BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy43
(64 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307184090|gb|EFN70625.1| Ras-related protein Rab-39B [Camponotus floridanus]
Length = 218
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/55 (89%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|332376587|gb|AEE63433.1| unknown [Dendroctonus ponderosae]
Length = 218
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEVSDPTVGVDFFARLIEVKDG 56
>gi|357624584|gb|EHJ75308.1| hypothetical protein KGM_08302 [Danaus plexippus]
Length = 222
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
VDP+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFAR++ ++DG
Sbjct: 2 VDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEVQDG 56
>gi|229487390|emb|CAY54157.1| unnamed protein product [Heliconius melpomene]
gi|229487399|emb|CAY54175.1| unnamed protein product [Heliconius melpomene]
gi|443429460|gb|AGC92744.1| ras-related protein rab-39b-like protein [Heliconius erato]
Length = 222
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
VDP+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFAR++ ++DG
Sbjct: 2 VDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEVQDG 56
>gi|340709811|ref|XP_003393494.1| PREDICTED: ras-related protein Rab-39B-like [Bombus terrestris]
gi|350410358|ref|XP_003489019.1| PREDICTED: ras-related protein Rab-39B-like [Bombus impatiens]
Length = 218
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|322785382|gb|EFZ12055.1| hypothetical protein SINV_03176 [Solenopsis invicta]
gi|332019048|gb|EGI59580.1| Ras-related protein Rab-39B [Acromyrmex echinatior]
Length = 218
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|307192501|gb|EFN75689.1| Ras-related protein Rab-39B [Harpegnathos saltator]
Length = 218
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|91093509|ref|XP_969295.1| PREDICTED: similar to ras-related protein Rab-39B, putative
[Tribolium castaneum]
gi|270002676|gb|EEZ99123.1| hypothetical protein TcasGA2_TC005229 [Tribolium castaneum]
Length = 218
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|66500451|ref|XP_623117.1| PREDICTED: ras-related protein Rab-39A [Apis mellifera]
Length = 218
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|380027163|ref|XP_003697300.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B-like
[Apis florea]
Length = 218
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|156554894|ref|XP_001600275.1| PREDICTED: ras-related protein Rab-39B-like [Nasonia vitripennis]
Length = 218
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|195398983|ref|XP_002058100.1| GJ15895 [Drosophila virilis]
gi|194150524|gb|EDW66208.1| GJ15895 [Drosophila virilis]
Length = 218
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLK+FTDGKFAE+SDPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDG 56
>gi|195133292|ref|XP_002011073.1| GI16205 [Drosophila mojavensis]
gi|193907048|gb|EDW05915.1| GI16205 [Drosophila mojavensis]
Length = 218
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLK+FTDGKFAE+SDPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDG 56
>gi|383861916|ref|XP_003706430.1| PREDICTED: ras-related protein Rab-39B-like [Megachile rotundata]
Length = 218
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLL+YFTDGKFAE+SDPTVGVDFFARL+ ++DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLRYFTDGKFAELSDPTVGVDFFARLIEVKDG 56
>gi|24640395|ref|NP_572405.2| Rab39, isoform A [Drosophila melanogaster]
gi|386763998|ref|NP_001245568.1| Rab39, isoform B [Drosophila melanogaster]
gi|194896933|ref|XP_001978562.1| GG19656 [Drosophila erecta]
gi|195353515|ref|XP_002043250.1| GM17535 [Drosophila sechellia]
gi|195480386|ref|XP_002101243.1| GE15730 [Drosophila yakuba]
gi|7290828|gb|AAF46271.1| Rab39, isoform A [Drosophila melanogaster]
gi|190650211|gb|EDV47489.1| GG19656 [Drosophila erecta]
gi|194127348|gb|EDW49391.1| GM17535 [Drosophila sechellia]
gi|194188767|gb|EDX02351.1| GE15730 [Drosophila yakuba]
gi|201065973|gb|ACH92396.1| FI07418p [Drosophila melanogaster]
gi|383293267|gb|AFH07282.1| Rab39, isoform B [Drosophila melanogaster]
Length = 218
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+F+YQFRLILIGDSTVGKSSLLK+FTDGKFAE+SDPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDG 56
>gi|195447882|ref|XP_002071412.1| GK25784 [Drosophila willistoni]
gi|194167497|gb|EDW82398.1| GK25784 [Drosophila willistoni]
Length = 219
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+F+YQFRLILIGDSTVGKSSLLK+FTDGKFAE+SDPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDG 56
>gi|17945831|gb|AAL48962.1| RE37651p [Drosophila melanogaster]
Length = 218
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+F+YQFRLILIGDSTVGKSSLLK+FTDGKFAE+SDPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDG 56
>gi|194763507|ref|XP_001963874.1| GF21025 [Drosophila ananassae]
gi|190618799|gb|EDV34323.1| GF21025 [Drosophila ananassae]
Length = 218
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+F+YQFRLILIGDSTVGKSSLLK+FTDGKFAE+SDPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDG 56
>gi|125982783|ref|XP_001355157.1| GA11442 [Drosophila pseudoobscura pseudoobscura]
gi|195163778|ref|XP_002022726.1| GL14723 [Drosophila persimilis]
gi|54643470|gb|EAL32214.1| GA11442 [Drosophila pseudoobscura pseudoobscura]
gi|194104749|gb|EDW26792.1| GL14723 [Drosophila persimilis]
Length = 218
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+F+YQFRLILIGDSTVGKSSLLK+FTDGKFAE+SDPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDG 56
>gi|195041747|ref|XP_001991308.1| GH12582 [Drosophila grimshawi]
gi|193901066|gb|EDV99932.1| GH12582 [Drosophila grimshawi]
Length = 218
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 54/55 (98%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLL++FTDGKFAE++DPTVGVDFFARL+ M+DG
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLQFFTDGKFAELADPTVGVDFFARLIEMKDG 56
>gi|170044398|ref|XP_001849836.1| ras-related protein Rab-39B [Culex quinquefasciatus]
gi|167867568|gb|EDS30951.1| ras-related protein Rab-39B [Culex quinquefasciatus]
Length = 219
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFR ILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFA L+ ++DG
Sbjct: 2 VEPIFDYQFRHILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHLIEVKDG 56
>gi|157120330|ref|XP_001653610.1| ras-related protein Rab-39B, putative [Aedes aegypti]
gi|108874991|gb|EAT39216.1| AAEL008959-PA [Aedes aegypti]
Length = 219
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFR ILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFA L+ ++DG
Sbjct: 2 VEPIFDYQFRHILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHLIEVKDG 56
>gi|321475470|gb|EFX86433.1| hypothetical protein DAPPUDRAFT_222118 [Daphnia pulex]
Length = 214
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/55 (80%), Positives = 53/55 (96%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFR+I+IG+STVGKSSLLKYFTDG+FAE+SDPTVGVDFFARL+ + DG
Sbjct: 2 VEPIFDYQFRIIIIGNSTVGKSSLLKYFTDGRFAEVSDPTVGVDFFARLLQVEDG 56
>gi|347963812|ref|XP_310666.5| AGAP000433-PA [Anopheles gambiae str. PEST]
gi|347963814|ref|XP_003436992.1| AGAP000433-PB [Anopheles gambiae str. PEST]
gi|333467022|gb|EAA06272.6| AGAP000433-PA [Anopheles gambiae str. PEST]
gi|333467023|gb|EGK96454.1| AGAP000433-PB [Anopheles gambiae str. PEST]
Length = 219
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 51/55 (92%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFR ILIGDSTVGKSSLLKYFTDGKFAE+SDPTVGVDFFA L+ + DG
Sbjct: 2 VEPMFDYQFRHILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHLIEVMDG 56
>gi|443734856|gb|ELU18712.1| hypothetical protein CAPTEDRAFT_6646 [Capitella teleta]
Length = 214
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/55 (81%), Positives = 52/55 (94%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FDYQFRLILIGDSTVGKSSLLKYFTDGKF+E+ DPTVGVDF+ARLV ++ G
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFSEMCDPTVGVDFYARLVGVKPG 56
>gi|225713282|gb|ACO12487.1| Ras-related protein Rab-39B [Lepeophtheirus salmonis]
Length = 254
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/57 (75%), Positives = 52/57 (91%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ +DP F+YQFRLILIGDSTVGKSSLLKYFTDG F E+SDPTVG+DFFA+L+ ++DG
Sbjct: 10 IPIDPTFEYQFRLILIGDSTVGKSSLLKYFTDGSFGEVSDPTVGIDFFAKLLPVKDG 66
>gi|242005703|ref|XP_002423702.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506878|gb|EEB10964.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 222
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/59 (81%), Positives = 52/59 (88%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAE----ISDPTVGVDFFARLVTMRDG 57
V+ LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAE +SDPTVGVDFFARL+ + DG
Sbjct: 2 VESLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEVTSSVSDPTVGVDFFARLIVLDDG 60
>gi|225718090|gb|ACO14891.1| Ras-related protein Rab-39B [Caligus clemensi]
Length = 255
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
+ +DP FDYQFRLILIGDSTVGKSSLL+YFTDG F E+SDPTVG+DFFA+L+ ++DG +
Sbjct: 11 IPIDPTFDYQFRLILIGDSTVGKSSLLRYFTDGSFGEVSDPTVGIDFFAKLLPVKDGRVM 70
Query: 61 FCFL 64
L
Sbjct: 71 KLLL 74
>gi|268529446|ref|XP_002629849.1| C. briggsae CBR-RAB-39 protein [Caenorhabditis briggsae]
Length = 229
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
PLF YQ+RLI+IGDSTVGKSSLL+YFT+GK AEISDPTVGVDF+AR++ +R G
Sbjct: 12 PLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPG 64
>gi|308469805|ref|XP_003097139.1| CRE-RAB-39 protein [Caenorhabditis remanei]
gi|308240608|gb|EFO84560.1| CRE-RAB-39 protein [Caenorhabditis remanei]
Length = 229
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
PLF YQ+RLI+IGDSTVGKSSLL+YFT+GK AEISDPTVGVDF+AR++ +R G
Sbjct: 12 PLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPG 64
>gi|25153277|ref|NP_495984.2| Protein RAB-39 [Caenorhabditis elegans]
gi|19571635|emb|CAA87774.2| Protein RAB-39 [Caenorhabditis elegans]
Length = 229
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
PLF YQ+RLI+IGDSTVGKSSLL+YFT+GK AEISDPTVGVDF+AR++ +R G
Sbjct: 12 PLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPG 64
>gi|225708794|gb|ACO10243.1| Ras-related protein Rab-39B [Caligus rogercresseyi]
Length = 250
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
+ +DP F YQFRLILIGDSTVGKSSLL+YFTDG F E+SDPTVG+DFFA+L+ ++DG +
Sbjct: 10 IPIDPTFRYQFRLILIGDSTVGKSSLLRYFTDGSFGEVSDPTVGIDFFAKLLPVKDGNIM 69
Query: 61 FCFL 64
L
Sbjct: 70 KLLL 73
>gi|405969854|gb|EKC34800.1| Ras-related protein Rab-39B [Crassostrea gigas]
Length = 214
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 50/55 (90%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
V+P+FD+QFRLILIGDSTVGKSSLLKYFT+GKF + DPTVGVDF+ARL+ ++ G
Sbjct: 2 VEPIFDFQFRLILIGDSTVGKSSLLKYFTEGKFTDECDPTVGVDFYARLIEVKQG 56
>gi|341902814|gb|EGT58749.1| hypothetical protein CAEBREN_05163 [Caenorhabditis brenneri]
Length = 229
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/53 (75%), Positives = 49/53 (92%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
PLF YQ+RLI+IGDSTVGKSSLL+YFT+G+ AEISDPTVGVDF+AR++ +R G
Sbjct: 12 PLFHYQYRLIVIGDSTVGKSSLLRYFTEGRMAEISDPTVGVDFYARMIELRPG 64
>gi|193580194|ref|XP_001944122.1| PREDICTED: ras-related protein Rab-39B-like isoform 1
[Acyrthosiphon pisum]
Length = 220
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/54 (77%), Positives = 47/54 (87%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +FDYQFRLILIGDSTVGKSSLLK+F DGKF E+SDPTVGVDFFAR + + G
Sbjct: 3 DLMFDYQFRLILIGDSTVGKSSLLKFFNDGKFVEVSDPTVGVDFFARTIQIPSG 56
>gi|328722733|ref|XP_003247652.1| PREDICTED: ras-related protein Rab-39B-like isoform 2
[Acyrthosiphon pisum]
Length = 216
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/54 (77%), Positives = 47/54 (87%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +FDYQFRLILIGDSTVGKSSLLK+F DGKF E+SDPTVGVDFFAR + + G
Sbjct: 3 DLMFDYQFRLILIGDSTVGKSSLLKFFNDGKFVEVSDPTVGVDFFARTIQIPSG 56
>gi|346473283|gb|AEO36486.1| hypothetical protein [Amblyomma maculatum]
Length = 217
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 49/53 (92%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
V+P+FDYQFRLILIGDSTVGKS+LLK FTDGKF +I DPTVGVDFFARL+ ++
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSTLLKAFTDGKFHDICDPTVGVDFFARLIEVK 54
>gi|427778905|gb|JAA54904.1| Putative rab39 [Rhipicephalus pulchellus]
Length = 256
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
V+P+FDYQFRLILIGDSTVGKS+LLK FTDGKF ++ DPTVGVDFFARL+ ++
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSTLLKAFTDGKFHDVCDPTVGVDFFARLIEVK 54
>gi|427787375|gb|JAA59139.1| Putative rab39 [Rhipicephalus pulchellus]
Length = 217
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
V+P+FDYQFRLILIGDSTVGKS+LLK FTDGKF ++ DPTVGVDFFARL+ ++
Sbjct: 2 VEPIFDYQFRLILIGDSTVGKSTLLKAFTDGKFHDVCDPTVGVDFFARLIEVK 54
>gi|241675854|ref|XP_002400245.1| RAS-related protein, putative [Ixodes scapularis]
gi|215504210|gb|EEC13704.1| RAS-related protein, putative [Ixodes scapularis]
Length = 149
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 49/53 (92%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
V+P+FDYQFRLILIGDSTVGKS+LLK FTDGKF +I DPTVGVDFFARL+ ++
Sbjct: 34 VEPIFDYQFRLILIGDSTVGKSTLLKSFTDGKFHDICDPTVGVDFFARLIEVK 86
>gi|260808596|ref|XP_002599093.1| hypothetical protein BRAFLDRAFT_114662 [Branchiostoma floridae]
gi|229284369|gb|EEN55105.1| hypothetical protein BRAFLDRAFT_114662 [Branchiostoma floridae]
Length = 219
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/54 (75%), Positives = 47/54 (87%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+P++ YQFRLILIGDSTVGKSSLL+ FTDGKF E SDPTVGVDFFARL+ + G
Sbjct: 3 EPIWLYQFRLILIGDSTVGKSSLLRRFTDGKFIEYSDPTVGVDFFARLMEVEPG 56
>gi|260808582|ref|XP_002599086.1| hypothetical protein BRAFLDRAFT_281466 [Branchiostoma floridae]
gi|229284362|gb|EEN55098.1| hypothetical protein BRAFLDRAFT_281466 [Branchiostoma floridae]
Length = 219
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/54 (75%), Positives = 47/54 (87%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+P++ YQFRLILIGDSTVGKSSLL+ FTDGKF E SDPTVGVDFFARL+ + G
Sbjct: 3 EPIWLYQFRLILIGDSTVGKSSLLRRFTDGKFIEYSDPTVGVDFFARLMEVEPG 56
>gi|402593378|gb|EJW87305.1| hypothetical protein WUBG_01787 [Wuchereria bancrofti]
Length = 229
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P++ YQFR+ILIGDSTVGKSSLL++FT+GK AEI DPTVGVDF+AR+V ++ G
Sbjct: 15 PMYHYQFRVILIGDSTVGKSSLLRHFTEGKCAEICDPTVGVDFYARMVEVKPG 67
>gi|393911351|gb|EFO27290.2| RAB-39 protein [Loa loa]
Length = 251
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P++ YQFR+ILIGDSTVGKSSLL++FT+GK AEI DPTVGVDF+AR+V ++ G
Sbjct: 37 PMYRYQFRVILIGDSTVGKSSLLRHFTEGKCAEICDPTVGVDFYARMVEVKPG 89
>gi|312067515|ref|XP_003136779.1| RAB-39 protein [Loa loa]
Length = 229
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P++ YQFR+ILIGDSTVGKSSLL++FT+GK AEI DPTVGVDF+AR+V ++ G
Sbjct: 15 PMYRYQFRVILIGDSTVGKSSLLRHFTEGKCAEICDPTVGVDFYARMVEVKPG 67
>gi|170590784|ref|XP_001900151.1| Ras-related protein Rab-39A [Brugia malayi]
gi|158592301|gb|EDP30901.1| Ras-related protein Rab-39A, putative [Brugia malayi]
Length = 229
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P++ YQFR+ILIGDSTVGKSSLL++FT+GK AEI DPTVGVDF+AR+V ++ G
Sbjct: 15 PMYRYQFRVILIGDSTVGKSSLLRHFTEGKCAEICDPTVGVDFYARMVEVKPG 67
>gi|390357473|ref|XP_782114.3| PREDICTED: ras-related protein Rab-39B-like [Strongylocentrotus
purpuratus]
Length = 240
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/52 (71%), Positives = 46/52 (88%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++YQFRLIL+GDSTVGKSSLL+ F DGKF E+SDPTVGVDF+ARL+ + G
Sbjct: 29 IWEYQFRLILVGDSTVGKSSLLRRFCDGKFVEVSDPTVGVDFYARLIEVAPG 80
>gi|291225826|ref|XP_002732900.1| PREDICTED: RAB39B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 221
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/52 (75%), Positives = 45/52 (86%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++YQFRLILIGDSTVGKSSLL+ F DGKF E SDPTVGVDFFARL+ + G
Sbjct: 12 IWEYQFRLILIGDSTVGKSSLLRRFCDGKFVEFSDPTVGVDFFARLLEVSPG 63
>gi|313213136|emb|CBY36994.1| unnamed protein product [Oikopleura dioica]
gi|313234411|emb|CBY24610.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ ++ +QFR+IL+GDSTVGKS+LLK FT+G FAE SDPTVGVDFFAR++ + D
Sbjct: 15 SASAIWSWQFRIILVGDSTVGKSALLKRFTEGSFAETSDPTVGVDFFARVIEIED 69
>gi|22651417|gb|AAL12244.1| Rab39 [Homo sapiens]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|115497388|ref|NP_001069563.1| ras-related protein Rab-39B [Bos taurus]
gi|194228477|ref|XP_001494357.2| PREDICTED: ras-related protein Rab-39B-like [Equus caballus]
gi|301791696|ref|XP_002930817.1| PREDICTED: ras-related protein Rab-39B-like [Ailuropoda
melanoleuca]
gi|311277243|ref|XP_003135565.1| PREDICTED: ras-related protein Rab-39B-like [Sus scrofa]
gi|426257354|ref|XP_004022294.1| PREDICTED: ras-related protein Rab-39B [Ovis aries]
gi|118573268|sp|Q17QU4.1|RB39B_BOVIN RecName: Full=Ras-related protein Rab-39B
gi|109658249|gb|AAI18178.1| RAB39B, member RAS oncogene family [Bos taurus]
gi|281347654|gb|EFB23238.1| hypothetical protein PANDA_021406 [Ailuropoda melanoleuca]
gi|296471117|tpg|DAA13232.1| TPA: ras-related protein Rab-39B [Bos taurus]
gi|431919189|gb|ELK17894.1| Ras-related protein Rab-39B [Pteropus alecto]
gi|440902928|gb|ELR53658.1| Ras-related protein Rab-39B [Bos grunniens mutus]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|121582364|ref|NP_001073492.1| RAB39B, member RAS oncogene family [Danio rerio]
gi|118763672|gb|AAI28659.1| RAB39B, member RAS oncogene family [Danio rerio]
gi|182889234|gb|AAI64823.1| Rab39b protein [Danio rerio]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|148922827|ref|NP_001092211.1| RAB39B, member RAS oncogene family [Danio rerio]
gi|148744698|gb|AAI42805.1| Zgc:165464 protein [Danio rerio]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|47213473|emb|CAF91130.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|25188193|ref|NP_741995.1| ras-related protein Rab-39B [Homo sapiens]
gi|284005012|ref|NP_001164858.1| ras-related protein Rab-39B [Oryctolagus cuniculus]
gi|387762991|ref|NP_001248440.1| ras-related protein Rab-39B [Macaca mulatta]
gi|296236798|ref|XP_002763474.1| PREDICTED: ras-related protein Rab-39B [Callithrix jacchus]
gi|297711485|ref|XP_002832370.1| PREDICTED: ras-related protein Rab-39B [Pongo abelii]
gi|332260636|ref|XP_003279390.1| PREDICTED: ras-related protein Rab-39B [Nomascus leucogenys]
gi|332862067|ref|XP_003317848.1| PREDICTED: ras-related protein Rab-39B [Pan troglodytes]
gi|344306232|ref|XP_003421792.1| PREDICTED: ras-related protein Rab-39B-like [Loxodonta africana]
gi|348552706|ref|XP_003462168.1| PREDICTED: ras-related protein Rab-39B-like [Cavia porcellus]
gi|395861015|ref|XP_003802790.1| PREDICTED: ras-related protein Rab-39B [Otolemur garnettii]
gi|397477274|ref|XP_003809998.1| PREDICTED: ras-related protein Rab-39B [Pan paniscus]
gi|402911919|ref|XP_003918548.1| PREDICTED: ras-related protein Rab-39B [Papio anubis]
gi|403306959|ref|XP_003943983.1| PREDICTED: ras-related protein Rab-39B [Saimiri boliviensis
boliviensis]
gi|426398054|ref|XP_004065217.1| PREDICTED: ras-related protein Rab-39B [Gorilla gorilla gorilla]
gi|27734447|sp|Q96DA2.1|RB39B_HUMAN RecName: Full=Ras-related protein Rab-39B
gi|16307251|gb|AAH09714.1| RAB39B, member RAS oncogene family [Homo sapiens]
gi|21740216|emb|CAD39120.1| hypothetical protein [Homo sapiens]
gi|57209093|emb|CAI41468.1| RAB39B, member RAS oncogene family [Homo sapiens]
gi|117646510|emb|CAL38722.1| hypothetical protein [synthetic construct]
gi|119593032|gb|EAW72626.1| RAB39B, member RAS oncogene family [Homo sapiens]
gi|167045841|gb|ABZ10509.1| RAB39B, member RAS oncogene family (predicted) [Callithrix
jacchus]
gi|217418289|gb|ACK44293.1| RAB39B, member RAS oncogene family (predicted) [Oryctolagus
cuniculus]
gi|261859722|dbj|BAI46383.1| RAB39B, member RAS oncogene family [synthetic construct]
gi|351704267|gb|EHB07186.1| Ras-related protein Rab-39B [Heterocephalus glaber]
gi|355705311|gb|EHH31236.1| hypothetical protein EGK_21125 [Macaca mulatta]
gi|355757848|gb|EHH61373.1| hypothetical protein EGM_19373 [Macaca fascicularis]
gi|380809420|gb|AFE76585.1| ras-related protein Rab-39B [Macaca mulatta]
gi|444510549|gb|ELV09633.1| Ras-related protein Rab-39B [Tupaia chinensis]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|30424726|ref|NP_780331.1| ras-related protein Rab-39B [Mus musculus]
gi|46577034|sp|Q8BHC1.1|RB39B_MOUSE RecName: Full=Ras-related protein Rab-39B
gi|26332977|dbj|BAC30206.1| unnamed protein product [Mus musculus]
gi|26339664|dbj|BAC33503.1| unnamed protein product [Mus musculus]
gi|29747805|gb|AAH50853.1| RAB39B, member RAS oncogene family [Mus musculus]
gi|30851610|gb|AAH52472.1| RAB39B, member RAS oncogene family [Mus musculus]
gi|74141396|dbj|BAE35978.1| unnamed protein product [Mus musculus]
gi|112293041|dbj|BAF02898.1| Rab39B [Mus musculus]
gi|148697273|gb|EDL29220.1| RAB39B, member RAS oncogene family [Mus musculus]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|410989743|ref|XP_004001118.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B
