BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4303
         (420 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|270006613|gb|EFA03061.1| hypothetical protein TcasGA2_TC010917 [Tribolium castaneum]
          Length = 316

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 99/137 (72%), Positives = 120/137 (87%), Gaps = 1/137 (0%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQNVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SKAK YLP +KQFL+T+NVPC RRC+Q++Y E+ ++IIE++  + GWVDTHHYD+     
Sbjct: 61  SKAKPYLPKDKQFLVTRNVPCTRRCEQMEYSEDLERIIESDDADNGWVDTHHYDQDQTTA 120

Query: 374 IAIEDKISEISLDASTG 390
           + +E+KISE++L  S G
Sbjct: 121 V-VEEKISEMTLSNSKG 136



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 73/89 (82%), Positives = 83/89 (93%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLTV+++Y+DVS+DYA KTVTME+HPHL  P MAS+HPCRHAEVMK IIETV EGGGELG
Sbjct: 228 PLTVEELYQDVSKDYAMKTVTMETHPHLSVPKMASVHPCRHAEVMKSIIETVTEGGGELG 287

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VHMYLIIFLKF+QSVIPTIEYD+TQNFT+
Sbjct: 288 VHMYLIIFLKFMQSVIPTIEYDYTQNFTM 316



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 5/71 (7%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME FEESG LD+   +    P       +   +  E G+I+ TRTYDLHITYDKYYQTPR
Sbjct: 162 MEAFEESGMLDDAQATTVIQPK-----VTAKKELDEDGEIIHTRTYDLHITYDKYYQTPR 216

Query: 229 LWLYGYNERFK 239
           LWL GYNE  K
Sbjct: 217 LWLTGYNEHHK 227



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+++Y+DVS+DYA KTVTME+HPHL  P MAS+HPCR
Sbjct: 229 LTVEELYQDVSKDYAMKTVTMETHPHLSVPKMASVHPCR 267


>gi|242021253|ref|XP_002431060.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212516289|gb|EEB18322.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 338

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 96/136 (70%), Positives = 121/136 (88%), Gaps = 5/136 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTALGVAE+LTP+LKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWASGD+
Sbjct: 1   MQSVLNTVKGTALGVAEFLTPILKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWASGDD 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K+K YLP NKQFLIT+NVPC RRCKQ++YCE+ +KIIE++  + GWVDTHHYD +    
Sbjct: 61  TKSKPYLPKNKQFLITRNVPCSRRCKQMEYCEDNEKIIESDDADNGWVDTHHYDTS---- 116

Query: 374 IAIEDKISEISLDAST 389
             I++K+SE+++++ T
Sbjct: 117 -VIDEKVSEMNIESQT 131



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 78/93 (83%), Positives = 90/93 (96%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTVDQMYEDVSQD+AKKTVTME+HPHLPGPPMAS+HPCRHAEVMKKII++V+EGG
Sbjct: 244 ENRKPLTVDQMYEDVSQDHAKKTVTMETHPHLPGPPMASVHPCRHAEVMKKIIQSVVEGG 303

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            ELGVHMYLIIF+KFVQ+VIPTIEYD+TQNF +
Sbjct: 304 SELGVHMYLIIFIKFVQAVIPTIEYDYTQNFNL 336



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 38/39 (97%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TVDQMYEDVSQD+AKKTVTME+HPHLPGPPMAS+HPCR
Sbjct: 249 LTVDQMYEDVSQDHAKKTVTMETHPHLPGPPMASVHPCR 287



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 47/69 (68%), Gaps = 7/69 (10%)

Query: 172 FEESGF-LDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLW 230
           FE+ GF +D+ D          Q+    + +S E GDI++TRTYDLHITYDKYYQTPRLW
Sbjct: 185 FEKEGFPMDDDDEVYV------QTAVVASPNSTESGDILKTRTYDLHITYDKYYQTPRLW 238

Query: 231 LYGYNERFK 239
           L+GY+E  K
Sbjct: 239 LFGYDENRK 247


>gi|340708493|ref|XP_003392860.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Bombus
           terrestris]
          Length = 323

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/135 (73%), Positives = 117/135 (86%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            + KSYLP  KQFL+T+NVPC RRCKQI+Y +E++ IIE +  E GWVDTHHYD + G  
Sbjct: 61  DRVKSYLPKTKQFLLTRNVPCTRRCKQIEYSKEQECIIEEDDPEGGWVDTHHYDSSLG-- 118

Query: 374 IAIEDKISEISLDAS 388
             IE++++E++LD +
Sbjct: 119 -GIEERVTEMTLDET 132



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 89/94 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCRHAEVMKKIIETV+EGG
Sbjct: 227 ENRKPLTVEEMYEDVSQDHAKKTVTMEVHPHIPGPLMASVHPCRHAEVMKKIIETVMEGG 286

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
            ELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 287 RELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 320



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 3/71 (4%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME FE SG LDEQD   A I    + P++   +S   G+I+ TRTYDL+ITYDKYYQTPR
Sbjct: 163 MEAFEVSGMLDEQDKYAAKI---TKKPANEKWESFSEGEIIHTRTYDLYITYDKYYQTPR 219

Query: 229 LWLYGYNERFK 239
           LWL GY+E  K
Sbjct: 220 LWLSGYDENRK 230



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCR
Sbjct: 232 LTVEEMYEDVSQDHAKKTVTMEVHPHIPGPLMASVHPCR 270


>gi|350413257|ref|XP_003489937.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Bombus
           impatiens]
          Length = 323

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/135 (73%), Positives = 117/135 (86%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            + KSYLP  KQFL+T+NVPC RRCKQI+Y +E++ IIE +  E GWVDTHHYD + G  
Sbjct: 61  DRIKSYLPKTKQFLLTRNVPCTRRCKQIEYSKEQECIIEEDDPEGGWVDTHHYDSSLG-- 118

Query: 374 IAIEDKISEISLDAS 388
             IE++++E++LD +
Sbjct: 119 -GIEERVTEMTLDET 132



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 89/94 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCRHAEVMKKIIETV+EGG
Sbjct: 227 ENRKPLTVEEMYEDVSQDHAKKTVTMEVHPHIPGPLMASVHPCRHAEVMKKIIETVMEGG 286

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
            ELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 287 RELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 320



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 3/71 (4%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME FE SG LDEQD   A I    + P++   +S   G+I+ TRTYDL+ITYDKYYQTPR
Sbjct: 163 MEAFEVSGMLDEQDKYAAKI---TKKPANEKWESFSEGEIIHTRTYDLYITYDKYYQTPR 219

Query: 229 LWLYGYNERFK 239
           LWL GY+E  K
Sbjct: 220 LWLSGYDENRK 230



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCR
Sbjct: 232 LTVEEMYEDVSQDHAKKTVTMEVHPHIPGPLMASVHPCR 270


>gi|189236943|ref|XP_967286.2| PREDICTED: similar to Aut1 CG6877-PA [Tribolium castaneum]
          Length = 318

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 98/135 (72%), Positives = 119/135 (88%), Gaps = 1/135 (0%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQNVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SKAK YLP +KQFL+T+NVPC RRC+Q++Y E+ ++IIE++  + GWVDTHHYD+     
Sbjct: 61  SKAKPYLPKDKQFLVTRNVPCTRRCEQMEYSEDLERIIESDDADNGWVDTHHYDQDQTTA 120

Query: 374 IAIEDKISEISLDAS 388
           + +E+KISE++L  S
Sbjct: 121 V-VEEKISEMTLSNS 134



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 73/89 (82%), Positives = 83/89 (93%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLTV+++Y+DVS+DYA KTVTME+HPHL  P MAS+HPCRHAEVMK IIETV EGGGELG
Sbjct: 230 PLTVEELYQDVSKDYAMKTVTMETHPHLSVPKMASVHPCRHAEVMKSIIETVTEGGGELG 289

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VHMYLIIFLKF+QSVIPTIEYD+TQNFT+
Sbjct: 290 VHMYLIIFLKFMQSVIPTIEYDYTQNFTM 318



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 5/71 (7%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME FEESG LD+   +    P       +   +  E G+I+ TRTYDLHITYDKYYQTPR
Sbjct: 164 MEAFEESGMLDDAQATTVIQPK-----VTAKKELDEDGEIIHTRTYDLHITYDKYYQTPR 218

Query: 229 LWLYGYNERFK 239
           LWL GYNE  K
Sbjct: 219 LWLTGYNEHHK 229



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 34/39 (87%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+++Y+DVS+DYA KTVTME+HPHL  P MAS+HPCR
Sbjct: 231 LTVEELYQDVSKDYAMKTVTMETHPHLSVPKMASVHPCR 269


>gi|215820604|ref|NP_001135961.1| autophagy related protein Atg3-like protein [Bombyx mori]
 gi|213390044|gb|ACJ46061.1| autophagy related protein Atg3-like protein [Bombyx mori]
          Length = 323

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 119/136 (87%), Gaps = 3/136 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALGVA YLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA G+E
Sbjct: 1   MQSVINTVKGTALGVAGYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
           +K + YLP +KQFLIT+NVPC RRCKQI+YCE+K+K+IE+E D + GWVDTHHYD     
Sbjct: 61  AKIRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDENDADGGWVDTHHYDNAGSP 120

Query: 373 DIAIEDKISEISLDAS 388
             A+E+K+ E++L+A+
Sbjct: 121 --ALEEKVCEMTLEAA 134



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/94 (78%), Positives = 87/94 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R+ LTV+QMYEDVSQD+AKKTVTMESHPHL GP MAS+HPCRHA+VMKKIIETV E G
Sbjct: 230 ENRSLLTVEQMYEDVSQDHAKKTVTMESHPHLSGPSMASVHPCRHADVMKKIIETVTESG 289

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           GE+GVH  LI+FLKFVQ+VIPTIEYDFTQNF+++
Sbjct: 290 GEMGVHSCLIVFLKFVQTVIPTIEYDFTQNFSIN 323



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 46/69 (66%), Gaps = 1/69 (1%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQTP 227
           ME F+ESG LDE DPS       +    +     Q  GD IVRTRTYDLHITYDKYYQTP
Sbjct: 162 MEQFQESGLLDEVDPSTDLAQRTELKLKADKKQKQGEGDEIVRTRTYDLHITYDKYYQTP 221

Query: 228 RLWLYGYNE 236
           RLWL GY+E
Sbjct: 222 RLWLIGYDE 230



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)

Query: 91  IEYDFTQNF-TVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           I YD  ++  TV+QMYEDVSQD+AKKTVTMESHPHL GP MAS+HPCR
Sbjct: 226 IGYDENRSLLTVEQMYEDVSQDHAKKTVTMESHPHLSGPSMASVHPCR 273


>gi|380023378|ref|XP_003695500.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Apis
           florea]
          Length = 327

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 98/135 (72%), Positives = 116/135 (85%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            + KSYLP  KQFL+T+NVPC RRCKQI+Y +E++ IIE +  E GWVDTHHYD +    
Sbjct: 61  DRVKSYLPKKKQFLLTRNVPCTRRCKQIEYSKEQECIIEADDPEGGWVDTHHYDTSLS-- 118

Query: 374 IAIEDKISEISLDAS 388
             IE++++E++LD +
Sbjct: 119 -GIEERVTEMTLDET 132



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 89/94 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCRHAEVMKKIIETV+EGG
Sbjct: 231 ENRKPLTVEEMYEDVSQDHAKKTVTMEIHPHIPGPLMASVHPCRHAEVMKKIIETVMEGG 290

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
            ELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 291 RELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 324



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 3/74 (4%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQ 225
           A DME FE SG LDE+D   A I    + P     +S   G+I+ TRTYDL+ITYDKYYQ
Sbjct: 164 AADMEAFEVSGMLDEEDKYAAKI---TKKPIKDKWESFSEGEIIHTRTYDLYITYDKYYQ 220

Query: 226 TPRLWLYGYNERFK 239
           TPRLWL GY+E  K
Sbjct: 221 TPRLWLSGYDENRK 234



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCR
Sbjct: 236 LTVEEMYEDVSQDHAKKTVTMEIHPHIPGPLMASVHPCR 274


>gi|383861904|ref|XP_003706424.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Megachile
           rotundata]
          Length = 317

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 97/135 (71%), Positives = 117/135 (86%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           ++ KSYLP NKQFL+ +NVPC RRCKQI+Y ++++ IIE +  E GWVDTHHYD +    
Sbjct: 61  ARIKSYLPKNKQFLVIRNVPCSRRCKQIEYSKDQECIIEADDPEGGWVDTHHYDTSLS-- 118

Query: 374 IAIEDKISEISLDAS 388
             IE++++E++LD +
Sbjct: 119 -GIEERVTEMTLDET 132



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/93 (84%), Positives = 88/93 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV +MYEDVSQD+AKKTVTME HPH+PGPPMAS+HPCRHAEVMKKIIETV+EGG
Sbjct: 221 ENRKPLTVVEMYEDVSQDHAKKTVTMEIHPHIPGPPMASVHPCRHAEVMKKIIETVMEGG 280

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            ELGVHMYLIIFLKFVQSVIPTIEYD+TQNF +
Sbjct: 281 RELGVHMYLIIFLKFVQSVIPTIEYDYTQNFML 313



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 3/71 (4%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME FE SG LDEQD   A      + P     ++   G+I+ TRTYDL+ITYDKYYQTPR
Sbjct: 157 MEAFEVSGMLDEQDKYTAET---TKKPVKEKCETFSEGEIIHTRTYDLYITYDKYYQTPR 213

Query: 229 LWLYGYNERFK 239
           LWL GY+E  K
Sbjct: 214 LWLSGYDENRK 224



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV +MYEDVSQD+AKKTVTME HPH+PGPPMAS+HPCR
Sbjct: 226 LTVVEMYEDVSQDHAKKTVTMEIHPHIPGPPMASVHPCR 264


>gi|66564768|ref|XP_624693.1| PREDICTED: autophagy 1 [Apis mellifera]
          Length = 327

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 98/135 (72%), Positives = 116/135 (85%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            + KSYLP  KQFL+T+NVPC RRCKQI+Y +E++ IIE +  E GWVDTHHYD +    
Sbjct: 61  DRVKSYLPKKKQFLLTRNVPCTRRCKQIEYSKEQECIIEADDPEGGWVDTHHYDMSLS-- 118

Query: 374 IAIEDKISEISLDAS 388
             IE++++E++LD +
Sbjct: 119 -GIEERVTEMTLDET 132



 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 89/94 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCRHAEVMKKIIETV+EGG
Sbjct: 231 ENRKPLTVEEMYEDVSQDHAKKTVTMEIHPHIPGPLMASVHPCRHAEVMKKIIETVMEGG 290

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
            ELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 291 RELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 324



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 3/71 (4%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME FE SG LDE+D   A I    + P     +S   G+I+ TRTYDL+ITYDKYYQTPR
Sbjct: 167 MEAFEVSGMLDEEDKYAAKI---TKKPIKDKWESFSEGEIIHTRTYDLYITYDKYYQTPR 223

Query: 229 LWLYGYNERFK 239
           LWL GY+E  K
Sbjct: 224 LWLSGYDENRK 234



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV++MYEDVSQD+AKKTVTME HPH+PGP MAS+HPCR
Sbjct: 236 LTVEEMYEDVSQDHAKKTVTMEIHPHIPGPLMASVHPCR 274


>gi|332375098|gb|AEE62690.1| unknown [Dendroctonus ponderosae]
          Length = 314

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/135 (72%), Positives = 116/135 (85%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VINSVKGTAL V EYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA GDE
Sbjct: 1   MQNVINSVKGTALAVGEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAVGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SKAK YLP  KQFLITKNVPC RRC+Q++Y ++ ++IIE++  + GWVDTHHYD+     
Sbjct: 61  SKAKPYLPKRKQFLITKNVPCSRRCEQMEYSDDLERIIESDDADNGWVDTHHYDKDNA-- 118

Query: 374 IAIEDKISEISLDAS 388
            +IEDKISE++L+ +
Sbjct: 119 -SIEDKISEMTLEKA 132



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/89 (77%), Positives = 80/89 (89%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL+  + ++DV++DYA KTVT+ESHPHL GP MAS+HPCRHAEVMK IIETV EGGGELG
Sbjct: 226 PLSAQEFFQDVNKDYAMKTVTLESHPHLSGPKMASVHPCRHAEVMKSIIETVTEGGGELG 285

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VHMYLIIFLKF+QSVIPTIEYD+TQNF +
Sbjct: 286 VHMYLIIFLKFMQSVIPTIEYDYTQNFKM 314



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 7/67 (10%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDS-QECGDIVRTRTYDLHITYDKYYQTPRLW 230
           FEESG L  +D  +A +      P++ AG S  + G+IVRTRTYDLHITYDKYYQTPRLW
Sbjct: 163 FEESGML--EDDQVAKVV----KPTATAGKSDADEGEIVRTRTYDLHITYDKYYQTPRLW 216

Query: 231 LYGYNER 237
           L GYNE+
Sbjct: 217 LTGYNEK 223



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 32/39 (82%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +  + ++DV++DYA KTVT+ESHPHL GP MAS+HPCR
Sbjct: 227 LSAQEFFQDVNKDYAMKTVTLESHPHLSGPKMASVHPCR 265


>gi|322800416|gb|EFZ21420.1| hypothetical protein SINV_08301 [Solenopsis invicta]
          Length = 315

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/137 (71%), Positives = 115/137 (83%), Gaps = 4/137 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            +AKSYLP  KQFL+T+NVPC RRCKQ++Y  E++ IIE +  E GWVDTHHY    G D
Sbjct: 61  DRAKSYLPKGKQFLLTRNVPCTRRCKQMEYSNEQECIIEADDPEGGWVDTHHYASVAGLD 120

