Query psy4302
Match_columns 613
No_of_seqs 250 out of 1788
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 22:05:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4302.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4302hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 2.1E-96 7E-101 823.5 44.8 501 19-599 1-549 (552)
2 3sqr_A Laccase; multicopper ox 100.0 1.3E-94 4.5E-99 804.1 38.7 503 11-597 36-570 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 9.4E-92 3.2E-96 772.3 46.7 452 55-592 15-492 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 9.4E-92 3.2E-96 772.2 45.0 453 54-591 15-491 (495)
5 1zpu_A Iron transport multicop 100.0 1.7E-90 5.7E-95 770.8 45.5 470 20-596 1-508 (534)
6 1v10_A Laccase; multicopper bl 100.0 6.5E-90 2.2E-94 765.0 42.8 457 55-596 35-516 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 2.1E-88 7.3E-93 750.2 42.5 451 55-594 16-493 (503)
8 2q9o_A Laccase-1; multicopper 100.0 9E-88 3.1E-92 753.2 40.7 471 55-600 47-552 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 6.9E-78 2.4E-82 656.0 39.6 391 19-573 14-439 (439)
10 3abg_A Bilirubin oxidase; clea 100.0 4.8E-76 1.7E-80 653.6 44.5 429 21-595 36-498 (534)
11 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.4E-76 4.8E-81 646.8 35.9 377 58-574 34-441 (451)
12 2wsd_A Spore coat protein A; o 100.0 1.5E-75 5.2E-80 648.8 39.8 414 55-574 39-510 (513)
13 3gyr_A PHS, phenoxazinone synt 100.0 7.7E-75 2.6E-79 659.0 38.9 441 55-578 46-595 (612)
14 3zx1_A Oxidoreductase, putativ 100.0 8.7E-74 3E-78 625.7 42.3 409 17-573 46-480 (481)
15 3aw5_A Multicopper oxidase; be 100.0 1.2E-74 4.1E-79 630.7 30.5 380 65-573 28-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 3.3E-72 1.1E-76 613.0 37.8 424 21-572 17-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.4E-70 1.2E-74 611.4 41.3 455 20-583 31-599 (612)
18 3g5w_A Multicopper oxidase typ 100.0 2.2E-49 7.7E-54 413.0 29.7 259 21-324 2-277 (318)
19 2r7e_A Coagulation factor VIII 100.0 2.3E-51 8E-56 470.5 11.9 218 59-307 63-306 (742)
20 2zwn_A Two-domain type laccase 100.0 4E-48 1.4E-52 407.6 31.3 259 20-323 2-277 (339)
21 2j5w_A Ceruloplasmin, ferroxid 100.0 2.1E-47 7.1E-52 454.6 38.4 278 16-323 16-356 (1065)
22 3kw8_A Laccase, putative coppe 100.0 6E-48 2E-52 394.8 24.9 120 18-165 4-142 (276)
23 3t9w_A Small laccase, multi-co 100.0 1.7E-47 5.9E-52 395.3 22.0 100 61-164 45-163 (299)
24 3tas_A Small laccase, multi-co 100.0 2.3E-46 8E-51 389.7 26.2 105 57-165 24-148 (313)
25 2dv6_A Nitrite reductase; elec 100.0 3.1E-46 1E-50 408.3 22.9 371 62-574 44-433 (447)
26 2j5w_A Ceruloplasmin, ferroxid 100.0 2.9E-47 9.8E-52 453.4 15.9 408 59-575 615-1059(1065)
27 1kbv_A ANIA, major outer membr 100.0 2.5E-44 8.4E-49 376.9 22.9 257 19-323 36-307 (327)
28 3cg8_A Laccase; oxidoreductase 100.0 3.9E-44 1.3E-48 377.0 24.2 95 67-165 70-183 (343)
29 3gdc_A Multicopper oxidase; be 100.0 1.9E-43 6.6E-48 363.6 28.4 230 20-307 33-265 (288)
30 1mzy_A Copper-containing nitri 100.0 7.6E-41 2.6E-45 351.6 26.2 265 16-323 27-318 (333)
31 2zoo_A Probable nitrite reduct 100.0 4.7E-41 1.6E-45 366.7 23.9 260 17-324 24-298 (442)
32 1oe1_A Dissimilatory copper-co 100.0 1.6E-40 5.4E-45 349.7 25.3 263 18-323 29-318 (336)
33 2bw4_A Copper-containing nitri 100.0 1.4E-39 4.8E-44 343.0 23.4 264 18-323 35-324 (340)
34 1sdd_A Coagulation factor V; c 100.0 1E-40 3.6E-45 346.2 9.0 211 62-307 49-277 (306)
35 1sdd_B Coagulation factor V; c 100.0 9.5E-39 3.2E-43 363.9 19.1 216 68-307 63-304 (647)
36 2r7e_B Coagulation factor VIII 100.0 2.3E-38 7.7E-43 363.5 15.5 215 70-307 195-433 (770)
37 2dv6_A Nitrite reductase; elec 100.0 1.5E-35 5.1E-40 323.7 23.2 239 58-323 179-433 (447)
38 2r7e_A Coagulation factor VIII 100.0 6.7E-36 2.3E-40 342.6 5.4 214 68-307 446-688 (742)
39 3gdc_A Multicopper oxidase; be 99.9 1.8E-25 6.2E-30 229.6 15.7 234 208-573 53-287 (288)
40 2zwn_A Two-domain type laccase 99.9 1.3E-24 4.4E-29 228.4 19.7 237 208-574 22-277 (339)
41 3g5w_A Multicopper oxidase typ 99.9 5.3E-24 1.8E-28 221.5 19.1 239 209-575 22-277 (318)
42 1sdd_A Coagulation factor V; c 99.8 1.4E-21 4.9E-26 202.3 0.1 84 453-574 217-300 (306)
43 1sdd_B Coagulation factor V; c 99.8 4.6E-19 1.6E-23 201.7 18.9 88 452-574 240-327 (647)
44 1kbv_A ANIA, major outer membr 99.7 3.9E-17 1.3E-21 170.5 19.4 92 452-574 215-307 (327)
45 2r7e_B Coagulation factor VIII 99.7 5E-19 1.7E-23 203.2 4.5 87 452-573 369-455 (770)
46 2bw4_A Copper-containing nitri 99.7 9.5E-17 3.2E-21 168.6 21.3 91 452-574 232-324 (340)
47 1mzy_A Copper-containing nitri 99.7 1.2E-15 4.1E-20 159.7 21.9 91 452-574 226-318 (333)
48 2uxt_A Protein SUFI, SUFI; oxi 99.6 3.8E-15 1.3E-19 162.1 18.8 215 59-307 179-414 (451)
49 2xu9_A Laccase; oxidoreductase 99.6 1.4E-15 4.8E-20 165.1 14.8 221 59-307 174-417 (439)
50 2zoo_A Probable nitrite reduct 99.6 4E-15 1.4E-19 161.8 16.7 94 452-576 205-299 (442)
51 1oe1_A Dissimilatory copper-co 99.6 7.1E-14 2.4E-18 146.4 22.0 91 451-574 225-318 (336)
52 3cvb_A Plastocyanin; cupredoxi 99.5 1.7E-15 5.8E-20 131.1 3.7 89 69-163 14-105 (105)
53 3kw8_A Laccase, putative coppe 99.5 2.6E-14 8.9E-19 145.5 11.0 99 65-166 157-268 (276)
54 1hfu_A Laccase 1; oxidoreducta 99.5 4.1E-13 1.4E-17 148.1 18.5 234 62-307 165-447 (503)
55 1v10_A Laccase; multicopper bl 99.5 4.4E-13 1.5E-17 148.4 18.1 236 62-307 191-468 (521)
56 3zx1_A Oxidoreductase, putativ 99.4 2.9E-12 1E-16 139.8 20.0 221 59-307 208-458 (481)
57 2cal_A Rusticyanin; iron respi 99.4 2.4E-13 8.1E-18 125.9 8.0 98 60-162 48-154 (154)
58 3t6v_A Laccase; beta barrel, o 99.4 2.3E-11 8E-16 133.4 21.7 236 61-307 167-448 (495)
59 1zpu_A Iron transport multicop 99.4 1.3E-11 4.4E-16 136.9 18.9 238 62-307 167-458 (534)
60 3pxl_A Laccase; 4-copper prote 99.4 1.3E-11 4.6E-16 135.4 18.0 235 61-307 165-448 (499)
61 3aw5_A Multicopper oxidase; be 99.3 1.9E-11 6.5E-16 132.7 17.7 205 59-302 166-418 (448)
62 3od3_A Blue copper oxidase CUE 99.3 7.4E-11 2.5E-15 128.7 21.2 230 59-306 180-462 (488)
63 2q9o_A Laccase-1; multicopper 99.3 7.5E-11 2.6E-15 131.5 21.2 238 62-307 195-498 (559)
64 1aoz_A Ascorbate oxidase; oxid 99.3 7.9E-11 2.7E-15 131.3 20.7 228 75-307 205-502 (552)
65 3cg8_A Laccase; oxidoreductase 99.3 7.2E-12 2.5E-16 131.3 10.3 99 65-166 198-309 (343)
66 1iby_A Nitrosocyanin; RED copp 99.3 3.6E-11 1.2E-15 105.2 12.0 93 56-163 19-112 (112)
67 1fwx_A Nitrous oxide reductase 99.2 4.2E-11 1.4E-15 132.3 11.5 94 58-164 497-593 (595)
68 2g23_A PHS, phenoxazinone synt 99.2 7.2E-10 2.5E-14 124.1 20.2 229 60-307 252-568 (612)
69 2wsd_A Spore coat protein A; o 99.1 6.7E-10 2.3E-14 122.7 18.1 213 60-307 228-487 (513)
70 3abg_A Bilirubin oxidase; clea 99.1 4.6E-10 1.6E-14 124.3 16.0 222 61-307 200-452 (534)
71 3sqr_A Laccase; multicopper ox 99.1 5.1E-09 1.7E-13 116.5 23.1 234 63-307 226-521 (580)
72 2ov0_A Amicyanin; beta-sandwic 99.0 7.5E-10 2.6E-14 95.5 9.9 80 67-162 26-105 (105)
73 2aan_A Auracyanin A; cupredoxi 99.0 5.4E-10 1.8E-14 101.6 7.4 102 451-572 35-138 (139)
74 3cvb_A Plastocyanin; cupredoxi 98.9 2.3E-09 7.8E-14 92.2 8.7 86 450-573 18-104 (105)
75 3tas_A Small laccase, multi-co 98.9 7.8E-09 2.7E-13 106.9 12.3 102 65-168 163-276 (313)
76 3t9w_A Small laccase, multi-co 98.9 6.4E-09 2.2E-13 106.8 11.1 101 65-167 179-291 (299)
77 2gim_A Plastocyanin; beta shee 98.9 3.4E-09 1.2E-13 91.3 7.6 82 73-162 19-105 (106)
78 3gyr_A PHS, phenoxazinone synt 98.8 1.6E-07 5.4E-12 105.9 20.9 230 60-307 252-568 (612)
79 2aan_A Auracyanin A; cupredoxi 98.8 3.3E-08 1.1E-12 89.7 10.8 91 70-162 31-139 (139)
80 4hci_A Cupredoxin 1; structura 98.6 6.1E-08 2.1E-12 82.6 8.2 85 62-162 16-100 (100)
81 2gim_A Plastocyanin; beta shee 98.6 1.2E-07 4.2E-12 81.5 8.7 86 450-573 19-105 (106)
82 2plt_A Plastocyanin; electron 98.6 8.1E-08 2.8E-12 81.3 6.6 77 74-162 18-98 (98)
83 1qhq_A Protein (auracyanin); e 98.5 6.3E-07 2.1E-11 81.2 12.0 92 70-162 29-139 (140)
84 1pcs_A Plastocyanin; electron 98.5 2.4E-07 8.3E-12 78.4 8.0 81 73-162 18-98 (98)
85 1bxv_A Plastocyanin; copper pr 98.5 2.8E-07 9.6E-12 76.7 7.8 74 73-162 18-91 (91)
86 1qhq_A Protein (auracyanin); e 98.4 4.5E-07 1.5E-11 82.2 8.7 104 452-573 34-139 (140)
87 3erx_A Pseudoazurin; copper pr 98.4 6.5E-07 2.2E-11 79.2 8.7 75 74-164 21-95 (123)
88 1b3i_A PETE protein, protein ( 98.4 4.7E-07 1.6E-11 76.4 7.0 77 74-162 19-97 (97)
89 1kdj_A Plastocyanin; electron 98.4 7.8E-07 2.7E-11 75.8 7.7 80 73-162 16-102 (102)
90 3tu6_A Pseudoazurin (blue copp 98.4 6.2E-07 2.1E-11 79.7 7.2 77 73-165 22-98 (127)
91 1byp_A Protein (plastocyanin); 98.3 1.9E-06 6.4E-11 73.0 9.1 77 74-162 17-99 (99)
92 1pcs_A Plastocyanin; electron 98.3 7E-07 2.4E-11 75.5 6.2 81 450-573 18-98 (98)
93 1plc_A Plastocyanin; electron 98.3 2.1E-06 7.3E-11 72.7 9.0 77 74-162 17-99 (99)
94 3ef4_A Pseudoazurin, blue copp 98.3 2E-06 6.8E-11 76.0 8.9 75 74-164 22-96 (124)
95 2plt_A Plastocyanin; electron 98.3 1.3E-06 4.4E-11 73.8 7.4 81 450-572 17-97 (98)
96 1bxv_A Plastocyanin; copper pr 98.3 2.8E-06 9.4E-11 70.6 8.9 73 450-572 18-90 (91)
97 1b3i_A PETE protein, protein ( 98.2 2.1E-06 7E-11 72.4 6.5 79 450-572 18-96 (97)
98 1byp_A Protein (plastocyanin); 98.1 6.3E-06 2.1E-10 69.7 7.5 84 449-572 15-98 (99)
99 1paz_A Pseudoazurin precursor; 98.1 8.9E-06 3E-10 71.9 8.4 76 73-164 20-95 (123)
100 1pmy_A Pseudoazurin; electron 98.1 7.7E-06 2.6E-10 72.3 7.9 76 73-164 20-95 (123)
101 3c75_A Amicyanin; copper prote 98.0 1.6E-05 5.5E-10 71.1 9.6 79 68-162 54-132 (132)
102 1iuz_A Plastocyanin; electron 98.0 1.7E-05 5.9E-10 66.9 8.6 78 73-162 17-98 (98)
103 1iby_A Nitrosocyanin; RED copp 98.0 1.7E-05 5.9E-10 68.7 8.7 74 451-573 38-111 (112)
104 1cuo_A Protein (azurin ISO-2); 98.0 5.7E-05 2E-09 67.1 11.7 89 74-163 18-129 (129)
105 1kdj_A Plastocyanin; electron 97.9 2.4E-05 8.3E-10 66.4 8.2 88 449-573 15-102 (102)
106 3ay2_A Lipid modified azurin p 97.9 5.6E-05 1.9E-09 70.0 11.0 98 65-163 47-167 (167)
107 4hci_A Cupredoxin 1; structura 97.9 5.1E-05 1.8E-09 64.2 9.0 73 451-573 28-100 (100)
108 2ccw_A Azurin II, AZN-2; elect 97.8 0.00015 5.3E-09 64.3 10.8 88 74-162 18-128 (129)
109 1id2_A Amicyanin; beta barrel, 97.8 0.00013 4.4E-09 62.6 9.8 79 68-162 28-106 (106)
110 1plc_A Plastocyanin; electron 97.7 8.7E-05 3E-09 62.6 7.5 84 449-572 15-98 (99)
111 3sbq_A Nitrous-oxide reductase 97.7 0.00011 3.9E-09 79.7 10.0 96 55-163 537-637 (638)
112 2ux6_A Pseudoazurin; type-1 co 97.7 0.00013 4.4E-09 64.3 8.4 73 74-164 21-93 (122)
113 2iaa_C Azurin; quinoprotein, t 97.6 0.00027 9.3E-09 62.6 10.2 87 74-162 17-127 (128)
114 1nwp_A Azurin; electron transp 97.6 0.00032 1.1E-08 62.2 10.4 87 74-162 18-128 (128)
115 2cal_A Rusticyanin; iron respi 97.6 0.00035 1.2E-08 64.0 10.7 88 451-572 61-153 (154)
116 1fwx_A Nitrous oxide reductase 97.4 0.00037 1.3E-08 77.1 10.3 78 450-574 512-592 (595)
117 2ov0_A Amicyanin; beta-sandwic 97.1 0.0017 5.8E-08 55.3 8.8 72 451-572 33-104 (105)
118 3ef4_A Pseudoazurin, blue copp 96.7 0.003 1E-07 55.5 7.2 38 535-576 60-97 (124)
119 3fsa_A Azurin; copper, cupredo 96.7 0.0092 3.1E-07 52.2 9.8 86 73-162 17-125 (125)
120 3erx_A Pseudoazurin; copper pr 96.7 0.0042 1.4E-07 54.5 7.6 35 536-574 60-94 (123)
121 3tu6_A Pseudoazurin (blue copp 96.7 0.0033 1.1E-07 55.5 6.9 36 536-575 62-97 (127)
122 1iuz_A Plastocyanin; electron 96.6 0.0073 2.5E-07 50.5 8.1 40 529-572 58-97 (98)
123 1paz_A Pseudoazurin precursor; 95.6 0.029 9.9E-07 49.1 7.6 35 536-574 60-94 (123)
124 2cua_A Protein (CUA); CUA cent 95.4 0.079 2.7E-06 47.1 9.9 72 74-162 60-134 (135)
125 1id2_A Amicyanin; beta barrel, 95.4 0.063 2.1E-06 45.5 8.7 34 533-572 72-105 (106)
126 3c75_A Amicyanin; copper prote 95.1 0.074 2.5E-06 47.0 8.7 72 451-572 60-131 (132)
127 3s8f_B Cytochrome C oxidase su 95.1 0.099 3.4E-06 48.2 9.5 85 63-162 82-167 (168)
128 1pmy_A Pseudoazurin; electron 95.0 0.055 1.9E-06 47.3 7.3 36 535-574 59-94 (123)
129 3ay2_A Lipid modified azurin p 94.3 0.18 6.2E-06 46.4 9.4 45 528-573 120-166 (167)
130 1cuo_A Protein (azurin ISO-2); 93.9 0.32 1.1E-05 42.8 9.7 44 529-573 82-128 (129)
131 2ux6_A Pseudoazurin; type-1 co 93.3 0.17 6E-06 44.0 6.9 33 536-574 60-92 (122)
132 3sbq_A Nitrous-oxide reductase 93.1 0.32 1.1E-05 53.1 9.9 79 450-573 557-636 (638)
133 2cua_A Protein (CUA); CUA cent 92.7 0.48 1.6E-05 41.9 9.0 38 534-573 94-134 (135)
134 3fsa_A Azurin; copper, cupredo 91.4 0.53 1.8E-05 41.0 7.4 103 451-573 18-125 (125)
135 2ccw_A Azurin II, AZN-2; elect 91.3 1.5 5.1E-05 38.4 10.4 44 529-573 82-128 (129)
136 2iaa_C Azurin; quinoprotein, t 90.8 1.4 4.9E-05 38.4 9.8 45 528-573 80-127 (128)
137 1nwp_A Azurin; electron transp 87.7 4.2 0.00014 35.4 10.5 44 528-572 81-127 (128)
138 3s8f_B Cytochrome C oxidase su 84.9 3.6 0.00012 37.6 8.9 39 535-573 128-167 (168)
139 2r39_A FIXG-related protein; s 78.3 3.9 0.00013 34.9 6.2 48 242-303 34-82 (118)
140 1cyx_A CYOA; electron transpor 54.6 12 0.00041 35.2 4.6 72 75-162 42-115 (205)
141 3isy_A Bsupi, intracellular pr 50.5 38 0.0013 29.0 6.7 71 64-146 24-100 (120)
142 1nep_A EPV20, BNPC2, epididyma 40.3 48 0.0017 28.5 6.0 25 112-136 71-95 (130)
143 3hb3_B Cytochrome C oxidase su 32.3 63 0.0021 32.2 6.0 77 450-575 188-265 (298)
144 2c34_A ICP, inhibitor of cyste 32.1 1.2E+02 0.0041 25.5 7.0 68 73-141 14-89 (116)
145 1xwv_A DER F II; beta sheets, 31.4 97 0.0033 26.5 6.4 18 119-136 76-93 (129)
146 3isy_A Bsupi, intracellular pr 30.1 1.4E+02 0.0047 25.4 7.0 61 239-304 16-88 (120)
147 1x9u_A Umecyanin; cupredoxin, 29.7 48 0.0016 28.1 4.0 43 131-173 72-115 (116)
148 2gsm_B Cytochrome C oxidase su 29.3 73 0.0025 31.1 5.8 75 74-164 171-247 (262)
149 1cyx_A CYOA; electron transpor 27.7 1.5E+02 0.0052 27.7 7.4 74 451-573 41-115 (205)
150 3hb3_B Cytochrome C oxidase su 25.9 94 0.0032 30.9 6.0 75 74-164 189-265 (298)
151 3rfr_A PMOB; membrane, oxidore 25.1 46 0.0016 34.2 3.5 42 111-154 100-143 (419)
152 1xvs_A Protein APAG; MCSG APC2 24.3 86 0.0029 27.0 4.7 47 242-292 31-81 (126)
153 2gsm_B Cytochrome C oxidase su 23.8 96 0.0033 30.2 5.5 76 450-574 170-246 (262)
154 1tza_A APAG protein, SOR45; st 23.5 92 0.0031 27.1 4.7 47 242-292 31-81 (134)
155 2f1e_A Protein APAG; APAG prot 22.0 99 0.0034 26.6 4.6 47 242-292 32-82 (127)
156 2h7w_A Chagasin; beta-strands, 21.2 3.2E+02 0.011 23.4 7.8 65 73-141 32-104 (131)
157 1v54_B Cytochrome C oxidase po 21.1 1.1E+02 0.0039 29.0 5.3 75 74-164 140-216 (227)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2.1e-96 Score=823.49 Aligned_cols=501 Identities=24% Similarity=0.396 Sum_probs=382.1
Q ss_pred CceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCcee
Q psy4302 19 PMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVT 98 (613)
Q Consensus 19 ~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~t 98 (613)
+++++|+|+|++. .+.+||.++.+|+|||++|||+|+|++||+|+|+|+|+|+.++++
T Consensus 1 ~~~~~y~~~v~~~----------------------~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~ts 58 (552)
T 1aoz_A 1 SQIRHYKWEVEYM----------------------FWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVV 58 (552)
T ss_dssp CCEEEEEEEEEEE----------------------EECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBC
T ss_pred CeEEEEEEEEEEE----------------------EEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCee
Confidence 4789999999974 368999999999999999999999999999999999999767999
Q ss_pred EEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCCC
Q psy4302 99 IHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDY 178 (613)
Q Consensus 99 iHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~ 178 (613)
|||||+++.+++||||+|++|||+|+||++|+|+|+++++||||||||.+.|+++||+|+|||++++.. ..+|++|
T Consensus 59 iHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~---~~~~~~d- 134 (552)
T 1aoz_A 59 IHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGK---KEPFHYD- 134 (552)
T ss_dssp EEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTC---CCSSCCS-
T ss_pred EEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCccc---CCCCCCC-
Confidence 999999999999999999999999999999999999999999999999999999999999999987432 2245666
Q ss_pred CceEEEEeeeccCCCCcccCCCCCC--CCCCCCcceeecCcccccCCCC----------C---CCCCccceEEEeCCcEE
Q psy4302 179 PSHTIIITDWLHGMTDAKFPGNTYA--NFGTRTESFLINGRSVFKSGNG----------T---SNPVPYSKFKVNKGLRH 243 (613)
Q Consensus 179 ~e~~l~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~lING~~~~~~~~~----------~---~~~~~~~~~~v~~G~~~ 243 (613)
.|++|+|+||+++.....+...... .....++++||||++.++|... . ....+++.++|++|++|
T Consensus 135 ~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~ 214 (552)
T 1aoz_A 135 GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTY 214 (552)
T ss_dssp EEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEE
T ss_pred ccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEE
Confidence 4899999999998654432111110 1113578999999998644211 0 11223458999999999
Q ss_pred EEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccceeeeecccEEEEc-cCCccC----------cCCC
Q psy4302 244 RFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNI-NLDAAH----------MGSR 312 (613)
Q Consensus 244 rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a-~~~~~~----------~~~~ 312 (613)
||||||++.. +.+.|+|+||+|+||++||.+++|+.+++|.|+||||| ||+|++ +++++. ....
T Consensus 215 RlRliNa~~~-~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~----dvlv~~~~~~~g~y~i~~~~~~~~~~~ 289 (552)
T 1aoz_A 215 RIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESY----SVLITTDQNPSENYWVSVGTRARHPNT 289 (552)
T ss_dssp EEEEEECCSS-CEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEE----EEEEECCSCTTCCEEEEEEEESSCCCS
T ss_pred EEEEEccccc-ceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEE----EEEEEcCCCCCCCEEEEEEcccCCCCC
Confidence 9999999987 48999999999999999999999999999999999999 999999 454442 1234
Q ss_pred CceeEEEEecccCC--CCCCCCCCCCC-CC---cccccCcCCCCCCccccccCCCCceEEEEEEeeeeeccCccccCCcc
Q psy4302 313 RDRLNILRLRKSLN--ALDSSDCSDTN-PN---VCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDED 386 (613)
Q Consensus 313 ~~~~ail~Y~~~~~--~~~~~~~~~~~-~~---~~~~~l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~ 386 (613)
....|||+|.+... .+....+..+. .. .|...++.+...... .....+++++.+.+.....
T Consensus 290 ~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~--~~~~~~~~~~~l~~~~~~~----------- 356 (552)
T 1aoz_A 290 PPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSP--KPPVKFNRRIFLLNTQNVI----------- 356 (552)
T ss_dssp CCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCC--CCCSSCSEEEEEEEEEEEE-----------
T ss_pred ccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCC--CCCCCCcEEEEEEEeeccC-----------
Confidence 56789999997432 11111011110 00 011112222110010 1223467777666543211
Q ss_pred cceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCC-----------CCCCC--CccCCccccCCccceeeEEE
Q psy4302 387 EYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEME-----------CPKDR--SVCGKSAEKGGKLCECVEII 453 (613)
Q Consensus 387 ~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~ 453 (613)
.+...|.|||++|..|..|+|.+...-..+.| |.+.. ..| ...|.|+.++
T Consensus 357 ----------~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~t~~~ 419 (552)
T 1aoz_A 357 ----------NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN-------EKTRIGNGVY 419 (552)
T ss_dssp ----------TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCC-------TTCEEECCCE
T ss_pred ----------CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCcccccccccccccccc-------ccccccceEE
Confidence 12457999999999999998866431111111 11100 111 3567889999
Q ss_pred EecCCCEEEEEEEeCCCCCC---CCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccc
Q psy4302 454 KVGLNQVAEIIFIDWIGPTS---TFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKD 530 (613)
Q Consensus 454 ~v~~g~~ve~vl~N~~~~~~---~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kD 530 (613)
.++.|++|||+|+|. +.+. ...||||||||+|+||++|. +.++ . . +...+|+.+|+|||
T Consensus 420 ~~~~g~~v~ivi~N~-~~~~~~~~~~HP~HLHGh~F~Vl~~g~-G~~~-------~-~--------~~~~~n~~~p~~RD 481 (552)
T 1aoz_A 420 QFKIGEVVDVILQNA-NMMKENLSETHPWHLHGHDFWVLGYGD-GKFS-------A-E--------EESSLNLKNPPLRN 481 (552)
T ss_dssp EECTTCEEEEEEEEC-CCSSTTCCCCEEEEETTCCEEEEEEEE-SSCC-------G-G--------GGGGSCCSSCCEES
T ss_pred EecCCCEEEEEEeCC-cccccccCCCCCEEEcCCceEEEeccc-CccC-------c-c--------cccccccCCCCccC
Confidence 999999999999998 5432 46799999999999999975 4433 1 0 12246889999999
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPPEFPTCNNYLPPVDPNE 599 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~p~~~p~C~~~~~~~~~~~ 599 (613)
||.||++||++|||+|||||.|+|||||+||++.|||++|.|+.. +++++|+++++||+|++.+..+.
T Consensus 482 Tv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~~~~~P~~~~~C~~~~~~~~~~~ 549 (552)
T 1aoz_A 482 TVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-KVGRIPTKALACGGTAKSLINNP 549 (552)
T ss_dssp EEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-GCCCCCHHHHSSHHHHHHHSCCC
T ss_pred eEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-hhccCCcchhhhhccCcccccCC
Confidence 999999999999999999999999999999999999999999754 89999999999999987766553
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.3e-94 Score=804.07 Aligned_cols=503 Identities=26% Similarity=0.427 Sum_probs=369.7
Q ss_pred cCCCC-CCCCceEEEEEEEeEeeecccccccCCCCCccc-c--ccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEE
Q psy4302 11 ARPCD-GAKPMVCYYHFTLENYATIGPACGNCINGTMDD-C--FKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVV 86 (613)
Q Consensus 11 ~r~c~-~~~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v 86 (613)
++.|. ++..|.||.+|.|.--+. ...|.+.+.. . .+...+.+||+++.+|+|||++|||+|+|++||+|+|
T Consensus 36 ~~~c~~~~~~r~~w~~~~i~t~~~-----~~~p~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V 110 (580)
T 3sqr_A 36 TASCANSATSRSCWGEYSIDTNWY-----DVTPTGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLII 110 (580)
T ss_dssp --CBCCBTTBTTEEBTEETTSCTT-----TCCCCCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEE
T ss_pred cccCCCCCCCCccccCCCcCcccc-----ccCCCceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEE
Confidence 34564 667788886655542110 1223222221 1 1234578999999999999999999999999999999
Q ss_pred EEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCcccccCCceeeEEEeCCCC
Q psy4302 87 DVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKK 166 (613)
Q Consensus 87 ~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~ 166 (613)
+|+|+|+.++++|||||++|++++||||+|++|||||+||++|+|+|+++++||||||||.+.|+++||+|+|||+++..
T Consensus 111 ~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~ 190 (580)
T 3sqr_A 111 HVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT 190 (580)
T ss_dssp EEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred EEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCccc
Confidence 99999986799999999999999999999999999999999999999999999999999999999999999999998743
Q ss_pred CCCCCCCCCCCCCceEEEEeeeccCCCCcccCCCCCCCCCCCCcceeecCcccccCCCC----CCCCCccceEEEeCCcE
Q psy4302 167 ADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNG----TSNPVPYSKFKVNKGLR 242 (613)
Q Consensus 167 ~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~----~~~~~~~~~~~v~~G~~ 242 (613)
..||.| ..+|+|+||+++...+.+.... ..+...++++||||++.+.|... +......+.+.|++|++
T Consensus 191 -----~~yD~d--~~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~ 262 (580)
T 3sqr_A 191 -----ADYDED--VGVIFLQDWAHESVFEIWDTAR-LGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTK 262 (580)
T ss_dssp -----SCCSEE--EEEEEEEEECSSCHHHHHHHHT-TSCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCE
T ss_pred -----CCCCcc--ceEEEEEEEecCCHHHHHHHHh-ccCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCE
Confidence 235544 2499999999987654332211 23356789999999998765421 12344568999999999
Q ss_pred EEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccceeeeecccEEEEccCCccC--------c-----
Q psy4302 243 HRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAAH--------M----- 309 (613)
Q Consensus 243 ~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~--------~----- 309 (613)
|||||||++... .+.|+|+||+|+||++||.+++|+.+++|.|+||||| ||+|+++++++. .
T Consensus 263 yRlRlINa~~~~-~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRy----dVlv~a~~~~g~Y~i~a~~~~~~~~~ 337 (580)
T 3sqr_A 263 YRLRLINVGIDS-HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRY----DVIVEANAAADNYWIRGNWGTTCSTN 337 (580)
T ss_dssp EEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEE----EEEEECCSCSSEEEEECCCCTTTSCB
T ss_pred EEEEEEeccCCc-eeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEE----EEEEEeCCCCCeEEEEEecccccCcc
Confidence 999999999885 8999999999999999999999999999999999999 999999988762 1
Q ss_pred CCCCceeEEEEecccCCC-CCCCCCCCCCCCccccc-CcCCCCCCccccccCCCCceEEEEEEeeeeeccCccccCCccc
Q psy4302 310 GSRRDRLNILRLRKSLNA-LDSSDCSDTNPNVCWNH-VNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDE 387 (613)
Q Consensus 310 ~~~~~~~ail~Y~~~~~~-~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~ 387 (613)
.......|||+|.+.... +... .. +....|.++ +..+.|.... .....++.++ .+.+.
T Consensus 338 ~~~~~~~aiL~Y~~~~~~~P~~~-~~-~~~~~~~~~~~~~L~P~~~~--~~~~~~~~~~--~l~~~-------------- 397 (580)
T 3sqr_A 338 NEAANATGILRYDSSSIANPTSV-GT-TPRGTCEDEPVASLVPHLAL--DVGGYSLVDE--QVSSA-------------- 397 (580)
T ss_dssp TTGGGCEEEEESSTTCCCCCCCC-CC-CCCCCSCCSCGGGCCBSSCC--BCCSEEEEEE--EEEEE--------------
T ss_pred CCCCceEEEEEECCCCCCCCCCC-CC-CccchhhcccccccccCCCC--CCCCccceEE--EEEec--------------
Confidence 122357899999864321 1111 11 111134332 2345443222 1111122222 22221
Q ss_pred ceeeeecCCCceeeEEecceeccC-CCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEec----CCCEEE
Q psy4302 388 YHRWFQSSPNVIKTHVTNNISLGI-LPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVG----LNQVAE 462 (613)
Q Consensus 388 ~~~~~~~~~~~~~~~~iN~~s~~~-p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~g~~ve 462 (613)
.+....|.|||++|.. +..|+|.+...- ...| ....+++.++ .|++||
T Consensus 398 --------~~~~~~w~iN~~s~~~~~~~P~L~~~~~g-~~~~------------------~~~~~~~~~~~~~~~~~~Ve 450 (580)
T 3sqr_A 398 --------FTNYFTWTINSSSLLLDWSSPTTLKIFNN-ETIF------------------PTEYNVVALEQTNANEEWVV 450 (580)
T ss_dssp --------ESSSEEEEETTBCCCCCTTSCHHHHHHTT-CCCC------------------CGGGCEEEECC----CCEEE
T ss_pred --------cCCceeEEECCEecccCCCCCchhhhhcC-CccC------------------CCCcceeecccccCCCcEEE
Confidence 1134579999999975 577877654310 0111 1123455555 699999
Q ss_pred EEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEE
Q psy4302 463 IIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVV 542 (613)
Q Consensus 463 ~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vI 542 (613)
|+|+|. +. ....||||||||+|+||++|. +.++. ..+...+|+.+|++||||.||++||++|
T Consensus 451 iVi~n~-~~-~~~~HP~HLHGh~F~vv~~g~-G~f~~---------------~~~~~~~nl~nP~~rDTv~v~~~g~~~i 512 (580)
T 3sqr_A 451 YVIEDL-TG-FGIWHPIHLHGHDFFIVAQET-DVFNS---------------DESPAKFNLVNPPRRDVAALPGNGYLAI 512 (580)
T ss_dssp EEEEEC-SS-SCCCEEEEESSCCEEEEEEES-SCCCT---------------TTSGGGCCCBSCCEESEEEECTTSEEEE
T ss_pred EEEeCC-Cc-cccceeeEecCceEEEEecCC-CccCc---------------cccccccccCCCceeeEEEeCCCceEEE
Confidence 999998 42 146999999999999999987 55430 0123457999999999999999999999
Q ss_pred EEEecCcceeEEeechhhhhhcCceEEEEeccCCCCCC---CCCCCC-CCCCCCCCCCC
Q psy4302 543 RVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQ---TPPEFP-TCNNYLPPVDP 597 (613)
Q Consensus 543 rf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~~---~p~~~p-~C~~~~~~~~~ 597 (613)
||++||||.|+|||||+||++.||+++|.++. +++++ +|+.+. .|.+|......
T Consensus 513 rf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~-~~i~~~~~~~~~~~~~C~~~~~~~~~ 570 (580)
T 3sqr_A 513 AFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ-SSIAVKMTDTAIFEDTCANWNAYTPT 570 (580)
T ss_dssp EEESCSCEEEEEEECSHHHHHTTCEEEEEESG-GGCCCCHHHHHHHHHHHHHHHHHGGG
T ss_pred EEEcCCCeeeEEEECcHHHhhCCCcEEEEECH-HHHhhccCCcHHHHHhhHHHhhhccc
Confidence 99999999999999999999999999999864 44443 455543 69888554333
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=9.4e-92 Score=772.26 Aligned_cols=452 Identities=28% Similarity=0.461 Sum_probs=347.7
Q ss_pred ecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC----CceeEEeCCCcccCCCCCCCCCccccccCCCCCeEE
Q psy4302 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD----RVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYR 130 (613)
Q Consensus 55 ~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~----~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~ 130 (613)
+++||++|.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|+|||||++|++++||||+|++|||||+||++|+
T Consensus 15 ~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~t 94 (499)
T 3pxl_A 15 VSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFL 94 (499)
T ss_dssp ECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEE
T ss_pred EcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEE
Confidence 7899999999999999999999999999999999999984 479999999999999999999999999999999999
Q ss_pred EEEee-cCCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCCCCCCCCCCC
Q psy4302 131 YKFPA-MPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRT 209 (613)
Q Consensus 131 Y~f~~-~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~ 209 (613)
|+|++ +++||||||||.+.|+.+||+|+|||+++. ++....|++|..|++|+++||+++..... ...+..+
T Consensus 95 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~--~~~~~~~~~d~~~~~l~l~Dw~~~~~~~~------~~~p~~~ 166 (499)
T 3pxl_A 95 YDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--DPHASRYDVDNDDTVITLADWYHTAAKLG------PRFPGGA 166 (499)
T ss_dssp EEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSGGGEEEEEEECSSCTTTS------CSSCSSC
T ss_pred EEEEcCCCCceeeeeccchhHHhccceeEEEEcCCc--ccccccCCCCCceEEEEEEcccCCccccc------cCCCCCC
Confidence 99999 689999999999999999999999999874 34445677776678999999999765331 1223468
Q ss_pred cceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccc
Q psy4302 210 ESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPG 289 (613)
Q Consensus 210 ~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pg 289 (613)
+++||||++++.+. .....+.++|++|++|||||||++.. +.+.|+|+||+|+||++||.+++|+.+++|.|+||
T Consensus 167 d~~liNG~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pG 241 (499)
T 3pxl_A 167 DATLINGKGRAPSD----SVAELSVIKVTKGKRYRFRLVSLSCN-PNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAA 241 (499)
T ss_dssp SEEEETTBCCCTTC----TTCCCCEEEECTTCEEEEEEEECCSS-CCEEEEETTBCEEEEEETTEEEEEEEESBEEECTT
T ss_pred cEEEECCCCcCCCC----CCCCcceEEEcCCCEEEEEEEecCCC-eeEEEEECCCeEEEEEECCcccCceEeeeEEECCC
Confidence 99999999875432 12356899999999999999999987 48999999999999999999999999999999999
Q ss_pred eeeeecccEEEEccCCccC-------c--C---CCCceeEEEEecccCCCCCCCCCCCCCCCccc--ccCcCCCCCCccc
Q psy4302 290 QYTPVNSAIVLNINLDAAH-------M--G---SRRDRLNILRLRKSLNALDSSDCSDTNPNVCW--NHVNSLTPATEKA 355 (613)
Q Consensus 290 eR~~~~~dv~v~a~~~~~~-------~--~---~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~ 355 (613)
||| ||+|+++++.+. . . ......|||+|.+........ .. .....+. .+|..+.+.....
T Consensus 242 qR~----dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~-~~-~~~~~~~~~~~L~p~~~~~~p~ 315 (499)
T 3pxl_A 242 QRY----SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTT-NQ-TTSVKPLNEVDLHPLVSTPVPG 315 (499)
T ss_dssp CEE----EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCC-CC-CCCSSBCCGGGCCBSSCCCCSS
T ss_pred cEE----EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCC-CC-CCCCcccccccccccccccCCC
Confidence 999 999999998652 0 1 112347999998743211111 00 0111121 2233332211100
Q ss_pred cccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCc
Q psy4302 356 TVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSV 435 (613)
Q Consensus 356 ~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~ 435 (613)
......+|.++.+.+.+. + ..|+|||++|..|..|+|.+... +..-.
T Consensus 316 ~~~~~~~d~~~~l~~~~~-----------------------~--~~w~iNg~s~~~~~~P~L~~~~~--g~~~~------ 362 (499)
T 3pxl_A 316 APSSGGVDKAINMAFNFN-----------------------G--SNFFINGASFVPPTVPVLLQILS--GAQTA------ 362 (499)
T ss_dssp CSSTTCSSEEEECCEEEC-----------------------S--SCEEETTBCCCCCSSCHHHHHHT--TCCST------
T ss_pred cccCCCCcEEEEEEEEec-----------------------C--cEEEEcCEecCCCCCchhhhhhc--CCccc------
Confidence 011234566655444320 0 15889999999999998876431 10000
Q ss_pred cCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccC
Q psy4302 436 CGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREG 515 (613)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~ 515 (613)
........++.++.|++|||+|+|. +......||||||||+|+||++++.
T Consensus 363 --------~~~~~~~~v~~~~~g~~V~ivl~~~-~n~~~~~HP~HLHGh~F~Vl~~~g~--------------------- 412 (499)
T 3pxl_A 363 --------QDLLPSGSVYVLPSNASIEISFPAT-AAAPGAPHPFHLHGHTFAVVRSAGS--------------------- 412 (499)
T ss_dssp --------TTSSSTTSEEEECTTCEEEEEEECC-TTSCSCSCEEEETTCCEEEEECTTC---------------------
T ss_pred --------cccCCCceeEEecCCCEEEEEEecC-cccCCCCccceecCCcEEEEeccCC---------------------
Confidence 0111234588999999999999953 2224578999999999999986431
Q ss_pred CCCCCCCCCCCCccceEEcCC---CcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccCCCCC---CCCCCC-CCC
Q psy4302 516 PDLATKIRPQPCVKDTVTIPP---NGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFV---QTPPEF-PTC 588 (613)
Q Consensus 516 ~~~~~~n~~~p~~kDTv~Vp~---~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~---~~p~~~-p~C 588 (613)
..+|+.+|+||||+.||+ +||++|||+|||||.|+|||||+||++.||+++|.++ +++++ ++|+.+ ..|
T Consensus 413 ---~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~-~~~~~~~~~~p~~~~~~C 488 (499)
T 3pxl_A 413 ---TVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED-TPDVKAVNPVPQAWSDLC 488 (499)
T ss_dssp ---CCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES-GGGHHHHSCCCHHHHTHH
T ss_pred ---cccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC-hhHhccccCCCHHHHHhh
Confidence 135788999999999997 8999999999999999999999999999999999765 44443 356654 469
Q ss_pred CCCC
Q psy4302 589 NNYL 592 (613)
Q Consensus 589 ~~~~ 592 (613)
..|.
T Consensus 489 ~~~~ 492 (499)
T 3pxl_A 489 PTYD 492 (499)
T ss_dssp HHHH
T ss_pred hHhh
Confidence 8873
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=9.4e-92 Score=772.20 Aligned_cols=453 Identities=29% Similarity=0.455 Sum_probs=346.1
Q ss_pred eecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC----CceeEEeCCCcccCCCCCCCCCccccccCCCCCeE
Q psy4302 54 CVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD----RVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTY 129 (613)
Q Consensus 54 ~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~----~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~ 129 (613)
.+++||++|.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|+|||||++|++++||||+|++|||||+||++|
T Consensus 15 ~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sf 94 (495)
T 3t6v_A 15 DIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSF 94 (495)
T ss_dssp EECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEE
T ss_pred EEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeE
Confidence 37899999999999999999999999999999999999984 37999999999999999999999999999999999
Q ss_pred EEEEee-cCCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCCCCCCCCCC
Q psy4302 130 RYKFPA-MPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTR 208 (613)
Q Consensus 130 ~Y~f~~-~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~ 208 (613)
+|+|++ +++||||||||.+.|+.+||+|+|||+++. ++....|++|..|.+|+++||+++..... ....+..
T Consensus 95 tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~--~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-----~~~~p~~ 167 (495)
T 3t6v_A 95 SYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN--DPDANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAIT 167 (495)
T ss_dssp EEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSGGGEEEEEEECSSCGGGS-----CSSSCCC
T ss_pred EEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc--ccccccCCCCCceeEEEEecccCCchhhh-----ccCCCCC
Confidence 999999 689999999999999999999999999873 34445677776678999999999876432 1122346
Q ss_pred CcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEcc
Q psy4302 209 TESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFP 288 (613)
Q Consensus 209 ~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~p 288 (613)
++++||||++++.+.. ...+.+.++|++|++|||||||++.. +.+.|+|+||+|+||++||.+++|+.+++|.|+|
T Consensus 168 ~d~~liNG~g~~~~~~---~~~~~~~~~v~~G~~~RlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~p 243 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNV---AAVPLSVITVEVGKRYRMRLVSISCD-PNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFA 243 (495)
T ss_dssp CSEEEETTBCCBSSSC---CCCCCCEEEECTTCEEEEEEEECCSS-CCEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CcEEEECCcCcCCCCc---ccCCceEEEEcCCCEEEEEEEecCCC-eeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcC
Confidence 8999999998754321 12356899999999999999999987 4899999999999999999999999999999999
Q ss_pred ceeeeecccEEEEccCCccC-------c--C---CCCceeEEEEecccCCCCCCCCCCCCCCCcccc--cCcCCCCCCcc
Q psy4302 289 GQYTPVNSAIVLNINLDAAH-------M--G---SRRDRLNILRLRKSLNALDSSDCSDTNPNVCWN--HVNSLTPATEK 354 (613)
Q Consensus 289 geR~~~~~dv~v~a~~~~~~-------~--~---~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~ 354 (613)
|||| ||+|+++++.+. . . ......|||+|.+........ ........+.. +|..+.+....
T Consensus 244 GqR~----dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~-~~~~~~~~~~~~~~L~p~~~~~~p 318 (495)
T 3t6v_A 244 AQRY----SFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVT-VASTVHTKCLIETDLHPLSRNGVP 318 (495)
T ss_dssp TCEE----EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCC-CCCSSCSSBCCGGGCCBSSCCCCS
T ss_pred ceEE----EEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCC-CCCCCCccccccccccccccccCC
Confidence 9999 999999998652 0 1 112347999998743211111 00000111222 23333221110
Q ss_pred ccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCC
Q psy4302 355 ATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRS 434 (613)
Q Consensus 355 ~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~ 434 (613)
.......+|.++.+.+.+. + ..|.|||++|..|..|+|.+... +..-.
T Consensus 319 ~~~~~~~~d~~~~l~~~~~-----------------------~--~~w~iNg~s~~~~~~P~L~~~~~--g~~~~----- 366 (495)
T 3t6v_A 319 GNPHQGGADCNLNLSLGFA-----------------------C--GNFVINGVSFTPPTVPVLLQICS--GANTA----- 366 (495)
T ss_dssp SCSSTTCSSEEEECCEEEE-----------------------T--TEEEETTBCCCCCSSCHHHHHHT--TCCSS-----
T ss_pred CccCCCCCcEEEEEEEEec-----------------------C--cEEEEcCEecCCCCCcchhhhhc--CCcCc-----
Confidence 0011223566555444320 0 16889999999888898766531 10000
Q ss_pred ccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhcc
Q psy4302 435 VCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLARE 514 (613)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (613)
........++.++.|++|||+|+|. . ....||||||||+|+||++++.
T Consensus 367 ---------~~~~~~~~v~~~~~g~~V~ivl~~n-~--~~~~HP~HLHGh~F~vl~~~g~-------------------- 414 (495)
T 3t6v_A 367 ---------ADLLPSGSVISLPSNSTIEIALPAG-A--AGGPHPFHLHGHDFAVSESASN-------------------- 414 (495)
T ss_dssp ---------TTSSSTTSEEEECTTCEEEEEEECC-S--SSCCCEEEETTCCEEEEECTTC--------------------
T ss_pred ---------ccccCCcceEEecCCCEEEEEEccC-C--CCCCcceeecCCcEEEEecCCC--------------------
Confidence 0111234588999999999999843 1 3569999999999999986431
Q ss_pred CCCCCCCCCCCCCccceEEcCC-CcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccCCCC---CCCCCCC-CCCC
Q psy4302 515 GPDLATKIRPQPCVKDTVTIPP-NGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDF---VQTPPEF-PTCN 589 (613)
Q Consensus 515 ~~~~~~~n~~~p~~kDTv~Vp~-~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~---~~~p~~~-p~C~ 589 (613)
..+|+.+|+|||||.||+ +||++|||+|||||.|+|||||+||++.||+++|.++. +++ .++|+.. ..|.