[Felis catus]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|410906827|ref|XP_003966893.1| PREDICTED: ras-related protein Rab-39B-like [Takifugu rubripes]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|348532959|ref|XP_003453973.1| PREDICTED: ras-related protein Rab-39B-like [Oreochromis
niloticus]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|354490303|ref|XP_003507298.1| PREDICTED: ras-related protein Rab-39B-like [Cricetulus griseus]
gi|344236010|gb|EGV92113.1| Ras-related protein Rab-39B [Cricetulus griseus]
Length = 213
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|432895843|ref|XP_004076189.1| PREDICTED: ras-related protein Rab-39B-like [Oryzias latipes]
Length = 213
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|348518962|ref|XP_003447000.1| PREDICTED: ras-related protein Rab-39B-like [Oreochromis
niloticus]
Length = 213
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|432920687|ref|XP_004079986.1| PREDICTED: ras-related protein Rab-39B-like [Oryzias latipes]
Length = 213
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIETG 55
>gi|57526713|ref|NP_998207.1| Ras-related protein Rab-39A [Danio rerio]
gi|38512236|gb|AAH60898.1| Zgc:73061 [Danio rerio]
Length = 213
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 47/55 (85%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+D L+ YQFR+IL+GDSTVGKSSLLK FTDG +++++DPTVGVDF+AR + + G
Sbjct: 1 MDTLWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSIDIEPG 55
>gi|432883714|ref|XP_004074343.1| PREDICTED: ras-related protein Rab-39B-like [Oryzias latipes]
Length = 218
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 47/55 (85%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+D L+ YQFR+IL+GDSTVGKSSLLK FTDG +++++DPTVGVDF+AR + + G
Sbjct: 1 MDALWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPG 55
>gi|301604366|ref|XP_002931827.1| PREDICTED: ras-related protein Rab-39B-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 211
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 45/51 (88%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y+FRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 3 YSYRFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 53
>gi|226468602|emb|CAX69978.1| RAB39, member RAS oncogene family [Schistosoma japonicum]
Length = 224
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
P FDYQFR+I+IGDS VGKSSL+K F +G F+ +SDPT+GVDFF+R V +++ F+
Sbjct: 3 PYFDYQFRVIIIGDSMVGKSSLMKSFVEGNFSPVSDPTIGVDFFSRTVRIQEEVFV 58
>gi|29841194|gb|AAP06207.1| SJCHGC06552 protein [Schistosoma japonicum]
gi|226468600|emb|CAX69977.1| RAB39, member RAS oncogene family [Schistosoma japonicum]
Length = 224
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
P FDYQFR+I+IGDS VGKSSL+K F +G F+ +SDPT+GVDFF+R V +++ F+
Sbjct: 3 PYFDYQFRVIIIGDSMVGKSSLMKSFVEGNFSPVSDPTIGVDFFSRTVRIQEEVFV 58
>gi|348512527|ref|XP_003443794.1| PREDICTED: ras-related protein Rab-39A-like [Oreochromis
niloticus]
Length = 218
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 47/55 (85%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+D L+ YQFR+IL+GDSTVGKSSLLK FTDG +++++DPTVGVDF+AR + + G
Sbjct: 1 MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPG 55
>gi|213511814|ref|NP_001134178.1| Ras-related protein Rab-39B [Salmo salar]
gi|209731240|gb|ACI66489.1| Ras-related protein Rab-39B [Salmo salar]
Length = 216
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 47/55 (85%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+D L+ YQFR+IL+GDSTVGKSSLLK FTDG +++++DPTVGVDF+AR + + G
Sbjct: 1 MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPG 55
>gi|256083955|ref|XP_002578200.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353232719|emb|CCD80074.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 224
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
P FDYQFR+I+IGDS VGKSSL+K F +G F +SDPT+GVDFF+R V +++ F+
Sbjct: 3 PYFDYQFRVIIIGDSMVGKSSLMKSFVEGNFTPVSDPTIGVDFFSRTVRIQEEVFV 58
>gi|410911354|ref|XP_003969155.1| PREDICTED: ras-related protein Rab-39A-like [Takifugu rubripes]
Length = 218
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 47/55 (85%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+D L+ YQFR+IL+GDSTVGKSSLLK FTDG +++++DPTVGVDF+AR + + G
Sbjct: 1 MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPG 55
>gi|126344002|ref|XP_001363573.1| PREDICTED: ras-related protein Rab-39B-like [Monodelphis
domestica]
Length = 213
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 47/55 (85%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+F ++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFPQVSDPTVGVDFFSRLVEIEPG 55
>gi|345807749|ref|XP_003435654.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B,
partial [Canis lupus familiaris]
Length = 210
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
YQFRLI+IGDSTVGKS L++ F +G+FA++SDPTVGVDFF+RLV + G
Sbjct: 4 YQFRLIVIGDSTVGKSCLIRRFXEGRFAQVSDPTVGVDFFSRLVEIEPG 52
>gi|345309482|ref|XP_001514755.2| PREDICTED: ras-related protein Rab-39B-like [Ornithorhynchus
anatinus]
Length = 72
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 55
>gi|47214423|emb|CAG00264.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 44/48 (91%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+D L+ YQFR+IL+GDSTVGKSSLLK FTDG +++++DPTVGVDF+AR
Sbjct: 1 MDILWQYQFRIILLGDSTVGKSSLLKRFTDGVYSDVADPTVGVDFYAR 48
>gi|301604368|ref|XP_002931828.1| PREDICTED: ras-related protein Rab-39B-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 212
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+F + FRLI+IGDSTVGKS L++ FT+G+FA++SDPTVGVDFF+RLV + G
Sbjct: 3 IFKFLFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPG 54
>gi|56754279|gb|AAW25327.1| SJCHGC06553 protein [Schistosoma japonicum]
Length = 135
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
P FDYQFR+I+IGDS VGKSSL+K F +G F+ +SDPT+GVDFF+R V +++ F+
Sbjct: 3 PYFDYQFRVIIIGDSMVGKSSLMKSFVEGNFSPVSDPTIGVDFFSRTVRIQEEVFV 58
>gi|358253639|dbj|GAA53548.1| Ras-related protein Rab-39B [Clonorchis sinensis]
Length = 224
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 44/56 (78%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
P FDYQFRLI+IGDS VGKSS L+ F +G F+ + DPTVGVDF++R+V +R ++
Sbjct: 3 PYFDYQFRLIVIGDSMVGKSSFLRTFVEGNFSNVCDPTVGVDFYSRIVRIRSDKYV 58
>gi|198418201|ref|XP_002127315.1| PREDICTED: similar to RAB39B, member RAS oncogene family isoform
2 [Ciona intestinalis]
Length = 195
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 46/54 (85%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ ++ YQFR++L+GDSTVGKS+LL+ FTDG F E+SDPTVGVDF++RL+ + G
Sbjct: 9 ETIWAYQFRVVLLGDSTVGKSALLRRFTDGCFLEVSDPTVGVDFYSRLIEISPG 62
>gi|198418197|ref|XP_002127260.1| PREDICTED: similar to RAB39B, member RAS oncogene family isoform
1 [Ciona intestinalis]
Length = 217
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 46/54 (85%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ ++ YQFR++L+GDSTVGKS+LL+ FTDG F E+SDPTVGVDF++RL+ + G
Sbjct: 9 ETIWAYQFRVVLLGDSTVGKSALLRRFTDGCFLEVSDPTVGVDFYSRLIEISPG 62
>gi|363732860|ref|XP_420326.3| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B
[Gallus gallus]
Length = 213
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 47/55 (85%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ ++ YQ +LI+IGDSTVGKS L++ FT+G+FA+ISDPTVGVDFF+RLV + G
Sbjct: 1 MEAIWLYQLKLIVIGDSTVGKSCLIRRFTEGRFAQISDPTVGVDFFSRLVEIEPG 55
>gi|29841352|gb|AAP06384.1| similar to GenBank Accession Number AE003441 CG12156 gene product
in Drosophila melanogaster [Schistosoma japonicum]
Length = 123
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 46/56 (82%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
P FDYQFR+I+IGDS VGKSSL+K F +G F+ +SDPT+GVDFF+R V +++ F+
Sbjct: 3 PYFDYQFRVIIIGDSMVGKSSLMKSFVEGNFSPVSDPTIGVDFFSRTVRIQEEVFV 58
>gi|156357542|ref|XP_001624276.1| predicted protein [Nematostella vectensis]
gi|156211042|gb|EDO32176.1| predicted protein [Nematostella vectensis]
Length = 224
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
P + YQFR+ILIGDSTVGKSSLL+ FT+G+F E SDPTVGVDF R++ ++
Sbjct: 3 PKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELK 53
>gi|449665586|ref|XP_002167051.2| PREDICTED: ras-related protein Rab-39B-like [Hydra
magnipapillata]
Length = 224
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 40/48 (83%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
YQFR+ILIGDSTVGKSSLL+ FT+G++ SDPTVGVDF R++ + D
Sbjct: 15 YQFRVILIGDSTVGKSSLLRQFTEGQYIRTSDPTVGVDFHVRVIQISD 62
>gi|395522098|ref|XP_003765077.1| PREDICTED: ras-related protein Rab-39B-like [Sarcophilus
harrisii]
Length = 214
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+D L+ YQFRLIL+GDSTVGKSSLL+ +T+G F + D TVGVDF+ V + G
Sbjct: 1 MDALWQYQFRLILLGDSTVGKSSLLRRYTEGVFVDCMDQTVGVDFYIHFVEVEPG 55
>gi|431907494|gb|ELK11346.1| Cullin-5 [Pteropus alecto]
Length = 873
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|126326678|ref|XP_001371437.1| PREDICTED: ras-related protein Rab-39A-like [Monodelphis
domestica]
Length = 217
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKF----AEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 MEAIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGMLSPACDPTVGVDFFSRLLEIEPG 59
>gi|348553214|ref|XP_003462422.1| PREDICTED: ras-related protein Rab-39A-like [Cavia porcellus]
Length = 217
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKF----AEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWVYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|444723565|gb|ELW64216.1| Ras-related protein Rab-39A [Tupaia chinensis]
Length = 228
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|440899157|gb|ELR50507.1| Ras-related protein Rab-39A, partial [Bos grunniens mutus]
Length = 207
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|157822741|ref|NP_001101618.1| ras-related protein Rab-39A [Rattus norvegicus]
gi|149041681|gb|EDL95522.1| RAB39, member RAS oncogene family (predicted) [Rattus norvegicus]
Length = 217
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 MEAIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|30425356|ref|NP_780771.1| ras-related protein Rab-39A [Mus musculus]
gi|46577035|sp|Q8BHD0.1|RB39A_MOUSE RecName: Full=Ras-related protein Rab-39A; Short=Rab-39
gi|26339718|dbj|BAC33522.1| unnamed protein product [Mus musculus]
gi|26343485|dbj|BAC35399.1| unnamed protein product [Mus musculus]
gi|29436752|gb|AAH49787.1| RAB39, member RAS oncogene family [Mus musculus]
gi|112293039|dbj|BAF02897.1| Rab39A [Mus musculus]
gi|148693854|gb|EDL25801.1| RAB39, member RAS oncogene family [Mus musculus]
Length = 217
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKF----AEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLHSPACDPTVGVDFFSRLLEIEPG 59
>gi|354493410|ref|XP_003508835.1| PREDICTED: ras-related protein Rab-39A-like [Cricetulus griseus]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|300796820|ref|NP_001179759.1| ras-related protein Rab-39A [Bos taurus]
gi|426244473|ref|XP_004016046.1| PREDICTED: ras-related protein Rab-39A [Ovis aries]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|403262879|ref|XP_003923794.1| PREDICTED: ras-related protein Rab-39A [Saimiri boliviensis
boliviensis]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|296216096|ref|XP_002754410.1| PREDICTED: ras-related protein Rab-39A [Callithrix jacchus]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|311263847|ref|XP_003129872.1| PREDICTED: ras-related protein Rab-39A-like [Sus scrofa]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|334328395|ref|XP_001373177.2| PREDICTED: ras-related protein Rab-39B-like [Monodelphis
domestica]
Length = 215
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+D L+ YQFRLIL+GDSTVGKSSLL+ +T+ F + D TVGVDF+ V + G
Sbjct: 1 MDALWQYQFRLILLGDSTVGKSSLLRRYTEDVFVDCLDQTVGVDFYVHFVEVEPG 55
>gi|410971851|ref|XP_003992376.1| PREDICTED: ras-related protein Rab-39A [Felis catus]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|297690125|ref|XP_002822477.1| PREDICTED: ras-related protein Rab-39A [Pongo abelii]
Length = 217
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|395520361|ref|XP_003764303.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39A
[Sarcophilus harrisii]
Length = 220
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKF----AEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 4 MEAIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGMLSPACDPTVGVDFFSRLLEIEPG 62
>gi|1491714|emb|CAA68227.1| rab-related GTP-binding protein [Homo sapiens]
Length = 217
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|344287847|ref|XP_003415663.1| PREDICTED: ras-related protein Rab-39A-like [Loxodonta africana]
Length = 217
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|149716473|ref|XP_001501057.1| PREDICTED: ras-related protein Rab-39A-like [Equus caballus]
Length = 217
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|39930371|ref|NP_059986.1| ras-related protein Rab-39A [Homo sapiens]
gi|109108559|ref|XP_001103335.1| PREDICTED: ras-related protein Rab-39A [Macaca mulatta]
gi|332208110|ref|XP_003253140.1| PREDICTED: ras-related protein Rab-39A [Nomascus leucogenys]
gi|395861427|ref|XP_003802988.1| PREDICTED: ras-related protein Rab-39A-like [Otolemur garnettii]
gi|397516356|ref|XP_003828396.1| PREDICTED: ras-related protein Rab-39A [Pan paniscus]
gi|402895143|ref|XP_003910693.1| PREDICTED: ras-related protein Rab-39A [Papio anubis]
gi|46577701|sp|Q14964.2|RB39A_HUMAN RecName: Full=Ras-related protein Rab-39A; Short=Rab-39
gi|20380206|gb|AAH28064.1| RAB39, member RAS oncogene family [Homo sapiens]
gi|119587504|gb|EAW67100.1| RAB39, member RAS oncogene family [Homo sapiens]
gi|158259399|dbj|BAF85658.1| unnamed protein product [Homo sapiens]
gi|325464161|gb|ADZ15851.1| RAB39, member RAS oncogene family [synthetic construct]
Length = 217
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|291383947|ref|XP_002708544.1| PREDICTED: RAB39, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 217
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|196009684|ref|XP_002114707.1| hypothetical protein TRIADDRAFT_6667 [Trichoplax adhaerens]
gi|190582769|gb|EDV22841.1| hypothetical protein TRIADDRAFT_6667 [Trichoplax adhaerens]
Length = 188
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 36/44 (81%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+ YQ R ILIGDSTVGKSSLL+ F+DGKF + DPTVGVDF AR
Sbjct: 1 YAYQLRFILIGDSTVGKSSLLRQFSDGKFFDFCDPTVGVDFNAR 44
>gi|449273763|gb|EMC83172.1| Ras-related protein Rab-39B, partial [Columba livia]
Length = 60
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+IGDSTVGKS L++ FT+G+FA+ISDPTVGVDFF+RLV + G
Sbjct: 1 VIGDSTVGKSCLIRRFTEGRFAQISDPTVGVDFFSRLVEIEPG 43
>gi|296480352|tpg|DAA22467.1| TPA: rab-related GTP-binding protein-like [Bos taurus]
Length = 98
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKF----AEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|50759922|ref|XP_425771.1| PREDICTED: ras-related protein Rab-39B-like [Gallus gallus]
Length = 211
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 42/55 (76%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P + YQFR+I++GDSTVGKSSLL+ +T+G F + + TVGVDF+ + V + G
Sbjct: 1 MEPRWHYQFRVIMLGDSTVGKSSLLRRYTEGVFLDAVNQTVGVDFYVQFVELEPG 55
>gi|327287672|ref|XP_003228552.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39A-like
[Anolis carolinensis]
Length = 253
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKF--AEISDPTVGVDFFARLVTMRDG 57
++ +QFRLI++GDSTVGKS LL FT+G+F ++PTVGVDFF+RL+ + G
Sbjct: 42 IWSFQFRLIVLGDSTVGKSCLLHRFTEGRFPGPRHAEPTVGVDFFSRLLEIEPG 95
>gi|344258079|gb|EGW14183.1| Ras-related protein Rab-39A [Cricetulus griseus]
Length = 87
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKF----AEISDPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT G+F + DPTVGVDFF+RL+ + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPG 59
>gi|359319414|ref|XP_003639078.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39A
[Canis lupus familiaris]
Length = 374
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEIS----DPTVGVDFFARLVTMRDG 57
++ ++ YQFRLI+IGDSTVGKS LL FT +F + DPTVGVDFF+R V + G
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQSRFPGLRSPAWDPTVGVDFFSRXVEIERG 59
>gi|340375477|ref|XP_003386261.1| PREDICTED: hypothetical protein LOC100637165 [Amphimedon
queenslandica]
Length = 472
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
YQFRLI+IG+STVGKS LL+ FT G++ E +DPTVGVDF ++V + DG
Sbjct: 16 YQFRLIIIGESTVGKSCLLRRFTQGRWIEHNDPTVGVDFHTKMVQV-DG 63
>gi|449273182|gb|EMC82790.1| Ras-related protein Rab-39B [Columba livia]
Length = 216
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ YQFR+I++GDSTVGKSSLL+ +T+G F + + TVGVDF+ + V + G
Sbjct: 5 WQYQFRVIMLGDSTVGKSSLLRRYTEGIFLDAVNQTVGVDFYVQFVELEPG 55
>gi|321149941|gb|ADW66118.1| Rab-39 [Schmidtea mediterranea]
Length = 56
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 37/42 (88%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
LIGDS VGKSSL++ F++GKF+EI DPTVGVDFF+R++ + D
Sbjct: 1 LIGDSMVGKSSLVRCFSEGKFSEICDPTVGVDFFSRIIEIPD 42
>gi|348526153|ref|XP_003450585.1| PREDICTED: ras-related protein Rab-39A-like [Oreochromis
niloticus]
Length = 222
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
L+ YQFR+I++GDSTVGKSSLLK +T+ F E + TVGVDF+ + + G
Sbjct: 5 LWQYQFRIIMLGDSTVGKSSLLKRYTEDLFMESINETVGVDFYVHFLEVEPG 56
>gi|432910361|ref|XP_004078329.1| PREDICTED: ras-related protein Rab-39A-like [Oryzias latipes]
Length = 217
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
L+ YQFR+I++GDSTVGKSSLLK +T+ F E + TVGVDF+ + + G
Sbjct: 5 LWQYQFRIIMLGDSTVGKSSLLKRYTEDLFLESINQTVGVDFYVSFLEVEPG 56
>gi|348041248|ref|NP_001017683.2| ras-related protein Rab-3B-like [Danio rerio]
Length = 218
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
L+ YQFR+I++GDSTVGKSS+LK +T+ F E + TVGVDF+ + + G
Sbjct: 5 LWQYQFRIIMLGDSTVGKSSMLKRYTEDLFLECINQTVGVDFYVHFLEVEPG 56
>gi|326675088|ref|XP_003200275.1| PREDICTED: ras-related protein Rab-39B-like [Danio rerio]
Length = 218
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
L+ YQFR+I++GDSTVGKSS+LK +T+ F E + TVGVDF+ + + G
Sbjct: 5 LWQYQFRIIMLGDSTVGKSSMLKRYTEDLFLECINQTVGVDFYVHFLEVEPG 56
>gi|410926932|ref|XP_003976922.1| PREDICTED: ras-related protein Rab-39A-like [Takifugu rubripes]
Length = 231
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
L+ YQFR+I++GDSTVGKSSL+K + +G F + + TVGVDF+ + + G
Sbjct: 20 LWRYQFRIIMLGDSTVGKSSLVKRYAEGLFQDSINQTVGVDFYVHFLEVEQG 71
>gi|167527390|ref|XP_001748027.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773445|gb|EDQ87084.1| predicted protein [Monosiga brevicollis MX1]
Length = 200
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
M+ D +DY +L +GDS VGKSS+++ F +G F E PT+GVDFF R V M+
Sbjct: 1 MSFDNDYDYLVKLCAVGDSQVGKSSIIQRFANGIFPEFHGPTIGVDFFFRTVEMK 55
>gi|301610329|ref|XP_002934692.1| PREDICTED: ras-related protein Rab-39B-like [Xenopus (Silurana)
tropicalis]
Length = 206
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+D+QFR++L+GDS VGK+SLL +TDG+F + + TVGVDF R
Sbjct: 5 WDFQFRVLLLGDSGVGKTSLLHRYTDGQFTDTTTETVGVDFCCR 48
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M +D +DY F+++LIGDS VGKS+LL F G F S T+GV+F + V +R+G
Sbjct: 1 MALDQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNG 57
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DG 52
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|224102877|ref|XP_002312839.1| predicted protein [Populus trichocarpa]
gi|118481778|gb|ABK92828.1| unknown [Populus trichocarpa]
gi|222849247|gb|EEE86794.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|297798332|ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTV-DG 52
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b;
AltName: Full=Ras-related protein GB2; Short=AtGB2;
AltName: Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTV-DG 52
>gi|89258443|gb|ABD65445.1| Rab39 [Suberites domuncula]
Length = 232
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
YQFRLILIG+STVGKSSLL+ F +G++ TVGVDF A++V
Sbjct: 8 YQFRLILIGESTVGKSSLLRQFKEGEYFPDISLTVGVDFHAKIV 51
>gi|356570243|ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
Length = 211
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M D +DY F+++LIGDS VGKS+LL F G F S T+GV+F + VT+ +G
Sbjct: 1 MVADQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNG 57
>gi|147818090|emb|CAN73550.1| hypothetical protein VITISV_005966 [Vitis vinifera]
Length = 237
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DG 52
>gi|326427375|gb|EGD72945.1| GTP-binding protein yptV1 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 4 YSYLFKYIIIGDSAVGKSCLLLQFTDHRFQTVHDLTIGVEFGARMVTI-DG 53
>gi|294463840|gb|ADE77443.1| unknown [Picea sitchensis]
Length = 234
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+R+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIRN 52
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M ++ +DY F+++LIGDS VGKS+LL F G F S T+GV+F + VT+++G
