTARETNYINDV-LSKTDRS----EMSIVSGFGVTFQRDKDG----------IVS--- 169
A T + + M V+G+G T K G ++
Sbjct: 99 ----ASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRT-GVLKPGSDTLQEVKLRLMDPQA 153
Query: 170 ----WGIG-----CALGYP----------------------GIVSWGIGCALGYPGVYVR 198
C G P GIVS+G A P V+ R
Sbjct: 154 CSHFRDFDHNLQLCV-GNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAK-PPAVFTR 211
Query: 199 VDHYDPWIQSV-KNN 212
+ HY PWI + + N
Sbjct: 212 ISHYRPWINQILQAN 226
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 95.2 bits (237), Expect = 2e-23
Identities = 31/250 (12%), Positives = 68/250 (27%), Gaps = 79/250 (31%)
Query: 18 GGRIVGGRDVNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
G R + ++P+ V L+ G +CGG +I + L+ C + N
Sbjct: 91 GVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHR------NIT 144
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVK---- 125
+ + + I ++ H + DL++++L+ P +
Sbjct: 145 VKTYFNRTSQDPLMIK-----ITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCT 199
Query: 126 PLDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKDG-------IVSWGIGCALGY 178
P E ++ +L ++SG+ + +V C
Sbjct: 200 P-------EKDFAEHLLIP---RTRGLLSGWARNGTDLGNSLTTRPVTLVEGEE-CGQVL 248
Query: 179 P------------------------------------GIVSWGIGCAL-GYPGVYVRVDH 201
G++ + + +V
Sbjct: 249 NVTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSR 307
Query: 202 YDPWIQSVKN 211
Y W + + N
Sbjct: 308 YSLWFKQIMN 317
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 93.3 bits (233), Expect = 2e-23
Identities = 50/254 (19%), Positives = 79/254 (31%), Gaps = 97/254 (38%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY---GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
I+GG + P PY+ L + CGG L+ + L+A HC
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL-------------- 46
Query: 78 IAGSIYR------NYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFV 124
GS N E++R Q+ + H D+ ++KL
Sbjct: 47 --GSSINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRK------- 97
Query: 125 KPLDYYTARETNYINDV-LSKTDRS----EMSIVSGFG----------------VTFQRD 163
A T+ ++ + L ++ M V+G+G + Q +
Sbjct: 98 -------ADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSE 150
Query: 164 KDGIVSWGIG------CALGYP----------------------GIVSWGIGCALGYPGV 195
+ I + CA G P GIVS+G P V
Sbjct: 151 EKCIARFKNYIPFTQICA-GDPSKRKNSFSGDSGGPLVCNGVAQGIVSYGRNDG-TTPDV 208
Query: 196 YVRVDHYDPWIQSV 209
Y R+ + WI S
Sbjct: 209 YTRISSFLSWIHST 222
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 94.4 bits (235), Expect = 2e-23
Identities = 30/254 (11%), Positives = 69/254 (27%), Gaps = 78/254 (30%)
Query: 18 GGRIVGGRDVNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
G R + ++P+ V L+ G +CGG +I + L+ C + N
Sbjct: 50 GVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHR------NIT 103
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVK---- 125
+ + + I ++ H + DL++++L+ P +
Sbjct: 104 VKTYFNRTSQDPLMIK-----ITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCT 158
Query: 126 PLDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDKD-------------------- 165
P E ++ +L ++SG+ +
Sbjct: 159 P-------EKDFAEHLLIP---RTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLN 208
Query: 166 GIVSWGIGCALGY----------P------------GIVSWGIGCAL-GYPGVYVRVDHY 202
V+ C G++ + + +V Y
Sbjct: 209 VTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQ-PVGGQAHMVLVTKVSRY 267
Query: 203 DPWIQSV-KNNGDN 215
W + + + +
Sbjct: 268 SLWFKQIMNAHHHH 281
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 89.5 bits (223), Expect = 6e-22
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 20 RIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
I+GG++V+P P++ S+ G+ CGG LI QW L+A HC +P ++
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFT---KGQSPTVVL 58
