Your job contains 1 sequence.
>psy4300
MRKTTFGFLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLAD
STVWSCIDSFLTAMSQPQIQCQYIKWPTEEESVIIERNFRALAKFPGVIGAIDGCHIEGK
FSKDIRNDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYG
PTSLLYRDEYHLLGDSAYPLRTWCMVPYKNFGHMTEEEKKYNTALSKTRVPIENVFGLIK
GRWRRLKYIDVGDPKRMAYIISAACVLHNFCYLQDDVVEEIITHPIENQMHQRGPGGLRT
SSRISQA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4300
(307 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050327-32 - symbol:zgc:113227 "zgc:113227" ... 292 8.4e-26 1
UNIPROTKB|Q17QR8 - symbol:HARBI1 "Putative nuclease HARBI... 264 7.8e-23 1
UNIPROTKB|Q96MB7 - symbol:HARBI1 "Putative nuclease HARBI... 264 7.8e-23 1
UNIPROTKB|E2RCW9 - symbol:HARBI1 "Uncharacterized protein... 262 1.3e-22 1
UNIPROTKB|F1SIA2 - symbol:HARBI1 "Uncharacterized protein... 259 2.6e-22 1
TAIR|locus:2123874 - symbol:AT4G29780 "AT4G29780" species... 265 3.3e-22 1
UNIPROTKB|E1BQ99 - symbol:HARBI1 "Uncharacterized protein... 251 1.9e-21 1
TAIR|locus:2143104 - symbol:AT5G12010 species:3702 "Arabi... 257 2.0e-21 1
RGD|1584007 - symbol:Harbi1 "harbinger transposase derive... 246 6.3e-21 1
ZFIN|ZDB-GENE-081022-77 - symbol:zgc:194221 "zgc:194221" ... 241 4.3e-20 1
MGI|MGI:2443194 - symbol:Harbi1 "harbinger transposase de... 229 4.6e-19 1
TAIR|locus:2094088 - symbol:AT3G19120 species:3702 "Arabi... 223 3.0e-17 1
TAIR|locus:2077259 - symbol:AT3G63270 species:3702 "Arabi... 208 5.7e-15 1
ZFIN|ZDB-GENE-040608-1 - symbol:harbi1 "harbinger transpo... 204 1.2e-14 1
TAIR|locus:2099901 - symbol:AT3G55350 species:3702 "Arabi... 188 2.1e-12 1
TAIR|locus:504956234 - symbol:AT1G43722 "AT1G43722" speci... 170 1.5e-10 1
ZFIN|ZDB-GENE-020415-1 - symbol:tceb2 "transcription elon... 135 3.2e-06 1
ZFIN|ZDB-GENE-060810-147 - symbol:si:dkey-197c15.6 "si:dk... 133 4.8e-06 1
TAIR|locus:2207051 - symbol:AT1G72270 species:3702 "Arabi... 122 0.00099 1
>ZFIN|ZDB-GENE-050327-32 [details] [associations]
symbol:zgc:113227 "zgc:113227" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-050327-32 GeneTree:ENSGT00530000063045
InterPro:IPR026103 PANTHER:PTHR22930 eggNOG:NOG243843 EMBL:CR926129
EMBL:BC091804 IPI:IPI00506833 RefSeq:NP_001014341.1
UniGene:Dr.90965 Ensembl:ENSDART00000065568 GeneID:541506
KEGG:dre:541506 HOGENOM:HOG000198826 InParanoid:Q58EQ3 OMA:NDEWLEV
OrthoDB:EOG4C87T0 NextBio:20879288 Uniprot:Q58EQ3
Length = 415
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 80/251 (31%), Positives = 126/251 (50%)
Query: 30 VPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQIQCQYIKWPTE 89
VPV+K+ +AL +AT R + F + STV++C+ F +A+ + + ++K+P+
Sbjct: 114 VPVKKRVAIALCKLATGSEYRYVSQLFGVGVSTVFNCVQDFCSAVIKILVPV-HMKFPSP 172
Query: 90 EESVIIERNFRALAKFPGVIGAIDGCHIEGKFSKDIRNDYNNRKCTQSMILQGVCTSNKL 149
E+ + F P IG+ID HI + Y NRK S++LQ V N L
Sbjct: 173 EKLKEMADVFENCWNVPQCIGSIDAHHIPIIAPEKNPRGYLNRKGWHSVVLQAVVDGNGL 232
Query: 150 LTNIHVGCTGRNHDAKVLSTSQIG-----RRIDAYGPTSLLYRDE-YHLLGDSAYPLRTW 203
++ VG +G DA+VL S + R + + + D Y+L+GDSAYPL+ W
Sbjct: 233 FWDLCVGFSGNLSDARVLRQSYLWSLLSERDLLNHNKVDISGCDVGYYLIGDSAYPLQNW 292
Query: 204 CMVPYKNFGHMTEEEKKYNTALSKTRVPIENVFGLIKGRWR---RLKYIDVGDPKRMAYI 260
M P+ + G +T +++ +N+ LS R + F +K RW+ R V K+MA
Sbjct: 293 LMKPFPDIGGLTPQQESFNSRLSSARSVSDLSFKKLKARWQCLFRRNDCKVELVKKMAL- 351
Query: 261 ISAACVLHNFC 271
CVLHN C
Sbjct: 352 --TCCVLHNIC 360
>UNIPROTKB|Q17QR8 [details] [associations]
symbol:HARBI1 "Putative nuclease HARBI1" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0090305 GO:GO:0004518 EMBL:BC118217
IPI:IPI00696757 RefSeq:NP_001069136.1 UniGene:Bt.37438
STRING:Q17QR8 Ensembl:ENSBTAT00000006085 GeneID:514442
KEGG:bta:514442 CTD:283254 eggNOG:NOG137666
GeneTree:ENSGT00530000063045 HOGENOM:HOG000231449
HOVERGEN:HBG054543 InParanoid:Q17QR8 OMA:GDSSFFL OrthoDB:EOG479F79
NextBio:20871335 InterPro:IPR026103 InterPro:IPR026244
PANTHER:PTHR22930 PRINTS:PR02086 Uniprot:Q17QR8
Length = 349
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 88/287 (30%), Positives = 133/287 (46%)