Sbjct: 1 MALEHNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNG 57
>gi|357496971|ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatula]
gi|355493789|gb|AES74992.1| Small GTP-binding protein [Medicago truncatula]
Length = 211
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTI 50
>gi|443893884|dbj|GAC71340.1| GTPase Rab2 [Pseudozyma antarctica T-34]
Length = 1144
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY + ILIGDS+VGKSSLL TD +F DPT+GV+F + L+ + +G
Sbjct: 856 WDYILKFILIGDSSVGKSSLLVRLTDDRFLADPDPTIGVEFGSHLIRLDNG 906
>gi|71022257|ref|XP_761359.1| hypothetical protein UM05212.1 [Ustilago maydis 521]
gi|46097667|gb|EAK82900.1| hypothetical protein UM05212.1 [Ustilago maydis 521]
Length = 347
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY + ILIGDS+VGKSSLL TD +F DPT+GV+F + L+ + +G
Sbjct: 30 WDYILKFILIGDSSVGKSSLLVRLTDDRFLTDPDPTIGVEFGSHLIRLDNG 80
>gi|226503041|ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays]
gi|195625924|gb|ACG34792.1| ras-related protein Rab-18 [Zea mays]
gi|223972897|gb|ACN30636.1| unknown [Zea mays]
gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++VT+
Sbjct: 14 PEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLS-PTIGVDFKVKMVTI 62
>gi|343428867|emb|CBQ72412.1| related to YPT31-GTP-binding protein of the rab family
[Sporisorium reilianum SRZ2]
Length = 313
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY + ILIGDS+VGKSSLL TD +F DPT+GV+F + L+ + +G
Sbjct: 30 WDYILKFILIGDSSVGKSSLLVRLTDDRFLADPDPTIGVEFGSHLIRLDNG 80
>gi|363808076|ref|NP_001241959.1| uncharacterized protein LOC100797461 [Glycine max]
gi|255639407|gb|ACU19999.1| unknown [Glycine max]
Length = 211
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V++
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSI 50
>gi|8778652|gb|AAF79660.1|AC022314_1 F9C16.3 [Arabidopsis thaliana]
Length = 233
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+++LIGDS VGKSSLL FT F ++S PT+GVDF + +T+
Sbjct: 8 PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLS-PTIGVDFKVKYLTI 56
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
MT++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 56
>gi|6624302|dbj|BAA88497.1| small GTP-binding protein [Carica papaya]
Length = 211
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAI-DG 52
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M D +DY F+++LIGDS VGKS+LL F G F S T+GV+F + VT+ +G
Sbjct: 1 MVADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNG 57
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M D +DY F+++LIGDS VGKS+LL F G F S T+GV+F + V +R+G
Sbjct: 1 MAADHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNG 57
>gi|78042536|ref|NP_001030212.1| ras-related protein Rab-19 [Bos taurus]
gi|109892951|sp|Q3ZC27.1|RAB19_BOVIN RecName: Full=Ras-related protein Rab-19
gi|73587379|gb|AAI02962.1| RAB19, member RAS oncogene family [Bos taurus]
gi|296488160|tpg|DAA30273.1| TPA: RAB19, member RAS oncogene family [Bos taurus]
Length = 217
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
TVD FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 9 TVDENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVR 57
>gi|223973143|gb|ACN30759.1| unknown [Zea mays]
gi|413920115|gb|AFW60047.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 173
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++VT+
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLS-PTIGVDFKVKMVTI 62
>gi|261335598|emb|CBH18592.1| ras-related protein rab-2a, putative [Trypanosoma brucei
gambiense DAL972]
Length = 212
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT+++
Sbjct: 6 YVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKE 53
>gi|38224671|gb|AAR14147.1| Rab2B [Trypanosoma brucei]
Length = 212
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT+++
Sbjct: 6 YVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKE 53
>gi|74026032|ref|XP_829582.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834968|gb|EAN80470.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 212
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT+++
Sbjct: 6 YVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKE 53
>gi|351725909|ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max]
gi|255626443|gb|ACU13566.1| unknown [Glycine max]
Length = 215
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKS+LL FT F ++S PT+GVDF + VTM
Sbjct: 10 TQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLS-PTIGVDFKVKYVTM 60
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F+D + E T+GVDF R V +DG
Sbjct: 55 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVE-QDG 109
>gi|193624758|ref|XP_001951908.1| PREDICTED: ras-related protein Rab-2A-like [Acyrthosiphon pisum]
Length = 211
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F ARLVT+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLVTI 50
>gi|328859801|gb|EGG08909.1| hypothetical protein MELLADRAFT_84389 [Melampsora larici-populina
98AG31]
Length = 220
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY + +++GDS GKSSLL TD +F SDPT+GV+F A L+++ +G
Sbjct: 4 WDYIMKFVVVGDSNTGKSSLLVQLTDKRFLTQSDPTIGVEFGASLISLPNG 54
>gi|388856714|emb|CCF49674.1| related to YPT31-GTP-binding protein of the rab family [Ustilago
hordei]
Length = 330
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY + IL+GDS VGKSSLL TD +F DPT+GV+F + L+++ G
Sbjct: 32 WDYILKFILVGDSCVGKSSLLVRLTDDRFLTNPDPTIGVEFGSHLISLPSG 82
>gi|168022844|ref|XP_001763949.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162684954|gb|EDQ71353.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIEN 52
>gi|219123942|ref|XP_002182274.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406235|gb|EEC46175.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 210
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++++ D
Sbjct: 3 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISVAD 52
>gi|242077810|ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
gi|241940024|gb|EES13169.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
Length = 215
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++V++
Sbjct: 14 PEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLS-PTIGVDFKVKMVSI 62
>gi|308080183|ref|NP_001183851.1| uncharacterized protein LOC100502444 [Zea mays]
gi|238015024|gb|ACR38547.1| unknown [Zea mays]
gi|413920114|gb|AFW60046.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 100
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++VT+
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLS-PTIGVDFKVKMVTI 62
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
M++ +DY F+L+LIG+S+VGKSSLL F+D F E PT+GVDF R ++ A
Sbjct: 1 MSLQQDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKA 58
>gi|255071631|ref|XP_002499490.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
gi|226514752|gb|ACO60748.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
Length = 220
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F +R+V++ D
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRMVSIND 52
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis]
gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis]
Length = 571
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF + VT+
Sbjct: 8 PEFDYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLS-PTIGVDFKVKHVTI 56
>gi|268560844|ref|XP_002646304.1| C. briggsae CBR-UNC-108 protein [Caenorhabditis briggsae]
Length = 214
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DG 52
>gi|399163139|gb|AFP33145.1| rab-2, partial [Caenorhabditis elegans]
Length = 213
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 2 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DG 51
>gi|17507539|ref|NP_491233.1| Protein UNC-108 [Caenorhabditis elegans]
gi|308485248|ref|XP_003104823.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|308257521|gb|EFP01474.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|341876619|gb|EGT32554.1| CBN-UNC-108 protein [Caenorhabditis brenneri]
gi|341895318|gb|EGT51253.1| hypothetical protein CAEBREN_21630 [Caenorhabditis brenneri]
gi|373219190|emb|CCD66422.1| Protein UNC-108 [Caenorhabditis elegans]
Length = 214
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DG 52
>gi|449491237|ref|XP_004158837.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ +
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIEN 52
>gi|449434064|ref|XP_004134816.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ +
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIEN 52
>gi|290970854|ref|XP_002668282.1| rab family small GTPase [Naegleria gruberi]
gi|284081592|gb|EFC35538.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FD+ F+L+L+GDS GKSS++ FT+ +F E PT+GVDF + + +
Sbjct: 6 FDHNFKLVLVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNV 53
>gi|431911652|gb|ELK13800.1| Ras-related protein Rab-19 [Pteropus alecto]
Length = 217
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G +AE T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYAETQQNTIGVDFTVR 57
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
T D +DY F+L+LIGDS VGKS+LL FT +F S T+GV+F R V + D
Sbjct: 3 TSDEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHD 57
>gi|168049241|ref|XP_001777072.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671515|gb|EDQ58065.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|168061692|ref|XP_001782821.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665723|gb|EDQ52398.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|407411083|gb|EKF33291.1| hypothetical protein MOQ_002844 [Trypanosoma cruzi marinkellei]
Length = 207
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT++
Sbjct: 6 YVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQ 52
>gi|407850451|gb|EKG04844.1| hypothetical protein TCSYLVIO_004099 [Trypanosoma cruzi]
Length = 207
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT++
Sbjct: 6 YVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQ 52
>gi|71415329|ref|XP_809735.1| ras-related protein rab-2a [Trypanosoma cruzi strain CL Brener]
gi|70874162|gb|EAN87884.1| ras-related protein rab-2a, putative [Trypanosoma cruzi]
Length = 207
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT++
Sbjct: 6 YVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQ 52
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|219363283|ref|NP_001136891.1| uncharacterized protein LOC100217047 [Zea mays]
gi|194697490|gb|ACF82829.1| unknown [Zea mays]
gi|413937511|gb|AFW72062.1| hypothetical protein ZEAMMB73_237423 [Zea mays]
Length = 210
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEN 52
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
VD +DY F+L+LIGDS VGKS+LL FT +F S T+GV+F R V + D
Sbjct: 4 VDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILD 57
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+V+P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|401427135|ref|XP_003878051.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494298|emb|CBZ29597.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F ARL++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQ 52
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+V+P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|157874060|ref|XP_001685525.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
gi|68128597|emb|CAJ08729.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
Length = 211
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F ARL++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQ 52
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+V+P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|320165325|gb|EFW42224.1| RAB2A [Capsaspora owczarzaki ATCC 30864]
Length = 219
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 51
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M D +DY F+++LIGDS VGKS+LL F G F S T+GV+F + V + +G
Sbjct: 1 MVADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNG 57
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 57
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 57
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
M++ +DY F+L+LIG+S+VGKSSLL F+D F E PT+GVDF R ++ A
Sbjct: 1 MSLQQDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKA 58
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKSSLL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|387202244|gb|AFJ68941.1| gtp-binding protein gb2, partial [Nannochloropsis gaditana
CCMP526]
Length = 206
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
+ Y F+ I+IGDS VGKS LL FTD +F ++ D T+GV+F ARLV
Sbjct: 3 YAYLFKSIVIGDSGVGKSCLLLQFTDRRFVQVHDLTIGVEFGARLV 48
>gi|256074809|ref|XP_002573715.1| rab-2414 [Schistosoma mansoni]
gi|360043854|emb|CCD81400.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 216
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + D
Sbjct: 3 YAYLFKYIIIGDTAVGKSCLLLQFTDQRFQPVYDLTIGVEFGARMVNIGD 52
>gi|452820726|gb|EME27765.1| Rab family, other [Galdieria sulphuraria]
Length = 208
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGDS VGKS LL FTD +F I D T+GV+F A++V M DG
Sbjct: 3 YAYLFKFIIIGDSGVGKSCLLLQFTDKRFQPIHDLTIGVEFGAKIVQM-DG 52
>gi|308080195|ref|NP_001183679.1| putative NAC domain transcription factor superfamily protein [Zea
mays]
gi|238013812|gb|ACR37941.1| unknown [Zea mays]
gi|414586248|tpg|DAA36819.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 215
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++V++
Sbjct: 12 PEFDYLFKLLLIGDSGVGKSSLLLRFTADSFDDLS-PTIGVDFKVKMVSI 60
>gi|149212752|gb|ABR22619.1| GTP-binding protein [Lolium temulentum]
Length = 210
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|302142732|emb|CBI19935.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKS+LL FT F ++S PT+GVDF + V +
Sbjct: 106 PEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLS-PTIGVDFKVKHVNI 154
>gi|441640492|ref|XP_003270858.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-19
[Nomascus leucogenys]
Length = 268
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLF 61
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R + + DG +F
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDI-DGKKMF 67
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|427787333|gb|JAA59118.1| Putative rab2a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|54696256|gb|AAV38500.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368765|gb|AAX43233.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|550062|gb|AAA60241.1| GTP-binding protein [Homo sapiens]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|147900614|ref|NP_001090137.1| RAB2A, member RAS oncogene family [Xenopus laevis]
gi|83318436|gb|AAI08552.1| MGC131016 protein [Xenopus laevis]
Length = 228
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|41393075|ref|NP_958862.1| ras-related protein Rab-2A [Danio rerio]
gi|27881912|gb|AAH44459.1| RAB2A, member RAS oncogene family [Danio rerio]
gi|182891762|gb|AAI65141.1| Rab2a protein [Danio rerio]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|4506365|ref|NP_002856.1| ras-related protein Rab-2A isoform a [Homo sapiens]
gi|50979323|ref|NP_001003318.1| ras-related protein Rab-2A [Canis lupus familiaris]
gi|197098732|ref|NP_001126581.1| ras-related protein Rab-2A [Pongo abelii]
gi|302564413|ref|NP_001180789.1| ras-related protein Rab-2A [Macaca mulatta]
gi|350535689|ref|NP_001233386.1| ras-related protein Rab-2A [Pan troglodytes]
gi|296226560|ref|XP_002758983.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Callithrix
jacchus]
gi|301759885|ref|XP_002915755.1| PREDICTED: ras-related protein Rab-2A-like [Ailuropoda
melanoleuca]
gi|332213898|ref|XP_003256067.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Nomascus
leucogenys]
gi|390475645|ref|XP_003734991.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Callithrix
jacchus]
gi|402878329|ref|XP_003902845.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Papio anubis]
gi|403288788|ref|XP_003935569.1| PREDICTED: ras-related protein Rab-2A [Saimiri boliviensis
boliviensis]
gi|46577636|sp|P61019.1|RAB2A_HUMAN RecName: Full=Ras-related protein Rab-2A
gi|46577642|sp|P61105.1|RAB2A_CANFA RecName: Full=Ras-related protein Rab-2A
gi|75070519|sp|Q5R6B6.1|RAB2A_PONAB RecName: Full=Ras-related protein Rab-2A
gi|75075847|sp|Q4R4X6.1|RAB2A_MACFA RecName: Full=Ras-related protein Rab-2A
gi|20379036|gb|AAM21078.1|AF498930_1 small GTP binding protein RAB2A [Homo sapiens]
gi|35837|emb|CAA31411.1| unnamed protein product [Homo sapiens]
gi|164054|gb|AAA30888.1| GTP-binding protein (rab2) [Canis lupus familiaris]
gi|14286264|gb|AAH08929.1| RAB2A, member RAS oncogene family [Homo sapiens]
gi|54696258|gb|AAV38501.1| RAB2, member RAS oncogene family [Homo sapiens]
gi|55731983|emb|CAH92700.1| hypothetical protein [Pongo abelii]
gi|61358667|gb|AAX41604.1| RAB2 member RAS oncogene family [synthetic construct]
gi|67970120|dbj|BAE01404.1| unnamed protein product [Macaca fascicularis]
gi|67971014|dbj|BAE01849.1| unnamed protein product [Macaca fascicularis]
gi|119607233|gb|EAW86827.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607234|gb|EAW86828.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|189065426|dbj|BAG35265.1| unnamed protein product [Homo sapiens]
gi|261860492|dbj|BAI46768.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|312151824|gb|ADQ32424.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|335773365|gb|AEH58368.1| Ras-related protein Rab-2A-like protein [Equus caballus]
gi|343960663|dbj|BAK61921.1| ras-related protein Rab-2A [Pan troglodytes]
gi|380783321|gb|AFE63536.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|383408523|gb|AFH27475.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|384948552|gb|AFI37881.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|410218884|gb|JAA06661.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410260538|gb|JAA18235.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410305644|gb|JAA31422.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410355261|gb|JAA44234.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|417397207|gb|JAA45637.1| Putative rab subfamily protein of small gtpase [Desmodus
rotundus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|464526|sp|Q05975.1|RAB2_LYMST RecName: Full=Ras-related protein Rab-2
gi|288938|emb|CAA51234.1| RAB2 [Lymnaea stagnalis]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|156119376|ref|NP_001095172.1| ras-related protein Rab-2A [Oryctolagus cuniculus]
gi|266878|sp|Q01971.1|RAB2A_RABIT RecName: Full=Ras-related protein Rab-2A
gi|1696|emb|CAA48208.1| tubulovesicle-membrane-associated GTP-binding protein
[Oryctolagus cuniculus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus
rotundus]
Length = 267
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|392876326|gb|AFM86995.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|387914838|gb|AFK11028.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|357613677|gb|EHJ68649.1| ras-related protein Rab-2A [Danaus plexippus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis
niloticus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|325303716|tpg|DAA34556.1| TPA_exp: RAS oncogene family member RAB2 [Amblyomma variegatum]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|311253799|ref|XP_001926739.2| PREDICTED: ras-related protein Rab-2A [Sus scrofa]
gi|385281364|gb|AFI57834.1| ras-related protein Rab-2A [Capra hircus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|301613321|ref|XP_002936157.1| PREDICTED: ras-related protein Rab-2A [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|291399649|ref|XP_002716214.1| PREDICTED: RAB2A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|242010199|ref|XP_002425860.1| RAB-2,4,14, putative [Pediculus humanus corporis]
gi|212509812|gb|EEB13122.1| RAB-2,4,14, putative [Pediculus humanus corporis]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|213513554|ref|NP_001133505.1| ras-related protein Rab-2A [Salmo salar]
gi|197632081|gb|ACH70764.1| RAB2A, member RAS oncogene family [Salmo salar]
gi|209154270|gb|ACI33367.1| Ras-related protein Rab-2A [Salmo salar]
gi|223647330|gb|ACN10423.1| Ras-related protein Rab-2A [Salmo salar]
gi|223649324|gb|ACN11420.1| Ras-related protein Rab-2A [Salmo salar]
gi|223673215|gb|ACN12789.1| Ras-related protein Rab-2A [Salmo salar]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|195120996|ref|XP_002005007.1| GI19298 [Drosophila mojavensis]
gi|193910075|gb|EDW08942.1| GI19298 [Drosophila mojavensis]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|156555012|ref|XP_001603108.1| PREDICTED: ras-related protein Rab-2-like [Nasonia vitripennis]
Length = 214
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|156371397|ref|XP_001628750.1| predicted protein [Nematostella vectensis]
gi|156215735|gb|EDO36687.1| predicted protein [Nematostella vectensis]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|91087587|ref|XP_971919.1| PREDICTED: similar to Rab-protein 2 CG3269-PA [Tribolium
castaneum]