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPL 127
G+ + + + Q EI D+ +VKL+ + VK L
Sbjct: 59 GA--HSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKML 111
Score = 49.5 bits (119), Expect = 2e-07
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 15/49 (30%)
Query: 166 GIVSWGIGCALGYPGIVSWGIGCALGYPGVYVRV-DHYDPWIQSV-KNN 212
IVS G C + PG+Y + Y WI+S
Sbjct: 202 AIVSGGHECGVAT-------------KPGIYTLLTKKYQTWIKSNLVPP 237
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 87.3 bits (217), Expect = 4e-21
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
I+GGR+V P PY+ SL G+ CGG L+ +W L+A HC ++ G
Sbjct: 1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRMAQLR-----LVLG 55
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH--------SDADLAMVKLKEPFRQTTFVKPL 127
+ I H + DLA+++L + + ++PL
Sbjct: 56 LHTLDSPGLTFH-----IKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPL 105
Score = 51.0 bits (123), Expect = 6e-08
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 180 GIVSWGIG-CAL-GYPGVYVRVDHYDPWIQSV-KNN 212
G++S+ C P V V Y WI+ V +
Sbjct: 196 GVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRS 231
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 85.3 bits (212), Expect = 2e-20
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFV-TENLVWNQFNPLIIA 79
I+GGR+ PY+ S+ L G CGG L++ QW LSA HC + ++
Sbjct: 1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQ-----VLL 55
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPL 127
G+ + E + +L ++ H D DL +++L E V+PL
Sbjct: 56 GAHSLSQPEPSK--RLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPL 108
Score = 52.6 bits (127), Expect = 1e-08
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 180 GIVSWGIG-CAL-GYPGVYVRVDHYDPWIQSV 209
G+V+ G C PG+Y RV Y WI SV
Sbjct: 195 GVVTSGSRVCGNRKKPGIYTRVASYAAWIDSV 226
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 84.9 bits (211), Expect = 2e-20
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGGR P + P++ S+ G +CGG+LI ++ ++A CF ++N + ++ G
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVST----VVLG 56
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKPL 127
+ + + ++RQ + + DL +++L T+ V L
Sbjct: 57 AY--DLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTIL 108
Score = 58.7 bits (143), Expect = 1e-10
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 180 GIVSWGIGCALGYPGVYVRVDHYDPWIQSV-KNNG 213
G+ S+ +G P + RV + WI V N G
Sbjct: 187 GVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNPG 221
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 85.0 bits (211), Expect = 4e-20
Identities = 53/257 (20%), Positives = 80/257 (31%), Gaps = 88/257 (34%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL----YCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
+VGG D P P+ VSL + CGG+L+ W L+A HC +
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSR------TYR 54
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH---------SDADLAMVKLKEPFRQTTFVKP- 126
++ G + E +++ + H + D+A++KL P T ++
Sbjct: 55 VVLGRHSLSTNEPGSLAV--KVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLG 112
Query: 127 -LDYYTARETNYINDVLSKTDRSEMSIVSGFGVTFQRDK--------------------- 164
L N + V+G+G
Sbjct: 113 CLPAAGTILPNN-----------YVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKP 161
Query: 165 ---DGIVSWGIGCALGYPGIVS------------------W---GI-------GCAL-GY 192
V + CA G GI+S W GI GC
Sbjct: 162 GWWGSTVKTNMICA-GGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHK 220
Query: 193 PGVYVRVDHYDPWIQSV 209
P V+ RV +Y WI SV
Sbjct: 221 PSVFTRVSNYIDWINSV 237
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 81.1 bits (201), Expect = 8e-20
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 21 IVGGRDVNPGEVPYIVSL-SLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