T Consensus 415 ----~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~-~~~~~~~~~p~~~~~~C~ 489 (495)
T 3t6v_A 415 ----STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI-PNTASANPVPEAWSNLCP 489 (495)
T ss_dssp ----CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH-HHHHHHCCCCHHHHHHHH
T ss_pred ----CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh-hHhccccCCCHHHHHHhh
Confidence 135788999999999997 89999999999999999999999999999999997753 333 2356554 3577
Q ss_pred CC
Q psy4302 590 NY 591 (613)
Q Consensus 590 ~~ 591 (613)
.|
T Consensus 490 ~~ 491 (495)
T 3t6v_A 490 SY 491 (495)
T ss_dssp HH
T ss_pred Hh
Confidence 66
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-90 Score=770.75 Aligned_cols=470 Identities=22% Similarity=0.390 Sum_probs=360.5
Q ss_pred ceEEEEEEEeEeeecccccccCCCCCccccccceeecCCC-eEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCcee
Q psy4302 20 MVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADG-VERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVT 98 (613)
Q Consensus 20 ~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~t 98 (613)
++++|+|+|.+.. +.+|| .++.+|+|||++|||+|+|++||+|+|+|+|+|+.++|+
T Consensus 1 ~~~~~~~~v~~~~----------------------~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~ts 58 (534)
T 1zpu_A 1 ETHTFNWTTGWDY----------------------RNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTS 58 (534)
T ss_dssp CEEEEEEEEEEEE----------------------ECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBC
T ss_pred CEEEEEEEEEEEE----------------------ecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCee
Confidence 4688999999743 68999 799999999999999999999999999999999868999
Q ss_pred EEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeec-CCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCC
Q psy4302 99 IHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAM-PYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTD 177 (613)
Q Consensus 99 iHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~-~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d 177 (613)
|||||++|++++||||+|++|||||+||++|+|+|+++ ++||||||||.+.|+++||+|+|||+++. +| +++|
T Consensus 59 iHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~p----~~~d 132 (534)
T 1zpu_A 59 MHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS--FP----YDYD 132 (534)
T ss_dssp CEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT--CC----SCCS
T ss_pred EEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC--CC----CCCc
Confidence 99999999999999999999999999999999999998 99999999999999999999999999873 23 2444
Q ss_pred CCceEEEEeeeccCCCCcccC---CCCC-CCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCC
Q psy4302 178 YPSHTIIITDWLHGMTDAKFP---GNTY-ANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCL 253 (613)
Q Consensus 178 ~~e~~l~l~d~~~~~~~~~~~---~~~~-~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 253 (613)
. |++|+|+||+++...+.+. .... ......++.+||||+.. +.++|++|++|||||||+|..
T Consensus 133 ~-e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~-------------~~~~v~~g~~~RlRliNa~~~ 198 (534)
T 1zpu_A 133 E-ELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN-------------LTWEVQPDTTYLLRIVNVGGF 198 (534)
T ss_dssp E-EEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSS-------------CEEECCSSCEEEEEEEECCSS
T ss_pred c-eEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCc-------------eEEEEECCCEEEEEEEeccCC
Confidence 3 7999999999987644321 1111 12245689999999976 899999999999999999998
Q ss_pred CCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccceeeeecccEEEEccCCc-cC-------c---------CCCCcee
Q psy4302 254 ACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDA-AH-------M---------GSRRDRL 316 (613)
Q Consensus 254 ~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~-~~-------~---------~~~~~~~ 316 (613)
. .+.|+|+||+|+||++||.+++|..+++|.|+||||| ||+|++++.. +. . .......
T Consensus 199 ~-~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~----dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ 273 (534)
T 1zpu_A 199 V-SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRY----TVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNAT 273 (534)
T ss_dssp C-CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEE----EEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEE
T ss_pred c-eEEEEEcCCeeEEEeccCcCccccEeceEEECccceE----EEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceE
Confidence 4 8999999999999999999999999999999999999 9999998753 21 1 1234567
Q ss_pred EEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCC
Q psy4302 317 NILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSP 396 (613)
Q Consensus 317 ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (613)
|+|+|.+....+... .......|..+. .+.+.+.. .....+++++.+.+.+... .
T Consensus 274 ail~y~~~~~~p~~~--~~~~~~~~~~~~-~l~p~~~~--~~~~~~~~~~~l~~~~~~~--------------------~ 328 (534)
T 1zpu_A 274 SYMVYNKTAALPTQN--YVDSIDNFLDDF-YLQPYEKE--AIYGEPDHVITVDVVMDNL--------------------K 328 (534)
T ss_dssp EEEESCTTSCBCCCC--CCSCSSCSCCGG-GCCBSSCC--CCCCSCSEEEEEEEEEEEC--------------------T
T ss_pred EEEEeCCCCCCCCCC--cccccccccccc-cceeCCCC--CCCCCCCeEEEEEEEeecc--------------------C
Confidence 999998643211111 000011112221 12232221 2224567777666554211 1
Q ss_pred CceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCC
Q psy4302 397 NVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFL 476 (613)
Q Consensus 397 ~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~ 476 (613)
++...|.|||++|..|..|+|.+.... ..+..+. ..++.+++++.++.|++|||+|+|. + .+.
T Consensus 329 ~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~~~~-----------~~~~~~~~~~~~~~g~~v~ivi~N~-~---~~~ 391 (534)
T 1zpu_A 329 NGVNYAFFNNITYTAPKVPTLMTVLSS--GDQANNS-----------EIYGSNTHTFILEKDEIVEIVLNNQ-D---TGT 391 (534)
T ss_dssp TSCEEEEETTBCCCCCSSCHHHHHTTS--GGGTTCG-----------GGGCSSSCEEEECTTCEEEEEEEEC-S---SSC
T ss_pred CceeEEEECCCcccCCCCCceeeeccc--CcccCCC-----------cccCCCceEEEeCCCCEEEEEEeCC-C---CCC
Confidence 122357899999999999988765421 1111100 2233456789999999999999998 4 469
Q ss_pred CCeeeecCcEEEEEeccC------C---CcccccccccchHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEEec
Q psy4302 477 HPMHLHGTDIYIIEQGII------P---VAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFN 547 (613)
Q Consensus 477 HPfHLHG~~F~Vl~~g~~------~---~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~ad 547 (613)
||||||||+|+||+++.. + .+. ... ......+|+|||||.||++||++|||+||
T Consensus 392 HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~----------------~~~-~~~~~~~p~~RDTv~V~pgg~v~IrF~aD 454 (534)
T 1zpu_A 392 HPFHLHGHAFQTIQRDRTYDDALGEVPHSFD----------------PDN-HPAFPEYPMRRDTLYVRPQSNFVIRFKAD 454 (534)
T ss_dssp EEEEETTCCEEEEEECCCCCGGGTCCCCCCB----------------TTB-CCCCCSSCEEESEEEECTTCEEEEEEECC
T ss_pred CCeEecCCceEEEeecCCccccccCcccccC----------------ccc-cccccCCCCeeeEEEeCCCCEEEEEEEeC
Confidence 999999999999999863 1 111 000 01225789999999999999999999999
Q ss_pred CcceeEEeechhhhhhcCceEEEEeccCCCC-----CCCCCC-CCCCCCCCCCCC
Q psy4302 548 NPGIWIMHCHFIFHTETGMNTVFQVGDRKDF-----VQTPPE-FPTCNNYLPPVD 596 (613)
Q Consensus 548 NPG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~-----~~~p~~-~p~C~~~~~~~~ 596 (613)
|||.|+|||||+||++.|||++|.+... ++ .++|++ .+.|..|..+..
T Consensus 455 NPG~W~~HCHi~~H~~~GM~~~~~~~~~-~~~~~~~~~~p~~~~~~C~~~~~~~~ 508 (534)
T 1zpu_A 455 NPGVWFFHCHIEWHLLQGLGLVLVEDPF-GIQDAHSQQLSENHLEVCQSCSVATE 508 (534)
T ss_dssp SCEEEEEEECCHHHHHTTCEEEEEECHH-HHHHCGGGSCCHHHHHHHHHTTCCCS
T ss_pred CCeeEEEEeCchhHhhcCCeEEEEECcc-ccccccccCCChhHhhhhhccCCCCC
Confidence 9999999999999999999999988642 22 234544 468999866554
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=6.5e-90 Score=764.95 Aligned_cols=457 Identities=29% Similarity=0.457 Sum_probs=348.1
Q ss_pred ecCCCe-EEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC----CceeEEeCCCcccCCCCCCCCCccccccCCCCCeE
Q psy4302 55 VTADGV-ERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD----RVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTY 129 (613)
Q Consensus 55 ~~~dG~-~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~----~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~ 129 (613)
+.+||+ ++.+|+|||++|||+|+|++||+|+|+|+|+|++ ++|+|||||+++.+++||||+|++|||||+||++|
T Consensus 35 ~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~ 114 (521)
T 1v10_A 35 LDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESF 114 (521)
T ss_dssp ECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEE
T ss_pred EcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeE
Confidence 678999 9999999999999999999999999999999973 79999999999999999999999999999999999
Q ss_pred EEEEe-ecCCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCCCCCCCCCC
Q psy4302 130 RYKFP-AMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTR 208 (613)
Q Consensus 130 ~Y~f~-~~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~ 208 (613)
+|+|+ ++++||||||||.+.|+++||+|+|||+++. ++....|+.|..|++|+|+||+++........ .....+.
T Consensus 115 ~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~--~~~~~~~ 190 (521)
T 1v10_A 115 VYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--DPHLSLYDVDDASTVITIADWYHSLSTVLFPN--PNKAPPA 190 (521)
T ss_dssp EEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSGGGEEEEEEECSSCCC---------CCCSC
T ss_pred EEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCc--ccccccCCCCCceeEEEEcccccCCHHHHhhc--cCCCCCC
Confidence 99999 5789999999999999999999999999874 34444577765689999999999877654321 1122356
Q ss_pred CcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEcc
Q psy4302 209 TESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFP 288 (613)
Q Consensus 209 ~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~p 288 (613)
++++||||++++.+.. ...+.+.++|++|++|||||||+|... .+.|+|+||+|+||++||.+++|+.+++|.|+|
T Consensus 191 ~d~~liNG~~~~~~~~---~~~~~~~~~v~~G~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~p 266 (521)
T 1v10_A 191 PDTTLINGLGRNSANP---SAGQLAVVSVQSGKRYRFRIVSTSCFP-NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFA 266 (521)
T ss_dssp CSEEEETTBCCCSSCG---GGSCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCEEEECCcccCCCCC---CCCCceEEEECCCCEEEEEEEecCCcc-cEEEEECCCeEEEEecCCccccceeeeeEEEcc
Confidence 8999999999865421 123458999999999999999999884 899999999999999999999999999999999
Q ss_pred ceeeeecccEEEEccCCccC-------c-C----CCCceeEEEEecccCCC-CCCCCCCCCCCCcccc--cCcCCCCCCc
Q psy4302 289 GQYTPVNSAIVLNINLDAAH-------M-G----SRRDRLNILRLRKSLNA-LDSSDCSDTNPNVCWN--HVNSLTPATE 353 (613)
Q Consensus 289 geR~~~~~dv~v~a~~~~~~-------~-~----~~~~~~ail~Y~~~~~~-~~~~~~~~~~~~~~~~--~l~~~~~~~~ 353 (613)
|||| ||+|+++++++. . . ......|+|+|.+.... +... .. ...+.. +|..+.+.+.
T Consensus 267 gqR~----dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~-~~---~~~~~~~~~l~p~~~~~~ 338 (521)
T 1v10_A 267 GQRY----SVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTS-QN---SGTALNEANLIPLINPGA 338 (521)
T ss_dssp TCEE----EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCC-CC---CSCBCCGGGCCBSSCCCC
T ss_pred cceE----EEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCC-CC---cccccchhhcccCCcccC
Confidence 9999 999999987552 1 1 11123699999974322 1111 00 112222 2322221111
Q ss_pred cccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCC
Q psy4302 354 KATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDR 433 (613)
Q Consensus 354 ~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~ 433 (613)
.........+.++.+.+.+ .+....|.|||++|..+..|+|.+... +. +
T Consensus 339 p~~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~iNg~~~~~~~~P~l~~~~~--g~-~----- 387 (521)
T 1v10_A 339 PGNPVPGGADINLNLRIGR-----------------------NATTADFTINGAPFIPPTVPVLLQILS--GV-T----- 387 (521)
T ss_dssp SSCSSTTCSSEEEECCEEC-----------------------CSSSSCCEESSCCCCCCSSCHHHHHHH--TC-C-----
T ss_pred CCcccCCcceEEEEEEEec-----------------------CCceeEEEECCCcccCCCCchhhhhhc--CC-c-----
Confidence 0000111233333222211 111236889999999888888766431 00 0
Q ss_pred CccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhc
Q psy4302 434 SVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAR 513 (613)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~ 513 (613)
.+ ..++.++.++.++.|++|||+++|. +.||||||||+|+||+++...
T Consensus 388 -~~-------~~~~~~~~~~~v~~g~~vei~l~N~------~~HP~HLHGh~F~Vl~~~~~~------------------ 435 (521)
T 1v10_A 388 -NP-------NDLLPGGAVISLPANQVIEISIPGG------GNHPFHLHGHNFDVVRTPGSS------------------ 435 (521)
T ss_dssp -CG-------GGSSSTTTEEEECTTCEEEEEEECC------BSCEEEESSCCEEEEECTTCS------------------
T ss_pred -cc-------ccCCCCceEEEecCCCEEEEEEcCC------CCCCEEEccceEEEEecCCCC------------------
Confidence 00 2233456789999999999999983 489999999999999997621
Q ss_pred cCCCCCCCCCCCCCccceEEc-CCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccCC--CCCCCCC-CCCCCC
Q psy4302 514 EGPDLATKIRPQPCVKDTVTI-PPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRK--DFVQTPP-EFPTCN 589 (613)
Q Consensus 514 ~~~~~~~~n~~~p~~kDTv~V-p~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~--~~~~~p~-~~p~C~ 589 (613)
.+|+.+|+|||||.| |++||++|||+|||||.|+|||||+||++.|||++|.|+..+ ++.++|+ ..+.|.
T Consensus 436 ------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~ 509 (521)
T 1v10_A 436 ------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCP 509 (521)
T ss_dssp ------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHH
T ss_pred ------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhhhch
Confidence 246789999999999 899999999999999999999999999999999999997543 2334554 578999
Q ss_pred CCCCCCC
Q psy4302 590 NYLPPVD 596 (613)
Q Consensus 590 ~~~~~~~ 596 (613)
+|.....
T Consensus 510 ~~~~~~~ 516 (521)
T 1v10_A 510 KYNANNP 516 (521)
T ss_dssp HHTTCC-
T ss_pred hhhccCC
Confidence 9976543
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2.1e-88 Score=750.18 Aligned_cols=451 Identities=29% Similarity=0.468 Sum_probs=347.4
Q ss_pred ecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC----CceeEEeCCCcccCCCCCCCCCccccccCCCCCeEE
Q psy4302 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD----RVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYR 130 (613)
Q Consensus 55 ~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~----~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~ 130 (613)
+.+||+++.+|+|||++ ||+|+|++||+|+|+|+|+|++ ++|+|||||+++++++||||+|++|||+|+||++|+
T Consensus 16 ~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~ 94 (503)
T 1hfu_A 16 VSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFL 94 (503)
T ss_dssp ECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEE
T ss_pred ECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEE
Confidence 67899999999999999 9999999999999999999973 799999999999988999999999999999999999
Q ss_pred EEEe-ecCCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCCCCCCCCCCC
Q psy4302 131 YKFP-AMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRT 209 (613)
Q Consensus 131 Y~f~-~~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~ 209 (613)
|+|+ ++++||||||||.+.|+++||+|+|||+++. ++....|+.|..|++|+|+||+++...... . .+.+
T Consensus 95 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~-~------~~~~ 165 (503)
T 1hfu_A 95 YKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN--DPHAALYDEDDENTIITLADWYHIPAPSIQ-G------AAQP 165 (503)
T ss_dssp EEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSTTSEEEEEEECSSCGGGCC----------CC
T ss_pred EEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC--CCcccCCCCCCceEEEEEcccccCChHHhc-C------CCCC
Confidence 9999 5789999999999999999999999999874 344445777656899999999998765421 1 1457
Q ss_pred cceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccc
Q psy4302 210 ESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPG 289 (613)
Q Consensus 210 ~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pg 289 (613)
+++||||++.+.+. ...+.+.++|++|++|||||||++... .+.|+|+||+|+||++||.+++|+.+++|.|+||
T Consensus 166 d~~liNG~~~~~~~----~~~~~~~~~v~~g~~~RlRliN~~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pg 240 (503)
T 1hfu_A 166 DATLINGKGRYVGG----PAAELSIVNVEQGKKYRMRLISLSCDP-NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTG 240 (503)
T ss_dssp SEEEETTBCCBTTC----CCCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECTT
T ss_pred CEEEECcccccCCC----CCCcceEEEEcCCCEEEEEEEecCCcc-cEEEEEcCceEEEEeccCccccccccCeEEEccc
Confidence 89999999986553 224568999999999999999999884 8999999999999999999999999999999999
Q ss_pred eeeeecccEEEEccCCccC-------c-C--------CCCceeEEEEecccCCCCCCCCCCCCCCCcccc--cCcCCCCC
Q psy4302 290 QYTPVNSAIVLNINLDAAH-------M-G--------SRRDRLNILRLRKSLNALDSSDCSDTNPNVCWN--HVNSLTPA 351 (613)
Q Consensus 290 eR~~~~~dv~v~a~~~~~~-------~-~--------~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~ 351 (613)
||| ||+|+++++++. . . ......|||+|.+........ ...+ ...++. +|..+.+.
T Consensus 241 eR~----dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~-~~~~l~~~~l~p~~~~ 314 (503)
T 1hfu_A 241 QRY----SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANP-NPAQLNEADLHALIDP 314 (503)
T ss_dssp CEE----EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCS-SCCBCCGGGCBBSSSC
T ss_pred ceE----EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCC-ccCCCccccccccCcc
Confidence 999 999999986552 1 1 111336999999743221111 1011 112222 23332211
Q ss_pred CccccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCC
Q psy4302 352 TEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPK 431 (613)
Q Consensus 352 ~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~ 431 (613)
+..........+..+.+.+.+ .+. .|.|||++|..+..|+|.+... +...
T Consensus 315 ~~p~~~~~~~~~~~~~l~~~~-----------------------~~~--~~~iNg~~~~~~~~P~l~~~~~--g~~~--- 364 (503)
T 1hfu_A 315 AAPGIPTPGAADVNLRFQLGF-----------------------SGG--RFTINGTAYESPSVPTLLQIMS--GAQS--- 364 (503)
T ss_dssp SCSSCSSTTCSSEEEECCEEE-----------------------ETT--EEEETTBCCCCCSSCHHHHHHT--TCCS---
T ss_pred CCCCcccCCcceEEEEEEeec-----------------------cCc--eEEECCCccCCCCCcchhhhhc--CCcc---
Confidence 100000111233333222211 011 6889999999888888766431 1000
Q ss_pred CCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhh
Q psy4302 432 DRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERL 511 (613)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~ 511 (613)
+ ..++.++.++.++.|++|||+++|. . ..+.||||||||+|+||+++...
T Consensus 365 ----~-------~~~~~~~~~~~v~~g~~vei~l~~n-~--~~~~HP~HLHGh~F~Vl~~~~~~---------------- 414 (503)
T 1hfu_A 365 ----A-------NDLLPAGSVYELPRNQVVELVVPAG-V--LGGPHPFHLHGHAFSVVRSAGSS---------------- 414 (503)
T ss_dssp ----G-------GGSSSTTSEEEECSSCEEEEEEECC-S--TTCCCEEEETTCCEEEEECTTCC----------------
T ss_pred ----c-------ccCCCCceEEEccCCCEEEEEEECC-C--CCCCCCEEEecceEEEEecCCCC----------------
Confidence 0 2334467789999999999999965 2 25699999999999999997621
Q ss_pred hccCCCCCCCCCCCCCccceEEc-CCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccCC--CCCCCCC-CCCC
Q psy4302 512 AREGPDLATKIRPQPCVKDTVTI-PPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRK--DFVQTPP-EFPT 587 (613)
Q Consensus 512 ~~~~~~~~~~n~~~p~~kDTv~V-p~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~--~~~~~p~-~~p~ 587 (613)
.+|+.+|+|||||.| |++||++|||+|||||.|+|||||+||++.|||++|.|+..+ ++.++|+ ..+.
T Consensus 415 --------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~ 486 (503)
T 1hfu_A 415 --------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQL 486 (503)
T ss_dssp --------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHH
T ss_pred --------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhh
Confidence 246788999999999 999999999999999999999999999999999999986432 3444564 4679
Q ss_pred CCCCCCC
Q psy4302 588 CNNYLPP 594 (613)
Q Consensus 588 C~~~~~~ 594 (613)
|+.|...
T Consensus 487 C~~~~~~ 493 (503)
T 1hfu_A 487 CEIYDDL 493 (503)
T ss_dssp HHHHHTC
T ss_pred ccchhhc
Confidence 9999665
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=9e-88 Score=753.21 Aligned_cols=471 Identities=25% Similarity=0.397 Sum_probs=345.4
Q ss_pred ecCCCeE-EeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCC-CCeEEEE
Q psy4302 55 VTADGVE-RPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIP-ETTYRYK 132 (613)
Q Consensus 55 ~~~dG~~-~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~p-G~~~~Y~ 132 (613)
+.+||++ +.+|+|||++|||+|+|++||+|+|+|+|+|+.++++|||||+++.+++||||+|++|||||+| |++|+|+
T Consensus 47 ~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~ 126 (559)
T 2q9o_A 47 MGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYR 126 (559)
T ss_dssp ECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEE
T ss_pred ECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEE
Confidence 7789999 9999999999999999999999999999999657999999999999899999999999999999 9999999
Q ss_pred EeecCCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCCCCCCCCCCCcce
Q psy4302 133 FPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESF 212 (613)
Q Consensus 133 f~~~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (613)
|+++++||||||||.+.|+++||+|+|||++++. ..||.| ..+|+|+||+++...+.+.... ......++++
T Consensus 127 f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-----~~~d~d--~~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~d~~ 198 (559)
T 2q9o_A 127 WRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS-----LPYDID--LGVFPITDYYYRAADDLVHFTQ-NNAPPFSDNV 198 (559)
T ss_dssp EECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS-----SCCSEE--EEEEEEEEECSSCHHHHHHHHT-TSCCCCBSEE
T ss_pred EECCCCEEEEEEEcccchhcCCceEEEEecCCCc-----CCCccc--ceEEEEeccccCCHHHHhhhhh-cCCCCcccee
Confidence 9999999999999999999999999999998743 234443 2399999999987654332111 1224568899
Q ss_pred eecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccceee
Q psy4302 213 LINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYT 292 (613)
Q Consensus 213 lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~ 292 (613)
||||+..+.+. .....+.++|++|++|||||||+|... .+.|+|+||+|+||++||.+++|+.+++|.|+|||||
T Consensus 199 liNG~~~~~~~----~~g~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 199 LINGTAVNPNT----GEGQYANVTLTPGKRHRLRILNTSTEN-HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp EETTBCBCTTT----CCBCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEE
T ss_pred EECCccccCcC----CCCCceEEEEcCCCEEEEEEEecCCCc-eEEEEECCCceEEEecCCcccCceEeCeEEEccEEEE
Confidence 99999975321 223467899999999999999999884 8999999999999999999999999999999999999
Q ss_pred eecccEEEEccCCccC------c--------CCCCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCcccc--
Q psy4302 293 PVNSAIVLNINLDAAH------M--------GSRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKAT-- 356 (613)
Q Consensus 293 ~~~~dv~v~a~~~~~~------~--------~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-- 356 (613)
||+|+++++++. . .......|||+|.+.................|.++ ..+.+......
T Consensus 274 ----dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~-~~l~p~~~~~~p~ 348 (559)
T 2q9o_A 274 ----DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDT-LDVRPVVPRSVPV 348 (559)
T ss_dssp ----EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCC-SCCCBSSCCBCCC
T ss_pred ----EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccc-cccccCCCCCCCC
Confidence 999999986552 1 11234589999987432211110100011123332 22332211100
Q ss_pred -ccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCC-CCCcccccCCCCCCCCCCCCCC
Q psy4302 357 -VLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGIL-PFPILSQDLPIPKEMECPKDRS 434 (613)
Q Consensus 357 -~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p-~~P~l~~~~~~~~~~~~~~~~~ 434 (613)
......+.++. +.... .......|.|||++|..+ ..|+|.+... +.
T Consensus 349 ~~~~~~~~~~~~--~~~~~--------------------~~~~~~~~~iNg~s~~~~~~~P~L~~~~~--g~-------- 396 (559)
T 2q9o_A 349 NSFVKRPDNTLP--VALDL--------------------TGTPLFVWKVNGSDINVDWGKPIIDYILT--GN-------- 396 (559)
T ss_dssp TTCCCCGGGEEE--EEEEC--------------------SSSSSCEEEETTBCCCCCTTSCHHHHHHH--TC--------
T ss_pred cccccceeEEEE--EEeec--------------------CCCceEEEEECCEecccCCCCCcHhHhhc--CC--------
Confidence 00011122222 22110 012345799999999754 5787655421 00
Q ss_pred ccCCccccCCccceeeEEEEecC-CCEEEEEEEeCCCC-CCCCCCCeeeecCcEEEEEeccC--------CCcccccccc
Q psy4302 435 VCGKSAEKGGKLCECVEIIKVGL-NQVAEIIFIDWIGP-TSTFLHPMHLHGTDIYIIEQGII--------PVAEDHRAFV 504 (613)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~v~~-g~~ve~vl~N~~~~-~~~~~HPfHLHG~~F~Vl~~g~~--------~~~~~~~~~~ 504 (613)
..+..+.+++.++. +++++|++.|. .. ...+.||||||||+|+||+++.. +.++
T Consensus 397 ---------~~~~~~~~~~~~~~~~~v~~~vi~n~-~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~------ 460 (559)
T 2q9o_A 397 ---------TSYPVSDNIVQVDAVDQWTYWLIEND-PEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFD------ 460 (559)
T ss_dssp ---------CCCCGGGCEEEECCSSCEEEEEEEEC-TTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCC------
T ss_pred ---------ccCCCCceEEEcCCCCEEEEEEEeCC-CccccCCCCcEEECCCceEEEecccccccccccccccC------
Confidence 11223456788875 56777777776 21 01469999999999999999862 1111
Q ss_pred cchHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccC--CCCCCC-
Q psy4302 505 GKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDR--KDFVQT- 581 (613)
Q Consensus 505 ~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~--~~~~~~- 581 (613)
... +...+|+.+|+|||||.||++||++|||+|||||.|+|||||+||++.|||++|.|+.. .++.++
T Consensus 461 ~~~---------~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~~ 531 (559)
T 2q9o_A 461 PAV---------DLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQE 531 (559)
T ss_dssp HHH---------HGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHH
T ss_pred ccc---------cccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchhhhccccC
Confidence 000 11246789999999999999999999999999999999999999999999999988632 233333
Q ss_pred -CC-CCCCCCCCCCCCCCCCC
Q psy4302 582 -PP-EFPTCNNYLPPVDPNEF 600 (613)
Q Consensus 582 -p~-~~p~C~~~~~~~~~~~~ 600 (613)
|+ .++.|++|........+
T Consensus 532 ~p~~~~~~C~~~~~~~~~~~~ 552 (559)
T 2q9o_A 532 DEDDFNRVCDEWRAYWPTNPY 552 (559)
T ss_dssp HHHHHHHHHHHHHHHGGGCSS
T ss_pred CchhhhhhccccccccccCCC
Confidence 44 45799999776554433
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=6.9e-78 Score=656.05 Aligned_cols=391 Identities=23% Similarity=0.337 Sum_probs=302.5
Q ss_pred CceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCcee
Q psy4302 19 PMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVT 98 (613)
Q Consensus 19 ~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~t 98 (613)
+...+|+|++.... +..||+++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++++
T Consensus 14 ~~~~~~~l~~~~~~----------------------~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~ts 70 (439)
T 2xu9_A 14 GGLLSLKLSATPTP----------------------LAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLP-EPTN 70 (439)
T ss_dssp TTEEEEEEEEEEEE----------------------EEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSS-SCBC
T ss_pred CCeEEEEEEEEEEE----------------------EEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCC-CCcc
Confidence 35567888877643 456899999999999999999999999999999999998 8999
Q ss_pred EEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeec--CCCceEEeecC----cccccCCceeeEEEeCCCCCCCCCC
Q psy4302 99 IHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAM--PYGTFFYHSHI----GFQKMDGLEGPLVIRRPKKADPNRD 172 (613)
Q Consensus 99 iHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~--~~GT~wyH~H~----~~q~~~Gl~G~liV~~~~~~~p~~~ 172 (613)
|||||+++. +++||++ + +|+||++|+|+|+++ ++||||||||. +.|+.+||+|+|||+++.+..+.
T Consensus 71 iHwHG~~~~--~~~DG~~-~---~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~-- 142 (439)
T 2xu9_A 71 LHWHGLPIS--PKVDDPF-L---EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPE-- 142 (439)
T ss_dssp CEEETCCCC--TTTSCTT-C---CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHH--
T ss_pred eEeCCCCCC--ccccCCc-c---cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCcc--
Confidence 999999986 4899986 3 599999999999974 79999999997 57999999999999987432121
Q ss_pred CCCCCCCceEEEEeeeccCCCCcccCCCC--CCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEec
Q psy4302 173 QYDTDYPSHTIIITDWLHGMTDAKFPGNT--YANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGG 250 (613)
Q Consensus 173 ~~d~d~~e~~l~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~ 250 (613)
...+ .|++|+++||+++.. . ..... ....+..++.++|||+.. |.++|++| +|||||||+
T Consensus 143 -~~~~-~e~~l~l~D~~~~~~-~-~~~~~~~~~~~g~~~~~~~iNG~~~-------------p~l~v~~g-~~RlRliN~ 204 (439)
T 2xu9_A 143 -LREA-EEHLLVLKDLALQGG-R-PAPHTPMDWMNGKEGDLVLVNGALR-------------PTLVAQKA-TLRLRLLNA 204 (439)
T ss_dssp -HHTS-EEEEEEEEEECEETT-E-ECCCCHHHHHHCCCCSEEEETTEES-------------CEEECSSS-EEEEEEEEC
T ss_pred -CCCC-CcEEEEEEeeeeCCC-C-cCCCCccccccCCCCCEEEECCccC-------------CcEEecCC-eEEEEEEec
Confidence 1122 379999999998764 1 11100 011234578999999987 89999999 999999999
Q ss_pred CCCCCcEEEEEeceeeEEEEeCCccc-ceeeeeEEEEccceeeeecccEEEEccCCccC-------c-C-C---------
Q psy4302 251 SCLACPMLFFVEKHRMNLITVDGTPV-QPQMFDSITIFPGQYTPVNSAIVLNINLDAAH-------M-G-S--------- 311 (613)
Q Consensus 251 ~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-------~-~-~--------- 311 (613)
|.. +.+.|+|+||+|+||++||.++ +|+.+++|.|+||||| ||+|++++++.. . . .
T Consensus 205 ~~~-~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~----dv~v~~~~~G~~~l~~~~~~~~~~~~~~~~~~~ 279 (439)
T 2xu9_A 205 SNA-RYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERA----EVLVRLRKEGRFLLQALPYDRGAMGMMDMGGMA 279 (439)
T ss_dssp CSS-CCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEE----EEEEECCSSEEEEEEEECCCCCCEEEECSSSCC
T ss_pred CCC-ceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeE----EEEEEcCCCceEEEEecccccCCcccccccccc
Confidence 987 4899999999999999999998 7999999999999999 999999985541 0 0 0
Q ss_pred --------CCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCCCceEEEEEEeeeeeccCccccC
Q psy4302 312 --------RRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWN 383 (613)
Q Consensus 312 --------~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~ 383 (613)
.....++|+|.+...+ . ..+ ..+..+.+.+. ...++++.+.+.. .
T Consensus 280 ~~~~~~~~~~~~~~~l~~~~~~~~---~--~~p------~~l~~~~~l~~------~~~~r~~~l~~~~---~------- 332 (439)
T 2xu9_A 280 HAMPQGPSRPETLLYLIAPKNPKP---L--PLP------KALSPFPTLPA------PVVTRRLVLTEDM---M------- 332 (439)
T ss_dssp EEEECCSCCCEEEEEEEECSSCCC---C--CCC------SCCCCCCCCCC------CSEEEEEEEEEEG---G-------
T ss_pred ccccCCCCCcceeEEEEecCCCcc---c--cCc------ccCCCcccCCC------CCcceEEEEEeec---c-------
Confidence 1235678888753211 0 001 01111111110 1112333333221 0
Q ss_pred CcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEecCCCEEEE
Q psy4302 384 DEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEI 463 (613)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~ 463 (613)
...|.|||++|..+. ..+.++.|++++|
T Consensus 333 ---------------g~~~~iNg~~~~~~~-------------------------------------~~~~~~~g~~~~~ 360 (439)
T 2xu9_A 333 ---------------AARFFINGQVFDHRR-------------------------------------VDLKGQAQTVEVW 360 (439)
T ss_dssp ---------------GTEEEETTBCCCTTC-------------------------------------CCEEECTTCEEEE
T ss_pred ---------------CceEeECCEECCCCC-------------------------------------CceecCCCCEEEE
Confidence 015789999885321 1257889999999
Q ss_pred EEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEE
Q psy4302 464 IFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVR 543 (613)
Q Consensus 464 vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIr 543 (613)
+|+|. + .+.||||||||+|+||++++. ++.+|+|||||.||++||++||
T Consensus 361 ~~~N~-~---~~~HP~HLHG~~F~Vl~~~g~---------------------------~~~~p~~rDTv~v~p~~~v~i~ 409 (439)
T 2xu9_A 361 EVENQ-G---DMDHPFHLHVHPFQVLSVGGR---------------------------PFPYRAWKDVVNLKAGEVARLL 409 (439)
T ss_dssp EEEEC-S---SSCEEEEESSCCBEEEEETTE---------------------------ECSSCCCBSEEEECTTCEEEEE
T ss_pred EEEcC-C---CCCCCceeCCCcEEEEeeCCC---------------------------CCCCCCCeEEEEeCCCCEEEEE
Confidence 99998 4 469999999999999998751 1246899999999999999999
Q ss_pred EEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 544 VHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 544 f~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
|++||||.|+|||||+||++.|||++|+|+
T Consensus 410 f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 410 VPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999999999999999999999999999985
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=4.8e-76 Score=653.55 Aligned_cols=429 Identities=19% Similarity=0.258 Sum_probs=315.2
Q ss_pred eEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEE
Q psy4302 21 VCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIH 100 (613)
Q Consensus 21 ~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiH 100 (613)
+.+|+|++.... ..+.+||+++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++++||
T Consensus 36 ~~~~~l~~~~~~--------------------~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~-~~tsiH 94 (534)
T 3abg_A 36 IWYYEVEIKPFT--------------------HQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAE-APNSVH 94 (534)
T ss_dssp CEEEEEEEECCE--------------------ECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSS-SCBCEE
T ss_pred eEEEEEEEEEEE--------------------EEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCC-CCceEE
Confidence 467888888543 23678899999999999999999999999999999999998 899999
Q ss_pred eCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC-CCceEEeecCc----ccccCCceeeEEEeCCCCCCCC-CCCC
Q psy4302 101 WHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP-YGTFFYHSHIG----FQKMDGLEGPLVIRRPKKADPN-RDQY 174 (613)
Q Consensus 101 wHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~-~GT~wyH~H~~----~q~~~Gl~G~liV~~~~~~~p~-~~~~ 174 (613)
|||++++. +|||++ ||+|+||++|+|+|++.+ +||||||||.. .|+++||+|+|||+++.+.... ...|
T Consensus 95 wHGl~~~~--~~DG~~---~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~ 169 (534)
T 3abg_A 95 LHGSFSRA--AFDGWA---EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGY 169 (534)
T ss_dssp EETCCCCT--TTTTCS---SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCH
T ss_pred ECCCcCCC--CCCCCC---CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccC
Confidence 99999875 699974 899999999999999986 78999999985 4788999999999988543211 1111
Q ss_pred -CCCCCceEEEEeeeccCCCCcccCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCC
Q psy4302 175 -DTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCL 253 (613)
Q Consensus 175 -d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 253 (613)
++ |++|+|+||++......+... ....+..++.+||||+.+ +.+.|++ ++|||||||+|..
T Consensus 170 ~~~---d~~l~l~d~~~~~~g~~~~~~-~~~~~~~gd~~lvNG~~~-------------p~~~v~~-~~~RlRliNa~~~ 231 (534)
T 3abg_A 170 GEF---DIPMILTSKQYTANGNLVTTN-GELNSFWGDVIHVNGQPW-------------PFKNVEP-RKYRFRFLDAAVS 231 (534)
T ss_dssp HHH---SCCEEEEEECBCSSSCBCCCT-TCSSCCCCSEEEETTEES-------------CBCBCCS-SEEEEEEEECCSS
T ss_pred Ccc---eEEEEEeeeeecCCCceeccC-CCCccccCceeccCCccC-------------ceEEecC-cEEEEEEEecCCc
Confidence 23 478999999987665543221 122345678999999987 7888988 5999999999988
Q ss_pred CCcEEEEEec-------eeeEEEEeCCcc-cceeeeeEEEEccceeeeecccEEEEccCCccC-----c-C---------
Q psy4302 254 ACPMLFFVEK-------HRMNLITVDGTP-VQPQMFDSITIFPGQYTPVNSAIVLNINLDAAH-----M-G--------- 310 (613)
Q Consensus 254 ~~~~~~~i~g-------h~~~via~DG~~-v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-----~-~--------- 310 (613)
+.+.|+|++ |+|+||++||++ .+|+.+++|.|+||||| ||+|++++..+. . .
T Consensus 232 -~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~----dvlv~~~~~~g~~~~l~~~~~~~~~~~~~ 306 (534)
T 3abg_A 232 -RSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERY----EVVFDFSDYAGKTIELRNLGGSIGGIGTD 306 (534)
T ss_dssp -CCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEE----EEEEECSSCTTSEEEEECCCCSSSSCCSC
T ss_pred -ceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEE----EEEEEcCCCCCceEEEEeccccccccccc
Confidence 489999987 999999999985 57999999999999999 999999985441 1 0
Q ss_pred -CCCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCCCceEEEEEEeeeeeccCccccCCcccce
Q psy4302 311 -SRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYH 389 (613)
Q Consensus 311 -~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~ 389 (613)
......+|++|.....+ . +.... .....|..+. .+ ......++++ .+..
T Consensus 307 ~~~~~~~~il~~~~~~~~---~-~~~~~--~~P~~L~~~~-~p----~~~~~~~~~~--~~~~----------------- 356 (534)
T 3abg_A 307 TDYDNTDKVMRFVVADDT---T-QPDTS--VVPANLRDVP-FP----SPTTNTPRQF--RFGR----------------- 356 (534)
T ss_dssp SSSTTTSEEEEEECCCCS---S-CSCCC--CCCCCCCCCS-CC----CCCCCCCEEE--ECSC-----------------
T ss_pred cCcCCcceeEEEecCCCC---c-CCCCC--CCccccccCC-CC----CCccccceEE--EEec-----------------
Confidence 01134589998743221 0 11000 0011122211 00 1111122222 1110
Q ss_pred eeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCC
Q psy4302 390 RWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWI 469 (613)
Q Consensus 390 ~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~ 469 (613)
. ...|.|||++|..+..|++ +.++.|++++|+|+|.
T Consensus 357 ------~--~~~w~iNG~~f~~~~~p~l-----------------------------------~~v~~G~~~~w~i~N~- 392 (534)
T 3abg_A 357 ------T--GPTWTINGVAFADVQNRLL-----------------------------------ANVPVGTVERWELINA- 392 (534)
T ss_dssp ------C--CSTTCCCCBTTBCTTSCCC-----------------------------------CEECTTCEEEEEEEEC-
T ss_pred ------c--CceeEECCcccCCCCCcce-----------------------------------eeccCCCEEEEEEEcC-
Confidence 0 1247899999865443332 3567899999999998
Q ss_pred CCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEE-ecC
Q psy4302 470 GPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVH-FNN 548 (613)
Q Consensus 470 ~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~-adN 548 (613)
+ ..+.||||||||+|+||+++.. .+. ....++.+ .|||||.|+++++++|||+ +||
T Consensus 393 ~--~~~~HP~HLHG~~F~Vl~~~~g-~~~-------------------~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adn 449 (534)
T 3abg_A 393 G--NGWTHPIHIHLVDFKVISRTSG-NNA-------------------RTVMPYES-GLKDVVWLGRRETVVVEAHYAPF 449 (534)
T ss_dssp S--SSCCCCEEESSCCEEEEEESSC-CSS-------------------SCCCSGGG-SCBSEECCCSSEEEEEEEECCSC
T ss_pred C--CCCCcCEEECCeeEEEEEEcCC-CCc-------------------CcCCcccc-CCcCeEEcCCCCEEEEEEEECCC
Confidence 4 2358999999999999999542 110 00134455 8999999999999999999 899
Q ss_pred cceeEEeechhhhhhcCceEEEEeccCCCCCCCCCCC--CCCCCCCCCC
Q psy4302 549 PGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPPEF--PTCNNYLPPV 595 (613)
Q Consensus 549 PG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~p~~~--p~C~~~~~~~ 595 (613)
||.|+|||||++|++.|||+.|.|...+++......+ |.|..|+...
T Consensus 450 pG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~~~p~~~~w~~~~ 498 (534)
T 3abg_A 450 PGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQARP 498 (534)
T ss_dssp CEEEEEEESCHHHHHTTCEEEEEECSSCCSSTTTTSCSSSSSCCCSSCC
T ss_pred CccEEEecChHHHHhcCCceEEEEEeccccCCCCcccCCCCCccccccc
Confidence 9999999999999999999999998655321111222 4566776554
No 11
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.4e-76 Score=646.84 Aligned_cols=377 Identities=16% Similarity=0.171 Sum_probs=294.9
Q ss_pred CCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC
Q psy4302 58 DGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP 137 (613)
Q Consensus 58 dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~ 137 (613)
||+++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++++|||||+++.++ |||+| ||+|+||++|+|+|++++
T Consensus 34 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~~--~DG~~---~~~i~PG~~~~Y~f~~~~ 107 (451)
T 2uxt_A 34 PGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLT-ENVSMTVAGLQVPGP--LMGGP---ARMMSPNADWAPVLPIRQ 107 (451)
T ss_dssp SSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCGG--GSCSG---GGCBCTTCEECCEEECCS
T ss_pred CCceeEEEEECCcccCceEEEeCCCEEEEEEEECCC-CCccEEECCccCCCC--CCCCC---cCcCCCCCeEEEEEEcCC
Confidence 789999999999999999999999999999999998 899999999999865 99998 899999999999999986
Q ss_pred -CCceEEeecC----cccccCCceeeEEEeCCCCCCC-CCCCCCCCCCceEEEEeeeccCCCCcccCCCCCCCCCCCCcc
Q psy4302 138 -YGTFFYHSHI----GFQKMDGLEGPLVIRRPKKADP-NRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTES 211 (613)
Q Consensus 138 -~GT~wyH~H~----~~q~~~Gl~G~liV~~~~~~~p-~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 211 (613)
+||||||||. +.|+++||+|+|||+++.+... ....| +..|++|+|+||+++......... ....+..+++
T Consensus 108 ~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y--~~~e~~l~l~D~~~~~~~~~~~~~-~~~~~~~~d~ 184 (451)
T 2uxt_A 108 NAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHY--GVDDFPVIIQDKRLDNFGTPEYNE-PGSGGFVGDT 184 (451)
T ss_dssp CSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCB--TTTEEEEEEEEEEECTTSCEECCC-CSSSCCCCSE
T ss_pred CCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccC--CCceEEEEEEeeecCCCCceeccc-ccCCCCcCCE
Confidence 9999999998 7899999999999998743211 11223 233899999999998765543221 2334567899
Q ss_pred eeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEE-eceeeEEEEeCCccc-ceeeeeEEEEccc
Q psy4302 212 FLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFV-EKHRMNLITVDGTPV-QPQMFDSITIFPG 289 (613)
Q Consensus 212 ~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i-~gh~~~via~DG~~v-~P~~~d~l~l~pg 289 (613)
+||||+.. |.++|++| +|||||||+|.. +.+.|+| |||+|+||++||.++ +|+.++++.|+||
T Consensus 185 ~liNG~~~-------------p~~~v~~g-~~RlRliNa~~~-~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pg 249 (451)
T 2uxt_A 185 LLVNGVQS-------------PYVEVSRG-WVRLRLLNASNS-RRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPG 249 (451)
T ss_dssp EEETTEES-------------CEEEECSS-EEEEEEEECCSS-CCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTT
T ss_pred EEECCccc-------------ceEEecCC-EEEEEEEccCCc-eeEEEEECCCCeEEEEEeCCCccCCceEeceEEECce
Confidence 99999998 89999999 999999999988 5899999 899999999999998 7999999999999
Q ss_pred eeeeecccEEEEccCCccC-----c-C-------------CCCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCC
Q psy4302 290 QYTPVNSAIVLNINLDAAH-----M-G-------------SRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTP 350 (613)
Q Consensus 290 eR~~~~~dv~v~a~~~~~~-----~-~-------------~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 350 (613)
||| ||+|++++++.. . . ......+|++|.......... ...+ ..|..+.+
T Consensus 250 eR~----dvlv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~-~~~p------~~L~~~~~ 318 (451)
T 2uxt_A 250 ERR----EILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVT-DSLP------MRLLPTEI 318 (451)
T ss_dssp CEE----EEEEECTTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC------SCSSSSCC
T ss_pred eEE----EEEEEeCCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCcc-ccCc------cccCCCCC
Confidence 999 999999975331 0 0 112335788887522111000 0000 11222111
Q ss_pred CCccccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCC
Q psy4302 351 ATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECP 430 (613)
Q Consensus 351 ~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~ 430 (613)
. . ..++.+..+.++ . .|.|||++|..+.
T Consensus 319 ~-----~--~~~~~~~~~~l~------------------------~----~~~iNg~~f~~~~----------------- 346 (451)
T 2uxt_A 319 M-----A--GSPIRSRDISLG------------------------D----DPGINGQLWDVNR----------------- 346 (451)
T ss_dssp C-----C--CCCSEEEEEEEC------------------------S----SSSBTTBCCCTTC-----------------
T ss_pred C-----C--CCCcceEEEEEe------------------------e----EEEECCEeCCCCC-----------------
Confidence 0 1 112222222211 0 3679999885321
Q ss_pred CCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHh
Q psy4302 431 KDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQER 510 (613)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~ 510 (613)
..+.++.|++|+|+|+|. +.||||||||+|+||++++..
T Consensus 347 --------------------~~~~~~~G~~~~~~l~N~------~~HP~HLHGh~F~Vl~~~G~~--------------- 385 (451)
T 2uxt_A 347 --------------------IDVTAQQGTWERWTVRAD------EPQAFHIEGVMFQIRNVNGAM--------------- 385 (451)
T ss_dssp --------------------CCEEEETTCEEEEEEEEE------EEEEEEETTCEEEEEEETTBC---------------
T ss_pred --------------------CcEEcCCCCEEEEEEECC------CCcCeEECCceEEEEeeCCcC---------------
Confidence 125788999999999997 379999999999999996421
Q ss_pred hhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEEecCcce----eEEeechhhhhhcCceEEEEecc
Q psy4302 511 LAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGI----WIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 511 ~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~adNPG~----Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
.++.+|.|||||.| +++++|+|+|||||. |+|||||++|++.|||++|+|..
