RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy43
(64 letters)
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 64.1 bits (155), Expect = 2e-15
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+DY F+L+LIG+S VGKS LL F+D + T+GVDF + V +
Sbjct: 3 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 59
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 61.4 bits (148), Expect = 2e-14
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
+D+ F+++LIG++ VGK+ L++ FT G F T+GVDF + V +
Sbjct: 2 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 59
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 59.8 bits (144), Expect = 7e-14
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
+DY F+L+LIGDS VGK+ +L F++ F T+G+DF R + +
Sbjct: 3 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 60
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 59.1 bits (142), Expect = 1e-13
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
+DY +L+ +GDS VGK++ L +TD KF TVG+DF + V
Sbjct: 2 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA 51
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 56.4 bits (135), Expect = 2e-12
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+DY F+++LIGDS VGKS+LL FT +F S T+GV+F R + +
Sbjct: 1 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 57
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 55.9 bits (134), Expect = 2e-12
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
+++LIGDS VGKS LL F + KF T+G+DF + V +
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIW 56
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 55.1 bits (131), Expect = 6e-12
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
++I++GDS VGK+SL+ + + KF+ T+G DF + V + D
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 55
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 54.1 bits (129), Expect = 9e-12
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
FDY F++++IG+S+VGK+S L + D F TVG+DF + + D
Sbjct: 2 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 59
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 54.6 bits (130), Expect = 1e-11
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+ +++GD VGK+ LL +T KF PTV ++ ++ + L F
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLF 56
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 54.2 bits (129), Expect = 1e-11
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+D+ F+ ++IG++ GKS LL F + KF + S+ T+GV+F ++++ +
Sbjct: 2 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI 58
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 53.9 bits (128), Expect = 1e-11
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+ +L+++GD GK+ LL + +F E+ PTV ++ A + L +
Sbjct: 2 RKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALW 55
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 53.5 bits (127), Expect = 2e-11
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+++L+++G VGKS+L F + DPT+ + ++V + L
Sbjct: 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL 56
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 52.2 bits (124), Expect = 5e-11
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+ Y F+ I+IGD VGKS LL FT+ KF T+GV+F R++ +
Sbjct: 1 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 57
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 52.3 bits (124), Expect = 6e-11
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+ +++GD VGK+ LL + + F E PTV D +A VT+ +L
Sbjct: 7 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGL 61
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 52.0 bits (123), Expect = 8e-11
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
QF+L+L+GD GK++ +K G+F + T+GV+ + G F
Sbjct: 3 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNV 56
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 52.2 bits (124), Expect = 9e-11
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
+ +L+L+G GKS+ +K + + PT G+
Sbjct: 2 ELKLLLLGTGESGKSTFIKQMRIIHGSGV--PTTGIIE 37
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 51.5 bits (122), Expect = 1e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+++L+++G VGKS+L F G F E DPT+ + ++ L
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEIL 56
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 51.2 bits (121), Expect = 1e-10
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
++RL+++G VGKS+L F F DPT+ + + V A L
Sbjct: 5 KYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDIL 58
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 51.2 bits (121), Expect = 2e-10
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
++I++GDS VGK+SL+ + + K+++ T+G DF + VT+ +
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQV 56
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 51.0 bits (121), Expect = 2e-10
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTV 43
Y F+ I+IGD+ VGKS LL FTD +F + D T+
Sbjct: 2 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTI 36
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 50.4 bits (119), Expect = 3e-10