Query: 8 FLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCI 67
+LVE L A T R + P E + L AL + + ++GD ++ +++ C+
Sbjct: 48 YLVELLGASLSRPTQRSRAIS--P-ETQILAALGFYTSGSFQTRMGDAIGISQASMSRCV 104
Query: 68 DSFLTAMSQPQIQCQYIKWPTEEESV-IIERNFRALAKFPGVIGAIDGCHIEGKFSKDIR 126
+ A+ + Q+I +P +E SV ++ F LA PGVIG +D H+ K
Sbjct: 105 ANVTEALVERA--SQFIHFPADEASVQALKDEFYGLAGIPGVIGVVDCMHVAIKAPNAED 162
Query: 127 NDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLY 186
Y NRK S+ VC L + G D VL S + + +A G ++
Sbjct: 163 LSYVNRKGLHSLNCLMVCDIRGALMTVETSWPGSLQDCVVLQQSSLSSQFEA-G----MH 217
Query: 187 RDEYHLLGDSAYPLRTWCMVPYKNFGHMTEE--EKKYNTALSKTRVPIENVFGLIKGRWR 244
++ + LLGDS++ LRTW M P H+ E E +YN A S T IE F + R+R
Sbjct: 218 KESW-LLGDSSFFLRTWLMTPL----HIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFR 272
Query: 245 RL---KYIDVGDPKRMAYIISAACVLHNFCYLQD-DVVEEIITHPIE 287
L K P++ ++II A CVLHN DV +T P+E
Sbjct: 273 CLDGSKGALQYSPEKSSHIILACCVLHNISLEHGMDVWSSPVTGPVE 319
>UNIPROTKB|Q96MB7 [details] [associations]
symbol:HARBI1 "Putative nuclease HARBI1" species:9606 "Homo
sapiens" [GO:0004518 "nuclease activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 EMBL:CH471064 GO:GO:0046872 GO:GO:0090305
GO:GO:0004518 CTD:283254 eggNOG:NOG137666 HOGENOM:HOG000231449
HOVERGEN:HBG054543 OMA:GDSSFFL OrthoDB:EOG479F79 InterPro:IPR026103
InterPro:IPR026244 PANTHER:PTHR22930 PRINTS:PR02086 EMBL:AK057237
EMBL:BC036925 IPI:IPI00065459 RefSeq:NP_776172.1 UniGene:Hs.714463
STRING:Q96MB7 DMDM:74732341 PRIDE:Q96MB7 Ensembl:ENST00000326737
GeneID:283254 KEGG:hsa:283254 UCSC:uc001ncy.3 GeneCards:GC11M046672
HGNC:HGNC:26522 HPA:HPA038671 neXtProt:NX_Q96MB7
PharmGKB:PA162390577 InParanoid:Q96MB7 PhylomeDB:Q96MB7
GenomeRNAi:283254 NextBio:93767 ArrayExpress:Q96MB7 Bgee:Q96MB7
CleanEx:HS_HARBI1 Genevestigator:Q96MB7 GermOnline:ENSG00000180423
Uniprot:Q96MB7
Length = 349
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 87/287 (30%), Positives = 134/287 (46%)
Query: 8 FLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCI 67
+LVE L A T R + P E + L AL + + ++GD ++ +++ C+
Sbjct: 48 YLVELLGANLSRPTQRSRAIS--P-ETQVLAALGFYTSGSFQTRMGDAIGISQASMSRCV 104
Query: 68 DSFLTAMSQPQIQCQYIKWPTEEESV-IIERNFRALAKFPGVIGAIDGCHIEGKFSKDIR 126
+ A+ + Q+I++P +E S+ ++ F LA PGV+G +D H+ K
Sbjct: 105 ANVTEALVERA--SQFIRFPADEASIQALKDEFYGLAGMPGVMGVVDCIHVAIKAPNAED 162
Query: 127 NDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLY 186
Y NRK S+ VC L + G D VL S + + +A G ++
Sbjct: 163 LSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVLQQSSLSSQFEA-G----MH 217
Query: 187 RDEYHLLGDSAYPLRTWCMVPYKNFGHMTEE--EKKYNTALSKTRVPIENVFGLIKGRWR 244
+D + LLGDS++ LRTW M P H+ E E +YN A S T IE F + R+R
Sbjct: 218 KDSW-LLGDSSFFLRTWLMTPL----HIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFR 272
Query: 245 RL---KYIDVGDPKRMAYIISAACVLHNFCYLQD-DVVEEIITHPIE 287
L K P++ ++II A CVLHN DV +T P+E
Sbjct: 273 CLDGSKGALQYSPEKSSHIILACCVLHNISLEHGMDVWSSPMTGPME 319
>UNIPROTKB|E2RCW9 [details] [associations]
symbol:HARBI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0005813
CTD:283254 GeneTree:ENSGT00530000063045 OMA:GDSSFFL
InterPro:IPR026103 InterPro:IPR026244 PANTHER:PTHR22930
PRINTS:PR02086 EMBL:AAEX03011498 RefSeq:XP_540753.2
Ensembl:ENSCAFT00000014604 GeneID:483633 KEGG:cfa:483633
NextBio:20858002 Uniprot:E2RCW9
Length = 349
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 88/287 (30%), Positives = 133/287 (46%)
Query: 8 FLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCI 67
+LVE L A T R + P E + L AL + + ++GD ++ +++ C+
Sbjct: 48 YLVELLGASLSRPTQRSRAIS--P-ETQILAALGFYTSGSFQTRMGDAIGISQASMSRCV 104
Query: 68 DSFLTAMSQPQIQCQYIKWPTEEESV-IIERNFRALAKFPGVIGAIDGCHIEGKFSKDIR 126
+ A+ + Q +I++P +E S+ ++ F LA PGVIG +D H+ K
Sbjct: 105 ANVTEALVERATQ--FIRFPADEASMQALKDEFYGLAGMPGVIGVVDCIHVAIKAPNAED 162
Query: 127 NDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLY 186
Y NRK S+ VC L + G D VL S + +A G ++
Sbjct: 163 LSYVNRKGLHSLNCLMVCDIRGALMTVETNWPGSLQDYAVLQQSSLNSHFEA-G----MH 217