Query: 374 IAIEDKISEISLDASTG 390
               ++++E++L+ S G
Sbjct: 121 ----ERVTEMALEESLG 133



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 91/94 (96%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL V++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCRHAEVMKKI+ETV+EGG
Sbjct: 219 ENRKPLNVEEMYEDVSQDHAKKTVTMETHPHIPGPPMASVHPCRHAEVMKKIMETVMEGG 278

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           GELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 279 GELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 312



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 47/68 (69%), Gaps = 2/68 (2%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           FE SG LDEQD   A    +K S      DS   G+I+RTRTYDL+ITYDKYYQTPRLWL
Sbjct: 157 FEISGMLDEQDKHTATENTKKTSHEKR--DSFTEGEIIRTRTYDLYITYDKYYQTPRLWL 214

Query: 232 YGYNERFK 239
           +GYNE  K
Sbjct: 215 FGYNENRK 222



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
             V++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCR
Sbjct: 224 LNVEEMYEDVSQDHAKKTVTMETHPHIPGPPMASVHPCR 262


>gi|406042042|gb|AFS31123.1| autophagy related protein Atg3-like protein [Spodoptera litura]
          Length = 325

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 119/136 (87%), Gaps = 3/136 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALGVA YLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA G+E
Sbjct: 1   MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
           +K + YLP +KQFLIT+NVPC RRCKQI+YCE+K+K+IE+E D + GWVDTHHYD T   
Sbjct: 61  AKLRPYLPADKQFLITRNVPCYRRCKQIEYCEDKEKVIEDEHDTDGGWVDTHHYDNTGSP 120

Query: 373 DIAIEDKISEISLDAS 388
              +E+K+ E++L+A+
Sbjct: 121 --TVEEKVCEMTLEAA 134



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 75/92 (81%), Positives = 84/92 (91%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R  L+V+QMYEDVSQD+AKKTVTMESHPHL GP MAS+HPCRHAEVMKKIIETV E GGE
Sbjct: 234 RTLLSVEQMYEDVSQDHAKKTVTMESHPHLSGPSMASVHPCRHAEVMKKIIETVTESGGE 293

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           +GVH YLI+FLKFVQ+VIPTIEYDFTQNF ++
Sbjct: 294 MGVHSYLIVFLKFVQTVIPTIEYDFTQNFAIN 325



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 2/69 (2%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQTP 227
           ME F+ESG LDE DPS  ++ P K+  + P    +  GD IVRTRTYDLHITYDKYYQTP
Sbjct: 165 MEQFQESGLLDEVDPS-TDLAPRKEPKTMPEKKPKSDGDEIVRTRTYDLHITYDKYYQTP 223

Query: 228 RLWLYGYNE 236
           RLWL GY+E
Sbjct: 224 RLWLIGYDE 232



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +V+QMYEDVSQD+AKKTVTMESHPHL GP MAS+HPCR
Sbjct: 237 LSVEQMYEDVSQDHAKKTVTMESHPHLSGPSMASVHPCR 275


>gi|156548264|ref|XP_001601099.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Nasonia
           vitripennis]
          Length = 316

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 99/137 (72%), Positives = 118/137 (86%), Gaps = 5/137 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAG+HLVHHCPTWQWA GD 
Sbjct: 1   MQSVINSVKGTALSVAEYLTPVLKESKFRETGVLTPEEFVAAGEHLVHHCPTWQWAVGDV 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYD-ETTGK 372
            +AK YLP +KQFL+T+NVPC RRCKQI+YC+E+++IIE +  E GWVDTHHYD   TG 
Sbjct: 61  DRAKPYLPKDKQFLLTRNVPCTRRCKQIEYCDEQEQIIEADDPEGGWVDTHHYDVNLTG- 119

Query: 373 DIAIEDKISEISLDAST 389
              +E+K+SE++L+ +T
Sbjct: 120 ---VEEKVSEMTLEEAT 133



 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/93 (84%), Positives = 90/93 (96%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCRHAEVMKKIIETV+EGG
Sbjct: 220 ENRKPLTVEEMYEDVSQDHAKKTVTMETHPHMPGPPMASVHPCRHAEVMKKIIETVMEGG 279

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            ELGVHMYLIIFLKFVQSVIPTIEYD+TQN T+
Sbjct: 280 RELGVHMYLIIFLKFVQSVIPTIEYDYTQNVTL 312



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           FE SG LDEQD    +   +KQ+  +    S+  G+I+RTRTYDLHITYDKYYQTPRLWL
Sbjct: 159 FEVSGMLDEQDKYTTD-ASKKQAKENQESFSE--GEIIRTRTYDLHITYDKYYQTPRLWL 215

Query: 232 YGYNERFK 239
           +GY+E  K
Sbjct: 216 FGYDENRK 223



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 38/39 (97%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCR
Sbjct: 225 LTVEEMYEDVSQDHAKKTVTMETHPHMPGPPMASVHPCR 263


>gi|307213386|gb|EFN88822.1| Autophagy-related protein 3 [Harpegnathos saltator]
          Length = 313

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 96/135 (71%), Positives = 116/135 (85%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAIGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            +AKSYLP +KQFL+T+NVPC RRCKQI+Y  E++ IIE +  E GWVDTHHYD +    
Sbjct: 61  DRAKSYLPKDKQFLLTRNVPCSRRCKQIEYSNEQECIIEADDTEGGWVDTHHYDISLA-- 118

Query: 374 IAIEDKISEISLDAS 388
             ++++++E++L+ +
Sbjct: 119 -GLDERVTEMTLEET 132



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 90/94 (95%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL V++MYEDVSQD+AKKTVTME HPH+PGPPMAS+HPCRHAEVMKKIIETV+EGG
Sbjct: 217 ENRKPLNVEEMYEDVSQDHAKKTVTMEIHPHIPGPPMASVHPCRHAEVMKKIIETVMEGG 276

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           GELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 277 GELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 310



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 46/68 (67%), Gaps = 2/68 (2%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           FE SG LDEQD   A  P   +       DS   G+I+RTRTYDL+ITYDKYYQTPRLWL
Sbjct: 155 FEVSGMLDEQDKHTA--PENTKKTGQEKRDSFSEGEIIRTRTYDLYITYDKYYQTPRLWL 212

Query: 232 YGYNERFK 239
           +GYNE  K
Sbjct: 213 FGYNENRK 220



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
             V++MYEDVSQD+AKKTVTME HPH+PGPPMAS+HPCR
Sbjct: 222 LNVEEMYEDVSQDHAKKTVTMEIHPHIPGPPMASVHPCR 260


>gi|357607479|gb|EHJ65520.1| autophagy related protein Atg3-like protein [Danaus plexippus]
          Length = 321

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 118/136 (86%), Gaps = 3/136 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALGVA YLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA G+E
Sbjct: 1   MQSVINTVKGTALGVAGYLTPVLKESKFQETGVLTPEEFVAAGDHLVHHCPTWQWAKGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
           SK + YLP +KQFLIT+NVPC RRCKQI+YC+E +K IE+E DE+ GWVDTHHY   +  
Sbjct: 61  SKIRPYLPSDKQFLITRNVPCYRRCKQIEYCDEHEKTIEDENDEDGGWVDTHHY--ASPG 118

Query: 373 DIAIEDKISEISLDAS 388
             A+E+K+ E++L+A+
Sbjct: 119 FPAVEEKVCEMTLEAA 134



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 72/92 (78%), Positives = 83/92 (90%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R  L+V+ MYEDVSQD+AKKTVTME+HPHL GP MAS+HPCRHAEVMKKIIETV+E GG 
Sbjct: 230 RRLLSVEAMYEDVSQDHAKKTVTMETHPHLSGPSMASVHPCRHAEVMKKIIETVMESGGA 289

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           L VH YLI+FLKFVQ+VIPTIEYDFTQNF+++
Sbjct: 290 LAVHSYLIVFLKFVQTVIPTIEYDFTQNFSMN 321



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 3/68 (4%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME+F+ESG LDE DPS A    ++   +    D  E   IV+TRTYDLHITYDKYYQTPR
Sbjct: 164 MENFQESGLLDEVDPSTALTTRKEPRKTVKHTDGDE---IVKTRTYDLHITYDKYYQTPR 220

Query: 229 LWLYGYNE 236
           LWL GY+E
Sbjct: 221 LWLIGYDE 228



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 35/39 (89%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +V+ MYEDVSQD+AKKTVTME+HPHL GP MAS+HPCR
Sbjct: 233 LSVEAMYEDVSQDHAKKTVTMETHPHLSGPSMASVHPCR 271


>gi|332027554|gb|EGI67628.1| Autophagy-related protein 3 [Acromyrmex echinatior]
          Length = 316

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 94/137 (68%), Positives = 115/137 (83%), Gaps = 3/137 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            + KSYLP  KQFL+T+NVPC RRCKQ++Y  E++ IIE +  E GWVDTHHY  +    
Sbjct: 61  DRVKSYLPKGKQFLLTRNVPCTRRCKQMEYSNEQECIIEADDPEGGWVDTHHYATSIA-- 118

Query: 374 IAIEDKISEISLDASTG 390
             ++++++E++L+ + G
Sbjct: 119 -GLDERVTEMTLEETLG 134



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 92/94 (97%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL+V++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCRHAEVMKKI+ETV+EGG
Sbjct: 220 ENRKPLSVEEMYEDVSQDHAKKTVTMETHPHIPGPPMASVHPCRHAEVMKKIMETVMEGG 279

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           GELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 280 GELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 313



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 38/39 (97%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +V++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCR
Sbjct: 225 LSVEEMYEDVSQDHAKKTVTMETHPHIPGPPMASVHPCR 263



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           FE SG LDEQD        +K S      D    G+I+ TRTYDL+ITYDKYYQTPRLWL
Sbjct: 158 FEISGMLDEQDKHAVTESTKKNSHEKR--DLFTEGEIIHTRTYDLYITYDKYYQTPRLWL 215

Query: 232 YGYNERFK 239
           +GYNE  K
Sbjct: 216 FGYNENRK 223


>gi|307177668|gb|EFN66714.1| Autophagy-related protein 3 [Camponotus floridanus]
          Length = 316

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/135 (70%), Positives = 115/135 (85%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWATGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            +AKSYLP  KQFL+T+NVPC RRCKQ++Y  +++ IIE +  E GWVDTHHY  +    
Sbjct: 61  DRAKSYLPKGKQFLLTRNVPCTRRCKQMEYSNDQECIIEADDPEGGWVDTHHYATSLA-- 118

Query: 374 IAIEDKISEISLDAS 388
             +++K+SE++L+ +
Sbjct: 119 -GLDEKVSEMALEET 132



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/94 (82%), Positives = 92/94 (97%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL+V++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCRHAEVMKKI+ETV+EGG
Sbjct: 220 ENRKPLSVEEMYEDVSQDHAKKTVTMETHPHIPGPPMASVHPCRHAEVMKKIMETVMEGG 279

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           GELGVHMYLIIFLKFVQSVIPTIEYD+TQNF ++
Sbjct: 280 GELGVHMYLIIFLKFVQSVIPTIEYDYTQNFMLN 313



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 46/68 (67%), Gaps = 2/68 (2%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           FE SG LDEQD   A    +K        DS   G+I+RTRTYDL+ITYDKYYQTPRLWL
Sbjct: 158 FEISGMLDEQDKHTATESIKKSGQEKR--DSFTEGEIIRTRTYDLYITYDKYYQTPRLWL 215

Query: 232 YGYNERFK 239
           YGYNE  K
Sbjct: 216 YGYNENRK 223



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 42/48 (87%), Gaps = 3/48 (6%)

Query: 93  YDFTQN---FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Y + +N    +V++MYEDVSQD+AKKTVTME+HPH+PGPPMAS+HPCR
Sbjct: 216 YGYNENRKPLSVEEMYEDVSQDHAKKTVTMETHPHIPGPPMASVHPCR 263


>gi|158288042|ref|XP_309926.3| AGAP011582-PA [Anopheles gambiae str. PEST]
 gi|157019283|gb|EAA05703.3| AGAP011582-PA [Anopheles gambiae str. PEST]
          Length = 334

 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 93/135 (68%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+V+NSVKGTALGVAEYLTPVLKESKFRETGV+TPEEF+AAGDHL HHCPTW WA GDE
Sbjct: 1   MQNVLNSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFIAAGDHLTHHCPTWSWAVGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SK K YLP +KQFLIT+NVPC RRCKQI++  E+  + EN+ D  GWV+THHY+      
Sbjct: 61  SKIKPYLPKDKQFLITRNVPCRRRCKQIEFVGEENLVEENDPD-GGWVETHHYNPDEAGS 119

Query: 374 IAIEDKISEISLDAS 388
             +EDK+ E+ LD+S
Sbjct: 120 SGLEDKVCEMKLDSS 134



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 74/93 (79%), Positives = 88/93 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R  L+V+QMY+DVSQD+AKKTVTME+HPHLPGP MAS+HPC+HA++MKKII+TV EGG
Sbjct: 238 ENRKLLSVEQMYDDVSQDHAKKTVTMETHPHLPGPNMASVHPCKHADIMKKIIQTVEEGG 297

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 298 GELGVHMYLIIFLKFVQTVIPTIEYDFTQNFNI 330



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYY 224
           A+DM++FEESG L+  DPS A +P   + P      S+  GD +VRTRTYDLHITYDKYY
Sbjct: 167 AIDMDEFEESGLLEMVDPSNALLPAPNEKPKPTVAASETEGDSVVRTRTYDLHITYDKYY 226

Query: 225 QTPRLWLYGYNERFK 239
           QTPRLW+ GY+E  K
Sbjct: 227 QTPRLWVIGYDENRK 241



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 48/62 (77%), Gaps = 2/62 (3%)

Query: 78  IIFLKFVQS-VIPTIEYDFTQNF-TVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHP 135
           I + K+ Q+  +  I YD  +   +V+QMY+DVSQD+AKKTVTME+HPHLPGP MAS+HP
Sbjct: 220 ITYDKYYQTPRLWVIGYDENRKLLSVEQMYDDVSQDHAKKTVTMETHPHLPGPNMASVHP 279

Query: 136 CR 137
           C+
Sbjct: 280 CK 281


>gi|237874221|ref|NP_001153868.1| autophagy related protein Aut1-like [Acyrthosiphon pisum]
          Length = 339

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/135 (68%), Positives = 109/135 (80%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VINSVKGTALG A +LTPVLKESKF+ETGVVTP EFV AGDHLVH CPTW+WA GDE
Sbjct: 1   MQNVINSVKGTALGFAGFLTPVLKESKFKETGVVTPNEFVIAGDHLVHTCPTWEWACGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K KSYLP NKQ+LIT+NVPC RRCKQI+ CE ++ I+E+E   EGWV+THH+D      
Sbjct: 61  CKTKSYLPKNKQYLITRNVPCVRRCKQIENCEVQENIVESEDGNEGWVETHHFDSALS-- 118

Query: 374 IAIEDKISEISLDAS 388
             + +KISEISL+ +
Sbjct: 119 -PLSEKISEISLEGN 132



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/93 (74%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +S+ PL+V++MYEDVSQDYAKKTVTMESHPH+PGP MASIHPC+HA++MKK+I+ V +GG
Sbjct: 247 ESQVPLSVEEMYEDVSQDYAKKTVTMESHPHVPGPSMASIHPCKHADIMKKLIQMVTDGG 306

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            +L VHMYLIIFLKFVQSVIPTI+YD+TQN  +
Sbjct: 307 RDLEVHMYLIIFLKFVQSVIPTIDYDYTQNINL 339



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 5/71 (7%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQ 225
           A+DM+ F ESG L++   +I    PE   P   +  S +  +I++TRTYDLHITYDK+YQ
Sbjct: 182 AVDMDAFVESGLLEDDSVTIY---PEHTKPKKLSSSSVD--EILKTRTYDLHITYDKFYQ 236

Query: 226 TPRLWLYGYNE 236
           TPRLWLYGYNE
Sbjct: 237 TPRLWLYGYNE 247



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +V++MYEDVSQDYAKKTVTMESHPH+PGP MASIHPC+
Sbjct: 252 LSVEEMYEDVSQDYAKKTVTMESHPHVPGPSMASIHPCK 290


>gi|157112258|ref|XP_001657463.1| hypothetical protein AaeL_AAEL000955 [Aedes aegypti]
 gi|108883736|gb|EAT47961.1| AAEL000955-PA [Aedes aegypti]
          Length = 329

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/135 (66%), Positives = 111/135 (82%), Gaps = 1/135 (0%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VINSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHL HHCPTW WA GDE
Sbjct: 1   MQNVINSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLTHHCPTWSWAVGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           ++ K YLP +KQFLIT+NVPC RRCKQ++Y  E+  + E++QD  GWV+THH++      
Sbjct: 61  TRIKPYLPKDKQFLITRNVPCYRRCKQMEYVGEETLVEESDQD-GGWVETHHFNPDGASG 119

Query: 374 IAIEDKISEISLDAS 388
             +EDK+ E++L+ +
Sbjct: 120 SGLEDKVCEMTLEGA 134



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/93 (82%), Positives = 89/93 (95%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+QMYEDVSQD+AKKTVTME+HPHLPGP MAS+HPC+HA++MKKII+TV EGG
Sbjct: 234 ENRKPLTVEQMYEDVSQDHAKKTVTMETHPHLPGPNMASVHPCKHADIMKKIIQTVEEGG 293

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 294 GELGVHMYLIIFLKFVQTVIPTIEYDFTQNFNI 326