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 5 PLFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
P +L+++G VGKS+L F F +SD ++ + DG
Sbjct: 1 PPPSETHKLVVVGGGGVGKSALTIQFIQSYF--VSDYDPTIEDSYTKICSVDGIPARLD 57
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 50.5 bits (119), Expect = 3e-10
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
+ +R++LIG+ VGKS+L F + SD V + M DG L
Sbjct: 1 NTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIIL 57
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 49.9 bits (118), Expect = 4e-10
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVG 44
+++++++G VGKS+L F G F E DPT+
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE 37
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 50.0 bits (118), Expect = 4e-10
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
QF+L+L+G+S VGKSSL+ F G+F E + T+G F
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL 44
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 50.1 bits (119), Expect = 6e-10
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
++ RL+L+G GKS+++K T G+
Sbjct: 2 VYRATHRLLLLGAGESGKSTIVKQMRILHVV----LTSGIFE 39
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 49.5 bits (117), Expect = 6e-10
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDP 41
+D F+++L+GDS VGK+ LL F DG F +
Sbjct: 3 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFI 37
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 49.2 bits (116), Expect = 7e-10
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTV 43
+R+ + G VGKSSL+ F G F E PTV
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTV 35
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 48.9 bits (115), Expect = 9e-10
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTV 43
+ +L + G + VGKS+L+ F +F DPT+
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTL 35
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 49.2 bits (116), Expect = 9e-10
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
++I++G VGKS+L F +F E +PT +
Sbjct: 5 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR 42
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 48.9 bits (115), Expect = 1e-09
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
F++I+IGDS VGK+ L F G+F + ++ T+GVDF R V +
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQL 55
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 48.9 bits (115), Expect = 1e-09
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
+ +++++GDS GK++LL F F E PTV ++
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT 40
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 48.4 bits (114), Expect = 2e-09
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
F+L+ +G+ +VGK+SL+ F F T+G+DF ++ + + D
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLED 46
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 48.7 bits (115), Expect = 2e-09
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
++++IG+S VGKSSLL FTD F T+GVDF + +++
Sbjct: 8 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 60
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 48.1 bits (113), Expect = 2e-09
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
+ L L+G GK++ + G+F E PTVG +
Sbjct: 2 EMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR 40
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 48.0 bits (113), Expect = 2e-09
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
Y F+++L+G+ VGK+SL+ + + KF + T+G F + + +
Sbjct: 2 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAI 56
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 47.8 bits (112), Expect = 3e-09
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
++ ++G +VGKSSL F +G+F + DPT+ F
Sbjct: 4 SRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFT 42
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 47.4 bits (111), Expect = 3e-09
Identities = 9/53 (16%), Positives = 24/53 (45%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
++++L+G VGKS+L + F + ++ + +V + + +
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYD 54
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 47.6 bits (112), Expect = 4e-09
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
F++IL+GD VGKSSL+ + KF T+GV+F
Sbjct: 4 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFL 44
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 47.3 bits (111), Expect = 4e-09
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
+ ++ L+GD+ VGKSS++ F + F +PT+G F
Sbjct: 4 ELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFM 42
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 47.3 bits (111), Expect = 4e-09
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
++L+++GD VGKS+L F F DPT+ +
Sbjct: 5 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYL 42
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 47.3 bits (111), Expect = 4e-09
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTV 43
+ +++GD VGK+ LL +T F PTV