T Consensus 386 ----------~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~ 441 (451)
T 2uxt_A 386 ----------PFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNP 441 (451)
T ss_dssp ----------CCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEEC
T ss_pred ----------CCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEcc
Confidence 23467899999999 899999999999988 99999999999999999999974
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.5e-75 Score=648.84 Aligned_cols=414 Identities=18% Similarity=0.212 Sum_probs=297.1
Q ss_pred ecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC---------------------CceeEEeCCCcccCCCCCC
Q psy4302 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD---------------------RVVTIHWHGVYQRHTPHSD 113 (613)
Q Consensus 55 ~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~---------------------~~~tiHwHGl~~~~~~~~D 113 (613)
+.+++.++.+|+|||++|||+|+|++||+|+|+|+|+|+. .+|+|||||+++. ++||
T Consensus 39 ~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~D 116 (513)
T 2wsd_A 39 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSD 116 (513)
T ss_dssp SSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGS
T ss_pred eCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccC
Confidence 4556778999999999999999999999999999999973 1899999999986 5799
Q ss_pred CCCc--cccccCCCCCeE---EEEEeec-CCCceEEeecCc----ccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEE
Q psy4302 114 GVPL--LTQCPIIPETTY---RYKFPAM-PYGTFFYHSHIG----FQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTI 183 (613)
Q Consensus 114 Gv~~--vtq~pI~pG~~~---~Y~f~~~-~~GT~wyH~H~~----~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l 183 (613)
|+|+ ++||+|+||++| +|+|++. ++||||||||.. .|+++||+|+|||+++.+.......+++ |++|
T Consensus 117 G~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~---d~~l 193 (513)
T 2wsd_A 117 GYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEY---DVPL 193 (513)
T ss_dssp CCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGG---EEEE
T ss_pred CCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCC---cEEE
Confidence 9996 799999999555 9999986 699999999984 4899999999999987432211112232 6999
Q ss_pred EEeeeccCCCCcccCCCC-----------CCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCC
Q psy4302 184 IITDWLHGMTDAKFPGNT-----------YANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSC 252 (613)
Q Consensus 184 ~l~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 252 (613)
+|+||+++.....+.... ....+..++++||||+.+ +.+.|++| +|||||||+|.
T Consensus 194 ~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~-------------p~~~v~~~-~~RlRliNa~~ 259 (513)
T 2wsd_A 194 LITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW-------------PYLEVEPR-KYRFRVINASN 259 (513)
T ss_dssp EEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES-------------CEEECCSS-EEEEEEEECCS
T ss_pred EEEeeecCCCCceecccccccccccccccccccccccceEEECCccc-------------ceEEecCC-EEEEEEEccCC
Confidence 999999876654332210 011235679999999998 78999885 89999999998
Q ss_pred CCCcEEEEEece-eeEEEEeCCccc-ceeeeeEEEEccceeeeecccEEEEccCCccC------cC------CCCceeEE
Q psy4302 253 LACPMLFFVEKH-RMNLITVDGTPV-QPQMFDSITIFPGQYTPVNSAIVLNINLDAAH------MG------SRRDRLNI 318 (613)
Q Consensus 253 ~~~~~~~~i~gh-~~~via~DG~~v-~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~------~~------~~~~~~ai 318 (613)
. +.+.|+|+|| +|+||++||.++ +|+.+++|.|+||||| ||+|++++..+. .. ......+|
T Consensus 260 ~-~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~----dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~i 334 (513)
T 2wsd_A 260 T-RTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERY----DIIIDFTAYEGESIILANSAGCGGDVNPETDANI 334 (513)
T ss_dssp S-CCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEE----EEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEE
T ss_pred c-ceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeE----EEEEECCCCCCcEEEEEecccccccCCCCCCcce
Confidence 7 5899999999 999999999998 6999999999999999 999999986552 10 01234688
Q ss_pred EEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCc
Q psy4302 319 LRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNV 398 (613)
Q Consensus 319 l~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (613)
++|....... .. .... . ...|..+...+ ...++....+.++.... ..+
T Consensus 335 l~~~~~~~~~-~~---~~~~-~-p~~l~~~~~~~------~~~~~~~~~~~l~~~~~--------------------~~g 382 (513)
T 2wsd_A 335 MQFRVTKPLA-QK---DESR-K-PKYLASYPSVQ------HERIQNIRTLKLAGTQD--------------------EYG 382 (513)
T ss_dssp EEEECCSCCS-SC---CCCC-C-CSBCSCCGGGC------CCCEEEEEEEEEEEEEC--------------------TTS
T ss_pred EEEEeccCcc-cC---ccCC-C-CccccCCCCcc------cCCCcceEEEEEEeecC--------------------CCC
Confidence 9998522110 00 0000 0 00111111100 01112222222222100 112
Q ss_pred eeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCC
Q psy4302 399 IKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHP 478 (613)
Q Consensus 399 ~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HP 478 (613)
...|.|||++|..|. .+.++.|++|+|+|+|. + .+.||
T Consensus 383 ~~~~~iNg~~~~~~~--------------------------------------~~~~~~g~~~~w~l~N~-~---~~~HP 420 (513)
T 2wsd_A 383 RPVLLLNNKRWHDPV--------------------------------------TETPKVGTTEIWSIINP-T---RGTHP 420 (513)
T ss_dssp CEEEEETTBCTTSCC--------------------------------------CBCCBTTCEEEEEEEEC-S---SSCEE
T ss_pred CceEeECCccCCCcc--------------------------------------cEecCCCCEEEEEEEcC-C---CCCcC
Confidence 235779998874220 13567899999999998 4 46999
Q ss_pred eeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCC-CCCCCCCCCccceEEcCCCcEEEEEEEe-cCcceeEEee
Q psy4302 479 MHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDL-ATKIRPQPCVKDTVTIPPNGYTVVRVHF-NNPGIWIMHC 556 (613)
Q Consensus 479 fHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~~p~~kDTv~Vp~~g~~vIrf~a-dNPG~Wl~HC 556 (613)
||||||+|+||+++... .. ..+...+....+. ......++.|||||.|+++++++|+|++ ||||.|+|||
T Consensus 421 ~HlHG~~F~Vl~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HC 492 (513)
T 2wsd_A 421 IHLHLVSFRVLDRRPFD-IA-------RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHC 492 (513)
T ss_dssp EEESSCCEEEEEEEEBC-HH-------HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEE
T ss_pred EeEeCceEEEEEecCcc-cc-------cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEc
Confidence 99999999999997521 00 0000000000000 0011224569999999999999999999 8999999999
Q ss_pred chhhhhhcCceEEEEecc
Q psy4302 557 HFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 557 Hi~~H~~~GM~~~~~V~~ 574 (613)
||+||++.|||+.|+|..
T Consensus 493 Hil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 493 HALEHEDYDMMRPMDITD 510 (513)
T ss_dssp SCHHHHTTTCEEEEEEBC
T ss_pred CChhhhhcCCceeEEEeC
Confidence 999999999999999964
No 13
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=7.7e-75 Score=658.98 Aligned_cols=441 Identities=15% Similarity=0.162 Sum_probs=290.2
Q ss_pred ecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC----------------------------------------
Q psy4302 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD---------------------------------------- 94 (613)
Q Consensus 55 ~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~---------------------------------------- 94 (613)
+.+|+....+|+|||++|||+|+|++||+|+|+|+|+|+.
T Consensus 46 ~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (612)
T 3gyr_A 46 LHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALP 125 (612)
T ss_dssp SCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCC
T ss_pred ecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCC
Confidence 5677778899999999999999999999999999999962
Q ss_pred CceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC-CCceEEeecC----cccccCCceeeEEEeCCCCCCC
Q psy4302 95 RVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP-YGTFFYHSHI----GFQKMDGLEGPLVIRRPKKADP 169 (613)
Q Consensus 95 ~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~-~GT~wyH~H~----~~q~~~Gl~G~liV~~~~~~~p 169 (613)
..|+|||||+++. ++|||+| ||+|+||++|+|+|++++ +||||||||. +.|+++||+|+|||+++.+...
T Consensus 126 ~~ttiHwHGl~~~--~~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~ 200 (612)
T 3gyr_A 126 AWSVTHLHGAQTG--GGNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDAL 200 (612)
T ss_dssp CCBCEEEETCCCC--TTTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTT
T ss_pred CCceEEcCCCccC--CcccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCcccccc
Confidence 2378999999885 5799875 999999999999999986 6899999996 6899999999999998754332
Q ss_pred CCCCCCCCCCceEEEEeeeccCCCCcccCCC-----------------CCCCCCCCCcceeecCcccccCCCCCCCCCcc
Q psy4302 170 NRDQYDTDYPSHTIIITDWLHGMTDAKFPGN-----------------TYANFGTRTESFLINGRSVFKSGNGTSNPVPY 232 (613)
Q Consensus 170 ~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~ 232 (613)
... ..| .|++|+|+||+++......... .....+..++.++|||+.+
T Consensus 201 ~~p--~~d-~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~------------- 264 (612)
T 3gyr_A 201 GLP--SGD-REIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW------------- 264 (612)
T ss_dssp TCC--CGG-GEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-------------
T ss_pred CCC--CCC-ccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc-------------
Confidence 222 223 2799999999886543322110 0011235678899999988
Q ss_pred ceEEEeCCcEEEEEEEecCCCCCcEEEEEece-------eeEEEEeCCcccc-eeee------eEEEEccceeeeecccE
Q psy4302 233 SKFKVNKGLRHRFRIIGGSCLACPMLFFVEKH-------RMNLITVDGTPVQ-PQMF------DSITIFPGQYTPVNSAI 298 (613)
Q Consensus 233 ~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh-------~~~via~DG~~v~-P~~~------d~l~l~pgeR~~~~~dv 298 (613)
+.+.|+. ++|||||||+++. +.+.|+|++| +|+|||+||.+++ |+.+ ++|.|+||||| ||
T Consensus 265 p~~~v~~-~~yRlRliNas~~-~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRy----dV 338 (612)
T 3gyr_A 265 PYADVDD-GWYRLRLVNASNA-RIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERF----DL 338 (612)
T ss_dssp CEEEEES-SEEEEEEEECCSS-CCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEE----EE
T ss_pred ceEeccC-cEEEEEEEeccCC-cceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEE----EE
Confidence 7888876 5899999999988 5999999998 5999999999985 6655 48999999999 99
Q ss_pred EEEccCCccC-----------------cCCCCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCC
Q psy4302 299 VLNINLDAAH-----------------MGSRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAV 361 (613)
Q Consensus 299 ~v~a~~~~~~-----------------~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 361 (613)
||++++.++. ........++++|.......... ...+.. +...... .....
T Consensus 339 lV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~------~~~~~~~-----~~~~~ 406 (612)
T 3gyr_A 339 LVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDS-FALPEV------LSGSFRR-----MSHDI 406 (612)
T ss_dssp EEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCC-CCCCSS------CCSSCCC-----CCTTS
T ss_pred EEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCc-cccccc------ccccccc-----ccccc
Confidence 9999988762 01122334667766422111111 110100 0000000 00000
Q ss_pred CceEEEEEEeeeeeccCc---------------cccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCC
Q psy4302 362 PDIRLVFAVDEYHFTRDS---------------LFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKE 426 (613)
Q Consensus 362 pd~~~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~ 426 (613)
+................. ..... ................+.+|+..|
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~----------------- 468 (612)
T 3gyr_A 407 PHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVP-AEGVIQVTGADGRTKTYRRTARTF----------------- 468 (612)
T ss_dssp CCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCS-CTTEEEEECTTSCEEEEEEEECST-----------------
T ss_pred cccccccccccccccccccccccccccccccccccccc-ccceeeeccCCCccccccccCccC-----------------
Confidence 111111110000000000 00000 000000000001111112222111
Q ss_pred CCCCCCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccc
Q psy4302 427 MECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGK 506 (613)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~ 506 (613)
.....+.++.|++|+|+|+|. + .+.||||||||+||||+++......... ....
T Consensus 469 ---------------------~~~~~~~~~~g~~~~w~i~N~-~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~-~~~~ 522 (612)
T 3gyr_A 469 ---------------------NDGLGFTIGEGTHEQWTFLNL-S---PILHPMHIHLADFQVLGRDAYDASGFDL-ALGG 522 (612)
T ss_dssp ---------------------TSCCCEEEETTCEEEEEEEEC-S---SSCEEEEESSCEEEEEEEEEEECTTEET-TTTE
T ss_pred ---------------------CCCcceEeCCCCEEEEEEEcC-C---CCCcCEeECCCcEEEEeecCCcCccccc-cccc
Confidence 123457889999999999999 4 5699999999999999986532211000 0000
Q ss_pred hHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEE-ecCcceeEEeechhhhhhcCceEEEEeccCCCC
Q psy4302 507 LQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVH-FNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDF 578 (613)
Q Consensus 507 ~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~-adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~ 578 (613)
.......+.......+..++.|||||.||++||++|||+ +||||.|||||||++|++.|||+.|+|.+++.+
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~~ 595 (612)
T 3gyr_A 523 TRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEAL 595 (612)
T ss_dssp ESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHHH
T ss_pred cccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCccC
Confidence 000000011112234567889999999999999999998 799999999999999999999999999866543
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=8.7e-74 Score=625.67 Aligned_cols=409 Identities=23% Similarity=0.347 Sum_probs=304.1
Q ss_pred CCCceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCc
Q psy4302 17 AKPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRV 96 (613)
Q Consensus 17 ~~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~ 96 (613)
....+.+|+|+++... ....+|+++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++
T Consensus 46 ~~~~~~~~~L~~~~~~---------------------~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~-~~ 103 (481)
T 3zx1_A 46 KEKNIFHATLEIKENH---------------------IELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLK-EA 103 (481)
T ss_dssp CSTTEEEEEEEEEEEE---------------------ECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSS-SC
T ss_pred cCCCeEEEEEEEEEEE---------------------EEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCC-CC
Confidence 3467899999999754 1235789999999999999999999999999999999998 89
Q ss_pred eeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC--CCceEEeecC----cccccCCceeeEEEeCCCCCCCC
Q psy4302 97 VTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP--YGTFFYHSHI----GFQKMDGLEGPLVIRRPKKADPN 170 (613)
Q Consensus 97 ~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~--~GT~wyH~H~----~~q~~~Gl~G~liV~~~~~~~p~ 170 (613)
|+|||||+++. ++|||+| ||+|+||++|+|+|++++ +||||||||. +.|+++||+|+|||+++++.
T Consensus 104 tsiHwHGl~~~--~~~DG~p---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~--- 175 (481)
T 3zx1_A 104 TTIHWHGVPVP--PDQDGSP---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDA--- 175 (481)
T ss_dssp BCCEEETCCCC--GGGSCCT---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCT---
T ss_pred eeEEecCcccC--CccCCCc---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCcccc---
Confidence 99999999985 6899986 899999999999999986 8999999996 68999999999999987432
Q ss_pred CCCCCCCCCceEEEEeeeccCCCCcccCCC-CCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEe
Q psy4302 171 RDQYDTDYPSHTIIITDWLHGMTDAKFPGN-TYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIG 249 (613)
Q Consensus 171 ~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN 249 (613)
.++++ +..|+|+||+++......... .....+..++.+||||+.. |.++|++|+ ||||||
T Consensus 176 --~~~~~--~~~l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~~-------------p~l~v~~g~--RlRliN 236 (481)
T 3zx1_A 176 --LSHLK--EKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK-------------PKIKLATNE--RIRIYN 236 (481)
T ss_dssp --TTTSE--EEEEEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEES-------------CEEEEETTE--EEEEEE
T ss_pred --ccCCC--ceeEEEEEEeccCCCccccccchhhccCCcCCEEEECCccC-------------ceEEecCCC--EEEEEe
Confidence 23444 345999999987654432110 0011245678999999987 899999998 999999
Q ss_pred cCCCCCcEEEEEeceeeEEEEeCCccc-ceeeeeEEEEccceeeeecccEEEEccCCccC-------cC------CCCce
Q psy4302 250 GSCLACPMLFFVEKHRMNLITVDGTPV-QPQMFDSITIFPGQYTPVNSAIVLNINLDAAH-------MG------SRRDR 315 (613)
Q Consensus 250 ~~~~~~~~~~~i~gh~~~via~DG~~v-~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-------~~------~~~~~ 315 (613)
++.. +.+.|+|+||+|+||++||.++ +|+.+++|.|+||||| ||+|++++.+.. .. .....
T Consensus 237 a~~~-~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~----dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~ 311 (481)
T 3zx1_A 237 ATAA-RYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRV----EVLIDAPKDGNFKLESAYYDRDKMMVKEEPNT 311 (481)
T ss_dssp CCSS-CCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEE----EEEEECSSCEEEEEEECCCCCCCSSCCCCCCC
T ss_pred cCCC-eEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEE----EEEEEcCCCcEEEEEEecccccCccccCCCCc
Confidence 9987 5999999999999999998766 6999999999999999 999999875431 00 01223
Q ss_pred eEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecC
Q psy4302 316 LNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSS 395 (613)
Q Consensus 316 ~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (613)
..++++..... .. ..+ ..|..+.+. ..++.+..+.+..... .+ ..+....
T Consensus 312 ~~~~~~~~~~~--~~---~lP------~~l~~~~~~--------~~~~~~r~~~l~~~~~---~~--------~~~~~~~ 361 (481)
T 3zx1_A 312 LFLANINLKKE--NV---ELP------KNLKIFKPS--------EEPKEFKEIIMSEDHM---QM--------HGMMGKS 361 (481)
T ss_dssp EEEEEEEEECC--CC---CCC------SCSCCCCCC--------CCCCEEEEEEEEECCS---TT--------TTGGGCC
T ss_pred eeEEEEecCCC--Cc---cCC------ccccCCCCC--------CCCCcEEEEEEeccch---hc--------ccccccc
Confidence 44454442110 00 001 112211111 1233333333322110 00 0000000
Q ss_pred CCc-----eeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCCC
Q psy4302 396 PNV-----IKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIG 470 (613)
Q Consensus 396 ~~~-----~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~ 470 (613)
... ...|+|||..|.. . ...+.++.|++|+|+|.|. +
T Consensus 362 ~~~~~~~~~~~~~iNG~~~~~-~------------------------------------~~~~~~~~G~~v~w~l~N~-~ 403 (481)
T 3zx1_A 362 EGELKIALASMFLINRKSYDL-K------------------------------------RIDLSSKLGVVEDWIVINK-S 403 (481)
T ss_dssp HHHHHHHHHTTEEETTBCCCT-T------------------------------------CCCEEEETTCCEEEEEEEC-S
T ss_pred cccccccccceeEECCEeCCC-C------------------------------------CceEEeCCCCEEEEEEEcC-C
Confidence 000 0148899988741 0 1236889999999999998 4
Q ss_pred CCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEEecCcc
Q psy4302 471 PTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPG 550 (613)
Q Consensus 471 ~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~adNPG 550 (613)
.+.|||||||+.|+|+++...+... ....+.|||||.|+++++++|+|+|||||
T Consensus 404 ---~~~Hp~HlHG~~F~vl~~~~~g~~~-----------------------~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG 457 (481)
T 3zx1_A 404 ---HMDHPFHIHGTQFELISSKLNGKVQ-----------------------KAEFRALRDTINVRPNEELRLRMKQDFKG 457 (481)
T ss_dssp ---SSCEEEEETTCCEEEEEEEETTEEE-----------------------ECSSCCEESEEEECTTCEEEEEECCCSCE
T ss_pred ---CCceeEEEeccEEEEEEecccCCCC-----------------------CcccCcccceEEECCCCEEEEEEEcCCCe
Confidence 5799999999999999983111100 12357899999999999999999999999
Q ss_pred eeEEeechhhhhhcCceEEEEec
Q psy4302 551 IWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 551 ~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
.|+||||+++|++.|||..|+|.
T Consensus 458 ~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 458 LRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEEEEESSHHHHHTTCEEEEEEE
T ss_pred eEEEEcCChHHHhcCCceEEEEe
Confidence 99999999999999999999986
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.2e-74 Score=630.70 Aligned_cols=380 Identities=21% Similarity=0.314 Sum_probs=285.4
Q ss_pred EEECCC-CCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeec-CCCceE
Q psy4302 65 LTINRR-LPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAM-PYGTFF 142 (613)
Q Consensus 65 ~~iNg~-~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~-~~GT~w 142 (613)
|+|||+ +|||+|+|++||+|+|+|+|+|+ ++|+|||||+++. ++|||+|+ |+|+||++|+|+|+++ ++||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~--~~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~w 101 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVN--WHNDAHPS---FAITPGESYNYSFDVVNRAGTYL 101 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCC--HHHHTCGG---GCBCTTCEEEEEEECCSCSEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCC-CceeEEeCCccCC--CccCCCCC---ccCCCCCEEEEEEEcCCCCCceE
Confidence 899999 99999999999999999999998 8999999999985 57999998 9999999999999998 799999
Q ss_pred Eeec----CcccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCC--CCCCCCCCCcceeecC
Q psy4302 143 YHSH----IGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGN--TYANFGTRTESFLING 216 (613)
Q Consensus 143 yH~H----~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~lING 216 (613)
|||| ++.|+++||+|+|||+++++. .. ..+|..|++|+|+||+++. ....... .....+..++.+||||
T Consensus 102 YH~H~~~~~~~q~~~Gl~G~liV~~~~~~--~~--l~~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG 176 (448)
T 3aw5_A 102 YHPHPHGLTAKQFYMGQLGLVIVEDSGSD--LG--FKYGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNG 176 (448)
T ss_dssp EEECCTTTHHHHHHTTCCEEEEEECTTTT--TT--CCBTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETT
T ss_pred eccCCCCchHHHHhccceEEEEEeCCccc--cC--CCCCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECC
Confidence 9999 789999999999999988543 11 2234348999999999987 4432200 0012245688999999
Q ss_pred cccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEE--ec---eeeEEEEeCCcccc-eeeeeEEEEccce
Q psy4302 217 RSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFV--EK---HRMNLITVDGTPVQ-PQMFDSITIFPGQ 290 (613)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i--~g---h~~~via~DG~~v~-P~~~d~l~l~pge 290 (613)
+.. +.++|++| +|||||||+|.. +.+.|+| +| |+|+||++||.+++ |..+++|.|+|||
T Consensus 177 ~~~-------------p~~~v~~g-~~RlRliNa~~~-~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pge 241 (448)
T 3aw5_A 177 VKD-------------AVFKLSGG-SYRLRLVNGSNA-RLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAE 241 (448)
T ss_dssp EET-------------CEEEEEEE-EEEEEEEECSSS-CCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTC
T ss_pred ccc-------------ceEEECCC-eEEEEEEcCCCc-ceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcc
Confidence 988 89999999 999999999988 5899999 99 99999999999998 9999999999999
Q ss_pred eeeecccEEEEccCCc-c---C--c---------------CCCCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCC
Q psy4302 291 YTPVNSAIVLNINLDA-A---H--M---------------GSRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLT 349 (613)
Q Consensus 291 R~~~~~dv~v~a~~~~-~---~--~---------------~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 349 (613)
|| ||+|++++.. . . . .......++++|.+...... + ..|..+.
T Consensus 242 R~----dvlv~~~~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p------~~L~~lp 305 (448)
T 3aw5_A 242 RA----EVVVELGEGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------V------EALSDPP 305 (448)
T ss_dssp EE----EEEEEECSEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------C------CCCSCCC
T ss_pred eE----EEEEECCCCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------c------cccCCCC
Confidence 99 9999998421 0 0 0 01123456778865321110 1 0111111
Q ss_pred CCCccccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCC
Q psy4302 350 PATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMEC 429 (613)
Q Consensus 350 ~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~ 429 (613)
+. ......++++.+..+ ...|.|||++|..+ .|
T Consensus 306 ~~-----~~~~~~~~~~~l~~~---------------------------~~~~~iNg~~~~~~-~p-------------- 338 (448)
T 3aw5_A 306 PE-----PPKPTRTRRFALSLS---------------------------GMQWTINGMFWNAS-NP-------------- 338 (448)
T ss_dssp CC-----CCCCSEEEEEEEEEE---------------------------TTEEEETTBCCCTT-CT--------------
T ss_pred CC-----CCCCCceEEEEEeCC---------------------------CceeeECCCcCCCC-CC--------------
Confidence 10 111112233322210 11488999998532 11
Q ss_pred CCCCCccCCccccCCccceeeEEEE-ecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchH
Q psy4302 430 PKDRSVCGKSAEKGGKLCECVEIIK-VGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQ 508 (613)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~ 508 (613)
.+. ++.|++|+|+|+|. + ..+.||||||||+||||++++. .. ..+
T Consensus 339 ----------------------~~~~~~~g~~v~~~i~N~-~--~~~~HP~HLHG~~F~Vl~~~G~--~~-------~~~ 384 (448)
T 3aw5_A 339 ----------------------LFEHVSVEGVELWEIVND-K--ASMPHPMHLHGFPMWIIERKDS--PR-------QVA 384 (448)
T ss_dssp ----------------------TCCCEEECEEEEEEEEEC-S--SSCCEEEEESSSCBEEEEEESC--CH-------HHH
T ss_pred ----------------------ceeccCCCCeEEEEEEcC-C--CCCCcCEEECCceEEEEEecCC--Cc-------ccc
Confidence 123 67899999999998 4 1468999999999999999542 11 111
Q ss_pred HhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEE--EE---ecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 509 ERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVR--VH---FNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 509 ~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIr--f~---adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
+..+. ....+..++.|||||.||++|+++|+ |+ +||| |+|||||++|++.|||++|+|.
T Consensus 385 ~~~~~----~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 385 ELAVD----NRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp TTCCS----TTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred ccccc----ccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 11100 00112345679999999999999655 99 9999 9999999999999999999883
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=3.3e-72 Score=612.96 Aligned_cols=424 Identities=21% Similarity=0.290 Sum_probs=298.1
Q ss_pred eEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEE
Q psy4302 21 VCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIH 100 (613)
Q Consensus 21 ~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiH 100 (613)
..+|+|+++... +..+|+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++||
T Consensus 17 ~~~~~l~~~~~~----------------------~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiH 73 (488)
T 3od3_A 17 RNRIQLTIGAGQ----------------------STFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLH 73 (488)
T ss_dssp TSEEEEEEEEEE----------------------EEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSS-SCBCCE
T ss_pred CeeEEEEEEEEE----------------------EccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCc-CceeEe
Confidence 456888888754 233899999999999999999999999999999999998 899999
Q ss_pred eCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC-CCceEEeecC----cccccCCceeeEEEeCCCCCC-CCCCCC
Q psy4302 101 WHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP-YGTFFYHSHI----GFQKMDGLEGPLVIRRPKKAD-PNRDQY 174 (613)
Q Consensus 101 wHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~-~GT~wyH~H~----~~q~~~Gl~G~liV~~~~~~~-p~~~~~ 174 (613)
|||+++.+ ++||+| ||+|+||++|+|+|++++ +||||||||. +.|+++||+|+|||+++.+.. +....|
T Consensus 74 wHG~~~~~--~~DG~p---~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y 148 (488)
T 3od3_A 74 WHGLEVPG--EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQW 148 (488)
T ss_dssp EETCCCCH--HHHCCT---TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCB
T ss_pred ecccccCc--ccCCCC---cCcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccC
Confidence 99999864 699987 899999999999999987 7999999996 689999999999999874322 122334
Q ss_pred CCCCCceEEEEeeeccCCCCcccCCCC--CCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCC
Q psy4302 175 DTDYPSHTIIITDWLHGMTDAKFPGNT--YANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSC 252 (613)
Q Consensus 175 d~d~~e~~l~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 252 (613)
+.+ |.+|+|+||+++.......... ....+..++.+||||+.+ |.+.+ +|++|||||||++.
T Consensus 149 ~~~--d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~-------------p~~~v-~g~~~RlRliNas~ 212 (488)
T 3od3_A 149 GID--DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY-------------PQHAA-PRGWLRLRLLNGCN 212 (488)
T ss_dssp TTT--EEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSS-------------CEEEE-EEEEEEEEEEECCS
T ss_pred Ccc--ceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcC-------------ccEec-CCCEEEEEEEccCC
Confidence 444 7999999999976544322111 012245678999999987 66666 56899999999998
Q ss_pred CCCcEEEEE-eceeeEEEEeCCccc-ceeeeeEEEEccceeeeecccEEEEccCCccC----c--C---C----CCceeE
Q psy4302 253 LACPMLFFV-EKHRMNLITVDGTPV-QPQMFDSITIFPGQYTPVNSAIVLNINLDAAH----M--G---S----RRDRLN 317 (613)
Q Consensus 253 ~~~~~~~~i-~gh~~~via~DG~~v-~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~----~--~---~----~~~~~a 317 (613)
. +.+.|+| +||+|+||++||.++ +|+.+++|.|+||||| ||+|++++.+.. . . . ......
T Consensus 213 ~-~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~----dvlv~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~ 287 (488)
T 3od3_A 213 A-RSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERF----EVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHP 287 (488)
T ss_dssp S-CCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEE----EEEEEECTTCCEEEEECCCSSTTTTSTTTTSCEE
T ss_pred C-ceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEE----EEEEEeCCCceEEEEEeccCCCCcccccccCccc
Confidence 7 5999999 699999999999987 7999999999999999 999999974331 0 0 0 001122
Q ss_pred EEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCCCceEEEEEEeeeee-----------ccCccccCCcc
Q psy4302 318 ILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHF-----------TRDSLFWNDED 386 (613)
Q Consensus 318 il~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~~~~l~~~~~~~-----------~~~~~~~~~~~ 386 (613)
+++......+.... . ...|..+.+.+ .+...+.+++.+.++.... ....+-+....
T Consensus 288 ~~~~~~~~~~~~~~---~------P~~L~~~~~~~----~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (488)
T 3od3_A 288 VMRIQPIAISASGA---L------PDTLSSLPALP----SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHS 354 (488)
T ss_dssp EEEEEEEEEECCCC---C------CSCCCCCCCCC----CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHH
T ss_pred eeEecccccCCCCC---C------CcccccCCCCc----ccccccceEEEEEeccccccccccccccccccccccccccc
Confidence 33332110000000 0 01111111111 1112234555554421000 00000000000
Q ss_pred cce-----e-eeecCCCc----eeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEec
Q psy4302 387 EYH-----R-WFQSSPNV----IKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVG 456 (613)
Q Consensus 387 ~~~-----~-~~~~~~~~----~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 456 (613)
... + ......+. ...|.|||++|.. . ...+.++
T Consensus 355 ~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~-~------------------------------------~~~~~~~ 397 (488)
T 3od3_A 355 QMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM-N------------------------------------KPMFAAA 397 (488)
T ss_dssp HHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT-T------------------------------------CCSEECC
T ss_pred ccccccccCccccccccccccccceeeECCeeCCC-C------------------------------------CCceEcC
Confidence 000 0 00000000 0136899988742 1 1136889
Q ss_pred CCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccceEEcCC
Q psy4302 457 LNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPP 536 (613)
Q Consensus 457 ~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~ 536 (613)
.|++|+|.|.|. +. .+.|||||||++|+|+++++.... ...+.|||||.|+
T Consensus 398 ~G~~e~w~l~N~-~~--~~~Hp~HlHg~~F~Vl~~~g~~~~-------------------------~~~~~~kDTV~v~- 448 (488)
T 3od3_A 398 KGQYERWVISGV-GD--MMLHPFHIHGTQFRILSENGKPPA-------------------------AHRAGWKDTVKVE- 448 (488)
T ss_dssp BSSCEEEEEECT-TC--CCCEEEEETTCCBEEEEBTTBCCC-------------------------GGGSSSBSEEEES-
T ss_pred CCCEEEEEEEeC-CC--CCCccEEEcCceEEEeccCCCccc-------------------------cccCCceeEEEeC-
Confidence 999999999998 42 468999999999999998652211 1235799999999
Q ss_pred CcEEEEEEEe----cCcceeEEeechhhhhhcCceEEEEe
Q psy4302 537 NGYTVVRVHF----NNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 537 ~g~~vIrf~a----dNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
++++.|+|++ +|||.||||||+++|++.|||..|.|
T Consensus 449 g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 449 GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 9999999997 45789999999999999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.4e-70 Score=611.44 Aligned_cols=455 Identities=16% Similarity=0.193 Sum_probs=306.4
Q ss_pred ceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCC----
Q psy4302 20 MVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDR---- 95 (613)
Q Consensus 20 ~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~---- 95 (613)
...+|++++.... ..+.+|+.++.+|+|||++|||+|+|++||+|+|+|+|+|+..
T Consensus 31 ~~~~~~l~~~~~~--------------------~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~ 90 (612)
T 2g23_A 31 VTRETEIALRPTW--------------------VRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYP 90 (612)
T ss_dssp TTBCEEEEEEEEE--------------------ECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCS
T ss_pred CeEEEEEEEEEEE--------------------EEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCccccc
Confidence 3567888887654 2245567789999999999999999999999999999999842
Q ss_pred ------------------------------------ceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeec-CC
Q psy4302 96 ------------------------------------VVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAM-PY 138 (613)
Q Consensus 96 ------------------------------------~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~-~~ 138 (613)
.++|||||+++.. .+||+| ||+|+||++|+|+|++. ++
T Consensus 91 ~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p---~~~i~PG~s~~Y~f~~~~~a 165 (612)
T 2g23_A 91 VTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQA 165 (612)
T ss_dssp EEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCS
T ss_pred ccccccccccCCCcccccccccccccccccccccCCceEEEcCCCCCCC--ccCCCC---cCCCCCCCeEEEEEEecCCC
Confidence 2899999999875 599986 89999999999999997 69
Q ss_pred CceEEeecCc----ccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCc-ccC-----C-----CC-C
Q psy4302 139 GTFFYHSHIG----FQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDA-KFP-----G-----NT-Y 202 (613)
Q Consensus 139 GT~wyH~H~~----~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~-~~~-----~-----~~-~ 202 (613)
||||||||.. .|+.+||+|+|||+++.+.......+|. |++|+|+||+++.... .+. . .. .
T Consensus 166 GT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~d~---d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~ 242 (612)
T 2g23_A 166 TQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDR---EIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNP 242 (612)
T ss_dssp CEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGG---EEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCS
T ss_pred ceEEEecccCCcchhhhhccceeEEEEcCcccccccCCCCcc---eEEEEEEEEeccCCccccccccccccccccccccc
Confidence 9999999985 4999999999999987432211122333 6999999999975421 110 0 00 0
Q ss_pred C-----CCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEece-------eeEEEE
Q psy4302 203 A-----NFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKH-------RMNLIT 270 (613)
Q Consensus 203 ~-----~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh-------~~~via 270 (613)
. ..+..++.+||||+.+ +.++|++| +|||||||++.. +.+.|+|++| +|+|||
T Consensus 243 ~~g~p~~~~~~gd~~lVNG~~~-------------p~~~V~~g-~yRlRliNas~~-r~~~l~i~~h~g~~~~~~~~vIa 307 (612)
T 2g23_A 243 ETGKPVSIPFFGPYTTVNGRIW-------------PYADVDDG-WYRLRLVNASNA-RIYNLVLIDEDDRPVPGVVHQIG 307 (612)
T ss_dssp SSSCCEECCCCCSEEEETTEES-------------CEEEEESS-EEEEEEEECCSS-CCEEEEEECTTSCBCTTSEEEEE
T ss_pred ccCcccccCCcCCEEEECCccC-------------CeEEecCC-eEEEEEEecCCC-eEEEEEEcCCCCccCCCcEEEEE
Confidence 0 1125679999999998 89999999 999999999988 5999999999 899999
Q ss_pred eCCcccc-eeeee------EEEEccceeeeecccEEEEccCCccC-----cCC----C--------CceeEEEEecccCC
Q psy4302 271 VDGTPVQ-PQMFD------SITIFPGQYTPVNSAIVLNINLDAAH-----MGS----R--------RDRLNILRLRKSLN 326 (613)
Q Consensus 271 ~DG~~v~-P~~~d------~l~l~pgeR~~~~~dv~v~a~~~~~~-----~~~----~--------~~~~ail~Y~~~~~ 326 (613)
+||.+++ |+.++ +|.|+||||| ||||++++..+. ... . .....|++++....
T Consensus 308 ~DG~~l~~P~~~~~~~~~~~l~l~pgeR~----dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~ 383 (612)
T 2g23_A 308 SDGGLLPRPVPVDFDDTLPVLSAAPAERF----DLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRET 383 (612)
T ss_dssp ETTEEEEEEEEECSSSSSSSEEECTTCEE----EEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECC
T ss_pred eCCeEccCCEEecccCcccEEEECCcCeE----EEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccC
Confidence 9999995 99999 9999999999 999999986552 000 0 01124666663211
Q ss_pred CCCCCCCCCCCCCcccccCcC-CCCCCccccccCCCCce-EEEEE--------------EeeeeeccCccccCCccccee
Q psy4302 327 ALDSSDCSDTNPNVCWNHVNS-LTPATEKATVLKAVPDI-RLVFA--------------VDEYHFTRDSLFWNDEDEYHR 390 (613)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~pd~-~~~l~--------------~~~~~~~~~~~~~~~~~~~~~ 390 (613)
..... ...| ..|.. ..+++.. .+.. ++.+. +.+.......-.... .-..
T Consensus 384 ~~~~~-~~~P------~~L~~~~~~l~~~------~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 448 (612)
T 2g23_A 384 CEEDS-FALP------EVLSGSFRRMSHD------IPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVP--AEGV 448 (612)
T ss_dssp SCCCC-CCCC------SSCCSSCCCCCTT------SCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCS--CTTE
T ss_pred CCCCC-CCCC------hhhccccccCCcc------cccceeEEeeccccccccccccceeeccccccccccccc--cccc
Confidence 11111 1111 11111 1111000 0111 11111 000000000000000 0000
Q ss_pred ee-ecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCC
Q psy4302 391 WF-QSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWI 469 (613)
Q Consensus 391 ~~-~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~ 469 (613)
+. ....+....|.|||..|.. ...+.++.|++|+|.|+|.
T Consensus 449 ~~~~~~~g~~~~~~iNG~~~~~--------------------------------------~~~~~v~~G~~v~w~l~N~- 489 (612)
T 2g23_A 449 IQVTGADGRTKTYRRTAATFND--------------------------------------GLGFTIGEGTHEQWTFLNL- 489 (612)
T ss_dssp EEEECTTSCEEEEEEEECSTTS--------------------------------------CCCEEEETTCEEEEEEEEC-
T ss_pred eeeeccCCceeEEEECCccCCC--------------------------------------CCceEecCCCEEEEEEEeC-
Confidence 00 0012223457788877631 1236889999999999999
Q ss_pred CCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHh---hhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEEe
Q psy4302 470 GPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQER---LAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHF 546 (613)
Q Consensus 470 ~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~a 546 (613)
+ .+.|||||||+.|+|++++... ... |....... ...........+..++.|||||.|+++++++|+|+|
T Consensus 490 ~---~~~HPiHlHg~~F~Vl~r~~~~-~~~---~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~ 562 (612)
T 2g23_A 490 S---PILHPMHIHLADFQVLGRDAYD-ASG---FDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKF 562 (612)
T ss_dssp S---SSCEEEEESSCCEEEEEEEEEE-CTT---EETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEEC
T ss_pred C---CCCCCeEEcCceEEEecccCcc-ccc---ccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEe
Confidence 4 4699999999999999986421 100 00000000 000000001234566779999999999999999999
Q ss_pred c-CcceeEEeechhhhhhcCceEEEEeccCCCCCCCCC
Q psy4302 547 N-NPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPP 583 (613)
Q Consensus 547 d-NPG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~p~ 583 (613)
+ |||.|+|||||++|++.|||..|+|.. +++.+.|.
T Consensus 563 ~~~pG~w~~HCHil~Hed~GMm~~f~V~p-~~~~~~~~ 599 (612)
T 2g23_A 563 DGAYGRFMYHCHLLEHEDMGMMRPFVVMP-PEALKFDH 599 (612)
T ss_dssp CSCCEEEEEEESSHHHHTTTCEEEEEEEC-HHHHTTC-
T ss_pred CCCCccEEEEeCchhHhhcCCceEEEECc-hhhccCCC
Confidence 9 999999999999999999999999963 44445443
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2.2e-49 Score=412.95 Aligned_cols=259 Identities=27% Similarity=0.437 Sum_probs=213.4
Q ss_pred eEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEE
Q psy4302 21 VCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIH 100 (613)
Q Consensus 21 ~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiH 100 (613)
+++|+|+++... ....+|+.+.+|+|||++|||+|+|++||+|+|+|+|.+. .+++||
T Consensus 2 ~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~siH 59 (318)
T 3g5w_A 2 KREFDLSIEDTR---------------------IVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTT-LPHTIH 59 (318)
T ss_dssp EEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCE
T ss_pred eEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCC-CceeEE
Confidence 578999998754 2234689999999999999999999999999999999997 899999
Q ss_pred eCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCcccc---cCCceeeEEEeCCCCCCCCCCCCCCC
Q psy4302 101 WHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQK---MDGLEGPLVIRRPKKADPNRDQYDTD 177 (613)
Q Consensus 101 wHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~---~~Gl~G~liV~~~~~~~p~~~~~d~d 177 (613)
|||+++.+++++||+|++|||+|+||++++|+|+++++||||||||...+. .+||+|+|||++++... ...++|
T Consensus 60 ~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~---~~~~~d 136 (318)
T 3g5w_A 60 WHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLP---IEKTVT 136 (318)
T ss_dssp EETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCH---HHHTCC
T ss_pred ecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCccc---cccccc
Confidence 999999988899999999999999999999999999999999999997654 48999999999764321 011234
Q ss_pred CCceEEEEeeeccCCCCcccCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcE
Q psy4302 178 YPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPM 257 (613)
Q Consensus 178 ~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 257 (613)
. |++|+++||++......- ..+..+..++.++|||+.+ .....++|++|++|||||+|++.. .+
T Consensus 137 ~-e~~l~l~dw~~~~~~~~~---~~~~~~~~~d~~~ING~~~----------~~~~~l~v~~G~~vrlrliN~~~~--~h 200 (318)
T 3g5w_A 137 K-DYILMLSDWVSSWANKPG---EGGIPGDVFDYYTINAKSF----------PETQPIRVKKGDVIRLRLIGAGDH--VH 200 (318)
T ss_dssp E-EEEEEEEEECGGGTTCTT---CCCCTTCCCCEEEETTBCB----------TSSCCEEECTTCEEEEEEEECSSS--CE
T ss_pred c-eeEEEEEeeccccccccc---cCCCCCCcCcEEEEcCcCC----------CCCccEEeCCCCEEEEEEEeCCCc--eE
Confidence 3 799999999986542211 1112234578999999986 112458999999999999999975 57
Q ss_pred EEEEeceeeEEEEeCCccc-ceeeeeEEEEccceeeeecccEEEEccCCccC---------cC----CCCceeEEEEecc
Q psy4302 258 LFFVEKHRMNLITVDGTPV-QPQMFDSITIFPGQYTPVNSAIVLNINLDAAH---------MG----SRRDRLNILRLRK 323 (613)
Q Consensus 258 ~~~i~gh~~~via~DG~~v-~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~---------~~----~~~~~~ail~Y~~ 323 (613)
.|+||||.|+||+.||.++ +|..+|++.|.||||+ ||+++++++|.- .. ......++|+|.+
T Consensus 201 ~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~----~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g 276 (318)
T 3g5w_A 201 AIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERY----DVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEE 276 (318)
T ss_dssp EEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEE----EEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred EEEECCcEEEEEecCCcccCCCccccEEEECCCCEE----EEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECC
Confidence 8889999999999999998 6999999999999999 999999998761 11 1244578999997
Q ss_pred c
Q psy4302 324 S 324 (613)
Q Consensus 324 ~ 324 (613)
.
T Consensus 277 ~ 277 (318)
T 3g5w_A 277 V 277 (318)
T ss_dssp T
T ss_pred C
Confidence 3
No 19
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.3e-51 Score=470.46 Aligned_cols=218 Identities=18% Similarity=0.212 Sum_probs=165.7
Q ss_pred CeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc--------cccccCCCCCeEE
Q psy4302 59 GVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL--------LTQCPIIPETTYR 130 (613)
Q Consensus 59 G~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~--------vtq~pI~pG~~~~ 130 (613)
|+.+..|+ ++|||+|+|++||+|+|+|+|+|+ +++||||||+++.. +|||+|+ +|||+|+||++|+
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~-~~tsIHwHGl~~~~--~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMAS-HPVSLHAVGVSYWK--ASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCSS-SCCCCCCSSSCCCS--SSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECCC-CCEeEEecCcccCc--cccCCccCCCCcccccccCcCCCCCeEE
Confidence 55555553 899999999999999999999998 89999999999852 4555553 8999999999999
Q ss_pred EEEeec----------CCCceEEeecCcc--cccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEee------eccCC
Q psy4302 131 YKFPAM----------PYGTFFYHSHIGF--QKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITD------WLHGM 192 (613)
Q Consensus 131 Y~f~~~----------~~GT~wyH~H~~~--q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d------~~~~~ 192 (613)
|+|++. ++||||||||... |+.+||+|+|||+++...++.. ..+..|++|++++ |++..
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~---~~~~~e~~l~~~~~de~~~w~~~~ 213 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEK---TQTLHKFILLFAVFDEGKSWHSET 213 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTT---TTCCCEECCCEECCCCSSSSCCCC
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCccc---CceeeEEEEEeecccCCccccccc
Confidence 999984 4699999999876 7999999999999885433221 1122478887764 44433
Q ss_pred CCcccCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeC
Q psy4302 193 TDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVD 272 (613)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~D 272 (613)
....+............+.++|||+.. ...+.+.|++|++|||||+|++.....+.|+||||.|+|++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ING~~~----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~- 282 (742)
T 2r7e_A 214 KNSLMQDRDAASARAWPKMHTVNGYVN----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH- 282 (742)
T ss_dssp CC-------CCSCCCCCCCCEETTBCT----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE-
T ss_pred cccccccCCCccccccCceEEECCccC----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE-
Confidence 221111000011122356789999975 234678999999999999999976324677799999999852
Q ss_pred CcccceeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 273 GTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 273 G~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
.+|++.|.|||++ +|+|.++++|.
T Consensus 283 -------~~Dtv~v~Pg~~~----~v~~~~~~pG~ 306 (742)
T 2r7e_A 283 -------RQASLEISPITFL----TAQTLLMDLGQ 306 (742)
T ss_dssp -------ECCSCCCCTTCCC----EEEECCCSCSE
T ss_pred -------ecceEEeCCCcEE----EEEEEeCCCee
Confidence 4789999999999 99999999876
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=4e-48 Score=407.57 Aligned_cols=259 Identities=25% Similarity=0.433 Sum_probs=212.8
Q ss_pred ceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeE
Q psy4302 20 MVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTI 99 (613)
Q Consensus 20 ~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~ti 99 (613)
.+++|+|++++.. ....||+++.+|+|||++|||+|+|++||+|+|+|+|.+. .+++|
T Consensus 2 ~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~-~~~si 59 (339)
T 2zwn_A 2 AEREFDMTIEEVT---------------------IKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTS-LPHTI 59 (339)
T ss_dssp CEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESS-SCBCC
T ss_pred ceEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCC-CCccE
Confidence 3578899988753 2234799999999999999999999999999999999998 89999
Q ss_pred EeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCcc--ccc-CCceeeEEEeCCCCCCCCCCCCCC
Q psy4302 100 HWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGF--QKM-DGLEGPLVIRRPKKADPNRDQYDT 176 (613)
Q Consensus 100 HwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~--q~~-~Gl~G~liV~~~~~~~p~~~~~d~ 176 (613)
||||+++.+++||||+|++|||+|+||++|+|+|+++++||||||||... |.. +||+|+|||+++.... . ...+
T Consensus 60 H~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~-~--~~~~ 136 (339)
T 2zwn_A 60 HWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLP-I--EKRV 136 (339)
T ss_dssp EEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCT-T--GGGC
T ss_pred EeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCccc-c--cccC
Confidence 99999999988999999999999999999999999999999999999875 777 9999999999763321 1 1123
Q ss_pred CCCceEEEEeeeccCCCCcccCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCc
Q psy4302 177 DYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACP 256 (613)
Q Consensus 177 d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~ 256 (613)
| .|++|+++||+....... . ..+.....++.++|||+.+ .....+.|++|++|||||+|++.. .
