RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4302
(613 letters)
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 130
Score = 118 bits (297), Expect = 4e-32
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRV----VTIHWHGVYQRHTP 110
V+ DG R + +N PSP I +GD ++V + + + +IHWHG +Q T
Sbjct: 15 VSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTN 74
Query: 111 HSDGVPLLTQCPIIPETTYRYKFPAM-PYGTFFYHSHIGFQKMDGLEGPLVIRRPK 165
+DG + QCPI ++ Y F GTF+YHSH+ Q DGL GP V+ PK
Sbjct: 75 WADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130
Score = 26.1 bits (57), Expect = 6.1
Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 534 IPPNGYTVVRVHF-NNPGIWIMHCHFIFHTETGMNTVFQVGDRK 576
I + H + G + H H G+ F V D K
Sbjct: 87 IASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 131
Score = 115 bits (289), Expect = 4e-31
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 53 GCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD----RVVTIHWHGVYQRH 108
V+ DG R + +N + P I+ + D ++V N + + R +IHWHG++QR
Sbjct: 14 ANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG 72
Query: 109 TPHSDGVPLLTQCPIIPETTYRYKFP-AMPYGTFFYHSHIGFQKMDGLEGPLVIRRPK 165
T +DG + QCPI P + YKF A GTF+YHSH G Q DGL GP+VI
Sbjct: 73 TNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 136
Score = 115 bits (288), Expect = 7e-31
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 55 VTADGV-ERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVD----RVVTIHWHGVYQRHT 109
+ DG R +T +P I D ++V +++ D R +IHWHG +Q T
Sbjct: 14 LDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGT 73
Query: 110 PHSDGVPLLTQCPIIPETTYRYKFPA-MPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKAD 168
DG + QCPIIP ++ Y F GT++YHSH+ Q DGL G V+ P D
Sbjct: 74 TEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--D 131
Query: 169 PNRD 172
P+
Sbjct: 132 PHLS 135
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 129
Score = 110 bits (276), Expect = 2e-29
Identities = 45/111 (40%), Positives = 66/111 (59%)
Query: 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDG 114
+ E ++ IN + P P+I+ GD++VV++ NK+ V IHWHG+ QR TP +DG
Sbjct: 15 WAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADG 74
Query: 115 VPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPK 165
++QC I P T+ Y F GTFFYH H+G Q+ GL G L++ P+
Sbjct: 75 TASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125
Score = 33.1 bits (75), Expect = 0.029
Identities = 9/51 (17%), Positives = 13/51 (25%)
Query: 526 PCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRK 576
I P +NPG + H H G+ V +
Sbjct: 75 TASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 162
Score = 93.3 bits (231), Expect = 7e-23
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 14 CDGAKPMVCY--YHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGV-ERPILTINRR 70
C+ C+ +Y P G + + + DGV + ++ IN
Sbjct: 4 CNTPSNRACWSDGFDINTDYEVSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGN 63
Query: 71 LPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIP-ETTY 129
+ P+I GDT+ V V N +V +IHWHG++Q+ T DG +T+CPI P
Sbjct: 64 IMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQR 123
Query: 130 RYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKA 167
Y++ A YGT +YHSH Q +G+ G + I P
Sbjct: 124 TYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPASL 161
Score = 33.2 bits (75), Expect = 0.046
Identities = 9/44 (20%), Positives = 11/44 (25%)
Query: 534 IPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKD 577
P G R G H HF G+ Q+
Sbjct: 117 PPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 214
Score = 91.5 bits (226), Expect = 1e-21
Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 26/202 (12%)
Query: 405 NNISLGILPFPILSQDLPIPKEMEC------PKDRSVCGKSAEKGGKLCECVEIIKVGLN 458
N++SL + P P L + K + + +
Sbjct: 27 NDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIG 86
Query: 459 QVAEIIFIDW--IGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGP 516