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 2/74 (2%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQ 225
           A+DM++FEESG LD+ DPS+A + P +  P  P+   Q+   +V TRTYDLHITYDKYYQ
Sbjct: 166 AIDMDEFEESGMLDQVDPSLATVVPTENVPKKPS--EQDGDSVVHTRTYDLHITYDKYYQ 223

Query: 226 TPRLWLYGYNERFK 239
           TPRLW+ GY+E  K
Sbjct: 224 TPRLWVVGYDENRK 237



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTME+HPHLPGP MAS+HPC+
Sbjct: 239 LTVEQMYEDVSQDHAKKTVTMETHPHLPGPNMASVHPCK 277


>gi|41053345|ref|NP_956316.1| ubiquitin-like-conjugating enzyme ATG3 [Danio rerio]
 gi|61211775|sp|Q6PFS7.1|ATG3_DANRE RecName: Full=Ubiquitin-like-conjugating enzyme ATG3; AltName:
           Full=Autophagy-related protein 3; Short=APG3-like
 gi|34785406|gb|AAH57434.1| APG3 autophagy 3-like [Danio rerio]
          Length = 317

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VINSVKGTALGVAE+LTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTW+WASG+E
Sbjct: 1   MQNVINSVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT H    TG  
Sbjct: 61  AKVKPYLPNDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTFHNSGVTG-- 118

Query: 374 IAIEDKISEISLD 386
             + + + EISLD
Sbjct: 119 --VTEAVREISLD 129



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTVDQMYED+SQD+ KKTVT+E+HP+LP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 227 RQPLTVDQMYEDISQDHVKKTVTIENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 286

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 287 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 317



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 2/68 (2%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME++EESG L+  D ++        S +      ++   I++TRTYDL+ITYDKYYQTPR
Sbjct: 160 MEEYEESGLLETDDATLDTSKMADLSKTKAEAGGEDA--ILQTRTYDLYITYDKYYQTPR 217

Query: 229 LWLYGYNE 236
           LWL+GY+E
Sbjct: 218 LWLFGYDE 225



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TVDQMYED+SQD+ KKTVT+E+HP+LP P M S+HPCR
Sbjct: 228 QPLTVDQMYEDISQDHVKKTVTIENHPNLPPPAMCSVHPCR 268


>gi|432950867|ref|XP_004084649.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like isoform 2
           [Oryzias latipes]
          Length = 324

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 115/143 (80%), Gaps = 4/143 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKGTALGVAE+LTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTW+WA+G+E
Sbjct: 1   MQNVINTVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWAAGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K +LPP+KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  AKVKPFLPPDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSGLLG-- 118

Query: 374 IAIEDKISEISLDASTGWVDTHH 396
             + D + EISLD +   + + H
Sbjct: 119 --VTDAVREISLDNNKNLLISVH 139



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 234 RQPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 293

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 294 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 324



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 235 QPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 275



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 5/69 (7%)

Query: 169 MEDFEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  + ++  +   E ++ + P  +      I++TRTYDL+ITYDKYYQTP
Sbjct: 168 MEEYEESGLLETDEATLDTHRVTESKAKAEPGSEDA----ILQTRTYDLYITYDKYYQTP 223

Query: 228 RLWLYGYNE 236
           RLWL+GY+E
Sbjct: 224 RLWLFGYDE 232


>gi|195378522|ref|XP_002048032.1| GJ11573 [Drosophila virilis]
 gi|194155190|gb|EDW70374.1| GJ11573 [Drosophila virilis]
          Length = 334

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 97/149 (65%), Positives = 119/149 (79%), Gaps = 5/149 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHY-DETTGK 372
           SK K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH   D+ T +
Sbjct: 61  SKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLNDDGTNQ 119

Query: 373 DIAIEDKISEISLDASTGWVDTHHYDETT 401
              I++KI E++LD S   + T   D+T+
Sbjct: 120 ---IDEKICELTLDESKDEMHTPDSDKTS 145



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 86/91 (94%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL V+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 243 RKPLNVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 302

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 303 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 333



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
             V+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 246 LNVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 284



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 10/84 (11%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECG----------DIVRTRTYD 215
           A+DM+ FEESG L+  DP++A    +  + + P+  +               ++ TRTYD
Sbjct: 161 AIDMDAFEESGMLELVDPAVATTTRKLDAETLPSNSAGAGAAAGETAGSGDSVLHTRTYD 220

Query: 216 LHITYDKYYQTPRLWLYGYNERFK 239
           LHITYDKYYQTPRLW+ GY+E+ K
Sbjct: 221 LHITYDKYYQTPRLWVVGYDEQRK 244


>gi|432950865|ref|XP_004084648.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like isoform 1
           [Oryzias latipes]
          Length = 314

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 111/133 (83%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKGTALGVAE+LTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTW+WA+G+E
Sbjct: 1   MQNVINTVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWAAGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K +LPP+KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  AKVKPFLPPDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSGLLG-- 118

Query: 374 IAIEDKISEISLD 386
             + D + EISLD
Sbjct: 119 --VTDAVREISLD 129



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 224 RQPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 283

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 284 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 225 QPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 5/69 (7%)

Query: 169 MEDFEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  + ++  +   E ++ + P  +      I++TRTYDL+ITYDKYYQTP
Sbjct: 158 MEEYEESGLLETDEATLDTHRVTESKAKAEPGSEDA----ILQTRTYDLYITYDKYYQTP 213

Query: 228 RLWLYGYNE 236
           RLWL+GY+E
Sbjct: 214 RLWLFGYDE 222


>gi|170030052|ref|XP_001842904.1| Aut1 [Culex quinquefasciatus]
 gi|167865910|gb|EDS29293.1| Aut1 [Culex quinquefasciatus]
          Length = 326

 Score =  194 bits (493), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 93/138 (67%), Positives = 112/138 (81%), Gaps = 6/138 (4%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+V+NSVKGTALGVAEYLTPVLKESKFRETGV+TPEEFVAAGDHL HHCPTW WA GDE
Sbjct: 1   MQNVLNSVKGTALGVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLTHHCPTWAWAIGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYD---ETT 370
            +AKSY+P +KQFLIT+NVPC RRCKQ++Y  E+  + E + D  GWV+THHY+   E +
Sbjct: 61  DRAKSYMPKDKQFLITRNVPCYRRCKQMEYVGEETLVEEGDAD-GGWVETHHYNPDGEAS 119

Query: 371 GKDIAIEDKISEISLDAS 388
           G    +E K+ E++LD S
Sbjct: 120 GS--GLEQKVCEMTLDGS 135



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/93 (81%), Positives = 90/93 (96%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLT+++MYEDVSQD+AKKTVTME+HPHLPGPPMAS+HPC+HA++MKKII+TV EGG
Sbjct: 231 ENRKPLTMEEMYEDVSQDHAKKTVTMENHPHLPGPPMASVHPCKHADIMKKIIQTVEEGG 290

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 291 GELGVHMYLIIFLKFVQTVIPTIEYDFTQNFNI 323



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 51/70 (72%), Gaps = 6/70 (8%)

Query: 171 DFEESGFLDEQDPSIANIP-PEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRL 229
           +FEESG L+E DPS A IP P K+  S+  GDS     ++ TRTYDLHITYDKYYQTPRL
Sbjct: 170 EFEESGMLEEYDPSRAEIPQPVKKKDSTADGDS-----VIHTRTYDLHITYDKYYQTPRL 224

Query: 230 WLYGYNERFK 239
           W+ GY+E  K
Sbjct: 225 WVVGYDENRK 234



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 2/62 (3%)

Query: 78  IIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHP 135
           I + K+ Q+  +  + YD  +   T+++MYEDVSQD+AKKTVTME+HPHLPGPPMAS+HP
Sbjct: 213 ITYDKYYQTPRLWVVGYDENRKPLTMEEMYEDVSQDHAKKTVTMENHPHLPGPPMASVHP 272

Query: 136 CR 137
           C+
Sbjct: 273 CK 274


>gi|226442850|ref|NP_001139965.1| Autophagy-related protein 3 [Salmo salar]
 gi|221220516|gb|ACM08919.1| Autophagy-related protein 3 [Salmo salar]
          Length = 317

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 107/133 (80%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+ INSVKGTALGVAE+ TPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQW SG+E
Sbjct: 1   MQNAINSVKGTALGVAEFFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWVSGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K YLP +KQFL+T+NVPC +RCKQ++YC+E + IIE +  + GWVDT+H     G  
Sbjct: 61  EKVKPYLPKDKQFLLTRNVPCYKRCKQMEYCDELEAIIEEDDGDGGWVDTYHNSGIGG-- 118

Query: 374 IAIEDKISEISLD 386
             + + + EISLD
Sbjct: 119 --VTEAVREISLD 129



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMK+IIETV EGG
Sbjct: 218 EGRQPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKRIIETVAEGG 277

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++F +
Sbjct: 278 GELGVHMYLLIFLKFVQAVIPTIEYDYTKHFIM 310



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 221 QPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 261



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           +EESG L E D +  +         S  G++    DI++TRTYDL+ITYDKYYQTPRLWL
Sbjct: 156 YEESGLL-ETDEATLDTSKMVDLSKSKTGEAVS-DDILQTRTYDLYITYDKYYQTPRLWL 213

Query: 232 YGYNE 236
           +GY+E
Sbjct: 214 FGYDE 218


>gi|221219582|gb|ACM08452.1| Autophagy-related protein 3 [Salmo salar]
          Length = 237

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/133 (65%), Positives = 107/133 (80%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+ INSVKGTALGVAE+ TPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTW+W SG+E
Sbjct: 1   MQNAINSVKGTALGVAEFFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWVSGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K YLP +KQFL+T+NVPC +RCKQ++YC+E + IIE +  + GWVDT+H     G  
Sbjct: 61  EKVKPYLPKDKQFLLTRNVPCYKRCKQMEYCDELEAIIEEDDGDGGWVDTYHNSGIGG-- 118

Query: 374 IAIEDKISEISLD 386
             + + + EISLD
Sbjct: 119 --VTEAVREISLD 129



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 6/67 (8%)

Query: 172 FEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRL 229
           +EESG L  DE     + +    +S +  AG      DI++TRTYDL+ITYDKYYQTPRL
Sbjct: 158 YEESGLLETDEATLDTSKMVDLSKSKTGEAGSD----DILQTRTYDLYITYDKYYQTPRL 213

Query: 230 WLYGYNE 236
           WL+GY+E
Sbjct: 214 WLFGYDE 220


>gi|195591346|ref|XP_002085403.1| GD14768 [Drosophila simulans]
 gi|194197412|gb|EDX10988.1| GD14768 [Drosophila simulans]
          Length = 330

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 3/133 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+NSVKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNSVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLD 386
             +EDKI E++++
Sbjct: 118 TQLEDKICELTME 130



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 239 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 298

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 299 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 329



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 242 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 280



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 7/75 (9%)

Query: 172 FEESGFLDEQDPSIANI--PPEKQSPSSP----AGDSQECGD-IVRTRTYDLHITYDKYY 224
           FEESG L+  DP++A     PE ++ +SP    +G ++  GD ++ TRTYDLHI+YDKYY
Sbjct: 166 FEESGMLELVDPAVATTIRKPEPEAKASPVAAASGVAEASGDSVLHTRTYDLHISYDKYY 225

Query: 225 QTPRLWLYGYNERFK 239
           QTPRLW+ GY+E+ K
Sbjct: 226 QTPRLWVVGYDEQRK 240


>gi|195129729|ref|XP_002009307.1| GI11317 [Drosophila mojavensis]
 gi|193920916|gb|EDW19783.1| GI11317 [Drosophila mojavensis]
          Length = 334

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 113/136 (83%), Gaps = 5/136 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTP+LKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPILKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHY-DETTGK 372
           SK K+YLP +KQFLIT+NV C RRCKQ++Y  E + ++E E  + GWV+TH   D+ T +
Sbjct: 61  SKTKTYLPKDKQFLITRNVACYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLNDDGTNQ 119

Query: 373 DIAIEDKISEISLDAS 388
              +++KI E++LD S
Sbjct: 120 ---LDEKICELTLDES 132



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 243 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 302

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 303 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 333



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 9/83 (10%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIPPEKQSPSSP--------AGDSQECGD-IVRTRTYDL 216
           A+DM+ FEESG L+  DP++A    ++ + ++P        A ++   GD ++RTRTYDL
Sbjct: 162 AIDMDTFEESGMLELVDPAVATTTRKQDTETNPSKSASVKNASETASSGDSVLRTRTYDL 221

Query: 217 HITYDKYYQTPRLWLYGYNERFK 239
           HITYDKYYQTPRLW+ GY+E+ K
Sbjct: 222 HITYDKYYQTPRLWVVGYDEQRK 244



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 5/93 (5%)

Query: 49  HPCRHAEVMKKIIETVLEGGGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQM 104
           +P + A V K   ET   G   L    Y   I + K+ Q+  +  + YD  +   TV+QM
Sbjct: 193 NPSKSASV-KNASETASSGDSVLRTRTYDLHITYDKYYQTPRLWVVGYDEQRKPLTVEQM 251

Query: 105 YEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           YEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 252 YEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 284


>gi|38047557|gb|AAR09681.1| similar to Drosophila melanogaster CG6877, partial [Drosophila
           yakuba]
          Length = 254

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 110/133 (82%), Gaps = 3/133 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLD 386
             +EDKI E++++
Sbjct: 118 TQLEDKICELTME 130



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 7/75 (9%)

Query: 172 FEESGFLDEQDPSIANI--PPEKQSPSSP----AGDSQECGD-IVRTRTYDLHITYDKYY 224
           FEESG L+  DP++A     PE ++ +SP    +GD++  GD ++ TRTYDLHI+YDKYY
Sbjct: 166 FEESGMLELVDPAVATTTRKPEAEAKASPVAAASGDAEASGDSVLHTRTYDLHISYDKYY 225

Query: 225 QTPRLWLYGYNERFK 239
           QTPRLW+ GY+E+ K
Sbjct: 226 QTPRLWVVGYDEQRK 240


>gi|346469615|gb|AEO34652.1| hypothetical protein [Amblyomma maculatum]
          Length = 325

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 112/136 (82%), Gaps = 3/136 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALG A+ LTP+LKESKF+ETGV+TPEEFV AGDHLVHHCPTWQW++G+ 
Sbjct: 1   MQSVINTVKGTALGFADKLTPILKESKFKETGVITPEEFVLAGDHLVHHCPTWQWSAGEG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
             AKSYLPP+KQFL+T+NVPC +RCK ++Y  E +K++E E DE+ GWVDTHHY +    
Sbjct: 61  LPAKSYLPPDKQFLVTRNVPCYKRCKHMEYSMEHEKVLEEEGDEDGGWVDTHHYADAASS 120

Query: 373 DIAIEDKISEISLDAS 388
            +A  D++ E++L+ S
Sbjct: 121 GLA--DQVQEMTLEPS 134



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 88/91 (96%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL+++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCRHAEVMKKII+TV EGGGE
Sbjct: 235 RQPLSMEAMYEDISQDHAKKTVTMEAHPHLPGPPMASVHPCRHAEVMKKIIQTVTEGGGE 294

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYLI+FLKFVQ+VIPTIEYD+TQNFT+
Sbjct: 295 LGVHMYLIVFLKFVQAVIPTIEYDYTQNFTM 325



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 38/41 (92%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  +++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCR
Sbjct: 236 QPLSMEAMYEDISQDHAKKTVTMEAHPHLPGPPMASVHPCR 276



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 3/69 (4%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQEC---GDIVRTRTYDLHITYDKYYQTPR 228
           F ESG LD  DP+      E    +S  GD +     G IV TRTYDL+ITYD YY+TPR
Sbjct: 166 FVESGLLDADDPATVINKTEPAGVASCVGDGEPGSLDGAIVSTRTYDLNITYDNYYRTPR 225

Query: 229 LWLYGYNER 237
           LWLYGY+E+
Sbjct: 226 LWLYGYDEK 234


>gi|318037522|ref|NP_001187315.1| autophagy-related protein 3 [Ictalurus punctatus]
 gi|308322695|gb|ADO28485.1| autophagy-related protein 3 [Ictalurus punctatus]
          Length = 313

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 110/133 (82%), Gaps = 5/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ V NSVKGTALGVAE+LTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTW+WASG+E
Sbjct: 1   MQDVFNSVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT+H +  TG  
Sbjct: 61  AKVKPYLPKDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYH-NSVTG-- 117

Query: 374 IAIEDKISEISLD 386
             + + + EISLD
Sbjct: 118 --VAETVREISLD 128



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 84/91 (92%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 223 RQPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 282

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+ ++FT+
Sbjct: 283 LGVHMYLLIFLKFVQAVIPTIEYDYARHFTM 313



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 224 QPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 264



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 6/70 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           M+++EESG L  DE     + +    +  +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 156 MKEYEESGLLETDEATLDTSKMADTAKWKAEAGGEDA----ILQTRTYDLYITYDKYYQT 211

Query: 227 PRLWLYGYNE 236
           PRLWL+GY+E
Sbjct: 212 PRLWLFGYDE 221


>gi|308321410|gb|ADO27856.1| autophagy-related protein 3 [Ictalurus furcatus]
          Length = 313

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 110/133 (82%), Gaps = 5/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ V NSVKGTALGVAE+LTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTW+WASG+E
Sbjct: 1   MQDVFNSVKGTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT+H +  TG  
Sbjct: 61  AKVKPYLPKDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYH-NSVTG-- 117

Query: 374 IAIEDKISEISLD 386
             + + + EISLD
Sbjct: 118 --VAETVREISLD 128



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 74/91 (81%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 223 RQPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 282

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 283 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 313



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 224 QPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 264