Query: 187 RDEYHLLGDSAYPLRTWCMVPYKNFGHMTEE--EKKYNTALSKTRVPIENVFGLIKGRWR 244
+D + LLGDS++ LRTW M P H+ E E +YN A S T IE F + R+R
Sbjct: 218 KDSW-LLGDSSFFLRTWLMTPL----HIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFR 272
Query: 245 RL---KYIDVGDPKRMAYIISAACVLHNFCYLQD-DVVEEIITHPIE 287
L K P++ ++II A CVLHN DV +T P+E
Sbjct: 273 CLDGSKGALQYSPEKSSHIILACCVLHNISLEHGMDVWSSPMTGPME 319
>UNIPROTKB|F1SIA2 [details] [associations]
symbol:HARBI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0005813 CTD:283254
GeneTree:ENSGT00530000063045 OMA:GDSSFFL InterPro:IPR026103
InterPro:IPR026244 PANTHER:PTHR22930 PRINTS:PR02086 EMBL:CU467600
RefSeq:XP_003122875.1 UniGene:Ssc.5597 Ensembl:ENSSSCT00000014482
GeneID:100516314 KEGG:ssc:100516314 Uniprot:F1SIA2
Length = 349
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 86/287 (29%), Positives = 134/287 (46%)
Query: 8 FLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCI 67
+LVE L + T R + P E + L AL + + ++GD ++ +++ C+
Sbjct: 48 YLVELLGSSLSRPTQRSRAIS--P-ETQILAALGFYTSGSFQTRMGDAIGISQASMSRCV 104
Query: 68 DSFLTAMSQPQIQCQYIKWPTEEESV-IIERNFRALAKFPGVIGAIDGCHIEGKFSKDIR 126
+ A+ + Q+I++P +E SV ++ F LA PGVIG +D H+ K
Sbjct: 105 TNVTEALVERA--SQFIRFPADEASVQALKDEFYGLAGMPGVIGVVDCIHVAIKAPNAED 162
Query: 127 NDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLY 186
Y NRK S+ VC L + G D VL S + + +A G ++
Sbjct: 163 LSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCVVLQQSSLSSQFEA-G----MH 217
Query: 187 RDEYHLLGDSAYPLRTWCMVPYKNFGHMTEE--EKKYNTALSKTRVPIENVFGLIKGRWR 244
++ + LLGDS++ LR+W M P H+ E E +YN A S T IE F + R+R
Sbjct: 218 KESW-LLGDSSFFLRSWLMTPL----HIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFR 272
Query: 245 RL---KYIDVGDPKRMAYIISAACVLHNFCYLQD-DVVEEIITHPIE 287
L K P++ ++II A CVLHN DV +T P+E
Sbjct: 273 CLDGSKGALQYSPEKCSHIILACCVLHNISLEHGMDVWSSPVTGPME 319
>TAIR|locus:2123874 [details] [associations]
symbol:AT4G29780 "AT4G29780" species:3702 "Arabidopsis
thaliana" [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR026103 PANTHER:PTHR22930
EMBL:BT002922 EMBL:BT005724 IPI:IPI00544260 RefSeq:NP_567834.2
UniGene:At.3318 STRING:Q84J48 EnsemblPlants:AT4G29780.1
GeneID:829100 KEGG:ath:AT4G29780 TAIR:At4g29780 eggNOG:NOG330321
HOGENOM:HOG000241246 InParanoid:Q84J48 OMA:RDHISHN PhylomeDB:Q84J48
ProtClustDB:CLSN2686810 Genevestigator:Q84J48 Uniprot:Q84J48
Length = 540
Score = 265 (98.3 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 74/292 (25%), Positives = 144/292 (49%)
Query: 1 MRKTTFGFLVEAL-AAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLA 59
M K+TF + E L + T+ +P P K+ V + +AT +R + ++F L
Sbjct: 219 MSKSTFNLICEELDTTVTKKNTMLRDAIP-AP--KRVGVCVWRLATGAPLRHVSERFGLG 275
Query: 60 DSTVWSCIDSFLTAMSQPQIQCQYIKWPTEEESVIIERNFRALAKFPGVIGAI------- 112
ST + A+ + +Y+ WP++ E + F ++ K P V+G+I
Sbjct: 276 ISTCHKLVIEVCRAIYDV-LMPKYLLWPSDSEINSTKAKFESVHKIPNVVGSIYTTHIPI 334
Query: 113 --DGCHIEGKFSKDIRNDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTS 170
H+ F+K R+ N+K + S+ +QGV ++ + T++ +G G D ++L S
Sbjct: 335 IAPKVHVAAYFNK--RHTERNQKTSYSITVQGVVNADGIFTDVCIGNPGSLTDDQILEKS 392
Query: 171 QIGRRIDAYGPTSLLYRDEYHLLGDSAYPLRTWCMVPYKNFGHMTEEEKKYNTALSKTRV 230
+ R+ A G + RD + ++G+S +PL + +VPY ++T + +N ++ + +
Sbjct: 393 SLSRQRAARG----MLRDSW-IVGNSGFPLTDYLLVPYTR-QNLTWTQHAFNESIGEIQG 446
Query: 231 PIENVFGLIKGRWRRLKYIDVGDPKRMAYIISAACVLHNFCYLQ-DDVVEEI 281
F +KGRW L+ + + Y++ A CVLHN C ++ ++++ E+
Sbjct: 447 IATAAFERLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPEL 498
>UNIPROTKB|E1BQ99 [details] [associations]
symbol:HARBI1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] GO:GO:0005737 GO:GO:0005813 CTD:283254
GeneTree:ENSGT00530000063045 OMA:GDSSFFL InterPro:IPR026103
InterPro:IPR026244 PANTHER:PTHR22930 PRINTS:PR02086
EMBL:AADN02033491 IPI:IPI00598024 RefSeq:XP_421117.1
Ensembl:ENSGALT00000013605 GeneID:423193 KEGG:gga:423193
NextBio:20825695 Uniprot:E1BQ99
Length = 348
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 82/268 (30%), Positives = 129/268 (48%)
Query: 8 FLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCI 67