IV G + PG P+ VSL G +CGGSLI+ W ++A HC VT + V ++A
Sbjct: 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSDV-------VVA 53
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKP 126
G + +K Q +IA ++ + + D+ ++KL + V
Sbjct: 54 GEFDQGSSSEKI--QKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSA 105
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 83.9 bits (208), Expect = 1e-19
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLV--WNQFNPLII 78
I GG G+ P+ VS++ G CGGSL+S QW LSA HCF +E+ + +
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYE-----VK 55
Query: 79 AGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKP 126
G+ + + +++ + I H S D+A+++L P + +++P
Sbjct: 56 LGAHQLDSYSE--DAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRP 108
Score = 58.1 bits (141), Expect = 2e-10
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
GIVSWG C PGVY Y WIQS
Sbjct: 210 GIVSWGDACGARNRPGVYTLASSYASWIQSK 240
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 83.4 bits (207), Expect = 1e-19
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 17/121 (14%)
Query: 14 KIDIGGRIVGGRDVNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQ 72
+ RIV G + PG P+ VSL G +CGGSLI+ W ++A HC VT + V
Sbjct: 9 VLSGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSDV--- 65
Query: 73 FNPLIIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVK 125
++AG + + + Q +IA ++ + + D+ ++KL + V
Sbjct: 66 ----VVAGEFDQGSSSE--KIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVS 119
Query: 126 P 126
Sbjct: 120 A 120
Score = 57.6 bits (140), Expect = 3e-10
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
GIVSWG PGVY RV W+Q
Sbjct: 211 GIVSWGSSTCSTSTPGVYARVTALVNWVQQT 241
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 82.7 bits (205), Expect = 2e-19
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 18 GGRIVGGRDVNPGEVPYIVSLSL-YGNLYCGGSLISLQWFLSARHCFVTENLV--WNQFN 74
GR+VGG +P P+ VSL +G +CGG+LIS +W L+A HC +
Sbjct: 15 PGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYK--- 71
Query: 75 PLIIAGSIYRNYKEQKRQPQLNEIALIYWH-SDADLAMVKLKEPFRQTTFVKP 126
+I G+ E Q E++ ++ + D+A++KL P T V P
Sbjct: 72 --VILGAHQEVNLEP--HVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIP 120
Score = 56.9 bits (138), Expect = 5e-10
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
G+ SWG+GCA PGVYVRV + WI+ V
Sbjct: 213 GVTSWGLGCARPNKPGVYVRVSRFVTWIEGV 243
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 82.6 bits (205), Expect = 2e-19
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
+VGG +PG P+ VSL G +CGGSL+ QW L+AR CF + ++ + +
Sbjct: 1 VVGG---HPGNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYE--VWL 55
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWH-SDADLAMVKLKEPFRQTTFVKP 126
G++++N + + Q +A + S + L ++KL+ V
Sbjct: 56 GTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQRVAL 103
Score = 56.8 bits (138), Expect = 5e-10
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
GI+ CA +P V+ RV + WI V
Sbjct: 194 GIIIPNRVCARSRWPAVFTRVSVFVDWIHKV 224
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 81.9 bits (203), Expect = 4e-19
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
+V G + ++VSL CGGSLI W L+AR CF + +L + G
Sbjct: 1 VVNGIPT-RTNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDL----KDYEAWLG 55
Query: 81 SIYRNYKEQKRQPQLNEIALIYWH-SDADLAMVKLKEPFRQTTFVKP 126
+ + ++ Q+ ++ + + +DL ++KL P FV
Sbjct: 56 IHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVST 102
Score = 58.0 bits (141), Expect = 2e-10
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
G++ G GCA+ PG++VRV +Y WI +
Sbjct: 195 GVIVPGRGCAIPNRPGIFVRVAYYAKWIHKI 225
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 81.9 bits (203), Expect = 5e-19