gi|270010699|gb|EFA07147.1| hypothetical protein TcasGA2_TC010138 [Tribolium castaneum]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|34849826|gb|AAH58382.1| RAB2A, member RAS oncogene family [Mus musculus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|45382561|ref|NP_990559.1| ras-related protein Rab-2A [Gallus gallus]
gi|224046295|ref|XP_002198446.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Taeniopygia
guttata]
gi|82245348|sp|Q90965.1|RAB2A_CHICK RecName: Full=Ras-related protein Rab-2A
gi|664925|emb|CAA59004.1| GTP-binding protein [Gallus gallus]
gi|387017962|gb|AFJ51099.1| RAB2, member RAS oncogene family [Crotalus adamanteus]
Length = 212
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|6517192|dbj|BAA87878.1| Drab2 [Drosophila melanogaster]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|17137088|ref|NP_477090.1| Rab2, isoform A [Drosophila melanogaster]
gi|442622498|ref|NP_001260732.1| Rab2, isoform B [Drosophila melanogaster]
gi|194758098|ref|XP_001961299.1| GF11067 [Drosophila ananassae]
gi|194864038|ref|XP_001970739.1| GG23219 [Drosophila erecta]
gi|195474169|ref|XP_002089364.1| GE19072 [Drosophila yakuba]
gi|195580994|ref|XP_002080319.1| GD10420 [Drosophila simulans]
gi|2313035|dbj|BAA21706.1| rab2 [Drosophila melanogaster]
gi|21645117|gb|AAM70817.1| Rab2, isoform A [Drosophila melanogaster]
gi|27820101|gb|AAO25075.1| GH01619p [Drosophila melanogaster]
gi|190622597|gb|EDV38121.1| GF11067 [Drosophila ananassae]
gi|190662606|gb|EDV59798.1| GG23219 [Drosophila erecta]
gi|194175465|gb|EDW89076.1| GE19072 [Drosophila yakuba]
gi|194192328|gb|EDX05904.1| GD10420 [Drosophila simulans]
gi|220944512|gb|ACL84799.1| Rab2-PA [synthetic construct]
gi|220954388|gb|ACL89737.1| Rab2-PA [synthetic construct]
gi|440214116|gb|AGB93265.1| Rab2, isoform B [Drosophila melanogaster]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|125806738|ref|XP_001360146.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|195149123|ref|XP_002015507.1| GL11116 [Drosophila persimilis]
gi|195455130|ref|XP_002074572.1| GK23088 [Drosophila willistoni]
gi|54635317|gb|EAL24720.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|194109354|gb|EDW31397.1| GL11116 [Drosophila persimilis]
gi|194170657|gb|EDW85558.1| GK23088 [Drosophila willistoni]
Length = 213
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|146096690|ref|XP_001467894.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|398020934|ref|XP_003863630.1| ras-related protein rab-2a, putative [Leishmania donovani]
gi|134072260|emb|CAM70965.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|322501863|emb|CBZ36946.1| ras-related protein rab-2a, putative [Leishmania donovani]
Length = 211
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F ARL++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQ 52
>gi|395546064|ref|XP_003774914.1| PREDICTED: ras-related protein Rab-2A-like [Sarcophilus harrisii]
Length = 212
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F ARLV++ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLVSI-DG 52
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 57
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 55
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|38524287|emb|CAD57744.1| RAB-like small G-protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1
[Strongylocentrotus purpuratus]
Length = 206
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|357166898|ref|XP_003580906.1| PREDICTED: ras-related protein RABC1-like [Brachypodium
distachyon]
Length = 215
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++V +
Sbjct: 14 PDFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLS-PTIGVDFKVKMVNI 62
>gi|242062134|ref|XP_002452356.1| hypothetical protein SORBIDRAFT_04g024320 [Sorghum bicolor]
gi|241932187|gb|EES05332.1| hypothetical protein SORBIDRAFT_04g024320 [Sorghum bicolor]
Length = 210
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|642121|gb|AAA61831.1| small GTP-binding protein [Oryza sativa Indica Group]
Length = 223
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|405950969|gb|EKC18921.1| Ras-related protein Rab-2 [Crassostrea gigas]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|402587368|gb|EJW81303.1| hypothetical protein WUBG_07788 [Wuchereria bancrofti]
Length = 212
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|332024209|gb|EGI64416.1| Ras-related protein Rab-2 [Acromyrmex echinatior]
Length = 194
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|195618502|gb|ACG31081.1| ras-related protein Rab-2-A [Zea mays]
Length = 210
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|193875868|gb|ACF24570.1| Ras-related small GTPase Rab2 [Gymnochlora stellata]
Length = 213
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|47028315|gb|AAT09090.1| RAB2 [Bigelowiella natans]
Length = 215
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 4 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 51
>gi|162461422|ref|NP_001105743.1| ras-like [Zea mays]
gi|2764802|emb|CAA54822.1| yptm3 [Zea mays]
gi|413922837|gb|AFW62769.1| ras protein Rab-2-A [Zea mays]
Length = 210
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|351726934|ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory protein [Glycine max]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 2 VSINPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL 55
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 57
>gi|190702475|gb|ACE75361.1| ras-related protein Rab-2 [Glyptapanteles indiensis]
Length = 214
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis
niloticus]
Length = 212
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + M DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDM-DG 54
>gi|410932295|ref|XP_003979529.1| PREDICTED: ras-related protein Rab-1B-like [Takifugu rubripes]
Length = 214
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + M DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDM-DG 54
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|112983258|ref|NP_001037612.1| GTP-binding protein RAB2 [Bombyx mori]
gi|99082890|gb|ABF66620.1| GTP-binding protein RAB2 [Bombyx mori]
Length = 214
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITI-DG 52
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 57
>gi|57547575|gb|AAW52512.1| small GTP-binding protein [Triticum aestivum]
Length = 210
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|15235981|ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName: Full=Ras-related protein RABB1c; Short=AtRABB1c;
AltName: Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis thaliana]
gi|5281023|emb|CAB45962.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis thaliana]
gi|297313917|gb|EFH44340.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|332658457|gb|AEE83857.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
Length = 211
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|357448155|ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago truncatula]
gi|355483401|gb|AES64604.1| Small GTP binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + M
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEM 52
>gi|326528385|dbj|BAJ93381.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + D
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDD 52
>gi|388493968|gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|218195901|gb|EEC78328.1| hypothetical protein OsI_18064 [Oryza sativa Indica Group]
Length = 213
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVT 53
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++V
Sbjct: 16 PDFDYLFKLLLIGDSGVGKSSLLLRFTSDAFEDLS-PTIGVDFKVKMVN 63
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V++
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSI 51
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
+ Y F+ I++GDS VGKS LL FTD +F D T+GV+F +R V + D A
Sbjct: 6 YSYVFKYIIVGDSAVGKSCLLLQFTDKRFKSTHDLTIGVEFGSRTVQINDKA 57
>gi|168046616|ref|XP_001775769.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162672921|gb|EDQ59452.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 212
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|4837727|gb|AAD30658.1|AF083256_1 small GTP binding protein Rab2 [Sporobolus stapfianus]
Length = 210
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|357164075|ref|XP_003579941.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 210
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|307207076|gb|EFN84885.1| Ras-related protein Rab-2A [Harpegnathos saltator]
Length = 214
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|343172006|gb|AEL98707.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + V M
Sbjct: 1 PEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLS-PTIGVDFKVKYVNM 49
>gi|195331895|ref|XP_002032634.1| GM20894 [Drosophila sechellia]
gi|194124604|gb|EDW46647.1| GM20894 [Drosophila sechellia]
Length = 200
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F DG + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|343172008|gb|AEL98708.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + V M
Sbjct: 1 PEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLS-PTIGVDFKVKYVNM 49
>gi|115446975|ref|NP_001047267.1| Os02g0586400 [Oryza sativa Japonica Group]
gi|46806275|dbj|BAD17483.1| putative GTP-binding protein yptm3 [Oryza sativa Japonica Group]
gi|113536798|dbj|BAF09181.1| Os02g0586400 [Oryza sativa Japonica Group]
gi|125540069|gb|EAY86464.1| hypothetical protein OsI_07846 [Oryza sativa Indica Group]
gi|125582673|gb|EAZ23604.1| hypothetical protein OsJ_07304 [Oryza sativa Japonica Group]
gi|215686464|dbj|BAG87725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712319|dbj|BAG94446.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|340059728|emb|CCC54123.1| putative ras-related protein rab-2a [Trypanosoma vivax Y486]
Length = 211
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
++Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+V + +
Sbjct: 4 YNYVFKYIIIGDSGVGKSCLLLQFTDRRFEPLHDLTIGVEFGARVVPIEN 53
>gi|255637328|gb|ACU18994.1| unknown [Glycine max]
Length = 211
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium
muris RN66]
Length = 203
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R +T+ +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLEN 54
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+DY F+++LIG+S VGKSSLL F+D F+E PT+GVDF R M+
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQ 55
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 55
>gi|440794437|gb|ELR15598.1| ras-related protein Rab-2A, putative [Acanthamoeba castellanii
str. Neff]
Length = 200
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I++GD+ VGKS LL FTD +F + D T+GV+F +R +T+ D
Sbjct: 19 YKYLFKYIIVGDTAVGKSCLLLQFTDKRFQPVHDLTIGVEFGSRTLTIED 68
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R +T+ D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDD 58
>gi|359806090|ref|NP_001241441.1| uncharacterized protein LOC100794330 [Glycine max]
gi|255645015|gb|ACU23007.1| unknown [Glycine max]
Length = 214
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKS+LL FT F ++S PT+GVDF + VT+
Sbjct: 11 PEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLS-PTIGVDFKVKYVTI 59
>gi|66501172|ref|XP_392651.2| PREDICTED: ras-related protein Rab-2-like [Apis mellifera]
gi|340709425|ref|XP_003393310.1| PREDICTED: ras-related protein Rab-2-like [Bombus terrestris]
gi|350407122|ref|XP_003487992.1| PREDICTED: ras-related protein Rab-2-like [Bombus impatiens]
gi|380017536|ref|XP_003692709.1| PREDICTED: ras-related protein Rab-2-like isoform 1 [Apis florea]
Length = 214
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|388501410|gb|AFK38771.1| unknown [Medicago truncatula]
Length = 211
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|357149828|ref|XP_003575246.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 210
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|163838698|ref|NP_001106234.1| ras-related protein Rab-2-B [Zea mays]
gi|1346957|sp|P49104.1|RAB2B_MAIZE RecName: Full=Ras-related protein Rab-2-B
gi|722328|gb|AAA63902.1| GTP binding protein [Zea mays]
gi|195647894|gb|ACG43415.1| ras-related protein Rab-2-A [Zea mays]
gi|224031795|gb|ACN34973.1| unknown [Zea mays]
gi|413918614|gb|AFW58546.1| ras protein Rab-2-B [Zea mays]
Length = 210
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|388514081|gb|AFK45102.1| unknown [Lotus japonicus]
Length = 211
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|242073412|ref|XP_002446642.1| hypothetical protein SORBIDRAFT_06g019620 [Sorghum bicolor]
gi|241937825|gb|EES10970.1| hypothetical protein SORBIDRAFT_06g019620 [Sorghum bicolor]
Length = 210
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|195605404|gb|ACG24532.1| ras-related protein Rab-2-A [Zea mays]
gi|223973609|gb|ACN30992.1| unknown [Zea mays]
Length = 209
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|89027976|gb|ABD59354.1| small GTP binding protein Rab2A [Saccharum officinarum]
gi|89027978|gb|ABD59355.1| small GTP binding protein Rab2A [Saccharum officinarum]
Length = 210
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+DY F+++LIG+S VGKSSLL F+D F+E PT+GVDF R M+
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQ 55
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 57
>gi|414586249|tpg|DAA36820.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 78
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L+LIGDS VGKSSLL FT F ++S PT+GVDF ++V++
Sbjct: 12 PEFDYLFKLLLIGDSGVGKSSLLLRFTADSFDDLS-PTIGVDFKVKMVSI 60
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus
anophagefferens]
Length = 208
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F I + T+GV+F ARLV + D
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDD 52
>gi|363808158|ref|NP_001242481.1| uncharacterized protein LOC100787603 [Glycine max]
gi|255639535|gb|ACU20062.1| unknown [Glycine max]
gi|255639578|gb|ACU20083.1| unknown [Glycine max]
Length = 209
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + VTM
Sbjct: 10 FDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLS-PTIGVDFKVKYVTM 56
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a;
AltName: Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F+D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVE-QDG 54
>gi|13929006|ref|NP_113906.1| ras-related protein Rab-2A [Rattus norvegicus]
gi|131789|sp|P05712.1|RAB2A_RAT RecName: Full=Ras-related protein Rab-2A
gi|206555|gb|AAA42007.1| ras protein [Rattus norvegicus]
Length = 212
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITI-DG 52
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune
H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune
H4-8]
Length = 212
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+++LIGDS VGKS+LL FT +F++ + T+GV+F R +T+
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITV 54
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+++LIGDS VGKS+LL F G F S T+GV+F + V +++G
Sbjct: 6 YDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNG 56
>gi|356514705|ref|XP_003526044.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC1-like
[Glycine max]
Length = 137
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + VTM
Sbjct: 10 FDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLS-PTIGVDFKVKYVTM 56
>gi|115458896|ref|NP_001053048.1| Os04g0470100 [Oryza sativa Japonica Group]
gi|38344743|emb|CAE03047.2| OSJNBa0089K21.1 [Oryza sativa Japonica Group]
gi|113564619|dbj|BAF14962.1| Os04g0470100 [Oryza sativa Japonica Group]
gi|116310017|emb|CAH67042.1| OSIGBa0124N08.4 [Oryza sativa Indica Group]
gi|125548663|gb|EAY94485.1| hypothetical protein OsI_16256 [Oryza sativa Indica Group]
gi|215765437|dbj|BAG87134.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629030|gb|EEE61162.1| hypothetical protein OsJ_15130 [Oryza sativa Japonica Group]
Length = 211
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITV 50
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F+D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVE-QDG 54
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D F+E T+GVDF R + + DG
Sbjct: 1 MNPDYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDL-DG 54
>gi|303272713|ref|XP_003055718.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463692|gb|EEH60970.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 219
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F +RLV +
Sbjct: 3 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRLVAI 50
>gi|392878122|gb|AFM87893.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV F AR++T+ DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVKFGARMITI-DG 52
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 4 INPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 55
>gi|326527045|dbj|BAK04464.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITV 50
>gi|413922836|gb|AFW62768.1| hypothetical protein ZEAMMB73_212646, partial [Zea mays]
Length = 194
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|328868471|gb|EGG16849.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 207
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINL-DGKII 57
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 51 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 105
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|66801519|ref|XP_629685.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208507|sp|P36409.2|RAB2A_DICDI RecName: Full=Ras-related protein Rab-2A
gi|60463063|gb|EAL61258.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 207
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
++ + F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ + A
Sbjct: 1 MYSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKA 53
>gi|217075558|gb|ACJ86139.1| unknown [Medicago truncatula]
gi|388494336|gb|AFK35234.1| unknown [Medicago truncatula]
Length = 175
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTI 50
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D F+E T+GVDF R + + DG
Sbjct: 1 MNPDYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDL-DG 54
>gi|224062966|ref|XP_002300952.1| predicted protein [Populus trichocarpa]
gi|222842678|gb|EEE80225.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
F+Y F+L+LIGDS VGKS+LL FT F ++S PT+GVDF + VT+
Sbjct: 11 FEYLFKLLLIGDSGVGKSTLLLSFTSKNFEDLS-PTIGVDFKVKHVTI 57
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEL-DG 54
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEL-DG 54
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + D
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIAD 52
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D F+E T+GVDF R + + DG
Sbjct: 1 MNPDYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDL-DG 54
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
M++ +DY F+++LIG+S VGKSSLL F D F E PT+GVDF R
Sbjct: 1 MSLQQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIR 50
>gi|449458101|ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449458103|ref|XP_004146787.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
gi|449529576|ref|XP_004171774.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449529578|ref|XP_004171775.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
Length = 213
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ P FDY F+L+LIGDS VGKS+LL FT F ++S PT+GVDF + VT+
Sbjct: 7 SSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLS-PTIGVDFKIKHVTV 58
>gi|154343265|ref|XP_001567578.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064910|emb|CAM43019.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 212
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F ARL++++
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQ 52
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F+D ++E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIEL-DG 54
>gi|66730270|ref|NP_001019497.1| ras-related protein Rab-19 [Rattus norvegicus]
gi|81889125|sp|Q5M7U5.1|RAB19_RAT RecName: Full=Ras-related protein Rab-19
gi|56789734|gb|AAH88443.1| RAB19, member RAS oncogene family [Rattus norvegicus]
gi|149065308|gb|EDM15384.1| similar to RAB19, member RAS oncogene family [Rattus norvegicus]
Length = 217
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
TVD DY F++ILIGDS VGK+ ++++F G ++E T+GVDF R
Sbjct: 9 TVDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVR 57
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D ++E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDL-DG 54
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F ARL+ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINI-DG 52
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F ARL+ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINI-DG 52
>gi|328874448|gb|EGG22813.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 210
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++ + F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 1 MYSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 49