T Consensus 137 d-~e~~l~l~d~~~~~~~~~--~-~~g~~~~~~~~~~ING~~~----------~~~~~~~v~~G~~vrlrliN~~~~--~ 200 (339)
T 2zwn_A 137 T-KDVIMMMSTWESAVADKY--G-EGGTPMNVADYFSVNAKSF----------PLTQPLRVKKGDVVKIRFFGAGGG--I 200 (339)
T ss_dssp S-EEEEEEEEEECGGGTTCT--T-CCCSTTSCCCEEEETTBCT----------TSSCCEEECTTCEEEEEEEECSSS--C
T ss_pred C-ceEEEEeeheeccccccc--C-CCCCCccccceEEEccccC----------CCcccEEECCCCEEEEEEEeCCCc--e
Confidence 3 378999999987432211 0 0011122578899999976 122468999999999999999954 6
Q ss_pred EEEEEeceeeEEEEeCCcccc-eeeeeEEEEccceeeeecccEEEEccCCccC-------c------CCCCceeEEEEec
Q psy4302 257 MLFFVEKHRMNLITVDGTPVQ-PQMFDSITIFPGQYTPVNSAIVLNINLDAAH-------M------GSRRDRLNILRLR 322 (613)
Q Consensus 257 ~~~~i~gh~~~via~DG~~v~-P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-------~------~~~~~~~ail~Y~ 322 (613)
+.|+||||.|+||+.||.+++ |..+|++.|.||||+ ||+|++++++.- . .......++|+|.
T Consensus 201 h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~----~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~ 276 (339)
T 2zwn_A 201 HAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERY----DVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYD 276 (339)
T ss_dssp EEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEE----EEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEET
T ss_pred EEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEE----EEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEEC
Confidence 888999999999999999997 899999999999999 999999998761 1 1233447999998
Q ss_pred c
Q psy4302 323 K 323 (613)
Q Consensus 323 ~ 323 (613)
+
T Consensus 277 g 277 (339)
T 2zwn_A 277 G 277 (339)
T ss_dssp T
T ss_pred C
Confidence 6
No 21
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.1e-47 Score=454.60 Aligned_cols=278 Identities=17% Similarity=0.192 Sum_probs=201.1
Q ss_pred CCCCceEEEEEEEeEeeecccccccCCCCCcc-----------ccccceeecCCCeEEeEE-------EECCC-------
Q psy4302 16 GAKPMVCYYHFTLENYATIGPACGNCINGTMD-----------DCFKKGCVTADGVERPIL-------TINRR------- 70 (613)
Q Consensus 16 ~~~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~dG~~~~~~-------~iNg~------- 70 (613)
....++++|.+.+++...- ..|.+.+. ......-....|+.+.++ +||+.
T Consensus 16 ~~~~~~r~y~i~~~~~~w~-----y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 90 (1065)
T 2j5w_A 16 PAWAKEKHYYIGIIETTWD-----YASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWL 90 (1065)
T ss_dssp ----CEEEEEEEEEEEEEE-----SCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGG
T ss_pred ccccceeEEEEEEEEEEee-----cCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCccccccc
Confidence 4446899999999965410 11111101 011122234456666666 68877
Q ss_pred -CCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCccc----CCCCCCCCCc--cccccCCCCCeEEEEEeecC------
Q psy4302 71 -LPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQR----HTPHSDGVPL--LTQCPIIPETTYRYKFPAMP------ 137 (613)
Q Consensus 71 -~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~----~~~~~DGv~~--vtq~pI~pG~~~~Y~f~~~~------ 137 (613)
+|||+|+|++||+|+|+|+|+|+ ++++|||||++++ +.+|+||+++ +|||+|+||++|+|+|++.+
T Consensus 91 ~~PGP~Ir~~~GD~v~v~v~N~l~-~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~ 169 (1065)
T 2j5w_A 91 GFLGPIIKAETGDKVYVHLKNLAS-RPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGE 169 (1065)
T ss_dssp TTSCCCEEEETTCEEEEEEEEESS-SCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCT
T ss_pred CCcCCeEEEeCCeEEEEEEEECCC-CCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCcc
Confidence 99999999999999999999998 8999999999987 5688999998 89999999999999999986
Q ss_pred ----CCceEEeecCccc--ccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEee------eccCCCCcccCCCC---C
Q psy4302 138 ----YGTFFYHSHIGFQ--KMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITD------WLHGMTDAKFPGNT---Y 202 (613)
Q Consensus 138 ----~GT~wyH~H~~~q--~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d------~~~~~~~~~~~~~~---~ 202 (613)
+||||||||...+ +++||+|+|||++++.... ...+++|. |++|+++| |++......+.... .
T Consensus 170 ~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~-p~~~~~d~-e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~ 247 (1065)
T 2j5w_A 170 GDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDK-EKEKHIDR-EFVVMFSVVDENFSWYLEDNIKTYCSEPEKVD 247 (1065)
T ss_dssp TSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSS-SSBTTCCE-EEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCC
T ss_pred CCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCC-CccCCCcc-ceEEEeeeecCCccccccchhhhhhcCccccc
Confidence 3999999999865 5799999999998854321 12345554 79999994 55432111111000 0
Q ss_pred CCC---CCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCccccee
Q psy4302 203 ANF---GTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQ 279 (613)
Q Consensus 203 ~~~---~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~ 279 (613)
... ...+..++|||+.. ...+.+.|++|++|||||||++.....+.|+|+||.|+ ++|.
T Consensus 248 ~~~~~~~~~~~~~~iNG~~~----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~ 309 (1065)
T 2j5w_A 248 KDNEDFQQSNRMYSVNGYTF----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNY 309 (1065)
T ss_dssp TTCHHHHHHTEEEEETTEET----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTE
T ss_pred cccccccccCcEEEECCccC----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCe
Confidence 000 01234689999985 12468999999999999999997534789999999999 3578
Q ss_pred eeeEEEEccceeeeecccEEEEccCCccC-------cCCCCceeEEEEecc
Q psy4302 280 MFDSITIFPGQYTPVNSAIVLNINLDAAH-------MGSRRDRLNILRLRK 323 (613)
Q Consensus 280 ~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-------~~~~~~~~ail~Y~~ 323 (613)
.+|+|.|+||||+ ||+|++++++.. ........++++|.+
T Consensus 310 ~~dtv~I~pGer~----dVlv~~~~pG~y~i~~h~~~h~~~Gm~~~~~V~~ 356 (1065)
T 2j5w_A 310 RIDTINLFPATLF----DAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 356 (1065)
T ss_dssp EESEEEECBTCEE----EEEEECCSCEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eecEEEECCCcEE----EEEEEeCCCeeEEEEecCcchhhCCCEEEEEEec
Confidence 9999999999999 999999997652 112234567888875
No 22
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=6e-48 Score=394.85 Aligned_cols=120 Identities=25% Similarity=0.387 Sum_probs=104.3
Q ss_pred CCceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCce
Q psy4302 18 KPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVV 97 (613)
Q Consensus 18 ~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~ 97 (613)
.-++++|+|++++.. .+.....++++||++|||+|+|++||+|+|+|+|+|+ +++
T Consensus 4 ~g~~~~~~l~~~~~~------------------------~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~-~~~ 58 (276)
T 3kw8_A 4 GGEVRHLKMYAEKLA------------------------DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD-VRA 58 (276)
T ss_dssp CCCEEEEEEEEEECT------------------------TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCB
T ss_pred cceEEEEEEEEEeCC------------------------CCceecceeccCCcccCCeEEEECCCEEEEEEEECCC-CCc
Confidence 357889999998632 1222334567999999999999999999999999997 899
Q ss_pred eEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC-------------CCceEEeecCc------ccccCCceee
Q psy4302 98 TIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP-------------YGTFFYHSHIG------FQKMDGLEGP 158 (613)
Q Consensus 98 tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~-------------~GT~wyH~H~~------~q~~~Gl~G~ 158 (613)
+|||||+++.. ++||++ +|||+|+||++|+|+|++.+ +||||||||.. .|+.+||+|+
T Consensus 59 siH~HG~~~~~--~~DG~~-~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~ 135 (276)
T 3kw8_A 59 SLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGP 135 (276)
T ss_dssp CCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEE
T ss_pred cEeecCcccCC--ccCCCc-CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEE
Confidence 99999999964 699999 99999999999999999964 79999999983 5899999999
Q ss_pred EEEeCCC
Q psy4302 159 LVIRRPK 165 (613)
Q Consensus 159 liV~~~~ 165 (613)
|||+++.
T Consensus 136 liV~~~~ 142 (276)
T 3kw8_A 136 VIVRRKG 142 (276)
T ss_dssp EEEECTT
T ss_pred EEEecCC
Confidence 9999874
No 23
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.7e-47 Score=395.34 Aligned_cols=100 Identities=31% Similarity=0.530 Sum_probs=89.9
Q ss_pred EEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeec----
Q psy4302 61 ERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAM---- 136 (613)
Q Consensus 61 ~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~---- 136 (613)
.+.++..||++|||+|+|++||+|+|+|+|+|+ +++||||||+++. +++||++ ++||+|+||++|+|+|++.
T Consensus 45 ~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~--~~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~ 120 (299)
T 3t9w_A 45 GYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD--VNSDGTL-MNGSAVMPGQTRRYTWRSHVGYR 120 (299)
T ss_dssp EEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC--GGGSCCT-TTTCCBCTTCEEEEEEBCCCCEE
T ss_pred eeeecCCCCCccCceEEEECCeEEEEEEEECCC-CCccEEeCCcccC--CccCCCc-cccCccCCCCeEEEEEEeecccc
Confidence 344556799999999999999999999999998 8999999999875 5799997 8999999999999999985
Q ss_pred ---------CCCceEEeecCc------ccccCCceeeEEEeCC
Q psy4302 137 ---------PYGTFFYHSHIG------FQKMDGLEGPLVIRRP 164 (613)
Q Consensus 137 ---------~~GT~wyH~H~~------~q~~~Gl~G~liV~~~ 164 (613)
++||||||||.. .|+.+||+|+|||+++
T Consensus 121 ~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~ 163 (299)
T 3t9w_A 121 RADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQ 163 (299)
T ss_dssp CTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred cCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecc
Confidence 589999999974 3678899999999976
No 24
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=2.3e-46 Score=389.68 Aligned_cols=105 Identities=27% Similarity=0.465 Sum_probs=91.5
Q ss_pred CCCe-EEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEee
Q psy4302 57 ADGV-ERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPA 135 (613)
Q Consensus 57 ~dG~-~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~ 135 (613)
++|. ...++..||++|||+|+|++||+|+|+|+|+|+ +++||||||+++. +.+||++ .+||+|+||++|+|+|++
T Consensus 24 ~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~--~~~dG~~-~~~~~i~PG~~~~Y~~~~ 99 (313)
T 3tas_A 24 GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYE--ISSDGTK-QSRSDVEPGGTRTYTWRT 99 (313)
T ss_dssp GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC--GGGSCST-TTTCCBCTTCEEEEEEBC
T ss_pred CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCC--ccCCCCc-cccCCcCCCCEEEEEEEe
Confidence 3443 345567799999999999999999999999998 8999999999985 4699998 699999999999999986
Q ss_pred c-------------CCCceEEeecCcc------cccCCceeeEEEeCCC
Q psy4302 136 M-------------PYGTFFYHSHIGF------QKMDGLEGPLVIRRPK 165 (613)
Q Consensus 136 ~-------------~~GT~wyH~H~~~------q~~~Gl~G~liV~~~~ 165 (613)
. ++||||||||... |+.+||+|+|||+++.
T Consensus 100 ~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 148 (313)
T 3tas_A 100 HVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 148 (313)
T ss_dssp CCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred ccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccc
Confidence 4 6799999999743 4689999999999874
No 25
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.1e-46 Score=408.32 Aligned_cols=371 Identities=15% Similarity=0.110 Sum_probs=241.6
Q ss_pred EeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCce
Q psy4302 62 RPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTF 141 (613)
Q Consensus 62 ~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~ 141 (613)
..+++|||++ ||+|+|++||+|+|+|+|.+. ..++|||||.. ..+||+|+||++++|.|++.++|||
T Consensus 44 g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~-~~h~~~~~g~~-----------~~~~~~i~pG~~~~~~f~~~~~Gt~ 110 (447)
T 2dv6_A 44 GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEG-AQHDVVVDQYA-----------ARSAIVNGKNASSTFSFVASKVGEF 110 (447)
T ss_dssp EESGGGTTCB-SCCEEEETTCEEEEEEECSSS-SCBCCEETTTT-----------EECCCBCSTTBEEEEEEECCSCEEE
T ss_pred ccceeecCCc-CCeEEEcCCCEEEEEEEcCCC-CceEEEEccCC-----------cccceecCCCCeEEEEEEcCCCEEE
Confidence 3456899999 999999999999999999997 46999999863 2378999999999999999999999
Q ss_pred EEeecCcccccCCceeeEEEeCCCCCCCCCCCCC---CCCCceEEEEeeeccCCCCcccCC----CCCCCCCCCCcceee
Q psy4302 142 FYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYD---TDYPSHTIIITDWLHGMTDAKFPG----NTYANFGTRTESFLI 214 (613)
Q Consensus 142 wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d---~d~~e~~l~l~d~~~~~~~~~~~~----~~~~~~~~~~~~~lI 214 (613)
|||||...|+.+||+|.|+|.++....... .++ .+..+.+..+ |+........... ......+...+.++|
T Consensus 111 ~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~-~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ 188 (447)
T 2dv6_A 111 NYYCSIAGHRQAGMEGNIQVLPGNRAEMKS-SGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLDDNTTYTYWTF 188 (447)
T ss_dssp EEECCSTTHHHHTCEEEEEEESSCCCCCCC-SSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCChhhCCCEEEEEEeCCccccCCC-cchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEeccCCceeEEEEE
Confidence 999999999999999999999875432110 000 0000000000 1110000000000 000001334568999
Q ss_pred cCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccceeeee
Q psy4302 215 NGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPV 294 (613)
Q Consensus 215 NG~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~~~ 294 (613)
||+.- .|.++|++|++|||||+|.+.....+.+++||. ++.||.+ +++.|.||||+
T Consensus 189 NG~~p------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i~pG~~~-- 244 (447)
T 2dv6_A 189 NGKVP------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQTDPGEET-- 244 (447)
T ss_dssp TTBBS------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCBCTTCEE--
T ss_pred CCccC------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEeCCCCEE--
Confidence 99852 278999999999999999985322455445553 3689874 23459999999
Q ss_pred cccEEEEccCCccC-----cC-----CCCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccccCCCCce
Q psy4302 295 NSAIVLNINLDAAH-----MG-----SRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDI 364 (613)
Q Consensus 295 ~~dv~v~a~~~~~~-----~~-----~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~ 364 (613)
++++++++++.. .. ......++|.|.+... . +. .|.
T Consensus 245 --~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~-P~---------------------------~d~ 290 (447)
T 2dv6_A 245 --VVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----L-PQ---------------------------VDR 290 (447)
T ss_dssp --EEEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----S-CC---------------------------CSE
T ss_pred --EEEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----C-CC---------------------------CCe
Confidence 999999987552 10 1122346666653110 0 00 011
Q ss_pred EEEEEEeeeee-ccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccC
Q psy4302 365 RLVFAVDEYHF-TRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKG 443 (613)
Q Consensus 365 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (613)
.+.+.++-... ......+........+. ......+.|||+.+....
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~iNG~~~~~~~------------------------------ 337 (447)
T 2dv6_A 291 EFYVMQGEIYTVKSFGTSGEQEMDYEKLI---NEKPEYFLFNGSVGSLTR------------------------------ 337 (447)
T ss_dssp EEEEEEEEECBSSCTTCCEECCBBHHHHH---TTCCSEEEETTSTTCCCC------------------------------
T ss_pred eEEEEecccccCCcccccccccCChHHhh---ccCCCEEEECCcccCCCC------------------------------
Confidence 11111100000 00000000000000000 011224678887653110
Q ss_pred CccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCC
Q psy4302 444 GKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIR 523 (613)
Q Consensus 444 ~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 523 (613)
..++.++.|++++|+|+|. +. ...||||||||+|+||++++. . +
T Consensus 338 ------~~~~~v~~g~~vrlrliN~-~~--~~~h~~hlhGh~f~vv~~dG~--~-------------------------~ 381 (447)
T 2dv6_A 338 ------SHPLYASVGETVRIFFGVG-GP--NFTSSFHVIGEIFDHVYSLGS--V-------------------------V 381 (447)
T ss_dssp ------CCCEEECTTCEEEEEEEEE-ES--SCCEEEEEETCCEEEECGGGC--S-------------------------S
T ss_pred ------CcceEECCCCEEEEEEEeC-CC--CceEeEEEcCcEEEEEEcCCc--c-------------------------c
Confidence 1357899999999999998 52 468999999999999998651 0 1
Q ss_pred CCCC-ccceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEecc
Q psy4302 524 PQPC-VKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 524 ~~p~-~kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
..|. +|||+.|++++++.|+|++||||.|+||||+++|++.||+++|.|..
T Consensus 382 ~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 382 SPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDG 433 (447)
T ss_dssp SCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECS
T ss_pred CCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeC
Confidence 2344 79999999999999999999999999999999999999999999964
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.9e-47 Score=453.43 Aligned_cols=408 Identities=14% Similarity=0.173 Sum_probs=259.4
Q ss_pred CeEEeEEEECCCCCC--CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccC-CCCCCCCCccccccCCCCCeEEEEEee
Q psy4302 59 GVERPILTINRRLPS--PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRH-TPHSDGVPLLTQCPIIPETTYRYKFPA 135 (613)
Q Consensus 59 G~~~~~~~iNg~~PG--P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~-~~~~DGv~~vtq~pI~pG~~~~Y~f~~ 135 (613)
|..+.+.+|||++|| |.|+||+||+|+++|.|. .+.+||||+++.+ ++|+||++.+| |+|.||.+++|.|++
T Consensus 615 ~~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~----g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~ 689 (1065)
T 2j5w_A 615 QESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA----GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP 689 (1065)
T ss_dssp HHHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC----CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC
T ss_pred cccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC----CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec
Confidence 367899999999999 789999999999999964 4469999999999 89999999999 999999999999999
Q ss_pred cCCCceEEeecCcccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEE----eeeccCCCCcccCCCCCCCCCCCCcc
Q psy4302 136 MPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIII----TDWLHGMTDAKFPGNTYANFGTRTES 211 (613)
Q Consensus 136 ~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l----~d~~~~~~~~~~~~~~~~~~~~~~~~ 211 (613)
.++||||||||++.|+.+||.|.++|+++...+ ...+++|. |++++| +||++..............+. .+..
T Consensus 690 ~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~--~~~~~yd~-e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~-~p~~ 765 (1065)
T 2j5w_A 690 DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQS--EDSTFYLG-ERTYYIAAVEVEWDYSPQREWEKELHHLQEQ-NVSN 765 (1065)
T ss_dssp CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCC--SCCCCCSE-EEEEEEEEEEEEEESCSCCHHHHHHHHHHTC-CCCC
T ss_pred CCCeEEEEecCCCcccCCCcEEEEEEcCCcccc--CCccCCCc-ceEEEEeeeeccccCCcchhhhhhccCCCcc-Cccc
Confidence 999999999999999999999999999874332 23467774 889999 899998775422110000011 1444
Q ss_pred eeecCcc----------cc---cCCCCCC----------CCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEE
Q psy4302 212 FLINGRS----------VF---KSGNGTS----------NPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNL 268 (613)
Q Consensus 212 ~lING~~----------~~---~~~~~~~----------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v 268 (613)
+++|+.. .| .+..-+. ...+.|.++|++|+++++||.|.... ++.++.|| +.+
T Consensus 766 ~~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~--~~sih~HG--l~~ 841 (1065)
T 2j5w_A 766 AFLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATR--PYSIHAHG--VQT 841 (1065)
T ss_dssp TTTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS--CBCCEESS--CBC
T ss_pred eeecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCC--CceEeecc--ccc
Confidence 5555431 11 1111011 13456899999999999999999754 55644544 554
Q ss_pred EEeCCcccceeeeeEEEEccceeeeecccEEEEccCCccCcCCCCceeEEEEecccCCCCCCCCCCCCCCCcccccCcCC
Q psy4302 269 ITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAAHMGSRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSL 348 (613)
Q Consensus 269 ia~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~~~~~~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~ 348 (613)
.+.++ ..+.||+++ +..+.+.+..+.. ......+..-|............+. ...+.+.+-..+
T Consensus 842 ~~~~~----------~~i~PG~~~----ty~~~~~~~~gp~-~~~~~~gt~wYhsh~~~~~q~~~GL-~G~liV~~~~~l 905 (1065)
T 2j5w_A 842 ESSTV----------TPTLPGETL----TYVWKIPERSGAG-TEDSACIPWAYYSTVDQVKDLYSGL-IGPLIVCRRPYL 905 (1065)
T ss_dssp SCSCC----------CCBCTTCEE----EEEEECCGGGSCC-TTSCSEEEEEEECCTTHHHHHHTTC-EEEEEEECCC--
T ss_pred cCCCC----------ceeCCCCeE----EEEEEecCccCCc-cccCCceEEEEecCCChHHhhhccc-cceeEecCcccc
Confidence 44321 246799998 7777776532210 0001112333432111000000000 000000000000
Q ss_pred CCCCccccccCCCCceEEEEEEeeeeeccCccccCCcccce--eeee-cCC----CceeeEEecceeccCCCCCcccccC
Q psy4302 349 TPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYH--RWFQ-SSP----NVIKTHVTNNISLGILPFPILSQDL 421 (613)
Q Consensus 349 ~~~~~~~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~----~~~~~~~iN~~s~~~p~~P~l~~~~ 421 (613)
.+ .....+..+.+.+.....+...++..+...|. +-.. ... .....+.|||..|.
T Consensus 906 ~~-------~~~~~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~iNG~~~~----------- 967 (1065)
T 2j5w_A 906 KV-------FNPRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFG----------- 967 (1065)
T ss_dssp ----------CCCCEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTBCTT-----------
T ss_pred cc-------cCCCcceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccCceEEECCccCC-----------
Confidence 00 00123344444333211111110000000000 0000 000 00012334443321
Q ss_pred CCCCCCCCCCCCCccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCccccc
Q psy4302 422 PIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHR 501 (613)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~ 501 (613)
.+..+.++.|++|+|+|+|. +. ....||||||||.|+|++++
T Consensus 968 ---------------------------~~~~~~v~~G~~vr~~l~N~-g~-~~~~HpfHlHG~~F~vv~~~--------- 1009 (1065)
T 2j5w_A 968 ---------------------------NLQGLTMHVGDEVNWYLMGM-GN-EIDLHTVHFHGHSFQYKHRG--------- 1009 (1065)
T ss_dssp ---------------------------CCCCCEEETTCEEEEEEEEC-CS-TTCCEEEEESSCCEEETTTT---------
T ss_pred ---------------------------CCccEEeCCCCEEEEEEEeC-CC-CCcceeEEEcccEEEEEecC---------
Confidence 12457899999999999998 53 24689999999999998542
Q ss_pred ccccchHHhhhccCCCCCCCCCCCCCccceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccC
Q psy4302 502 AFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDR 575 (613)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~ 575 (613)
|.+||||.|+++++++|+|+|||||.|+||||+++|++.|||++|.|.+.
T Consensus 1010 ------------------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~ 1059 (1065)
T 2j5w_A 1010 ------------------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQN 1059 (1065)
T ss_dssp ------------------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECC
T ss_pred ------------------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecC
Confidence 46999999999999999999999999999999999999999999999754
No 27
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=2.5e-44 Score=376.85 Aligned_cols=257 Identities=18% Similarity=0.259 Sum_probs=207.0
Q ss_pred CceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC-Cce
Q psy4302 19 PMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD-RVV 97 (613)
Q Consensus 19 ~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~-~~~ 97 (613)
+++.+|+|++++.. ....||+++.+|+|||++|||+|+|++||+|+|+|+|.+.. .++
T Consensus 36 ~~~~~~~l~~~~~~---------------------~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~ 94 (327)
T 1kbv_A 36 PAKVRVKMETVEKT---------------------MKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPH 94 (327)
T ss_dssp CCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCB
T ss_pred CCEEEEEEEEEEEE---------------------EEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCce
Confidence 56778999888753 12238999999999999999999999999999999999962 589
Q ss_pred eEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC---cccccCCceeeEEEeCCCCCCCCCCCC
Q psy4302 98 TIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI---GFQKMDGLEGPLVIRRPKKADPNRDQY 174 (613)
Q Consensus 98 tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~---~~q~~~Gl~G~liV~~~~~~~p~~~~~ 174 (613)
+|||||+. .+||++..+ .|+||++++|+|+++++||||||||. +.|+.+||+|+|||++++.. | .+
T Consensus 95 ~ih~HG~~-----~~dG~~~~~--~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~-p---~~ 163 (327)
T 1kbv_A 95 NVDFHAAT-----GQGGGAAAT--FTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL-P---KV 163 (327)
T ss_dssp CCEETTCC-----SGGGGTTTT--CBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC-C---CC
T ss_pred eeEeCccc-----cCCCCCcce--eecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC-C---CC
Confidence 99999985 379988655 59999999999999999999999996 68999999999999976321 1 23
Q ss_pred CCCCCceEEEEeeeccCCCCccc---CCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecC
Q psy4302 175 DTDYPSHTIIITDWLHGMTDAKF---PGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGS 251 (613)
Q Consensus 175 d~d~~e~~l~l~d~~~~~~~~~~---~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~ 251 (613)
|. |.+|+++||++....... ........+..++.++|||+.+... ..+.++|++|++|||||+|++
T Consensus 164 --d~-e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~--------~~~~l~v~~G~~vRlRliN~~ 232 (327)
T 1kbv_A 164 --DK-EFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALT--------GDNALKAKAGETVRMYVGNGG 232 (327)
T ss_dssp --SE-EEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTTS--------GGGCEEEETTEEEEEEEEEEE
T ss_pred --ce-EEEEEeeeeeccCccccccccccChhHhccCCCceEEEcCcccCCC--------CceeEEeCCCCEEEEEEECCC
Confidence 32 789999999987632110 0000011124568999999987211 125799999999999999999
Q ss_pred CCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccceeeeecccEEEEccCCccC-------cC-CCCceeEEEEecc
Q psy4302 252 CLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAAH-------MG-SRRDRLNILRLRK 323 (613)
Q Consensus 252 ~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-------~~-~~~~~~ail~Y~~ 323 (613)
.. +.+.|+|+||.|+||+.||.+++|..++++.|+||||+ ||+|++++++.. .. ......|+|+|.+
T Consensus 233 ~~-~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~----dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g 307 (327)
T 1kbv_A 233 PN-LVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSA----IVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEG 307 (327)
T ss_dssp SS-CCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEE----EEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEES
T ss_pred CC-CceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEE----EEEEEeCCCeEEEEEeccccccccCCcEEEEEECC
Confidence 76 47999999999999999999999999999999999999 999999987652 11 1345689999996
No 28
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=3.9e-44 Score=377.04 Aligned_cols=95 Identities=28% Similarity=0.513 Sum_probs=87.3
Q ss_pred ECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC---------
Q psy4302 67 INRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP--------- 137 (613)
Q Consensus 67 iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~--------- 137 (613)
+||++|||+|+|++||+|+|+|+|.+. ++++|||||+++. .++||++ ++||+|+||++|+|+|++.+
T Consensus 70 ~ng~~pGP~I~v~~Gd~v~v~~~N~l~-~~~sih~HG~~~~--~~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~ 145 (343)
T 3cg8_A 70 GKASVPGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYE--ISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTW 145 (343)
T ss_dssp TCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC--GGGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCE
T ss_pred CCCCccCCEEEEECCCEEEEEEEECCC-CCeeEEecCcccC--CcCCCcc-cccccccCCCEEEEEEEeCCCCccccccc
Confidence 589999999999999999999999997 8999999999987 5899999 89999999999999999864
Q ss_pred ----CCceEEeecC------cccccCCceeeEEEeCCC
Q psy4302 138 ----YGTFFYHSHI------GFQKMDGLEGPLVIRRPK 165 (613)
Q Consensus 138 ----~GT~wyH~H~------~~q~~~Gl~G~liV~~~~ 165 (613)
+||||||||. ..|+.+||+|++||+++.
T Consensus 146 ~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~ 183 (343)
T 3cg8_A 146 RPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 183 (343)
T ss_dssp ECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred CCCCceEEEEecCccccccchhhhhcCCeEEEEEecCC
Confidence 4899999996 368999999999998763
No 29
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.9e-43 Score=363.63 Aligned_cols=230 Identities=20% Similarity=0.299 Sum_probs=193.0
Q ss_pred ceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeE
Q psy4302 20 MVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTI 99 (613)
Q Consensus 20 ~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~ti 99 (613)
.+++|+++++... ....+|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .+++|
T Consensus 33 ~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~-~~~~i 90 (288)
T 3gdc_A 33 TLREWDIVAVDKD---------------------FEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGA-HPHTI 90 (288)
T ss_dssp EEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCC
T ss_pred cEEEEEEEEEEEE---------------------EEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCC-CcccE
Confidence 4677888877643 1223599999999999999999999999999999999998 89999
Q ss_pred EeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCc---ccccCCceeeEEEeCCCCCCCCCCCCCC
Q psy4302 100 HWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIG---FQKMDGLEGPLVIRRPKKADPNRDQYDT 176 (613)
Q Consensus 100 HwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~---~q~~~Gl~G~liV~~~~~~~p~~~~~d~ 176 (613)
||||++. .++||+|+++||+|+||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. .+.
T Consensus 91 H~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~------~~~ 161 (288)
T 3gdc_A 91 HFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR------PPA 161 (288)
T ss_dssp EESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC------CCC
T ss_pred Eeccccc---cccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC------CCC
Confidence 9999973 589999999999999999999999999999999999986 6899999999999987432 122
Q ss_pred CCCceEEEEeeeccCCCCcccCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCc
Q psy4302 177 DYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACP 256 (613)
Q Consensus 177 d~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~ 256 (613)
| .|++|+++||+... +..++.++|||+.+.. ..+.++++.|++|||||+|++.....
T Consensus 162 d-~e~~l~~~d~~~~~-------------g~~~~~~~iNG~~~~~---------~~~~l~v~~Ge~vr~~l~N~g~~~~~ 218 (288)
T 3gdc_A 162 D-DEMVMVMNGYNTDG-------------GDDNEFYSVNGLPFHF---------MDFPVKVKQHELVRIHLINVLEYDPI 218 (288)
T ss_dssp S-EEEEEEEEEECCSS-------------TTCCSEEEETTSTTHH---------HHSCEEEETTCCEEEEEEECCCSSSE
T ss_pred c-ceEEEEEeeEecCC-------------CCCcceEEECcccccc---------cCcccccCCCCEEEEEEEeCCCCCcc
Confidence 3 38999999998762 1246789999998610 12468999999999999999954324
Q ss_pred EEEEEeceeeEEEEeCCcccceeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 257 MLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 257 ~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
+.|+||||.|.|++.++....|..+|++.|.||||+ +|+++++++|.
T Consensus 219 H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~----~v~~~~~~pG~ 265 (288)
T 3gdc_A 219 NSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRG----ILELRFPYPGK 265 (288)
T ss_dssp EEEEETTCCEEEEETTCCSSCSEEESEEEEETTCEE----EEEECCCSCEE
T ss_pred eeEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceE----EEEEECCCCEE
Confidence 788899999999984443345799999999999999 99999998876
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=7.6e-41 Score=351.62 Aligned_cols=265 Identities=14% Similarity=0.122 Sum_probs=204.1
Q ss_pred CCCCceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCC
Q psy4302 16 GAKPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDR 95 (613)
Q Consensus 16 ~~~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~ 95 (613)
.+.+++++|+|++++.. ....+|+++.+|+|||++|||+|+|++||+|+|+|+|.
T Consensus 27 ~~~~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---- 81 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKE---------------------VQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---- 81 (333)
T ss_dssp SSSCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----
T ss_pred CCCCcEEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC----
Confidence 45578999999998753 11237999999999999999999999999999999998
Q ss_pred ceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCc-----ccccCCceeeEEEeCCCCCC-C
Q psy4302 96 VVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIG-----FQKMDGLEGPLVIRRPKKAD-P 169 (613)
Q Consensus 96 ~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~-----~q~~~Gl~G~liV~~~~~~~-p 169 (613)
.+++||||+++.+...+||.+.++| |+||++++|+|+++++||||||||.. .|+.+||+|+|||++++... +
T Consensus 82 ~~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~ 159 (333)
T 1mzy_A 82 PENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDH 159 (333)
T ss_dssp TTCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCT
T ss_pred CCCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCcccc
Confidence 3689999999876555666677774 99999999999999999999999986 69999999999999764321 1
Q ss_pred CCCCCCCCCCceEEEEeeeccCCC-CcccCCCC----------CCCCCCCCcceeecCcccccCCCCCCCCCccceEEEe
Q psy4302 170 NRDQYDTDYPSHTIIITDWLHGMT-DAKFPGNT----------YANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVN 238 (613)
Q Consensus 170 ~~~~~d~d~~e~~l~l~d~~~~~~-~~~~~~~~----------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~ 238 (613)
...++++|. |++|+++||++... ...+.... ....+..++.++|||+.... ...+.++|+
T Consensus 160 ~~~p~~~d~-e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~--------~~~~~l~v~ 230 (333)
T 1mzy_A 160 EGKPVRYDT-VYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGAL--------TGEGALKAK 230 (333)
T ss_dssp TSCBCCCSE-EEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTT--------SGGGCEEEE
T ss_pred ccCCCccch-heeeeeeeeccCccccccccccccccccccchhHHhhccCCcEEEECCccccc--------CCCcceEec
Confidence 122345553 78999999998421 11111100 00123567899999997510 012679999
Q ss_pred CCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccc-ee-eeeEEEEccceeeeecccEEEEccCCccC-------c
Q psy4302 239 KGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQ-PQ-MFDSITIFPGQYTPVNSAIVLNINLDAAH-------M 309 (613)
Q Consensus 239 ~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~-~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-------~ 309 (613)
+|++||||++|++... .+++ +++|.++||+ ||.+++ |. .+|++.|.||||+ ||+|++++++.. .
T Consensus 231 ~Ger~Rl~n~~~~~~~-~~h~-i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~----~v~v~a~~pG~y~~~ch~~~ 303 (333)
T 1mzy_A 231 VGDNVLFVHSQPNRDS-RPHL-IGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAG----AALYKFLQPGVYAYVNHNLI 303 (333)
T ss_dssp TTCEEEEEEEESSSCB-CEEE-ETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEE----EEEEECCSCEEEEEEESSHH
T ss_pred CCCEEEEEECCCCCcc-ccEE-ECCCCeEEEe-CCcccCCCccCcceEEECCCceE----EEEEEcCCCEEEEEecChhh
Confidence 9999999888877553 4554 8999999999 999997 44 5899999999999 999999997652 1
Q ss_pred C-CCCceeEEEEecc
Q psy4302 310 G-SRRDRLNILRLRK 323 (613)
Q Consensus 310 ~-~~~~~~ail~Y~~ 323 (613)
. ......++++|.+
T Consensus 304 h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 304 EAVHKGATAHVLVEG 318 (333)
T ss_dssp HHHTTCCEEEEEEES
T ss_pred hHhhCCCEEEEEEcC
Confidence 1 1456678999986
No 31
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=4.7e-41 Score=366.70 Aligned_cols=260 Identities=16% Similarity=0.222 Sum_probs=209.8
Q ss_pred CCCceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCC-C
Q psy4302 17 AKPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD-R 95 (613)
Q Consensus 17 ~~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~-~ 95 (613)
..+.+.+|+|++.+.. ...+||.++.+|+|||++|||+|+|++||+|+|+|+|.+.. .
T Consensus 24 ~~~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~ 82 (442)
T 2zoo_A 24 DHSAKVVINLETREQV---------------------GRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKM 82 (442)
T ss_dssp SSCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSS
T ss_pred CCCcEEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCC
Confidence 3467788999988753 12258999999999999999999999999999999999862 5
Q ss_pred ceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeec---CcccccCCceeeEEEeCCCCCCCCCC
Q psy4302 96 VVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSH---IGFQKMDGLEGPLVIRRPKKADPNRD 172 (613)
Q Consensus 96 ~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H---~~~q~~~Gl~G~liV~~~~~~~p~~~ 172 (613)
+++|||||+.+ +||++..+ +|+||++++|+|+++++|||||||| ++.|+.+||+|+|||++++.. +
T Consensus 83 ~~~iH~HG~~~-----~dG~~~~~--~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~-~--- 151 (442)
T 2zoo_A 83 PHNIDLHAVTG-----PGGGAESS--FTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL-A--- 151 (442)
T ss_dssp CBCCEETTCCS-----GGGGGGGC--CBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC-C---
T ss_pred CCCEEecCCcC-----CCCCCccE--EECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC-C---
Confidence 99999999864 78988765 7999999999999999999999997 468999999999999966321 1
Q ss_pred CCCCCCCceEEEEeeeccCCCCcccC---CCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEe
Q psy4302 173 QYDTDYPSHTIIITDWLHGMTDAKFP---GNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIG 249 (613)
Q Consensus 173 ~~d~d~~e~~l~l~d~~~~~~~~~~~---~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN 249 (613)
.| | .|++|+++||++........ .......+..++++||||+.+.. ...+.+.|++|++|||||+|
T Consensus 152 ~~--d-~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~--------~~~~~l~v~~G~~vrlrliN 220 (442)
T 2zoo_A 152 PV--D-REYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGST--------TDENSLTAKVGETVRLYIGN 220 (442)
T ss_dssp CC--S-EEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTT--------SGGGCEEEETTCEEEEEEEE
T ss_pred CC--C-ceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCC--------CCCCceEeCCCCEEEEEEEe
Confidence 23 3 37999999999876421110 00011123567899999998611 11257999999999999999
Q ss_pred cCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEccceeeeecccEEEEccCCccC-------cC-CCCceeEEEEe
Q psy4302 250 GSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAAH-------MG-SRRDRLNILRL 321 (613)
Q Consensus 250 ~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-------~~-~~~~~~ail~Y 321 (613)
++.. ..+.|+|+||.|+||++||.+++|..++++.|.||||+ ||+|++++++.. .. ......++|+|
T Consensus 221 ~~~~-~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~----~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v 295 (442)
T 2zoo_A 221 GGPN-LVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAA----IVEFKVEVPGTFILVDHSIFRAFNKGALAMLKV 295 (442)
T ss_dssp EESS-CCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEE----EEEEECCSCEEEEEEESSTHHHHTTSCEEEEEE
T ss_pred CCCC-CceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeE----EEEEEcCCCCeEEEEecccccccccCceEEEEe
Confidence 9976 47899999999999999999999999999999999999 999999987652 11 24556899999
Q ss_pred ccc
Q psy4302 322 RKS 324 (613)
Q Consensus 322 ~~~ 324 (613)
.+.
T Consensus 296 ~~~ 298 (442)
T 2zoo_A 296 EGP 298 (442)
T ss_dssp ESC
T ss_pred cCC
Confidence 863
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.6e-40 Score=349.72 Aligned_cols=263 Identities=17% Similarity=0.187 Sum_probs=199.7
Q ss_pred CCceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCce
Q psy4302 18 KPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVV 97 (613)
Q Consensus 18 ~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~ 97 (613)
.+.+.+|+|++.+.. ..+.+||.++.+|+|||++|||+|+|++||+|+|+|+|.+.
T Consensus 29 ~~~~~~~~l~~~~~~--------------------~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---- 84 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKK--------------------MVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---- 84 (336)
T ss_dssp CCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT----
T ss_pred CCcEEEEEEEEEEEE--------------------EEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC----
Confidence 467889999998764 23457899999999999999999999999999999999974
Q ss_pred eEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCc----ccccCCceeeEEEeCCCCC-CCCCC
Q psy4302 98 TIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIG----FQKMDGLEGPLVIRRPKKA-DPNRD 172 (613)
Q Consensus 98 tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~----~q~~~Gl~G~liV~~~~~~-~p~~~ 172 (613)
++||||+++.+.+++||.+.++| |+||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. ++...
T Consensus 85 ~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~ 162 (336)
T 1oe1_A 85 NAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGK 162 (336)
T ss_dssp CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSC
T ss_pred CCccccceECCCCCCCCCcceEE--eCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccC
Confidence 45677777666667788777775 99999999999999999999999973 6999999999999976432 22222
Q ss_pred CCCCCCCceEEEEeeeccCCCCc-ccCCCCCC----------CCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCc
Q psy4302 173 QYDTDYPSHTIIITDWLHGMTDA-KFPGNTYA----------NFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGL 241 (613)
Q Consensus 173 ~~d~d~~e~~l~l~d~~~~~~~~-~~~~~~~~----------~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~ 241 (613)
.+++|. |++|+++||++..... .+...... ..+..++.++|||+....+ ..+.+.|++|+
T Consensus 163 ~~~~D~-e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~--------~~~~l~v~~Ge 233 (336)
T 1oe1_A 163 PLHYDR-AYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT--------GANALTAKVGE 233 (336)
T ss_dssp BCCCSE-EEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS--------GGGCEEEETTC
T ss_pred cccCCc-eeEeeeeeeeeccccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCC--------CCcceEcCCCC
Confidence 345554 7899999999853211 11110000 1134678999999986221 12789999999
Q ss_pred EEEEEEEecCCCCCcEE-EEEeceeeEEEEeCCccccee--eeeEEEEccceeeeecccEEEEccCCccC-----c---C
Q psy4302 242 RHRFRIIGGSCLACPML-FFVEKHRMNLITVDGTPVQPQ--MFDSITIFPGQYTPVNSAIVLNINLDAAH-----M---G 310 (613)
Q Consensus 242 ~~rlRliN~~~~~~~~~-~~i~gh~~~via~DG~~v~P~--~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-----~---~ 310 (613)
||||+..+++. .++ +.|++|.|+|++ ||.+++|. .++++.|+||||+ ||+|++++++.. . .
T Consensus 234 rvRlin~~~~~---~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~----dvlv~~~~pG~y~~~~h~~~~~ 305 (336)
T 1oe1_A 234 TVLLIHSQANR---DTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAG----AALYTFKQPGVYAYLNHNLIEA 305 (336)
T ss_dssp EEEEEEEESSS---CBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEE----EEEEECCSCEEEEEEESSHHHH
T ss_pred EEEEEecCCCC---ccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcE----EEEEEcCCCceEEEEechhhcc
Confidence 88765444443 333 346999999997 99999854 4689999999999 999999997652 1 1
Q ss_pred CCCceeEEEEecc
Q psy4302 311 SRRDRLNILRLRK 323 (613)
Q Consensus 311 ~~~~~~ail~Y~~ 323 (613)
......|+++|.+
T Consensus 306 ~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 306 FELGAAGHIKVEG 318 (336)
T ss_dssp HTTSCEEEEEEES
T ss_pred ccCCCeEEEEECC
Confidence 2445678999986
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.4e-39 Score=343.03 Aligned_cols=264 Identities=15% Similarity=0.137 Sum_probs=198.6
Q ss_pred CCceEEEEEEEeEeeecccccccCCCCCccccccceeecCCCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCce
Q psy4302 18 KPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVV 97 (613)
Q Consensus 18 ~~~~c~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~ 97 (613)
.+.+.+|+|++.+.. ..+.+||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +
T Consensus 35 ~~~~~~~~l~~~~~~--------------------~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~ 90 (340)
T 2bw4_A 35 GPRVVEFTMTIEEKK--------------------LVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----T 90 (340)
T ss_dssp SCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----T
T ss_pred CCcEEEEEEEEEEEE--------------------EEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----C
Confidence 467889999998754 2245679999999999999999999999999999999998 5
Q ss_pred eEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCc----ccccCCceeeEEEeCCCCCC-CCCC
Q psy4302 98 TIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIG----FQKMDGLEGPLVIRRPKKAD-PNRD 172 (613)
Q Consensus 98 tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~----~q~~~Gl~G~liV~~~~~~~-p~~~ 172 (613)
++||||+++.+....||.+.++| |+||++++|+|+++++||||||||.. .|+.+||+|+|||++++... ....
T Consensus 91 ~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~ 168 (340)
T 2bw4_A 91 NTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQ 168 (340)
T ss_dssp CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSC
T ss_pred CCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCC
Confidence 78999998876544455555664 99999999999999999999999975 69999999999999764321 1111
Q ss_pred CCCCCCCceEEEEeeeccCC-CCcccCCCCC----------CCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCc
Q psy4302 173 QYDTDYPSHTIIITDWLHGM-TDAKFPGNTY----------ANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGL 241 (613)
Q Consensus 173 ~~d~d~~e~~l~l~d~~~~~-~~~~~~~~~~----------~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~ 241 (613)
+.++|. |.+|+++||++.. ....+..... ...+..++.++|||+.+-. ...+.++|++|+
T Consensus 169 p~~~d~-e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~--------~~~~~l~v~~G~ 239 (340)
T 2bw4_A 169 PLTYDK-IYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGAL--------TGDHALTAAVGE 239 (340)
T ss_dssp EECCSE-EEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTT--------SGGGCEEEETTC
T ss_pred CcCcce-eEEEeeeeeeeccccCCcccccccccccccchhhHhhcCCCCEEEECCccCCc--------cCCCceEcCCCC
Confidence 234443 7889999999842 1111111000 0013467899999998610 113789999999
Q ss_pred EEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccc-ee-eeeEEEEccceeeeecccEEEEccCCccC-----c---CC
Q psy4302 242 RHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQ-PQ-MFDSITIFPGQYTPVNSAIVLNINLDAAH-----M---GS 311 (613)
Q Consensus 242 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~-~~d~l~l~pgeR~~~~~dv~v~a~~~~~~-----~---~~ 311 (613)
+|||+++|++...+ ++ ++++|.|+|++ ||.++. |. .++++.|.||||+ ||+|++++++.. . ..
T Consensus 240 r~Rl~n~~~~~~~~-~~-~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~----~v~v~~~~pG~y~~~~h~~~~h~ 312 (340)
T 2bw4_A 240 RVLVVHSQANRDTR-PH-LIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAG----AAFYTFRQPGVYAYVNHNLIEAF 312 (340)
T ss_dssp EEEEEEEESSSCBC-EE-EETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEE----EEEEECCSCEEEEEEESSHHHHH
T ss_pred EEEEEECCCCCccc-eE-EecCcceEEeC-CCcccCCccccceEEEeCCCceE----EEEEECCCCeeeEEEcCchHHHH
Confidence 99888877765532 33 38999999997 999886 43 5899999999999 999999997552 1 12
Q ss_pred CCceeEEEEecc
Q psy4302 312 RRDRLNILRLRK 323 (613)
Q Consensus 312 ~~~~~ail~Y~~ 323 (613)
.....|+++|.+
T Consensus 313 ~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 313 ELGAAGHFKVTG 324 (340)
T ss_dssp TTSCEEEEEEES
T ss_pred hCCCEEEEEECC
Confidence 334568899986
No 34
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1e-40 Score=346.18 Aligned_cols=211 Identities=18% Similarity=0.244 Sum_probs=154.8
Q ss_pred EeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCc----ccCCCCCCCCCccc--cccCCCCCeEEEEEee
Q psy4302 62 RPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVY----QRHTPHSDGVPLLT--QCPIIPETTYRYKFPA 135 (613)
Q Consensus 62 ~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~----~~~~~~~DGv~~vt--q~pI~pG~~~~Y~f~~ 135 (613)
++.+++| ++|||+|+|++||+|+|+|+|.|. ++++|||||++ +.+.+++||+++++ ||+|+||++|+|+|++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCC-CcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 4556789 689999999999999999999997 89999999999 44455555555555 7999999999999999
Q ss_pred cCC----------CceEEeecCcc--cccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCCCCC
Q psy4302 136 MPY----------GTFFYHSHIGF--QKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYA 203 (613)
Q Consensus 136 ~~~----------GT~wyH~H~~~--q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~~~~ 203 (613)
++. ||||||||... |+.+||+|+|||+++.+.+....+++.|. |++|+++||....+ +.
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~-e~~l~~~d~d~~~~---~~----- 197 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEK-QHVLMFAVFDESKS---WN----- 197 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCC-CCCCBCCEEETTSS---SS-----
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccc-eEEEEEEecccccc---cc-----
Confidence 653 79999999876 88999999999998754433222334443 78999999853211 10
Q ss_pred CCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeE
Q psy4302 204 NFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDS 283 (613)
Q Consensus 204 ~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~ 283 (613)
...++.++|||+.. ...|.++|++|++|||||+|++.....+.|+||||.|.+ || ..+|+
T Consensus 198 --~~~~~~~~ING~~~----------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dt 257 (306)
T 1sdd_A 198 --QTSSLMYTVNGYVN----------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISA 257 (306)
T ss_dssp --CCCCEEECSSSCCS----------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSC
T ss_pred --cCCCcceeeCCEec----------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcce
Confidence 12467899999986 224678999999999999999976324458899999985 87 45899
Q ss_pred EEEccceeeeecccEEEEccCCcc
Q psy4302 284 ITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 284 l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
+.|.||||+ ||+|++++++.