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLY---CGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
IVGG++ + P+ VSL + + CGGSLI QW L+A HC + +
Sbjct: 1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLR--V 58
Query: 78 IAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQTTFVKP 126
+ Y++Q ++ I H + AD+A+++L+EP ++ V
Sbjct: 59 QLREQHLYYQDQLLP-----VSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHT 109
Score = 57.6 bits (140), Expect = 3e-10
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
G+VSWG GCA PG+Y RV +Y WI
Sbjct: 210 GVVSWGEGCAQPNRPGIYTRVTYYLDWIHHY 240
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 78.8 bits (195), Expect = 7e-18
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGN--LYCGGSLISLQWFLSARHCFVTENLVWNQFNPLII 78
+VGG + N E P++V+L + ++C G+LI+ +W L+A HC I
Sbjct: 1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDR------RNIR--IK 52
Query: 79 AGSIYRNYKEQKRQPQLNEIALI------YWHSDADLAMVKLKEPFRQTTFVKPL 127
G +N + + Q ++ D D+ +++L+ P +T + P+
Sbjct: 53 LGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPV 107
Score = 55.3 bits (134), Expect = 2e-09
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 180 GIVSWGI-GCAL-GYPGVYVRVDHYDPWIQSV-KNN 212
GIV+ G C P VY +V Y+ WIQS+ N
Sbjct: 192 GIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 78.4 bits (194), Expect = 7e-18
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAG 80
IVGGR P P++VSL L G +CG +LI+ + +SA HC N+ ++ G
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNV----RAVRVVLG 56
Query: 81 SIYRNYKEQKRQPQLNEIALIYWHS------DADLAMVKLKEPFRQTTFVKPL 127
+ + +E R Q+ + I+ + D+ +++L V+
Sbjct: 57 AHNLSRREPTR--QVFAVQRIFENGYDPVNLLNDIVILQLNGSATINANVQVA 107
Score = 52.5 bits (127), Expect = 1e-08
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 180 GIVSWG-IGCALG-YPGVYVRVDHYDPWIQSV 209
GI S+ GCA G YP + V + WI S+
Sbjct: 185 GIASFVRGGCASGLYPDAFAPVAQFVNWIDSI 216
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 78.3 bits (194), Expect = 7e-18
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 32/123 (26%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY---GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
I+GG + P PY+ L ++ CGG LI + L+A HC+
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCW-------------- 46
Query: 78 IAGSIYR------NYKEQKRQPQLNEIALIYWHSD-------ADLAMVKLKEPFRQTTFV 124
GS N KEQ+ Q + H D+ +++L+ ++T V
Sbjct: 47 --GSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAV 104
Query: 125 KPL 127
+PL
Sbjct: 105 QPL 107
Score = 54.8 bits (133), Expect = 3e-09
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 180 GIVSWGIGCALGYPGVYVRVDHYDPWIQSV 209
GIVS+G + P +V + WI+
Sbjct: 195 GIVSYGRNNGM-PPRACTKVSSFVHWIKKT 223
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 80.0 bits (197), Expect = 2e-17
Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 13/119 (10%)
Query: 18 GGRIVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
G + + P+ V++ C G+LIS QW L+A HCF N + +
Sbjct: 221 GVGNMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGN---DHSLWRV 277
Query: 78 IAGSIYRNYKEQ----------KRQPQLNEIALIYWHSDADLAMVKLKEPFRQTTFVKP 126
G + ++ + I D+A++KL + + +T +P
Sbjct: 278 NVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARP 336
Score = 47.7 bits (113), Expect = 1e-06
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 166 GIVSWGI-----GCALGYPGIVSWGIGCALGYPGVYVRVDHYDPWIQSV 209
G+VSWG+ G A + ++ + PW++
Sbjct: 452 GLVSWGLYNPCLGSADKNSRKRAPRSKVP-PPRDFHINLFRMQPWLRQH 499
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 77.7 bits (192), Expect = 2e-17
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 19/118 (16%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLY---CGGSLISLQWFLSARHCFVTENLVWNQFNPLI 77