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEL 52
>gi|351726990|ref|NP_001238169.1| GTP binding protein [Glycine max]
gi|450635|gb|AAA50159.1| GTP binding protein [Glycine max]
Length = 218
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F+D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL 55
>gi|444728384|gb|ELW68842.1| Ras-related protein Rab-19 [Tupaia chinensis]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|57097619|ref|XP_539883.1| PREDICTED: ras-related protein Rab-19 [Canis lupus familiaris]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|410953063|ref|XP_003983195.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-19 [Felis
catus]
Length = 234
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|403276230|ref|XP_003929809.1| PREDICTED: ras-related protein Rab-19 [Saimiri boliviensis
boliviensis]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|395837388|ref|XP_003791617.1| PREDICTED: ras-related protein Rab-19 [Otolemur garnettii]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|355748056|gb|EHH52553.1| hypothetical protein EGM_13010 [Macaca fascicularis]
Length = 264
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|355561049|gb|EHH17735.1| hypothetical protein EGK_14197 [Macaca mulatta]
Length = 264
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|296210478|ref|XP_002751979.1| PREDICTED: ras-related protein Rab-19 [Callithrix jacchus]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|119604354|gb|EAW83948.1| GTP-binding protein RAB19B [Homo sapiens]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|239915976|ref|NP_001008749.2| ras-related protein Rab-19 [Homo sapiens]
gi|114616316|ref|XP_001153248.1| PREDICTED: ras-related protein Rab-19 isoform 1 [Pan troglodytes]
gi|397484561|ref|XP_003813442.1| PREDICTED: ras-related protein Rab-19 [Pan paniscus]
gi|426358117|ref|XP_004046368.1| PREDICTED: ras-related protein Rab-19 [Gorilla gorilla gorilla]
gi|158513667|sp|A4D1S5.2|RAB19_HUMAN RecName: Full=Ras-related protein Rab-19
gi|187954847|gb|AAI40797.1| RAB19 protein [Homo sapiens]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|387849222|ref|NP_001248483.1| ras-related protein Rab-19 [Macaca mulatta]
gi|383418347|gb|AFH32387.1| ras-related protein Rab-19 [Macaca mulatta]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|51094782|gb|EAL24028.1| GTP-binding protein RAB19B [Homo sapiens]
Length = 264
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+L+LIGDS VGKS+LL FT +F S T+GV+F R V + D
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILD 57
>gi|225457841|ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related protein RABC1 [Vitis vinifera]
Length = 211
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ P FDY F+L+LIGDS VGKS+LL FT F ++S PT+GVDF + V +
Sbjct: 7 SSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLS-PTIGVDFKVKHVNI 58
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+++LIG+S VGKSSLL F D F + PT+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEV-DG 54
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDL 52
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
T+ P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R + +
Sbjct: 3 TISPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIEL 55
>gi|405120483|gb|AFR95254.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 232
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY + +LIGDS+VGKSSLL TD +F ++++PT+GV+F +R++T+
Sbjct: 6 WDYILKYVLIGDSSVGKSSLLVRLTDDRF-DLTEPTLGVEFGSRILTV 52
>gi|321263534|ref|XP_003196485.1| GTPase [Cryptococcus gattii WM276]
gi|317462961|gb|ADV24698.1| GTPase, putative [Cryptococcus gattii WM276]
Length = 233
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY + +LIGDS+VGKSSLL TD +F ++++PT+GV+F +R++T+
Sbjct: 6 WDYILKYVLIGDSSVGKSSLLVRLTDDRF-DLTEPTLGVEFGSRILTV 52
>gi|290980783|ref|XP_002673111.1| rab family small GTPase [Naegleria gruberi]
gi|284086692|gb|EFC40367.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|58266414|ref|XP_570363.1| GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134111474|ref|XP_775653.1| hypothetical protein CNBD6070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258315|gb|EAL21006.1| hypothetical protein CNBD6070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226596|gb|AAW43056.1| GTPase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 233
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY + +LIGDS+VGKSSLL TD +F ++++PT+GV+F +R++T+
Sbjct: 6 WDYILKYVLIGDSSVGKSSLLVRLTDDRF-DLTEPTLGVEFGSRILTV 52
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 38/50 (76%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DYQ+++++IGDS VGK++++ FT G+F+E + TVGV+F + + + D
Sbjct: 7 YDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDD 56
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 38/50 (76%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DYQ+++++IGDS VGK++++ FT G+F+E + TVGV+F + + + D
Sbjct: 7 YDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDD 56
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
M++ +DY F+++LIG+S VGKSSLL F D F E PT+GVDF R
Sbjct: 1 MSMQQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIR 50
>gi|224093425|ref|XP_002309918.1| predicted protein [Populus trichocarpa]
gi|222852821|gb|EEE90368.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + V +
Sbjct: 8 PEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLS-PTIGVDFKVKFVNI 56
>gi|126340875|ref|XP_001375267.1| PREDICTED: ras-related protein Rab-19-like [Monodelphis
domestica]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + + T+GVDF R
Sbjct: 11 DETFDYLFKIILIGDSNVGKTCVVQHFKSGIYTDTQQNTIGVDFMVR 57
>gi|410918967|ref|XP_003972956.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 224
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D FD+ F++ILIGDS VGK+ +++ F G F+E T+GVDF R V +
Sbjct: 9 DDSFDFLFKIILIGDSNVGKTCVVQNFKSGTFSEKQQNTIGVDFSVRTVEI 59
>gi|326912237|ref|XP_003202460.1| PREDICTED: ras-related protein Rab-19-like [Meleagris gallopavo]
Length = 214
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+ D FDY F++ILIGDS VGK+ ++ F G+F E T+GVDF R
Sbjct: 7 STDDAFDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVR 55
>gi|224080973|ref|XP_002306250.1| predicted protein [Populus trichocarpa]
gi|222855699|gb|EEE93246.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + V +
Sbjct: 8 PEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLS-PTIGVDFKVKFVNI 56
>gi|431898744|gb|ELK07121.1| Ras-related protein Rab-2B [Pteropus alecto]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|26892279|gb|AAN86142.1|AF468652_1 RAB2B [Homo sapiens]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|300798691|ref|NP_001179594.1| ras-related protein Rab-2B [Bos taurus]
gi|426232812|ref|XP_004010414.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Ovis aries]
gi|296483460|tpg|DAA25575.1| TPA: RAB2B protein-like [Bos taurus]
gi|440902097|gb|ELR52940.1| Ras-related protein Rab-2B [Bos grunniens mutus]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|73977362|ref|XP_532625.2| PREDICTED: ras-related protein Rab-2B isoform 1 [Canis lupus
familiaris]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|83415090|ref|NP_001032734.1| ras-related protein Rab-2B [Rattus norvegicus]
gi|77567746|gb|AAI07444.1| RAB2B, member RAS oncogene family [Rattus norvegicus]
gi|149033676|gb|EDL88474.1| rCG61209, isoform CRA_a [Rattus norvegicus]
gi|149033677|gb|EDL88475.1| rCG61209, isoform CRA_a [Rattus norvegicus]
Length = 215
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|74143960|dbj|BAE41281.1| unnamed protein product [Mus musculus]
Length = 193
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|30525051|ref|NP_766189.1| ras-related protein Rab-2B [Mus musculus]
gi|28380119|sp|P59279.1|RAB2B_MOUSE RecName: Full=Ras-related protein Rab-2B
gi|26332531|dbj|BAC29983.1| unnamed protein product [Mus musculus]
gi|26336258|dbj|BAC31814.1| unnamed protein product [Mus musculus]
gi|28278529|gb|AAH46334.1| RAB2B, member RAS oncogene family [Mus musculus]
gi|74180601|dbj|BAE35753.1| unnamed protein product [Mus musculus]
gi|74227753|dbj|BAE35713.1| unnamed protein product [Mus musculus]
gi|112292941|dbj|BAF02848.1| Rab2B [Mus musculus]
gi|148710302|gb|EDL42248.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148710303|gb|EDL42249.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|395861634|ref|XP_003803086.1| PREDICTED: ras-related protein Rab-2B [Otolemur garnettii]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|395745671|ref|XP_003778310.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-2B [Pongo
abelii]
Length = 222
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|355714890|gb|AES05151.1| RAB2B, member RAS oncoprotein family [Mustela putorius furo]
Length = 220
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 8 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 57
>gi|402875596|ref|XP_003901586.1| PREDICTED: ras-related protein Rab-2B [Papio anubis]
gi|355693102|gb|EHH27705.1| hypothetical protein EGK_17973 [Macaca mulatta]
gi|355778380|gb|EHH63416.1| hypothetical protein EGM_16382 [Macaca fascicularis]
gi|380817346|gb|AFE80547.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|383422287|gb|AFH34357.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|384949918|gb|AFI38564.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|348577589|ref|XP_003474566.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Cavia
porcellus]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|354491201|ref|XP_003507744.1| PREDICTED: ras-related protein Rab-2B-like [Cricetulus griseus]
gi|344252330|gb|EGW08434.1| Ras-related protein Rab-2B [Cricetulus griseus]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis
domestica]
Length = 272
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|291403498|ref|XP_002718096.1| PREDICTED: RAB2B protein [Oryctolagus cuniculus]
Length = 215
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|301784893|ref|XP_002927861.1| PREDICTED: ras-related protein Rab-2B-like [Ailuropoda
melanoleuca]
gi|410961828|ref|XP_003987480.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Felis catus]
gi|281340558|gb|EFB16142.1| hypothetical protein PANDA_017701 [Ailuropoda melanoleuca]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|311261052|ref|XP_003128612.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Sus scrofa]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|149692180|ref|XP_001505211.1| PREDICTED: ras-related protein Rab-2B-like [Equus caballus]
gi|335775161|gb|AEH58479.1| Ras-related protein Rab-2B-like protein [Equus caballus]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|57997511|emb|CAI46103.1| hypothetical protein [Homo sapiens]
Length = 209
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|54311137|gb|AAH33312.1| RAB2B, member RAS oncogene family [Mus musculus]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|12837642|dbj|BAB23894.1| unnamed protein product [Mus musculus]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|21361884|ref|NP_116235.2| ras-related protein Rab-2B isoform 1 [Homo sapiens]
gi|296214433|ref|XP_002753820.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Callithrix
jacchus]
gi|332223471|ref|XP_003260896.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Nomascus
leucogenys]
gi|332841820|ref|XP_003314293.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Pan troglodytes]
gi|397466079|ref|XP_003804800.1| PREDICTED: ras-related protein Rab-2B [Pan paniscus]
gi|426376304|ref|XP_004054944.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Gorilla gorilla
gorilla]
gi|28436385|sp|Q8WUD1.1|RAB2B_HUMAN RecName: Full=Ras-related protein Rab-2B
gi|18088786|gb|AAH20839.1| RAB2B, member RAS oncogene family [Homo sapiens]
gi|119586786|gb|EAW66382.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119586787|gb|EAW66383.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123993135|gb|ABM84169.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|124000125|gb|ABM87571.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|189067491|dbj|BAG37750.1| unnamed protein product [Homo sapiens]
gi|410220922|gb|JAA07680.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220924|gb|JAA07681.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220926|gb|JAA07682.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220928|gb|JAA07683.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220930|gb|JAA07684.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410268158|gb|JAA22045.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410328337|gb|JAA33115.1| RAB2B, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI-DG 52
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D ++E T+GVDF R + +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIEL 52
>gi|338724303|ref|XP_001498622.3| PREDICTED: ras-related protein Rab-19-like [Equus caballus]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFRSGVYTETQQNTIGVDFTVR 57
>gi|300122550|emb|CBK23119.2| unnamed protein product [Blastocystis hominis]
Length = 211
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ +
Sbjct: 3 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI 50
>gi|298709147|emb|CBJ31092.1| Rab2A, RAB family GTPase [Ectocarpus siliculosus]
Length = 208
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++++
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISI 50
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 204
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEL-DG 54
>gi|225718734|gb|ACO15213.1| Ras-related protein Rab-2 [Caligus clemensi]
Length = 212
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++++
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISI 50
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEL-DG 54
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINL-DGKII 57
>gi|426228109|ref|XP_004008157.1| PREDICTED: ras-related protein Rab-19 [Ovis aries]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVR 57
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D DY F++++ GDS VGKS LL F +F S PT+GV+F R V M
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVM 59
>gi|301756779|ref|XP_002914238.1| PREDICTED: ras-related protein Rab-19-like [Ailuropoda
melanoleuca]
Length = 217
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVR 57
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINL-DGKII 57
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F+D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|342186535|emb|CCC96022.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 211
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+V ++
Sbjct: 6 YVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVPIK 52
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 45 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 98
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 69 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 122
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 64 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 117
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 6 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 59
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 56 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 109
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|395539510|ref|XP_003771711.1| PREDICTED: ras-related protein Rab-19 [Sarcophilus harrisii]
Length = 217
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
T D FDY F++ILIGDS VGK+ ++++F G + + T+GVDF R
Sbjct: 9 TPDETFDYLFKIILIGDSNVGKTCVVQHFKSGLYTDSQQNTIGVDFTVR 57
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F+D + E T+GVDF R V +DG
Sbjct: 1 MNPKYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVE-KDG 54
>gi|348684558|gb|EGZ24373.1| hypothetical protein PHYSODRAFT_483962 [Phytophthora sojae]
Length = 210
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEN 52
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEL 52
>gi|301105767|ref|XP_002901967.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099305|gb|EEY57357.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 210
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEN 52
>gi|440798712|gb|ELR19779.1| Rasrelated protein Rab-2B, putative [Acanthamoeba castellanii
str. Neff]
Length = 216
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD++VGKS +L FTD +F + D T+GV+F AR+V +
Sbjct: 3 YAYLFKYIIIGDTSVGKSCILLQFTDKRFQSVHDITIGVEFGARVVKI 50
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEL-DG 54
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEL-DG 54
>gi|15235980|ref|NP_193449.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
gi|75318151|sp|O23561.1|RAB1A_ARATH RecName: Full=Ras-related protein RABB1a; Short=AtRABB1a;
AltName: Full=Ras-related protein Rab2B; Short=AtRab2B
gi|2245075|emb|CAB10497.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268467|emb|CAB80987.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|67633750|gb|AAY78799.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332658456|gb|AEE83856.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
Length = 205
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y+F+ I+IGD+ VGKS LL FTD +F + D T+GV+F A+ +T+
Sbjct: 3 YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITI 50
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|145545608|ref|XP_001458488.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831441|emb|CAI39306.1| rab_A68 [Paramecium tetraurelia]
gi|124426308|emb|CAK91091.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
FDY R+IL+GD+ +GKSSLL +TD +F + PT+G+DF +++
Sbjct: 8 FDYLLRIILVGDTGIGKSSLLMRYTDQEFQQNLLPTIGIDFKTKII 53
>gi|50728924|ref|XP_416347.1| PREDICTED: ras-related protein Rab-19 [Gallus gallus]
Length = 214
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+ D FDY F++ILIGDS VGK+ ++ F G+F E T+GVDF R
Sbjct: 7 SADDAFDYLFKIILIGDSNVGKTCVVHRFKTGQFYEKQQNTIGVDFTVR 55
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
VD +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + DG +
Sbjct: 5 VDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV-DGKMI 61
>gi|330841005|ref|XP_003292496.1| Rab GTPase [Dictyostelium purpureum]
gi|325077244|gb|EGC30969.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++ + F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 1 MYAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 49
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDD 59
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium
parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R +++ +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLEN 54
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 56
>gi|440792164|gb|ELR13392.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 264
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL F D +++E T+GVDF R + + D
Sbjct: 3 YDYLFKILLIGDSGVGKSALLLRFADDEYSESYISTIGVDFKIRTINIDD 52
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINL-DGKII 57
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1
[Oryctolagus cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda
melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis
domestica]
Length = 201
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|344297148|ref|XP_003420261.1| PREDICTED: ras-related protein Rab-19-like [Loxodonta africana]
Length = 217
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 14 FDYLFKIILIGDSNVGKTCVVQHFMSGVYTETQQNTIGVDFTVR 57
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|15218575|ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|145324172|ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|186488925|ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|75097949|sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; Short=AtRABC1; AltName:
Full=Ras-related protein Rab18; Short=AtRab18
gi|7523663|gb|AAF63103.1|AC006423_4 AtRab18 [Arabidopsis thaliana]
gi|13878001|gb|AAK44078.1|AF370263_1 putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|2231312|gb|AAB61997.1| AtRab18 [Arabidopsis thaliana]
gi|17104731|gb|AAL34254.1| putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|21555736|gb|AAM63924.1| GTP-binding protein(RAB1Y), putative [Arabidopsis thaliana]
gi|110743628|dbj|BAE99651.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332193882|gb|AEE32003.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193883|gb|AEE32004.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193884|gb|AEE32005.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
Length = 212
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+++LIGDS VGKSSLL FT F ++S PT+GVDF + +T+
Sbjct: 8 PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLS-PTIGVDFKVKYLTI 56
>gi|384483936|gb|EIE76116.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 212
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 52