+LV+ L A T R + P E + L AL + + ++GD ++ +++ C+
Sbjct: 48 YLVDLLGASLSRPTQRSRAIS--P-ETQVLAALGFYTSGSFQTRMGDAIGISQASMSRCV 104
Query: 68 DSFLTAMSQPQIQCQYIKWPTEEESV-IIERNFRALAKFPGVIGAIDGCHIEGKFSKDIR 126
+ A+ + Q +I +P +E +V ++ +F ALA PGV+G +D H+ K
Sbjct: 105 ANVTEALVERAPQ--FIHFPEDEAAVQSLKDDFYALAGMPGVLGVVDCTHVAIKAPNAED 162
Query: 127 NDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLY 186
Y NRK S+ VC + L + G D VL + + + + + LY
Sbjct: 163 LSYVNRKGLHSLNCLMVCDARGALLSAETHWPGSMPDCNVLQQAALTSQFE-----NELY 217
Query: 187 RDEYHLLGDSAYPLRTWCMVPYKNFGHMTEE--EKKYNTALSKTRVPIENVFGLIKGRWR 244
+D + LLGDS++ LRTW M P H+ E E +YN A S T IE F I+ R+R
Sbjct: 218 KDGW-LLGDSSFFLRTWLMTPL----HIPETPAEYRYNMAHSATHNVIERTFRTIRSRFR 272
Query: 245 RL---KYIDVGDPKRMAYIISAACVLHN 269
L K P++ ++II A CVLHN
Sbjct: 273 CLDGSKGTLQYSPEKSSHIILACCVLHN 300
>TAIR|locus:2143104 [details] [associations]
symbol:AT5G12010 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0015824 "proline transport" evidence=RCA]
GO:GO:0005886 GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 EMBL:AL163812 InterPro:IPR026103 PANTHER:PTHR22930
eggNOG:NOG243843 HOGENOM:HOG000241246 ProtClustDB:CLSN2686810
EMBL:AY058074 EMBL:BT002297 IPI:IPI00541096 PIR:T48560
RefSeq:NP_196762.1 UniGene:At.5105 IntAct:Q9LYH2 PRIDE:Q9LYH2
EnsemblPlants:AT5G12010.1 GeneID:831074 KEGG:ath:AT5G12010
TAIR:At5g12010 InParanoid:Q9LYH2 OMA:YLIANSA PhylomeDB:Q9LYH2
Genevestigator:Q9LYH2 Uniprot:Q9LYH2
Length = 502
Score = 257 (95.5 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 75/298 (25%), Positives = 143/298 (47%)
Query: 1 MRKTTFGFLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLAD 60
M K+TF + + L + E R +PV ++ V + +AT +R + +F L
Sbjct: 181 MSKSTFELICDELNSAVAKEDTALRNA--IPVRQRVAVCIWRLATGEPLRLVSKKFGLGI 238
Query: 61 STVWSCIDSFLTAMSQPQIQCQYIKWPTEEESVIIERNFRALAKFPGVIGAIDGCHIE-- 118
ST + A+ + +Y++WP +E I F +++ P V+G++ HI
Sbjct: 239 STCHKLVLEVCKAIKDV-LMPKYLQWPDDESLRNIRERFESVSGIPNVVGSMYTTHIPII 297
Query: 119 -GKFSK----DIRNDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIG 173
K S + R+ N+K + S+ +Q V + T++ +G G D KVL S +
Sbjct: 298 APKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPGSMPDDKVLEKSLLY 357
Query: 174 RRIDAYGPTSLLYRDEYHLLGDSAYPLRTWCMVPYKNFGHMTEEEKKYNTALSKTRVPIE 233
+R + G L + + + G +PL W +VPY ++T + +N +S+ + +
Sbjct: 358 QRANNGG----LLKGMW-VAGGPGHPLLDWVLVPYTQ-QNLTWTQHAFNEKMSEVQGVAK 411
Query: 234 NVFGLIKGRWRRLKYIDVGDPKRMAYIISAACVLHNFCYLQDDVVE-EIITHPIENQM 290
FG +KGRW L+ + + ++ A CVLHN C ++++ +E E++ I++++
Sbjct: 412 EAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMREEKMEPELMVEVIDDEV 469
>RGD|1584007 [details] [associations]
symbol:Harbi1 "harbinger transposase derived 1" species:10116
"Rattus norvegicus" [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0046872 "metal ion binding" evidence=IEA] RGD:1584007
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0046872
GO:GO:0090305 GO:GO:0004518 CTD:283254 eggNOG:NOG137666
GeneTree:ENSGT00530000063045 HOGENOM:HOG000231449
HOVERGEN:HBG054543 OrthoDB:EOG479F79 InterPro:IPR026103
InterPro:IPR026244 PANTHER:PTHR22930 PRINTS:PR02086 EMBL:BC158734
IPI:IPI00394536 RefSeq:NP_001107265.2 UniGene:Rn.198635
Ensembl:ENSRNOT00000065462 GeneID:690164 KEGG:rno:690164
UCSC:RGD:1584007 NextBio:740317 ArrayExpress:B0BN95
Genevestigator:B0BN95 Uniprot:B0BN95
Length = 349
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 85/287 (29%), Positives = 129/287 (44%)
Query: 8 FLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCI 67
+LVE L A T R + P E + L AL + + ++GD ++ +++ C+
Sbjct: 48 YLVELLGASLSRPTQRSRAIS--P-ETQILAALGFYTSGSFQTRMGDAIGISQASMSRCV 104
Query: 68 DSFLTAMSQPQIQCQYIKWPTEEESV-IIERNFRALAKFPGVIGAIDGCHIEGKFSKDIR 126
+ A+ + Q+I +P +E ++ ++ F LA PGVIGA+D H+ K
Sbjct: 105 ANVTEALVERA--SQFIHFPADEAAIQSLKDEFYGLAGMPGVIGAVDCIHVAIKAPNAED 162
Query: 127 NDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLY 186
Y NRK S+ VC L + G D VL S + + + P
Sbjct: 163 LSYVNRKGLHSLNCLVVCDIRGALMTVETSWPGSLQDCAVLQQSSLSSQFETGMP----- 217