T Consensus 258 v~l~pger~----~v~~~~~~pG~ 277 (306)
T 1sdd_A 258 ITLVSATST----TANMTVSPEGR 277 (306)
T ss_dssp CCEETTCCB----C--------CC
T ss_pred EEECCCcEE----EEEEEcCCCeE
Confidence 999999999 99999998765
No 35
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=9.5e-39 Score=363.90 Aligned_cols=216 Identities=18% Similarity=0.251 Sum_probs=161.2
Q ss_pred CCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccc--------cccCCCCCeEEEEEeecC--
Q psy4302 68 NRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLT--------QCPIIPETTYRYKFPAMP-- 137 (613)
Q Consensus 68 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vt--------q~pI~pG~~~~Y~f~~~~-- 137 (613)
|+++|||+|+|++||+|+|+|+|.|+ ++++|||||+++. ++|||+|+++ ||+|+||++|+|+|++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~ 139 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRS 139 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTT
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCccc
Confidence 66899999999999999999999998 8999999999986 5799999887 999999999999999976
Q ss_pred ----CC----ceEEeecCc--ccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEe------eeccCCCCcccCCCC
Q psy4302 138 ----YG----TFFYHSHIG--FQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIIT------DWLHGMTDAKFPGNT 201 (613)
Q Consensus 138 ----~G----T~wyH~H~~--~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~------d~~~~~~~~~~~~~~ 201 (613)
+| |||||||.. .|+.+||+|+|||+++........ .+.+..|++|+++ ||+++..........
T Consensus 140 gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~-~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~ 218 (647)
T 1sdd_B 140 GPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETN-MPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA 218 (647)
T ss_dssp SCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSC-CCSSCCEEEEEEEEEEGGGSSCCC----------
T ss_pred CCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccC-CCCcceeEEEEEEeecCccccccccCcccccccC
Confidence 58 999999995 689999999999998854322111 1222348999999 676654322111111
Q ss_pred CCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeee
Q psy4302 202 YANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMF 281 (613)
Q Consensus 202 ~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~ 281 (613)
.......++.++|||+.. +.+.+.|++|++|||||+|++.....+.|++|||.|+||+.|| ..+
T Consensus 219 ~~~~~~~~~~~~iNG~~~-----------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~ 282 (647)
T 1sdd_B 219 SSEVKNSHEFHAINGMIY-----------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQL 282 (647)
T ss_dssp -----CCCEEEEETTBSS-----------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEE
T ss_pred CcchhhcCceeccCCEec-----------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----ccc
Confidence 111234578899999975 1378999999999999999997533688999999999999886 478
Q ss_pred eEEEEccceeeeecccEEEEccCCcc
Q psy4302 282 DSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 282 d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
|++.|.||||+ ||+|++++++.
T Consensus 283 d~v~l~pg~r~----~v~~~~~~pG~ 304 (647)
T 1sdd_B 283 GVWPLLPGSFK----TLEMKASKPGW 304 (647)
T ss_dssp SSEEECTTEEE----EEEEECCSSEE
T ss_pred ceEEECCCeEE----EEEEEeccceE
Confidence 99999999999 99999999865
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=2.3e-38 Score=363.55 Aligned_cols=215 Identities=15% Similarity=0.209 Sum_probs=169.4
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeec----------CCC
Q psy4302 70 RLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAM----------PYG 139 (613)
Q Consensus 70 ~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~----------~~G 139 (613)
++|||+|+|++||+|+|+|+|+|+ ++++|||||+++..... ||+++ +||+|+||++|+|+|++. ++|
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCCCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 689999999999999999999998 89999999999987653 69998 999999999999999998 899
Q ss_pred ceEEeecCcc--cccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEee------eccCCCCcccCCCCC---C---CC
Q psy4302 140 TFFYHSHIGF--QKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITD------WLHGMTDAKFPGNTY---A---NF 205 (613)
Q Consensus 140 T~wyH~H~~~--q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d------~~~~~~~~~~~~~~~---~---~~ 205 (613)
|||||||... |+.+||+|+|||+++....+....... ..|++|++++ |+++.....+..... . ..
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~-d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~ 350 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVT-VQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTF 350 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCS-SEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSS
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCcc-ceEEEEEEeecCccccchhccchhhcccCccccccCCccc
Confidence 9999999976 789999999999988543322111112 2478887654 555433222111000 0 00
Q ss_pred CCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEE
Q psy4302 206 GTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSIT 285 (613)
Q Consensus 206 ~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~ 285 (613)
....+.++|||+.. ...+.+.|++|++|||||+|++.....+.|+||||.|+|++.||. .+|+|.
T Consensus 351 ~~~~~~~~ING~~~----------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~ 415 (770)
T 2r7e_B 351 KENYRFHAINGYIM----------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYN 415 (770)
T ss_dssp TTTSCEECTTSCTT----------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEE
T ss_pred cccCCccccCCccC----------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEE
Confidence 11245689999975 234678999999999999999865335778899999999999973 789999
Q ss_pred EccceeeeecccEEEEccCCcc
Q psy4302 286 IFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 286 l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
|.||||+ +|+|++++++.
T Consensus 416 l~Pg~~~----~v~~~ad~pG~ 433 (770)
T 2r7e_B 416 LYPGVFE----TVEMLPSKAGI 433 (770)
T ss_dssp CCTTCCC----EEEECCSSCBC
T ss_pred ECCCeEE----EEEEEeCCCCc
Confidence 9999999 99999999876
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.5e-35 Score=323.73 Aligned_cols=239 Identities=20% Similarity=0.225 Sum_probs=189.4
Q ss_pred CCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCC-CCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeec
Q psy4302 58 DGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIV-DRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAM 136 (613)
Q Consensus 58 dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~-~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~ 136 (613)
+|..+.+|+|||++|||+|+|++||+++|+|+|.+. ...++|||||+. .+||+|..+| |.||++++|.|+++
T Consensus 179 ~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~~--i~pG~~~~~~~~~~ 251 (447)
T 2dv6_A 179 DNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFTQ--TDPGEETVVTFKAL 251 (447)
T ss_dssp TTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGCC--BCTTCEEEEEEECC
T ss_pred CCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccEE--eCCCCEEEEEEECC
Confidence 688889999999999999999999999999999985 357999999985 3799987764 99999999999999
Q ss_pred CCCceEEeecCc---ccccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCC---CCCCCCCCCCc
Q psy4302 137 PYGTFFYHSHIG---FQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPG---NTYANFGTRTE 210 (613)
Q Consensus 137 ~~GT~wyH~H~~---~q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~---~~~~~~~~~~~ 210 (613)
++||||||||.. .|..+||+|+|+|+++.. .| .+ |. |.+++++||++......... ......+..++
T Consensus 252 ~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-~P---~~--d~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 324 (447)
T 2dv6_A 252 IPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-LP---QV--DR-EFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPE 324 (447)
T ss_dssp SCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC-SC---CC--SE-EEEEEEEEECBSSCTTCCEECCBBHHHHHTTCCS
T ss_pred CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC-CC---CC--Ce-eEEEEecccccCCcccccccccCChHHhhccCCC
Confidence 999999999974 688899999999987632 12 23 32 67899999997643111000 00001123467
Q ss_pred ceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccce-e-eeeEEEEcc
Q psy4302 211 SFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQP-Q-MFDSITIFP 288 (613)
Q Consensus 211 ~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P-~-~~d~l~l~p 288 (613)
.++|||+.+... ..+.+.|++|++|||||+|++.. ..+.|+|+||.|+||+.||.+++| . .+|++.|.|
T Consensus 325 ~~~iNG~~~~~~--------~~~~~~v~~g~~vrlrliN~~~~-~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~p 395 (447)
T 2dv6_A 325 YFLFNGSVGSLT--------RSHPLYASVGETVRIFFGVGGPN-FTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPP 395 (447)
T ss_dssp EEEETTSTTCCC--------CCCCEEECTTCEEEEEEEEEESS-CCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECT
T ss_pred EEEECCcccCCC--------CCcceEECCCCEEEEEEEeCCCC-ceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECC
Confidence 899999987211 12478999999999999999965 378899999999999999999874 4 589999999
Q ss_pred ceeeeecccEEEEccCCccC-------cCCCCceeEEEEecc
Q psy4302 289 GQYTPVNSAIVLNINLDAAH-------MGSRRDRLNILRLRK 323 (613)
Q Consensus 289 geR~~~~~dv~v~a~~~~~~-------~~~~~~~~ail~Y~~ 323 (613)
|||+ +|+|++++++.. ........|+++|.+
T Consensus 396 g~r~----~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 396 GGAT----IVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDG 433 (447)
T ss_dssp TEEE----EEEEECCSCEEEEEEESSGGGGGGTCCEEEEECS
T ss_pred CcEE----EEEEECCCCEEEEEEecCcCccccCCEEEEEEeC
Confidence 9999 999999997651 122334478999985
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=6.7e-36 Score=342.56 Aligned_cols=214 Identities=21% Similarity=0.249 Sum_probs=163.9
Q ss_pred CCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCC-----CCCccccccCCCCCeEEEEEeecC-C---
Q psy4302 68 NRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSD-----GVPLLTQCPIIPETTYRYKFPAMP-Y--- 138 (613)
Q Consensus 68 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~D-----Gv~~vtq~pI~pG~~~~Y~f~~~~-~--- 138 (613)
...+|||+|++++||+|+|+|+|+|+ ++++|||||+++. ++|+| |+++++||+|+||++|+|+|++.+ +
T Consensus 446 ~~g~pGP~Ir~~~GD~v~v~~~N~l~-~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg 523 (742)
T 2r7e_A 446 ESGILGPLLYGEVGDTLLIIFKNQAS-RPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPT 523 (742)
T ss_dssp SSCSCCCCCCCBTTCEEECCEECCSS-SCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCC
T ss_pred ccCCCCCeEEEECCCEEEEEEEeCCC-CCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCc
Confidence 34689999999999999999999998 8999999999985 56776 567789999999999999999974 3
Q ss_pred ------CceEEeecCcc--cccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEeee------ccCCCCcccCCCCCCC
Q psy4302 139 ------GTFFYHSHIGF--QKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDW------LHGMTDAKFPGNTYAN 204 (613)
Q Consensus 139 ------GT~wyH~H~~~--q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~------~~~~~~~~~~~~~~~~ 204 (613)
||||||||... |+.+||+|+|||+++...++...+++.|. |++|++++| ++......+.......
T Consensus 524 ~~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~-E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v 602 (742)
T 2r7e_A 524 KSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDK-RNVILFSVFDENRSWYLTENIQRFLPNPAGV 602 (742)
T ss_dssp SSSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSC-CCEEEECBCCGGGSSCSHHHHHHHSSSSSCS
T ss_pred ccCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCc-eEEEEeeccccccccccccchhhcccCchhc
Confidence 49999999864 67999999999998865444443455554 789999754 4321111111000000
Q ss_pred --C----CCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccce
Q psy4302 205 --F----GTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQP 278 (613)
Q Consensus 205 --~----~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P 278 (613)
. ......++|||+.. ...+ +.+++|++|||||+|++.....+.|+|+||.|+|+ |
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~----------~~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~ 663 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVF----------DSLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------M 663 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCS----------SCCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------S
T ss_pred ccccccccccCceeeecCcCC----------CCCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------c
Confidence 0 01123479999976 1123 78999999999999988643346778999999987 4
Q ss_pred eeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 279 QMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 279 ~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
..+|+|.|.||||+ +|+|.++++|.
T Consensus 664 ~~~Dtv~l~Pg~~~----~v~~~ad~pG~ 688 (742)
T 2r7e_A 664 VYEDTLTLFPFSGE----TVFMSMENPGL 688 (742)
T ss_dssp SSBCSSCCCCCSSE----ECCEECCCCCC
T ss_pred cceeEEEECCCcEE----EEEEEcCCCeE
Confidence 68999999999999 99999998866
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.93 E-value=1.8e-25 Score=229.61 Aligned_cols=234 Identities=17% Similarity=0.174 Sum_probs=158.1
Q ss_pred CCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccceeeeeEEEEc
Q psy4302 208 RTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIF 287 (613)
Q Consensus 208 ~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~d~l~l~ 287 (613)
....|++||+.- .|.++++.|+++++|+.|.... +..+++||.. ..+.||.+.. +...|.
T Consensus 53 ~~~~~~~ng~~p------------gP~i~~~~Gd~v~v~~~N~~~~--~~~iH~HG~~--~~~~DG~p~~----~~~~i~ 112 (288)
T 3gdc_A 53 IFKGWSYNGRIP------------GPTLWAREGDALRIHFTNAGAH--PHTIHFHGVH--RATMDGTPGI----GAGSIA 112 (288)
T ss_dssp EEEEEEETTBSS------------CCEEEEETTCEEEEEEEECSSS--CBCCEESSCC--CGGGSCCTTS----TTCSBC
T ss_pred EEEEEEECCccC------------CCcEEEeCCCEEEEEEEeCCCC--cccEEecccc--ccccCCCCCc----cceeEC
Confidence 456899999853 4899999999999999999875 5666688875 4578997642 345689
Q ss_pred cceeeeecccEEEEccCCccCcCCCCceeEEEEecccCCCCCC-CCCCCCCCCcccccCcCCCCCCccccccCCCCceEE
Q psy4302 288 PGQYTPVNSAIVLNINLDAAHMGSRRDRLNILRLRKSLNALDS-SDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRL 366 (613)
Q Consensus 288 pgeR~~~~~dv~v~a~~~~~~~~~~~~~~ail~Y~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~pd~~~ 366 (613)
|||++ ++.+++++++. .-|.....+... ...+. ...+.+.+- .....+++.+
T Consensus 113 PG~~~----~y~f~~~~~Gt-----------~~yH~H~~~~~~~~~~Gl-~G~liV~~~-----------~~~~~~d~e~ 165 (288)
T 3gdc_A 113 PGQSF----TYEFDATPFGT-----------HLYHCHQSPLAPHIAKGL-YGGFIVEPK-----------EGRPPADDEM 165 (288)
T ss_dssp TTCEE----EEEEECCSCEE-----------EEEECCCSSHHHHHHTTC-EEEEEEECS-----------SCCCCCSEEE
T ss_pred CCCEE----EEEEEcCCCcc-----------EEEEecCcchHHHHhCcC-eEEEEEeCC-----------ccCCCCcceE
Confidence 99999 99999976554 222211000000 00000 000000000 0001234555
Q ss_pred EEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccCCccccCCcc
Q psy4302 367 VFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKL 446 (613)
Q Consensus 367 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (613)
.+.+.-...+. ......+.|||..|.+.
T Consensus 166 ~l~~~d~~~~~------------------g~~~~~~~iNG~~~~~~---------------------------------- 193 (288)
T 3gdc_A 166 VMVMNGYNTDG------------------GDDNEFYSVNGLPFHFM---------------------------------- 193 (288)
T ss_dssp EEEEEEECCSS------------------TTCCSEEEETTSTTHHH----------------------------------
T ss_pred EEEEeeEecCC------------------CCCcceEEECccccccc----------------------------------
Confidence 55443221110 11123578898776310
Q ss_pred ceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCC
Q psy4302 447 CECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQP 526 (613)
Q Consensus 447 ~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p 526 (613)
...+.++.|++|+|+|+|. +. .+..||||||||.|+|++.+.. +..+
T Consensus 194 ---~~~l~v~~Ge~vr~~l~N~-g~-~~~~H~fHlhG~~f~v~~~g~~----------------------------~~~~ 240 (288)
T 3gdc_A 194 ---DFPVKVKQHELVRIHLINV-LE-YDPINSFHIHGNFFHYYPTGTM----------------------------LTPS 240 (288)
T ss_dssp ---HSCEEEETTCCEEEEEEEC-CC-SSSEEEEEETTCCEEEEETTCC----------------------------SSCS
T ss_pred ---CcccccCCCCEEEEEEEeC-CC-CCcceeEEEcCCEEEEEcCCCc----------------------------cCCC
Confidence 1236888999999999998 53 2346999999999999875431 1345
Q ss_pred CccceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 527 CVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 527 ~~kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
.++||+.|++++.+.|+|++++||.|+||||+++|++.|||..|+|.
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp EEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred ceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 89999999999999999999999999999999999999999999985
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.92 E-value=1.3e-24 Score=228.40 Aligned_cols=237 Identities=19% Similarity=0.229 Sum_probs=156.2
Q ss_pred CCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEe---CCcccceeeeeEE
Q psy4302 208 RTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITV---DGTPVQPQMFDSI 284 (613)
Q Consensus 208 ~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~d~l 284 (613)
....+++||+.- .|.++|++|+++|+||+|.... +. +||.|.+.+++. ||.+. +...
T Consensus 22 ~~~~~~~NG~~p------------GP~I~v~~Gd~v~v~v~N~l~~--~~--siH~HG~~~~~~~~~DGvp~----vtq~ 81 (339)
T 2zwn_A 22 DYKVFGFNGQVP------------GPLIHVQEGDDVIVNVTNNTSL--PH--TIHWHGVHQKGTWRSDGVPG----VTQQ 81 (339)
T ss_dssp EEEEEEETTBSS------------CCEEEEETTCEEEEEEEEESSS--CB--CCEEETCCCTTCGGGSCCBT----TTBC
T ss_pred EEEEEEECCccC------------CCeEEEECCCEEEEEEEECCCC--Cc--cEEeCCCCcCCCcccCCCCc----cccC
Confidence 456899999842 3899999999999999999864 33 477777888875 99863 2345
Q ss_pred EEccceeeeecccEEEEccCCccC------c---CCC-CceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCcc
Q psy4302 285 TIFPGQYTPVNSAIVLNINLDAAH------M---GSR-RDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEK 354 (613)
Q Consensus 285 ~l~pgeR~~~~~dv~v~a~~~~~~------~---~~~-~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 354 (613)
.|.||||+ ++.+++++++.. . ... ....+.+-... ....
T Consensus 82 ~I~PG~~~----~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p----~~~~----------------------- 130 (339)
T 2zwn_A 82 PIEAGDSY----TYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDP----KQPL----------------------- 130 (339)
T ss_dssp CBCTTCEE----EEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEEC----SSCC-----------------------
T ss_pred ccCCCCeE----EEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecC----CCcc-----------------------
Confidence 69999999 999999876552 0 011 11111111110 0000
Q ss_pred ccccCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCC
Q psy4302 355 ATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRS 434 (613)
Q Consensus 355 ~~~~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~ 434 (613)
.+....+..+.+.+.-........... . .........+.|||..+..
T Consensus 131 --~~~~~~d~e~~l~l~d~~~~~~~~~~~-----~---g~~~~~~~~~~ING~~~~~----------------------- 177 (339)
T 2zwn_A 131 --PIEKRVTKDVIMMMSTWESAVADKYGE-----G---GTPMNVADYFSVNAKSFPL----------------------- 177 (339)
T ss_dssp --TTGGGCSEEEEEEEEEECGGGTTCTTC-----C---CSTTSCCCEEEETTBCTTS-----------------------
T ss_pred --cccccCCceEEEEeeheecccccccCC-----C---CCCccccceEEEccccCCC-----------------------
Confidence 000112333333332111110000000 0 0000012246677765410
Q ss_pred ccCCccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhcc
Q psy4302 435 VCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLARE 514 (613)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~ 514 (613)
...+.++.|++++|+|+|. + ...||||||||+|+|++.++.
T Consensus 178 ---------------~~~~~v~~G~~vrlrliN~-~---~~~h~~hlhGh~f~vi~~DG~-------------------- 218 (339)
T 2zwn_A 178 ---------------TQPLRVKKGDVVKIRFFGA-G---GGIHAMHSHGHDMLVTHKDGL-------------------- 218 (339)
T ss_dssp ---------------SCCEEECTTCEEEEEEEEC-S---SSCEEEEETTCCEEEEEETTE--------------------
T ss_pred ---------------cccEEECCCCEEEEEEEeC-C---CceEEEEECCcEEEEEEeCCe--------------------
Confidence 1247889999999999999 5 359999999999999998641
Q ss_pred CCCCCCCCCCCCCccceEEcCCCcEEEEEEEecCcceeEEeechhhh------hhcCceEEEEecc
Q psy4302 515 GPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFH------TETGMNTVFQVGD 574 (613)
Q Consensus 515 ~~~~~~~n~~~p~~kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H------~~~GM~~~~~V~~ 574 (613)
++.+|.++||+.|++|+++.|+|++||||.|+||||+++| ...||+.+|.+..
T Consensus 219 -------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 219 -------PLDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp -------EEEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred -------ecCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 0133779999999999999999999999999999999999 7889999998864
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.91 E-value=5.3e-24 Score=221.52 Aligned_cols=239 Identities=19% Similarity=0.230 Sum_probs=157.3
Q ss_pred CcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEE-EEeCCcccceeeeeEEEEc
Q psy4302 209 TESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNL-ITVDGTPVQPQMFDSITIF 287 (613)
Q Consensus 209 ~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~d~l~l~ 287 (613)
...+++||+.- .|.++++.|+++++||.|.... +..++.||....- .+.||.+. +....|.
T Consensus 22 ~~~~~~ng~~p------------GP~i~~~~Gd~v~v~~~N~l~~--~~siH~HG~~~~~~~~~DG~p~----~t~~~i~ 83 (318)
T 3g5w_A 22 FHTFAFNGQVP------------APLIHVMEGDDVTVNVTNMTTL--PHTIHWHGMLQRGTWQSDGVPH----ATQHAIE 83 (318)
T ss_dssp EEEEEETTBSS------------CCEEEEETTCEEEEEEEECSSS--CBCCEEETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEEECCccC------------CceEEEeCCCEEEEEEEeCCCC--ceeEEecCcCCCCCcccCCCcc----cccccCC
Confidence 46899999753 4899999999999999999865 5676677775542 36899764 2235789
Q ss_pred cceeeeecccEEEEccCCccC-----cCCC-----CceeEEEEecccCCCCCCCCCCCCCCCcccccCcCCCCCCccccc
Q psy4302 288 PGQYTPVNSAIVLNINLDAAH-----MGSR-----RDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATV 357 (613)
Q Consensus 288 pgeR~~~~~dv~v~a~~~~~~-----~~~~-----~~~~ail~Y~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 357 (613)
|||++ +..+++++++.. .... ....+.|-... ... . .
T Consensus 84 PG~~~----~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~-----~~~-------------------~-----~ 130 (318)
T 3g5w_A 84 PGDTF----TYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEP-----KNP-------------------L-----P 130 (318)
T ss_dssp TTCEE----EEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEEC-----SSC-------------------C-----H
T ss_pred CCCEE----EEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcC-----CCc-------------------c-----c
Confidence 99999 999999876552 1000 01111121121 000 0 0
Q ss_pred cCCCCceEEEEEEeeeeeccCccccCCcccceeeeecCCCceeeEEecceeccCCCCCcccccCCCCCCCCCCCCCCccC
Q psy4302 358 LKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCG 437 (613)
Q Consensus 358 ~~~~pd~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~~ 437 (613)
.....+..+.+.+.-........... . .......-.+.|||+.+..
T Consensus 131 ~~~~~d~e~~l~l~dw~~~~~~~~~~-----~---~~~~~~~d~~~ING~~~~~-------------------------- 176 (318)
T 3g5w_A 131 IEKTVTKDYILMLSDWVSSWANKPGE-----G---GIPGDVFDYYTINAKSFPE-------------------------- 176 (318)
T ss_dssp HHHTCCEEEEEEEEEECGGGTTCTTC-----C---CCTTCCCCEEEETTBCBTS--------------------------
T ss_pred ccccccceeEEEEEeecccccccccc-----C---CCCCCcCcEEEEcCcCCCC--------------------------
Confidence 00112333433332111110000000 0 0001112247788876521
Q ss_pred CccccCCccceeeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCC
Q psy4302 438 KSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPD 517 (613)
Q Consensus 438 ~~~~~~~~~~~~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
+..+.++.|++|+|+|+|. +. ..||||||||.|+|+++++..
T Consensus 177 ------------~~~l~v~~G~~vrlrliN~-~~---~~h~~hlhGh~f~vi~~dG~~---------------------- 218 (318)
T 3g5w_A 177 ------------TQPIRVKKGDVIRLRLIGA-GD---HVHAIHTHGHISQIAFKDGFP---------------------- 218 (318)
T ss_dssp ------------SCCEEECTTCEEEEEEEEC-SS---SCEEEEETTSCEEEEEETTEE----------------------
T ss_pred ------------CccEEeCCCCEEEEEEEeC-CC---ceEEEEECCcEEEEEecCCcc----------------------
Confidence 1237889999999999999 53 489999999999999986510
Q ss_pred CCCCCCCCCCccceEEcCCCcEEEEEEEecCcceeEEeechhhhhh------cCceEEEEeccC
Q psy4302 518 LATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTE------TGMNTVFQVGDR 575 (613)
Q Consensus 518 ~~~~n~~~p~~kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~------~GM~~~~~V~~~ 575 (613)
+.+|.+|||+.|++++.+.|+|+|+|||.|+||||+++|++ .|||.+|++...
T Consensus 219 -----~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 219 -----LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp -----EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred -----cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 13477999999999999999999999999999999999998 578999998653
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.81 E-value=1.4e-21 Score=202.28 Aligned_cols=84 Identities=15% Similarity=0.233 Sum_probs=56.8
Q ss_pred EEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccceE
Q psy4302 453 IKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTV 532 (613)
Q Consensus 453 ~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDTv 532 (613)
+.++.|++++|+|+|. +.. ...||||||||.|.+ + +.++||+
T Consensus 217 l~v~~G~~vrlrliN~-g~~-~~~h~~hlhG~~~~~---------d---------------------------G~~~dtv 258 (306)
T 1sdd_A 217 ITVCAHDHISWHLIGM-SSG-PELFSIHFNGQVLEQ---------N---------------------------HHKISAI 258 (306)
T ss_dssp CCCCCC------BBCC-CSS-SCEECCBCSSTTCEE---------T---------------------------TEECSCC
T ss_pred eEEcCCCEEEEEEEeC-CCC-CccEEEEECCcEeee---------C---------------------------CEEcceE
Confidence 5677899999999998 531 247999999999875 1 1369999
Q ss_pred EcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEecc
Q psy4302 533 TIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 533 ~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
.|++|+.+.|+|.+++||.|+||||+++|++.||+.+|.|.+
T Consensus 259 ~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 259 TLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp CEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC----
T ss_pred EECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEec
Confidence 999999999999999999999999999999999999999864
No 43
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.80 E-value=4.6e-19 Score=201.73 Aligned_cols=88 Identities=17% Similarity=0.326 Sum_probs=78.0
Q ss_pred EEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccce
Q psy4302 452 IIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDT 531 (613)
Q Consensus 452 ~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDT 531 (613)
.+.++.|++|+|+|+|. +. ....||||||||.|+|++.+ +.++||
T Consensus 240 ~l~v~~G~~vrlrliN~-~~-~~~~h~~hlhG~~f~vi~~d---------------------------------~~~~d~ 284 (647)
T 1sdd_B 240 GLRMYEQEWVRLHLLNL-GG-SRDIHVVHFHGQTLLENGTQ---------------------------------QHQLGV 284 (647)
T ss_dssp CCEEETTCEEEEEEEEC-CC-TTCCEEEEETTCCEEECSSS---------------------------------CEEESS
T ss_pred CeEEcCCCEEEEEEEeC-CC-CCcceeEEEcCcEEEEecCC---------------------------------Ccccce
Confidence 46888999999999998 53 13489999999999997432 348999
Q ss_pred EEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEecc
Q psy4302 532 VTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 532 v~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
+.|++++.+.|+|++++||.|+||||+++|++.||+++|.|.+
T Consensus 285 v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 285 WPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred EEECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 9999999999999999999999999999999999999999963
No 44
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.74 E-value=3.9e-17 Score=170.50 Aligned_cols=92 Identities=16% Similarity=0.243 Sum_probs=81.1
Q ss_pred EEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccce
Q psy4302 452 IIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDT 531 (613)
Q Consensus 452 ~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDT 531 (613)
.+.++.|++++|+|+|. +. ...|+||||||.|+|++.++. +..|.++||
T Consensus 215 ~l~v~~G~~vRlRliN~-~~--~~~~~~~l~Gh~f~vi~~DG~----------------------------~~~p~~~d~ 263 (327)
T 1kbv_A 215 ALKAKAGETVRMYVGNG-GP--NLVSSFHVIGEIFDKVYVEGG----------------------------KLINENVQS 263 (327)
T ss_dssp CEEEETTEEEEEEEEEE-ES--SCCEEEEEETCCBSEEEGGGS----------------------------SCEECSBSE
T ss_pred eEEeCCCCEEEEEEECC-CC--CCceeEEEeCCEEEEEEcCCC----------------------------cCCCCceeE
Confidence 57899999999999998 53 358999999999999998762 122678999
Q ss_pred EEcCCCcEEEEEEEecCcceeEEeechhhhh-hcCceEEEEecc
Q psy4302 532 VTIPPNGYTVVRVHFNNPGIWIMHCHFIFHT-ETGMNTVFQVGD 574 (613)
Q Consensus 532 v~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~-~~GM~~~~~V~~ 574 (613)
+.|.+|+...|.|++++||.|+||||+.+|. ..||+.+|.+..
T Consensus 264 l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g 307 (327)
T 1kbv_A 264 TIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEG 307 (327)
T ss_dssp EEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEES
T ss_pred EEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECC
Confidence 9999999999999999999999999999995 889999999864
No 45
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.74 E-value=5e-19 Score=203.24 Aligned_cols=87 Identities=20% Similarity=0.333 Sum_probs=77.6
Q ss_pred EEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccce
Q psy4302 452 IIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDT 531 (613)
Q Consensus 452 ~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDT 531 (613)
.+.++.|++|+|+|+|. +. ....||||||||.|+|++.+. .++||
T Consensus 369 ~l~v~~Ge~vr~rliN~-g~-~~~~H~fHlhGh~f~Vv~~dg---------------------------------~~~Dt 413 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSM-GS-NENIHSIHFSGHVFTVRKKEE---------------------------------YKMAL 413 (770)
T ss_dssp CCCCCSSSCEEEECCCC-CS-SSCCCEEEBSSCCEECCSSSC---------------------------------CEESE
T ss_pred CeEEeCCCEEEEEEEeC-CC-CcceEEEEEcCCEEEEEecCC---------------------------------ceeeE
Confidence 46788999999999998 53 235899999999999986532 28999
Q ss_pred EEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 532 VTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 532 v~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
+.|++++++.|+|+|||||.|+||||+++|++.||+..|.|.
T Consensus 414 v~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 414 YNLYPGVFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp EECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred EEECCCeEEEEEEEeCCCCceEEEeccccccccccccccccc
Confidence 999999999999999999999999999999999999999883
No 46
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.74 E-value=9.5e-17 Score=168.64 Aligned_cols=91 Identities=19% Similarity=0.246 Sum_probs=75.2
Q ss_pred EEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCC-ccc
Q psy4302 452 IIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPC-VKD 530 (613)
Q Consensus 452 ~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~-~kD 530 (613)
.+.++.|++++|++.|. + ...|++|+|||.|+|++.|. . ...|. ++|
T Consensus 232 ~l~v~~G~r~Rl~n~~~-~---~~~~~~~i~gh~~~Vi~dG~---~-------------------------~~~p~~~~d 279 (340)
T 2bw4_A 232 ALTAAVGERVLVVHSQA-N---RDTRPHLIGGHGDYVWATGK---F-------------------------RNPPDLDQE 279 (340)
T ss_dssp CEEEETTCEEEEEEEES-S---SCBCEEEETCCEEEEETTCC---T-------------------------TSCCEEEES
T ss_pred ceEcCCCCEEEEEECCC-C---CccceEEecCcceEEeCCCc---c-------------------------cCCccccce
Confidence 47889999999888776 3 45789999999999985321 1 11232 479
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechh-hhhhcCceEEEEecc
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFI-FHTETGMNTVFQVGD 574 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~-~H~~~GM~~~~~V~~ 574 (613)
|+.|++|+.+.|.|.+++||.|+||||++ .|++.||++.|+|..
T Consensus 280 tv~l~pGer~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 280 TWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTG 324 (340)
T ss_dssp CCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred EEEeCCCceEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECC
Confidence 99999999999999999999999999999 599999999999974
No 47
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.69 E-value=1.2e-15 Score=159.75 Aligned_cols=91 Identities=15% Similarity=0.149 Sum_probs=71.8
Q ss_pred EEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCC-ccc
Q psy4302 452 IIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPC-VKD 530 (613)
Q Consensus 452 ~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~-~kD 530 (613)
.+.++.|++++|++.|. + ...|++++|||.|.|++.|. .. ..|. ++|
T Consensus 226 ~l~v~~Ger~Rl~n~~~-~---~~~~~h~i~~h~~~Vi~dG~---~~-------------------------~~p~~~~d 273 (333)
T 1mzy_A 226 ALKAKVGDNVLFVHSQP-N---RDSRPHLIGGHGDLVWETGK---FH-------------------------NAPERDLE 273 (333)
T ss_dssp CEEEETTCEEEEEEEES-S---SCBCEEEETCCEEEEETTCC---TT-------------------------SCCEEEES
T ss_pred ceEecCCCEEEEEECCC-C---CccccEEECCCCeEEEeCCc---cc-------------------------CCCccCcc
Confidence 47888999999888776 3 22344446778888886221 11 1132 589
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechhhhh-hcCceEEEEecc
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHT-ETGMNTVFQVGD 574 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~-~~GM~~~~~V~~ 574 (613)
|+.|++|+.+.|.|.|++||.|+||||++.|+ +.|||..|+|..
T Consensus 274 tv~l~pGer~~v~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 274 TWFIRGGTAGAALYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp BCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTCCEEEEEEES
T ss_pred eEEECCCceEEEEEEcCCCEEEEEecChhhhHhhCCCEEEEEEcC
Confidence 99999999999999999999999999999997 999999999975
No 48
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.64 E-value=3.8e-15 Score=162.08 Aligned_cols=215 Identities=14% Similarity=0.075 Sum_probs=139.4
Q ss_pred CeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEe-CCCcccCCCCCCCCCc-----cccccCCCCCeEEEE
Q psy4302 59 GVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHW-HGVYQRHTPHSDGVPL-----LTQCPIIPETTYRYK 132 (613)
Q Consensus 59 G~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHw-HGl~~~~~~~~DGv~~-----vtq~pI~pG~~~~Y~ 132 (613)
|.....++|||+. .|.|+|++| ++++||+|........+|+ ||..+.. ...||.+. +++..|.||+++++.
T Consensus 179 ~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i~~DG~~~~~P~~~~~l~l~pgeR~dvl 255 (451)
T 2uxt_A 179 GFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-ISGDQGFLPAPVSVKQLSLAPGERREIL 255 (451)
T ss_dssp CCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-EECSSSEEEEEEEESSEEECTTCEEEEE
T ss_pred CCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-EEeCCCccCCceEeceEEECceeEEEEE
Confidence 4455789999985 699999999 9999999999877899999 8976542 35899642 456789999999999
Q ss_pred EeecCCCceEEeecCcccccCCce------------eeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcccCCC
Q psy4302 133 FPAMPYGTFFYHSHIGFQKMDGLE------------GPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGN 200 (613)
Q Consensus 133 f~~~~~GT~wyH~H~~~q~~~Gl~------------G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~~~ 200 (613)
+++++.|+||++++........+. ..+-+.......+........+ ..+............
T Consensus 256 v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~L-------~~~~~~~~~~~~~~~ 328 (451)
T 2uxt_A 256 VDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRL-------LPTEIMAGSPIRSRD 328 (451)
T ss_dssp EECTTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCCSCS-------SSSCCCCCCCSEEEE
T ss_pred EEeCCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCcccc-------CCCCCCCCCCcceEE
Confidence 999999999999986433221111 1111111110000000000000 000000000000000
Q ss_pred CCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCccc---c
Q psy4302 201 TYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPV---Q 277 (613)
Q Consensus 201 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v---~ 277 (613)
+ ... ..|+|||+.+- .+.+.+.++.|++++|+|+|. . .+-||||||.|+|++.||.+. +
T Consensus 329 ~-~l~----~~~~iNg~~f~---------~~~~~~~~~~G~~~~~~l~N~--~--~HP~HLHGh~F~Vl~~~G~~~~~~~ 390 (451)
T 2uxt_A 329 I-SLG----DDPGINGQLWD---------VNRIDVTAQQGTWERWTVRAD--E--PQAFHIEGVMFQIRNVNGAMPFPED 390 (451)
T ss_dssp E-EEC----SSSSBTTBCCC---------TTCCCEEEETTCEEEEEEEEE--E--EEEEEETTCEEEEEEETTBCCCGGG
T ss_pred E-EEe----eEEEECCEeCC---------CCCCcEEcCCCCEEEEEEECC--C--CcCeEECCceEEEEeeCCcCCCccc
Confidence 0 000 05789999861 112468999999999999998 2 345669999999999999876 4
Q ss_pred eeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 278 PQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 278 P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
|..+|+|.| |+++ .|+|++++++.
T Consensus 391 p~~rDTv~v--g~~~----~i~~~~dnpg~ 414 (451)
T 2uxt_A 391 RGWKDTVWV--DGQV----ELLVYFGQPSW 414 (451)
T ss_dssp SSCBSEEEE--EEEE----EEEEECCSCCB
T ss_pred CCCccEEEE--CCEE----EEEEEeCCCCC
Confidence 789999999 9999 99999998875
No 49
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.63 E-value=1.4e-15 Score=165.13 Aligned_cols=221 Identities=14% Similarity=0.159 Sum_probs=149.0
Q ss_pred CeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc-----cccccCCCCCeEEEEE
Q psy4302 59 GVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL-----LTQCPIIPETTYRYKF 133 (613)
Q Consensus 59 G~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~-----vtq~pI~pG~~~~Y~f 133 (613)
|.....++|||+. .|.|+|++| ++++|++|........+|++|..+.. .+.||.+. +..-.|.||++++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-IAADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-EecCCCCCCCceEeceEEECCceeEEEEE
Confidence 4455689999997 699999999 99999999998778999999976543 35799763 3345799999999999
Q ss_pred eecCCCceEEeecCccc--cc-CCc--------------eeeEEEeCCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcc
Q psy4302 134 PAMPYGTFFYHSHIGFQ--KM-DGL--------------EGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAK 196 (613)
Q Consensus 134 ~~~~~GT~wyH~H~~~q--~~-~Gl--------------~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~ 196 (613)
+++++|+||++|+.... .. .|| ....+++-.....+.. ....+ ..+.++........
T Consensus 251 ~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~p~~l----~~~~~l~~~~~~r~ 324 (439)
T 2xu9_A 251 RLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLP--LPKAL----SPFPTLPAPVVTRR 324 (439)
T ss_dssp ECCSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCC--CCSCC----CCCCCCCCCSEEEE
T ss_pred EcCCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcccc--CcccC----CCcccCCCCCcceE
Confidence 99999999999984211 10 122 1222332211111100 00000 00000000000000
Q ss_pred cCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCccc
Q psy4302 197 FPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPV 276 (613)
Q Consensus 197 ~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v 276 (613)
+.-.. . ..+..|+|||+.+- .+.+.+.++.|++++|+|+|.+...| -||||||.|.|++.+|...
T Consensus 325 ~~l~~-~---~~g~~~~iNg~~~~---------~~~~~~~~~~g~~~~~~~~N~~~~~H--P~HLHG~~F~Vl~~~g~~~ 389 (439)
T 2xu9_A 325 LVLTE-D---MMAARFFINGQVFD---------HRRVDLKGQAQTVEVWEVENQGDMDH--PFHLHVHPFQVLSVGGRPF 389 (439)
T ss_dssp EEEEE-E---GGGTEEEETTBCCC---------TTCCCEEECTTCEEEEEEEECSSSCE--EEEESSCCBEEEEETTEEC
T ss_pred EEEEe-e---ccCceEeECCEECC---------CCCCceecCCCCEEEEEEEcCCCCCC--CceeCCCcEEEEeeCCCCC
Confidence 00000 0 01236889999861 11245889999999999999987655 4559999999999999876
Q ss_pred c-eeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 277 Q-PQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 277 ~-P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
. |..+|++.|.||+++ .|.++++++|.
T Consensus 390 ~~p~~rDTv~v~p~~~v----~i~f~adnpG~ 417 (439)
T 2xu9_A 390 PYRAWKDVVNLKAGEVA----RLLVPLREKGR 417 (439)
T ss_dssp SSCCCBSEEEECTTCEE----EEEEECCSCEE
T ss_pred CCCCCeEEEEeCCCCEE----EEEEEcCCCCC
Confidence 4 889999999999999 99999998876
No 50
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.62 E-value=4e-15 Score=161.80 Aligned_cols=94 Identities=18% Similarity=0.277 Sum_probs=81.5
Q ss_pred EEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccce
Q psy4302 452 IIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDT 531 (613)
Q Consensus 452 ~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kDT 531 (613)
.+.++.|+++.|+|+|. +. ...|+|||||+.|.|++.++. . ..|.+.|+
T Consensus 205 ~l~v~~G~~vrlrliN~-~~--~~~~~~~i~g~~~~vi~~DG~-~---------------------------~~p~~~~~ 253 (442)
T 2zoo_A 205 SLTAKVGETVRLYIGNG-GP--NLVSSFHVIGEIFDTVYVEGG-S---------------------------LKNHNVQT 253 (442)
T ss_dssp CEEEETTCEEEEEEEEE-ES--SCCEEEEEETCCBSEEEGGGS-S---------------------------CEECSBSE
T ss_pred ceEeCCCCEEEEEEEeC-CC--CCceeeEEcCCEEEEEecCCc-c---------------------------CCCccceE
Confidence 47889999999999998 52 368999999999999998752 1 12678999
Q ss_pred EEcCCCcEEEEEEEecCcceeEEeechhhh-hhcCceEEEEeccCC
Q psy4302 532 VTIPPNGYTVVRVHFNNPGIWIMHCHFIFH-TETGMNTVFQVGDRK 576 (613)
Q Consensus 532 v~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H-~~~GM~~~~~V~~~~ 576 (613)
+.|.+|+...|.|.+++||.|.+|||...| ...||+..|.|...+
T Consensus 254 ~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 254 TLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 999999999999999999999999999999 589999999986543
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.59 E-value=7.1e-14 Score=146.41 Aligned_cols=91 Identities=15% Similarity=0.176 Sum_probs=72.4
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCC--c
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPC--V 528 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~--~ 528 (613)
..+.++.|++++|+..+. + ...+++++|||.|.|++ ++ .. ..|+ +
T Consensus 225 ~~l~v~~GervRlin~~~-~---~~~~~~~i~gh~~~Vi~-DG--~~--------------------------~~p~~~~ 271 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQA-N---RDTRPHLIGGHGDWVWE-TG--KF--------------------------ANPPQRD 271 (336)
T ss_dssp GCEEEETTCEEEEEEEES-S---SCBCEEETTCCEEEEET-TC--CT--------------------------TSCCEEE
T ss_pred cceEcCCCCEEEEEecCC-C---CccceEEECCcCceEeC-CC--cC--------------------------cCCcccc
Confidence 357889999998866555 2 23566667999999985 22 11 1232 5
Q ss_pred cceEEcCCCcEEEEEEEecCcceeEEeechhhhh-hcCceEEEEecc
Q psy4302 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHT-ETGMNTVFQVGD 574 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~-~~GM~~~~~V~~ 574 (613)
+||+.|++|+...+.|.+++||.|+||||.+.|. +.||+++|.|..
T Consensus 272 ~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 272 LETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp ESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred ceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECC
Confidence 7999999999999999999999999999999986 999999999964
No 52
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.54 E-value=1.7e-15 Score=131.08 Aligned_cols=89 Identities=19% Similarity=0.307 Sum_probs=71.8
Q ss_pred CCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCC--CCCCCCCccccccCCCCCeEEEEEee-cCCCceEEee
Q psy4302 69 RRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHT--PHSDGVPLLTQCPIIPETTYRYKFPA-MPYGTFFYHS 145 (613)
Q Consensus 69 g~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~--~~~DGv~~vtq~pI~pG~~~~Y~f~~-~~~GT~wyH~ 145 (613)
-+|++|+|+|++||+|+ ++|... .++++||||...+.. ..+||.+ .+++.|.||++++|.|++ +++|+|||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~-~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C 89 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKL-PPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYC 89 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSS-CCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEEC
T ss_pred cEEeCCEEEEcCCCEEE--EEECCC-CCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEe
Confidence 36788999999999985 679876 799999999865421 0123332 356789999999999998 6999999999
Q ss_pred cCcccccCCceeeEEEeC
Q psy4302 146 HIGFQKMDGLEGPLVIRR 163 (613)
Q Consensus 146 H~~~q~~~Gl~G~liV~~ 163 (613)
| .+...||.|.|+|++
T Consensus 90 ~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 90 A--PHRGAGMVGKITVEG 105 (105)
T ss_dssp T--TTGGGTCEEEEEECC
T ss_pred C--CchhcCCEEEEEEcC
Confidence 9 677889999999964
No 53
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.52 E-value=2.6e-14 Score=145.53 Aligned_cols=99 Identities=21% Similarity=0.388 Sum_probs=85.2
Q ss_pred EEECCCC--CCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCC--------ccccccCCCCCeEEEEEe
Q psy4302 65 LTINRRL--PSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVP--------LLTQCPIIPETTYRYKFP 134 (613)
Q Consensus 65 ~~iNg~~--PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~--------~vtq~pI~pG~~~~Y~f~ 134 (613)
|+|||+. ++|.|++++||+|+++|.|... ..+++||||...... .+|.. ....+.|.||++++|.|+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~ 233 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQII 233 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCC-cceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEE
Confidence 6899998 8999999999999999999987 799999999765432 34431 234567999999999999
Q ss_pred ec---CCCceEEeecCcccccCCceeeEEEeCCCC
Q psy4302 135 AM---PYGTFFYHSHIGFQKMDGLEGPLVIRRPKK 166 (613)
Q Consensus 135 ~~---~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~ 166 (613)
++ ++|+||||||...+...||.|.|+|.+++.
T Consensus 234 ~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 234 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 97 699999999999999999999999998754
No 54
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.49 E-value=4.1e-13 Score=148.06 Aligned_cols=234 Identities=13% Similarity=0.138 Sum_probs=147.9
Q ss_pred EeEEEECCCCC--------CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCCeE
Q psy4302 62 RPILTINRRLP--------SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPETTY 129 (613)
Q Consensus 62 ~~~~~iNg~~P--------GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~~~ 129 (613)
...++|||+.. .|.|+|++|+++++||+|........+|++|..+.. ...||.+. +..-.|.||+++
T Consensus 165 ~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 165 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-EeccCccccccccCeEEEcccceE
Confidence 45789999853 289999999999999999998778899999976543 35899752 234468999999
Q ss_pred EEEEeecC-CCceEEeecCc--cc-----ccCCceeeEEEe-CCCCCCCCCCCCCCCCCceEEEEeeeccCCCC-cccCC
Q psy4302 130 RYKFPAMP-YGTFFYHSHIG--FQ-----KMDGLEGPLVIR-RPKKADPNRDQYDTDYPSHTIIITDWLHGMTD-AKFPG 199 (613)
Q Consensus 130 ~Y~f~~~~-~GT~wyH~H~~--~q-----~~~Gl~G~liV~-~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~-~~~~~ 199 (613)
+..+++++ +|+||.+++.. .+ ...|+..+++.. ......|........ . .+.++...... .....