Sbjct: 5 AIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 38
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 46.6 bits (109), Expect = 7e-09
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPT 42
+ R++++G GK+++L G+
Sbjct: 5 EMRILILGLDGAGKTTILYRLQVGEVVTTIPTI 37
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 46.2 bits (108), Expect = 1e-08
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 12 RLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGV 45
+L+ +G GK++LL + + A + PT
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQ-PTWHP 34
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 45.8 bits (107), Expect = 2e-08
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEIS 39
+ RL+++G GK+++LK F IS
Sbjct: 2 ELRLLMLGLDNAGKTTILKKFNGEDVDTIS 31
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 46.2 bits (108), Expect = 2e-08
Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Query: 14 ILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTM 54
+ +G GK+ L G++ + ++ V
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNN 43
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 45.7 bits (107), Expect = 2e-08
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+ RL ++GD+ GKSSL+ F G + ++ + T + ++ +
Sbjct: 5 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIR 57
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 44.7 bits (104), Expect = 4e-08
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 12 RLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
+L+L+G++ VGKSS++ F FAE +PT+G F
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFL 41
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 44.7 bits (104), Expect = 4e-08
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 12 RLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+++++G+ VGKSS+++ + G F + T+GVDF R + + D
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLML 55
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 45.0 bits (105), Expect = 4e-08
Identities = 13/56 (23%), Positives = 16/56 (28%), Gaps = 4/56 (7%)
Query: 9 YQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
YQ +I+ G GK+SLL T PTV
Sbjct: 2 YQPSIIIAGPQNSGKTSLLTLLTTDSVR----PTVVSQEPLSAADYDGSGVTLVDF 53
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 43.7 bits (102), Expect = 1e-07
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF 47
+++L+G GKS+ LK + DPT G+
Sbjct: 2 LVKILLLGAGESGKSTFLKQM---RIIHGQDPTKGIHE 36
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 43.4 bits (101), Expect = 1e-07
Identities = 11/54 (20%), Positives = 18/54 (33%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
+ +L+L+G GKS+++K A F M D
Sbjct: 2 EVKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSE 55
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 43.1 bits (100), Expect = 1e-07
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 12 RLILIGDSTVGKSSLLKYFTDGKFAEISDPT 42
R++++G GK+++L G+
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTI 32
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 42.8 bits (99), Expect = 2e-07
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 6 LFDYQFRLILIGDSTVGKSSLLKYFTDGKFAEI 38
L+ +L+ +G GK++LL D + +
Sbjct: 9 LYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH 41
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 42.3 bits (98), Expect = 4e-07
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
+ R++++G GK+++L G+ PT+G +
Sbjct: 17 ELRILILGLDGAGKTTILYRLQIGEVVTTK-PTIGFNVE 54
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 41.5 bits (96), Expect = 7e-07
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDP 41
+ ++I++G GK+++L F+ + S
Sbjct: 15 EHKVIIVGLDNAGKTTILYQFSMNEVVHTSPT 46
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 41.1 bits (95), Expect = 9e-07
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 10 QFRLILIGDSTVGKSSLLKYFTDGKFAEISDPT 42
+ R++++G GK+++L G+
Sbjct: 12 EMRILMLGLDAAGKTTILYKLKLGQSVTTIPTV 44
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 41.1 bits (95), Expect = 1e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPT 42
D + R++L+G GK++LLK + I+
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQ 48
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 39.3 bits (90), Expect = 4e-06
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISD 40
++++ G GKSSLL + A ++D
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTD 31
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 37.8 bits (86), Expect = 2e-05
Identities = 16/56 (28%), Positives = 20/56 (35%)
Query: 8 DYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
D + G S GKSS L T+ K + T G L + DG L
Sbjct: 14 DTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDL 69
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 35.8 bits (81), Expect = 9e-05
Identities = 10/53 (18%), Positives = 18/53 (33%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
++ ++G VGKS+L + + A +S DG
Sbjct: 9 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFV 61