Query: 187 RDEYHLLGDSAYPLRTWCMVPYKNFGHMTEE--EKKYNTALSKTRVPIENVFGLIKGRWR 244
+D + LLGDS++ L TW + P H+ E E +YN A S T IE + R+R
Sbjct: 218 KDSW-LLGDSSFFLHTWLLTPL----HIPETPAEYRYNRAHSATHSVIEKTLRTLCCRFR 272
Query: 245 RL---KYIDVGDPKRMAYIISAACVLHNFCYLQD-DVVEEIITHPIE 287
L K P++ ++II A CVLHN DV +T PIE
Sbjct: 273 CLDGSKGALQYSPEKSSHIILACCVLHNISLEHGMDVWSSPVTGPIE 319
>ZFIN|ZDB-GENE-081022-77 [details] [associations]
symbol:zgc:194221 "zgc:194221" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-081022-77 GeneTree:ENSGT00530000063045
InterPro:IPR026103 PANTHER:PTHR22930 EMBL:BX324210 EMBL:BC162733
EMBL:BC162738 IPI:IPI00774426 RefSeq:NP_001129460.1
UniGene:Dr.134637 Ensembl:ENSDART00000082245 GeneID:100191015
KEGG:dre:100191015 eggNOG:NOG248361 HOGENOM:HOG000007556
HOVERGEN:HBG079725 OMA:DGRFQRY OrthoDB:EOG42JNTD NextBio:20795590
Uniprot:B3DHE2
Length = 394
Score = 241 (89.9 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 78/263 (29%), Positives = 124/263 (47%)
Query: 20 ETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQI 79
+T Y + + P E+ + L ++AT S R I + + STV + + A+
Sbjct: 79 DTNYRQSIE--PAERLA-ICLRFLATGDSYRTIAFSYRVGVSTVAGIVAAVTRAIWDTLA 135
Query: 80 QCQYIKWPTEEESVIIERNFRALAKFPGVIGAIDGCHIEGKFSKDIRNDYNNRKCTQSMI 139
Q + + PT E+ I +F FP +G+IDG H+ K + + + N K T S++
Sbjct: 136 Q-EVMPVPTTEDWRNISTDFLHRWNFPNCLGSIDGKHVVIKAPDNSGSLFYNYKGTYSVV 194
Query: 140 LQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGR--RIDAYG-PTSLLYRDEYHL---- 192
L V S + VG GR D VL+ S G+ R A G P L H
Sbjct: 195 LLAVVDSQYRFRVVDVGSYGRMSDGGVLANSIFGQALRDGALGLPQDALLSGAEHFGPQP 254
Query: 193 ---LGDSAYPLRTWCMVPYKNFGH-MTEEEKKYNTALSKTRVPIENVFGLIKGRWRRLK- 247
+ D A+PLR M P+ GH ++ ++ +N LS+ R+ +EN FG++ +WR +
Sbjct: 255 HVFVADEAFPLRRDLMRPFP--GHNLSGRQRIFNYRLSRARLIVENTFGILTAQWRMYRG 312
Query: 248 YIDVGDPKRMAYIISAACVLHNF 270
I++ P + + A CVLHNF
Sbjct: 313 AIEIS-PANVDACVKATCVLHNF 334
>MGI|MGI:2443194 [details] [associations]
symbol:Harbi1 "harbinger transposase derived 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2443194 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0090305
EMBL:AL714023 GO:GO:0004518 CTD:283254 eggNOG:NOG137666
GeneTree:ENSGT00530000063045 HOGENOM:HOG000231449
HOVERGEN:HBG054543 OMA:GDSSFFL OrthoDB:EOG479F79 InterPro:IPR026103
InterPro:IPR026244 PANTHER:PTHR22930 PRINTS:PR02086 EMBL:AK041747
EMBL:AK045343 EMBL:AK080671 EMBL:AK084226 EMBL:AK147045
EMBL:BC094315 IPI:IPI00453562 IPI:IPI00473454 IPI:IPI00816924
RefSeq:NP_848839.2 UniGene:Mm.130331 STRING:Q8BR93 PRIDE:Q8BR93
Ensembl:ENSMUST00000090608 Ensembl:ENSMUST00000111322
Ensembl:ENSMUST00000142692 GeneID:241547 KEGG:mmu:241547
UCSC:uc008kwo.1 InParanoid:Q8BR93 ChiTaRS:HARBI1 NextBio:385049
Bgee:Q8BR93 Genevestigator:Q8BR93 GermOnline:ENSMUSG00000027243
Uniprot:Q8BR93
Length = 349
Score = 229 (85.7 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 83/285 (29%), Positives = 125/285 (43%)
Query: 8 FLVEALAAINGYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCI 67
FLVE L A T R + P E + L AL + + ++GD ++ +++ C+
Sbjct: 48 FLVELLGASLSRPTQRSRAIS--P-ETQILAALGFYTSGSFQTRMGDAIGISQASMSRCV 104
Query: 68 DSFLTAMSQPQIQCQYIKWPTEEESV-IIERNFRALAKFPGVIGAIDGCHIEGKFSKDIR 126
+ A+ + Q+I +P +E +V ++ F LA PGVIG D H+ K
Sbjct: 105 ANVTEALVERA--SQFIHFPVDEAAVQSLKDEFYGLAGMPGVIGVADCIHVAIKAPNAED 162
Query: 127 NDYNNRKCTQSMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLY 186
Y NRK S+ VC L + G D VL S + + + P
Sbjct: 163 LSYVNRKGLHSLNCLVVCDIRGALMTVETSWPGSLQDCAVLQRSSLTSQFETGMP----- 217
Query: 187 RDEYHLLGDSAYPLRTWCMVPYKNFGHMTEEEKKYNTALSKTRVPIENVFGLIKGRWRRL 246
+D + LLGDS++ LR+W + P T E +YN A S T IE + R+R L
Sbjct: 218 KDSW-LLGDSSFFLRSWLLTPLPI--PETAAEYRYNRAHSATHSVIERTLQTLCCRFRCL 274
Query: 247 ---KYIDVGDPKRMAYIISAACVLHNFCYLQD-DVVEEIITHPIE 287
K P++ ++II A CVLHN DV + PI+
Sbjct: 275 DGSKGALQYSPEKCSHIILACCVLHNISLDHGMDVWSSPVPGPID 319
>TAIR|locus:2094088 [details] [associations]
symbol:AT3G19120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016788 "hydrolase