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 6/70 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           M+++EESG L  DE     + +    +  +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 156 MKEYEESGLLETDEATLDTSKMADTAKWKAEAGGEDA----ILQTRTYDLYITYDKYYQT 211

Query: 227 PRLWLYGYNE 236
           PRLWL+GY+E
Sbjct: 212 PRLWLFGYDE 221


>gi|195494512|ref|XP_002094869.1| Aut1 [Drosophila yakuba]
 gi|194180970|gb|EDW94581.1| Aut1 [Drosophila yakuba]
          Length = 330

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 110/133 (82%), Gaps = 3/133 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLD 386
             +EDKI E++++
Sbjct: 118 TQLEDKICELTME 130



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 239 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 298

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 299 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 329



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 7/75 (9%)

Query: 172 FEESGFLDEQDPSIANI--PPEKQSPSSP----AGDSQECGD-IVRTRTYDLHITYDKYY 224
           FEESG L+  DP++A     PE ++ +SP    +GD++  GD ++ TRTYDLHI+YDKYY
Sbjct: 166 FEESGMLELVDPAVATTTRKPEAEAKASPVTAASGDAEASGDSVLHTRTYDLHISYDKYY 225

Query: 225 QTPRLWLYGYNERFK 239
           QTPRLW+ GY+E+ K
Sbjct: 226 QTPRLWVVGYDEQRK 240



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 242 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 280


>gi|21357935|ref|NP_649059.1| Aut1 [Drosophila melanogaster]
 gi|7293868|gb|AAF49233.1| Aut1 [Drosophila melanogaster]
 gi|21428984|gb|AAM50211.1| GH28859p [Drosophila melanogaster]
 gi|220944316|gb|ACL84701.1| Aut1-PA [synthetic construct]
 gi|220954176|gb|ACL89631.1| Aut1-PA [synthetic construct]
          Length = 330

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 110/133 (82%), Gaps = 3/133 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLD 386
             +EDKI E++++
Sbjct: 118 TQLEDKICELTME 130



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 239 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 298

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 299 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 329



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 7/75 (9%)

Query: 172 FEESGFLDEQDPSIANI--PPEKQSPSSP----AGDSQECGD-IVRTRTYDLHITYDKYY 224
           FEESG L+  DP++A     PE ++ +SP    +GD++  GD ++ TRTYDLHI+YDKYY
Sbjct: 166 FEESGMLELVDPAVATTTRKPEPEAKASPVAAASGDAEASGDSVLHTRTYDLHISYDKYY 225

Query: 225 QTPRLWLYGYNERFK 239
           QTPRLW+ GY+E+ K
Sbjct: 226 QTPRLWVVGYDEQRK 240



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 242 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 280


>gi|195352226|ref|XP_002042615.1| GM14991 [Drosophila sechellia]
 gi|194124499|gb|EDW46542.1| GM14991 [Drosophila sechellia]
          Length = 330

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 110/133 (82%), Gaps = 3/133 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLD 386
             +EDKI E++++
Sbjct: 118 TQLEDKICELTME 130



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 239 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 298

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 299 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 329



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 242 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 280



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 7/75 (9%)

Query: 172 FEESGFLDEQDPSIANI--PPEKQSPSSP----AGDSQECGD-IVRTRTYDLHITYDKYY 224
           FEESG L+  DP++A     PE ++ +SP    +G ++  GD ++ TRTYDLHI+YDKYY
Sbjct: 166 FEESGMLELVDPAVATTIRKPEPEAKASPVAAASGVAEASGDSVLHTRTYDLHISYDKYY 225

Query: 225 QTPRLWLYGYNERFK 239
           QTPRLW+ GY+E+ K
Sbjct: 226 QTPRLWVVGYDEQRK 240


>gi|194751789|ref|XP_001958206.1| GF23640 [Drosophila ananassae]
 gi|190625488|gb|EDV41012.1| GF23640 [Drosophila ananassae]
          Length = 332

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 110/133 (82%), Gaps = 3/133 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLNDD--GT 117

Query: 374 IAIEDKISEISLD 386
             +EDKI E++++
Sbjct: 118 TQLEDKICELTME 130



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 241 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 300

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 301 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 331



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 8/76 (10%)

Query: 172 FEESGFLDEQDPSIANI-----PPEKQSPSSPA--GDSQECGD-IVRTRTYDLHITYDKY 223
           FEESG LD  DP++A       P  K SP + A  G+++  GD ++ TRTYDLHITYDKY
Sbjct: 167 FEESGMLDLVDPAVATTTRKAEPEAKVSPGAGASGGEAEASGDSVLHTRTYDLHITYDKY 226

Query: 224 YQTPRLWLYGYNERFK 239
           YQTPRLW+ GY+E+ K
Sbjct: 227 YQTPRLWVVGYDEQRK 242



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 244 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 282


>gi|221222234|gb|ACM09778.1| Autophagy-related protein 3 [Salmo salar]
          Length = 320

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 106/133 (79%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+ INSVKGTALGVAE  TPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQW SG+E
Sbjct: 1   MQNAINSVKGTALGVAESFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWVSGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K YLP +KQFL+T+NVPC +RCKQ++YC+E + IIE +  + GWVDT+H     G  
Sbjct: 61  EKVKPYLPKDKQFLLTRNVPCYKRCKQMEYCDELEAIIEEDDGDGGWVDTYHNSGIGG-- 118

Query: 374 IAIEDKISEISLD 386
             + + + EISLD
Sbjct: 119 --VTEAVREISLD 129



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/93 (75%), Positives = 83/93 (89%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPC HAEVMK+IIETV EGG
Sbjct: 221 EGRQPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCGHAEVMKRIIETVAEGG 280

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIP IEYD+T++F +
Sbjct: 281 GELGVHMYLLIFLKFVQAVIPPIEYDYTKHFIM 313



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 34/40 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPC 136
           Q  TVDQMYED+SQD+ KKTVT+E+HPHLP P M S+HPC
Sbjct: 224 QPLTVDQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPC 263



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           +EESG L E D +  +         S  G++    DI++TRTYDL+ITYDKYYQTPRLWL
Sbjct: 159 YEESGLL-ETDEATLDTSKMVDLSKSKTGEAVS-DDILQTRTYDLYITYDKYYQTPRLWL 216

Query: 232 YGYNE 236
           +GY+E
Sbjct: 217 FGYDE 221


>gi|194871256|ref|XP_001972810.1| GG13677 [Drosophila erecta]
 gi|190654593|gb|EDV51836.1| GG13677 [Drosophila erecta]
          Length = 330

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 111/135 (82%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLDAS 388
             +EDKI E++++ +
Sbjct: 118 TQLEDKICELTMEET 132



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 77/93 (82%), Positives = 88/93 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGG
Sbjct: 237 EQRKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGG 296

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           G+LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 297 GQLGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 329



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 242 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 280



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 17/80 (21%)

Query: 172 FEESGFLDEQDPSIANI--PPEKQSPSSPA----------GDSQECGDIVRTRTYDLHIT 219
           FEESG L+  DP++A     PE ++ +SP           GDS     ++ TRTYDLHI+
Sbjct: 166 FEESGMLELVDPAVATTTRKPEAEAKASPVAAASSDAEASGDS-----VLHTRTYDLHIS 220

Query: 220 YDKYYQTPRLWLYGYNERFK 239
           YDKYYQTPRLW+ GY+E+ K
Sbjct: 221 YDKYYQTPRLWVVGYDEQRK 240


>gi|395733306|ref|XP_002813334.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-like-conjugating enzyme
           ATG3, partial [Pongo abelii]
          Length = 443

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 253 RMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD 312
           RMQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+
Sbjct: 129 RMQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGE 188

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGK 372
           E K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG 
Sbjct: 189 ELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG- 247

Query: 373 DIAIEDKISEISLD 386
              I + + EI+L+
Sbjct: 248 ---ITEAVKEITLE 258



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 353 RQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 412

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 413 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 443



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 354 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 394



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 286 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 341

Query: 227 PRLWLYGYNER 237
           PRLWL GY+E+
Sbjct: 342 PRLWLXGYDEQ 352


>gi|195440414|ref|XP_002068037.1| GK12099 [Drosophila willistoni]
 gi|194164122|gb|EDW79023.1| GK12099 [Drosophila willistoni]
          Length = 311

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 90/135 (66%), Positives = 111/135 (82%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+NSVKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNSVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLDAS 388
             +++KI E++L+ S
Sbjct: 118 TQLDEKICELTLEES 132



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/61 (80%), Positives = 56/61 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGG
Sbjct: 251 EQRKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGG 310

Query: 69  G 69
            
Sbjct: 311 A 311



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 2/62 (3%)

Query: 78  IIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHP 135
           I + K+ Q+  +  + YD  +   TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HP
Sbjct: 233 ITYDKYYQTPRLWVVGYDEQRKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHP 292

Query: 136 CR 137
           CR
Sbjct: 293 CR 294



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 18/84 (21%)

Query: 172 FEESGFLDEQDPSIANIPPE----------------KQSPSSPAGDSQECGDIVRTRTYD 215
           FEESG LD  DP++A    +                 ++     G+  +   ++ TRTYD
Sbjct: 173 FEESGMLDLVDPAVATTTRKIDAHDSKSANNSNSNPNEATGGSVGNGSDS--VLHTRTYD 230

Query: 216 LHITYDKYYQTPRLWLYGYNERFK 239
           LHITYDKYYQTPRLW+ GY+E+ K
Sbjct: 231 LHITYDKYYQTPRLWVVGYDEQRK 254


>gi|348566925|ref|XP_003469252.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Cavia
           porcellus]
          Length = 317

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 109/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SK K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  SKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 86/96 (89%), Gaps = 3/96 (3%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHM---YLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHM   YL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYPYYLLIFLKFVQAVIPTIEYDYTRHFTM 317



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKTKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|427788217|gb|JAA59560.1| Hypothetical protein [Rhipicephalus pulchellus]
          Length = 328

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 111/134 (82%), Gaps = 3/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALG A+ LTP+LKESKF+ETGV+TPEEFV AGDHLVHHCPTWQW++G+ 
Sbjct: 1   MQSVINTVKGTALGFADKLTPILKESKFKETGVITPEEFVLAGDHLVHHCPTWQWSAGEG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
             AKSYLPP+KQFL+T+NVPC +RCK ++Y  E +K++E E DE+ GWVDTHHY +    
Sbjct: 61  LPAKSYLPPDKQFLVTRNVPCYKRCKHMEYSMEHEKVLEEEGDEDGGWVDTHHYADAASS 120

Query: 373 DIAIEDKISEISLD 386
            +A  +++ E++L+
Sbjct: 121 GLA--EQVQEMTLE 132



 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 75/93 (80%), Positives = 89/93 (95%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL+++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCRHAEVMKKII+TV EGG
Sbjct: 236 ENRQPLSMEAMYEDISQDHAKKTVTMETHPHLPGPPMASVHPCRHAEVMKKIIQTVTEGG 295

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLI+FLKFVQ+VIPTIEYD+TQNF +
Sbjct: 296 GELGVHMYLIVFLKFVQAVIPTIEYDYTQNFAM 328



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 38/41 (92%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  +++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCR
Sbjct: 239 QPLSMEAMYEDISQDHAKKTVTMETHPHLPGPPMASVHPCR 279



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD----IVRTRTYDLHITYDKYY 224
           M+ F ESG LD  D +      E    +  AG   E G     IV TRTYDL+ITYD YY
Sbjct: 165 MDAFVESGLLDADDTATVVKKAEATDKTLGAGGEAEPGSLDGAIVSTRTYDLNITYDNYY 224

Query: 225 QTPRLWLYGYNE 236
           +TPRLWLYGY+E
Sbjct: 225 RTPRLWLYGYDE 236


>gi|195022952|ref|XP_001985669.1| GH14373 [Drosophila grimshawi]
 gi|193899151|gb|EDV98017.1| GH14373 [Drosophila grimshawi]
          Length = 332

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 112/136 (82%), Gaps = 5/136 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKG AL VAEYLTP+LKESKFRETGV+TPE+FVAAGDHLVHHCPTWQWA+GDE
Sbjct: 1   MQSVLNTVKGKALNVAEYLTPILKESKFRETGVLTPEDFVAAGDHLVHHCPTWQWAAGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHY-DETTGK 372
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH   D+ T +
Sbjct: 61  NKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLNDDGTNQ 119

Query: 373 DIAIEDKISEISLDAS 388
              ++DKI E++LD S
Sbjct: 120 ---LDDKICELTLDES 132



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 86/91 (94%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL V+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 241 RKPLNVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 300

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 301 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 331



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 9/77 (11%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSP--------AGDSQECGD-IVRTRTYDLHITYDK 222
           FEESG LD  DP++A    ++++ + P        A ++   GD ++RTRTYDLHITYDK
Sbjct: 166 FEESGMLDLVDPAVATTTRKQEAETRPCNTTASVVASETASSGDSVLRTRTYDLHITYDK 225

Query: 223 YYQTPRLWLYGYNERFK 239
           YYQTPRLW++GY+E+ K
Sbjct: 226 YYQTPRLWVFGYDEQRK 242



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 36/39 (92%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
             V+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 244 LNVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 282


>gi|241570217|ref|XP_002402769.1| autophagocytosis-involved protein during starvation, putative
           [Ixodes scapularis]
 gi|215500113|gb|EEC09607.1| autophagocytosis-involved protein during starvation, putative
           [Ixodes scapularis]
          Length = 323

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 113/134 (84%), Gaps = 3/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQS+IN+VKGTALG A+ LTP+LKESKF+ETGV+TPEEFV AGDHLVHHCPTWQWA+G+ 
Sbjct: 1   MQSMINTVKGTALGFADRLTPILKESKFKETGVITPEEFVLAGDHLVHHCPTWQWATGEG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
             AKSYLPP+KQFL+T+NVPC +RCK ++Y  +++K++E E DE+ GWVDTHHY + T  
Sbjct: 61  LPAKSYLPPDKQFLVTRNVPCYKRCKHMEYSMDQEKVLEEEGDEDGGWVDTHHYSDGTTS 120

Query: 373 DIAIEDKISEISLD 386
            +A  +++ E++L+
Sbjct: 121 GLA--EQVQEMTLE 132



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 90/97 (92%), Gaps = 4/97 (4%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHP----CRHAEVMKKIIETV 64
           ++R PLT+++MYED+SQD+AKKTVTME+HPHLPGPPMAS+HP    CRHAEVMK+II+TV
Sbjct: 227 ENRQPLTIEEMYEDISQDHAKKTVTMEAHPHLPGPPMASVHPGTVLCRHAEVMKRIIQTV 286

Query: 65  LEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            EGGGELGVHMYLI+FLKFVQ+VIPTIEYD+TQNF +
Sbjct: 287 TEGGGELGVHMYLIVFLKFVQAVIPTIEYDYTQNFAM 323



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           F ESG LD  DP+     PE   P++    + + G IV TRTYDL+ITYD YY+TPRLW 
Sbjct: 165 FVESGLLDADDPATVTAKPE--VPAAEKCSAADEGGIVSTRTYDLNITYDNYYRTPRLWF 222

Query: 232 YGYNE 236
           YGY+E
Sbjct: 223 YGYDE 227



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/45 (71%), Positives = 39/45 (86%), Gaps = 4/45 (8%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHP----CR 137
           Q  T+++MYED+SQD+AKKTVTME+HPHLPGPPMAS+HP    CR
Sbjct: 230 QPLTIEEMYEDISQDHAKKTVTMEAHPHLPGPPMASVHPGTVLCR 274


>gi|427788195|gb|JAA59549.1| Hypothetical protein [Rhipicephalus pulchellus]
          Length = 328

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 111/134 (82%), Gaps = 3/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALG A+ LTP+LKESKF+ETGV+TPEEFV AGDHLVHHCPTWQW++G+ 
Sbjct: 1   MQSVINTVKGTALGFADKLTPILKESKFKETGVITPEEFVLAGDHLVHHCPTWQWSAGEG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
             AKSYLPP+KQFL+T+NVPC +RCK ++Y  E +K++E E DE+ GWVDTHHY +    
Sbjct: 61  LPAKSYLPPDKQFLVTRNVPCYKRCKHMEYSMEHEKVLEEEGDEDGGWVDTHHYADAASS 120

Query: 373 DIAIEDKISEISLD 386
            +A  +++ E++L+
Sbjct: 121 GLA--EQVQEMTLE 132



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/93 (80%), Positives = 89/93 (95%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL+++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCRHAEVMKKII+TV EGG
Sbjct: 236 ENRQPLSMEAMYEDISQDHAKKTVTMETHPHLPGPPMASVHPCRHAEVMKKIIQTVTEGG 295

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLI+FLKFVQ+VIPTIEYD+TQNF +
Sbjct: 296 GELGVHMYLIVFLKFVQAVIPTIEYDYTQNFAM 328



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 38/41 (92%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  +++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCR
Sbjct: 239 QPLSMEAMYEDISQDHAKKTVTMETHPHLPGPPMASVHPCR 279



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEK--QSPSSPAGDSQEC--GDIVRTRTYDLHITYDKYY 224
           M+ F ESG LD  D +      E   ++  +       C  G IV TRTYDL+ITYD YY
Sbjct: 165 MDAFVESGLLDADDTATVVKKAEATDKTLGAGGEGEAGCLDGAIVSTRTYDLNITYDNYY 224

Query: 225 QTPRLWLYGYNE 236
           +TPRLWLYGY+E
Sbjct: 225 RTPRLWLYGYDE 236


>gi|395518982|ref|XP_003763632.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Sarcophilus
           harrisii]
          Length = 313

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWASG+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             + + + EI+L++
Sbjct: 119 --VTEVVKEITLES 130



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 223 RQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 282

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 283 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 313



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 224 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 264