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|13397937|emb|CAC34627.1| putative Rab2 GTPase [Plasmodium falciparum 3D7]
Length = 213
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARLV +
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLVNL 51
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
FDY F+L+LIGDS VGKS LL F +G F++ T+GVDF + + DG
Sbjct: 6 FDYLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDG 56
>gi|340379533|ref|XP_003388281.1| PREDICTED: ras-related protein Rab-30-like [Amphimedon
queenslandica]
Length = 212
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
+D+ F+++LIGD+ VGK+S+++ +TDG F PT+GVDF + +++ A
Sbjct: 5 YDFLFKIVLIGDAGVGKTSIVRRYTDGVFTSAGIPTIGVDFCIKTLSVNGSA 56
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|440796433|gb|ELR17542.1| Ras family GTP-binding protein YPT1 [Acanthamoeba castellanii
str. Neff]
Length = 209
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+LILIGDS VGKS LL F D + + + T+GVDF R VT+ D
Sbjct: 8 YDYIFKLILIGDSGVGKSCLLTRFADETYHDATLSTIGVDFKFRNVTLAD 57
>gi|327285133|ref|XP_003227289.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 234
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGDS VGKS LL FTD +F + TVGV+F +R++T+ D
Sbjct: 3 YAYLFKYIVIGDSGVGKSCLLLQFTDKRFLSSHNLTVGVEFGSRMITIND 52
>gi|297852170|ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
gi|297339808|gb|EFH70225.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P FDY F+++LIGDS VGKSSLL FT F ++S PT+GVDF + +T+
Sbjct: 8 PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLS-PTIGVDFKVKYLTI 56
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEL-DG 54
>gi|440902734|gb|ELR53487.1| Ras-related protein Rab-19 [Bos grunniens mutus]
Length = 217
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVR 57
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium
distachyon]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 56 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 109
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 38 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 91
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVD-QDG 54
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + D
Sbjct: 11 YDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVED 60
>gi|384496239|gb|EIE86730.1| hypothetical protein RO3G_11441 [Rhizopus delemar RA 99-880]
Length = 204
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++Y + I++GDS VGKS LL FTD +F + T+GV+F +R +TM DG
Sbjct: 4 YNYIIKYIIVGDSGVGKSCLLLQFTDKRFYAGRELTIGVEFGSRFITMSDG 54
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
M D +DY F+L+LIGDS VGKS+LL FT +F+ + T+GV+F R V
Sbjct: 1 MGADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSV 52
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|72078956|ref|XP_782537.1| PREDICTED: ras-related protein Rab-2A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|54020781|ref|NP_001005636.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257826|gb|AAH74632.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269892|emb|CAJ83496.1| RAB2B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2
homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|384253262|gb|EIE26737.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|313228144|emb|CBY23294.1| unnamed protein product [Oikopleura dioica]
Length = 211
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|307110175|gb|EFN58411.1| GTP-binding protein YPTC4 [Chlorella variabilis]
Length = 217
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|145536742|ref|XP_001454093.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833739|emb|CAI39340.1| rab_B31 [Paramecium tetraurelia]
gi|124421837|emb|CAK86696.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAF 59
L+ Y F+ I++GD++VGKS LL +T+GKF E D T+GV+F ++ ++ F
Sbjct: 3 LYHYLFKFIIVGDTSVGKSCLLLKYTEGKFKEEHDATIGVEFGSQAFKYKNKQF 56
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 14 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 67
>gi|402865006|ref|XP_003896730.1| PREDICTED: ras-related protein Rab-19 [Papio anubis]
Length = 177
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 9 AADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVR 57
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 11 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 64
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|54696254|gb|AAV38499.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368760|gb|AAX43232.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ +IGD+ VGKS LL FTD +F + D T+GV+F AR++T+ DG
Sbjct: 3 YAYLFKYTIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DG 52
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis
thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis
thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDD 59
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEL-DG 54
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVEL 52
>gi|209881440|ref|XP_002142158.1| Rab2 GTPase protein [Cryptosporidium muris RN66]
gi|209557764|gb|EEA07809.1| Rab2 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 214
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+ I+IGD+ VGKS LL FTD +F D T+GV+F AR+V +
Sbjct: 5 YDYLFKYIIIGDTAVGKSCLLLQFTDHRFRIDHDLTIGVEFGARVVNI 52
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
M++ +DY F+L+LIG+S VGKSSLL F+D F + PT+GVDF R ++ A
Sbjct: 1 MSLQQDYDYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKA 58
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 36 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 89
>gi|225714638|gb|ACO13165.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
gi|290562553|gb|ADD38672.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI 50
>gi|225713134|gb|ACO12413.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI 50
>gi|225709940|gb|ACO10816.1| Ras-related protein Rab-2 [Caligus rogercresseyi]
Length = 212
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI 50
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI 50
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|256074811|ref|XP_002573716.1| rab-2414 [Schistosoma mansoni]
gi|360043855|emb|CCD81401.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 196
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + D
Sbjct: 3 YAYLFKYIIIGDTAVGKSCLLLQFTDQRFQPVYDLTIGVEFGARMVNIGD 52
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium
distachyon]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTV 50
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDL-DG 54
>gi|348526560|ref|XP_003450787.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis
niloticus]
Length = 224
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D FD+ F+L+LIGDS VGK+ +++ F G F+E T+GVDF R
Sbjct: 9 DDTFDFLFKLVLIGDSNVGKTCVIQNFKSGIFSEKQQNTIGVDFTVR 55
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium
distachyon]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|281205133|gb|EFA79326.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 253
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++ + F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++++
Sbjct: 1 MYAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISI 49
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIEL-DG 54
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|428186007|gb|EKX54858.1| hypothetical protein GUITHDRAFT_149882 [Guillardia theta
CCMP2712]
Length = 207
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR +T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARRITI 50
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + GA
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVSTGA 59
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ +LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 85 ELAFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV-DG 131
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDL 52
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|237830259|ref|XP_002364427.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962091|gb|EEA97286.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487500|gb|EEE25732.1| RAB-2,4,14, putative [Toxoplasma gondii GT1]
gi|221507298|gb|EEE32902.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii VEG]
Length = 214
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARLV++
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLTIGVEFGARLVSI 51
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|71653649|ref|XP_815459.1| ras-related protein rab-2a [Trypanosoma cruzi strain CL Brener]
gi|70880514|gb|EAN93608.1| ras-related protein rab-2a, putative [Trypanosoma cruzi]
Length = 92
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
Y F+ I+IGDS VGKS LL FTD +F + D T+GV+F AR+VT++
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQ 53
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTV 50
>gi|291413290|ref|XP_002722907.1| PREDICTED: RAB19, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 217
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
T + FDY F++ILIGDS VGK+ ++++F G + E T+GVDF R
Sbjct: 9 TAEEDFDYLFKIILIGDSNVGKTCVVQHFKSGVYTESRQNTIGVDFTVR 57
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEL 52
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 6 MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 59
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY FR++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|124806378|ref|XP_001350706.1| Rab2, GTPase [Plasmodium falciparum 3D7]
gi|23496833|gb|AAN36386.1| Rab2, GTPase [Plasmodium falciparum 3D7]
Length = 213
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARL+ +
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINL 51
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|340381310|ref|XP_003389164.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Amphimedon
queenslandica]
Length = 217
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ + DG
Sbjct: 3 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI-DG 52
>gi|297800396|ref|XP_002868082.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
gi|297313918|gb|EFH44341.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y+F+ ILIGD+ VGKS LL FTD +F + D T+GV+F ++ +T+
Sbjct: 3 YAYRFKYILIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGSKKITI 50
>gi|156103415|ref|XP_001617400.1| small GTPase Rab2 [Plasmodium vivax Sal-1]
gi|148806274|gb|EDL47673.1| small GTPase Rab2, putative [Plasmodium vivax]
Length = 213
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARL+ +
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINL 51
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|145510580|ref|XP_001441223.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408462|emb|CAK73826.1| unnamed protein product [Paramecium tetraurelia]
Length = 281
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ +LIGD+ VGKS L + GKF + DPT+G++F ++ + DG
Sbjct: 6 YQYLFKFVLIGDTGVGKSCFLSQYVKGKFIQEYDPTIGLEFESKSIEFNDG 56
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 8 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 62
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|162460944|ref|NP_001106078.1| ras-related protein Rab-2-A [Zea mays]
gi|1346956|sp|P49103.1|RAB2A_MAIZE RecName: Full=Ras-related protein Rab-2-A
gi|722326|gb|AAA63901.1| GTP binding protein [Zea mays]
gi|414586805|tpg|DAA37376.1| TPA: ras protein Rab-2-A [Zea mays]
Length = 209
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI 50
>gi|357519975|ref|XP_003630276.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|355524298|gb|AET04752.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|388503306|gb|AFK39719.1| unknown [Medicago truncatula]
Length = 208
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + VT+
Sbjct: 10 FDYMFKLLMIGDSGVGKSSLLLRFTSDDFDDLS-PTIGVDFKVKYVTIE 57
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 52
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI 50
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIEL-DG 54
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 54
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|449459232|ref|XP_004147350.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
gi|449513301|ref|XP_004164289.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
Length = 209
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVT 53
FDY F+L++IGDS VGKSSLL FT F ++S PT+GVDF + VT
Sbjct: 10 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLS-PTIGVDFKVKYVT 55
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVED 58
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|68068036|ref|XP_675931.1| Rab2 GTPase [Plasmodium berghei strain ANKA]
gi|70938894|ref|XP_740062.1| Rab2 GTPase [Plasmodium chabaudi chabaudi]
gi|56495388|emb|CAH95114.1| Rab2 GTPase, putative [Plasmodium berghei]
gi|56517511|emb|CAH84846.1| Rab2 GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 213
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARL+ +
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINL 51
>gi|221061627|ref|XP_002262383.1| rab2 gtpase [Plasmodium knowlesi strain H]
gi|193811533|emb|CAQ42261.1| rab2 gtpase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARL+ +
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINL 51
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+L+LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS
2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS
2517]
Length = 245
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + M
Sbjct: 10 YDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEM 57
>gi|350595168|ref|XP_003134657.2| PREDICTED: ras-related protein Rab-19-like [Sus scrofa]
Length = 154
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D FDY F++IL+GDS VGK+ ++++F G + E T+GVDF R + + DG
Sbjct: 11 DENFDYLFKVILVGDSNVGKTCVVQHFKSGVYTEAQQNTIGVDFTVRALEI-DG 63
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDG 54
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
M D +DY F+L+LIGDS VGKS+LL FT +F+ + T+GV+F R V
Sbjct: 1 MGADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSV 52
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVE-QDG 54
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|340373098|ref|XP_003385079.1| PREDICTED: ras-related protein Rab-13-like [Amphimedon
queenslandica]
Length = 219
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +D+ F+L+L GDS+VGK+ L+ F D +F T+G+DF +L T+RD
Sbjct: 6 DKKYDHLFQLLLCGDSSVGKTCLISRFADNEFRHTHINTIGIDFKLKLFTIRD 58
>gi|82595062|ref|XP_725689.1| Rab2 GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23480789|gb|EAA17254.1| putative Rab2 GTPase [Plasmodium yoelii yoelii]
Length = 213
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARL+ +
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINL 51
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|401411449|ref|XP_003885172.1| hypothetical protein NCLIV_055690 [Neospora caninum Liverpool]
gi|325119591|emb|CBZ55144.1| hypothetical protein NCLIV_055690 [Neospora caninum Liverpool]
Length = 214
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARL+++
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLTIGVEFGARLISI 51
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVE-QDG 54
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
DY F+ +LIGDS VGKS+LL F+ +F S PT+GVDF R V + D
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGD 59
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus
anophagefferens]
Length = 210
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F I + T+GV+F AR+V +
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAI 50
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
DY F+ +LIGDS VGKS+LL F+ +F S PT+GVDF R V + D
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGD 59
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
DY F+ +LIGDS VGKS+LL F+ +F S PT+GVDF R V + D
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGD 59
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
DY F+ +LIGDS VGKS+LL F+ +F S PT+GVDF R V + D
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGD 59
>gi|145487073|ref|XP_001429542.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia]
gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+++Y F+ I++GD+ VGKS LL FTD +F D T+GV+F +R + + D
Sbjct: 3 IYNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKIND 53
>gi|145504759|ref|XP_001438346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia]
gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+++Y F+ I++GD+ VGKS LL FTD +F D T+GV+F +R + + D
Sbjct: 3 IYNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKIND 53
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
T D +DY F+++LIGDS VGK+++LK F + +F S PT+GV+F
Sbjct: 4 TNDEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEF 49
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
M+ D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +
Sbjct: 1 MSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSI 52
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 52
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 54
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 116 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 165
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 82
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 54
>gi|38048055|gb|AAR09930.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 119
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+V+P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 55
>gi|340504779|gb|EGR31194.1| hypothetical protein IMG5_116200 [Ichthyophthirius multifiliis]
Length = 221
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
++Y F+ ILIG++ VGKS LL FT+G+F + D T+GV+F ++ + + D
Sbjct: 4 YNYLFKFILIGNTCVGKSCLLSQFTEGRFKKEHDATIGVEFGSKNILVND 53
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDG 54
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta
CCMP2712]
Length = 218
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M+ D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 1 MSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 56
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
T+ DY F++++IGDS VGK+ LL FT +F S T+GV+F R +T+R
Sbjct: 20 TMPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLR 73
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|145544282|ref|XP_001457826.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833814|emb|CAI39366.1| rab_A31 [Paramecium tetraurelia]
gi|124425644|emb|CAK90429.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
L+ Y F+ I++GD++VGKS LL +T+GKF E D T+GV+F
Sbjct: 3 LYHYLFKFIIVGDTSVGKSCLLLNYTEGKFKEEHDATIGVEF 44
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|102139998|gb|ABF70133.1| GTP-binding protein, putative [Musa balbisiana]
Length = 75
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
+DY F+L+LIGDS VGKS+LL FT +F S T+GV+F R +T+ DG L
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSITV-DGKIL 62
>gi|38048295|gb|AAR10050.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 123
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+V+P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 55
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 49 PRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 100
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+L+LIGDS VGKS+LL FT +F S T+GV+F R + + D
Sbjct: 7 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDD 59
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D DY F++++ GDS VGKS LL F +F S PT+G++F R V M
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVM 59
>gi|1619843|gb|AAB16967.1| rab2-like, partial [Caenorhabditis elegans]
Length = 66
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+VT+
Sbjct: 3 YAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI 50
>gi|403362162|gb|EJY80798.1| Rab GTPase 2d [Oxytricha trifallax]
Length = 230
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I++GDS+VGKS LL FTD +F D T+GV+F +R V + +
Sbjct: 7 YSYVFKFIVVGDSSVGKSCLLLQFTDKRFKATHDLTIGVEFGSRTVQVNN 56
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium
castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDL-DG 54
>gi|294866679|ref|XP_002764808.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
gi|239864555|gb|EEQ97525.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
Length = 212
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IGD+ VGKS LL FTD +F D T+GV+F ARLV + DG
Sbjct: 3 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFRPDHDLTIGVEFGARLVNV-DG 52
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
M ++P DY F+++LIGDS VGKS +L F +F+ S T+GV+F R V +
Sbjct: 1 MDMNPKIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVI 54
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|428179155|gb|EKX48027.1| hypothetical protein GUITHDRAFT_93719 [Guillardia theta CCMP2712]
Length = 214
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY +L+LIGDS VGKSSLL F+D F PT+G+DF R + + DG
Sbjct: 12 YDYLIKLMLIGDSGVGKSSLLLRFSDDSFDMNCTPTIGIDFKLRTIEL-DG 61