T Consensus 244 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~---~--~l~~~~l~p~~~~~~p~ 318 (503)
T 1hfu_A 244 SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP---A--QLNEADLHALIDPAAPG 318 (503)
T ss_dssp EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC---C--BCCGGGCBBSSSCSCSS
T ss_pred EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc---C--CCccccccccCccCCCC
Confidence 99999986 79999999853 11 223343344433 221111211100000 0 00011000000 00000
Q ss_pred -----C----CCCCCCCCCcceeecCcccccCCC--------CC----CCCCccceEEEeCCcEEEEEEEe-cCCCCCcE
Q psy4302 200 -----N----TYANFGTRTESFLINGRSVFKSGN--------GT----SNPVPYSKFKVNKGLRHRFRIIG-GSCLACPM 257 (613)
Q Consensus 200 -----~----~~~~~~~~~~~~lING~~~~~~~~--------~~----~~~~~~~~~~v~~G~~~rlRliN-~~~~~~~~ 257 (613)
. +.-..+.....|+|||+.+-.... +. ........+.++.|++++++|+| .....|
T Consensus 319 ~~~~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~H-- 396 (503)
T 1hfu_A 319 IPTPGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPH-- 396 (503)
T ss_dssp CSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCC--
T ss_pred cccCCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCC--
Confidence 0 000000011268899998621110 00 00112467899999999999995 444445
Q ss_pred EEEEeceeeEEEEeCCccc----ceeeeeEEEE-ccceeeeecccEEEEccCCcc
Q psy4302 258 LFFVEKHRMNLITVDGTPV----QPQMFDSITI-FPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 258 ~~~i~gh~~~via~DG~~v----~P~~~d~l~l-~pgeR~~~~~dv~v~a~~~~~ 307 (613)
-||||||.|.|++.+|... .|..+|++.| .||+++ .|.|+++++|.
T Consensus 397 P~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v----~irf~adnPG~ 447 (503)
T 1hfu_A 397 PFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEV----TIRFVTDNPGP 447 (503)
T ss_dssp EEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEE----EEEEECCSCEE
T ss_pred CEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceE----EEEEEcCCCee
Confidence 4559999999999998752 5899999999 899999 99999999887
No 55
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.49 E-value=4.4e-13 Score=148.42 Aligned_cols=236 Identities=14% Similarity=0.111 Sum_probs=147.8
Q ss_pred EeEEEECCCCC---------CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCCe
Q psy4302 62 RPILTINRRLP---------SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPETT 128 (613)
Q Consensus 62 ~~~~~iNg~~P---------GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~~ 128 (613)
...++|||+.. -|.|+|++|+++++||+|........+|++|..+.. ...||.+. +..-.|.||++
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 45789999853 189999999999999999998778899999976543 35899752 33456999999
Q ss_pred EEEEEeecC-CCceEEeecCcc---cccCCceeeEEEe-CCCCCCCCCCCCC-CCCCceEE-EEeeeccCC-----CCcc
Q psy4302 129 YRYKFPAMP-YGTFFYHSHIGF---QKMDGLEGPLVIR-RPKKADPNRDQYD-TDYPSHTI-IITDWLHGM-----TDAK 196 (613)
Q Consensus 129 ~~Y~f~~~~-~GT~wyH~H~~~---q~~~Gl~G~liV~-~~~~~~p~~~~~d-~d~~e~~l-~l~d~~~~~-----~~~~ 196 (613)
++..+++++ +|+||.+++... ....|+..+++.. .....+|.....+ ..+.+..+ .+....... ....
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~ 349 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADI 349 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSE
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceE
Confidence 999999986 699999998532 1223443344433 2221112111100 00000000 000000000 0000
Q ss_pred cCCCCCCCCCCCCcceeecCcccccCCC--------C----CCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEece
Q psy4302 197 FPGNTYANFGTRTESFLINGRSVFKSGN--------G----TSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKH 264 (613)
Q Consensus 197 ~~~~~~~~~~~~~~~~lING~~~~~~~~--------~----~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh 264 (613)
.. .+..........|.|||+.+-.... + .......+.+.++.|++++++|+| ...|++| ||||
T Consensus 350 ~~-~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~~~HP~H--LHGh 424 (521)
T 1v10_A 350 NL-NLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--GGNHPFH--LHGH 424 (521)
T ss_dssp EE-ECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--CBSCEEE--ESSC
T ss_pred EE-EEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--CCCCCEE--Eccc
Confidence 00 0000000111268899988621110 0 000112467899999999999999 3345555 9999
Q ss_pred eeEEEEeCCcc----cceeeeeEEEE-ccceeeeecccEEEEccCCcc
Q psy4302 265 RMNLITVDGTP----VQPQMFDSITI-FPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 265 ~~~via~DG~~----v~P~~~d~l~l-~pgeR~~~~~dv~v~a~~~~~ 307 (613)
.|.|++.+|.. ..|..+|++.| .||+++ .|.|+++++|.
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v----~Irf~aDNPG~ 468 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNV----TFRFVTDNPGP 468 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEE----EEEEECCSCEE
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEE----EEEEEeCCCee
Confidence 99999999875 35899999999 799999 99999999887
No 56
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.44 E-value=2.9e-12 Score=139.81 Aligned_cols=221 Identities=16% Similarity=0.207 Sum_probs=146.8
Q ss_pred CeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc-----cccccCCCCCeEEEEE
Q psy4302 59 GVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL-----LTQCPIIPETTYRYKF 133 (613)
Q Consensus 59 G~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~-----vtq~pI~pG~~~~Y~f 133 (613)
|.....++|||+. .|.|.|++|+ ++||+|....+...+|++|..... .+.||... +..-.|.||++++..+
T Consensus 208 g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-Ia~DGg~~~~P~~~~~l~l~pgeR~dvlv 283 (481)
T 3zx1_A 208 GREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-VGTDGGLIEKTIYKEELFLSPASRVEVLI 283 (481)
T ss_dssp CCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-EEETTEEEEEEEEESSEEECTTCEEEEEE
T ss_pred CCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-EEcCCCccCCceEeCeEEECCccEEEEEE
Confidence 3345689999996 5899999999 999999998888999999987543 46897431 3455799999999999
Q ss_pred eecCCCceEEeecCcccccCCce--------eeEEEe--CCCCCCCC-C---CCCCCCCCceEEEEeeeccCCCCcccCC
Q psy4302 134 PAMPYGTFFYHSHIGFQKMDGLE--------GPLVIR--RPKKADPN-R---DQYDTDYPSHTIIITDWLHGMTDAKFPG 199 (613)
Q Consensus 134 ~~~~~GT~wyH~H~~~q~~~Gl~--------G~liV~--~~~~~~p~-~---~~~d~d~~e~~l~l~d~~~~~~~~~~~~ 199 (613)
++.+.|++..-++.... +|+. -.+.++ .....-|. . ...+.....+.+.++..... + .
T Consensus 284 ~~~~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~-----~-~ 355 (481)
T 3zx1_A 284 DAPKDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQ-----M-H 355 (481)
T ss_dssp ECSSCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCST-----T-T
T ss_pred EcCCCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchh-----c-c
Confidence 99998888777754221 1110 111121 11100010 0 00111111223333221100 0 0
Q ss_pred CCCCCCCCC------CcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEe--
Q psy4302 200 NTYANFGTR------TESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITV-- 271 (613)
Q Consensus 200 ~~~~~~~~~------~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~-- 271 (613)
.+... +.. ...|+|||+.+- ...+.+.++.|++++|+|+|.+.. .+-|+||||.|.|++.
T Consensus 356 ~~~~~-~~~~~~~~~~~~~~iNG~~~~---------~~~~~~~~~~G~~v~w~l~N~~~~--~Hp~HlHG~~F~vl~~~~ 423 (481)
T 3zx1_A 356 GMMGK-SEGELKIALASMFLINRKSYD---------LKRIDLSSKLGVVEDWIVINKSHM--DHPFHIHGTQFELISSKL 423 (481)
T ss_dssp TGGGC-CHHHHHHHHHTTEEETTBCCC---------TTCCCEEEETTCCEEEEEEECSSS--CEEEEETTCCEEEEEEEE
T ss_pred ccccc-ccccccccccceeEECCEeCC---------CCCceEEeCCCCEEEEEEEcCCCC--ceeEEEeccEEEEEEecc
Confidence 00000 000 124999999871 123678999999999999998866 4566699999999999
Q ss_pred CCcccc---eeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 272 DGTPVQ---PQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 272 DG~~v~---P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
+|.... +...|+|.|.|||++ .|.++++++|.
T Consensus 424 ~g~~~~~~~~~~kDTv~v~Pg~~~----~i~~~~d~pG~ 458 (481)
T 3zx1_A 424 NGKVQKAEFRALRDTINVRPNEEL----RLRMKQDFKGL 458 (481)
T ss_dssp TTEEEECSSCCEESEEEECTTCEE----EEEECCCSCEE
T ss_pred cCCCCCcccCcccceEEECCCCEE----EEEEEcCCCee
Confidence 998763 678999999999999 99999988876
No 57
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.42 E-value=2.4e-13 Score=125.88 Aligned_cols=98 Identities=16% Similarity=0.218 Sum_probs=73.2
Q ss_pred eEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCC------CCccc-cccCCCCC--eEE
Q psy4302 60 VERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDG------VPLLT-QCPIIPET--TYR 130 (613)
Q Consensus 60 ~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DG------v~~vt-q~pI~pG~--~~~ 130 (613)
...+-+.++|. |+|+|+|++||+|+++++|... ...|++.+.+.++++.+. .++.. .-.|.||+ +++
T Consensus 48 ~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 48 FPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK---GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp SCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT---TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CccccccccCC-CCCEEEEeCCCEEEEEEEcCCC---CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 33334555665 5799999999999999999732 346777776655544321 11100 01789999 999
Q ss_pred EEEeecCCCceEEeecCcccccCCceeeEEEe
Q psy4302 131 YKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 131 Y~f~~~~~GT~wyH~H~~~q~~~Gl~G~liV~ 162 (613)
|.|++ ++||||||||...|..+||+|.|+|+
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99999 99999999999999999999999984
No 58
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.37 E-value=2.3e-11 Score=133.38 Aligned_cols=236 Identities=16% Similarity=0.158 Sum_probs=147.2
Q ss_pred EEeEEEECCCC---------CCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCC
Q psy4302 61 ERPILTINRRL---------PSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPET 127 (613)
Q Consensus 61 ~~~~~~iNg~~---------PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~ 127 (613)
....++|||+- +-|.|+|++|+++++||+|........+|++|..+.. ...||.+- +..-.|.||+
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCce
Confidence 35689999973 3478999999999999999887677899999976543 35899742 2345699999
Q ss_pred eEEEEEeecC-CCceEEeecCc--c-cccCCceeeEEEeCC-CCCCCCCCCCCCCCCceEEEEeeeccCCCCcc-cCC--
Q psy4302 128 TYRYKFPAMP-YGTFFYHSHIG--F-QKMDGLEGPLVIRRP-KKADPNRDQYDTDYPSHTIIITDWLHGMTDAK-FPG-- 199 (613)
Q Consensus 128 ~~~Y~f~~~~-~GT~wyH~H~~--~-q~~~Gl~G~liV~~~-~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~-~~~-- 199 (613)
+++..+++++ .|.||.++... . ....|...+++.... ....|.......+. .. +.+......... ...
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~--~~--~~~~~L~p~~~~~~p~~~ 321 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT--KC--LIETDLHPLSRNGVPGNP 321 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS--SB--CCGGGCCBSSCCCCSSCS
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc--cc--cccccccccccccCCCcc
Confidence 9999999986 59999998742 1 122233233333322 11122111100000 00 001110000000 000
Q ss_pred ---C----CCCCCCCCCcceeecCcccccCCC--------C-C---CCCCccceEEEeCCcEEEEEEE-ecCCCCCcEEE
Q psy4302 200 ---N----TYANFGTRTESFLINGRSVFKSGN--------G-T---SNPVPYSKFKVNKGLRHRFRII-GGSCLACPMLF 259 (613)
Q Consensus 200 ---~----~~~~~~~~~~~~lING~~~~~~~~--------~-~---~~~~~~~~~~v~~G~~~rlRli-N~~~~~~~~~~ 259 (613)
. +.-..+.....|.|||+.+..... + . ........+.++.|++++|.|. |.....|+ |
T Consensus 322 ~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP--~ 399 (495)
T 3t6v_A 322 HQGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHP--F 399 (495)
T ss_dssp STTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCE--E
T ss_pred CCCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcc--e
Confidence 0 000000112368899987632110 0 0 0011235789999999999998 66655455 5
Q ss_pred EEeceeeEEEEeCCccc----ceeeeeEEEEcc-ceeeeecccEEEEccCCcc
Q psy4302 260 FVEKHRMNLITVDGTPV----QPQMFDSITIFP-GQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 260 ~i~gh~~~via~DG~~v----~P~~~d~l~l~p-geR~~~~~dv~v~a~~~~~ 307 (613)
|||||.|.|++.+|... .|..+|++.|.+ |+.+ .|.|+++++|.
T Consensus 400 HLHGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~----~irf~adnPG~ 448 (495)
T 3t6v_A 400 HLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNV----TIRFCTDNPGP 448 (495)
T ss_dssp EETTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEE----EEEEECCSCEE
T ss_pred eecCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEE----EEEEEcCCCee
Confidence 59999999999988654 589999999997 9999 99999999987
No 59
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.3e-11 Score=136.93 Aligned_cols=238 Identities=14% Similarity=0.061 Sum_probs=144.6
Q ss_pred EeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCCeEEEEEeecC
Q psy4302 62 RPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPETTYRYKFPAMP 137 (613)
Q Consensus 62 ~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~~~~Y~f~~~~ 137 (613)
...++|||+. .|.|+|++|+++++||+|........+|++|..+.. ...||++. +..-.|.||++++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4588999986 699999999999999999998778899999976543 35799752 23456999999999999974
Q ss_pred --CCceEEeecCccccc------CCceeeEEEeCCCCC-CCCCC---CCCCCCCceEEE-Eeeecc-CCCCccc-CCCCC
Q psy4302 138 --YGTFFYHSHIGFQKM------DGLEGPLVIRRPKKA-DPNRD---QYDTDYPSHTII-ITDWLH-GMTDAKF-PGNTY 202 (613)
Q Consensus 138 --~GT~wyH~H~~~q~~------~Gl~G~liV~~~~~~-~p~~~---~~d~d~~e~~l~-l~d~~~-~~~~~~~-~~~~~ 202 (613)
.|.||..+....... ....+..|++-.... .+... .+...+.+..+. +..... ......+ .....
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 579999987532211 112222333321111 11100 000000000000 000000 0000000 00000
Q ss_pred CCCCCCCcceeecCcccccCCC---------CC-CCC-----CccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeE
Q psy4302 203 ANFGTRTESFLINGRSVFKSGN---------GT-SNP-----VPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMN 267 (613)
Q Consensus 203 ~~~~~~~~~~lING~~~~~~~~---------~~-~~~-----~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~ 267 (613)
.........++|||+.+-.... +. ..+ .....+.++.|++++|.|.|.+...| -||||||.|.
T Consensus 325 ~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~H--P~HLHGh~F~ 402 (534)
T 1zpu_A 325 DNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTH--PFHLHGHAFQ 402 (534)
T ss_dssp EECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSSCE--EEEETTCCEE
T ss_pred eccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCCCC--CeEecCCceE
Confidence 0001122357899987521100 00 000 01346899999999999999987654 5559999999
Q ss_pred EEEeCCc--------------------ccceeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 268 LITVDGT--------------------PVQPQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 268 via~DG~--------------------~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
|++.++. ...|..+|++.|.||+.+ .|.|+++++|.
T Consensus 403 Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v----~IrF~aDNPG~ 458 (534)
T 1zpu_A 403 TIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNF----VIRFKADNPGV 458 (534)
T ss_dssp EEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEE----EEEEECCSCEE
T ss_pred EEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEE----EEEEEeCCCee
Confidence 9998853 124789999999999999 99999999887
No 60
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.35 E-value=1.3e-11 Score=135.37 Aligned_cols=235 Identities=15% Similarity=0.186 Sum_probs=145.8
Q ss_pred EEeEEEECCCC--------CCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCCe
Q psy4302 61 ERPILTINRRL--------PSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPETT 128 (613)
Q Consensus 61 ~~~~~~iNg~~--------PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~~ 128 (613)
....++|||+- +-|.|+|++|+++++||+|........+|++|..+.. ...||.+- +..-.|.||++
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcE
Confidence 34689999973 3479999999999999999987777899999977543 45899752 23346999999
Q ss_pred EEEEEeecC-CCceEEeecCc--ccc-cCCceeeEEEe-CCCCCCCCCCCCCCCCCceEEEEeeeccCCCCcc-cCC---
Q psy4302 129 YRYKFPAMP-YGTFFYHSHIG--FQK-MDGLEGPLVIR-RPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAK-FPG--- 199 (613)
Q Consensus 129 ~~Y~f~~~~-~GT~wyH~H~~--~q~-~~Gl~G~liV~-~~~~~~p~~~~~d~d~~e~~l~l~d~~~~~~~~~-~~~--- 199 (613)
++..+++++ .|.||..+... .+. ..|..-+++.. .....+|..... .+. .. +.+......... ...
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~-~~~--~~--~~~~~L~p~~~~~~p~~~~ 318 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQT-TSV--KP--LNEVDLHPLVSTPVPGAPS 318 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCC-CCS--SB--CCGGGCCBSSCCCCSSCSS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCC-CCC--cc--cccccccccccccCCCccc
Confidence 999999986 59999998642 111 12222233322 221112211100 000 00 001110000000 000
Q ss_pred --C----CCCCCCCCCcceeecCcccccCCC---------CC---CCCCccceEEEeCCcEEEEEEE---ecCCCCCcEE
Q psy4302 200 --N----TYANFGTRTESFLINGRSVFKSGN---------GT---SNPVPYSKFKVNKGLRHRFRII---GGSCLACPML 258 (613)
Q Consensus 200 --~----~~~~~~~~~~~~lING~~~~~~~~---------~~---~~~~~~~~~~v~~G~~~rlRli---N~~~~~~~~~ 258 (613)
. +.-........|.|||+.+..... .. ......+.+.++.|++++|.|. |.....|+
T Consensus 319 ~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP-- 396 (499)
T 3pxl_A 319 SGGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHP-- 396 (499)
T ss_dssp TTCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCE--
T ss_pred CCCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCcc--
Confidence 0 000000112368899987632110 00 0012245789999999999999 55555454
Q ss_pred EEEeceeeEEEEeCCccc----ceeeeeEEEEcc---ceeeeecccEEEEccCCcc
Q psy4302 259 FFVEKHRMNLITVDGTPV----QPQMFDSITIFP---GQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 259 ~~i~gh~~~via~DG~~v----~P~~~d~l~l~p---geR~~~~~dv~v~a~~~~~ 307 (613)
||||||.|.|++.+|... .|..+|++.|.+ |+.+ .|.|+++++|.
T Consensus 397 ~HLHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~----~irf~adnPG~ 448 (499)
T 3pxl_A 397 FHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNV----TIRFDTNNPGP 448 (499)
T ss_dssp EEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEE----EEEEECCSCEE
T ss_pred ceecCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEE----EEEEEcCCCce
Confidence 559999999999888643 589999999986 9999 99999999987
No 61
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.33 E-value=1.9e-11 Score=132.73 Aligned_cols=205 Identities=15% Similarity=0.111 Sum_probs=134.2
Q ss_pred CeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEe--CC---CcccCCCCCCCCCc-----cccccCCCCCe
Q psy4302 59 GVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHW--HG---VYQRHTPHSDGVPL-----LTQCPIIPETT 128 (613)
Q Consensus 59 G~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHw--HG---l~~~~~~~~DGv~~-----vtq~pI~pG~~ 128 (613)
|.....++|||+. .|.|+|++| ++++|+.|........+|+ +| ..+.. ...||.+. +..-.|.||++
T Consensus 166 ~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR 242 (448)
T 3aw5_A 166 GFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRL-IAVDQGFLARPIEVRALFLAPAER 242 (448)
T ss_dssp CCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEE-EEETTEEEEEEEEESCEEECTTCE
T ss_pred CccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEE-EEeCCCccCCceEeceEEECCcce
Confidence 3445689999986 599999999 9999999999877899999 77 44322 35799652 23456899999
Q ss_pred EEEEEeecCCCceEEeecCcccccCC-------------ceeeEEEe--CCCCCCCCCCCCCCC---C---CceEEEEee
Q psy4302 129 YRYKFPAMPYGTFFYHSHIGFQKMDG-------------LEGPLVIR--RPKKADPNRDQYDTD---Y---PSHTIIITD 187 (613)
Q Consensus 129 ~~Y~f~~~~~GT~wyH~H~~~q~~~G-------------l~G~liV~--~~~~~~p~~~~~d~d---~---~e~~l~l~d 187 (613)
++..++++ .|.||..++.......+ ....++++ ...........-+.. . ..+.+.+.
T Consensus 243 ~dvlv~~~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~- 320 (448)
T 3aw5_A 243 AEVVVELG-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS- 320 (448)
T ss_dssp EEEEEEEC-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE-
T ss_pred EEEEEECC-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe-
Confidence 99999987 47899988743211000 11122221 111000000000000 0 00111110
Q ss_pred eccCCCCcccCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEE-EeCCcEEEEEEEecC-CCCCcEEEEEecee
Q psy4302 188 WLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFK-VNKGLRHRFRIIGGS-CLACPMLFFVEKHR 265 (613)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~~-~~~~~~~~~i~gh~ 265 (613)
.....|+|||+.+-. ..+.+. ++.|++++|+|.|.+ ... +-||||||.
T Consensus 321 -------------------~~~~~~~iNg~~~~~---------~~p~~~~~~~g~~v~~~i~N~~~~~~--HP~HLHG~~ 370 (448)
T 3aw5_A 321 -------------------LSGMQWTINGMFWNA---------SNPLFEHVSVEGVELWEIVNDKASMP--HPMHLHGFP 370 (448)
T ss_dssp -------------------EETTEEEETTBCCCT---------TCTTCCCEEECEEEEEEEEECSSSCC--EEEEESSSC
T ss_pred -------------------CCCceeeECCCcCCC---------CCCceeccCCCCeEEEEEEcCCCCCC--cCEEECCce
Confidence 001248999998721 124567 899999999999998 554 555699999
Q ss_pred eEEEEeCCccc---------------ceeeeeEEEEccceeeeecccEEEEc
Q psy4302 266 MNLITVDGTPV---------------QPQMFDSITIFPGQYTPVNSAIVLNI 302 (613)
Q Consensus 266 ~~via~DG~~v---------------~P~~~d~l~l~pgeR~~~~~dv~v~a 302 (613)
|.|++.+|... +|..+|++.|.||+++ .|++++
T Consensus 371 F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~----~i~vrF 418 (448)
T 3aw5_A 371 MWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETV----KIVVNF 418 (448)
T ss_dssp BEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEE----EEEEEE
T ss_pred EEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEE----EEEEEe
Confidence 99999999764 2368999999999999 888444
No 62
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.32 E-value=7.4e-11 Score=128.73 Aligned_cols=230 Identities=16% Similarity=0.153 Sum_probs=141.4
Q ss_pred CeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEe-CCCcccCCCCCCCCCc-----cccccCCCCCeEEEE
Q psy4302 59 GVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHW-HGVYQRHTPHSDGVPL-----LTQCPIIPETTYRYK 132 (613)
Q Consensus 59 G~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHw-HGl~~~~~~~~DGv~~-----vtq~pI~pG~~~~Y~ 132 (613)
|.....++|||+. .|.+.+ +|+++++||+|........+++ +|..... ...||.+. ++.-.|.||++++..
T Consensus 180 g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v-Ia~DG~~l~~P~~~~~l~l~pGeR~dvl 256 (488)
T 3od3_A 180 GWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV-IASDGGLLPEPVKVSELPVLMGERFEVL 256 (488)
T ss_dssp CCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESCEEECTTCEEEEE
T ss_pred CCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE-EEeCCCcccCccEeceEEECCCCEEEEE
Confidence 3445689999986 588876 6789999999998877888888 6765332 35899532 345679999999999
Q ss_pred EeecCCCceEEeecCcccccCCc--ee----eEEEeCC---CCC-CCC-----CCCCCC-CCCceEEEEe--e-e-----
Q psy4302 133 FPAMPYGTFFYHSHIGFQKMDGL--EG----PLVIRRP---KKA-DPN-----RDQYDT-DYPSHTIIIT--D-W----- 188 (613)
Q Consensus 133 f~~~~~GT~wyH~H~~~q~~~Gl--~G----~liV~~~---~~~-~p~-----~~~~d~-d~~e~~l~l~--d-~----- 188 (613)
+++.+.++++.-+.........+ +. .+-|+.. ... -|. ...-+. ....+.+.+. . +
T Consensus 257 v~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~ 336 (488)
T 3od3_A 257 VEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGM 336 (488)
T ss_dssp EEECTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHH
T ss_pred EEeCCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccccc
Confidence 99998888888765321110000 01 1222211 001 010 000010 1112233221 0 0
Q ss_pred ------ccCCCCccc-----CCC-----CCC-CCCCC---CcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEE
Q psy4302 189 ------LHGMTDAKF-----PGN-----TYA-NFGTR---TESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRII 248 (613)
Q Consensus 189 ------~~~~~~~~~-----~~~-----~~~-~~~~~---~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRli 248 (613)
+........ ... ... ..+.. ...|+|||+.+- ...+.+.++.|+++||+|+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~---------~~~~~~~~~~G~~e~w~l~ 407 (488)
T 3od3_A 337 QMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFD---------MNKPMFAAAKGQYERWVIS 407 (488)
T ss_dssp HHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCC---------TTCCSEECCBSSCEEEEEE
T ss_pred ccccccccccccccccccccccccccCccccccccccccccceeeECCeeCC---------CCCCceEcCCCCEEEEEEE
Confidence 000000000 000 000 00001 124799999871 1236689999999999999
Q ss_pred ecCCCCCcEEEEEeceeeEEEEeCCcccc---eeeeeEEEEccceeeeecccEEEEccCCc
Q psy4302 249 GGSCLACPMLFFVEKHRMNLITVDGTPVQ---PQMFDSITIFPGQYTPVNSAIVLNINLDA 306 (613)
Q Consensus 249 N~~~~~~~~~~~i~gh~~~via~DG~~v~---P~~~d~l~l~pgeR~~~~~dv~v~a~~~~ 306 (613)
|.+... .+-||||||.|.|++.||.... +...|+|.|. ||++ .|++.+++++
T Consensus 408 N~~~~~-~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~----~i~~~f~~~~ 462 (488)
T 3od3_A 408 GVGDMM-LHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVS----EVLVKFNHDA 462 (488)
T ss_dssp CTTCCC-CEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEE----EEEECBCSCC
T ss_pred eCCCCC-CccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEE----EEEEEeccCC
Confidence 998432 4667799999999999998775 3579999999 9999 9999997654
No 63
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.31 E-value=7.5e-11 Score=131.54 Aligned_cols=238 Identities=12% Similarity=0.099 Sum_probs=142.3
Q ss_pred EeEEEECCCCC--------CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCCeE
Q psy4302 62 RPILTINRRLP--------SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPETTY 129 (613)
Q Consensus 62 ~~~~~iNg~~P--------GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~~~ 129 (613)
...++|||+.. -|.|.|++|+++++||+|........+|++|..+.. ...||.+. +..-.|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999973 378999999999999999998778899999976542 35799762 334569999999
Q ss_pred EEEEeecC-CCceEEeecC--ccc--ccCCc--eeeEEEeCCCCCCCCCCCCC-CC---CCceEEEEeeeccCCC-Cccc
Q psy4302 130 RYKFPAMP-YGTFFYHSHI--GFQ--KMDGL--EGPLVIRRPKKADPNRDQYD-TD---YPSHTIIITDWLHGMT-DAKF 197 (613)
Q Consensus 130 ~Y~f~~~~-~GT~wyH~H~--~~q--~~~Gl--~G~liV~~~~~~~p~~~~~d-~d---~~e~~l~l~d~~~~~~-~~~~ 197 (613)
+..+++++ .|.||..+.. ... ..... .+.|.........|...... .+ ..+.. +........ ...+
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~--l~p~~~~~~p~~~~ 351 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLD--VRPVVPRSVPVNSF 351 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSC--CCBSSCCBCCCTTC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccc--cccCCCCCCCCccc
Confidence 99999975 7899999875 211 01111 23333332221112111110 00 00000 000000000 0000
Q ss_pred CC------CCC-CCCCCCCcceeecCcccccCC-C--------C-CCCCCccceEEEeCCcEEEEEEEecCC----CCCc
Q psy4302 198 PG------NTY-ANFGTRTESFLINGRSVFKSG-N--------G-TSNPVPYSKFKVNKGLRHRFRIIGGSC----LACP 256 (613)
Q Consensus 198 ~~------~~~-~~~~~~~~~~lING~~~~~~~-~--------~-~~~~~~~~~~~v~~G~~~rlRliN~~~----~~~~ 256 (613)
.. .+. .........|+|||+.+.... . + .........+.+..++++++.++|... .. .
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~-~ 430 (559)
T 2q9o_A 352 VKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSL-P 430 (559)
T ss_dssp CCCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCC-C
T ss_pred ccceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCC-C
Confidence 00 000 001112346889998762110 0 0 000112345788877777776666633 22 4
Q ss_pred EEEEEeceeeEEEEeCC---------cc------------cceeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 257 MLFFVEKHRMNLITVDG---------TP------------VQPQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 257 ~~~~i~gh~~~via~DG---------~~------------v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
+-||||||.|.|++.++ +. ..|..+|++.|.+|+++ .|.|+++++|.
T Consensus 431 HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v----~IrF~adNPG~ 498 (559)
T 2q9o_A 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWL----LLAFRTDNPGA 498 (559)
T ss_dssp EEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEE----EEEEECCSCEE
T ss_pred CcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccE----EEEEEcCCCee
Confidence 56669999999999986 32 14779999999999999 99999999887
No 64
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.30 E-value=7.9e-11 Score=131.31 Aligned_cols=228 Identities=11% Similarity=0.044 Sum_probs=133.5
Q ss_pred eEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCCeEEEEEee-c-CCCceEEeecCc
Q psy4302 75 SIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPETTYRYKFPA-M-PYGTFFYHSHIG 148 (613)
Q Consensus 75 ~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~~~~Y~f~~-~-~~GT~wyH~H~~ 148 (613)
.|+|++|+++++||+|........+|++|..+.. ...||++. +....|.||++++..+++ + .+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 7999999999999999988778899999976543 35899642 334579999999999999 4 389999999864
Q ss_pred ccccCCce--eeEEEeCCCC-CCCCC--CCCC-CCCCceE--EEEeeec---c----CCCCcccCCCCCCCCCCCCccee
Q psy4302 149 FQKMDGLE--GPLVIRRPKK-ADPNR--DQYD-TDYPSHT--IIITDWL---H----GMTDAKFPGNTYANFGTRTESFL 213 (613)
Q Consensus 149 ~q~~~Gl~--G~liV~~~~~-~~p~~--~~~d-~d~~e~~--l~l~d~~---~----~~~~~~~~~~~~~~~~~~~~~~l 213 (613)
.-..+... +.|....... ..+.. .... .+..... ..+.... . ......+.-............|.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w~ 363 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWA 363 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETTEEEEE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCCeEEEE
Confidence 21111222 3333332221 11110 0000 0000000 0000000 0 00000000000000000122478
Q ss_pred ecCcccccCC-----------CC---------------CCC--------CCccceEEEeCCcEEEEEEEecCCCC----C
Q psy4302 214 INGRSVFKSG-----------NG---------------TSN--------PVPYSKFKVNKGLRHRFRIIGGSCLA----C 255 (613)
Q Consensus 214 ING~~~~~~~-----------~~---------------~~~--------~~~~~~~~v~~G~~~rlRliN~~~~~----~ 255 (613)
|||+.+.... .+ ..+ ......+.++.|++++|.|.|.+... -
T Consensus 364 iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~ 443 (552)
T 1aoz_A 364 INDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSE 443 (552)
T ss_dssp ETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCC
T ss_pred ECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCC
Confidence 8887652110 00 000 00124588999999999999987421 1
Q ss_pred cEEEEEeceeeEEEEeC-Ccc----------cceeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 256 PMLFFVEKHRMNLITVD-GTP----------VQPQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 256 ~~~~~i~gh~~~via~D-G~~----------v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
.+-||||||.|.|++.. |.+ ..|..+|++.|.+|+.+ .|.|+++++|.
T Consensus 444 ~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v----~Irf~aDNPG~ 502 (552)
T 1aoz_A 444 THPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWT----AIRFVADNPGV 502 (552)
T ss_dssp CEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEE----EEEEECCSCEE
T ss_pred CCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceE----EEEEEcCCCeE
Confidence 35566999999999984 542 34889999999999999 99999999987
No 65
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.28 E-value=7.2e-12 Score=131.29 Aligned_cols=99 Identities=22% Similarity=0.438 Sum_probs=82.2
Q ss_pred EEECCCC--CCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCC---C-----ccccccCCCCCeEEEEEe
Q psy4302 65 LTINRRL--PSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGV---P-----LLTQCPIIPETTYRYKFP 134 (613)
Q Consensus 65 ~~iNg~~--PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv---~-----~vtq~pI~pG~~~~Y~f~ 134 (613)
|+|||+. ..|.|+|++||+|+++|.|... ..+.+|+||...... .+|. | ......|.||++++|.|+
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~ 274 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQII 274 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEE
Confidence 6899986 4789999999999999999987 799999999874321 2332 1 113356999999999999
Q ss_pred e---cCCCceEEeecCcccccCCceeeEEEeCCCC
Q psy4302 135 A---MPYGTFFYHSHIGFQKMDGLEGPLVIRRPKK 166 (613)
Q Consensus 135 ~---~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~ 166 (613)
+ +++|+|+||||...+...||.|.|+|.+++.
T Consensus 275 ~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 275 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 6 6899999999999999999999999997744
No 66
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.26 E-value=3.6e-11 Score=105.15 Aligned_cols=93 Identities=25% Similarity=0.224 Sum_probs=73.1
Q ss_pred cCCCeEEeE-EEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEe
Q psy4302 56 TADGVERPI-LTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFP 134 (613)
Q Consensus 56 ~~dG~~~~~-~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~ 134 (613)
..+|..... ..+|++|++|.|+|++||+|++++.|... . +||+.... .|+ +..+.||++++|.|+
T Consensus 19 ~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~-~-----~H~~~i~~----~~~----~~~i~pG~~~~~~f~ 84 (112)
T 1iby_A 19 NVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSP-I-----SEGFSIDA----FGV----QEVIKAGETKTISFT 84 (112)
T ss_dssp EETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSS-S-----CEEEEEGG----GTE----EEEECTTCEEEEEEE
T ss_pred EeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCC-C-----eEEEEEcC----CCc----eeEeCCCCEEEEEEE
Confidence 345665555 48899999999999999999999999975 3 56665432 122 457999999999999
Q ss_pred ecCCCceEEeecCcccccCCceeeEEEeC
Q psy4302 135 AMPYGTFFYHSHIGFQKMDGLEGPLVIRR 163 (613)
Q Consensus 135 ~~~~GT~wyH~H~~~q~~~Gl~G~liV~~ 163 (613)
++++|+||||||.-.... +|.|.|+|.+
T Consensus 85 ~~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 85 ADKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp CCSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred CCCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 999999999998654333 3999999963
No 67
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.20 E-value=4.2e-11 Score=132.33 Aligned_cols=94 Identities=21% Similarity=0.265 Sum_probs=75.4
Q ss_pred CCeEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecC
Q psy4302 58 DGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMP 137 (613)
Q Consensus 58 dG~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~ 137 (613)
++++..+|++|++||+|.|+|++||+|+++|.|......+ +||+.... .|+ +..|.||++++|.|++++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv---~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL---THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC---CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc---eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 5678889999999999999999999999999998641111 35555432 222 257999999999999999
Q ss_pred CCceEEeecC---cccccCCceeeEEEeCC
Q psy4302 138 YGTFFYHSHI---GFQKMDGLEGPLVIRRP 164 (613)
Q Consensus 138 ~GT~wyH~H~---~~q~~~Gl~G~liV~~~ 164 (613)
+||||||||. ..| .||+|.|+|+++
T Consensus 566 pGtY~yhC~e~Cg~~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALH--MEMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTC--TTCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCc--cCCEEEEEEEcC
Confidence 9999999993 233 399999999865
No 68
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.18 E-value=7.2e-10 Score=124.07 Aligned_cols=229 Identities=14% Similarity=0.122 Sum_probs=139.2
Q ss_pred eEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCC-------cccCCCCCCCCCc-----cc------cc
Q psy4302 60 VERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGV-------YQRHTPHSDGVPL-----LT------QC 121 (613)
Q Consensus 60 ~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl-------~~~~~~~~DGv~~-----vt------q~ 121 (613)
.....++|||+. .|.|.|++| ++++||.|....+...+++.|. .+. -...||.+. +. .-
T Consensus 252 ~~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l 328 (612)
T 2g23_A 252 FFGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVL 328 (612)
T ss_dssp CCCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSE
T ss_pred CcCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEE
Confidence 345689999996 699999999 9999999999878888888775 111 124799642 22 45
Q ss_pred cCCCCCeEEEEEeecC-CCc-eEEeecCcccc------cC----CceeeEEEeCCCCCCCC---CCC------CCCCCCc
Q psy4302 122 PIIPETTYRYKFPAMP-YGT-FFYHSHIGFQK------MD----GLEGPLVIRRPKKADPN---RDQ------YDTDYPS 180 (613)
Q Consensus 122 pI~pG~~~~Y~f~~~~-~GT-~wyH~H~~~q~------~~----Gl~G~liV~~~~~~~p~---~~~------~d~d~~e 180 (613)
.|.||++++..+++.+ +|+ ++...-..... .+ +..=-|.|......++. ..+ ...+..+
T Consensus 329 ~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~ 408 (612)
T 2g23_A 329 SAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPH 408 (612)
T ss_dssp EECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCC
T ss_pred EECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccc
Confidence 7999999999999875 565 55554421110 00 11112445433212210 000 1111111
Q ss_pred --eEEEEee------------eccCC---CCc-ccCCC--CC-CCCCCCCcceeecCcccccCCCCCCCCCccceEEEeC
Q psy4302 181 --HTIIITD------------WLHGM---TDA-KFPGN--TY-ANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNK 239 (613)
Q Consensus 181 --~~l~l~d------------~~~~~---~~~-~~~~~--~~-~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~ 239 (613)
+.+++.. |.... ... .+... .. .........++|||+.+ ...+.+.++.
T Consensus 409 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~----------~~~~~~~v~~ 478 (612)
T 2g23_A 409 GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATF----------NDGLGFTIGE 478 (612)
T ss_dssp EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECST----------TSCCCEEEET
T ss_pred ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccC----------CCCCceEecC
Confidence 2222210 10000 000 00000 00 00001123588999987 2347899999
Q ss_pred CcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCc------------------------c---cceeeeeEEEEccceee
Q psy4302 240 GLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGT------------------------P---VQPQMFDSITIFPGQYT 292 (613)
Q Consensus 240 G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~------------------------~---v~P~~~d~l~l~pgeR~ 292 (613)
|++++|+|+|.+... +-||||||.|.|++.+|. + .++...|++.|.|||++
T Consensus 479 G~~v~w~l~N~~~~~--HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~ 556 (612)
T 2g23_A 479 GTHEQWTFLNLSPIL--HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGL 556 (612)
T ss_dssp TCEEEEEEEECSSSC--EEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEE
T ss_pred CCEEEEEEEeCCCCC--CCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEE
Confidence 999999999998664 556699999999987532 1 12347999999999999
Q ss_pred eecccEEEEcc-CCcc
Q psy4302 293 PVNSAIVLNIN-LDAA 307 (613)
Q Consensus 293 ~~~~dv~v~a~-~~~~ 307 (613)
.|.++++ ++|.
T Consensus 557 ----~i~~~~~~~pG~ 568 (612)
T 2g23_A 557 ----RVMGKFDGAYGR 568 (612)
T ss_dssp ----EEEEECCSCCEE
T ss_pred ----EEEEEeCCCCcc
Confidence 9999999 6655
No 69
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.15 E-value=6.7e-10 Score=122.70 Aligned_cols=213 Identities=13% Similarity=0.065 Sum_probs=133.1
Q ss_pred eEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCC-cccCCCCCCCCCc-----cccccCCCCCeEEEEE
Q psy4302 60 VERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGV-YQRHTPHSDGVPL-----LTQCPIIPETTYRYKF 133 (613)
Q Consensus 60 ~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl-~~~~~~~~DGv~~-----vtq~pI~pG~~~~Y~f 133 (613)
.....++|||+. .|.|.|+.| ++++|++|........+|+.|. .+.. ...||.+. +..-.|.||++++..+
T Consensus 228 ~~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv 304 (513)
T 2wsd_A 228 FCGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIII 304 (513)
T ss_dssp CCCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred cccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEE
Confidence 345789999986 699999875 9999999999877789999887 4322 35899532 3445799999999999
Q ss_pred eecC-CCceEEeecCcc----cccCCc-eeeEEEeCCCC-CCCCCCCCCCCC------------CceEEEEeeeccCCCC
Q psy4302 134 PAMP-YGTFFYHSHIGF----QKMDGL-EGPLVIRRPKK-ADPNRDQYDTDY------------PSHTIIITDWLHGMTD 194 (613)
Q Consensus 134 ~~~~-~GT~wyH~H~~~----q~~~Gl-~G~liV~~~~~-~~p~~~~~d~d~------------~e~~l~l~d~~~~~~~ 194 (613)
++++ +|.+ +.-.... ....+. ...+-++.... ..+........+ ..+.+.+....
T Consensus 305 ~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~----- 378 (513)
T 2wsd_A 305 DFTAYEGES-IILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ----- 378 (513)
T ss_dssp ECGGGTTCE-EEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE-----
T ss_pred ECCCCCCcE-EEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec-----
Confidence 9976 6763 3322111 000011 12232322210 101000000000 00111111100
Q ss_pred cccCCCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCc
Q psy4302 195 AKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGT 274 (613)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~ 274 (613)
.......++|||+.+- ....+.++.|++++|+|+|.+... +-||||||.|.|++.++.
T Consensus 379 ----------~~~g~~~~~iNg~~~~----------~~~~~~~~~g~~~~w~l~N~~~~~--HP~HlHG~~F~Vl~~~~~ 436 (513)
T 2wsd_A 379 ----------DEYGRPVLLLNNKRWH----------DPVTETPKVGTTEIWSIINPTRGT--HPIHLHLVSFRVLDRRPF 436 (513)
T ss_dssp ----------CTTSCEEEEETTBCTT----------SCCCBCCBTTCEEEEEEEECSSSC--EEEEESSCCEEEEEEEEB
T ss_pred ----------CCCCCceEeECCccCC----------CcccEecCCCCEEEEEEEcCCCCC--cCEeEeCceEEEEEecCc
Confidence 0001125789998861 124567899999999999998664 555699999999998752
Q ss_pred ---------------c------cceeeeeEEEEccceeeeecccEEEEc-cCCcc
Q psy4302 275 ---------------P------VQPQMFDSITIFPGQYTPVNSAIVLNI-NLDAA 307 (613)
Q Consensus 275 ---------------~------v~P~~~d~l~l~pgeR~~~~~dv~v~a-~~~~~ 307 (613)
+ -+|..+|++.|.||+++ .|++.+ +++|.
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~----~i~~~f~dnpG~ 487 (513)
T 2wsd_A 437 DIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVL----RIAATFGPYSGR 487 (513)
T ss_dssp CHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEE----EEEEECCSCCEE
T ss_pred ccccccccccccccCCCCCCCccccCcccEEEeCCCCEE----EEEEEecCCCCC
Confidence 1 12458999999999999 999999 55554
No 70
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.13 E-value=4.6e-10 Score=124.28 Aligned_cols=222 Identities=14% Similarity=0.104 Sum_probs=134.4
Q ss_pred EEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCC-------CcccCCCCCCCCCc-----cccccCCCCCe
Q psy4302 61 ERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHG-------VYQRHTPHSDGVPL-----LTQCPIIPETT 128 (613)
Q Consensus 61 ~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHG-------l~~~~~~~~DGv~~-----vtq~pI~pG~~ 128 (613)
....++|||+. .|.|.|+.| ++++||+|........++++| ..+. -...||... +..-.|.||++
T Consensus 200 ~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR 276 (534)
T 3abg_A 200 WGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAER 276 (534)
T ss_dssp CCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCE
T ss_pred cCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccE
Confidence 35689999985 799999985 999999999987778899976 2222 135798631 34567999999
Q ss_pred EEEEEeecC-CC-ceEEeecCcccccC-------CceeeEEEeCCCCC-CCCCCCCCCCCCceEEEEeeeccCCCCcccC
Q psy4302 129 YRYKFPAMP-YG-TFFYHSHIGFQKMD-------GLEGPLVIRRPKKA-DPNRDQYDTDYPSHTIIITDWLHGMTDAKFP 198 (613)
Q Consensus 129 ~~Y~f~~~~-~G-T~wyH~H~~~q~~~-------Gl~G~liV~~~~~~-~p~~~~~d~d~~e~~l~l~d~~~~~~~~~~~ 198 (613)
++..+++++ +| +||..+........ ...+.+-++..... .+.......++.... ..+ ........+.
T Consensus 277 ~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~-~~~~~~~~~~ 353 (534)
T 3abg_A 277 YEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPS-PTTNTPRQFR 353 (534)
T ss_dssp EEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCC-CCCCCCEEEE
T ss_pred EEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCC-CccccceEEE
Confidence 999999876 67 57766532100000 11122323222110 000000011110000 000 0000000000
Q ss_pred CCCCCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCCcEEEEEEEecCC-CCCcEEEEEeceeeEEEEe-CCc--
Q psy4302 199 GNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSC-LACPMLFFVEKHRMNLITV-DGT-- 274 (613)
Q Consensus 199 ~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~~i~gh~~~via~-DG~-- 274 (613)
+ ......|+|||+.+-.. .....+.++.|++++|.|.|.+. ..|++| ||||.|.|++. +|.
T Consensus 354 --~----~~~~~~w~iNG~~f~~~-------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~H--LHG~~F~Vl~~~~g~~~ 418 (534)
T 3abg_A 354 --F----GRTGPTWTINGVAFADV-------QNRLLANVPVGTVERWELINAGNGWTHPIH--IHLVDFKVISRTSGNNA 418 (534)
T ss_dssp --C----SCCCSTTCCCCBTTBCT-------TSCCCCEECTTCEEEEEEEECSSSCCCCEE--ESSCCEEEEEESSCCSS
T ss_pred --E----eccCceeEECCcccCCC-------CCcceeeccCCCEEEEEEEcCCCCCCcCEE--ECCeeEEEEEEcCCCCc
Confidence 0 01123689999987211 01134679999999999999874 356655 99999999998 663
Q ss_pred -cc---ceeeeeEEEEccceeeeecccEEEE-ccCCcc
Q psy4302 275 -PV---QPQMFDSITIFPGQYTPVNSAIVLN-INLDAA 307 (613)
Q Consensus 275 -~v---~P~~~d~l~l~pgeR~~~~~dv~v~-a~~~~~ 307 (613)
.. +...+|++.|.||+++ .|.+. ++++|.
T Consensus 419 ~~~~~~~~~~rDTV~v~pg~~v----~I~~~~adnpG~ 452 (534)
T 3abg_A 419 RTVMPYESGLKDVVWLGRRETV----VVEAHYAPFPGV 452 (534)
T ss_dssp SCCCSGGGSCBSEECCCSSEEE----EEEEECCSCCEE
T ss_pred CcCCccccCCcCeEEcCCCCEE----EEEEEECCCCcc
Confidence 11 1256899999999999 99998 788876
No 71
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.11 E-value=5.1e-09 Score=116.48 Aligned_cols=234 Identities=14% Similarity=0.079 Sum_probs=139.5
Q ss_pred eEEEECCCCC----------------CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----ccccc
Q psy4302 63 PILTINRRLP----------------SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCP 122 (613)
Q Consensus 63 ~~~~iNg~~P----------------GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~p 122 (613)
..++|||+.. .+.|.|++|+++++||+|........+|.+|..+.. ...||++- +..-.
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEE
Confidence 4578999742 379999999999999999988677899999987643 35799752 23446
Q ss_pred CCCCCeEEEEEeecC-CCceEEeecCcc-----cccCCceeeEEEeCCCCCCCCCCCCCCCCCceEEEEee--eccCCCC
Q psy4302 123 IIPETTYRYKFPAMP-YGTFFYHSHIGF-----QKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITD--WLHGMTD 194 (613)
Q Consensus 123 I~pG~~~~Y~f~~~~-~GT~wyH~H~~~-----q~~~Gl~G~liV~~~~~~~p~~~~~d~d~~e~~l~l~d--~~~~~~~ 194 (613)
|.|||+++..+++++ .|.||..+.... +......|.|.........|....++... .. +.+ .......