++GG + +PGE P+ +S + CG SL+S LSA HC + ++ N +
Sbjct: 1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCV--DGVLPNNIR--V 56
Query: 78 IAGSIYRNYKEQKRQPQLNEIALIYWHS---------DADLAMVKLKEPFRQTTFVKP 126
IAG ++ Q + H D+A++ L ++
Sbjct: 57 IAGLWQQSDTS---GTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQA 111
Score = 51.5 bits (124), Expect = 4e-08
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 180 GIVSW----GIGCAL-GYPGVYVRVDHYDPWIQS 208
G+ SW G+G L YP VY RV Y WI
Sbjct: 206 GVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 77.2 bits (191), Expect = 3e-17
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 21/119 (17%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL----YCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
+VGG + P +SL CGG+LI W ++A HC L +
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD-RELTFR----- 54
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH---------SDADLAMVKLKEPFRQTTFVKP 126
++ G N Q + I H + D+A+++L + ++V+
Sbjct: 55 VVVGEHNLNQNNG--TEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQL 111
Score = 51.8 bits (125), Expect = 3e-08
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 180 GIVSWG--IGCAL-GYPGVYVRVDHYDPWIQSV 209
G+ S+ +GC + P V+ RV Y WI +V
Sbjct: 204 GVTSFVSRLGCNVTRKPTVFTRVSAYISWINNV 236
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 76.0 bits (188), Expect = 5e-17
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 33/124 (26%)
Query: 21 IVGGRDVNPGEVPYIVSLSLY----GNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
I+GG +++P PY+ ++CGG L+ ++ L+A HC
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK------------- 47
Query: 77 IIAGSIYR------NYKEQKRQPQLNEIALIYWHSD-------ADLAMVKLKEPFRQTTF 123
G N K ++ Q+ +A H D D+ ++KL ++T
Sbjct: 48 ---GRSMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRA 104
Query: 124 VKPL 127
V+PL
Sbjct: 105 VRPL 108
Score = 53.7 bits (130), Expect = 6e-09
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 180 GIVSWGIGCALGYPGVYVRVDHYDPWIQSVKNN 212
GIVS+G P V+ RV + WI+ +
Sbjct: 196 GIVSYGQTDG-SAPQVFTRVLSFVSWIKKTMKH 227
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 75.3 bits (186), Expect = 2e-16
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 18/125 (14%)
Query: 13 FKIDIGGRIVGGRDVNPGEVPYIVSL----SLYGNLYCGGSLISLQWFLSARHCFVTENL 68
F+ ++ R+VGG D P P+ +SL CGG+LI+ L+A HC L
Sbjct: 6 FQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISN-TL 64
Query: 69 VWNQFNPLIIAGSIYRNYKEQKRQPQLNEIALIYWH-------SDADLAMVKLKEPFRQT 121
+ + G +++ + I+ H D+A++KL E
Sbjct: 65 TYR-----VALGKNNLEVEDEAGS-LYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELG 118
Query: 122 TFVKP 126
++
Sbjct: 119 DTIQV 123
Score = 51.1 bits (123), Expect = 5e-08
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 180 GIVSWGIG--CAL-GYPGVYVRVDHYDPWIQSV 209
GIVS+G G C P V+ RV Y WI
Sbjct: 216 GIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQK 248
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 74.9 bits (185), Expect = 2e-16
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 21/119 (17%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNL----YCGGSLISLQWFLSARHCFVTENLVWNQFNPL 76
+VGGR P P+ +SL CGGSLI W ++A HC + W
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSAR-TWR----- 54
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH---------SDADLAMVKLKEPFRQTTFVKP 126
++ G N E K Q+ + ++ H D+A+++L + V+
Sbjct: 55 VVLGEHNLNTNEGKE--QIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQL 111
Score = 51.4 bits (124), Expect = 4e-08
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 180 GIVSW--GIGCAL-GYPGVYVRVDHYDPWIQSV 209
G+ S+ GC P V+ RV Y W+ +
Sbjct: 203 GVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 72.3 bits (178), Expect = 1e-15