activity, acting on ester bonds" evidence=IEA] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
EMBL:CP002686 EMBL:AP000419 InterPro:IPR026103 PANTHER:PTHR22930
EMBL:AY070731 EMBL:AY149933 IPI:IPI00533950 RefSeq:NP_566626.1
UniGene:At.28342 IntAct:Q9LJL8 PRIDE:Q9LJL8
EnsemblPlants:AT3G19120.1 GeneID:821446 KEGG:ath:AT3G19120
TAIR:At3g19120 HOGENOM:HOG000090855 InParanoid:Q9LJL8 OMA:YLISKIT
PhylomeDB:Q9LJL8 ProtClustDB:CLSN2688554 Genevestigator:Q9LJL8
Uniprot:Q9LJL8
Length = 446
Score = 223 (83.6 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 68/267 (25%), Positives = 122/267 (45%)
Query: 30 VPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQIQCQYIKWPTE 89
+P + + LS +A S + + +++L D + S I + +T + ++ ++IK P
Sbjct: 146 LPADYAVAMVLSRLAHGCSAKTLASRYSL-DPYLISKITNMVTRLLATKLYPEFIKIPVG 204
Query: 90 EESVI-IERNFRALAKFPGVIGAIDGCHIEGKFSKDI--RNDYNNRKCTQSMILQGVCTS 146
+ +I + F L P + GAID ++ + + RN Y + +++LQ V
Sbjct: 205 KRRLIETTQGFEELTSLPNICGAIDSTPVKLRRRTKLNPRNIYGCKYGYDAVLLQVVADH 264
Query: 147 NKLLTNIHVGCTGRNHDAKVLSTSQIGRRI---DAYGPTSLLYRDEY---HLLGDSAYPL 200
K+ ++ V G D+ S + +R+ D + R + +++GD YPL
Sbjct: 265 KKIFWDVCVKAPGGEDDSSHFRDSLLYKRLTSGDIVWEKVINIRGHHVRPYIVGDWCYPL 324
Query: 201 RTWCMVPYKNFGHMTEEEKKYNTALSKTRVPIENVFGLIKGRWRRLKYIDVGDPKRMAYI 260
++ M P+ G T E ++ L K R + GL+K RW+ L+ ++VG
Sbjct: 325 LSFLMTPFSPNGSGTPPENLFDGMLMKGRSVVVEAIGLLKARWKILQSLNVG-VNHAPQT 383
Query: 261 ISAACVLHNFCYLQDDVVEEIITHPIE 287
I A CVLHN C + + EI P E
Sbjct: 384 IVACCVLHNLCQIAREPEPEIWKDPDE 410
>TAIR|locus:2077259 [details] [associations]
symbol:AT3G63270 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016788 "hydrolase
activity, acting on ester bonds" evidence=IEA] EMBL:CP002686
GenomeReviews:BA000014_GR InterPro:IPR026103 PANTHER:PTHR22930
EMBL:AF370300 EMBL:AY063087 IPI:IPI00539136 RefSeq:NP_567144.1
UniGene:At.1305 PRIDE:Q94K49 EnsemblPlants:AT3G63270.1
GeneID:825502 KEGG:ath:AT3G63270 TAIR:At3g63270 eggNOG:NOG298020
HOGENOM:HOG000070719 InParanoid:Q94K49 OMA:SGLINIE PhylomeDB:Q94K49
ProtClustDB:CLSN2685285 ArrayExpress:Q94K49 Genevestigator:Q94K49
Uniprot:Q94K49
Length = 396
Score = 208 (78.3 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 71/261 (27%), Positives = 117/261 (44%)
Query: 32 VEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQIQCQYIKWPTEEE 91
VEK+ +AL +A+ S +G F + STV F+ A+ + +++WP +
Sbjct: 105 VEKQVAIALRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIEALEERAKH--HLRWPDSDR 162
Query: 92 SVIIERNFRALAKFPGVIGAIDGCHIEGKF-SKDIRNDYNNRKCTQSMILQGVCTSNKLL 150
I+ F + P GAID HI + +D+ +++ SM LQGV
Sbjct: 163 IEEIKSKFEEMYGLPNCCGAIDTTHIIMTLPAVQASDDWCDQEKNYSMFLQGVFDHEMRF 222
Query: 151 TNIHVGCTGRNHDAKVLSTS------QIGRRIDAYGPTSLLYRDEY--HLLGDSAYPLRT 202
N+ G G +K+L S + + +D P +L + +++G +YPL
Sbjct: 223 LNMVTGWPGGMTVSKLLKFSGFFKLCENAQILDG-NPKTLSQGAQIREYVVGGISYPLLP 281
Query: 203 WCMVPYKNFGHMTEEEKKYNTALSKTRVPIENVFGLIKGRWRRL-KYIDVGDPKRMAYII 261
W + P+ + H ++ +N K R F +KG WR L K + D +++ II
Sbjct: 282 WLITPHDS-DHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSKVMWRPDRRKLPSII 340
Query: 262 SAACVLHNF---C--YLQDDV 277
C+LHN C YLQ+DV
Sbjct: 341 LVCCLLHNIIIDCGDYLQEDV 361
>ZFIN|ZDB-GENE-040608-1 [details] [associations]
symbol:harbi1 "harbinger transposase derived 1"
species:7955 "Danio rerio" [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
ZFIN:ZDB-GENE-040608-1 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0090305 GO:GO:0004518 CTD:283254 eggNOG:NOG137666
GeneTree:ENSGT00530000063045 HOGENOM:HOG000231449
HOVERGEN:HBG054543 OMA:GDSSFFL OrthoDB:EOG479F79 InterPro:IPR026103
InterPro:IPR026244 PANTHER:PTHR22930 PRINTS:PR02086 EMBL:BC078390
EMBL:BC100116 IPI:IPI00482479 RefSeq:NP_001003734.1
UniGene:Dr.85217 STRING:Q6AZB8 Ensembl:ENSDART00000052323
Ensembl:ENSDART00000129462 GeneID:445279 KEGG:dre:445279
InParanoid:Q6AZB8 NextBio:20832025 Bgee:Q6AZB8 Uniprot:Q6AZB8
Length = 349
Score = 204 (76.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 63/238 (26%), Positives = 108/238 (45%)