+V ++I + + + HP HLHG D +++ G + + +
Sbjct: 87 EVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEES-------------- 132
Query: 517 DLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRK 576
+ P +++TV I P G+T +R +NPG+W HCH H GM VF G
Sbjct: 133 ---SLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE- 188
Query: 577 DFVQTPPEFPTCNNYLPPVDPN 598
+ P + C + N
Sbjct: 189 KVGRIPTKALACGGTAKSLINN 210
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 159
Score = 85.9 bits (212), Expect = 2e-20
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 10/114 (8%)
Query: 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDG 114
+ G +T N +P P++ V GD + + + N H V
Sbjct: 46 IDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA----TNAMPHNVEFHGAT--GA 99
Query: 115 VPLLTQCPIIPETTYRYKFPAMPYGTFFYHSH----IGFQKMDGLEGPLVIRRP 164
+ + P +F A GTF YH + + + G+ G L++
Sbjct: 100 LGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR 153
Score = 30.5 bits (68), Expect = 0.32
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 533 TIPPNGYTVVRVHFNNPGIWIMHCHFI----FHTETGMNTVFQVGDRKDFVQTP 582
+ P +R + G ++ HC +H +GM+ V +D ++ P
Sbjct: 107 NVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMV-LPRDGLKDP 159
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 84.7 bits (209), Expect = 5e-20
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 57 ADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVP 116
DGVE T + +P I+V GDT+ V+ N + H V G
Sbjct: 41 DDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSN----NPSSTVPHNVDFHAATGQGGGA 96
Query: 117 LLTQCPIIPETTYRYKFPAMPYGTFFYHSH---IGFQKMDGLEGPLVIRRPKKADP 169
P T + F A+ G + YH +G +G+ G +++ PK+ P
Sbjct: 97 --AATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILV-EPKEGLP 149
Score = 33.9 bits (77), Expect = 0.019
Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Query: 534 IPPNGYTVVRVHFNNPGIWIMHCHF---IFHTETGMNTVFQVGDRK 576
P + PG++I HC H GM + V ++
Sbjct: 101 TAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKE 146
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 180
Score = 85.5 bits (211), Expect = 5e-20
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 19/125 (15%)
Query: 71 LPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVY----QRHTPHSDGVPLLTQC--PII 124
L P++ GD + V KNK + ++IH G+ +SD + + +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115
Query: 125 PETTYRYKFPA----------MPYGTFFYHSHIGFQK--MDGLEGPLVIRRPKKADPNRD 172
P Y Y++ P T Y+S++ + GL GPL+I + +
Sbjct: 116 PGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGT 175
Query: 173 QYDTD 177
Q +
Sbjct: 176 QKMFE 180
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 216
Score = 86.1 bits (212), Expect = 8e-20
Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Query: 458 NQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPD 517
+Q + + + HPMHLHG D ++ + A + FV LAR D
Sbjct: 69 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 128
Query: 518 LATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVF-----QV 572
P +DT +P G+ ++ +NPG W+ HCH +H G++ F +
Sbjct: 129 -------NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADL 181
Query: 573 GDRKDFVQTPPEFPTCNNYLPPVDPNEFKNID 604
R C+ + N + ID
Sbjct: 182 RQRISQEDEDDFNRVCDEWRAYWPTNPYPKID 213
Score = 26.8 bits (58), Expect = 6.4
Identities = 8/41 (19%), Positives = 12/41 (29%)
Query: 125 PETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPK 165
F G + +H HI + GL + R
Sbjct: 140 AGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD 180
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 154
Score = 83.6 bits (206), Expect = 1e-19
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 8/104 (7%)
Query: 472 TSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDT 531
+ HP+HLH ++++ +A + P + KDT
Sbjct: 58 PTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPS-------EKGWKDT 110
Query: 532 VTIPPNGYTVVRVHF-NNPGIWIMHCHFIFHTETGMNTVFQVGD 574
+ + F G ++ HCH + H + M + D