T Consensus 305 i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~--~~--~~~~~~~L~P~~ 380 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRG--TC--EDEPVASLVPHL 380 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCC--CS--CCSCGGGCCBSS
T ss_pred EccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccc--hh--hcccccccccCC
Confidence 899999999999975 789999987532 11111122322222211222222221110 00 000 0000000
Q ss_pred cc-cCCCCC-----CCCCCCCcceeecCcccccC-C--------CCCC-CCCccceEEE----eCCcEEEEEEEecC--C
Q psy4302 195 AK-FPGNTY-----ANFGTRTESFLINGRSVFKS-G--------NGTS-NPVPYSKFKV----NKGLRHRFRIIGGS--C 252 (613)
Q Consensus 195 ~~-~~~~~~-----~~~~~~~~~~lING~~~~~~-~--------~~~~-~~~~~~~~~v----~~G~~~rlRliN~~--~ 252 (613)
.. ...... ..+......|.|||..+... . .+.. .......+.+ +.|+++.|.|-|.+ .
T Consensus 381 ~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp CCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 00 000000 00001223467888765211 0 0110 0011223444 35999999999987 4
Q ss_pred CCCcEEEEEeceeeEEEEeCCc------------ccceeeeeEEEEccceeeeecccEEEEccCCcc
Q psy4302 253 LACPMLFFVEKHRMNLITVDGT------------PVQPQMFDSITIFPGQYTPVNSAIVLNINLDAA 307 (613)
Q Consensus 253 ~~~~~~~~i~gh~~~via~DG~------------~v~P~~~d~l~l~pgeR~~~~~dv~v~a~~~~~ 307 (613)
. .+-||||||.|.||+.+.+ +..|..+|++.+.||+.+ .|.+++++||.
T Consensus 461 ~--~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~----~irf~adNPG~ 521 (580)
T 3sqr_A 461 I--WHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYL----AIAFKLDNPGS 521 (580)
T ss_dssp C--CEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEE----EEEEESCSCEE
T ss_pred c--ceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceE----EEEEEcCCCee
Confidence 4 4556699999999998432 234889999999999999 99999999986
No 72
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.04 E-value=7.5e-10 Score=95.54 Aligned_cols=80 Identities=23% Similarity=0.299 Sum_probs=64.7
Q ss_pred ECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeec
Q psy4302 67 INRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSH 146 (613)
Q Consensus 67 iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H 146 (613)
-+.+|..+.|+|++||+|++ .|... .++++|+++. +||.....+..|.||++++|.| +++|+|||||+
T Consensus 26 ~~~~F~P~~i~v~~Gd~V~~--~N~d~-~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~ 93 (105)
T 2ov0_A 26 AKMKYETPELHVKVGDTVTW--INREA-MPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCT 93 (105)
T ss_dssp ETTEESSSEEEECTTCEEEE--EECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECS
T ss_pred eecEEcCCEEEECCCCEEEE--EECCC-CCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeC
Confidence 46677789999999999764 68875 6899999862 3676656666799999999888 69999999998
Q ss_pred CcccccCCceeeEEEe
Q psy4302 147 IGFQKMDGLEGPLVIR 162 (613)
Q Consensus 147 ~~~q~~~Gl~G~liV~ 162 (613)
.-. ||.|.|+|+
T Consensus 94 ~H~----gM~G~i~V~ 105 (105)
T 2ov0_A 94 PHP----FMRGKVVVE 105 (105)
T ss_dssp SCT----TCEEEEEEC
T ss_pred CCC----CCEEEEEEC
Confidence 622 999999984
No 73
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.99 E-value=5.4e-10 Score=101.57 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=71.2
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCC-CCCeeeecCcEEEEEeccCCCcccccccccchHHhhhcc-CCCCCCCCCCCCCc
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTF-LHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLARE-GPDLATKIRPQPCV 528 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~-~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~p~~ 528 (613)
..++++.|++|+|+|.|. + .. .|.||+|+....+.. +. ..+.+... .++..+ .-....+
T Consensus 35 ~~i~v~~G~~V~~~~~N~-~---~~~~H~~~i~~~~~~~~~-~~-------------~~~~~~~g~~~~~~p-~~~~~~~ 95 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNN-S---AVQQHNWILVKGGEAEAA-NI-------------ANAGLSAGPAANYLP-ADKSNII 95 (139)
T ss_dssp SEEEECTTCEEEEEEECC-C---SSCCBCCEEESSCHHHHH-HH-------------HHHHHHHCGGGTTCC-SCCTTEE
T ss_pred CeEEECCCCEEEEEEEeC-C---CCCCeeEEEeccccccch-hh-------------hhhhhcccccccccC-ccccccc
Confidence 358899999999999998 4 35 799999986531100 00 00000000 000000 0012357
Q ss_pred cceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
+||..|.++....|.|.+++||.|.||||+..|.+ ||...|.|
T Consensus 96 ~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 96 AESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred ccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 89999999999999999999999999999999999 99999987
No 74
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.93 E-value=2.3e-09 Score=92.19 Aligned_cols=86 Identities=12% Similarity=0.092 Sum_probs=65.7
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...++++.|++|+| .|. + ...|+||+||..|... .+ . +. .....
T Consensus 18 p~~i~v~~Gd~V~~--~N~-~---~~~H~v~~~~~~~~~~--~g----~----------~~--------------~~~~~ 61 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNN-K---LPPHNILFDDKQVPGA--SK----E----------LA--------------DKLSH 61 (105)
T ss_dssp SSEEEECTTEEEEE--EEC-S---SCCEEEEECTTSSGGG--CH----H----------HH--------------HHHCE
T ss_pred CCEEEEcCCCEEEE--EEC-C---CCCCeEEEeCCCCCcc--cc----c----------cc--------------ccccc
Confidence 35689999999976 477 3 4589999999765320 00 0 00 01136
Q ss_pred ceEEcCCCcEEEEEEEe-cCcceeEEeechhhhhhcCceEEEEec
Q psy4302 530 DTVTIPPNGYTVVRVHF-NNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~a-dNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
++..|++|+...++|.+ +.||.|.|||| .|...||...|.|.
T Consensus 62 ~~~~i~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 62 SQLMFSPGESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEECSTTCEEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cccccCCCCeEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 78899999999999998 79999999999 79999999999985
No 75
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.88 E-value=7.8e-09 Score=106.86 Aligned_cols=102 Identities=20% Similarity=0.306 Sum_probs=81.1
Q ss_pred EEECCCC--CCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc-------cccccCCCCCeEEEEEee
Q psy4302 65 LTINRRL--PSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL-------LTQCPIIPETTYRYKFPA 135 (613)
Q Consensus 65 ~~iNg~~--PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~-------vtq~pI~pG~~~~Y~f~~ 135 (613)
|++||+. ..|.|.++.||+|+++|.|... ..+.+|+||..... .+.||... .....|.||+++++.+.+
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v-~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a 240 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWAD-NRTGMLTGPDDPSQVIDNKICGPADSFGFQVIA 240 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEES-STTSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred hhcccCCcccccccccccCCEEEEEEecccc-cceeeeecCCeeEE-EEECCccCCCCCCeeeeEEEeCCCcceEEEEEe
Confidence 4688863 2678999999999999999885 78999999976542 23444322 112358999999999976
Q ss_pred c---CCCceEEeecCcccccCCceeeEEEeCCCCCC
Q psy4302 136 M---PYGTFFYHSHIGFQKMDGLEGPLVIRRPKKAD 168 (613)
Q Consensus 136 ~---~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~~ 168 (613)
. ++|+|.||||...+...||.|.|+|++++...
T Consensus 241 ~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~~ 276 (313)
T 3tas_A 241 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276 (313)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTCCC
T ss_pred ccCCCCEeEEEEeCChHHHHCCCeEEEEEECCCCCC
Confidence 4 58999999999999999999999999886543
No 76
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.87 E-value=6.4e-09 Score=106.81 Aligned_cols=101 Identities=19% Similarity=0.319 Sum_probs=78.6
Q ss_pred EEECCCCC--CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCC-------ccccccCCCCCeEEEEEee
Q psy4302 65 LTINRRLP--SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVP-------LLTQCPIIPETTYRYKFPA 135 (613)
Q Consensus 65 ~~iNg~~P--GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~-------~vtq~pI~pG~~~~Y~f~~ 135 (613)
|.+||+.- -|.|+++.||+|+++|+|... ..+.+|+||...... ..+|.. ...-..|.||+++++.+.+
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlHGh~F~v~-~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via 256 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGS-NFHTFHLHGHRWLDN-RTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIA 256 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESS-CCCEEEETTCCEESS-SSSSCCSTTCCCCEESEEECCTTCEEEEEEET
T ss_pred eeecCccccccccceecCCCEEEEEEEeccc-cceeeeEecceEEEE-ecccccCCcCCCCceeeEEeCCceeEEEEEEE
Confidence 57888743 578999999999999999987 689999999765321 122211 1112358999999998865
Q ss_pred ---cCCCceEEeecCcccccCCceeeEEEeCCCCC
Q psy4302 136 ---MPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKA 167 (613)
Q Consensus 136 ---~~~GT~wyH~H~~~q~~~Gl~G~liV~~~~~~ 167 (613)
+++|+|+||||...+...||.|.|.|++.+..
T Consensus 257 ~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~ 291 (299)
T 3t9w_A 257 GEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADGT 291 (299)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred eeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCCC
Confidence 46899999999999999999999999987543
No 77
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.87 E-value=3.4e-09 Score=91.35 Aligned_cols=82 Identities=17% Similarity=0.278 Sum_probs=62.1
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCC----ccccccCCCCCeEEEEEee-cCCCceEEeecC
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVP----LLTQCPIIPETTYRYKFPA-MPYGTFFYHSHI 147 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~----~vtq~pI~pG~~~~Y~f~~-~~~GT~wyH~H~ 147 (613)
-+.|+|++||+|++ .|... .++++|+|+...+. .+|.. ..+.-.+.||++++|.|++ +++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~-~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKV-PPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-
T ss_pred CCEEEECCCCEEEE--EECCC-CCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-
Confidence 37899999999765 58764 57888888754321 23320 0123358999999999988 78999999999
Q ss_pred cccccCCceeeEEEe
Q psy4302 148 GFQKMDGLEGPLVIR 162 (613)
Q Consensus 148 ~~q~~~Gl~G~liV~ 162 (613)
.|...||.|.|+|.
T Consensus 92 -~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 92 -PHRGAGMVGKITVA 105 (106)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -ChhhcCcEEEEEEc
Confidence 67788999999996
No 78
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.81 E-value=1.6e-07 Score=105.94 Aligned_cols=230 Identities=15% Similarity=0.120 Sum_probs=127.8
Q ss_pred eEEeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccC------CCCCCCCCc-----------ccccc
Q psy4302 60 VERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRH------TPHSDGVPL-----------LTQCP 122 (613)
Q Consensus 60 ~~~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~------~~~~DGv~~-----------vtq~p 122 (613)
.....+++||+. .|.+.+. |.++++||+|........+.+-|..... -...||... ++.-.
T Consensus 252 ~~gd~~~vNG~~-~p~~~v~-~~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~ 329 (612)
T 3gyr_A 252 FFGPYTTVNGRI-WPYADVD-DGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp CCCSEEEETTEE-SCEEEEE-SSEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEE
T ss_pred ccCceeeecCCc-cceEecc-CcEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEE
Confidence 445678999986 6999886 5589999999987666666664432100 024688421 22456
Q ss_pred CCCCCeEEEEEeecCC-CceEEeecCcccc-------cCCc--eee--EEEeCCCCCCCCCC---------CCCCCCC--
Q psy4302 123 IIPETTYRYKFPAMPY-GTFFYHSHIGFQK-------MDGL--EGP--LVIRRPKKADPNRD---------QYDTDYP-- 179 (613)
Q Consensus 123 I~pG~~~~Y~f~~~~~-GT~wyH~H~~~q~-------~~Gl--~G~--liV~~~~~~~p~~~---------~~d~d~~-- 179 (613)
|.||++++..+++.+. |.+|+-....... ..+. ... +.+......+.... ....+..
T Consensus 330 i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 409 (612)
T 3gyr_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHG 409 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCE
T ss_pred eccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccc
Confidence 9999999999999864 4444433221111 0111 111 12222211111000 0001110
Q ss_pred ceEEEEeeeccCCCCcc--cC------C----CC-------CCCCCCCCcceeecCcccccCCCCCCCCCccceEEEeCC
Q psy4302 180 SHTIIITDWLHGMTDAK--FP------G----NT-------YANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKG 240 (613)
Q Consensus 180 e~~l~l~d~~~~~~~~~--~~------~----~~-------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~v~~G 240 (613)
...+.+..-........ .. . .. ..........+.+||+.. .....+.++.|
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~----------~~~~~~~~~~g 479 (612)
T 3gyr_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF----------NDGLGFTIGEG 479 (612)
T ss_dssp EEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST----------TSCCCEEEETT
T ss_pred cccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccC----------CCCcceEeCCC
Confidence 11111111000000000 00 0 00 000112233456676654 12356889999
Q ss_pred cEEEEEEEecCCCCCcEEEEEeceeeEEEEeCCccc---------------------------ceeeeeEEEEccceeee
Q psy4302 241 LRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPV---------------------------QPQMFDSITIFPGQYTP 293 (613)
Q Consensus 241 ~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v---------------------------~P~~~d~l~l~pgeR~~ 293 (613)
++++|.|+|.+...|+ ||||||.|.||+.+|... ++..+|+|.|.+|+.+
T Consensus 480 ~~~~w~i~N~~~~~HP--~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v- 556 (612)
T 3gyr_A 480 THEQWTFLNLSPILHP--MHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGL- 556 (612)
T ss_dssp CEEEEEEEECSSSCEE--EEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEE-
T ss_pred CEEEEEEEcCCCCCcC--EeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEE-
Confidence 9999999999987655 459999999998766421 2335899999999999
Q ss_pred ecccEEEE-ccCCcc
Q psy4302 294 VNSAIVLN-INLDAA 307 (613)
Q Consensus 294 ~~~dv~v~-a~~~~~ 307 (613)
.|.++ ++++|.
T Consensus 557 ---~i~~rfadnpG~ 568 (612)
T 3gyr_A 557 ---RVMGKFDGAYGR 568 (612)
T ss_dssp ---EEEEECCSCCEE
T ss_pred ---EEEEEeCCCCcc
Confidence 99998 566665
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.77 E-value=3.3e-08 Score=89.68 Aligned_cols=91 Identities=15% Similarity=0.097 Sum_probs=66.4
Q ss_pred CCCCCeEEEecCCEEEEEEEECCCCC-ceeEEeCCCccc------------C--CCCC-CCCCc--cccccCCCCCeEEE
Q psy4302 70 RLPSPSIQVCRGDTIVVDVKNKIVDR-VVTIHWHGVYQR------------H--TPHS-DGVPL--LTQCPIIPETTYRY 131 (613)
Q Consensus 70 ~~PGP~i~v~~Gd~v~v~v~N~l~~~-~~tiHwHGl~~~------------~--~~~~-DGv~~--vtq~pI~pG~~~~Y 131 (613)
+|--+.|+|++||+|+++++|.-. . +++++.|+.... + ..+. ++.+. ...-.|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~-~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSA-VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCS-SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCC-CCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 454568999999999999999864 5 688888764210 0 0000 01010 01124899999999
Q ss_pred EEeecCCCceEEeecCcccccCCceeeEEEe
Q psy4302 132 KFPAMPYGTFFYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 132 ~f~~~~~GT~wyH~H~~~q~~~Gl~G~liV~ 162 (613)
.|+++++|+|+||||...+.. ||.|.|+|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999988888 999999984
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.65 E-value=6.1e-08 Score=82.62 Aligned_cols=85 Identities=12% Similarity=0.131 Sum_probs=66.3
Q ss_pred EeEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCce
Q psy4302 62 RPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTF 141 (613)
Q Consensus 62 ~~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~ 141 (613)
..+-.-|..|--..|+++.||+|++.+.|.-. ..+++...++... -.+.||++.+|.|+++++|+|
T Consensus 16 v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~d~-~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 16 IEVELNDDYFNPNVITIPINESTTLLLKNKGK-SEHTFTIKKLGID-------------VVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEEEETTEEESSEEEECTTSCEEEEEEECSS-SCEEEEEGGGTEE-------------EEECTTCEEEEEECCCSCEEE
T ss_pred EEEEEECCEEeCCEEEECCCCEEEEEEEcCCC-ceEEEEEecCCcc-------------eeecCCcceeEEEecccCceE
Confidence 33444456665468999999999999999865 4666666554221 247899999999999999999
Q ss_pred EEeecCcccccCCceeeEEEe
Q psy4302 142 FYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 142 wyH~H~~~q~~~Gl~G~liV~ 162 (613)
.|+|. .+...||.|.|+|+
T Consensus 82 ~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEECc--cccCCCCEEEEEEC
Confidence 99996 57778999999995
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.59 E-value=1.2e-07 Score=81.46 Aligned_cols=86 Identities=12% Similarity=0.107 Sum_probs=63.2
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...++++.|++|+|+ |. + ...|+||+|+..+.. .. - .+.. ...+
T Consensus 19 P~~i~v~~Gd~V~~~--n~-~---~~~H~~~~~~~~~~~--------~~-------g-~~~~--------------~~~~ 62 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NN-K---VPPHNVVFDAALNPA--------KS-------A-DLAK--------------SLSH 62 (106)
T ss_dssp SSEEEECTTCEEEEE--EC-S---SSCCCBEECSSSSTT--------CC-------H-HHHH--------------HHCB
T ss_pred CCEEEECCCCEEEEE--EC-C---CCCceEEEeCCCCcc--------cc-------c-ccch--------------hccc
Confidence 346899999999886 66 3 358999999864310 00 0 0000 0124
Q ss_pred ceEEcCCCcEEEEEEEe-cCcceeEEeechhhhhhcCceEEEEec
Q psy4302 530 DTVTIPPNGYTVVRVHF-NNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~a-dNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
|++.+.+|....+.|.+ +.||.|.|||| .|.+.||.+.+.|.
T Consensus 63 ~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 63 KQLLMSPGQSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CSCCCSTTCEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cceeeCCCCEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 67788889888888888 89999999999 89999999999985
No 82
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.56 E-value=8.1e-08 Score=81.33 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=58.5
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCC----ccccccCCCCCeEEEEEeecCCCceEEeecCcc
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVP----LLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGF 149 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~----~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~ 149 (613)
+.|+|++||+|+ +.|... .++++|+|+...+ +|.. ..+.-.+.||+++++.|. ++|+|+|||+ .
T Consensus 18 ~~i~v~~G~~V~--~~n~~~-~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~--~~G~y~y~C~--~ 85 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAG-FPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT--AAGEYGYYCE--P 85 (98)
T ss_dssp SEEEECTTCEEE--EEECSS-CCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC--SCEEEEEECG--G
T ss_pred CEEEECCCCEEE--EEECCC-CceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC--CCeEEEEEcC--C
Confidence 689999999876 578864 6899999985432 2211 011235899999998775 8999999999 6
Q ss_pred cccCCceeeEEEe
Q psy4302 150 QKMDGLEGPLVIR 162 (613)
Q Consensus 150 q~~~Gl~G~liV~ 162 (613)
+...||.|.|+|.
T Consensus 86 H~~~gM~G~i~V~ 98 (98)
T 2plt_A 86 HQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGTCEEEEEEC
T ss_pred ccccCCeEEEEEC
Confidence 7777999999984
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.53 E-value=6.3e-07 Score=81.21 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=66.0
Q ss_pred CCCCCeEEEecCCEEEEEEEE--CCCCCceeEEeCCCc------------cc-CCCCC---CCCCc-cccccCCCCCeEE
Q psy4302 70 RLPSPSIQVCRGDTIVVDVKN--KIVDRVVTIHWHGVY------------QR-HTPHS---DGVPL-LTQCPIIPETTYR 130 (613)
Q Consensus 70 ~~PGP~i~v~~Gd~v~v~v~N--~l~~~~~tiHwHGl~------------~~-~~~~~---DGv~~-vtq~pI~pG~~~~ 130 (613)
+|--+.|+|+.||+|+++++| ... ..++++.++.. .. ...+. |.... ..--.|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLG-VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSC-CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCC-CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 455579999999999999999 544 57777776310 00 00000 10000 0012589999999
Q ss_pred EEEeecCCCceEEeecCcccccCCceeeEEEe
Q psy4302 131 YKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 131 Y~f~~~~~GT~wyH~H~~~q~~~Gl~G~liV~ 162 (613)
+.|+++.+|+|||||+...+...||.|.|+|.
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 99999999999999999888888999999996
No 84
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.51 E-value=2.4e-07 Score=78.39 Aligned_cols=81 Identities=12% Similarity=0.196 Sum_probs=57.5
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCccccc
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKM 152 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~ 152 (613)
-+.|+|++||+|++ .|.-. .++++|.++...++. ..++.. .+...+.||+++++.| +++|+|+|||+ .+..
T Consensus 18 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~ 88 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKL-SPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCE--PHRG 88 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEE--EECCC-CCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc--CCCeEEEEEcC--Cccc
Confidence 36899999998765 47654 578888887432100 000000 1123589999999887 68999999999 6777
Q ss_pred CCceeeEEEe
Q psy4302 153 DGLEGPLVIR 162 (613)
Q Consensus 153 ~Gl~G~liV~ 162 (613)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 1pcs_A 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 8999999984
No 85
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.49 E-value=2.8e-07 Score=76.73 Aligned_cols=74 Identities=22% Similarity=0.320 Sum_probs=55.9
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCccccc
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKM 152 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~ 152 (613)
-+.|+++.||+|++ .|... .+++++.++.. ++. .....+.||+++++.| +++|+|||||+ .+..
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~-~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~~ 81 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKL-APHNVVVEGQP----ELS-----HKDLAFSPGETFEATF--SEPGTYTYYCE--PHRG 81 (91)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEE--EECCC-CCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe--CCCEEEEEEeC--CCcc
Confidence 46899999999865 57654 57888888721 010 1223589999988877 78999999999 5666
Q ss_pred CCceeeEEEe
Q psy4302 153 DGLEGPLVIR 162 (613)
Q Consensus 153 ~Gl~G~liV~ 162 (613)
.||.|.|+|+
T Consensus 82 ~gM~g~i~V~ 91 (91)
T 1bxv_A 82 AGMVGKIVVQ 91 (91)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 7999999984
No 86
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.45 E-value=4.5e-07 Score=82.17 Aligned_cols=104 Identities=15% Similarity=0.172 Sum_probs=70.5
Q ss_pred EEEecCCCEEEEEEEeCCCCCCCCCCCeeeecC--cEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 452 IIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGT--DIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 452 ~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~--~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
.++++.|++|+|++.|. +. ....|.||++.. +|.-+... ...+..+. +..+..-....++
T Consensus 34 ~i~v~~G~tV~~~~~N~-~~-~~~~H~~~~~~~~~~~~~~~~~---------------~~~~~~~~-~~~~~~~~~~~~~ 95 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQ-NN-LGVQHNWVLVNGGDDVAAAVNT---------------AAQNNADA-LFVPPPDTPNALA 95 (140)
T ss_dssp EEEEETTCEEEEEEEEC-CS-SCCCBCCEEESSSHHHHHHHHH---------------HHHTCGGG-TTCCCTTCTTEEE
T ss_pred eEEECCCCEEEEEEECC-CC-CCCceeEEEeccCcchhhhhhh---------------hhhhcccc-cccCccccccccc
Confidence 58999999999999993 11 346899999853 11100000 00000000 0000000123578
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
+|..|.+|....+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 96 ~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 96 WTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp ECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 99999999999999999999999999999999999999999885
No 87
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.42 E-value=6.5e-07 Score=79.16 Aligned_cols=75 Identities=13% Similarity=0.078 Sum_probs=53.6
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCcccccC
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMD 153 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~~ 153 (613)
..|+|++||+|+..+.|. ++++..+.. .+-+|.. ..-+.||++++|.| +.+|+|||+|- .+...
T Consensus 21 ~~i~V~~GdtV~f~~~~~----~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF--~~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK----SHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV--TEPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SEEEECTTEEEEEEESST----TCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEECG--GGTTT
T ss_pred CEEEECCCCEEEEEECCC----CceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCcC
Confidence 689999999988776662 333333321 1223431 12367999888888 68999999998 77888
Q ss_pred CceeeEEEeCC
Q psy4302 154 GLEGPLVIRRP 164 (613)
Q Consensus 154 Gl~G~liV~~~ 164 (613)
||.|.|+|.++
T Consensus 85 GM~G~I~V~~~ 95 (123)
T 3erx_A 85 GMVGLVQVGDA 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 99999999863
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.39 E-value=4.7e-07 Score=76.42 Aligned_cols=77 Identities=18% Similarity=0.309 Sum_probs=55.6
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc--cccccCCCCCeEEEEEeecCCCceEEeecCcccc
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL--LTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQK 151 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~--vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~ 151 (613)
+.|+|++||+|+ +.|.-. .+++++.++... .+|... ...-.+.||+++++.| +++|+|+|||+ .+.
T Consensus 19 ~~i~v~~G~~V~--~~n~~~-~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTVE--FVMNKV-GPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEEE--EEECSS-CCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECS--STT
T ss_pred CEEEECCCCEEE--EEECCC-CCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe--CCCeEEEEEcc--Chh
Confidence 689999999864 568653 567777766432 122111 1123589999998877 79999999999 677
Q ss_pred cCCceeeEEEe
Q psy4302 152 MDGLEGPLVIR 162 (613)
Q Consensus 152 ~~Gl~G~liV~ 162 (613)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 77999999984
No 89
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.36 E-value=7.8e-07 Score=75.81 Aligned_cols=80 Identities=15% Similarity=0.143 Sum_probs=55.5
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCC-----CCCCCcc--ccccCCCCCeEEEEEeecCCCceEEee
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPH-----SDGVPLL--TQCPIIPETTYRYKFPAMPYGTFFYHS 145 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~-----~DGv~~v--tq~pI~pG~~~~Y~f~~~~~GT~wyH~ 145 (613)
-+.|+|++||+|+ +.|.-. .+++++++.- .... ++..+.+ +.-.+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~-~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGE-TGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV--STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSS-SCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCC-CCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe--CCCeEEEEEe
Confidence 3689999999986 558754 5777777631 0000 0000111 223589999988877 7899999999
Q ss_pred cCcccccCCceeeEEEe
Q psy4302 146 HIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 146 H~~~q~~~Gl~G~liV~ 162 (613)
+ .+...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77778999999984
No 90
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.36 E-value=6.2e-07 Score=79.68 Aligned_cols=77 Identities=17% Similarity=0.188 Sum_probs=53.4
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCccccc
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKM 152 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~ 152 (613)
-+.|+|++||+|+..+.|. ++++..+.- .+-+|.. ..-+.||++++|.| +.+|+|||||. .|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~H~v~~~~~-----~~P~g~~---~f~s~pGet~s~TF--~~pG~y~y~C~--~H~~ 85 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----GHNSALMKG-----GAPEGAE---TWKGKINEEITVTL--SKPGVYMYQCA--PHVG 85 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----SCCCEECTT-----CSCTTCC---CCBCCTTCCCEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEEECCC----CceEEEccC-----cCCCCcc---ceecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 3689999999977655442 333333321 1123321 12457999988888 68999999998 5677
Q ss_pred CCceeeEEEeCCC
Q psy4302 153 DGLEGPLVIRRPK 165 (613)
Q Consensus 153 ~Gl~G~liV~~~~ 165 (613)
.||.|.|+|.++.
T Consensus 86 ~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 86 MGMIGAIVVGEPA 98 (127)
T ss_dssp GTCEEEEEESSCT
T ss_pred CCcEEEEEECcCC
Confidence 8999999998763
No 91
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.32 E-value=1.9e-06 Score=72.99 Aligned_cols=77 Identities=16% Similarity=0.213 Sum_probs=56.7
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc------cccccCCCCCeEEEEEeecCCCceEEeecC
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL------LTQCPIIPETTYRYKFPAMPYGTFFYHSHI 147 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~------vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~ 147 (613)
+.|+|++||+|+ ++|... .++++|.++... .+|... ...-.+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~-~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKIT--FKNNAG-FPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEEE--EEECSS-CCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCC-CcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC--CCcEEEEEcC-
Confidence 589999999865 578764 578888886422 122210 11125789999988775 8999999999
Q ss_pred cccccCCceeeEEEe
Q psy4302 148 GFQKMDGLEGPLVIR 162 (613)
Q Consensus 148 ~~q~~~Gl~G~liV~ 162 (613)
.+...||.|.|+|.
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 67778999999984
No 92
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.31 E-value=7e-07 Score=75.51 Aligned_cols=81 Identities=12% Similarity=0.202 Sum_probs=59.8
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...++++.|++|.|+ |. + ...|.||+|+..+ + .. . .. ...+
T Consensus 18 P~~i~v~~G~~V~~~--n~-~---~~~H~~~~~~~~~--------p-g~-------~---~~--------------~~~~ 58 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NN-K---LSPHNIVFDADGV--------P-AD-------T---AA--------------KLSH 58 (98)
T ss_dssp SSEEEECTTCEEEEE--EC-S---SCCEEEEECCSSS--------C-HH-------H---HH--------------HHCE
T ss_pred CCEEEECCCCEEEEE--EC-C---CCCcEEEEeCCCC--------C-cc-------c---cc--------------cccc
Confidence 346899999999887 66 3 3589999987431 1 00 0 00 0126
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
|++.+.+|....+.| +.||.|.|||| .|.+.||...+.|.
T Consensus 59 ~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 59 KGLLFAAGESFTSTF--TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECSTTCEEEEEC--CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred cccccCCCCEEEEEc--CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 788898898777766 89999999999 79999999999873
No 93
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.30 E-value=2.1e-06 Score=72.65 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=55.9
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc------cccccCCCCCeEEEEEeecCCCceEEeecC
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL------LTQCPIIPETTYRYKFPAMPYGTFFYHSHI 147 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~------vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~ 147 (613)
+.|+|++||+|+ +.|.-. .+++++.++... -+|... ...-.+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~-~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~--~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAG-FPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS--NKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSS-CCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC--SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCC-CceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC--CCceEEEEcC-
Confidence 689999999875 478754 577777775322 122110 01125799999888774 9999999999
Q ss_pred cccccCCceeeEEEe
Q psy4302 148 GFQKMDGLEGPLVIR 162 (613)
Q Consensus 148 ~~q~~~Gl~G~liV~ 162 (613)
.+...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 67778999999984
No 94
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.30 E-value=2e-06 Score=75.96 Aligned_cols=75 Identities=12% Similarity=0.037 Sum_probs=54.2
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCcccccC
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMD 153 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~~ 153 (613)
..|+|++||+|+ ++|.- .++++..+... +-+|.. ..-+.||++++|.| +.+|+|||||- .+...
T Consensus 22 ~~i~V~~GDTV~--f~n~~--~~Hnv~~~~~~-----~p~g~~---~~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD--KSHNAESVREV-----WPEGVA---PVKGGFSKEVVFNA--EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SEEEECTTCEEE--EECSS--SSCCCEECTTT-----SCTTSC---CCBCCTTCCEEEEC--CSSEEEEEECT--TTGGG
T ss_pred CEEEECCCCEEE--EEECC--CCccEEEeCCc-----CCCCcc---ccccCCCCEEEEEe--CCCeEEEEEcC--CCCcC
Confidence 689999999976 55553 35566555221 123322 22467999988887 68999999995 77888
Q ss_pred CceeeEEEeCC
Q psy4302 154 GLEGPLVIRRP 164 (613)
Q Consensus 154 Gl~G~liV~~~ 164 (613)
||.|.|+|.+|
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999875
No 95
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.29 E-value=1.3e-06 Score=73.79 Aligned_cols=81 Identities=16% Similarity=0.267 Sum_probs=60.2
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...++++.|++|+| .|. + ...|.||+|+..+ +... . ....++
T Consensus 17 P~~i~v~~G~~V~~--~n~-~---~~~H~~~~~~~~~--------p~~~-------~-----------------~~~~~~ 58 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNN-A---GFPHNIVFDEDAI--------PSGV-------N-----------------ADAISR 58 (98)
T ss_dssp SSEEEECTTCEEEE--EEC-S---SCCEEEEECGGGS--------CTTC-------C-----------------HHHHCE
T ss_pred CCEEEECCCCEEEE--EEC-C---CCceEEEEeCCCC--------CCcc-------c-----------------cccccc
Confidence 35689999999987 577 3 3589999997421 1100 0 001247
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
|++.+.+|....++| +.||.|.|||| .|.+.||...+.|
T Consensus 59 ~~~~~~pG~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 59 DDYLNAPGETYSVKL--TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEECSTTCEEEEEC--CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred cceecCCCCEEEEEe--CCCeEEEEEcC--CccccCCeEEEEE
Confidence 888999998777765 69999999999 7999999999987
No 96
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.27 E-value=2.8e-06 Score=70.60 Aligned_cols=73 Identities=15% Similarity=0.243 Sum_probs=56.6
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...+.++.|++|+|+ |. + ...|.+|+|+. . +...
T Consensus 18 P~~i~v~~Gd~V~~~--n~-~---~~~H~v~~~~~--------~--------------------------------~~~~ 51 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NN-K---LAPHNVVVEGQ--------P--------------------------------ELSH 51 (91)
T ss_dssp SSEEEECTTCEEEEE--EC-S---SCCEEEEETTC--------G--------------------------------GGCE
T ss_pred CCEEEECCCCEEEEE--EC-C---CCCcEEEEeCC--------C--------------------------------ccCc
Confidence 346899999999876 55 2 35899998872 0 0124
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
++..+++|+...+.| +.||.|.|||| .|...||.+.+.|
T Consensus 52 ~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 52 KDLAFSPGETFEATF--SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEECSTTCEEEEEC--CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccceeCCCCEEEEEe--CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 667788888777666 89999999999 8999999999987
No 97
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.20 E-value=2.1e-06 Score=72.44 Aligned_cols=79 Identities=15% Similarity=0.253 Sum_probs=58.2
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...++++.|++|+|+ |. + ...|.|++++..+ +. . .. ...+
T Consensus 18 P~~i~v~~G~~V~~~--n~-~---~~~H~~~~~~~~~--------~~-~--------~~-----------------~~~~ 57 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MN-K---VGPHNVIFDKVPA--------GE-S--------AP-----------------ALSN 57 (97)
T ss_dssp SSEEEECTTCEEEEE--EC-S---SCCCCBEEEECCT--------TS-C--------HH-----------------HHCB
T ss_pred CCEEEECCCCEEEEE--EC-C---CCCeEEEEeCCCC--------cc-c--------cc-----------------cccc
Confidence 346899999998876 66 3 3589999987553 10 0 00 0124
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
++..+.+|+...+.| +.||.|.|||+ .|.+.||.+.+.|
T Consensus 58 ~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 58 TKLAIAPGSFYSVTL--GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CCCCCSCSCCEEEEC--CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred cceecCCCCEEEEEe--CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 666777787767766 89999999999 8999999999987
No 98
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.09 E-value=6.3e-06 Score=69.68 Aligned_cols=84 Identities=13% Similarity=0.202 Sum_probs=59.3
Q ss_pred eeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCc
Q psy4302 449 CVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCV 528 (613)
Q Consensus 449 ~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~ 528 (613)
....++++.|++|+| .|. + ...|.||+++..| +... ... .. ...
T Consensus 15 ~P~~i~v~~G~tV~~--~n~-~---~~~H~~~~~~~~~--------p~g~-------~~~---~~------------~~~ 58 (99)
T 1byp_A 15 VPSDLSIASGEKITF--KNN-A---GFPHNDLFDKKEV--------PAGV-------DVT---KI------------SMP 58 (99)
T ss_dssp ESSEEEECTTEEEEE--EEC-S---SCCBCCEECTTSS--------CTTC-------CHH---HH------------SCC
T ss_pred eCCEEEECCCCEEEE--EEC-C---CCcceEEEeCCCC--------cccc-------ccc---cc------------ccc
Confidence 345689999999887 576 3 3589999998543 1000 000 00 112
Q ss_pred cceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
+|++.+.+|....+.| +.||.|.|||+ .|.+.||...+.|
T Consensus 59 ~~~~~~~~G~~~~~~f--~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 59 EEDLLNAPGEEYSVTL--TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEEEE--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccceeeCCCCEEEEEe--CCCcEEEEEcC--CccccCCEEEEEE
Confidence 5667788888777766 69999999999 7999999999987
No 99
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.08 E-value=8.9e-06 Score=71.86 Aligned_cols=76 Identities=11% Similarity=0.063 Sum_probs=51.2
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCccccc
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKM 152 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~ 152 (613)
-+.|+|++||+|+ +.|.-. ++++..+- ...-+|... .-..||++++|.| +.+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~~~~~--~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPVDK--GHNVESIK-----DMIPEGAEK---FKSKINENYVLTV--TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEE--EEESSS--SCCCEECT-----TCSCTTCCC---CBCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEECCC--CeEEEEec-----ccCCCCccc---eecCCCCEEEEEe--CCCEEEEEEeC--Cccc
Confidence 3689999999975 555532 33433321 111233211 1346899887777 68999999996 5777
Q ss_pred CCceeeEEEeCC
Q psy4302 153 DGLEGPLVIRRP 164 (613)
Q Consensus 153 ~Gl~G~liV~~~ 164 (613)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 899999999864
No 100
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.07 E-value=7.7e-06 Score=72.28 Aligned_cols=76 Identities=14% Similarity=0.095 Sum_probs=51.6
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCccccc
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKM 152 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~ 152 (613)
-+.|+|++||+|+ ++|.-. ++++..+. ..+-||... .-+.||++++|.| +.+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~n~~~--~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK--GHNVETIK-----GMAPDGADY---VKTTVGQEAVVKF--DKEGVYGFKCA--PHYM 83 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS--SCCCEECT-----TSSCTTCCC---CBCCTTSCEEEEC--CSCEEEEEECS--TTTT
T ss_pred CCEEEECCCCEEE--EEECCC--CcEEEEec-----ccCCCCccc---eecCCCCEEEEEe--CCCeEEEEEeC--Cccc
Confidence 3689999999965 556532 33333331 112233211 2357999888777 68999999996 4777
Q ss_pred CCceeeEEEeCC
Q psy4302 153 DGLEGPLVIRRP 164 (613)
Q Consensus 153 ~Gl~G~liV~~~ 164 (613)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1pmy_A 84 MGMVALVVVGDK 95 (123)
T ss_dssp TTCEEEEEESSC
T ss_pred cCCEEEEEEcCC
Confidence 899999999864
No 101
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.05 E-value=1.6e-05 Score=71.13 Aligned_cols=79 Identities=14% Similarity=0.234 Sum_probs=56.4
Q ss_pred CCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC
Q psy4302 68 NRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI 147 (613)
Q Consensus 68 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~ 147 (613)
+-.|=-+.|+|++||+|++ .|... .++++++... .+|......-.+.||++++|.| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~-~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEV-MPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCC-CceEEEEeCC-------CCCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 4455457999999999865 58765 5677766532 1222222333689999999888 589999999964
Q ss_pred cccccCCceeeEEEe
Q psy4302 148 GFQKMDGLEGPLVIR 162 (613)
Q Consensus 148 ~~q~~~Gl~G~liV~ 162 (613)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 33 999999984
No 102
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.01 E-value=1.7e-05 Score=66.93 Aligned_cols=78 Identities=15% Similarity=0.097 Sum_probs=55.0
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc----cccccCCCCCeEEEEEeecCCCceEEeecCc
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL----LTQCPIIPETTYRYKFPAMPYGTFFYHSHIG 148 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~----vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~ 148 (613)
-+.|+|++||+|++ .|... .++++....-. +-+|... .+...+.||+++++.| +++|+|+|+|-.
T Consensus 17 P~~i~v~~GdtV~~--~n~~~-~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAG-FPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEEE--EECCC-CCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc--CCCEEEEEEchh-
Confidence 36899999999665 57754 57777766421 1123210 0112589999988877 699999999974
Q ss_pred ccccCCceeeEEEe
Q psy4302 149 FQKMDGLEGPLVIR 162 (613)
Q Consensus 149 ~q~~~Gl~G~liV~ 162 (613)
+...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 6777999999984
No 103
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.00 E-value=1.7e-05 Score=68.66 Aligned_cols=74 Identities=8% Similarity=0.140 Sum_probs=56.2
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccc
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKD 530 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kD 530 (613)
..+.++.|+.|+|.+.|. + ...|-|++... .-
T Consensus 38 ~~i~v~~G~~V~~~~~n~-d---~~~H~~~i~~~--------------------------------------------~~ 69 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENK-S---PISEGFSIDAF--------------------------------------------GV 69 (112)
T ss_dssp CEEEEETTCEEEEEEEEC-S---SSCEEEEEGGG--------------------------------------------TE
T ss_pred CEEEEeCCCEEEEEEEEC-C---CCeEEEEEcCC--------------------------------------------Cc
Confidence 358999999999999998 3 22333332210 01
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
+..+++|....+.|.++.||.|.||||+..|... |.+.+.|.
T Consensus 70 ~~~i~pG~~~~~~f~~~~~G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 70 QEVIKAGETKTISFTADKAGAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEEECTTCEEEEEEECCSCEEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred eeEeCCCCEEEEEEECCCCEEEEEECCCCCchHH-CEEEEEEe
Confidence 4568889999999999999999999999877554 99988885
No 104
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.98 E-value=5.7e-05 Score=67.15 Aligned_cols=89 Identities=13% Similarity=0.026 Sum_probs=58.8
Q ss_pred CeEEEecC-CEEEEEEEECCCC------CceeEEeCCCcc-------cCCCCCC----CCCc-c-ccccCCCCCeEEEEE
Q psy4302 74 PSIQVCRG-DTIVVDVKNKIVD------RVVTIHWHGVYQ-------RHTPHSD----GVPL-L-TQCPIIPETTYRYKF 133 (613)
Q Consensus 74 P~i~v~~G-d~v~v~v~N~l~~------~~~tiHwHGl~~-------~~~~~~D----Gv~~-v-tq~pI~pG~~~~Y~f 133 (613)
..|.|++| |+|+|+|+|.-.- ....|--+|..+ ...+.++ +-+. + ..--|.||++.++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 47999999 9999999997531 122222233110 0000011 0010 0 112489999999999
Q ss_pred eec---CCCceEEeecCcccccCCceeeEEEeC
Q psy4302 134 PAM---PYGTFFYHSHIGFQKMDGLEGPLVIRR 163 (613)
Q Consensus 134 ~~~---~~GT~wyH~H~~~q~~~Gl~G~liV~~ 163 (613)
+++ ++|+|||.|-.-.|+. ||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 997 9999999998777777 8999999963
No 105
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.93 E-value=2.4e-05 Score=66.38 Aligned_cols=88 Identities=14% Similarity=0.161 Sum_probs=58.7
Q ss_pred eeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCc
Q psy4302 449 CVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCV 528 (613)
Q Consensus 449 ~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~ 528 (613)
....++++.|++|+|+ |. + ...|.|+++.-. . ... ..+. +.. .....
T Consensus 15 ~P~~i~v~~G~tV~~~--n~-~---~~~H~~~~~~~~-------~--~~~-------~~~~-~~~----------~~~~~ 61 (102)
T 1kdj_A 15 YPDSITVSAGEAVEFT--LV-G---ETGHNIVFDIPA-------G--APG-------TVAS-ELK----------AASMD 61 (102)
T ss_dssp ESSEEEECTTCCEEEE--EC-S---SSCBCCEECCCT-------T--CCH-------HHHH-HHH----------HTSCC
T ss_pred eCCEEEECCCCEEEEE--EC-C---CCCeEEEEeCcc-------c--ccc-------cccc-hhh----------ccccc
Confidence 3457899999999876 66 3 358999987311 1 000 0000 000 00122
Q ss_pred cceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
.+++.+.+|....+.| +.||.|.|||+ .|.+.||...+.|.
T Consensus 62 ~~~~~~~pG~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 62 ENDLLSEDEPSFKAKV--STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp TTCCBBTTBCEEEECC--CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred ccceecCCCCEEEEEe--CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 4667788888777766 89999999999 89999999999873
No 106
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.92 E-value=5.6e-05 Score=70.05 Aligned_cols=98 Identities=11% Similarity=0.069 Sum_probs=62.3
Q ss_pred EEEC-C-CCCCCeEEE-ecCCEEEEEEEECCCC------CceeEEeCCCcc---------cCCCC---CCCCCccccccC
Q psy4302 65 LTIN-R-RLPSPSIQV-CRGDTIVVDVKNKIVD------RVVTIHWHGVYQ---------RHTPH---SDGVPLLTQCPI 123 (613)
Q Consensus 65 ~~iN-g-~~PGP~i~v-~~Gd~v~v~v~N~l~~------~~~tiHwHGl~~---------~~~~~---~DGv~~vtq~pI 123 (613)
+..+ + +|=-..|.| +.||+|+|+|+|.-.. ....|--+|... ....+ .|..-....--|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 3444 4 443347999 9999999999998641 122222222100 00000 011000011248
Q ss_pred CCCCeEEEEEeec--CCCceEEeecCcccccCCceeeEEEeC
Q psy4302 124 IPETTYRYKFPAM--PYGTFFYHSHIGFQKMDGLEGPLVIRR 163 (613)
Q Consensus 124 ~pG~~~~Y~f~~~--~~GT~wyH~H~~~q~~~Gl~G~liV~~ 163 (613)
.||+++++.|+++ ++|+|||+|-.-.|.. ||.|.|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999988 8999999998777777 8999999963
No 107
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.87 E-value=5.1e-05 Score=64.24 Aligned_cols=73 Identities=18% Similarity=0.357 Sum_probs=56.2
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccc
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKD 530 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kD 530 (613)
..+.++.|+.|+|++.|. + ...|.|.+.+..+
T Consensus 28 ~~i~v~~G~tV~~~~~n~-d---~~~H~~~~~~~~~-------------------------------------------- 59 (100)
T 4hci_A 28 NVITIPINESTTLLLKNK-G---KSEHTFTIKKLGI-------------------------------------------- 59 (100)
T ss_dssp SEEEECTTSCEEEEEEEC-S---SSCEEEEEGGGTE--------------------------------------------
T ss_pred CEEEECCCCEEEEEEEcC-C---CceEEEEEecCCc--------------------------------------------
Confidence 358999999999999998 3 3456665533221
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEec
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
...+++|....+.|.++.||.|.|+|. .|...||...+.|.
T Consensus 60 ~~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 60 DVVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ceeecCCcceeEEEecccCceEEEECc--cccCCCCEEEEEEC
Confidence 123556777889999999999999997 69999999998873
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.77 E-value=0.00015 Score=64.35 Aligned_cols=88 Identities=13% Similarity=0.032 Sum_probs=57.2
Q ss_pred CeEEE-ecCCEEEEEEEECCCC------CceeEEeCCCcc-------c---CC---CCCCCCCccccccCCCCCeEEEEE
Q psy4302 74 PSIQV-CRGDTIVVDVKNKIVD------RVVTIHWHGVYQ-------R---HT---PHSDGVPLLTQCPIIPETTYRYKF 133 (613)
Q Consensus 74 P~i~v-~~Gd~v~v~v~N~l~~------~~~tiHwHGl~~-------~---~~---~~~DGv~~vtq~pI~pG~~~~Y~f 133 (613)
..|.| ++||+|+|+|+|.-.- ....|-=+|..+ . .. +..|..-....--|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 47999 9999999999998641 122222222110 0 00 001110000112479999999999
Q ss_pred eec--CCCc-eEEeecCcccccCCceeeEEEe
Q psy4302 134 PAM--PYGT-FFYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 134 ~~~--~~GT-~wyH~H~~~q~~~Gl~G~liV~ 162 (613)
+++ .+|+ |||.|-.-.|.. ||.|.|+|.
T Consensus 98 ~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 98 DVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 998 7766 999998777777 899999996
No 109
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.76 E-value=0.00013 Score=62.56 Aligned_cols=79 Identities=14% Similarity=0.238 Sum_probs=53.1
Q ss_pred CCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC
Q psy4302 68 NRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI 147 (613)
Q Consensus 68 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~ 147 (613)
+..|=-+.|+|+.||+|++ .|.-. ..+++...... .|......-.+.||+++++.| +.+|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~--~N~d~-~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYW--VNGEV-MPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSS-SCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEE--EECCC-CcEEEEEeCCC-------CCcccccccccCCCCEEEEEe--CCCEEEEEEeCC
Confidence 4445446899999999865 47754 45555544321 111111112478999998888 689999999965
Q ss_pred cccccCCceeeEEEe
Q psy4302 148 GFQKMDGLEGPLVIR 162 (613)
Q Consensus 148 ~~q~~~Gl~G~liV~ 162 (613)
|. ||.|.|+|+
T Consensus 96 --H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 --HP--FMRGKVIVE 106 (106)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --CC--CCEEEEEEC
Confidence 33 999999984
No 110
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.68 E-value=8.7e-05 Score=62.56 Aligned_cols=84 Identities=14% Similarity=0.164 Sum_probs=58.0
Q ss_pred eeEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCc
Q psy4302 449 CVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCV 528 (613)
Q Consensus 449 ~~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~ 528 (613)
....++++.|++|+| .|. + ...|.++++...+ +... .. . +. ...