Query: 37 LVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQIQCQYIKWPTEEESVI-I 95
L AL + + K+GD ++ +++ C+ + A+ + + +I + +E +
Sbjct: 74 LAALGFYTSGSFQSKMGDAIGISQASMSRCVSNVTKALIEKAPE--FIGFTRDEATKQQF 131
Query: 96 ERNFRALAKFPGVIGAIDGCHIEGKFSKDIRNDYNNRKCTQSMILQGVCTSNKLLTNIHV 155
+ F +A P V G +D HI K + Y N+K S+ Q VC + LL +
Sbjct: 132 KDEFYRIAGIPNVTGVVDCAHIAIKAPNADDSSYVNKKGFHSINCQLVCDARGLLLSAET 191
Query: 156 GCTGRNHDAKVLSTSQIGRRIDAYGPTSLLYRDEYHLLGDSAYPLRTWCMVPYKNFGHMT 215
G D V S + + + DE LLGD+ YPL+ W M P ++ +
Sbjct: 192 HWPGSLTDRAVFKQSNVAKLFEEQEND-----DEGWLLGDNRYPLKKWLMTPVQS--PES 244
Query: 216 EEEKKYNTALSKTRVPIENVFGLIKGRWRRLK----YIDVGDPKRMAYIISAACVLHN 269
+ +YN A + T ++ F I+ R+R L Y+ P++ ++II A CVLHN
Sbjct: 245 PADYRYNLAHTTTHEIVDRTFRAIQTRFRCLDGAKGYLQYS-PEKCSHIIQACCVLHN 301
>TAIR|locus:2099901 [details] [associations]
symbol:AT3G55350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016788 "hydrolase
activity, acting on ester bonds" evidence=IEA] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132975 InterPro:IPR026103
PANTHER:PTHR22930 HOGENOM:HOG000070719 ProtClustDB:CLSN2685285
EMBL:AY087712 EMBL:BT009674 EMBL:AK117365 IPI:IPI00516908
PIR:T47674 RefSeq:NP_191095.1 UniGene:At.35030 PRIDE:Q9M2U3
DNASU:824701 EnsemblPlants:AT3G55350.1 GeneID:824701
KEGG:ath:AT3G55350 TAIR:At3g55350 eggNOG:NOG241715
InParanoid:Q9M2U3 OMA:TTHITMC PhylomeDB:Q9M2U3
Genevestigator:Q9M2U3 Uniprot:Q9M2U3
Length = 406
Score = 188 (71.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 69/276 (25%), Positives = 124/276 (44%)
Query: 26 GVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQIQCQYIK 85
G P + + + VAL + + S+ IG+ F + STV F+ +M + I ++
Sbjct: 106 GNP-LSLNDRVAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERAIH--HLS 162
Query: 86 WPTEEESVIIERNFRALAKFPGVIGAIDGCHIEGKF-SKDIRND-YNNRKCTQSMILQGV 143
WP++ + I+ F ++ P GAID HI + + N + + + SM LQ V
Sbjct: 163 WPSKLDE--IKSKFEKISGLPNCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAV 220
Query: 144 CTSNKLLTNIHVGCTGRNHDAKVLSTS------QIGRRIDAYG-PTSLLYRDEYHLLGDS 196
+ ++ G G +D VL S + G+R++ P S +++GDS
Sbjct: 221 VDPDMRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDS 280
Query: 197 AYPLRTWCMVPYKNFGHMTE-EEKKYNTALSKTRVPIENVFGLIKGRWRRLKYID-VGDP 254
+PL W + PY+ G T + ++N S+ + +K RWR + + + D
Sbjct: 281 GFPLLPWLLTPYQ--GKPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDR 338
Query: 255 KRMAYIISAACVLHNFCY-LQDDVVEEIITHPIENQ 289
R+ II C+LHN ++D +++ P+ Q
Sbjct: 339 NRLPRIIFVCCLLHNIIIDMEDQTLDD---QPLSQQ 371
>TAIR|locus:504956234 [details] [associations]
symbol:AT1G43722 "AT1G43722" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR026103 PANTHER:PTHR22930
IPI:IPI00546258 RefSeq:NP_683376.1 UniGene:At.52016
EnsemblPlants:AT1G43722.1 GeneID:840961 KEGG:ath:AT1G43722
OMA:LNIMAIC Uniprot:F4ICS6
Length = 324
Score = 170 (64.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 55/185 (29%), Positives = 85/185 (45%)
Query: 30 VPVEKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQIQCQYIKWPTE 89
+ +E+ + L R +G +F TV LTA + C YI+ PT
Sbjct: 96 ISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATEL--LACDYIRTPTR 153
Query: 90 EESVII-ER---NFRALAKFPGVIGAIDGCHIEGKFSKDIRNDYNNRKCTQSMILQGVCT 145
+E I ER + R F G +GA+DG H+ K D++ Y NR S+ + +C
Sbjct: 154 QELYRIPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICD 213
Query: 146 SNKLLTNIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLYRDEYHLLGDSAYPLRTWCM 205
L T I G G +D VL QI ++ D+ P L ++Y+L+ DS YP + +
Sbjct: 214 LKMLFTYIWNGAPGSCYDTAVL---QIAQQSDSEFP--LPPSEKYYLV-DSGYPNKQGLL 267
Query: 206 VPYKN 210
PY++
Sbjct: 268 APYRS 272
>ZFIN|ZDB-GENE-020415-1 [details] [associations]
symbol:tceb2 "transcription elongation factor B
(SIII), polypeptide 2 (18kD, elongin B)" species:7955 "Danio rerio"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] ZFIN:ZDB-GENE-020415-1
InterPro:IPR026103 PANTHER:PTHR22930 EMBL:BX004999 IPI:IPI00810253
RefSeq:XP_001924016.1 RefSeq:XP_709669.1 UniGene:Dr.71798
Ensembl:ENSDART00000140998 GeneID:569097 KEGG:dre:569097