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R V
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTV 50
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum
CS3096]
Length = 202
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
F+L+LIGDS VGKSSLL +T+ F T+GVDF +LVT+ DG
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDG 58
>gi|83771518|dbj|BAE61650.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 16 MVSLPAYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 71
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 505 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 557
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ ++D+ F+++LIGDS VGKS L+ FT +F+ PT+GV+F + + + D
Sbjct: 7 EDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISD 59
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L++IGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|116734835|ref|NP_001068822.1| ras-related protein Rab-2A [Bos taurus]
gi|109939903|gb|AAI18272.1| RAB2A, member RAS oncogene family [Bos taurus]
gi|296480621|tpg|DAA22736.1| TPA: RAB2A, member RAS oncogene family [Bos taurus]
Length = 189
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++L+GDS VGKS+LL FT +F S T+GV+F R + +++
Sbjct: 6 DDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQN 58
>gi|66823707|ref|XP_645208.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122057917|sp|Q559X6.1|RAB2B_DICDI RecName: Full=Ras-related protein Rab-2B
gi|60473275|gb|EAL71221.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+++ F+ I++GDS VGKS+LL F D +FA SD T+GV+F +R + + D
Sbjct: 21 YEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININD 70
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 4 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 55
>gi|297835774|ref|XP_002885769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331609|gb|EFH62028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 212
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+ I+IGD+ VGK+ LL FTD +F + D T+G F R+VT+ DG
Sbjct: 3 YDYLFKYIIIGDTGVGKTCLLLQFTDKRFQPVHDLTIGAGFGDRMVTV-DG 52
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
DY F++++IGDS VGKS+LL FT +F E + T+GVDF + + + +
Sbjct: 8 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEN 56
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT FA S T+GV+F R + + +
Sbjct: 15 YDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVEN 64
>gi|356508969|ref|XP_003523225.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
F+Y F+L++IGDS VGKSSLL FT F ++S PT+GVDF + +TM
Sbjct: 9 FEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLS-PTIGVDFKVKYLTME 56
>gi|241998682|ref|XP_002433984.1| RAS-related protein, putative [Ixodes scapularis]
gi|215495743|gb|EEC05384.1| RAS-related protein, putative [Ixodes scapularis]
Length = 155
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELE 56
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis
UAMH 10762]
Length = 201
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|89257641|gb|ABD65128.1| GTP-binding protein RAB2A, putative [Brassica oleracea]
Length = 192
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|356516366|ref|XP_003526866.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
F+Y F+L++IGDS VGKSSLL FT F ++S PT+GVDF + +TM
Sbjct: 9 FEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLS-PTIGVDFKVKYLTME 56
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY FR++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R +
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTI 54
>gi|218194924|gb|EEC77351.1| hypothetical protein OsI_16033 [Oryza sativa Indica Group]
Length = 628
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
FDY F+L+LIGDS+VGKS L F D + + T+GVDF R + M DG
Sbjct: 360 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEM-DG 409
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F++ILIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|73536134|pdb|2A5J|A Chain A, Crystal Structure Of Human Rab2b
Length = 191
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V +
Sbjct: 16 PRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI 65
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine
max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine
max]
Length = 217
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDL-DG 54
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|13177615|gb|AAK14833.1| GTP-binding protein RAB19 [Mus musculus]
Length = 77
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
T D DY F++ILIGDS VGK+ ++++F G ++E T+GVDF R
Sbjct: 9 TSDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVR 57
>gi|50288533|ref|XP_446696.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526004|emb|CAG59623.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
QF+L+L+GDS+VGKSS++ F F E+ + T+G F ++ V ++DG
Sbjct: 3 QFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQTVKIKDG 50
>gi|393245703|gb|EJD53213.1| ras-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 229
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY + ++IGD+ VGKSS+L TD +F DPT+GV+F ++L+ + D
Sbjct: 6 WDYVLKFVIIGDAGVGKSSILVRLTDQRFLHSPDPTLGVEFGSKLIYVPD 55
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+++LIGDS VGKS+LL FT FA S T+GV+F R + +
Sbjct: 15 YDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQV 62
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|440804147|gb|ELR25025.1| Ras-related protein Rab-2-B [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D++F+ I++G S VGKSSLL FTD +F D T+GV+F AR V +
Sbjct: 8 YDHRFKYIVVGPSGVGKSSLLLQFTDKRFEPSHDMTIGVEFGARTVKL 55
>gi|118381174|ref|XP_001023748.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|5738170|gb|AAD50282.1|AF169952_1 putative intermediate compartment protein [Tetrahymena
thermophila]
gi|89305515|gb|EAS03503.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777888|dbj|BAJ21340.1| Rab-family small GTPase Rab2G [Tetrahymena thermophila]
Length = 207
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+ Y F+ I+IGDS+VGKS++L F +GKF D T+GV+F ++++ ++
Sbjct: 3 YSYLFKYIIIGDSSVGKSAILLQFMEGKFKAEHDTTIGVEFGSKIIQVK 51
>gi|357154071|ref|XP_003576660.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 209
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I++GD+ VGKS L+ FTD +F + D T+GV+F +R+VT+
Sbjct: 3 YAYLFKYIVVGDTGVGKSCLMLQFTDKRFQPVHDLTIGVEFGSRMVTI 50
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|8671779|gb|AAF78385.1|AC069551_18 T10O22.18 [Arabidopsis thaliana]
Length = 356
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
DY F+ +LIGDS VGKS+LL F+ +F S PT+GVDF R V + D
Sbjct: 11 DYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGD 59
>gi|355714860|gb|AES05141.1| RAB1A, member RAS oncoprotein family [Mustela putorius furo]
Length = 195
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 50 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 101
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
DY F++++IGDS VGKS+LL FT +F E + T+GVDF
Sbjct: 7 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDF 46
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|168006773|ref|XP_001756083.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692593|gb|EDQ78949.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
FD+ F+++L+G+S VGKSSLL FT KF ++S PT+GVDF ++V+++
Sbjct: 8 FDHLFKILLVGNSGVGKSSLLLRFTASKFDDLS-PTIGVDFKVKMVSLQ 55
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R V
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTV 54
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++P + Y F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 TMNPEYGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 57
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 32/50 (64%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
++P +DY F+L LIGDS VGKS LL F D + E T+GVDF R V
Sbjct: 1 MNPEYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTV 50
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCI 53
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
D +DY F+L+LIGDS VGKS+LL FT +F+ S T+GV+F R V
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSV 55
>gi|21464438|gb|AAM52022.1| RE66843p [Drosophila melanogaster]
Length = 101
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVT 53
+V+P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R +
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIN 54
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|312382073|gb|EFR27648.1| hypothetical protein AND_05520 [Anopheles darlingi]
Length = 182
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 52
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|154550427|gb|ABS83488.1| RAB1 [Haliotis cracherodii]
Length = 140
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
T++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 3 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 55
>gi|149061036|gb|EDM11646.1| RAB2, member RAS oncogene family [Rattus norvegicus]
Length = 162
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|359497365|ref|XP_002269525.2| PREDICTED: ras-related protein Rab-2-B-like, partial [Vitis
vinifera]
gi|296085758|emb|CBI29569.3| unnamed protein product [Vitis vinifera]
Length = 102
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARIITI 50
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L LIGDS VGKS LL F D + E T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVE-QDG 54
>gi|224113131|ref|XP_002316401.1| predicted protein [Populus trichocarpa]
gi|118482557|gb|ABK93199.1| unknown [Populus trichocarpa]
gi|222865441|gb|EEF02572.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+++LIGDS VGKSSLL F ++S PT+GVDF +++T+
Sbjct: 13 YDYSFKILLIGDSGVGKSSLLLSFISNSVRDLS-PTIGVDFKIKVLTL 59
>gi|74096301|ref|NP_001027632.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
gi|28556900|dbj|BAC57527.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
Length = 176
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c;
AltName: Full=Ras-related protein Rab11A;
Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|223946909|gb|ACN27538.1| unknown [Zea mays]
gi|413922838|gb|AFW62770.1| hypothetical protein ZEAMMB73_212646 [Zea mays]
Length = 111
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
M D +D+ F+++LIGDS VGKS+LL FT +F S T+GV+F R + + +
Sbjct: 1 MAADDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEN 56
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|26335369|dbj|BAC31385.1| unnamed protein product [Mus musculus]
Length = 168
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R +
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI 53
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + G
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGG 59
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGD+ VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|90075602|dbj|BAE87481.1| unnamed protein product [Macaca fascicularis]
Length = 161
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|330791931|ref|XP_003284044.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
gi|330827546|ref|XP_003291835.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325077958|gb|EGC31637.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325085973|gb|EGC39370.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
Length = 208
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
Y F+ +++GD++VGKS LL FTD +F S T+GVDF +R++ ++ A
Sbjct: 6 YLFKFLILGDASVGKSCLLHRFTDNRFKSQSSHTIGVDFASRIIDIQGRA 55
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FDY F+L+LIGDS+VGKS L F D + + T+GVDF R + M
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEM 52
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 9 PPYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 60
>gi|449532881|ref|XP_004173406.1| PREDICTED: ras-related protein Rab-2-B-like, partial [Cucumis
sativus]
Length = 89
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 50
>gi|326667495|ref|XP_003198609.1| PREDICTED: ras-related protein Rab-19-like [Danio rerio]
Length = 157
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D FD+ F++ILIGDS VGK+SL++ F+ G F++ T+GVDF R + +
Sbjct: 5 DDSFDFLFKIILIGDSNVGKTSLVQSFSTGLFSQRQHNTIGVDFTVRTLNL 55
>gi|33859608|ref|NP_035356.1| ras-related protein Rab-19 [Mus musculus]
gi|158518382|sp|P35294.3|RAB19_MOUSE RecName: Full=Ras-related protein Rab-19
gi|21411203|gb|AAH32936.1| RAB19, member RAS oncogene family [Mus musculus]
gi|112292995|dbj|BAF02875.1| Rab19 [Mus musculus]
gi|148681662|gb|EDL13609.1| RAB19, member RAS oncogene family [Mus musculus]
Length = 217
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
T D DY F++ILIGDS VGK+ ++++F G ++E T+GVDF R
Sbjct: 9 TSDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVR 57
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii
H99]
Length = 205
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 4 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 53
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + DG +
Sbjct: 6 DEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV-DGKLV 61
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG +
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKMI 60
>gi|73535753|pdb|1Z0A|A Chain A, Gdp-Bound Rab2a Gtpase
gi|73535754|pdb|1Z0A|B Chain B, Gdp-Bound Rab2a Gtpase
gi|73535755|pdb|1Z0A|C Chain C, Gdp-Bound Rab2a Gtpase
gi|73535756|pdb|1Z0A|D Chain D, Gdp-Bound Rab2a Gtpase
Length = 174
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++T+
Sbjct: 7 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI 54
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
DY F+ +LIGDS VGKS+LL F +F S PT+GV+F R + +RD
Sbjct: 13 DYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRD 61
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 4 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 53
>gi|403178116|ref|XP_003336562.2| hypothetical protein PGTG_17873 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173345|gb|EFP92143.2| hypothetical protein PGTG_17873 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 230
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
F +Q + GDS+ GKSSLL TD +F SDPT+GV+F A L+++ +G
Sbjct: 16 FPFQIGYEIFGDSSTGKSSLLVQLTDKRFLGQSDPTIGVEFGASLISLPNG 66
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|189236461|ref|XP_974013.2| PREDICTED: similar to RAB33B, member RAS oncogene family
[Tribolium castaneum]
Length = 215
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 2 TVDPLFDYQ--FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T++ +Y+ F++I+IGDS VGK+SL F +G F E S+ T+GVDF +R +T+ DG
Sbjct: 14 TINKTTNYKKIFKIIVIGDSNVGKTSLTYRFCEGAFLEQSEATIGVDFRSRNLTL-DG 70
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + T+GVDF R V +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVEL 52
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|403346064|gb|EJY72416.1| RAB-2,4,14, putative [Oxytricha trifallax]
Length = 222
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR V +++
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFRQQHDLTIGVEFGARTVQIQN 52
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + + DG
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI-DG 58
>gi|339252040|ref|XP_003371243.1| GTP-binding protein Ypt3 [Trichinella spiralis]
gi|316968547|gb|EFV52812.1| GTP-binding protein Ypt3 [Trichinella spiralis]
Length = 330
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 28 VTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKTTIGVEFATRSIQV-DG 83
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ +P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 25 SXNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 77
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVV-DG 57
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FDY F+L+LIGDS+VGKS L F D + + T+GVDF R + M
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEM 52
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
M+ D +DY F+++LIGDS VGK++LL FT +F S T+GV+F R V
Sbjct: 1 MSRDDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSV 52
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
M+ D +DY F+++LIGDS VGK++LL FT +F S T+GV+F R V
Sbjct: 1 MSRDDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSV 52
>gi|255558460|ref|XP_002520255.1| protein with unknown function [Ricinus communis]
gi|223540474|gb|EEF42041.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
F+Y F+L+LIGDS VGKSSLL FT F ++S PT+GVDF + VT+
Sbjct: 10 FEYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLS-PTIGVDFKVQYVTI 56
>gi|388517279|gb|AFK46701.1| unknown [Lotus japonicus]
Length = 209
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FDY F+L++IGDS VGKSSLL FT +F ++S PT+GVDF + V +
Sbjct: 10 FDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMS-PTIGVDFKVKYVAI 56
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D DY F+ +LIGDS VGKS+L+ F +F S PT+GV+F R + +RD
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 ADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD 59
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
DY F+L+LIGDS VGKSSLL F D + E T+GVDF R + + DG
Sbjct: 35 DYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 83
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FDY F+L+LIGDS+VGKS L F D + + T+GVDF R + M
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEM 52
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + + DG
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI-DG 58
>gi|76163225|gb|ABA40921.1| YptC4 [Schistosoma japonicum]
Length = 77
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + D
Sbjct: 3 YAYLFKYIIIGDTAVGKSCLLLQFTDQRFQPVYDLTIGVEFGARMVNIGD 52
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++ +FDY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 5 INQIFDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 58
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 4 LSPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 55
>gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus]
Length = 207
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FDY F+L++IGDS VGKSSLL FT +F ++S PT+GVDF + V +
Sbjct: 8 FDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMS-PTIGVDFKVKYVAI 54
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|169806184|ref|XP_001827837.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
gi|161779285|gb|EDQ31308.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
Length = 225
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
FDY F+++LIGDS VGK+++L KF E S PT+GV+F
Sbjct: 22 FDYLFKIVLIGDSGVGKTNILAKLLSNKFYENSKPTIGVEF 62
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b;
AltName: Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|428165742|gb|EKX34731.1| hypothetical protein GUITHDRAFT_175416 [Guillardia theta
CCMP2712]
Length = 201
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
FD++F+L+L GDS VGKSS+L FTD FA T+GVDF
Sbjct: 8 FDHRFKLLLTGDSGVGKSSILLRFTDDSFATDQPATIGVDF 48
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVE-QDG 54
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|325181703|emb|CCA16157.1| Rab2 family GTPase putative [Albugo laibachii Nc14]
Length = 586
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ + F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ +
Sbjct: 379 YAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI 426
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + DG +
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV-DGKLI 61
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + +
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|5738168|gb|AAD50281.1|AF169951_1 putative intermediate compartment protein [Tetrahymena
thermophila]
Length = 211
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVT 53
+ Y F+ I+IGD+ VGKS +L F D +F E D T+GV+F AR+++
Sbjct: 3 YAYLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMIS 49
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + +
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + +
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQV-DG 58
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + +
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + +
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQI 56
>gi|146182702|ref|XP_001025075.2| Ras family protein [Tetrahymena thermophila]
gi|146143741|gb|EAS04830.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777762|dbj|BAJ21277.1| Rab-family small GTPase Rab2A [Tetrahymena thermophila]
Length = 211
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVT 53
+ Y F+ I+IGD+ VGKS +L F D +F E D T+GV+F AR+++
Sbjct: 3 YAYLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMIS 49
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDD 59
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c;
AltName: Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis
thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis
thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
gi|116784353|gb|ABK23312.1| unknown [Picea sitchensis]
Length = 208
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