T Consensus 15 ~P~~i~v~~G~tV~~--~n~-~---~~~H~v~~~~~~~--------p~~~-------~~--~-~~------------~~~ 58 (99)
T 1plc_A 15 VPSEFSISPGEKIVF--KNN-A---GFPHNIVFDEDSI--------PSGV-------DA--S-KI------------SMS 58 (99)
T ss_dssp ESSEEEECTTCEEEE--EEC-S---SCCBCCEECTTSS--------CTTC-------CH--H-HH------------CCC
T ss_pred eCCEEEECCCCEEEE--EEC-C---CCceEEEEeCCCC--------cccc-------cc--c-cc------------ccc
Confidence 345789999999987 576 3 3589999887432 1000 00 0 00 112
Q ss_pred cceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
++.+.+.+|....+.| +.||.|.|||+ .|.++||.+.+.|
T Consensus 59 ~~~~~~~~G~~~~~tf--~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 59 EEDLLNAKGETFEVAL--SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEEEC--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred cCccccCCCCEEEEEE--CCCceEEEEcC--CCcccCCEEEEEE
Confidence 4556777887766655 69999999999 7999999999987
No 111
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.68 E-value=0.00011 Score=79.74 Aligned_cols=96 Identities=20% Similarity=0.217 Sum_probs=66.5
Q ss_pred ecCCCeEEe--EEEECCCCCCCeEEEecCCEEEEEEEECCC--CCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEE
Q psy4302 55 VTADGVERP--ILTINRRLPSPSIQVCRGDTIVVDVKNKIV--DRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYR 130 (613)
Q Consensus 55 ~~~dG~~~~--~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~--~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~ 130 (613)
+..+|.+.. +...+-+|--+.|+|++||+|++.|.|... +..+++...++ |+- .-+.||++.+
T Consensus 537 v~RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GIK----~DaiPGrtns 603 (638)
T 3sbq_A 537 VIRDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GVS----MEISPQQTSS 603 (638)
T ss_dssp EEEETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TEE----EEECTTCEEE
T ss_pred cccCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cce----eeeCCCCeEE
Confidence 345565433 445566676679999999999999999632 22333332221 111 1488999999
Q ss_pred EEEeecCCCceEEeecC-cccccCCceeeEEEeC
Q psy4302 131 YKFPAMPYGTFFYHSHI-GFQKMDGLEGPLVIRR 163 (613)
Q Consensus 131 Y~f~~~~~GT~wyH~H~-~~q~~~Gl~G~liV~~ 163 (613)
+.|+++.+|+|||+|.. ....-.+|.|.|+|++
T Consensus 604 vtFtadkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 604 ITFVADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp EEEECCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred EEEEcCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 99999999999999984 1222247999999985
No 112
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.66 E-value=0.00013 Score=64.27 Aligned_cols=73 Identities=15% Similarity=0.165 Sum_probs=49.1
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecCcccccC
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMD 153 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~~~q~~~ 153 (613)
+.|+|++||+|+ +.|.-. .++++... ..+-+|.. ..-+.||++++|.| +++|+|||+|-. |..
T Consensus 21 ~~i~V~~GdtV~--f~n~d~--~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF--~~~G~y~y~C~~--H~~- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVT--FIPTDK--GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF--TAPGVYGVKCTP--HPF- 83 (122)
T ss_dssp SEEEECTTEEEE--EEESSS--SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE--CSCEEEEEEETT--EEE-
T ss_pred CEEEECCCCEEE--EEECCC--CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe--CCCEEEEEEeCC--Ccc-
Confidence 689999999866 456532 44444432 11122321 12357899988888 689999999975 333
Q ss_pred CceeeEEEeCC
Q psy4302 154 GLEGPLVIRRP 164 (613)
Q Consensus 154 Gl~G~liV~~~ 164 (613)
|.|.|+|.++
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999863
No 113
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.63 E-value=0.00027 Score=62.63 Aligned_cols=87 Identities=11% Similarity=0.035 Sum_probs=57.5
Q ss_pred CeEEE-ecCCEEEEEEEECCCCCc-----eeEEeC--CCcc-------c-C--C---CCCCCCCccccccCCCCCeEEEE
Q psy4302 74 PSIQV-CRGDTIVVDVKNKIVDRV-----VTIHWH--GVYQ-------R-H--T---PHSDGVPLLTQCPIIPETTYRYK 132 (613)
Q Consensus 74 P~i~v-~~Gd~v~v~v~N~l~~~~-----~tiHwH--Gl~~-------~-~--~---~~~DGv~~vtq~pI~pG~~~~Y~ 132 (613)
..|.| +.|++|+|+|+|.-. .+ +++-+- +..+ . + . +..|..-....--|.||+++++.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~-~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGK-LPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSC-SCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCC-CcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 47999 999999999999864 22 333221 1000 0 0 0 00111000011247999999999
Q ss_pred Eeec--CCCc-eEEeecCcccccCCceeeEEEe
Q psy4302 133 FPAM--PYGT-FFYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 133 f~~~--~~GT-~wyH~H~~~q~~~Gl~G~liV~ 162 (613)
|+++ ++|+ |+|.|-.-.|.. ||.|.|+|.
T Consensus 96 f~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 96 FDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 9998 8995 999998777777 999999996
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.61 E-value=0.00032 Score=62.21 Aligned_cols=87 Identities=9% Similarity=0.052 Sum_probs=57.4
Q ss_pred CeEEE-ecCCEEEEEEEECCCCCc-----eeEEe--CCCcc-------cCCCCCCCCC-----cc-ccccCCCCCeEEEE
Q psy4302 74 PSIQV-CRGDTIVVDVKNKIVDRV-----VTIHW--HGVYQ-------RHTPHSDGVP-----LL-TQCPIIPETTYRYK 132 (613)
Q Consensus 74 P~i~v-~~Gd~v~v~v~N~l~~~~-----~tiHw--HGl~~-------~~~~~~DGv~-----~v-tq~pI~pG~~~~Y~ 132 (613)
..|.| +.||+|+|+|+|.-. .+ +++-. .|..+ ...+.++=++ .+ ..-.|.||+++++.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~-~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGS-LPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSS-CCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCC-CcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 47999 899999999999864 21 33222 22110 0000011001 00 01148999999999
Q ss_pred Eeec--CCCc-eEEeecCcccccCCceeeEEEe
Q psy4302 133 FPAM--PYGT-FFYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 133 f~~~--~~GT-~wyH~H~~~q~~~Gl~G~liV~ 162 (613)
|+++ .+|+ |||.|-.-.|.. ||.|.|+|.
T Consensus 97 f~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 97 FDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 9998 7887 999998777777 899999984
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.59 E-value=0.00035 Score=64.05 Aligned_cols=88 Identities=18% Similarity=0.188 Sum_probs=60.1
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCc--
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCV-- 528 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~-- 528 (613)
..++++.|+.|.+++.|. +. ...|-|-++.. +. .+... ....+..
T Consensus 61 p~i~V~~GD~V~~~~tN~-~~--~~~H~~~i~~~-------~~--~~~~~---------------------~~~~~~~~~ 107 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINT-NK--GFGHSFDITKK-------GP--PYAVM---------------------PVIDPIVAG 107 (154)
T ss_dssp CEEEECTTCEEEEEEEEC-CT--TCCCCCEEESC-------CS--CCCSS---------------------CCCCSEEEE
T ss_pred CEEEEeCCCEEEEEEEcC-CC--CeeeEEEEeec-------Cc--chhcc---------------------ccccccccc
Confidence 368999999999999997 42 34666665532 11 00000 0000000
Q ss_pred -cceEEcCCCc--EEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 529 -KDTVTIPPNG--YTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 529 -kDTv~Vp~~g--~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
.-+..|.+|. ...++|.+ .||.+.||||+.-|...||-+.+.|
T Consensus 108 ~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 108 TGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp BCCCCCCBTTBEEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred cccccccCCCCceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 0112567788 88999999 9999999999999999999999887
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.44 E-value=0.00037 Score=77.07 Aligned_cols=78 Identities=18% Similarity=0.295 Sum_probs=61.2
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...++++.|+.|+|.+.|. ....+..|.|+++++.+.
T Consensus 512 pp~I~V~~Gd~V~~~ltN~-d~~~Dv~Hgf~ip~~gv~------------------------------------------ 548 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNL-DEIDDLTHGFTMGNYGVA------------------------------------------ 548 (595)
T ss_dssp CSEEEEETTCEEEEEEEEC-CCSTTCCEEEEETTTTEE------------------------------------------
T ss_pred CCEEEEECCCEEEEEEEeC-CCCCCceeeEEecCCCcc------------------------------------------
Confidence 3578899999999999997 432345788887764321
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeec---hhhhhhcCceEEEEecc
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCH---FIFHTETGMNTVFQVGD 574 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCH---i~~H~~~GM~~~~~V~~ 574 (613)
..+.||....++|.++.||.|.|||| ...|. ||...+.|..
T Consensus 549 --~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 549 --MEIGPQMTSSVTFVAANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp --EEECTTCEEEEEEECCSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred --eeeCCCCeEEEEEECCCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 34666888899999999999999999 45675 9999999864
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.12 E-value=0.0017 Score=55.26 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=49.1
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccc
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKD 530 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kD 530 (613)
..+.++.|+.|+|+ |. + ...|.+|+|+.. . +. . .+ +
T Consensus 33 ~~i~v~~Gd~V~~~--N~-d---~~~H~v~~~~~~------~--g~-~----------------------------~~-~ 68 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NR-E---AMPHNVHFVAGV------L--GE-A----------------------------AL-K 68 (105)
T ss_dssp SEEEECTTCEEEEE--EC-S---SSCBCCEECTTT------S--SS-S----------------------------CE-E
T ss_pred CEEEECCCCEEEEE--EC-C---CCCEEEEEcCCC------C--Cc-c----------------------------cc-c
Confidence 36899999999885 77 3 358999987521 0 10 0 00 1
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
+-.+++|....+.| +.||.+.|||++ |. ||.+.+.|
T Consensus 69 ~~~~~pG~~~~~tf--~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 69 GPMMKKEQAYSLTF--TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CCCBCTTEEEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccccCCCCEEEEEe--CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 11356676555555 899999999997 65 99998877
No 118
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.74 E-value=0.003 Score=55.50 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=30.3
Q ss_pred CCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccCC
Q psy4302 535 PPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRK 576 (613)
Q Consensus 535 p~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~~ 576 (613)
.+|....+.| +.||.|.|||- .|...||...+.|+++.
T Consensus 60 ~pg~t~s~TF--~~~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 60 GFSKEVVFNA--EKEGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp CTTCCEEEEC--CSSEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCCCEEEEEe--CCCeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 3455444444 89999999995 89999999999998653
No 119
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.69 E-value=0.0092 Score=52.21 Aligned_cols=86 Identities=10% Similarity=0.086 Sum_probs=53.1
Q ss_pred CCeEEEec-CCEEEEEEEECCCC------CceeEEeC---------CCcc-cCCCCC---CCCCccccccCCCCCeEEEE
Q psy4302 73 SPSIQVCR-GDTIVVDVKNKIVD------RVVTIHWH---------GVYQ-RHTPHS---DGVPLLTQCPIIPETTYRYK 132 (613)
Q Consensus 73 GP~i~v~~-Gd~v~v~v~N~l~~------~~~tiHwH---------Gl~~-~~~~~~---DGv~~vtq~pI~pG~~~~Y~ 132 (613)
-..|.|+. |++|+|+|+|.-.- ....|--- |+.. ....++ |..-...-.-|.||++++..
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 46899986 99999999998741 12222111 1110 000111 11000011237999999999
Q ss_pred Eeec---CCCceEEeecCcccccCCceeeEEEe
Q psy4302 133 FPAM---PYGTFFYHSHIGFQKMDGLEGPLVIR 162 (613)
Q Consensus 133 f~~~---~~GT~wyH~H~~~q~~~Gl~G~liV~ 162 (613)
|+++ ++|+|.|-|. .|. ||.|.++|.
T Consensus 97 f~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9998 8999999998 454 899999984
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.66 E-value=0.0042 Score=54.52 Aligned_cols=35 Identities=34% Similarity=0.558 Sum_probs=29.6
Q ss_pred CCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEecc
Q psy4302 536 PNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 536 ~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
++....+.| +.||.|.|+|- .|...||-..+.|++
T Consensus 60 pg~t~s~TF--~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 60 INESYTLTV--TEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp TTCCEEEEE--CSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCCEEEEEe--CCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 465555555 89999999999 899999999999986
No 121
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.66 E-value=0.0033 Score=55.54 Aligned_cols=36 Identities=28% Similarity=0.545 Sum_probs=29.1
Q ss_pred CCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEeccC
Q psy4302 536 PNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDR 575 (613)
Q Consensus 536 ~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~~ 575 (613)
++....+. ++.||.|.|||- .|...||...+.|+++
T Consensus 62 pGet~s~T--F~~pG~y~y~C~--~H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 62 INEEITVT--LSKPGVYMYQCA--PHVGMGMIGAIVVGEP 97 (127)
T ss_dssp TTCCCEEE--CCSCEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CCCEEEEE--eCCCeEEEEEeC--CCCcCCcEEEEEECcC
Confidence 45544444 489999999999 6999999999999864
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.55 E-value=0.0073 Score=50.47 Aligned_cols=40 Identities=23% Similarity=0.405 Sum_probs=32.6
Q ss_pred cceEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
.+...+.+|....+.| +.||.|.|+|-+ |..+||-+.+.|
T Consensus 58 ~~~~~~~~g~~~~~tf--~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 58 YDDYLNSKGETVVRKL--STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEEECSTTCEEEEEC--CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred ccccccCCCCEEEEEc--CCCEEEEEEchh--hccCCCEEEEEE
Confidence 3446777787666666 899999999985 999999999887
No 123
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.65 E-value=0.029 Score=49.11 Aligned_cols=35 Identities=31% Similarity=0.598 Sum_probs=28.3
Q ss_pred CCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEecc
Q psy4302 536 PNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 536 ~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
+|.... +.++.||.|.|+|- .|...||-+.+.|++
T Consensus 60 pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 60 INENYV--LTVTQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp TTCCEE--EECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCEEE--EEeCCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 455434 45589999999997 599999999999975
No 124
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.44 E-value=0.079 Score=47.09 Aligned_cols=72 Identities=17% Similarity=0.324 Sum_probs=52.4
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC--c-cc
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI--G-FQ 150 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~--~-~q 150 (613)
..|.+..|++|++.+.|.. .. |+..... .|. +.-+.||+.-++.|+++++|+|+|+|.- | .+
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SC-----EEEEETT----SSC----EEEECBTBCEEEEEECCSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC--cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc
Confidence 4799999999999999963 33 3333221 111 1236799999999999999999999963 2 23
Q ss_pred ccCCceeeEEEe
Q psy4302 151 KMDGLEGPLVIR 162 (613)
Q Consensus 151 ~~~Gl~G~liV~ 162 (613)
.+|.|.++|.
T Consensus 125 --~~M~g~v~V~ 134 (135)
T 2cua_A 125 --QNMFGTIVVK 134 (135)
T ss_dssp --TTCEEEEEEE
T ss_pred --CCCEEEEEEE
Confidence 3788998885
No 125
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=95.38 E-value=0.063 Score=45.48 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=26.9
Q ss_pred EcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 533 TIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 533 ~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
.+.+|....+.| +.||.+.|+|-+ |. ||.+.+.|
T Consensus 72 ~l~~g~~~~~tf--~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 72 MMTKDQAYAITF--NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CBCTTEEEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccCCCCEEEEEe--CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 455676656665 899999999987 76 99999887
No 126
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.13 E-value=0.074 Score=47.03 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=48.5
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccc
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKD 530 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kD 530 (613)
..++++.|++|+|+ |. + ...|.+++.... .+. ..-+
T Consensus 60 ~~i~V~~GdtV~~~--N~-d---~~~H~v~~~~~~--------~g~------------------------------~~~~ 95 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NG-E---VMPHNVAFKKGI--------VGE------------------------------DAFR 95 (132)
T ss_dssp SEEEECTTCEEEEE--EC-S---SSCBCCEECTTT--------SSS------------------------------SCEE
T ss_pred CEEEECCCCEEEEE--EC-C---CCceEEEEeCCC--------CCc------------------------------cccc
Confidence 46899999999886 76 3 347877764311 000 0012
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEe
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V 572 (613)
+-.+++|....+.| +.||.+.|||-+ |. ||...+.|
T Consensus 96 s~~l~pG~t~~~tF--~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 96 GEMMTKDQAYAITF--NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CCCBCTTEEEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccccCCCCEEEEEc--CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 22456676666666 899999999986 76 99999887
No 127
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.06 E-value=0.099 Score=48.19 Aligned_cols=85 Identities=14% Similarity=0.227 Sum_probs=57.9
Q ss_pred eEEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceE
Q psy4302 63 PILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFF 142 (613)
Q Consensus 63 ~~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~w 142 (613)
.+...+=++--..|.+..|++|++.+.|.. ..++...-++ |+ +--+.||+.-++.|+++++|+|+
T Consensus 82 ~m~a~~~~f~Pn~l~VP~G~~Vr~~vTS~D--ViHsf~IP~l---------gi----k~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 82 YVLAFAFGYQPNPIEVPQGAEIVFKITSPD--VIHGFHVEGT---------NI----NVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEEETTEEESSSEEEETTSEEEEEEECSS--SCEEEEETTS---------SC----EEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEEEeceEecCEEEEeCCCeEEEEEecCC--ceEEEEECCC---------Ce----EEEecCCceeEEEEEeCCCEEEE
Confidence 333333333335799999999999999973 3333333222 11 11367999999999999999999
Q ss_pred EeecC-cccccCCceeeEEEe
Q psy4302 143 YHSHI-GFQKMDGLEGPLVIR 162 (613)
Q Consensus 143 yH~H~-~~q~~~Gl~G~liV~ 162 (613)
+.|.- -...-.+|.|-++|+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99983 223334789999886
No 128
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=94.99 E-value=0.055 Score=47.30 Aligned_cols=36 Identities=31% Similarity=0.527 Sum_probs=28.7
Q ss_pred CCCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEecc
Q psy4302 535 PPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 535 p~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
.+|....+ .++.||.|.|+|- .|...||.+.+.|++
T Consensus 59 ~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 59 TVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred CCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 34554444 4589999999997 599999999999975
No 129
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=94.35 E-value=0.18 Score=46.39 Aligned_cols=45 Identities=20% Similarity=0.152 Sum_probs=39.2
Q ss_pred ccceEEcCCCcEEEEEEEec--CcceeEEeechhhhhhcCceEEEEec
Q psy4302 528 VKDTVTIPPNGYTVVRVHFN--NPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 528 ~kDTv~Vp~~g~~vIrf~ad--NPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
...|..|.+|....|.|.++ .||.|-|+|-+--|.. ||-..|.|.
T Consensus 120 l~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 120 VAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred hccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 44566788899999999988 8999999999988988 899999885
No 130
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=93.89 E-value=0.32 Score=42.78 Aligned_cols=44 Identities=16% Similarity=0.166 Sum_probs=38.4
Q ss_pred cceEEcCCCcEEEEEEEec---CcceeEEeechhhhhhcCceEEEEec
Q psy4302 529 KDTVTIPPNGYTVVRVHFN---NPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~ad---NPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
..|..|.+|....|.|.++ .||.+-|.|-+--|.. ||-..+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 82 AFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp EECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 3566788999999999997 8999999999888988 899999885
No 131
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=93.32 E-value=0.17 Score=43.98 Aligned_cols=33 Identities=36% Similarity=0.501 Sum_probs=25.9
Q ss_pred CCcEEEEEEEecCcceeEEeechhhhhhcCceEEEEecc
Q psy4302 536 PNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574 (613)
Q Consensus 536 ~~g~~vIrf~adNPG~Wl~HCHi~~H~~~GM~~~~~V~~ 574 (613)
+|....+.| +.||.|.|+|-+ |.. |.+.+.|.+
T Consensus 60 ~g~t~~~tF--~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 60 INENYKVTF--TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp TTCCEEEEE--CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCEEEEEe--CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 455545555 899999999976 776 999999975
No 132
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.13 E-value=0.32 Score=53.09 Aligned_cols=79 Identities=14% Similarity=0.233 Sum_probs=57.4
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
...+.++.|+.|+|++.|. ....+..|.|.+.++...
T Consensus 557 P~eI~VP~GdtVrfiLTN~-D~veDViHSF~IPslGIK------------------------------------------ 593 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNI-DQIEDVSHGFVVVNHGVS------------------------------------------ 593 (638)
T ss_dssp CCEEEEETTCEEEEEEEEC-CCSTTCCEEEEETTTTEE------------------------------------------
T ss_pred CCEEEEecCceeEEEEecC-CcCCCceeeeEecCCCce------------------------------------------
Confidence 3568899999999999996 322245666665443211
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhhh-cCceEEEEec
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTE-TGMNTVFQVG 573 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~-~GM~~~~~V~ 573 (613)
+.+.||....+.|.++.||.|.++|...-|.. .+|...+.|.
T Consensus 594 --~DaiPGrtnsvtFtadkPGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 594 --MEISPQQTSSITFVADKPGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp --EEECTTCEEEEEEECCSCEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred --eeeCCCCeEEEEEEcCCCEEEEEECCCcCCCCcccceEEEEEe
Confidence 13455778899999999999999999755542 5799988885
No 133
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=92.72 E-value=0.48 Score=41.93 Aligned_cols=38 Identities=26% Similarity=0.463 Sum_probs=30.7
Q ss_pred cCCCcEEEEEEEecCcceeEEeech---hhhhhcCceEEEEec
Q psy4302 534 IPPNGYTVVRVHFNNPGIWIMHCHF---IFHTETGMNTVFQVG 573 (613)
Q Consensus 534 Vp~~g~~vIrf~adNPG~Wl~HCHi---~~H~~~GM~~~~~V~ 573 (613)
+.+|....+.|.++.||.+.++|.. ..| .+|-..+.|.
T Consensus 94 ~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 94 VLPGEVSTVRYTFKRPGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp ECBTBCEEEEEECCSCEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred eCCCCcEEEEEEcCCCEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 4456667899999999999999977 667 4888888774
No 134
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.36 E-value=0.53 Score=40.98 Aligned_cols=103 Identities=13% Similarity=0.182 Sum_probs=62.0
Q ss_pred EEEEecC-CCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhcc-CCCCCCCCCCCCCc
Q psy4302 451 EIIKVGL-NQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLARE-GPDLATKIRPQPCV 528 (613)
Q Consensus 451 ~~~~v~~-g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~p~~ 528 (613)
..+.++. |+.|.++|.|. +.. |--.=||.|-+...+.. . . -..+.++.. ..+-++- -+....
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~-G~~-----p~~~M~Hn~Vl~~~~~~---~-~-----~~~~~m~~~~~~~y~~~-~d~~vi 81 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHP-GNL-----PKNVMGHNWVLSTAADM---Q-G-----VVTDGMASGLDKDYLKP-DDSRVI 81 (125)
T ss_dssp SEEEECTTCSEEEEEEECC-SSC-----CHHHHCBCCEEEEHHHH---H-H-----HHHHHHHHCGGGTTSCT-TCTTCC
T ss_pred CEEEEecCCCEEEEEEEEC-Ccc-----cccccCceEEEcccchH---H-H-----HHHHHHhcChhhccCCC-CCccce
Confidence 4588976 99999999999 532 11111456655533210 0 0 011222211 0010100 123356
Q ss_pred cceEEcCCCcEEEEEEEec---CcceeEEeechhhhhhcCceEEEEec
Q psy4302 529 KDTVTIPPNGYTVVRVHFN---NPGIWIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~ad---NPG~Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
-.|.+|.+|....|-|.+. .||.|-|-|- -|. ||-..+.|.
T Consensus 82 a~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 82 AHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred eccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 6777899999999999997 8999999999 888 999988873
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=91.30 E-value=1.5 Score=38.39 Aligned_cols=44 Identities=20% Similarity=0.269 Sum_probs=37.5
Q ss_pred cceEEcCCCcEEEEEEEec--Ccce-eEEeechhhhhhcCceEEEEec
Q psy4302 529 KDTVTIPPNGYTVVRVHFN--NPGI-WIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 529 kDTv~Vp~~g~~vIrf~ad--NPG~-Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
..|..|.+|....|-|.++ .||. +-|.|-+--|.. ||-..+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 82 AHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 3566788999999999998 7866 999999888888 899999885
No 136
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=90.79 E-value=1.4 Score=38.45 Aligned_cols=45 Identities=20% Similarity=0.295 Sum_probs=38.6
Q ss_pred ccceEEcCCCcEEEEEEEec--Ccce-eEEeechhhhhhcCceEEEEec
Q psy4302 528 VKDTVTIPPNGYTVVRVHFN--NPGI-WIMHCHFIFHTETGMNTVFQVG 573 (613)
Q Consensus 528 ~kDTv~Vp~~g~~vIrf~ad--NPG~-Wl~HCHi~~H~~~GM~~~~~V~ 573 (613)
...|..|.+|....|.|.+. .||. +-|.|-+--|.. ||-..+.|.
T Consensus 80 ~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 80 IAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred hccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 34566788999999999998 8995 999999988988 999999885
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=87.75 E-value=4.2 Score=35.43 Aligned_cols=44 Identities=18% Similarity=0.239 Sum_probs=37.3
Q ss_pred ccceEEcCCCcEEEEEEEec--Ccce-eEEeechhhhhhcCceEEEEe
Q psy4302 528 VKDTVTIPPNGYTVVRVHFN--NPGI-WIMHCHFIFHTETGMNTVFQV 572 (613)
Q Consensus 528 ~kDTv~Vp~~g~~vIrf~ad--NPG~-Wl~HCHi~~H~~~GM~~~~~V 572 (613)
...|-.|.+|....|.|.+. .||. +-|.|-+--|.. ||-..+.|
T Consensus 81 ~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 81 IAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred heeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 34455789999999999998 7886 999999988988 89998877
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=84.93 E-value=3.6 Score=37.64 Aligned_cols=39 Identities=23% Similarity=0.322 Sum_probs=30.1
Q ss_pred CCCcEEEEEEEecCcceeEEeechh-hhhhcCceEEEEec
Q psy4302 535 PPNGYTVVRVHFNNPGIWIMHCHFI-FHTETGMNTVFQVG 573 (613)
Q Consensus 535 p~~g~~vIrf~adNPG~Wl~HCHi~-~H~~~GM~~~~~V~ 573 (613)
-||....+.|.++.||.+.+.|... =+...+|-..+.|.
T Consensus 128 ~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 128 LPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp CTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred cCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 3466678999999999999999853 23446788888775
No 139
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=78.35 E-value=3.9 Score=34.95 Aligned_cols=48 Identities=10% Similarity=0.175 Sum_probs=35.1
Q ss_pred EEEEEEEecCCCCCcEEEEEece-eeEEEEeCCcccceeeeeEEEEccceeeeecccEEEEcc
Q psy4302 242 RHRFRIIGGSCLACPMLFFVEKH-RMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNIN 303 (613)
Q Consensus 242 ~~rlRliN~~~~~~~~~~~i~gh-~~~via~DG~~v~P~~~d~l~l~pgeR~~~~~dv~v~a~ 303 (613)
.|+|||+|.+...+.+.|++.|. .+++++ + ..+.|.|||.. ++-|...
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~----~~~v~v~ 82 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVL----NLPMSLG 82 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEE----EEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEE----EEEEEEE
Confidence 69999999999888888888774 344433 1 14999999988 5555443
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=54.57 E-value=12 Score=35.24 Aligned_cols=72 Identities=15% Similarity=0.106 Sum_probs=50.6
Q ss_pred eEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC--ccccc
Q psy4302 75 SIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI--GFQKM 152 (613)
Q Consensus 75 ~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~--~~q~~ 152 (613)
.|.+..|+.|++.|.+..- - ||...+.. ..+.-+-||..-...|.++.+|+|+..|.- |.. -
T Consensus 42 ~l~lP~g~~V~~~lTS~DV--i-----HSF~IP~l--------gvK~daiPGr~n~l~~~~~~pG~y~g~CsE~CG~~-H 105 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV--M-----HSFFIPRL--------GSQIYAMAGMQTRLHLIANEPGTYDGICAEICGPG-H 105 (205)
T ss_dssp EEEEETTSCEEEEEEESSS--C-----EEEEEGGG--------TEEEEECTTCCEEEEECCSSSEEEEEEECSCCSTT-S
T ss_pred eEEEeCCCEEEEEEecCCc--e-----eeEEeccc--------CcEEEecCCceEEEEEEeCCCeEEEEEcccccccc-h
Confidence 6999999999999999742 3 44333210 112246689999999999999999999973 322 2
Q ss_pred CCceeeEEEe
Q psy4302 153 DGLEGPLVIR 162 (613)
Q Consensus 153 ~Gl~G~liV~ 162 (613)
..|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 2466777776
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=50.45 E-value=38 Score=28.96 Aligned_cols=71 Identities=13% Similarity=0.067 Sum_probs=44.5
Q ss_pred EEEECCCCCCCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCc---cccccCCCCCeEEEEEeec---C
Q psy4302 64 ILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPL---LTQCPIIPETTYRYKFPAM---P 137 (613)
Q Consensus 64 ~~~iNg~~PGP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~---vtq~pI~pG~~~~Y~f~~~---~ 137 (613)
+...|-+-=.=+|+...|.+..+.|.+.-. ...| -|+||-.+ ..+-.|+||++.+|+...+ .
T Consensus 24 ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G----~~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~ 91 (120)
T 3isy_A 24 MSLKNQSERAIEFQFSTGQKFELVVYDSEH----KERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPE 91 (120)
T ss_dssp EEEEECSSSCEEEEESSSCCEEEEEECTTC----CEEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCC
T ss_pred EEEEcCCCCcEEEEeCCCCEEEEEEECCCC----CEEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCC
Confidence 333443322336777777777777776432 1222 25777543 2234699999999999887 4
Q ss_pred CCceEEeec
Q psy4302 138 YGTFFYHSH 146 (613)
Q Consensus 138 ~GT~wyH~H 146 (613)
+|+|..+.-
T Consensus 92 pG~Ytl~a~ 100 (120)
T 3isy_A 92 PGTYEVKVT 100 (120)
T ss_dssp SEEEEEEEE
T ss_pred CccEEEEEE
Confidence 899988764
No 142
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=40.27 E-value=48 Score=28.48 Aligned_cols=25 Identities=36% Similarity=0.525 Sum_probs=18.8
Q ss_pred CCCCCccccccCCCCCeEEEEEeec
Q psy4302 112 SDGVPLLTQCPIIPETTYRYKFPAM 136 (613)
Q Consensus 112 ~DGv~~vtq~pI~pG~~~~Y~f~~~ 136 (613)
.|+=...+.|||.+|+.++|.+.+.
T Consensus 71 ~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 71 SDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp CBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCcccCCCcCcccCCcEEEEEEEeE
Confidence 3544333589999999999998764
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=32.31 E-value=63 Score=32.19 Aligned_cols=77 Identities=12% Similarity=0.172 Sum_probs=50.9
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
.+.+.+|.|+.|++.+.+. +..|. |+|=+.+ ...
T Consensus 188 dN~lvlP~g~~V~~~ltS~-----DViHs-------f~iP~lg----------------------------------~k~ 221 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTAT-----DVIHA-------WTIPAFA----------------------------------VKQ 221 (298)
T ss_dssp SSCEEEESSSEEEEEEEES-----SSCEE-------EEEGGGT----------------------------------EEE
T ss_pred cceEEEEcCCEEEEEEEeC-----Cccce-------eeEcccC----------------------------------ceE
Confidence 3568999999999999987 34544 4441111 122
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhh-hcCceEEEEeccC
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHT-ETGMNTVFQVGDR 575 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~-~~GM~~~~~V~~~ 575 (613)
| .+ ||-...+.|.++.||.+...|.-.--. ...|-..++|..+
T Consensus 222 d--ai-PG~~n~~~~~~~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 222 D--AV-PGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp E--EC-TTCCEEEEEECSSSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred E--ec-CCceEEEEEEeCCCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 2 22 355668899999999999999854422 2357777776543
No 144
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=32.10 E-value=1.2e+02 Score=25.47 Aligned_cols=68 Identities=9% Similarity=0.013 Sum_probs=39.1
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccc--------cccCCCCCeEEEEEeecCCCce
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLT--------QCPIIPETTYRYKFPAMPYGTF 141 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vt--------q~pI~pG~~~~Y~f~~~~~GT~ 141 (613)
|-+|.++.||++.|.|.-+-. ...+-......-....-.+|...++ .-.+..|....+.|+|..+|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPt-TGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPT-TGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKPRKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTT-SSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEECSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCC-CCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEEeCCceE
Confidence 457999999999999986554 4444444431100000112211100 1125567788999999888863
No 145
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=31.41 E-value=97 Score=26.48 Aligned_cols=18 Identities=22% Similarity=0.600 Sum_probs=15.9
Q ss_pred ccccCCCCCeEEEEEeec
Q psy4302 119 TQCPIIPETTYRYKFPAM 136 (613)
Q Consensus 119 tq~pI~pG~~~~Y~f~~~ 136 (613)
+.|||.+|+.++|.+...
T Consensus 76 ~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 76 MKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp SCSSBCTTCEEEEEEEEE
T ss_pred ccCcccCCEEEEEEEEeE
Confidence 689999999999998764
No 146
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=30.07 E-value=1.4e+02 Score=25.42 Aligned_cols=61 Identities=13% Similarity=0.101 Sum_probs=39.4
Q ss_pred CCcEE--EEEEEecCCCCCcEEEEEeceeeEEE--EeCCcccc--------eeeeeEEEEccceeeeecccEEEEccC
Q psy4302 239 KGLRH--RFRIIGGSCLACPMLFFVEKHRMNLI--TVDGTPVQ--------PQMFDSITIFPGQYTPVNSAIVLNINL 304 (613)
Q Consensus 239 ~G~~~--rlRliN~~~~~~~~~~~i~gh~~~vi--a~DG~~v~--------P~~~d~l~l~pgeR~~~~~dv~v~a~~ 304 (613)
.|+.+ .|.+.|.+...+.+.|. .|+++.++ ..+|+.+- ........|.|||.. .+-...++
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~-Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~----~f~~~w~~ 88 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFS-TGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETY----DFSDVWKE 88 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEES-SSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEE----EEEEEESS
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeC-CCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEE----EEEEEeCC
Confidence 44444 67788999865444433 46654444 44576552 335678899999999 77777763
No 147
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=29.68 E-value=48 Score=28.06 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=0.0
Q ss_pred EEEeecCCCceEEeecCcccccCCceeeE-EEeCCCCCCCCCCC
Q psy4302 131 YKFPAMPYGTFFYHSHIGFQKMDGLEGPL-VIRRPKKADPNRDQ 173 (613)
Q Consensus 131 Y~f~~~~~GT~wyH~H~~~q~~~Gl~G~l-iV~~~~~~~p~~~~ 173 (613)
..++++.+|++||-|-.+.|=..||..++ .|.......+....
T Consensus 72 ~~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~~~~~~~~ 115 (116)
T 1x9u_A 72 VKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGATPG 115 (116)
T ss_dssp EEEECCSCEEEEEECCSTTTTTTTCEEEEEEECC----------
T ss_pred eEEEECCCCCEEEECCCCCccccCCEEEEEEECCCCCCCCCCCC
No 148
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=29.33 E-value=73 Score=31.07 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=50.4
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC--cccc
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI--GFQK 151 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~--~~q~ 151 (613)
..|.+..|+.|++.+++..- -++...-.+.. +.-+-||..-...|.++++|+|+..|.- |..-
T Consensus 171 n~l~lP~g~~v~~~~tS~DV--iHsf~ip~l~~-------------k~da~PG~~n~~~~~~~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV--IHSWTVPAFGV-------------KQDAVPGRLAQLWFRAEREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS--CEEEEEGGGTE-------------EEEECBTCCEEEEEECCSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECcc--cceeeecccCc-------------eEEecCCceeEEEEecCCcEEEEEEChHhcccCc
Confidence 35999999999999998743 33333322211 1135578888899999999999999973 3322
Q ss_pred cCCceeeEEEeCC
Q psy4302 152 MDGLEGPLVIRRP 164 (613)
Q Consensus 152 ~~Gl~G~liV~~~ 164 (613)
+ .|.+.++|.++
T Consensus 236 ~-~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 A-YMPITVKVVSE 247 (262)
T ss_dssp G-GCCEEEEEECH
T ss_pred c-cCeEEEEEEcH
Confidence 2 35666666544
No 149
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=27.67 E-value=1.5e+02 Score=27.68 Aligned_cols=74 Identities=18% Similarity=0.146 Sum_probs=49.0
Q ss_pred EEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCccc
Q psy4302 451 EIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKD 530 (613)
Q Consensus 451 ~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~kD 530 (613)
+.+.+|.|+.|++.|.+. . ..| .|+|-+.+. ..|
T Consensus 41 n~l~lP~g~~V~~~lTS~-D----ViH-------SF~IP~lgv----------------------------------K~d 74 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-S----VMH-------SFFIPRLGS----------------------------------QIY 74 (205)
T ss_dssp SEEEEETTSCEEEEEEES-S----SCE-------EEEEGGGTE----------------------------------EEE
T ss_pred ceEEEeCCCEEEEEEecC-C----cee-------eEEecccCc----------------------------------EEE
Confidence 468999999999999887 3 343 455522111 122
Q ss_pred eEEcCCCcEEEEEEEecCcceeEEeechhhhhh-cCceEEEEec
Q psy4302 531 TVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTE-TGMNTVFQVG 573 (613)
Q Consensus 531 Tv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~~-~GM~~~~~V~ 573 (613)
.+ ||-...+.|.++.||.+...|--.-... ..|-..+.|.
T Consensus 75 --ai-PGr~n~l~~~~~~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 75 --AM-AGMQTRLHLIANEPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp --EC-TTCCEEEEECCSSSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred --ec-CCceEEEEEEeCCCeEEEEEcccccccchhhceEEEEEE
Confidence 22 3566688899999999999998654332 3466666654
No 150
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=25.95 E-value=94 Score=30.91 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=50.9
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC--cccc
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI--GFQK 151 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~--~~q~ 151 (613)
..|.+..|+.|++.+++..- -++...-.+.. +--+-||..-...|.++++|+|+..|.- |..
T Consensus 189 N~lvlP~g~~V~~~ltS~DV--iHsf~iP~lg~-------------k~daiPG~~n~~~~~~~~~G~y~g~CsE~CG~~- 252 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDV--IHAWTIPAFAV-------------KQDAVPGRIAQLWFSVDQEGVYFGQCSELCGIN- 252 (298)
T ss_dssp SCEEEESSSEEEEEEEESSS--CEEEEEGGGTE-------------EEEECTTCCEEEEEECSSSEEEEECCCSCCSTT-
T ss_pred ceEEEEcCCEEEEEEEeCCc--cceeeEcccCc-------------eEEecCCceEEEEEEeCCCEEEEEEcccccCcC-
Confidence 46999999999999999643 33322222211 1125688888899999999999999973 322
Q ss_pred cCCceeeEEEeCC
Q psy4302 152 MDGLEGPLVIRRP 164 (613)
Q Consensus 152 ~~Gl~G~liV~~~ 164 (613)
-..|.+.+.|.++
T Consensus 253 Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 253 HAYMPIVVKAVSQ 265 (298)
T ss_dssp TTSCCEEEEEECH
T ss_pred ccCCeeEEEEEcH
Confidence 2246667776654
No 151
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=25.08 E-value=46 Score=34.23 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=28.9
Q ss_pred CCCCCCccccccCCCCCeEEEEEee--cCCCceEEeecCcccccCC
Q psy4302 111 HSDGVPLLTQCPIIPETTYRYKFPA--MPYGTFFYHSHIGFQKMDG 154 (613)
Q Consensus 111 ~~DGv~~vtq~pI~pG~~~~Y~f~~--~~~GT~wyH~H~~~q~~~G 154 (613)
|+-|.|......|..|+.+.|+..+ ..+|+| |-|...++.++
T Consensus 100 ~ing~p~~~s~~l~~G~~Y~fki~lkaR~PG~~--HVH~~lNV~~~ 143 (419)
T 3rfr_A 100 FIGEQFAPRSVSLEIGKDYAFSINLRGRRAGRW--HVHAQINVEGG 143 (419)
T ss_dssp EETTEECSSCBCCCTTCEEEEEEEEEECSCEEE--EEEEEEEETTT
T ss_pred hhcCcCCcceEEecCCCeEeEEEEEecccCccc--ccceeEeeccC
Confidence 3444444444579999999988855 589995 88876666553
No 152
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=24.32 E-value=86 Score=26.96 Aligned_cols=47 Identities=13% Similarity=-0.006 Sum_probs=31.5
Q ss_pred EEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccc----eeeeeEEEEccceee
Q psy4302 242 RHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQ----PQMFDSITIFPGQYT 292 (613)
Q Consensus 242 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pgeR~ 292 (613)
.|++||-|.+.. +.. |-...+.+.+.||..-+ .+....=.|.|||.+
T Consensus 31 aY~I~I~N~~~~--~vQ--L~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f 81 (126)
T 1xvs_A 31 AYLITIKNLSSQ--TVQ--LMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEY 81 (126)
T ss_dssp EEEEEEEECSSS--CEE--EEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEE
T ss_pred EEEEEEEECCCC--CEE--EEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCce
Confidence 589999999965 344 66777888887775432 111223368888888
No 153
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=23.85 E-value=96 Score=30.22 Aligned_cols=76 Identities=14% Similarity=0.209 Sum_probs=49.6
Q ss_pred eEEEEecCCCEEEEEEEeCCCCCCCCCCCeeeecCcEEEEEeccCCCcccccccccchHHhhhccCCCCCCCCCCCCCcc
Q psy4302 450 VEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVK 529 (613)
Q Consensus 450 ~~~~~v~~g~~ve~vl~N~~~~~~~~~HPfHLHG~~F~Vl~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~k 529 (613)
.+.+.+|.|+.|++.+.+. +..|. |+|-+.| ...
T Consensus 170 dn~l~lP~g~~v~~~~tS~-----DViHs-------f~ip~l~----------------------------------~k~ 203 (262)
T 2gsm_B 170 DTAMVVPVNKTVVVQVTGA-----DVIHS-------WTVPAFG----------------------------------VKQ 203 (262)
T ss_dssp SSCEEEETTSEEEEEEEES-----SSCEE-------EEEGGGT----------------------------------EEE
T ss_pred cceEEEecCCEEEEEEEEC-----cccce-------eeecccC----------------------------------ceE
Confidence 3568999999999999877 34444 4442111 122
Q ss_pred ceEEcCCCcEEEEEEEecCcceeEEeechhhhh-hcCceEEEEecc
Q psy4302 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHT-ETGMNTVFQVGD 574 (613)
Q Consensus 530 DTv~Vp~~g~~vIrf~adNPG~Wl~HCHi~~H~-~~GM~~~~~V~~ 574 (613)
| .+| |-...+.|.++.||.+...|--.... ...|-..++|..
T Consensus 204 d--a~P-G~~n~~~~~~~~~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 204 D--AVP-GRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp E--ECB-TCCEEEEEECCSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred E--ecC-CceeEEEEecCCcEEEEEEChHhcccCcccCeEEEEEEc
Confidence 3 222 55668889999999999999764432 234666666644
No 154
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=23.48 E-value=92 Score=27.10 Aligned_cols=47 Identities=15% Similarity=0.087 Sum_probs=31.4
Q ss_pred EEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccc----eeeeeEEEEccceee
Q psy4302 242 RHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQ----PQMFDSITIFPGQYT 292 (613)
Q Consensus 242 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pgeR~ 292 (613)
.|++||-|.+.. +.. |-...+.+.+.||...+ .+....=.|.|||.+
T Consensus 31 aY~ItI~N~~~~--~vQ--L~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F 81 (134)
T 1tza_A 31 SYTITIINLGEQ--AAK--LETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAY 81 (134)
T ss_dssp EEEEEEEECSSS--CEE--EEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEE
T ss_pred EEEEEEEeCCCC--CEE--EEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCce
Confidence 589999999965 344 66677888787775432 112223468888887
No 155
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=21.98 E-value=99 Score=26.59 Aligned_cols=47 Identities=15% Similarity=0.166 Sum_probs=31.0
Q ss_pred EEEEEEEecCCCCCcEEEEEeceeeEEEEeCCcccc----eeeeeEEEEccceee
Q psy4302 242 RHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQ----PQMFDSITIFPGQYT 292 (613)
Q Consensus 242 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~d~l~l~pgeR~ 292 (613)
.|++||-|.+.. +.. |-...+.+.+.||..-+ .+....=.|.|||.+
T Consensus 32 aY~I~I~N~~~~--~vQ--L~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f 82 (127)
T 2f1e_A 32 AYSIRIQNAGAV--PAR--LVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAF 82 (127)
T ss_dssp EEEEEEEECSSS--CEE--EEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEE
T ss_pred EEEEEEEeCCCC--CEE--EEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCce
Confidence 589999999965 344 66677777777775432 112223368888888
No 156
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=21.16 E-value=3.2e+02 Score=23.39 Aligned_cols=65 Identities=11% Similarity=0.158 Sum_probs=37.4
Q ss_pred CCeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCC--------CccccccCCCCCeEEEEEeecCCCce
Q psy4302 73 SPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGV--------PLLTQCPIIPETTYRYKFPAMPYGTF 141 (613)
Q Consensus 73 GP~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv--------~~vtq~pI~pG~~~~Y~f~~~~~GT~ 141 (613)
|=+|.++.||++.|.|.-+-. ...+-..-.... ..-.|++ |.. .-.+..|.+..+.|+|..+|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPT-TGY~W~~~~~~~--~~L~~~~~~v~~~y~p~~-~~~vGagG~~~w~f~A~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPT-TGFAWYFEGGTK--ESPNESMFTVENKYFPPD-SKLLGAGGTEHFHVTVKAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGG-GSCEEEBTTTBS--SCSCTTTEEEEEEEECCT-TCCTTCCEEEEEEEEECSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCC-CCeEEEEecCCC--ccccccceeecceeeeCC-CCCcCCCcEEEEEEEEccCceE
Confidence 558999999999999986543 333333322110 0011222 110 1135566788888888888863
No 157
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=21.13 E-value=1.1e+02 Score=28.96 Aligned_cols=75 Identities=13% Similarity=0.037 Sum_probs=49.2
Q ss_pred CeEEEecCCEEEEEEEECCCCCceeEEeCCCcccCCCCCCCCCccccccCCCCCeEEEEEeecCCCceEEeecC--cccc
Q psy4302 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHI--GFQK 151 (613)
Q Consensus 74 P~i~v~~Gd~v~v~v~N~l~~~~~tiHwHGl~~~~~~~~DGv~~vtq~pI~pG~~~~Y~f~~~~~GT~wyH~H~--~~q~ 151 (613)
..+.+..|..|++.+....- -++...-.+..+ +| .-||..-...|.++++|+|+..|.- |..-
T Consensus 140 n~lvlP~~~~Vr~~vtS~DV--iHsf~vP~lg~K----~D---------aiPGr~n~~~~~~~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSEDV--LHSWAVPSLGLK----TD---------AIPGRLNQTTLMSSRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEESSS--CEEEEEGGGTEE----EE---------ECTTCCEEEEECCSSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeCcc--cceeeecccCcE----EE---------ecCCceEEEEEecCCcEEEEEEehhhccccc
Confidence 57999999999999998642 333333322211 23 4578888889999999999999972 3222
Q ss_pred cCCceeeEEEeCC
Q psy4302 152 MDGLEGPLVIRRP 164 (613)
Q Consensus 152 ~~Gl~G~liV~~~ 164 (613)
+ -|-+.+.+.++
T Consensus 205 s-~M~~~v~vv~~ 216 (227)
T 1v54_B 205 S-FMPIVLELVPL 216 (227)
T ss_dssp G-GCCEEEEEECH
T ss_pred c-cCeEEEEEEcH
Confidence 2 24455555443
Done!