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 34.2 bits (77), Expect = 3e-04
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 12 RLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
R++++G VGKS+LL + A ++D + G
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIV 53
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 34.3 bits (77), Expect = 3e-04
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISD 40
++G VGKS+LL K A IS
Sbjct: 10 IVGKPNVGKSTLLNNLLGVKVAPISP 35
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 33.6 bits (75), Expect = 5e-04
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISD 40
++G VGKS+L K A + D
Sbjct: 5 IVGRPNVGKSTLFNKLVKKKKAIVED 30
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 33.5 bits (75), Expect = 6e-04
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRD 56
++G VGKS+LL K + S +
Sbjct: 10 IVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEG 51
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle
domain {Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 32.6 bits (73), Expect = 0.001
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
L+G +VGKS+LL + K + +V DG
Sbjct: 6 LVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDG 48
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle
domain {Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 32.3 bits (72), Expect = 0.001
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISDPTVGVD 46
L+G GKSSLL T P +
Sbjct: 6 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLS 37
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 32.1 bits (72), Expect = 0.002
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISD 40
++++G VGKSS + + IS
Sbjct: 33 LTILVMGKGGVGKSSTVNSIIGERVVSISP 62
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 32.0 bits (71), Expect = 0.002
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 14 ILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFF 48
I G S VGKS+L+ T K P V
Sbjct: 4 IFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKII 38
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 29.7 bits (65), Expect = 0.014
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEISDPTVG 44
L G S VGKSS + + K + G
Sbjct: 28 LAGRSNVGKSSFINSLINRKNLARTSSKPG 57
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 28.6 bits (63), Expect = 0.029
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 7/38 (18%)
Query: 15 LIGDSTVGKSSLLKYFTDGKFAEIS-------DPTVGV 45
++G VGKS+ + T + DP
Sbjct: 15 IVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAK 52
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 27.5 bits (60), Expect = 0.071
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 12 RLILIGDSTVGKSSLLKYFTDGKF 35
++ ++G + GKSS+L+ F F
Sbjct: 28 QIAVVGGQSAGKSSVLENFVGRDF 51
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 27.4 bits (60), Expect = 0.078
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 11 FRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGV 45
+ + G++ GKSS + E GV
Sbjct: 57 LNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGV 91
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 27.3 bits (59), Expect = 0.099
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 12 RLILIGDSTVGKSSLLK 28
++I+ G+ VGK++L+K
Sbjct: 2 KIIITGEPGVGKTTLVK 18
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 27.1 bits (59), Expect = 0.11
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 12 RLILIGDSTVGKSSLLKYFT 31
+++++G + GKSS+L+
Sbjct: 26 QIVVVGSQSSGKSSVLENIV 45
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 26.4 bits (57), Expect = 0.18
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 13 LILIGDSTVGKSSLLKY 29
++L G S GKS+LLK
Sbjct: 3 VVLSGPSGAGKSTLLKK 19
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 26.1 bits (57), Expect = 0.22
Identities = 9/52 (17%), Positives = 18/52 (34%)
Query: 13 LILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCFL 64
++L G S +GKS + + D + + + R F+
Sbjct: 18 VLLTGRSGIGKSECALDLINKNHLFVGDDAIEIYRLGNRLFGRAQEVAKKFM 69
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 26.1 bits (56), Expect = 0.26
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 13 LILIGDSTVGKSSLLKY 29
+++ G S GKS+LLK
Sbjct: 4 IVISGPSGTGKSTLLKK 20
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 25.6 bits (55), Expect = 0.38
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 13 LILIGDSTVGKSSLLKY 29
I+ S GKSSL++
Sbjct: 5 YIVSAPSGAGKSSLIQA 21
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 25.6 bits (55), Expect = 0.39
Identities = 5/17 (29%), Positives = 9/17 (52%)
Query: 13 LILIGDSTVGKSSLLKY 29
L+L+G VG+ +
Sbjct: 6 LVLLGAHGVGRRHIKNT 22
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 24.9 bits (54), Expect = 0.63
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 8/38 (21%)
Query: 15 LIGDSTVGKSSLLKYFTDGK-------FAEISDPTVGV 45
++G VGKS+L T F I +P GV
Sbjct: 7 IVGLPNVGKSTLFNALTKAGIEAANYPFCTI-EPNTGV 43
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 25.0 bits (53), Expect = 0.67