Sbjct: 111 IQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDITD 154
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 170
Score = 82.1 bits (202), Expect = 7e-19
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 168 DPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTS 227
DP+ +YD D S I +TDW H F ++ LING ++
Sbjct: 1 DPHASRYDVDNESTVITLTDWYHT------AARLGPRFPLGADATLINGLGRS----AST 50
Query: 228 NPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIF 287
+ V G R+RFR++ SC F ++ H + +I VDG QP + DSI IF
Sbjct: 51 PTAALAVINVQHGKRYRFRLVSISCD-PNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIF 109
Query: 288 PGQYTPV 294
Q
Sbjct: 110 AAQRYSF 116
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 192
Score = 82.1 bits (202), Expect = 1e-18
Identities = 30/121 (24%), Positives = 41/121 (33%), Gaps = 19/121 (15%)
Query: 71 LPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQR----HTPHSDGVP--LLTQCPII 124
P I+ GD + V +KN R T H HG+ + D +
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLA-SRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVY 131
Query: 125 PETTYRYKFPA----------MPYGTFFYHSHIGF--QKMDGLEGPLVIRRPKKADPNRD 172
P Y Y A T YHSHI GL GPL+I + D ++
Sbjct: 132 PGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKE 191
Query: 173 Q 173
+
Sbjct: 192 K 192
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 207
Score = 82.4 bits (203), Expect = 1e-18
Identities = 28/136 (20%), Positives = 42/136 (30%), Gaps = 23/136 (16%)
Query: 60 VERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGV----------YQRHT 109
ER + + P I GDTI V NK ++I GV Y +
Sbjct: 72 KERGPEEEHLGILGPVIWAEVGDTIRVTFHNKG-AYPLSIEPIGVRFNKNNEGTYYSPNY 130
Query: 110 PHSDGVPLLTQCPIIPETTYRYKFPAMPYG----------TFFYHSHIGFQK--MDGLEG 157
+ + P T+ Y++ Y+S + K GL G
Sbjct: 131 NPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIG 190
Query: 158 PLVIRRPKKADPNRDQ 173
P+ I + N Q
Sbjct: 191 PMKICKKGSLHANGRQ 206
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 168
Score = 79.3 bits (195), Expect = 6e-18
Identities = 43/121 (35%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 174 YDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYS 233
YD D S I I DW H ++ FP A ++ LING + + +
Sbjct: 1 YDVDDASTVITIADWYHSLSTVLFPNPNKAPPAP--DTTLINGLGRNSAN---PSAGQLA 55
Query: 234 KFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTP 293
V G R+RFRI+ SC F ++ HRM +I VDG QP DS+TIF GQ
Sbjct: 56 VVSVQSGKRYRFRIVSTSCF-PNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYS 114
Query: 294 V 294
V
Sbjct: 115 V 115
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 172
Score = 78.2 bits (192), Expect = 1e-17
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 169 PNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSN 228
P+ YD D + I + DW H + ++ LING+ + G
Sbjct: 1 PHAALYDEDDENTIITLADWYHIPAPSIQGAAQP-------DATLINGKGRYVGGPAAEL 53
Query: 229 PVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFP 288
+ V +G ++R R+I SC F ++ H + +I VDG +P D + IF
Sbjct: 54 SI----VNVEQGKKYRMRLISLSCD-PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFT 108
Query: 289 GQ 290
GQ
Sbjct: 109 GQ 110
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 181
Score = 77.9 bits (191), Expect = 3e-17
Identities = 23/140 (16%), Positives = 36/140 (25%), Gaps = 29/140 (20%)
Query: 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRV------------------ 96
+ D + N P P+I+V R + + V N +
Sbjct: 38 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEP 97
Query: 97 ---VTIHWHGVYQRHTPHSDGVPLLTQCPIIP---ETTYRYKFPA-MPYGTFFYHSH--- 146
+H HG ++ Y +P +YH H
Sbjct: 98 EVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMA 157
Query: 147 -IGFQKMDGLEGPLVIRRPK 165
GL G +I PK
Sbjct: 158 LTRLNVYAGLVGAYIIHDPK 177
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 157
Score = 76.3 bits (187), Expect = 5e-17
Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 10/118 (8%)
Query: 51 KKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTP 110