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 2/69 (2%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME++EESG L+  + ++      + + +     S++   I++TRTYDL+ITYDKYYQTPR
Sbjct: 156 MEEYEESGLLETDEATLDTRKIVEVNKAKNDAGSEDA--ILQTRTYDLYITYDKYYQTPR 213

Query: 229 LWLYGYNER 237
           LWL+GY+E+
Sbjct: 214 LWLFGYDEQ 222


>gi|327269006|ref|XP_003219286.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Anolis
           carolinensis]
          Length = 314

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 110/134 (82%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTW+WA+G+E
Sbjct: 1   MQSVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP +KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPADKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNAGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             + + I EI+L++
Sbjct: 119 --VTESIKEITLES 130



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL+VD MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 224 RQPLSVDHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 284 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 3/70 (4%)

Query: 169 MEDFEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  D ++      E     +  G  +E   I++TRTYDL+ITYDKYYQTP
Sbjct: 156 MEEYEESGLLETDDATLDTRKIVEAAKAKADVGGGEEV--ILQTRTYDLYITYDKYYQTP 213

Query: 228 RLWLYGYNER 237
           RLWL+GY+E+
Sbjct: 214 RLWLFGYDEQ 223



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  +VD MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLSVDHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265


>gi|125978913|ref|XP_001353489.1| GA19925 [Drosophila pseudoobscura pseudoobscura]
 gi|54642251|gb|EAL31000.1| GA19925 [Drosophila pseudoobscura pseudoobscura]
          Length = 328

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 110/133 (82%), Gaps = 3/133 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+NSVKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GD+
Sbjct: 1   MQSVLNSVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDD 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLD 386
             +E+KI E++++
Sbjct: 118 TQLEEKICELTME 130



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 237 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 296

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 297 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 327



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 5/73 (6%)

Query: 172 FEESGFLDEQDPSIAN----IPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQT 226
           FEESG LD  DP++A     +  E +S  + A  S+  GD ++ TRTYDLHITYDKYYQT
Sbjct: 166 FEESGMLDLVDPAVATTTRKLEAEPKSSPAAAATSEASGDSVLHTRTYDLHITYDKYYQT 225

Query: 227 PRLWLYGYNERFK 239
           PRLW+ GY+E+ K
Sbjct: 226 PRLWVVGYDEQRK 238



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 240 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 278


>gi|427788215|gb|JAA59559.1| Hypothetical protein [Rhipicephalus pulchellus]
          Length = 328

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 111/134 (82%), Gaps = 3/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALG A+ LTP+LKESKF+ETGV+TPEEFV AGDHLVHHCPTWQW++G+ 
Sbjct: 1   MQSVINTVKGTALGFADKLTPILKESKFKETGVITPEEFVLAGDHLVHHCPTWQWSAGEG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
             AKSYLPP+KQFL+T+NVPC +RCK ++Y  E +K++E E DE+ GWVDTHHY +    
Sbjct: 61  LPAKSYLPPDKQFLVTRNVPCYKRCKHMEYSMEHEKVLEEEGDEDGGWVDTHHYADAASS 120

Query: 373 DIAIEDKISEISLD 386
            +A  +++ E++L+
Sbjct: 121 GLA--EQVQEMTLE 132



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 75/93 (80%), Positives = 89/93 (95%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL+++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCRHAEVMKKII+TV EGG
Sbjct: 236 ENRQPLSMEAMYEDISQDHAKKTVTMETHPHLPGPPMASVHPCRHAEVMKKIIQTVTEGG 295

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLI+FLKFVQ+VIPTIEYD+TQNF +
Sbjct: 296 GELGVHMYLIVFLKFVQAVIPTIEYDYTQNFAM 328



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 38/41 (92%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  +++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCR
Sbjct: 239 QPLSMEAMYEDISQDHAKKTVTMETHPHLPGPPMASVHPCR 279



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 169 MEDFEESGFLDEQDPS--IANIPPEKQSPSSPAGDSQEC--GDIVRTRTYDLHITYDKYY 224
           M+ F ESG LD  D +  +       ++  +       C  G IV TRTYDL+ITYD YY
Sbjct: 165 MDAFVESGLLDADDTATVVKKAEATDKTLGAGGEGEAGCLDGAIVSTRTYDLNITYDNYY 224

Query: 225 QTPRLWLYGYNE 236
           +TPRLWLYGY+E
Sbjct: 225 RTPRLWLYGYDE 236


>gi|348534559|ref|XP_003454769.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Oreochromis
           niloticus]
          Length = 313

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/133 (65%), Positives = 110/133 (82%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKGTALGVAE  TPVLKES+F+ETGV+TPEEFVAAGDHLVHHCPTW+WA+G+E
Sbjct: 1   MQNVINTVKGTALGVAELFTPVLKESRFKETGVLTPEEFVAAGDHLVHHCPTWKWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  AKVKPYLPQDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYH---NTGV- 116

Query: 374 IAIEDKISEISLD 386
           + + D + EISLD
Sbjct: 117 LGVTDAVQEISLD 129



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 223 RQPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 282

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 283 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 313



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 224 QPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 264



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 5/69 (7%)

Query: 169 MEDFEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  + ++  +   E ++ + P  +      I++TRTYDL+ITYDKYYQTP
Sbjct: 157 MEEYEESGLLETDEATLDTSKIAETKTKAEPGSEDA----ILQTRTYDLYITYDKYYQTP 212

Query: 228 RLWLYGYNE 236
           RLWL+GY+E
Sbjct: 213 RLWLFGYDE 221


>gi|13385890|ref|NP_080678.1| ubiquitin-like-conjugating enzyme ATG3 [Mus musculus]
 gi|61211884|sp|Q9CPX6.1|ATG3_MOUSE RecName: Full=Ubiquitin-like-conjugating enzyme ATG3; AltName:
           Full=Autophagy-related protein 3; Short=APG3-like
 gi|12837702|dbj|BAB23918.1| unnamed protein product [Mus musculus]
 gi|12847514|dbj|BAB27600.1| unnamed protein product [Mus musculus]
 gi|14789861|gb|AAH10809.1| Autophagy-related 3 (yeast) [Mus musculus]
 gi|26347577|dbj|BAC37437.1| unnamed protein product [Mus musculus]
 gi|28460651|dbj|BAC57452.1| Apg3p [Mus musculus]
 gi|74181353|dbj|BAE29952.1| unnamed protein product [Mus musculus]
 gi|74192810|dbj|BAE34917.1| unnamed protein product [Mus musculus]
 gi|148665644|gb|EDK98060.1| autophagy-related 3 (yeast) [Mus musculus]
          Length = 314

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 110/134 (82%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP +KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTDKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKADAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|19705511|ref|NP_599221.1| ubiquitin-like-conjugating enzyme ATG3 [Rattus norvegicus]
 gi|9957034|gb|AAG09182.1|AF175224_1 preconditioning-inducible gene 1 protein [Rattus norvegicus]
          Length = 314

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPLMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 34/41 (82%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPLMCSVHPCR 265



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 6/68 (8%)

Query: 172 FEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRL 229
           +EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQTPRL
Sbjct: 160 YEESGLLETDEATLDTRRIVEACKAKADAGGEDA----ILQTRTYDLYITYDKYYQTPRL 215

Query: 230 WLYGYNER 237
           WL+GY+E+
Sbjct: 216 WLFGYDEQ 223


>gi|61211340|sp|Q6AZ50.1|ATG3_RAT RecName: Full=Ubiquitin-like-conjugating enzyme ATG3; AltName:
           Full=Autophagy-related protein 3; Short=APG3-like;
           AltName: Full=Preconditioning-inducible gene 1 protein
 gi|50925451|gb|AAH78743.1| ATG3 autophagy related 3 homolog (S. cerevisiae) [Rattus
           norvegicus]
 gi|149060431|gb|EDM11145.1| APG3 autophagy 3-like (S. cerevisiae), isoform CRA_a [Rattus
           norvegicus]
          Length = 314

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 6/68 (8%)

Query: 172 FEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRL 229
           +EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQTPRL
Sbjct: 160 YEESGLLETDEATLDTRRIVEACKAKADAGGEDA----ILQTRTYDLYITYDKYYQTPRL 215

Query: 230 WLYGYNER 237
           WL+GY+E+
Sbjct: 216 WLFGYDEQ 223


>gi|350591965|ref|XP_003132730.3| PREDICTED: autophagy-related 3 isoform 2 [Sus scrofa]
          Length = 314

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 109/137 (79%), Gaps = 4/137 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG-- 118

Query: 374 IAIEDKISEISLDASTG 390
             I + + EI+L++  G
Sbjct: 119 --ITEAVKEITLESKDG 133



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|417398822|gb|JAA46444.1| Putative ubiquitin-like-conjugating enzyme atg3 [Desmodus rotundus]
          Length = 314

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTP+LKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPILKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGVTG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 6/68 (8%)

Query: 172 FEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRL 229
           +EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQTPRL
Sbjct: 160 YEESGLLETDEATLDTRKIVEACKTKTDAGGEDV----ILQTRTYDLYITYDKYYQTPRL 215

Query: 230 WLYGYNER 237
           WL+GY+E+
Sbjct: 216 WLFGYDEQ 223


>gi|50729624|ref|XP_416588.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Gallus gallus]
          Length = 313

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWASG+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP +KQFL+TKNVPC +RCKQ++Y +E++ IIE +  + GWVDT H     G  
Sbjct: 61  LKVKAYLPTDKQFLVTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTFHNAGIVGAT 120

Query: 374 IAIEDKISEISLDA 387
            A++    EI+LD+
Sbjct: 121 EAVK----EITLDS 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 221 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 280

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 281 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 313



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 224 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 264



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 5/70 (7%)

Query: 169 MEDFEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  D ++      E ++     G+      I++TRTYDL+ITYDKYYQTP
Sbjct: 157 MEEYEESGLLETDDATLDTRQIVEVKAKVDVGGEDA----ILQTRTYDLYITYDKYYQTP 212

Query: 228 RLWLYGYNER 237
           RLWL+GY+E+
Sbjct: 213 RLWLFGYDEQ 222


>gi|402859019|ref|XP_003893971.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Papio anubis]
          Length = 314

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPAGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 2/69 (2%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME++EESG L+  + ++      +   +     S++   I++TRTYDL+ITYDKYYQTPR
Sbjct: 157 MEEYEESGLLETDEATLDTSKIVEACKAKTDAGSEDA--ILQTRTYDLYITYDKYYQTPR 214

Query: 229 LWLYGYNER 237
           LWL+GY+E+
Sbjct: 215 LWLFGYDEQ 223


>gi|302563453|ref|NP_001181205.1| autophagy-related protein 3 [Macaca mulatta]
 gi|355559327|gb|EHH16055.1| hypothetical protein EGK_11288 [Macaca mulatta]
 gi|355746407|gb|EHH51021.1| hypothetical protein EGM_10339 [Macaca fascicularis]
 gi|380815602|gb|AFE79675.1| ubiquitin-like-conjugating enzyme ATG3 [Macaca mulatta]
 gi|384948798|gb|AFI38004.1| ubiquitin-like-conjugating enzyme ATG3 [Macaca mulatta]
          Length = 314

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPAGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE     + I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTSKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|291400683|ref|XP_002716751.1| PREDICTED: Apg3p [Oryctolagus cuniculus]
          Length = 314

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       +    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKLVEACKAKADAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|195160890|ref|XP_002021305.1| GL24881 [Drosophila persimilis]
 gi|194118418|gb|EDW40461.1| GL24881 [Drosophila persimilis]
          Length = 328

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 111/135 (82%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAGDHLVHHCPTWQWA+GD+
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGDHLVHHCPTWQWAAGDD 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K YLP +KQFLIT+NVPC RRCKQ++Y  E + ++E E  + GWV+TH  ++     
Sbjct: 61  TKTKPYLPKDKQFLITRNVPCYRRCKQMEYVGE-ETLVEEESGDGGWVETHQLND--DGT 117

Query: 374 IAIEDKISEISLDAS 388
             +E+KI E++++ +
Sbjct: 118 TQLEEKICELTMEET 132



 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/91 (84%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGGG+
Sbjct: 237 RKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGGGQ 296

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 297 LGVHLYLIIFLKFVQTVIPTIEYDFTQNFNM 327



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 5/73 (6%)

Query: 172 FEESGFLDEQDPSIAN----IPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQT 226
           FEESG LD  DP++A     +  E +S  + A  S+  GD ++ TRTYDLHITYDKYYQT
Sbjct: 166 FEESGMLDLVDPAVATTTRKLEAEPKSSPAAAATSEASGDSVLHTRTYDLHITYDKYYQT 225

Query: 227 PRLWLYGYNERFK 239
           PRLW+ GY+E+ K
Sbjct: 226 PRLWVVGYDEQRK 238



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCR
Sbjct: 240 LTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCR 278


>gi|19526773|ref|NP_071933.2| ubiquitin-like-conjugating enzyme ATG3 [Homo sapiens]
 gi|114588462|ref|XP_001155234.1| PREDICTED: autophagy related 3 isoform 1 [Pan troglodytes]
 gi|332225389|ref|XP_003261862.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Nomascus
           leucogenys]
 gi|397509467|ref|XP_003825142.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Pan paniscus]
 gi|426341569|ref|XP_004036106.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Gorilla gorilla
           gorilla]
 gi|61212142|sp|Q9NT62.1|ATG3_HUMAN RecName: Full=Ubiquitin-like-conjugating enzyme ATG3; AltName:
           Full=Autophagy-related protein 3; Short=APG3-like;
           Short=hApg3; AltName: Full=Protein PC3-96
 gi|11493700|gb|AAG35611.1|AF202092_1 PC3-96 [Homo sapiens]
 gi|6808174|emb|CAB70781.1| hypothetical protein [Homo sapiens]
 gi|18999374|gb|AAH24221.1| ATG3 autophagy related 3 homolog (S. cerevisiae) [Homo sapiens]
 gi|20196206|dbj|BAB90843.1| Apg3p [Homo sapiens]
 gi|119600074|gb|EAW79668.1| ATG3 autophagy related 3 homolog (S. cerevisiae), isoform CRA_a
           [Homo sapiens]
 gi|123993497|gb|ABM84350.1| ATG3 autophagy related 3 homolog (S. cerevisiae) [synthetic
           construct]
 gi|124000529|gb|ABM87773.1| ATG3 autophagy related 3 homolog (S. cerevisiae) [synthetic
           construct]
 gi|410214774|gb|JAA04606.1| ATG3 autophagy related 3 homolog [Pan troglodytes]
 gi|410258718|gb|JAA17326.1| ATG3 autophagy related 3 homolog [Pan troglodytes]
 gi|410293600|gb|JAA25400.1| ATG3 autophagy related 3 homolog [Pan troglodytes]
 gi|410354977|gb|JAA44092.1| ATG3 autophagy related 3 homolog [Pan troglodytes]
          Length = 314

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|45708793|gb|AAH02830.1| ATG3 protein [Homo sapiens]
          Length = 317

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 75/96 (78%), Gaps = 2/96 (2%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVDQM 104
           GELGVHMY  ++++ V   + TI   F + F+V  M
Sbjct: 282 GELGVHMYPSLYVRLVAKWLLTI--FFFEKFSVTLM 315



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|403288656|ref|XP_003935511.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Saimiri
           boliviensis boliviensis]
          Length = 314

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|224044074|ref|XP_002193164.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Taeniopygia
           guttata]
          Length = 314

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWASG+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP +KQFL+TKNVPC +RCKQ++Y +E++ IIE +  + GWVDT H     G  
Sbjct: 61  LKVKAYLPTDKQFLVTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTFHNAGIVGAT 120

Query: 374 IAIEDKISEISLDA 387
            A++    EI+LD+
Sbjct: 121 EAVK----EITLDS 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 224 RQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 284 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 6/70 (8%)

Query: 169 MEDFEESGFLDEQDPSI--ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L+  D ++   +I    ++     G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDDATLDTRHIVEANKTKVDVGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNE 236
           PRLWL+GY+E
Sbjct: 213 PRLWLFGYDE 222


>gi|119600075|gb|EAW79669.1| ATG3 autophagy related 3 homolog (S. cerevisiae), isoform CRA_b
           [Homo sapiens]
          Length = 311

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 70/85 (82%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEY 93
           GELGVHMY  ++++ V   + TI +
Sbjct: 282 GELGVHMYPSLYVRLVAKWLLTIFF 306



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|119600077|gb|EAW79671.1| ATG3 autophagy related 3 homolog (S. cerevisiae), isoform CRA_d
           [Homo sapiens]
          Length = 324

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + EI+L+
Sbjct: 119 --ITEAVKEITLE 129



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/83 (68%), Positives = 69/83 (83%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 224 RQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283

Query: 71  LGVHMYLIIFLKFVQSVIPTIEY 93
           LGVHMY  ++++ V   + TI +
Sbjct: 284 LGVHMYPSLYVRLVAKWLLTIFF 306



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|326912932|ref|XP_003202798.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Meleagris
           gallopavo]
          Length = 314

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWASG+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP +KQFL+TKNVPC +RCKQ++Y +E++ IIE +  + GWVDT H     G  
Sbjct: 61  LKVKAYLPTDKQFLVTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTFHNAGIAGAT 120

Query: 374 IAIEDKISEISLDA 387
            A++    EI+LD 
Sbjct: 121 EAVK----EITLDC 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFLDEQDPSI--ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L+  D ++    I    ++     G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDDATLDTRQIVEVNKAKVDVGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|351700176|gb|EHB03095.1| Autophagy-related protein 3 [Heterocephalus glaber]
          Length = 314

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/132 (65%), Positives = 107/132 (81%), Gaps = 5/132 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTG-- 371
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAGIT 120