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 12 RLILIGDSTVGKSSLLKY 29
+ +L+G GKS++ +
Sbjct: 3 KAVLVGLPGSGKSTIGRR 20
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 24.9 bits (53), Expect = 0.70
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 8/38 (21%)
Query: 15 LIGDSTVGKSSLLKYFTDGK-------FAEISDPTVGV 45
++G VGKS+ T F I + VGV
Sbjct: 5 VVGKPNVGKSTFFSAATLVDVEIANYPFTTI-EANVGV 41
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 24.6 bits (52), Expect = 0.87
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 13 LILIGDSTVGKSSLLKY 29
++L G S VGKS++++
Sbjct: 5 VVLSGPSAVGKSTVVRC 21
>d1jv2a3 b.1.15.1 (A:738-956) Thigh, calf-1 and calf-2 domains of
integrin alpha {Human (Homo sapiens) [TaxId: 9606]}
Length = 219
Score = 24.6 bits (53), Expect = 0.88
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 3 VDPLFDYQFRLILIGDSTVGKSSL 26
V P+ + + L G S+ K+ L
Sbjct: 35 VGPVVQHIYELRNNGPSSFSKAML 58
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 24.6 bits (53), Expect = 0.99
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 14 ILIGDSTVGKSSL 26
+LIG+ VGK+++
Sbjct: 47 VLIGEPGVGKTAI 59
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 24.3 bits (51), Expect = 1.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 14 ILIGDSTVGKSSLLK 28
++IG + GKSSLL
Sbjct: 27 LIIGQNGSGKSSLLD 41
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 24.1 bits (52), Expect = 1.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 13 LILIGDSTVGKSSLLKYFTDGKFAEISD 40
+++ GDS VGKS I+D
Sbjct: 17 VLITGDSGVGKSETALELVQRGHRLIAD 44
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a
[TaxId: 3885]}
Length = 228
Score = 24.0 bits (51), Expect = 1.7
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 7 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDGAFLFCF 63
F +LIL G++T+ L+ G ++G F++ + ++D + F
Sbjct: 11 FHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSNNVASF 67
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 23.9 bits (50), Expect = 1.7
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 13 LILIGDSTVGKSSLLKYF 30
+++G GKSS++K
Sbjct: 32 TLVLGLRRTGKSSIIKIG 49
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 23.4 bits (50), Expect = 2.2
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 13 LILIGDSTVGKSSL 26
+++ GDS +GKS
Sbjct: 18 VLITGDSGIGKSET 31
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 23.3 bits (49), Expect = 2.7
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 13 LILIGDSTVGKSSLLKY 29
++ IG GKS+L +
Sbjct: 3 IVFIGFMGSGKSTLARA 19
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 23.1 bits (49), Expect = 2.7
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Query: 14 ILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDF------FARLVTMRDGAFLF 61
+ G S VGKSSLL G +S+ + + A+L+ G ++
Sbjct: 99 TMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYVV 152
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 22.6 bits (48), Expect = 4.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 13 LILIGDSTVGKSSLLK 28
++ +G S GKS+LL+
Sbjct: 29 VVFVGPSGCGKSTLLR 44
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 22.3 bits (47), Expect = 5.1
Identities = 4/16 (25%), Positives = 10/16 (62%)
Query: 13 LILIGDSTVGKSSLLK 28
+++G + GK+ L+
Sbjct: 29 FVILGPTGAGKTLFLE 44
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 22.3 bits (47), Expect = 5.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 13 LILIGDSTVGKSSLLK 28
+L+G + GKS L+
Sbjct: 27 CVLLGPTGAGKSVFLE 42
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 22.2 bits (47), Expect = 5.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 13 LILIGDSTVGKSSLLK 28
+IL+G S GK++ L+
Sbjct: 32 MILLGPSGCGKTTTLR 47
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)
[TaxId: 3847]}
Length = 251
Score = 22.0 bits (46), Expect = 6.8
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 13 LILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
+IL GD+ V S L+ + ++G ++ + + D
Sbjct: 18 MILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDK 62
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree
(Erythrina crista-galli) [TaxId: 49817]}
Length = 239
Score = 21.5 bits (45), Expect = 9.9
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 13 LILIGDSTVGKSSLLKYFTDGKFAEISDPTVGVDFFARLVTMRDG 57
L L G + + +S +L+ + + + G + + V M D
Sbjct: 18 LTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDS 62
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.333 0.149 0.450
Gapped
Lambda K H
0.267 0.0387 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 242,804
Number of extensions: 8516
Number of successful extensions: 158
Number of sequences better than 10.0: 1
Number of HSP's gapped: 157
Number of HSP's successfully gapped: 100
Length of query: 64
Length of database: 2,407,596
Length adjustment: 33
Effective length of query: 31
Effective length of database: 1,954,506
Effective search space: 60589686
Effective search space used: 60589686
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 47 (22.8 bits)