KK + +G E +T N +P P + V D + + + N H +
Sbjct: 41 KKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----TNTLLHNIDFHAAT 96
Query: 111 HSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSH----IGFQKMDGLEGPLVIRRP 164
+ + P +F A G F YH + + G+ G +++
Sbjct: 97 --GALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPR 152
Score = 27.8 bits (61), Expect = 2.3
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 533 TIPPNGYTVVRVHFNNPGIWIMHCHFI----FHTETGMNTVFQVGDR 575
+ P T +R PG+++ HC +H +GMN V R
Sbjct: 106 QVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPR 152
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 140
Score = 75.6 bits (185), Expect = 6e-17
Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 55 VTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDG 114
T G N L P++++ RG + VD+ N++ + T+HWHG+ DG
Sbjct: 27 STFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEE-TTLHWHGLEV--PGEVDG 83
Query: 115 VPLLTQCPIIPETTYRYKFPA-MPYGTFFYHSH----IGFQKMDGLEGPLVIRRP 164
P Q I P P T ++H H G Q GL G +VI
Sbjct: 84 GP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDD 135
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 181
Score = 76.7 bits (188), Expect = 6e-17
Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 174 YDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYS 233
YD D ITD+ + D +++ LING +V N + Y+
Sbjct: 1 YDID--LGVFPITDYYYRAADDLVHFTQNNAPPF-SDNVLINGTAV----NPNTGEGQYA 53
Query: 234 KFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTP 293
+ G RHR RI+ S + H M +I D PV DS+ + GQ
Sbjct: 54 NVTLTPGKRHRLRILNTST-ENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYD 112
Query: 294 V 294
V
Sbjct: 113 V 113
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 179
Score = 76.2 bits (187), Expect = 8e-17
Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 22/116 (18%)
Query: 60 VERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLT 119
VER + + P + GD + + KN R +IH HGV +
Sbjct: 72 VERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQTESSTV-------- 122
Query: 120 QCPIIPETTYRYKFPAMPYG----------TFFYHSHIGFQK--MDGLEGPLVIRR 163
P +P T Y + + Y+S + K GL GPL++ R
Sbjct: 123 -TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCR 177
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 200
Score = 76.4 bits (187), Expect = 1e-16
Identities = 36/158 (22%), Positives = 54/158 (34%), Gaps = 33/158 (20%)
Query: 446 LCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVG 505
L + ++ NQV E++ HP HLHG ++
Sbjct: 65 LLPAGSVYELPRNQVVELVVPA---GVLGGPHPFHLHGHAFSVVRSAGSST--------- 112
Query: 506 KLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTV-VRVHFNNPGIWIMHCHFIFHTET 564
+ ++ +D V++ G V +R +NPG W HCH FH
Sbjct: 113 ----------YNFVNPVK-----RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMN 157
Query: 565 GMNTVFQV--GDRKDFVQTPPEF-PTCNNY--LPPVDP 597
G+ VF + D P E+ C Y LPP
Sbjct: 158 GLAIVFAEDMANTVDANNPPVEWAQLCEIYDDLPPEAT 195
Score = 31.0 bits (69), Expect = 0.33
Identities = 27/149 (18%), Positives = 39/149 (26%), Gaps = 25/149 (16%)
Query: 63 PILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVV--------TIHWHGVYQRHTPHSDG 114
+L I S + + G + + V H HG +
Sbjct: 51 TLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGS 110
Query: 115 VPLLTQCPII--------PETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKK 166
P+ +F G +F+H HI F M+GL
Sbjct: 111 STYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT 170
Query: 167 ADPNR---------DQYDTDYPSHTIIIT 186
D N + YD P T I T
Sbjct: 171 VDANNPPVEWAQLCEIYDDLPPEATSIQT 199
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 153
Score = 74.4 bits (182), Expect = 2e-16
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 11/113 (9%)
Query: 57 ADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVP 116
+ +T + +P P + V GD + + + N H + + G
Sbjct: 45 DEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLIN----PPENTMPHNIDFHAATGALGGG 100