GeneTree:ENSGT00510000052535 NextBio:20889509 ArrayExpress:E9QD98
Bgee:E9QD98 Uniprot:E9QD98
Length = 420
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 62/298 (20%), Positives = 123/298 (41%)
Query: 5 TFGFLVEALAAIN-GYETLYERGVPFVPVEKKTLVALSYMATQLSMRKIGDQFNLADSTV 63
T ++ L + N GY G + + L++L+ ++ ++S R + F+L +
Sbjct: 98 TVQYVTNFLQSSNMGYSKNRMSGRARLSMSHTVLLSLTLLSKRVSYRSVSSSFHLEKGNI 157
Query: 64 WSCIDSFLTAMSQPQIQCQYIKWPTEEESV---IIERNFRALAK------FPGVIGAIDG 114
SF + Q + I+WPT +E++ + ++ + ++ P V+G +
Sbjct: 158 HRIFFSFCDQVIAQQNRI--IQWPTGQEAIQNLLPFSSWHSRSEGLEERGLPRVLGVLGD 215
Query: 115 CHIEGKFSK---DIRNDYNNRKCTQSMI-------LQGVCTSNKLLTNIHVGCTGRNHDA 164
I + D D + K +S + L+ VC + H+ +
Sbjct: 216 TRIPIRLPSGKPDSETDAPDAKKLKSEVHPDSWLNLELVCNGDGRFIYCHISKGSESDRG 275
Query: 165 KVLSTSQIGRRIDAYGPTSLLYRDEYHLLGDSAYPLRTWCMVPYKNFGHMTEEEKKYNTA 224
K L T ++ + + P + L + +PL + P+ G + +E YN A
Sbjct: 276 KAL-TERLQKHPEMLPPGACL-------IAGVGHPLTEQILTPFST-GR-SPQENLYNRA 325
Query: 225 LSKTRVPIENVFGLIKGRWRRLKYIDVGDPKRMAYIISAACVLHNFCYLQDDVVEEII 282
L +K R+++L+Y+D+G+ +R ++ ACVLHN DV + +I
Sbjct: 326 LGNHLGRFNQAVADLKERFQKLRYLDMGNFERAKTVVLTACVLHNVFLDMGDVTKGLI 383
>ZFIN|ZDB-GENE-060810-147 [details] [associations]
symbol:si:dkey-197c15.6 "si:dkey-197c15.6"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060810-147 GeneTree:ENSGT00530000063045
InterPro:IPR026103 InterPro:IPR026244 PANTHER:PTHR22930
PRINTS:PR02086 EMBL:CR376854 IPI:IPI00901436 RefSeq:XP_697483.2
UniGene:Dr.133515 Ensembl:ENSDART00000112777 GeneID:569030
KEGG:dre:569030 NextBio:20889464 Bgee:E7FFX8 Uniprot:E7FFX8
Length = 395
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 51/239 (21%), Positives = 101/239 (42%)
Query: 33 EKKTLVALSYMATQLSMRKIGDQFNLADSTVWSCIDSFLTAMSQPQIQCQYIKWPTE-EE 91
E L AL+Y A K+ D+ + T + + +S + ++I +P +
Sbjct: 98 EANILAALAYYAQGSLPNKVTDRLRIDQKTACEAVKATTKLLSD--LTPEFITFPNSYND 155
Query: 92 SVIIERNFRALAKFPGVIGAIDGCHIEGKFSKDIRNDYNNRKCTQSMILQGVCTSNKLLT 151
+ + F+ L+ P V+G + HI + Y N S+++Q + ++ L
Sbjct: 156 RMGAAQAFKNLSGIPHVVGVLGYLHIRVRPPVLEERMYVNTLGYHSIMVQVIFDADGNLF 215
Query: 152 NIHVGCTGRNHDAKVLSTSQIGRRIDAYGPTSLLYRDEYHLLGDSAYPLRTWCMVPYKNF 211
++ C G + V S IGR+ S+ ++G + + P +
Sbjct: 216 SVEQCCPGGTPEHSVWENSDIGRQF------SIFQHGHTWIIGSPSLLGCGHVLTPVETI 269
Query: 212 GHMTEEEKKYNTALSKTRVPIENVFGLIKGRWRRLK-YIDVGDPKRMAYIISAACVLHN 269
+ ++N A + ++VFG +K R++ L+ + + P+ +A +I A CVLHN
Sbjct: 270 RIKSNAAVQFNKAHALLYNSSQHVFGSLKSRFQCLQDFGSIQSPESVACMIRACCVLHN 328
>TAIR|locus:2207051 [details] [associations]
symbol:AT1G72270 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007059 "chromosome segregation" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0032504 "multicellular organism
reproduction" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] EMBL:CP002684 GO:GO:0005739
KO:K14861 UniGene:At.21413 InterPro:IPR021714 Pfam:PF11707
IPI:IPI00524456 RefSeq:NP_565039.4 PRIDE:F4IBR2
EnsemblPlants:AT1G72270.1 GeneID:843559 KEGG:ath:AT1G72270
OMA:ESSPEMG ArrayExpress:F4IBR2 Uniprot:F4IBR2
Length = 2845
Score = 122 (48.0 bits), Expect = 0.00099, P = 0.00099
Identities = 40/156 (25%), Positives = 66/156 (42%)
Query: 137 SMILQGVCTSNKLLTNIHVGCTGRNHDAKVLSTSQ---IGRRIDAYGPTSL---LYRDEY 190
S+++Q + SN +I G + ++ I + + PT L + Y
Sbjct: 206 SILVQALVDSNGRFVDISAGWPSTMKPEAIFRQTKLFSIAEEVLSGAPTKLGNGVLVPRY 265
Query: 191 HLLGDSAYPLRTWCMVPYKNFGHMTEEEKKYNTALSKTRVPIENVFGLIKGRWRRL-KYI 249
+LGDS PL W + PY +++N + +E F ++ RWR L K
Sbjct: 266 -ILGDSCLPLLPWLVTPYDLTSDEESFREEFNNVVHTGLHSVEIAFAKVRARWRILDKKW 324
Query: 250 DVGDPKRMAYIISAACVLHNFCYLQ---DDVVEEII 282
+ M ++I+ C+LHNF DD VEE +
Sbjct: 325 KPETIEFMPFVITTGCLLHNFLVNSGDDDDSVEECV 360
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 307 307 0.0010 115 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 614 (65 KB)
Total size of DFA: 231 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 22.23u 0.09s 22.32t Elapsed: 00:00:03
Total cpu time: 22.23u 0.09s 22.32t Elapsed: 00:00:04
Start: Thu Aug 15 11:52:56 2013 End: Thu Aug 15 11:53:00 2013