Query: 372 ---KDIAIEDKI 380
              K+I +E+K+
Sbjct: 121 EAVKEITLENKV 132



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|156395722|ref|XP_001637259.1| predicted protein [Nematostella vectensis]
 gi|156224370|gb|EDO45196.1| predicted protein [Nematostella vectensis]
          Length = 328

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 112/136 (82%), Gaps = 3/136 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ V N VKGTALGVAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQW+ G+E
Sbjct: 1   MQDVFNKVKGTALGVAEYLTPVLKESKFQETGVITPEEFVAAGDHLVHHCPTWQWSMGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           S+ K YLP +KQ+L T+NVPC +RCKQ+++ EE + I+E ++D  GWVDTHH  + +G+ 
Sbjct: 61  SRVKPYLPKDKQYLYTRNVPCYKRCKQMEHQEENEAIVEPDED-GGWVDTHHKVDPSGEK 119

Query: 374 I--AIEDKISEISLDA 387
           +   ++++ SE+ LD+
Sbjct: 120 VTAGVQEQFSEMKLDS 135



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/93 (72%), Positives = 86/93 (92%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL+V++MYED+SQD+AKKTVT+E+HPHLP   MAS+HPCRHA+VMKKII+TV +GG
Sbjct: 237 ENRKPLSVEEMYEDMSQDHAKKTVTIEAHPHLPMT-MASVHPCRHADVMKKIIQTVADGG 295

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GEL V+MYL+IFLKFVQ+VIPTIEYD+T+ FT+
Sbjct: 296 GELSVYMYLLIFLKFVQAVIPTIEYDYTRQFTM 328



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 2/70 (2%)

Query: 172 FEESGFLDEQDPSIAN-IPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQTPRL 229
           FEESG L+  + ++A  + P  QS SS  G     G+ I++TRTYD++ITYDKYYQTPRL
Sbjct: 171 FEESGMLENDEATLAVPVAPVSQSESSDGGTDATSGEGILQTRTYDMYITYDKYYQTPRL 230

Query: 230 WLYGYNERFK 239
           WLYGYNE  K
Sbjct: 231 WLYGYNENRK 240



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 39/48 (81%), Gaps = 4/48 (8%)

Query: 93  YDFTQN---FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Y + +N    +V++MYED+SQD+AKKTVT+E+HPHLP   MAS+HPCR
Sbjct: 233 YGYNENRKPLSVEEMYEDMSQDHAKKTVTIEAHPHLPM-TMASVHPCR 279


>gi|410928488|ref|XP_003977632.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Takifugu
           rubripes]
          Length = 315

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/133 (64%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+++N VKGTALGVAEYLTPVLKESKF+ETGV+TPEEFVAAGD+LVHHCPTW+WASG+E
Sbjct: 1   MQNMLNIVKGTALGVAEYLTPVLKESKFKETGVITPEEFVAAGDYLVHHCPTWKWASGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K YLP +KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  VKVKPYLPEDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSAVLG-- 118

Query: 374 IAIEDKISEISLD 386
             + D + +ISLD
Sbjct: 119 --VTDAVQDISLD 129



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 225 RQPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 284

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 285 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 315



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 226 QPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 266



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 9/71 (12%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD---IVRTRTYDLHITYDKYYQ 225
           ME++EESG L E D +  +    K++ +       ECG+   I++TRTYDL ITYDKYYQ
Sbjct: 159 MEEYEESGLL-ETDEATLDTSKIKENKAKV-----ECGNEDGILQTRTYDLCITYDKYYQ 212

Query: 226 TPRLWLYGYNE 236
           TPRLWL+GY+E
Sbjct: 213 TPRLWLFGYDE 223


>gi|291231902|ref|XP_002735901.1| PREDICTED: autophagy Apg3p/Aut1p-like [Saccoglossus kowalevskii]
          Length = 305

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 108/137 (78%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQS+IN++KGTALGVAE+LTPVLKESKF+ETGV+TPEEF+AAGDHLVHHCPTWQW+ G+E
Sbjct: 1   MQSMINNLKGTALGVAEFLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSVGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SK K+YL   KQFLIT+NVPC +RCKQ++Y +E + II+    + GWVDTHH        
Sbjct: 61  SKTKAYLVKEKQFLITRNVPCYKRCKQMEYSDENEAIIDENDGDGGWVDTHHNIGIELAS 120

Query: 374 IAIEDKISEISLDASTG 390
             I + + E+SL++ + 
Sbjct: 121 TNISEAVGEMSLESKSA 137



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+QMYED+SQD+ KKTVT+E+HPHLP   MAS+HPCRHA+VMKKII TV +GG
Sbjct: 230 ENRKPLTVNQMYEDISQDHVKKTVTIENHPHLP-MTMASVHPCRHADVMKKIIHTVADGG 288

Query: 69  GELGVHMYLIIF 80
           GE+GVHMY  +F
Sbjct: 289 GEVGVHMYPFLF 300



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 47/73 (64%), Gaps = 4/73 (5%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQEC--GDIVRTRTYDLHITYDKYYQT 226
           ME FEESG L+ +D   A I P K      A     C    I++TRTYDLHITYDKYYQT
Sbjct: 163 MEAFEESGMLEAEDN--ATIDPTKILAPEGANQGASCPESGILQTRTYDLHITYDKYYQT 220

Query: 227 PRLWLYGYNERFK 239
           PRLWLYGYNE  K
Sbjct: 221 PRLWLYGYNENRK 233



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 4/48 (8%)

Query: 93  YDFTQN---FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Y + +N    TV+QMYED+SQD+ KKTVT+E+HPHLP   MAS+HPCR
Sbjct: 226 YGYNENRKPLTVNQMYEDISQDHVKKTVTIENHPHLP-MTMASVHPCR 272


>gi|296226257|ref|XP_002758856.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Callithrix
           jacchus]
          Length = 314

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 87/133 (65%), Positives = 108/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLD 386
             I + + E++L+
Sbjct: 119 --ITEAVKELTLE 129



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|291202712|dbj|BAI82575.1| autophagy-related 3 [Haemaphysalis longicornis]
          Length = 327

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 109/136 (80%), Gaps = 3/136 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKGTALG A+ LTP+LKESKF+ETGV+TPEEFV AGDHLVHHCPTWQWASG+ 
Sbjct: 1   MQSVINTVKGTALGFADKLTPILKESKFKETGVLTPEEFVLAGDHLVHHCPTWQWASGEG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-GWVDTHHYDETTGK 372
             AKSYLP +KQFL+T+NVPC +RCK ++Y  E +K++E E DE+ GWVDTHHY +    
Sbjct: 61  LPAKSYLPADKQFLVTRNVPCYKRCKHMEYSMEHEKVLEEEGDEDGGWVDTHHYADAASS 120

Query: 373 DIAIEDKISEISLDAS 388
              + +++ E++L  S
Sbjct: 121 --GLSEQVQEMTLGPS 134



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 75/91 (82%), Positives = 87/91 (95%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL+++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCRHAEVMKKII+TV EGGGE
Sbjct: 237 REPLSMEAMYEDISQDHAKKTVTMEAHPHLPGPPMASVHPCRHAEVMKKIIQTVTEGGGE 296

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYLI+FLKFVQ+VIPTIEYD+TQNF +
Sbjct: 297 LGVHMYLIVFLKFVQAVIPTIEYDYTQNFAM 327



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +++ MYED+SQD+AKKTVTME+HPHLPGPPMAS+HPCR
Sbjct: 240 LSMEAMYEDISQDHAKKTVTMEAHPHLPGPPMASVHPCR 278



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 5/77 (6%)

Query: 166 ALDMEDFEESGFLDEQDPS--IANIPPEKQSPSSPAGD---SQECGDIVRTRTYDLHITY 220
           A DM+ F ESG LD  DP+  ++       +  S AGD   S   G IV TRTYDL+ITY
Sbjct: 160 ASDMDAFVESGLLDADDPATVLSKDEAAAAAAPSSAGDGDPSSLDGGIVSTRTYDLNITY 219

Query: 221 DKYYQTPRLWLYGYNER 237
           D YY+TPRLWLYGY+E+
Sbjct: 220 DNYYRTPRLWLYGYDEK 236


>gi|354471337|ref|XP_003497899.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Cricetulus
           griseus]
 gi|344247320|gb|EGW03424.1| Autophagy-related protein 3 [Cricetulus griseus]
          Length = 314

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVLTPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPAGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             + + + EI+L++
Sbjct: 119 --LTEAVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 7/101 (6%)

Query: 139 IKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFL--DEQDPSIANIPPEKQSPS 196
           ++SK S + Q C+ P   EEE+DD+ EA DME++EESG L  DE       I    +   
Sbjct: 128 LESKDSIKLQDCSAP-CDEEEEDDEGEAADMEEYEESGLLETDEATLDTRKIVEACKVKV 186

Query: 197 SPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNER 237
              G+      I++TRTYDL+ITYDKYYQTPRLWL+GY+E+
Sbjct: 187 DAGGEDV----ILQTRTYDLYITYDKYYQTPRLWLFGYDEQ 223


>gi|387019567|gb|AFJ51901.1| Ubiquitin-like-conjugating enzyme ATG3-like [Crotalus adamanteus]
          Length = 315

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 87/131 (66%), Positives = 106/131 (80%), Gaps = 5/131 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEF+AAGDHLVHHCPTWQW +G+E
Sbjct: 1   MQSVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFIAAGDHLVHHCPTWQWGTGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTG-- 371
            K K+YLP +KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT H    TG  
Sbjct: 61  LKVKAYLPTDKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTFHNAGITGVT 120

Query: 372 ---KDIAIEDK 379
              K+I +E+K
Sbjct: 121 EAIKEITVENK 131



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PL VD MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 223 EQRQPLNVDSMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 282

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 283 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 315



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 34/41 (82%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q   VD MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 226 QPLNVDSMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 266



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)

Query: 169 MEDFEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           ME++EE G L+  D ++      E     +  G  +E   I++TRTYDL+ITYDKYYQTP
Sbjct: 157 MEEYEERGLLETDDATLDTRKIVEAAKTKADVGGGEEA--ILQTRTYDLYITYDKYYQTP 214

Query: 228 RLWLYGYNER 237
           RLWL+GY+E+
Sbjct: 215 RLWLFGYDEQ 224


>gi|426217453|ref|XP_004002968.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Ovis aries]
          Length = 314

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  LKVKAYLPSGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 224 RQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 283

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 284 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 6/68 (8%)

Query: 172 FEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRL 229
           +EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQTPRL
Sbjct: 160 YEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQTPRL 215

Query: 230 WLYGYNER 237
           WL+GY+E+
Sbjct: 216 WLFGYDEQ 223


>gi|115496284|ref|NP_001068832.1| ubiquitin-like-conjugating enzyme ATG3 [Bos taurus]
 gi|122142419|sp|Q0VCL3.1|ATG3_BOVIN RecName: Full=Ubiquitin-like-conjugating enzyme ATG3; AltName:
           Full=Autophagy-related protein 3; Short=APG3-like
 gi|111304946|gb|AAI20111.1| ATG3 autophagy related 3 homolog (S. cerevisiae) [Bos taurus]
 gi|296491443|tpg|DAA33496.1| TPA: autophagy-related protein 3 [Bos taurus]
 gi|440899537|gb|ELR50829.1| Ubiquitin-like-conjugating enzyme ATG3 [Bos grunniens mutus]
          Length = 314

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  LKVKAYLPSGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|301763886|ref|XP_002917357.1| PREDICTED: autophagy-related protein 3-like [Ailuropoda
           melanoleuca]
          Length = 314

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  FKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 4/70 (5%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  +   A +   K   +  A    E  D I++TRTYDL+ITYDKYYQTP
Sbjct: 157 MEEYEESGLLETDE---ATLDTRKIVEACKAKTDAEGEDAILQTRTYDLYITYDKYYQTP 213

Query: 228 RLWLYGYNER 237
           RLWL+GY+E+
Sbjct: 214 RLWLFGYDEQ 223


>gi|355669951|gb|AER94690.1| ATG3 autophagy related 3-like protein [Mustela putorius furo]
          Length = 313

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 85/92 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFT 100
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFT 313



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKTKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|410970418|ref|XP_003991679.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Felis catus]
          Length = 314

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 4/70 (5%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  +   A +   K   +  A       D I++TRTYDL+ITYDKYYQTP
Sbjct: 157 MEEYEESGLLETDE---ATLDTRKMVEACKAKTDAGGEDAILQTRTYDLYITYDKYYQTP 213

Query: 228 RLWLYGYNER 237
           RLWL+GY+E+
Sbjct: 214 RLWLFGYDEQ 223


>gi|149731309|ref|XP_001503039.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Equus
           caballus]
          Length = 314

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 108/134 (80%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|321476755|gb|EFX87715.1| hypothetical protein DAPPUDRAFT_306423 [Daphnia pulex]
          Length = 318

 Score =  187 bits (475), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 84/111 (75%), Positives = 100/111 (90%), Gaps = 1/111 (0%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKGTALGVAEYLTPVLK+SKF+ETGV+TPEEFV AGDHLVHHCPTWQW++GDE
Sbjct: 1   MQNVINTVKGTALGVAEYLTPVLKDSKFKETGVLTPEEFVKAGDHLVHHCPTWQWSTGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTH 364
           SK K YLP NKQFL+T+NVPC +RCKQ++Y E+ +KI++ E  E GWVDTH
Sbjct: 61  SKIKPYLPKNKQFLLTRNVPCYKRCKQLEYTEQ-EKIVQPEDGEGGWVDTH 110



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/93 (82%), Positives = 88/93 (94%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL+VDQMYEDVSQD+AK+TVTMESHPH+PGPPMAS+HPCRHAEVMK  I+TV EGG
Sbjct: 226 ENRHPLSVDQMYEDVSQDHAKRTVTMESHPHIPGPPMASVHPCRHAEVMKFFIQTVTEGG 285

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            ELGVHMYLIIFLKFVQ+VIPTIEYD+TQNFT+
Sbjct: 286 RELGVHMYLIIFLKFVQAVIPTIEYDYTQNFTM 318



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 38/39 (97%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +VDQMYEDVSQD+AK+TVTMESHPH+PGPPMAS+HPCR
Sbjct: 231 LSVDQMYEDVSQDHAKRTVTMESHPHIPGPPMASVHPCR 269



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 32/35 (91%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           S+  G+I++TRTYDL+ITYDKYYQTPRLW+ G++E
Sbjct: 192 SESGGEIIQTRTYDLNITYDKYYQTPRLWVSGHDE 226


>gi|405977876|gb|EKC42303.1| Autophagy-related protein 3 [Crassostrea gigas]
          Length = 322

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 111/135 (82%), Gaps = 3/135 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKGTAL VAE  TPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQW++GDE
Sbjct: 1   MQNVINAVKGTALNVAEKFTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWSTGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQID-YCEEKQKIIENEQDEEGWVDTHHYDETTGK 372
           SK K YLP  KQ+LIT+NVPC +R KQ+D + EE++K+IE + ++ GWVDTHH+ +    
Sbjct: 61  SKVKPYLPKEKQYLITRNVPCYKRVKQVDSHKEEQEKVIEADDEDGGWVDTHHFPDP--G 118

Query: 373 DIAIEDKISEISLDA 387
             +++D + E++LD 
Sbjct: 119 TTSLQDAVQEMTLDG 133



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 89/93 (95%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+QMYED SQD+AKKTVTME+HPHLPGPP+AS+HPCRHA+VMKKII+ V EGG
Sbjct: 230 ENRKPLTVEQMYEDFSQDHAKKTVTMEAHPHLPGPPLASVHPCRHADVMKKIIQMVAEGG 289

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           G+LGVH+YL+IFLKFVQ+VIPTIEYDFT++FT+
Sbjct: 290 GDLGVHVYLMIFLKFVQAVIPTIEYDFTRDFTM 322



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 3/76 (3%)

Query: 164 EEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKY 223
           EEA+DME FE+SG LDE+D   A + P           + E G I++TRTYDL+ITYDKY
Sbjct: 161 EEAMDMEAFEQSGMLDEEDD--AALDPSTLGRQDSESAATESG-ILQTRTYDLNITYDKY 217

Query: 224 YQTPRLWLYGYNERFK 239
           YQTPRLWL+GY+E  K
Sbjct: 218 YQTPRLWLFGYDENRK 233



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 37/39 (94%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYED SQD+AKKTVTME+HPHLPGPP+AS+HPCR
Sbjct: 235 LTVEQMYEDFSQDHAKKTVTMEAHPHLPGPPLASVHPCR 273


>gi|126325703|ref|XP_001362623.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Monodelphis
           domestica]
          Length = 314

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 86/134 (64%), Positives = 109/134 (81%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G++
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGED 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 61  LKVKAYLPNGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNSGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             + + + EI+L++
Sbjct: 119 --VTEVVKEITLES 130



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    +  +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEANKVKNDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|58332690|ref|NP_001011420.1| ubiquitin-like-conjugating enzyme ATG3 [Xenopus (Silurana)
           tropicalis]
 gi|61211726|sp|Q5I0S6.1|ATG3_XENTR RecName: Full=Ubiquitin-like-conjugating enzyme ATG3; AltName:
           Full=Autophagy-related protein 3; Short=APG3-like
 gi|56972258|gb|AAH88024.1| autophagy-related 3-like (yeast) [Xenopus (Silurana) tropicalis]
 gi|89273771|emb|CAJ81702.1| APG3 autophagy 3-like (S. cerevisiae) [Xenopus (Silurana)
           tropicalis]
          Length = 312