Query: 117 LLTQCPIIPETTYRYKFPAMPYGTFFYHSHIG-----FQKMDGLEGPLVIRRP 164
LT I P +F A G F YH G + + G+ G +++
Sbjct: 101 GLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 151
Score = 26.6 bits (58), Expect = 6.5
Identities = 11/50 (22%), Positives = 16/50 (32%), Gaps = 5/50 (10%)
Query: 528 VKDTVTIPPNGYTVVRVHFNNPGIWIMHCHF-----IFHTETGMNTVFQV 572
I P V+R G ++ HC +H +GM V
Sbjct: 99 GGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMV 148
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId:
920]}
Length = 153
Score = 74.1 bits (181), Expect = 3e-16
Identities = 16/106 (15%), Positives = 29/106 (27%), Gaps = 6/106 (5%)
Query: 62 RPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRV--VTIHWHG--VYQRHTPHSDGVPL 117
P ++ +P++++ G T+ V N I G
Sbjct: 49 FPSFEVHD-KKNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGT 107
Query: 118 LTQCPIIPETTYRYKFP-AMPYGTFFYHSHIGFQKMDGLEGPLVIR 162
F GT++Y I G G +V++
Sbjct: 108 GFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153
Score = 32.9 bits (74), Expect = 0.051
Identities = 6/45 (13%), Positives = 10/45 (22%), Gaps = 1/45 (2%)
Query: 529 KDTVTIPPNGYTVVRVHF-NNPGIWIMHCHFIFHTETGMNTVFQV 572
+ + + G + C H TG V
Sbjct: 108 GFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 199
Score = 72.6 bits (177), Expect = 3e-15
Identities = 32/149 (21%), Positives = 41/149 (27%), Gaps = 25/149 (16%)
Query: 446 LCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVG 505
L + + + EI HP HLHG ++
Sbjct: 65 LLPAGSVYPLPAHSTIEITLPATA-LAPGAPHPFHLHGHAFAVVRSA------------- 110
Query: 506 KLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETG 565
V T T +R +NPG W +HCH FH E G
Sbjct: 111 --------GSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAG 162
Query: 566 MNTVF--QVGDRKDFVQTPPEFP-TCNNY 591
VF V D K P + C Y
Sbjct: 163 FAIVFAEDVADVKAANPVPKAWSDLCPIY 191
Score = 29.4 bits (65), Expect = 0.83
Identities = 15/98 (15%), Positives = 19/98 (19%), Gaps = 10/98 (10%)
Query: 84 IVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPII----------PETTYRYKF 133
I + H HG + PI +F
Sbjct: 82 ITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRF 141
Query: 134 PAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNR 171
G +F H HI F G N
Sbjct: 142 QTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAANP 179
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 209
Score = 69.9 bits (170), Expect = 3e-14
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 19/133 (14%)
Query: 173 QYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGT--RTESFLINGRSVFKSGNG----- 225
YD + ++++DW H + G + ++ L+NGR F
Sbjct: 3 HYDGEIN---LLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDS 59
Query: 226 --------TSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQ 277
S F V+ +R RI + L + F + H++ ++ DG VQ
Sbjct: 60 NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQ 118
Query: 278 PQMFDSITIFPGQ 290
P I I+ G+
Sbjct: 119 PFYTSDIDIYSGE 131
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 181
Score = 64.3 bits (156), Expect = 1e-12
Identities = 27/123 (21%), Positives = 38/123 (30%), Gaps = 31/123 (25%)
Query: 453 IKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLA 512
Q + G LHP H+HGT I+ + P A +
Sbjct: 87 FAAAKGQYERWVIS---GVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGW--------- 134
Query: 513 REGPDLATKIRPQPCVKDTVTIPPNGYTVV---RVHFNNPGIWIMHCHFIFHTETGMNTV 569
KDTV + N V+ ++ HCH + H +TGM
Sbjct: 135 ----------------KDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLG 178
Query: 570 FQV 572
F V
Sbjct: 179 FTV 181
Score = 32.3 bits (73), Expect = 0.088
Identities = 13/108 (12%), Positives = 29/108 (26%), Gaps = 12/108 (11%)
Query: 66 TINRR---LPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCP 122
IN + + P +G + + H HG R + P +
Sbjct: 74 KINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAG 133
Query: 123 ------IIPETTY---RYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVI 161
+ + ++ A + H H+ + G+ +