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 19/116 (16%)
Query: 24 GRDVNPGEVPYIVSLSLYGNL----YCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIA 79
G D P + VSL + CGGSLI+ W ++A HC T + + ++
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST-SRTYQ-----VVL 55
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWH---------SDADLAMVKLKEPFRQTTFVKP 126
G R+ E Q ++ H D+A+VKL + V+
Sbjct: 56 GEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQL 111
Score = 51.5 bits (124), Expect = 3e-08
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 180 GIVSW--GIGCAL-GYPGVYVRVDHYDPWIQS-VKNN 212
G+ S+ GC P V+ RV + WI + +N
Sbjct: 204 GVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIASN 240
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 71.1 bits (175), Expect = 4e-15
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 16/117 (13%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPL-IIA 79
I+GG+ G P+ V +++G GG+L+ +W L+A H + L +
Sbjct: 1 IIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58
Query: 80 GSIYRNYKEQKRQPQLNEIALIYWHS----------DADLAMVKLKEPFRQTTFVKP 126
G + + I + H + D+A+++L+ + P
Sbjct: 59 GHTNVEELM---KLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLP 112
Score = 49.6 bits (119), Expect = 2e-07
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 15/44 (34%)
Query: 166 GIVSWGIGCALGYPGIVSWGIGCALGYPGVYVRVDHYDPWIQSV 209
GIVSWGIGC+ G G Y +V +Y WI+
Sbjct: 209 GIVSWGIGCSRG---------------YGFYTKVLNYVDWIKKE 237
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 72.2 bits (177), Expect = 5e-15
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 18/126 (14%)
Query: 17 IGGRIVGGRDV-NPGEVPYIVSLSLYGNL--------YCGGSLISLQWFLSARHCFVTEN 67
+ +I G + GE P++V++ + CGGSLI+ L+ HC +
Sbjct: 126 LDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQ 185
Query: 68 LVWNQFNPLIIAGSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFRQ 120
+ I AG ++++ Q +I + HS D+A++ L P Q
Sbjct: 186 SNLDAI--KIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQ 243
Query: 121 TTFVKP 126
+
Sbjct: 244 ADNIGT 249
Score = 61.4 bits (149), Expect = 3e-11
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
GIV+WGIGC PGVY V H+ WI
Sbjct: 351 GIVAWGIGCGDENVPGVYANVAHFRNWIDQE 381
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP:
b.47.1.2 PDB: 2kai_A 1hia_A
Length = 80
Score = 65.2 bits (160), Expect = 2e-14
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 21 IVGGRDVNPGEVPYIVSLSLYGNLYCGGSLISLQWFLSARHCF 63
I+GGR+ P+ V++ Y + CGG L++ +W L+A HC
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCK 43
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 68.9 bits (168), Expect = 1e-13
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 20 RIVGGRDVNPGEVPYIVSL-SLYGNLYCGGSLISLQWFLSARHCFVTENLV--WNQFNPL 76
R+VGG +P P+ VSL + +G +CGG+LIS +W L+A HC +
Sbjct: 561 RVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYK----- 615
Query: 77 IIAGSIYRNYKEQKRQPQLNEIALIYWH-SDADLAMVKLKEPFRQTTFVKP 126
+I G+ E Q E++ ++ + D+A++KL P T V P
Sbjct: 616 VILGAHQEVNLEPHV--QEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIP 664
Score = 56.2 bits (135), Expect = 2e-09
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV-KNN 212
G+ SWG+GCA PGVYVRV + WI+ V +NN
Sbjct: 757 GVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMRNN 791
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 68.0 bits (166), Expect = 2e-13
Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 23/124 (18%)
Query: 18 GGRIVGGRDVNPGEVPYIVSLSLY----GNLYCGGSLISLQWFLSARHCFVTENLV---- 69
G + + + P+ +S+ G+ C G+++S + L+A HCF ++
Sbjct: 212 GMVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIK 271
Query: 70 -----WNQFNPL--IIAGSIYRNYKEQKRQPQLNEIALIYWHSDADLAMVKLKEPFRQTT 122