FD+ F+L++IGDS VGKSSLL FT F ++S PT+GVDF +L+T+
Sbjct: 10 FDHVFKLLMIGDSGVGKSSLLLRFTSDSFDDLS-PTIGVDFKLKLMTI 56
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis
subvermispora B]
Length = 212
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
FDY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINV-DG 56
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + DG
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNL-DG 59
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATR 52
>gi|308159460|gb|EFO61990.1| Rab11 [Giardia lamblia P15]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D+ ++LILIGDS VGKS++L FT KF S T+GV+F + +T+
Sbjct: 5 YDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTV 52
>gi|253742611|gb|EES99410.1| Rab11 [Giardia intestinalis ATCC 50581]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D+ ++LILIGDS VGKS++L FT KF S T+GV+F + +T+
Sbjct: 5 YDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTV 52
>gi|159117346|ref|XP_001708893.1| Rab11 [Giardia lamblia ATCC 50803]
gi|28628539|gb|AAO49245.1|AF460175_1 GTPase Rab11-like protein [Giardia intestinalis]
gi|157437007|gb|EDO81219.1| Rab11 [Giardia lamblia ATCC 50803]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D+ ++LILIGDS VGKS++L FT KF S T+GV+F + +T+
Sbjct: 5 YDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTV 52
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine
max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine
max]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + DG +
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINV-DGKLI 61
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFL 60
FDY F+++LIGDS VGKS+LL FT +F + T+GV+F R +++ DG L
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISV-DGKTL 59
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 59
>gi|168018849|ref|XP_001761958.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162687013|gb|EDQ73399.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
FD F+++LIG+S VGKSSLL FT GKF ++S PT+GVDF +++ ++
Sbjct: 9 FDNLFKILLIGNSGVGKSSLLLRFTAGKFDDLS-PTIGVDFKVKMLNLQ 56
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 10 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 64
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana)
tropicalis]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Monodelphis domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 48 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 102
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 34 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 88
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 51 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 105
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 26 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 80
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 63 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 117
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis
niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 131 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 185
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 37 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 91
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
T+ DY F++++IGDS VGK+ LL FT +F S T+GV+F R VT++
Sbjct: 20 TMPEKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQ 73
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
+DY F++++IGD++VGKSS+L FTD F E T+GVDF
Sbjct: 11 YDYLFKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDF 51
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 48 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 102
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
MT FDY F+++LIGDS VGKS+LL FT +F + T+GV+F R + +
Sbjct: 1 MTEQSNFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINV 54
>gi|449473409|ref|XP_002186832.2| PREDICTED: uncharacterized protein LOC100219191 [Taeniopygia
guttata]
Length = 423
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
FD+ F+L+LIGD++VGK+ L++ F G F+E T+GVDF
Sbjct: 225 FDFLFKLVLIGDASVGKTCLVQRFKTGAFSERQGSTIGVDF 265
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|393220280|gb|EJD05766.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 214
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY + I+ GD+ VGKSSLL TD +F DPT+GV+F ++L+ + D
Sbjct: 4 WDYVLKFIICGDAAVGKSSLLVRLTDQRFLANPDPTLGVEFGSKLIYIPD 53
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS +L F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIEL-DG 54
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +
Sbjct: 3 TKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 53
>gi|357123588|ref|XP_003563492.1| PREDICTED: ras-related protein RABA2b-like [Brachypodium
distachyon]
Length = 183
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R + +
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIE 57
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +
Sbjct: 3 TKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 53
>gi|449019525|dbj|BAM82927.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 222
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+ Y F+ I+IG S GKS LL FTD +F D T+GV+F R +T R+G
Sbjct: 5 YAYLFKFIIIGSSATGKSCLLLRFTDDRFQVTHDLTIGVEFGTRTLTARNG 55
>gi|229594642|ref|XP_001033234.3| Ras family protein [Tetrahymena thermophila]
gi|225566726|gb|EAR85571.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777756|dbj|BAJ21274.1| Rab-family small GTPase Rab1F [Tetrahymena thermophila]
Length = 211
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
M++ +DY F++ + G S+VGKSSL+ FTD F + PT+GVDF R T+
Sbjct: 1 MSLQQDYDYAFKIAITGSSSVGKSSLMMRFTDDVFNVVLIPTIGVDFKIRSFTV 54
>gi|47222068|emb|CAG12094.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D FD+ F++ILIGDS VGK+ +++ F G F+ T+GVDF R V +
Sbjct: 9 DDSFDFLFKIILIGDSNVGKTCVVQNFKSGTFSAKQQNTIGVDFSVRTVEI 59
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV-DG 57
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV-DG 57
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M + +DY F+++LIGDS GKS+LL FT +F+ S T+GV+F R +++ DG
Sbjct: 219 MAAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISV-DG 274
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D DY F+ +LIGDS VGKS+L+ F +F S PT+GV+F R + +RD
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M + +DY F+++LIGDS GKS+LL FT +F+ S T+GV+F R +++ DG
Sbjct: 1 MAAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISV-DG 56
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V +DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDG 54
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + DG
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQV-DG 58
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D DY F+ +LIGDS VGKS+L+ F +F S PT+GV+F R + +RD
Sbjct: 7 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRD 59
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 1 MTVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
M + +DY F+++LIGDS GKS+LL FT +F+ S T+GV+F R +++ DG
Sbjct: 1 MAAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISV-DG 56
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R + +
Sbjct: 6 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIEL 56
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
+D+ F+++LIGDS VGK++LL FT +F S PT+GV+F + V
Sbjct: 9 YDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTV 54
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDD 58
>gi|156366235|ref|XP_001627045.1| predicted protein [Nematostella vectensis]
gi|156213942|gb|EDO34945.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
+ + FDY F+++LIGD VGK+ +++ F G F E + T+GVDF R V
Sbjct: 5 STEEFFDYLFKIVLIGDPGVGKTCIVQRFRSGTFVERNGSTIGVDFTMRSV 55
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + DG
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQV-DG 58
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD 59
>gi|146181225|ref|XP_001022351.2| Ras family protein [Tetrahymena thermophila]
gi|146144246|gb|EAS02106.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777818|dbj|BAJ21305.1| Rab-family small GTPase Rab2F [Tetrahymena thermophila]
Length = 235
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
+DY F+ I+IGD+ VGKS +L F D +F E D T+GV+F ++++
Sbjct: 4 YDYLFKFIMIGDTGVGKSCMLLRFVDDRFREDYDATIGVEFGSKII 49
>gi|126328814|ref|XP_001373156.1| PREDICTED: ras-related protein Rab-39A-like [Monodelphis
domestica]
Length = 219
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDP--TVGVDFFARLVTMRDG 57
+QFR++L+GD+ VGK+SLL+ + +G F P TVGV+F++R++ + G
Sbjct: 12 HQFRILLLGDADVGKTSLLQRYIEGDFGADPPPSSTVGVEFYSRMLQLASG 62
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R +
Sbjct: 7 DEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSI 55
>gi|431910239|gb|ELK13312.1| Ras-related protein Rab-1B [Pteropus alecto]
Length = 247
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R + +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL 52
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +++
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|145496208|ref|XP_001434095.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833796|emb|CAI39360.1| rab_A46 [Paramecium tetraurelia]
gi|124401218|emb|CAK66698.1| unnamed protein product [Paramecium tetraurelia]
Length = 197
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 35/46 (76%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
F++IL+GDS VGKSS+LK +++ F+E PT+G+ F+ ++V ++
Sbjct: 8 FKIILLGDSNVGKSSILKRYSENTFSEQQAPTIGLAFYKKVVERKN 53
>gi|145540750|ref|XP_001456064.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833749|emb|CAI39344.1| rab_B20 [Paramecium tetraurelia]
gi|124423874|emb|CAK88667.1| unnamed protein product [Paramecium tetraurelia]
Length = 225
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+DY F+L++IG+S VGKSSLL F D +F+E T+GVDF R
Sbjct: 5 YDYLFKLVIIGNSGVGKSSLLLRFADDQFSESYLTTIGVDFRFR 48
>gi|145549135|ref|XP_001460247.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834498|emb|CAI44563.1| rab_A40 [Paramecium tetraurelia]
gi|124428076|emb|CAK92850.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+DY F+L++IG+S VGKSSLL F D +F+E T+GVDF R
Sbjct: 5 YDYLFKLVIIGNSGVGKSSLLLRFADDQFSESYLTTIGVDFRFR 48
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +++
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +++
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 54
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +++
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +++
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV 55
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D+ F+L++IGDS VGKSSLL F D F+ T+GVDF R VT+
Sbjct: 10 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI 57
>gi|145537818|ref|XP_001454620.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422386|emb|CAK87223.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+DY F+L++IG+S VGKSSLL F D +F+E T+GVDF R
Sbjct: 5 YDYLFKLVIIGNSGVGKSSLLLRFADDQFSESYLTTIGVDFRFR 48
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 1 MTVDP--LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
M+V P +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R V
Sbjct: 1 MSVRPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSV 54
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|145479417|ref|XP_001425731.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833719|emb|CAI39333.1| rab_B47 [Paramecium tetraurelia]
gi|124392803|emb|CAK58333.1| unnamed protein product [Paramecium tetraurelia]
Length = 250
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAF 59
D F Y F+ I+IGD VGKS LL F D +F D T+GV+F AR++ +++ A
Sbjct: 12 DTSFVYLFKYIIIGDMAVGKSCLLMQFIDKRFRSKHDVTIGVEFGARIIRIQNVAL 67
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+++LIGDS VGKSSLL FT +F S T+GV+F R + + DG
Sbjct: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DG 57
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+++LIGDS VGKSSLL FT +F S T+GV+F R + + DG
Sbjct: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DG 57
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
D +DY F+L+LIGDS VGKS+LL FT +F S T+GV+F + +T+
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTV 57
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATR 53
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus
tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus
tauri]
Length = 214
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY F+++L+GDS VGKS+LL FT +F S T+GV+F R + +++
Sbjct: 8 YDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQN 57
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVEL-DG 54
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + D
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDD 58
>gi|145477051|ref|XP_001424548.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833831|emb|CAI39371.1| rab_A12 [Paramecium tetraurelia]
gi|124391613|emb|CAK57150.1| unnamed protein product [Paramecium tetraurelia]
Length = 228
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
++Y F+ I++GD+ VGKS LL FT+ KF + ++ TVGV+F + + + D
Sbjct: 5 YNYMFKFIVVGDTNVGKSCLLLQFTENKFCDHTESTVGVEFGYKTIKLND 54
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 1 MTVDPLFD----YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
M D +FD Y F+ +LIGDS VGKS+LL F +F S PT+GV+F R + +RD
Sbjct: 1 MDQDAIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRD 60
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R +
Sbjct: 10 YDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTI 55
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + +
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNE 59
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R + + DG
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIEL-DG 54
>gi|170103194|ref|XP_001882812.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642183|gb|EDR06440.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 233
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
Y F+ I+ GD+ VGKSSLL TD +F DPT+GV+F ++L+T+
Sbjct: 8 YVFKFIITGDAAVGKSSLLIRLTDQRFLVNPDPTLGVEFGSKLITI 53
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d;
AltName: Full=Ras-related protein Rab11B;
Short=AtRab11B; AltName: Full=Ras-related protein SGBP;
Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D +DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R + + +
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNE 59
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
VD +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 VDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+DY F+++LIGDS VGKS+LL FT +F+ S T+GV+F R
Sbjct: 73 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATR 116
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 TVDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
T D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 3 TRDDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DG 57
>gi|124087881|ref|XP_001346913.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia strain
d4-2]
gi|145474789|ref|XP_001423417.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057302|emb|CAH03286.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia]
gi|74834222|emb|CAI44486.1| rab_C66 [Paramecium tetraurelia]
gi|124390477|emb|CAK56019.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+++Y F+ I++GD+ VGKS LL FTD +F D T+GV+F +R
Sbjct: 3 IYNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSR 47
>gi|213514896|ref|NP_001134562.1| ras-related protein Rab-35 [Salmo salar]
gi|209734286|gb|ACI68012.1| Ras-related protein Rab-35 [Salmo salar]
gi|209734894|gb|ACI68316.1| Ras-related protein Rab-35 [Salmo salar]
Length = 201
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+L++IGDS VGKSSLL F D F+ T+GVDF R V +
Sbjct: 5 YDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVVI 52
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D+ F+L++IGDS VGKSSLL F D F+ T+GVDF R VT+
Sbjct: 10 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI 57
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D+ F+L++IGDS VGKSSLL F D F+ T+GVDF R VT+
Sbjct: 10 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI 57
>gi|402218220|gb|EJT98297.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 222
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
D + + + I++GD+ VGKSS+L FTD +F DPT+GV+F ++LV + D
Sbjct: 3 DLTWQFIIKFIIVGDAGVGKSSILIRFTDSRFLANPDPTLGVEFGSKLVHLAD 55
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+L+LIGDS+VGKS LL F D + + T+GVDF R V + DG
Sbjct: 6 YDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVEL-DG 55
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
++P +D+ F+L+LIGDS VGKS LL F D + E T+GVDF R + + DG
Sbjct: 1 MNPEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DG 54
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIR 48
>gi|145539502|ref|XP_001455441.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833837|emb|CAI39373.1| rab_A09 [Paramecium tetraurelia]
gi|124423249|emb|CAK88044.1| unnamed protein product [Paramecium tetraurelia]
Length = 252
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAF 59
D F Y F+ I+IGD VGKS LL F D +F D T+GV+F AR++ +++ A
Sbjct: 12 DTSFVYLFKYIIIGDMAVGKSCLLMQFIDKRFRSKHDVTIGVEFGARIIRIQNVAL 67
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
P +DY F+L+LIGDS VGKS LL F D + + T+GVDF R V + DG
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEL-DG 54
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+D+ F+L++IGDS VGKSSLL F D F+ T+GVDF R VT+
Sbjct: 37 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTI 84
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGA 58
YQF+L+L+G+S VGKSSL+ F +F + + T+G F + V++ DG+
Sbjct: 5 YQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLEDGS 54
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+L+LIGDS+VGKS LL F D + + T+GVDF R V + DG
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEL-DG 54
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
VD +DY F+++LIGDS VGKS+LL FT +F S T+GV+F
Sbjct: 5 VDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEF 49
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
DY F+++L+GDS VGKS+LL FT +F S T+GV+F + + + DG
Sbjct: 10 DYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDG 59
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMR 55
+DY F+L+LIGDS+VGKS LL F D + + T+GVDF R V ++
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQ 53
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV-DG 58
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV-DG 58
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV-DG 58
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV-DG 58
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + + DG
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQV-DG 58
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R V + DG
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQV-DG 58
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
+D +DY F+++LIGDS VGKS++L FT +F S T+GV+F R
Sbjct: 5 IDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLV 52
+D+ F+L+LIGD+ VGKSS+L FTD F + T+GVDF +++
Sbjct: 46 YDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMI 91
>gi|50754287|ref|XP_414313.1| PREDICTED: ras-related protein Rab-43 [Gallus gallus]
Length = 215
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
+D+ F+L+LIGD++VGK+ L++ F G FAE T+GVDF
Sbjct: 17 YDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDF 57
>gi|47217560|emb|CAG02487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+L++IGDS VGKSSLL F D F+ T+GVDF R V +
Sbjct: 10 YDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI 57
>gi|319401899|ref|NP_001187352.1| ras-related protein Rab-35 [Ictalurus punctatus]
gi|308322789|gb|ADO28532.1| ras-related protein rab-35 [Ictalurus punctatus]
Length = 201
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+DY F+L++IGDS VGKSSLL F D F+ T+GVDF R V +
Sbjct: 5 YDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEI 52
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR 52
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR 52
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 4 DPLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFAR 50
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR 52
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.333 0.149 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 968,902,594
Number of Sequences: 23463169
Number of extensions: 28443686
Number of successful extensions: 175037
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9017
Number of HSP's successfully gapped in prelim test: 483
Number of HSP's that attempted gapping in prelim test: 165821
Number of HSP's gapped (non-prelim): 9532
length of query: 64
length of database: 8,064,228,071
effective HSP length: 36
effective length of query: 28
effective length of database: 7,219,553,987
effective search space: 202147511636
effective search space used: 202147511636
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 69 (31.2 bits)