Sbjct: 134 WKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 181
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 139
Score = 62.1 bits (150), Expect = 3e-12
Identities = 15/91 (16%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 72 PSPSIQVCRGDTIVVDVKNKI-VDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYR 130
P +++ + + + + N + +H+HG Q + L P++P +
Sbjct: 50 NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHG--QTLLENGTQQHQLGVWPLLPGSFKT 107
Query: 131 YKFPAMPYGTFFYHSHIGFQKMDGLEGPLVI 161
+ A G + + +G + G++ P +I
Sbjct: 108 LEMKASKPGWWLLDTEVGEIQRAGMQTPFLI 138
Score = 56.0 bits (134), Expect = 5e-10
Identities = 8/44 (18%), Positives = 16/44 (36%)
Query: 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572
+ P + + + + PG W++ GM T F +
Sbjct: 95 LGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLI 138
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 149
Score = 62.1 bits (150), Expect = 5e-12
Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 5/101 (4%)
Query: 64 ILTINRRLPS--PSIQVCRGDTIVVDVKNKI-VDRVVTIHWHGVYQRHTPHSDGVPLLTQ 120
+ IN R+ + + GD + + + T+H+H GV
Sbjct: 48 MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFH--GHSFQYKHRGVYSSDV 105
Query: 121 CPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVI 161
I P T + G + H H+ G+E +
Sbjct: 106 FDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 146
Score = 56.7 bits (136), Expect = 3e-10
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574
D I P Y + + PGIW++HCH H GM T + V
Sbjct: 103 SDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQ 148
Score = 27.8 bits (61), Expect = 2.6
Identities = 8/54 (14%), Positives = 13/54 (24%), Gaps = 1/54 (1%)
Query: 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPP 583
+ + + V + G I FH + V D P
Sbjct: 58 NLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVY-SSDVFDIFP 110
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 190
Score = 60.7 bits (146), Expect = 3e-11
Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 32/154 (20%)
Query: 446 LCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVG 505
L +I + NQV EI HP HLHG + ++
Sbjct: 67 LLPGGAVISLPANQVIEISIPG------GGNHPFHLHGHNFDVVRTP------------- 107
Query: 506 KLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVV-RVHFNNPGIWIMHCHFIFHTET 564
+ +R D V+I G V R +NPG W +HCH +H E
Sbjct: 108 ------GSSVYNYVNPVRR-----DVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEA 156
Query: 565 GMNTVFQVGDRKDFVQTPPEFPTCNNYLPPVDPN 598
G+ VF + P ++ P + N
Sbjct: 157 GLAVVFAEDI-PNIPIANAISPAWDDLCPKYNAN 189
Score = 28.7 bits (63), Expect = 1.5
Identities = 14/82 (17%), Positives = 20/82 (24%), Gaps = 8/82 (9%)
Query: 98 TIHWHGVYQRHTPHSDGVPLLTQCPIIPET--------TYRYKFPAMPYGTFFYHSHIGF 149
H HG P+ + ++F G +F H HI +
Sbjct: 93 PFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDW 152
Query: 150 QKMDGLEGPLVIRRPKKADPNR 171
GL P N
Sbjct: 153 HLEAGLAVVFAEDIPNIPIANA 174
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 145
Score = 57.9 bits (139), Expect = 1e-10
Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 6/99 (6%)
Query: 66 TINRRLPS--PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPI 123
++N + P + +C+GD++V + + HG+Y + +
Sbjct: 49 SMNGFMYGNQPGLTMCKGDSVVWYLFS----AGNEADVHGIYFSGNTYLWRGERRDTANL 104
Query: 124 IPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIR 162
P+T+ GTF G++ +
Sbjct: 105 FPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKYTVN 143
Score = 52.8 bits (126), Expect = 7e-09
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572
+DT + P + + + G + + C H GM + V
Sbjct: 99 RDTANLFPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKYTV 142
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 165
Score = 58.1 bits (140), Expect = 1e-10
Identities = 14/112 (12%), Positives = 28/112 (25%), Gaps = 17/112 (15%)
Query: 182 TIIITDWLHGMTDAKFPGNTYAN--FGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNK 239
+I+ D G ++ L NG