+ + ++ + NY ++ I D D+A++KLK +
Sbjct: 272 VSVGGEKRDLEIEVVL---FHPNYNINGKKEA-----GIPEFYDYDVALIKLKNKLKYGQ 323
Query: 123 FVKP 126
++P
Sbjct: 324 TIRP 327
Score = 51.8 bits (124), Expect = 5e-08
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 166 GIVSWGIGCALGYPGIVSWGIGCALGYPGVYVRVDHYDPWIQSVKNNGD 214
G++SWG+ ++ + PW++ + D
Sbjct: 448 GVISWGVVDVCKNQKRQK---QVPAHARDFHINLFQVLPWLKEKLQDED 493
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 65.3 bits (159), Expect = 1e-12
Identities = 41/274 (14%), Positives = 67/274 (24%), Gaps = 95/274 (34%)
Query: 20 RIVGGRDVNPGEVPYIVSL----SLYGNLYCGGSLISLQWFLSARHCFVTENLV------ 69
R+ G +V P++ L CGG++IS ++ L+A HC
Sbjct: 118 RVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRL 177
Query: 70 --WNQFNPLIIAGSIYRNYKEQKRQPQLNEIALIYWHSD-------ADLAMVKLKEPFRQ 120
K+ I H D+A++KL
Sbjct: 178 GEHRISTE--EDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPF 235
Query: 121 TTFVKPLDYYTARETNYI-----NDVLSKTDRSEMSIVSGFGVTFQRDKDG--------I 167
+KP I +++ K ++ V+G+G T +
Sbjct: 236 QKHIKP-----------ICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPL 284
Query: 168 VSWGIGCALGYPGIVSWGIGCALGYPG--------------------------------- 194
C+ Y V C G
Sbjct: 285 QPRSA-CSQAYRRAVPLSQLCV-GGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIV 342
Query: 195 --------------VYVRVDHYDPWIQS-VKNNG 213
+Y V Y WI + +NG
Sbjct: 343 SQGVVTCGQISLPGLYTNVGEYVQWITDTMASNG 376
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 65.5 bits (159), Expect = 1e-12
Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 18 GGRIVGGRDVNPGEVPYIVSLSLY----GNLYCGGSLISLQWFLSARHCFVTENLVWNQF 73
G + + + P+ +S+ G+ C G+++S + L+A HCF ++ +
Sbjct: 454 GMVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDD---KEH 510
Query: 74 NPLIIAGSIYRNYKEQK--RQPQLNEIALIYWHS----DADLAMVKLKEPFRQTTFVKP 126
+ + G R+ + + P N D D+A++KLK + ++P
Sbjct: 511 SIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRP 569
Score = 52.8 bits (126), Expect = 3e-08
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 166 GIVSWGIGCALGYPGIVSWGIGCALGYPGVYVRVDHYDPWIQSVKNNGD 214
G++SWG+ ++ + PW++ + D
Sbjct: 690 GVISWGVVDVCKNQKRQK---QVPAHARDFHINLFQVLPWLKEKLQDED 735
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 58.3 bits (142), Expect = 1e-11
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 180 GIVSWGIGCAL-GYPGVYVRVDHYDPWIQSV 209
GIVSWG PGVY RV W+Q
Sbjct: 63 GIVSWGSSTCSTSTPGVYARVTALVNWVQQT 93
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 52.9 bits (128), Expect = 4e-09
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 180 GIVSWGIG-CAL-GYPGVYVRVDHYDPWIQSV 209
GI SWG C P +Y ++ Y WI
Sbjct: 116 GITSWGHTPCGSANKPSIYTKLIFYLDWIDDT 147
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 46.5 bits (110), Expect = 2e-06
Identities = 32/215 (14%), Positives = 52/215 (24%), Gaps = 25/215 (11%)
Query: 21 IVGGRD-----VNPGEVPYIVSLSLY-GNLYCGGSLISLQWFLSARHCFVTENLVWNQFN 74
+V G D N PY + G C G+LI+ L+ HC
Sbjct: 1 VVIGDDGRTKVANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAK 60
Query: 75 PLIIAGSIYRNYKEQKRQPQ---LNEIALIYWHSDADLAMVKLKEPFRQTTFVKPLDYYT 131
+ G + + S D A++K T + + T
Sbjct: 61 GSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSIRQVT 120
Query: 132 ARETNYIN------DVLSKTDRSEMSIVSGFGVTFQRDKDGIVSWGIGCALGYP------ 179
I D + T + +SG + G
Sbjct: 121 NLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNLAYYTIDTFSGNSGSAMLDQNQ 180
Query: 180 ---GIVSWGIGCALGYPGVYVRVDHYDPWIQSVKN 211
G+ + G G + +I K
Sbjct: 181 QIVGVHNAGYSNGTINGGPKATAAFVE-FINYAKA 214
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 34.6 bits (78), Expect = 0.017
Identities = 24/179 (13%), Positives = 51/179 (28%), Gaps = 22/179 (12%)
Query: 31 EVPYIVSLSLYGNLYCGGSLIS------LQWFLSARHCFVTENLVWNQFNPLIIAGSIYR 84
+ + + S G L C GSL++ +FL+A HC + +