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/133 (64%), Positives = 109/133 (81%), Gaps = 5/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEF+AAGDHLVHHCPTWQW++G+E
Sbjct: 1   MQSVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SK K YLP +KQFL+TKNVPC +RCKQ++Y +E++ IIE +  + GWVDT H+  T    
Sbjct: 61  SKIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTFHHSLT---- 116

Query: 374 IAIEDKISEISLD 386
             + + + EI+L+
Sbjct: 117 -GVTEAVKEITLE 128



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 220 EQRRPLTVENMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 279

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 280 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 312



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 6/98 (6%)

Query: 146 QTQSCNKPNST----EEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGD 201
           +TQ C K  S     +++DDD+ EA DMED+EESG LD  D ++     + +    P  D
Sbjct: 128 ETQDCGKTTSNIAVDDDDDDDEGEAADMEDYEESGLLDNDDATVDT--SKIKEACKPKAD 185

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
                 I++TRTYDL+ITYDKYYQTPRLWL+GY+E+ +
Sbjct: 186 LGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRR 223



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 34/39 (87%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 LTVENMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 263


>gi|395850329|ref|XP_003797743.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Otolemur
           garnettii]
          Length = 314

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 106/133 (79%), Gaps = 5/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTG-- 371
            K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H     G  
Sbjct: 61  VKVKAYLPTAKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAGIT 120

Query: 372 ---KDIAIEDKIS 381
              K+I +E K S
Sbjct: 121 EAVKEITVESKDS 133



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 222 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 282 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 314



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 225 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 265



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 157 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 212

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 213 PRLWLFGYDEQ 223


>gi|148237896|ref|NP_001085459.1| ubiquitin-like-conjugating enzyme ATG3 [Xenopus laevis]
 gi|61211772|sp|Q6GQE7.1|ATG3_XENLA RecName: Full=Ubiquitin-like-conjugating enzyme ATG3; AltName:
           Full=Autophagy-related protein 3; Short=APG3-like
 gi|49119108|gb|AAH72798.1| Atg3 protein [Xenopus laevis]
          Length = 313

 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 84/133 (63%), Positives = 109/133 (81%), Gaps = 4/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+V N+VKG AL VAEYLTPVLKESKF+ETGV+TPEEF+AAGDHLVHHCPTWQW++G+E
Sbjct: 1   MQNVFNTVKGKALEVAEYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SK K YLP +KQFL+TKNVPC +RCKQ++Y +E++ IIE +  + GWVDT H+   +G  
Sbjct: 61  SKIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTFHHTGLSG-- 118

Query: 374 IAIEDKISEISLD 386
             + + + EI+L+
Sbjct: 119 --VTEAVKEITLE 129



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PL V+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 221 EQRRPLAVENMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 280

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 281 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 313



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 165 EALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYY 224
           EA DMED+EESG L+  D ++     + +    P  D      I++TRTYDL+ITYDKYY
Sbjct: 152 EAADMEDYEESGLLENDDATVDT--SKIKEACKPKADLGGEDAILQTRTYDLYITYDKYY 209

Query: 225 QTPRLWLYGYNER 237
           QTPRLWL+GY+E+
Sbjct: 210 QTPRLWLFGYDEQ 222



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 33/39 (84%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
             V+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 226 LAVENMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 264


>gi|359323726|ref|XP_535740.3| PREDICTED: ubiquitin-like-conjugating enzyme ATG3 [Canis lupus
           familiaris]
          Length = 312

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/130 (65%), Positives = 105/130 (80%), Gaps = 4/130 (3%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           IN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E K K
Sbjct: 3   INTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVK 62

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIE 377
           +YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H    TG    I 
Sbjct: 63  AYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNAGVTG----IT 118

Query: 378 DKISEISLDA 387
           + + EI+L++
Sbjct: 119 EAVKEITLES 128



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 220 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 279

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 280 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 312



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 223 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 263



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 155 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 210

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 211 PRLWLFGYDEQ 221


>gi|289740569|gb|ADD19032.1| autophagy-related 3 [Glossina morsitans morsitans]
          Length = 326

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/135 (67%), Positives = 110/135 (81%), Gaps = 2/135 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSV+N+VKGTAL VAEYLTPVLKESKFRETGV+TPEEFVAAG+HLVHHCPTWQWA GDE
Sbjct: 1   MQSVLNTVKGTALNVAEYLTPVLKESKFRETGVLTPEEFVAAGEHLVHHCPTWQWAIGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +KAK+YLP ++QFLIT+NVPC RRCKQ++Y  E+  + E   D  GWV+TH  +E  G  
Sbjct: 61  AKAKAYLPKDRQFLITRNVPCYRRCKQMEYVGEETVVEEESGD-GGWVETHQLNE-DGTS 118

Query: 374 IAIEDKISEISLDAS 388
             ++ KI E++LD S
Sbjct: 119 AELDQKICELTLDDS 133



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 78/93 (83%), Positives = 89/93 (95%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HPCRHA++MKKII+TV EGG
Sbjct: 233 ENRKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHPCRHADIMKKIIQTVEEGG 292

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVH+YLIIFLKFVQ+VIPTIEYDFTQNF +
Sbjct: 293 GELGVHLYLIIFLKFVQTVIPTIEYDFTQNFNL 325



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 4/86 (4%)

Query: 158 EEDDDDEEALDMEDFEESGFLDEQDPSIANIP--PEKQSPSSPAGD-SQECGD-IVRTRT 213
           E D++D+EALDM++FEESG LD  DP++A      EK   +   GD + + GD ++ TRT
Sbjct: 151 EVDEEDDEALDMDEFEESGMLDLVDPALATTTRESEKSENNKVKGDNTADSGDSVLHTRT 210

Query: 214 YDLHITYDKYYQTPRLWLYGYNERFK 239
           YDLHITYDKYYQTPRLW+ GY+E  K
Sbjct: 211 YDLHITYDKYYQTPRLWVIGYDENRK 236



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 2/62 (3%)

Query: 78  IIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHP 135
           I + K+ Q+  +  I YD  +   TV+QMYEDVSQD+AKKTVTMESHPHLPGP MAS+HP
Sbjct: 215 ITYDKYYQTPRLWVIGYDENRKPLTVEQMYEDVSQDHAKKTVTMESHPHLPGPNMASVHP 274

Query: 136 CR 137
           CR
Sbjct: 275 CR 276


>gi|443722419|gb|ELU11288.1| hypothetical protein CAPTEDRAFT_160445 [Capitella teleta]
          Length = 304

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 85/130 (65%), Positives = 106/130 (81%), Gaps = 1/130 (0%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+V N ++G ALGVAEYL PVLKESKF+ETGV+TPEEF+AAG+HLVHHCPTWQWA+ +E
Sbjct: 1   MQNVKNFIQGKALGVAEYLVPVLKESKFKETGVITPEEFLAAGEHLVHHCPTWQWATLEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQID-YCEEKQKIIENEQDEEGWVDTHHYDETTGK 372
           SKAK YLPP+KQFLITKNVPC +R KQ+D + E+ +K+IE+E  E GWVDTHH+      
Sbjct: 61  SKAKPYLPPDKQFLITKNVPCYKRVKQVDSHKEDFEKVIEDEDGEGGWVDTHHFAGLAQL 120

Query: 373 DIAIEDKISE 382
           D A+++   E
Sbjct: 121 DGAVQEMTIE 130



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/93 (73%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+QMYED+SQD+  KTVT+E+HP++ GPPMAS+HPCRHA+VMKKIIE V EGG
Sbjct: 212 ENRKPLTVEQMYEDISQDHVHKTVTIEAHPYISGPPMASVHPCRHADVMKKIIENVAEGG 271

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            ELGVHMYL+IF+KFVQ+VIPTIEYD+T++FT+
Sbjct: 272 KELGVHMYLMIFMKFVQAVIPTIEYDYTRHFTM 304



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 39/48 (81%), Gaps = 3/48 (6%)

Query: 93  YDFTQN---FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Y + +N    TV+QMYED+SQD+  KTVT+E+HP++ GPPMAS+HPCR
Sbjct: 208 YGYDENRKPLTVEQMYEDISQDHVHKTVTIEAHPYISGPPMASVHPCR 255



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 35/45 (77%)

Query: 195 PSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           PS+    + E   I++TRTYDL+ITYDKYYQTPRLWLYGY+E  K
Sbjct: 171 PSTAVAAATEDDSILQTRTYDLNITYDKYYQTPRLWLYGYDENRK 215


>gi|343960288|dbj|BAK63998.1| autophagy-related protein 3 [Pan troglodytes]
          Length = 118

 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 81/112 (72%), Positives = 97/112 (86%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHH 365
            K K+YLP  KQF +TKNVPC +RCKQ++Y +E + IIE +  + GWVDT+H
Sbjct: 61  LKVKAYLPTGKQFSVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYH 112


>gi|226372518|gb|ACO51884.1| Autophagy-related protein 3 [Rana catesbeiana]
          Length = 313

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/134 (61%), Positives = 106/134 (79%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQSVIN++KG AL VAEY TP LKESKF+ETGV+TPEEF+AAGDHLVHHCPTWQWA+G++
Sbjct: 1   MQSVINTMKGKALEVAEYWTPALKESKFKETGVITPEEFLAAGDHLVHHCPTWQWAAGED 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           SK K YLP  KQFL+TKNVPC +RCKQ++Y +E++ IIE +  + GWVDT H+       
Sbjct: 61  SKVKPYLPNEKQFLVTKNVPCYKRCKQMEYSDEQEAIIEEDDGDGGWVDTSHHAGVGN-- 118

Query: 374 IAIEDKISEISLDA 387
             + + + EI+L++
Sbjct: 119 --LTESVKEITLES 130



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/91 (78%), Positives = 84/91 (92%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HP+LP P M S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 223 RKPLTVEHMYEDISQDHVKKTVTIENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGE 282

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 283 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 313



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 169 MEDFEESGFLDEQDPSI--ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L+  D ++  A I    +  +   GD      I++TRTYDL+ITYDKYYQT
Sbjct: 156 MEEYEESGLLENDDATVDTAKIAEACKQKTDVVGDDA----ILQTRTYDLYITYDKYYQT 211

Query: 227 PRLWLYGYNERFK 239
           PRLWL+GY+E+ K
Sbjct: 212 PRLWLFGYDEQRK 224



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 33/39 (84%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+ MYED+SQD+ KKTVT+E+HP+LP P M S+HPCR
Sbjct: 226 LTVEHMYEDISQDHVKKTVTIENHPNLPPPAMCSVHPCR 264


>gi|196014717|ref|XP_002117217.1| hypothetical protein TRIADDRAFT_32195 [Trichoplax adhaerens]
 gi|190580182|gb|EDV20267.1| hypothetical protein TRIADDRAFT_32195 [Trichoplax adhaerens]
          Length = 324

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 84/144 (58%), Positives = 104/144 (72%), Gaps = 10/144 (6%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M+ +I+S+K  AL  A++LTPVLKESKFRETGV+TPEEFVAAGD+LVH CPTWQW SG+E
Sbjct: 1   MERMIHSLKSNALATAQFLTPVLKESKFRETGVITPEEFVAAGDYLVHQCPTWQWTSGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHH-------Y 366
           SK KSYLP  KQFLIT+NVPC RRCK ++Y EE + I+E + +  GW+DTHH        
Sbjct: 61  SKMKSYLPREKQFLITRNVPCYRRCKHMEYVEENETIVEEDSEIGGWIDTHHNVQLGDTL 120

Query: 367 DETTGKDI---AIEDKISEISLDA 387
             T   D    A++D+I  IS D 
Sbjct: 121 GATAANDAPLSALQDQIVNISRDG 144



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/91 (74%), Positives = 81/91 (89%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL V++MYED SQD+AKKT+TMESHPHL    MAS+HPCRHAEVMKKII+TV +GG E
Sbjct: 234 RQPLKVEEMYEDFSQDHAKKTITMESHPHLLNSTMASVHPCRHAEVMKKIIQTVQDGGHE 293

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVH+YL+IFLKFVQ+VIPTIEYD+T+ FT+
Sbjct: 294 LGVHVYLVIFLKFVQAVIPTIEYDYTRQFTM 324



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME FEESG LD+ + ++      + + S+  G + + G I++TRTYDLHITYDKYYQTPR
Sbjct: 166 MEAFEESGLLDDDNATLVTKDSTELNASAIDGAAAD-GGILQTRTYDLHITYDKYYQTPR 224

Query: 229 LWLYGYNE 236
           LWL+GY+E
Sbjct: 225 LWLFGYDE 232



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 33/41 (80%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q   V++MYED SQD+AKKT+TMESHPHL    MAS+HPCR
Sbjct: 235 QPLKVEEMYEDFSQDHAKKTITMESHPHLLNSTMASVHPCR 275


>gi|328703702|ref|XP_001949218.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like
           [Acyrthosiphon pisum]
          Length = 335

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 84/130 (64%), Positives = 102/130 (78%), Gaps = 3/130 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ++INSVKGTALG A  LTPVLKESKF++TGVVTP EFV AGDHLVH CPTW+WA GDE
Sbjct: 1   MQNIINSVKGTALGFAGLLTPVLKESKFKDTGVVTPNEFVIAGDHLVHTCPTWEWACGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K KSYLP +KQ+LIT+NVPC RR +QI+  E  + I+E E+  EGWV+THH D +    
Sbjct: 61  CKIKSYLPKDKQYLITRNVPCLRRYQQIENSEIIENIVELEEGNEGWVETHHSDSS---H 117

Query: 374 IAIEDKISEI 383
           + + +KISEI
Sbjct: 118 LPMNEKISEI 127



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/93 (67%), Positives = 81/93 (87%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +++ PL++++M+EDVS DYAKKTVTM+SHPH+PGP MASIHPC+HAEVMKK+I+ + +  
Sbjct: 243 ENKNPLSMEEMFEDVSHDYAKKTVTMDSHPHIPGPSMASIHPCKHAEVMKKMIKIMKKRS 302

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
             L VHMYLIIFLKFVQSVIPTI+YD+TQN  +
Sbjct: 303 KHLKVHMYLIIFLKFVQSVIPTIDYDYTQNINL 335



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 5/73 (6%)

Query: 165 EALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYY 224
           EA+DM+ F ESG L++   ++ +   E++   + + D     +I++TRTYDLHITYDK+Y
Sbjct: 177 EAIDMDAFVESGMLEDDSATVYSTQNERKQLKNTSID-----EILKTRTYDLHITYDKFY 231

Query: 225 QTPRLWLYGYNER 237
           QTPRLW+YGYNE 
Sbjct: 232 QTPRLWIYGYNEN 244



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 4/63 (6%)

Query: 78  IIFLKFVQSVIPTIEYDFTQN---FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIH 134
           I + KF Q+    I Y + +N    ++++M+EDVS DYAKKTVTM+SHPH+PGP MASIH
Sbjct: 225 ITYDKFYQTPRLWI-YGYNENKNPLSMEEMFEDVSHDYAKKTVTMDSHPHIPGPSMASIH 283

Query: 135 PCR 137
           PC+
Sbjct: 284 PCK 286


>gi|351711506|gb|EHB14425.1| Autophagy-related protein 3 [Heterocephalus glaber]
          Length = 319

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 88/134 (65%), Positives = 106/134 (79%), Gaps = 6/134 (4%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VA++LTPVLKESKF+ETGVVTPEEFVAAGDHLVHHCPTWQWA+G+E
Sbjct: 1   MQNVINTVKGKALEVAKHLTPVLKESKFKETGVVTPEEFVAAGDHLVHHCPTWQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNV C + CKQI+Y +E + IIE      GWVDT+H    TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVSCYKCCKQIEYSDELEAIIEENDGGGGWVDTYH---NTG-- 115

Query: 374 IA-IEDKISEISLD 386
           IA I + + EI+L+
Sbjct: 116 IARITEAVKEITLE 129



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 80/97 (82%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLTV+ MYE +SQD+ KKTVT+E+HPHLP PP+  IHPCRHAEVMKK IETV EG GE G
Sbjct: 223 PLTVEHMYEAISQDHVKKTVTIENHPHLPPPPICFIHPCRHAEVMKKTIETVAEGRGEFG 282

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTVDQMYEDVS 109
           VHM+L+IFLKFVQ+VIPTIEY +T++  V +  + +S
Sbjct: 283 VHMFLLIFLKFVQAVIPTIEYGYTRHNNVTKRMQKLS 319



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 10/103 (9%)

Query: 139 IKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFL--DEQDPSIANIPPEKQSPS 196
           +++K S + Q C    S   E+D++ EA D+E++EESG L  DE    I  I    ++ +
Sbjct: 128 LENKDSIKLQDC----SALCEEDNEGEAADVEEYEESGLLETDEATLDIRKIVEACKAKT 183

Query: 197 SPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
              G+      I++TRTYDL+ITYDKYYQTP LWL+ Y+E+++
Sbjct: 184 DAGGEDA----ILQTRTYDLYITYDKYYQTPGLWLFVYDEQWQ 222



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 33/41 (80%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYE +SQD+ KKTVT+E+HPHLP PP+  IHPCR
Sbjct: 222 QPLTVEHMYEAISQDHVKKTVTIENHPHLPPPPICFIHPCR 262


>gi|431920121|gb|ELK18165.1| Autophagy-related protein 3 [Pteropus alecto]
          Length = 336

 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 87/156 (55%), Positives = 108/156 (69%), Gaps = 26/156 (16%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLK----------------------ESKFRETGVVTPEE 291
           MQ+VIN+VKG AL VAEYLTPVLK                      ESKF+ETGV+TPEE
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKVNLEPRSVRTPVTPHPSEQHFWESKFKETGVITPEE 60

Query: 292 FVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKII 351
           FVAAGDHLVHHCPTWQWA+G+E K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + II
Sbjct: 61  FVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAII 120