Sbjct: 12 PVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA--------------IYPQHAAP 57
Query: 240 GLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPV-QPQMFDSITIFPGQ 290
R R++ G + + +I DG + +P + + G+
Sbjct: 58 RGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGE 109
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 116
Score = 56.2 bits (135), Expect = 2e-10
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 8/95 (8%)
Query: 66 TINRRLPS--PSIQVCRGDTIVVDVKNKIVDR-VVTIHWHGVYQRHTPHSDGVPLLTQCP 122
T+N + P I VC D I + + +IH++G ++
Sbjct: 25 TVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNG-----QVLEQNHHKISAIT 79
Query: 123 IIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEG 157
++ T+ P G + S I G++
Sbjct: 80 LVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQA 114
Score = 43.5 bits (102), Expect = 6e-06
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGM 566
+T+ T + + G W + H + GM
Sbjct: 76 SAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGM 112
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 146
Score = 55.3 bits (132), Expect = 1e-09
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 529 KDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGD 574
DT+ + P + NPG W++ C + H + G+ FQV +
Sbjct: 100 IDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 145
Score = 53.0 bits (126), Expect = 6e-09
Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 6/99 (6%)
Query: 66 TINRRLPS--PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPI 123
++N P + +C D + + + + H + ++ + +
Sbjct: 50 SVNGYTFGSLPGLSMCAEDRVKWYLFGMGNE----VDVHAAFFHGQALTNKNYRIDTINL 105
Query: 124 IPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIR 162
P T + A G + GL+ ++
Sbjct: 106 FPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQ 144
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 67
Score = 46.9 bits (111), Expect = 1e-07
Identities = 16/64 (25%), Positives = 22/64 (34%), Gaps = 12/64 (18%)
Query: 122 PIIPETTYRYKFPAMPYG----------TFFYHSHIGF--QKMDGLEGPLVIRRPKKADP 169
I P TY Y + A + Y+S + GL GPL+I R D
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK 61
Query: 170 NRDQ 173
+
Sbjct: 62 ETNM 65
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 174
Score = 47.0 bits (111), Expect = 9e-07
Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 9/118 (7%)
Query: 175 DTDYPSHTIIITDWLHGMTDA-KFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYS 233
+ D P ++ITD + +P + ++ F N +
Sbjct: 6 EYDVP---LLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPA---FCGETILVNGKVWP 59
Query: 234 KFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPV-QPQMFDSITIFPGQ 290
+V + ++RFR+I S L I DG + + +S ++ P +
Sbjct: 60 YLEV-EPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAE 116
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId:
1108]}
Length = 139
Score = 41.8 bits (97), Expect = 3e-05
Identities = 10/45 (22%), Positives = 14/45 (31%)
Query: 528 VKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQV 572
+ T + V PG ++ C F H GM V
Sbjct: 93 LAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTV 137
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 173
Score = 42.2 bits (99), Expect = 4e-05
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIF-HTETGMNTVFQV 572
+T IP F PG++ H + E G F+V
Sbjct: 114 ETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKV 157
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 40.5 bits (94), Expect = 1e-04
Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Query: 74 PSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDG---VPLLTQCPIIPETTYR 130
+++ G+T+ + V N + V + H G G + + +
Sbjct: 51 NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAI 110
Query: 131 YKFPAMPYGTFFYHSHIGFQKMD-GLEGPLVIRRPKKAD 168
+F G + H F+ + G G L + + +
Sbjct: 111 VEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAENPE 149
Score = 38.2 bits (88), Expect = 8e-04