Sbjct: 21 IIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTC 80
Query: 85 NYKEQKRQPQ---------LNEIALIYWHSDADLAMVKLKEPFRQTTFVKPLDYYTARET 135
+ + ++ +D +++L + + +
Sbjct: 81 RAPNTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAANPAFNLFWAGWDRRDQN 140
Query: 136 NYINDVLSKTDRSEMSIVSGFGVTFQRDKDGIVSWGIGCALGYPGIVSWGIGCALGYPG 194
+ + +E I + V+WG G + V W + PG
Sbjct: 141 YPGAIAIHHPNVAEKRI------SNSTSPTSFVAWGGGAGTTH-LNVQWQPSGGVTEPG 192
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 32.1 bits (72), Expect = 0.12
Identities = 24/202 (11%), Positives = 59/202 (29%), Gaps = 27/202 (13%)
Query: 21 IVGGRD-----VNPGEVPY-----IVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVW 70
++ + + Y I + G G ++ L+ +H +
Sbjct: 1 VILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDP 60
Query: 71 NQFNPLIIAGSIYRNYKEQKRQPQLNEIALIYWHSDADLAMVKLKEPFRQTTFVKPLDYY 130
+ + ++ + + + DLA+VK + + +
Sbjct: 61 H-----ALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPA 115
Query: 131 TARETNYINDVLSKTDRSEMSIVSGF----GVTFQRDKDGIVSWGIGCALGYPGIVSWG- 185
T ++T ++ V+G+ V + G +++ G A+ Y + G
Sbjct: 116 TMSNN-------AETQTNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQYDLSTTGGN 168
Query: 186 IGCALGYPGVYVRVDHYDPWIQ 207
G + V H+
Sbjct: 169 SGSPVFNEKNEVIGIHWGGVPN 190
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four
helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1
PDB: 1k30_A
Length = 367
Score = 31.3 bits (70), Expect = 0.26
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 83 YRNYKE---QKRQPQLNEIALIYWHSDADLAMVKLKEPFRQTTF----VKPLDYY 130
Y+NY+ + P+ +EI L D ++ +++PF ++ +P DYY
Sbjct: 41 YQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYY 95
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 29.2 bits (65), Expect = 1.1
Identities = 13/100 (13%), Positives = 30/100 (30%), Gaps = 5/100 (5%)
Query: 32 VPYIVSLSLYGNLYCGGSLISLQWFLSARHCFVTENLVWNQFNPLIIAGSIYRNYKEQKR 91
V YI + G G ++ L+ +H + + + ++
Sbjct: 22 VTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPH-----ALKAFPSAINQDNYP 76
Query: 92 QPQLNEIALIYWHSDADLAMVKLKEPFRQTTFVKPLDYYT 131
+ + + DLA+VK + + + T
Sbjct: 77 NGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPAT 116
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 29.2 bits (65), Expect = 1.3
Identities = 21/107 (19%), Positives = 30/107 (28%), Gaps = 46/107 (42%)
Query: 67 NLVWNQFNPLIIAGSIYRNYKEQKRQPQLNEIALIYWHS-------DADLAMVKLKEPFR 119
NL +F + G N+I H+ + D +VK KE +
Sbjct: 85 NLCLTEFENCYLEG---------------NDI-----HALAAKLLQENDTTLVKTKELIK 124
Query: 120 QTTFVKPLDYYTARETNYINDVLSKTDRS---------EMSIVSGFG 157
Y TAR K S +V+ FG
Sbjct: 125 N--------YITARIM--AKRPFDKKSNSALFRAVGEGNAQLVAIFG 161
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia
coli} SCOP: a.8.4.1 b.130.1.1
Length = 227
Score = 27.1 bits (61), Expect = 4.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 158 VTFQRDKDGIVS 169
VTFQ D DG++S
Sbjct: 83 VTFQVDADGLLS 94
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 26.9 bits (60), Expect = 6.8
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 3/27 (11%)
Query: 45 YCGGSLISLQWFLSARHCFVTENLVWN 71
CG S LQ A + E VW
Sbjct: 138 LCGPS---LQQHCEAWGASLPEAQVWG 161
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.140 0.439
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,753,321
Number of extensions: 219991
Number of successful extensions: 988
Number of sequences better than 10.0: 1
Number of HSP's gapped: 742
Number of HSP's successfully gapped: 193
Length of query: 238
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 147
Effective length of database: 4,160,982
Effective search space: 611664354
Effective search space used: 611664354
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.2 bits)