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFH-TETGMNTVFQVGDRKD 577
+ +P G +V + PG + + H IF G +V ++
Sbjct: 99 QSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 177
Score = 38.7 bits (90), Expect = 6e-04
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 530 DTVTIPPNGYTVVRVHFNNPGIWIMHCHFIF-HTETGMNTVFQVGDRKD 577
+T I F PG++ H + E G +V + +
Sbjct: 114 ETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 162
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas
europaea [TaxId: 915]}
Length = 112
Score = 35.5 bits (81), Expect = 0.004
Identities = 23/108 (21%), Positives = 33/108 (30%), Gaps = 16/108 (14%)
Query: 55 VTADGVERPILTINRRLPSPS-IQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSD 113
+ +GV + L P + V +GD + V V+NK + G
Sbjct: 18 LNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENK------SPISEGFSIDAFGV-- 69
Query: 114 GVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVI 161
Q I T F A G F + K L G L +
Sbjct: 70 ------QEVIKAGETKTISFTADKAGAFTIWCQL-HPKNIHLPGTLNV 110
>d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 152
Score = 29.1 bits (65), Expect = 0.94
Identities = 9/49 (18%), Positives = 11/49 (22%)
Query: 94 DRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFF 142
D W G+Y + DG E Y G
Sbjct: 49 DLRGRFRWWGLYTQREQGYDGTWTGDDNIDKLEAKYFMMRVRCDGGALS 97
>d1nekd_ f.21.2.2 (D:) Succinate dehydrogenase subunit SdhD
{Escherichia coli [TaxId: 562]}
Length = 113
Score = 28.1 bits (63), Expect = 1.0
Identities = 8/43 (18%), Positives = 11/43 (25%), Gaps = 4/43 (9%)
Query: 532 VTIPPNGYTVVRVHFNNPGIWIMHCHFI----FHTETGMNTVF 570
T Y V F + + + H GM V
Sbjct: 36 ATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVL 78
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase,
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 453
Score = 28.4 bits (63), Expect = 2.9
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 226 TSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVD 272
T + +PYS + G+ H R S +A +E ++ +T D
Sbjct: 124 TPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGD 170
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC
{Bacillus subtilis [TaxId: 1423]}
Length = 319
Score = 28.0 bits (61), Expect = 3.6
Identities = 8/73 (10%), Positives = 15/73 (20%)
Query: 536 PNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPPEFPTCNNYLPPV 595
F H + N +FQ+ K + E + +
Sbjct: 113 ELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDL 172
Query: 596 DPNEFKNIDWDDE 608
+ D
Sbjct: 173 SEAPYYPDDLQSY 185
>d1rxta2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Human
(Homo sapiens) [TaxId: 9606]}
Length = 201
Score = 27.0 bits (60), Expect = 5.2
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 8/45 (17%)
Query: 384 DEDEYHRWFQSSPNVIKTHVTNN--------ISLGILPFPILSQD 420
++E WF N+I T V N +S LP I++
Sbjct: 72 SQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHP 116
>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin
hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii
[TaxId: 2190]}
Length = 242
Score = 26.5 bits (58), Expect = 8.4
Identities = 11/61 (18%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Query: 504 VGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTE 563
G Q + ++ A I V TIP + + + I H E
Sbjct: 151 KGNKQPDIIKK---FADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGCVPE 207
Query: 564 T 564
Sbjct: 208 M 208
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.140 0.451
Gapped
Lambda K H
0.267 0.0464 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,525,395
Number of extensions: 125503
Number of successful extensions: 462
Number of sequences better than 10.0: 1
Number of HSP's gapped: 398
Number of HSP's successfully gapped: 76
Length of query: 613
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 522
Effective length of database: 1,158,166
Effective search space: 604562652
Effective search space used: 604562652
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.0 bits)