Query: 352 ENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLDA 387
           E +  + GWVDT+H     G    I + + EI+L++
Sbjct: 121 EEDDGDGGWVDTYHNTGIAG----ITEAVKEITLES 152



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 244 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 303

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 304 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 336



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 247 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 287



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 179 MEEYEESGLLETDEATLDTRKIAEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 234

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 235 PRLWLFGYDEQ 245


>gi|198417161|ref|XP_002127433.1| PREDICTED: similar to APG3 autophagy 3-like [Ciona intestinalis]
          Length = 310

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/133 (61%), Positives = 106/133 (79%), Gaps = 5/133 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+V NSVK +ALGVAE LTPVLKESKF+ETGV+TPEEFV AGD LVHHCPTWQW +GD+
Sbjct: 1   MQNVFNSVKSSALGVAELLTPVLKESKFKETGVLTPEEFVIAGDFLVHHCPTWQWLAGDK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +K K+YLP +KQ+L+T+NVPC +RCKQ++Y EE + II++  D  GWVDTHH  E     
Sbjct: 61  TKTKAYLPQDKQYLMTRNVPCHKRCKQMEYNEEHEAIIDDIGD-GGWVDTHHNVEVD--- 116

Query: 374 IAIEDKISEISLD 386
              +++I E++L+
Sbjct: 117 -KAQEEIKEMTLN 128



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 60/91 (65%), Positives = 81/91 (89%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL++ +MYED+SQD+  KTVT+E HPHLP P M S+HPC+HA+VMKKI++TV +GGG+
Sbjct: 220 RKPLSMVEMYEDISQDHVNKTVTIEPHPHLPPPNMCSVHPCKHADVMKKIMQTVEDGGGK 279

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           L VHMYL++FLKFVQ+VIPTIEYD+T++F++
Sbjct: 280 LEVHMYLLVFLKFVQAVIPTIEYDYTRHFSL 310



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 5/74 (6%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQ 225
           ALDME++ E   L+ +D  +  +  +K + SS    + E G I++TRTYDLHITYDKYYQ
Sbjct: 153 ALDMENYAE--MLESEDKVVDLVAVKKANTSST---TNEDGGIIQTRTYDLHITYDKYYQ 207

Query: 226 TPRLWLYGYNERFK 239
           TPRLWL GYNE  K
Sbjct: 208 TPRLWLSGYNEDRK 221



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 31/39 (79%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            ++ +MYED+SQD+  KTVT+E HPHLP P M S+HPC+
Sbjct: 223 LSMVEMYEDISQDHVNKTVTIEPHPHLPPPNMCSVHPCK 261


>gi|432097763|gb|ELK27811.1| Ubiquitin-like-conjugating enzyme ATG3 [Myotis davidii]
          Length = 268

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 80/134 (59%), Positives = 102/134 (76%), Gaps = 4/134 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYL PVLKESKF+ETGV+T EEFVAAG HL HHCPTWQW +G+E
Sbjct: 1   MQNVINTVKGKALKVAEYLAPVLKESKFKETGVITQEEFVAAGAHLAHHCPTWQWVTGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K+YLP  KQFL+TKNVPC + CKQ++Y +E + +IE +  + GWVDT+     TG  
Sbjct: 61  LKVKAYLPTGKQFLVTKNVPCYKWCKQMEYSDELEAVIEEDDSDGGWVDTYPNTGITG-- 118

Query: 374 IAIEDKISEISLDA 387
             I + + EI+L++
Sbjct: 119 --ITEAVKEITLES 130



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 4/73 (5%)

Query: 166 ALDMEDFEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYY 224
           A DME++EE G L+  + ++      E +   + AG+      I++TRTY+L+ITYDKYY
Sbjct: 154 AADMEEYEERGLLETDEATLDTRKIGEARKAKTDAGNEDA---ILQTRTYNLYITYDKYY 210

Query: 225 QTPRLWLYGYNER 237
           QTPRLWL+GYNE+
Sbjct: 211 QTPRLWLFGYNEQ 223



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 5/45 (11%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPM 45
            G N Q    R PLTV+ MYED+SQD+ KKTVT+ +HPH P P +
Sbjct: 218 FGYNEQ----RQPLTVENMYEDISQDHVKKTVTIGNHPH-PHPLL 257



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPM 130
           Q  TV+ MYED+SQD+ KKTVT+ +HPH P P +
Sbjct: 225 QPLTVENMYEDISQDHVKKTVTIGNHPH-PHPLL 257


>gi|339237277|ref|XP_003380193.1| autophagy-related protein 3 [Trichinella spiralis]
 gi|316977011|gb|EFV60191.1| autophagy-related protein 3 [Trichinella spiralis]
          Length = 311

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 92/113 (81%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M + +N+ K +ALGVA Y TP+LKESKFRE+GV+TP+EFV AGDHLV  CPTWQW +GD 
Sbjct: 1   MDTFVNTFKSSALGVATYFTPLLKESKFRESGVITPDEFVEAGDHLVFLCPTWQWMTGDS 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHY 366
           +  K+YLP +KQFL+TKNVPC RRCK I+Y + ++KIIE  + +EGWVDTH+Y
Sbjct: 61  ASVKAYLPKDKQFLVTKNVPCYRRCKDIEYLQGQEKIIEESESDEGWVDTHYY 113



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 78/93 (83%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +++  LTV +MYED SQD+ KKT+T+E+HPH+P PPMASIHPCRHAE+MK++IE   E G
Sbjct: 218 ENKTLLTVKEMYEDFSQDHLKKTITVETHPHIPSPPMASIHPCRHAEMMKRLIERFEEDG 277

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           G L VH Y+I+FLKFVQSVIPTIEYDF++  ++
Sbjct: 278 GRLMVHQYMIVFLKFVQSVIPTIEYDFSKKISL 310



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/39 (71%), Positives = 34/39 (87%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV +MYED SQD+ KKT+T+E+HPH+P PPMASIHPCR
Sbjct: 223 LTVKEMYEDFSQDHLKKTITVETHPHIPSPPMASIHPCR 261



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 10/72 (13%)

Query: 166 ALDMEDFEESGFLDEQDP-SIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYY 224
           A  M+DF  +G L+E+DP ++  + P+         +S E  +I RTRTYDL ITYDKYY
Sbjct: 156 AASMDDFFTNG-LEEEDPHTLVTVRPK-------CMNSVE-DNIRRTRTYDLSITYDKYY 206

Query: 225 QTPRLWLYGYNE 236
           Q PR+WL+GY+E
Sbjct: 207 QVPRMWLFGYDE 218


>gi|225714240|gb|ACO12966.1| Autophagy-related protein 3 [Lepeophtheirus salmonis]
          Length = 309

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 80/128 (62%), Positives = 101/128 (78%), Gaps = 4/128 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ++ N+ K  AL  AE LTPVLKESKF ETGV+TPEEFVAAGDHLVH CP+W+W++G E
Sbjct: 1   MQNLYNNFKSQALKAAELLTPVLKESKFHETGVLTPEEFVAAGDHLVHQCPSWKWSTGAE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQ-IDYCEEKQKIIENEQDEEGWVDTHHYDETTG- 371
            + K YLPP+KQFLIT+NVPC +RCKQ +DY  E++ II  E ++EGWVDTHH+ +T   
Sbjct: 61  FR-KDYLPPDKQFLITRNVPCHKRCKQMVDYSSEQELIIPGEDNDEGWVDTHHFSQTVSD 119

Query: 372 -KDIAIED 378
            K++ IED
Sbjct: 120 LKEMKIED 127



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 70/93 (75%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  LTVD+MYED S+D+A KT+TMESHPHLPG P AS+HPC+HA+VMKK+I+ + EGG
Sbjct: 215 ESRKALTVDEMYEDFSEDHANKTITMESHPHLPGLPQASVHPCQHAKVMKKLIDQITEGG 274

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLIIFLKFVQ++IPTIEYDFTQNF++
Sbjct: 275 GELGVHMYLIIFLKFVQAIIPTIEYDFTQNFSI 307



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 52/74 (70%), Gaps = 7/74 (9%)

Query: 167 LDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           LDMEDF ESG LDE DPS        +  SS   DS + G+IV TRTYDL+ITYDK+YQT
Sbjct: 153 LDMEDFVESGLLDEVDPSTY------KDNSSKNVDS-DGGEIVSTRTYDLNITYDKFYQT 205

Query: 227 PRLWLYGYNERFKG 240
           PRLWLYGY+E  K 
Sbjct: 206 PRLWLYGYDESRKA 219



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 35/42 (83%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIK 140
            TVD+MYED S+D+A KT+TMESHPHLPG P AS+HPC+  K
Sbjct: 220 LTVDEMYEDFSEDHANKTITMESHPHLPGLPQASVHPCQHAK 261


>gi|308473640|ref|XP_003099044.1| CRE-ATG-3 protein [Caenorhabditis remanei]
 gi|308267847|gb|EFP11800.1| CRE-ATG-3 protein [Caenorhabditis remanei]
          Length = 225

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 98/122 (80%), Gaps = 7/122 (5%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGD 312
           MQ ++NS K T L + E LTPVLKESKFRETGV+TPEE+VAAGDHLVHHCPTW+W+ + D
Sbjct: 3   MQDIVNSFKSTVLSIGESLTPVLKESKFRETGVLTPEEYVAAGDHLVHHCPTWKWSKASD 62

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQ------DEEGWVDTHHY 366
            SK +++LP +KQFLIT+NVPC +RCKQ++Y E+ +KII + +      +E GWVDTHHY
Sbjct: 63  PSKIRTFLPVDKQFLITRNVPCHKRCKQMEYDEKLEKIINDTEGEFATDEESGWVDTHHY 122

Query: 367 DE 368
           ++
Sbjct: 123 EK 124



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 158 EEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLH 217
           E D DDEEA+D++D  ESG LD ++           +P + A  + E  ++ + RTYDLH
Sbjct: 145 ESDSDDEEAIDLDDLIESGALDVEENDPNRFVATTMTPVTAA--TTESSEVEKIRTYDLH 202

Query: 218 ITYDKYYQ 225
           I YDKYYQ
Sbjct: 203 ICYDKYYQ 210


>gi|225719546|gb|ACO15619.1| Autophagy-related protein 3 [Caligus clemensi]
          Length = 312

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/130 (61%), Positives = 101/130 (77%), Gaps = 3/130 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ++ N+ K  AL  AE LTPVLKESKF ETGV+TPEEFVAAGDHLVH CP+W+W+SG E
Sbjct: 1   MQNLYNNFKSQALKAAELLTPVLKESKFHETGVITPEEFVAAGDHLVHQCPSWKWSSGVE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQ-IDYCEEKQKIIENEQDEEGWVDTHHYDETTGK 372
           +  K YLPP+KQFLIT+NVPC +RCKQ +DY  E++ I+  + +EEGWVDTHH+ + +  
Sbjct: 61  A-GKDYLPPDKQFLITRNVPCHKRCKQMMDYSSEQELILPGDDNEEGWVDTHHFAQASS- 118

Query: 373 DIAIEDKISE 382
           D+  E KI E
Sbjct: 119 DLISEMKIEE 128



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/93 (75%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  LTVD+MYED SQD+A KT+TME+HPHLPG P AS+HPC+HA+VMKK+I+ + EGG
Sbjct: 218 ESRKALTVDEMYEDFSQDHANKTITMETHPHLPGVPQASVHPCQHAKVMKKLIDQITEGG 277

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYLIIFLKFVQ++IPTIEYDFTQNF++
Sbjct: 278 GELGVHMYLIIFLKFVQAIIPTIEYDFTQNFSI 310



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 2/85 (2%)

Query: 156 TEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYD 215
            +EE+++D+  LDMEDF ESG LDE DPS        +S S  A  S + G+IV TRTYD
Sbjct: 140 ADEEEENDDAPLDMEDFVESGLLDEVDPS--TFKDTGKSTSKVAEGSLDGGEIVCTRTYD 197

Query: 216 LHITYDKYYQTPRLWLYGYNERFKG 240
           L+IT DK+YQTPRLWL+GY+E  K 
Sbjct: 198 LNITCDKFYQTPRLWLFGYDESRKA 222



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)

Query: 59  KIIETVLEGGGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAK 114
           K+ E  L+GG  +    Y   I   KF Q+  +    YD ++   TVD+MYED SQD+A 
Sbjct: 179 KVAEGSLDGGEIVCTRTYDLNITCDKFYQTPRLWLFGYDESRKALTVDEMYEDFSQDHAN 238

Query: 115 KTVTMESHPHLPGPPMASIHPCRAIK 140
           KT+TME+HPHLPG P AS+HPC+  K
Sbjct: 239 KTITMETHPHLPGVPQASVHPCQHAK 264


>gi|344282301|ref|XP_003412912.1| PREDICTED: hypothetical protein LOC100667402 [Loxodonta africana]
          Length = 836

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 746 RQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 805

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 806 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 836



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 85/109 (77%), Gaps = 4/109 (3%)

Query: 278 ESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRR 337
           ESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E K K+YLP  KQFL+TKNVPC +R
Sbjct: 548 ESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKR 607

Query: 338 CKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLD 386
           CKQ++Y +E + IIE +  + GWVDT+H     G    I + + EI+L+
Sbjct: 608 CKQMEYSDELEAIIEEDDGDGGWVDTYHNAGVAG----ITEAVKEITLE 652



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 747 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 787



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 6/70 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 679 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 734

Query: 227 PRLWLYGYNE 236
           PRLWL+GY+E
Sbjct: 735 PRLWLFGYDE 744


>gi|268553721|ref|XP_002634847.1| Hypothetical protein CBG13964 [Caenorhabditis briggsae]
          Length = 316

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 97/122 (79%), Gaps = 7/122 (5%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-D 312
           MQ ++NS K  AL + E  TPVLKESKFRETGV+TPEE+VAAGDHLVHHCPTW+W++  D
Sbjct: 1   MQDIVNSFKSAALSIGETFTPVLKESKFRETGVLTPEEYVAAGDHLVHHCPTWKWSTASD 60

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQ------DEEGWVDTHHY 366
            SK + +LP +KQFLITKNVPC +RCKQ++Y E+ +KII +++      +E GWVDTHHY
Sbjct: 61  PSKIRPFLPADKQFLITKNVPCHKRCKQMEYDEKLEKIINDDEGEYATGEESGWVDTHHY 120

Query: 367 DE 368
           ++
Sbjct: 121 EK 122



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 53/89 (59%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTVDQ YED S D++ KT+T+E+HP +    M ++HPC+HAE+MK++I    E G
Sbjct: 225 ENRRPLTVDQTYEDFSADHSNKTITVETHPSM-DLQMPTVHPCKHAEMMKRLINQYAESG 283

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQ 97
            ELGVH YL +FLKFVQ+VIPTIEYDFT+
Sbjct: 284 KELGVHEYLFLFLKFVQAVIPTIEYDFTR 312



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 157 EEEDDDDEEALDMEDFEESGFLD--EQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTY 214
           E +DD D EALD++D  ESG LD  E D        EK +  + +       ++ + RTY
Sbjct: 144 ESDDDSDGEALDLDDLIESGALDSDENDDDPNRFVNEKAAKLNTSSGDAAGAEVEKIRTY 203

Query: 215 DLHITYDKYYQTPRLWLYGYNE 236
           DLHI YDKYYQ PRL+L GY+E
Sbjct: 204 DLHICYDKYYQVPRLFLMGYDE 225



 Score = 44.7 bits (104), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TVDQ YED S D++ KT+T+E+HP +    M ++HPC+
Sbjct: 230 LTVDQTYEDFSADHSNKTITVETHPSM-DLQMPTVHPCK 267


>gi|17543646|ref|NP_500024.1| Protein ATG-3 [Caenorhabditis elegans]
 gi|373220575|emb|CCD74062.1| Protein ATG-3 [Caenorhabditis elegans]
          Length = 305

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 75/120 (62%), Positives = 96/120 (80%), Gaps = 7/120 (5%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGD 312
           MQ+++N++K  AL + E  TPVL+ESKFRETGV+TPEE+VAAGDHLVHHCPTW+WA + D
Sbjct: 1   MQNLVNNLKSAALQIGETFTPVLRESKFRETGVLTPEEYVAAGDHLVHHCPTWKWAGASD 60

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENE------QDEEGWVDTHHY 366
            SK +++LP +KQFLIT+NVPC +RCKQ++Y E+ +KII  E       DE GWVDTHHY
Sbjct: 61  PSKIRTFLPIDKQFLITRNVPCHKRCKQMEYDEKLEKIINEEDGEYQTSDETGWVDTHHY 120



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/89 (56%), Positives = 69/89 (77%), Gaps = 1/89 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+Q YED S D++ KT+T+E+HP +    M ++HPC+HAE+MK++I    E G
Sbjct: 214 ENRRPLTVEQTYEDFSADHSNKTITVEAHPSV-DLTMPTVHPCKHAEMMKRLINQYAESG 272

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQ 97
             LGVH YL +FLKFVQ+VIPTIEYD+T+
Sbjct: 273 KVLGVHEYLFLFLKFVQAVIPTIEYDYTR 301



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 28/38 (73%)

Query: 199 AGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           A  +   G++ + RTYDLHI YDKYYQ PRL+L GY+E
Sbjct: 177 AAGNDNSGEVEKVRTYDLHICYDKYYQVPRLFLMGYDE 214



 Score = 41.6 bits (96), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+Q YED S D++ KT+T+E+HP +    M ++HPC+
Sbjct: 219 LTVEQTYEDFSADHSNKTITVEAHPSV-DLTMPTVHPCK 256


>gi|432119334|gb|ELK38416.1| Ubiquitin-like-conjugating enzyme ATG3 [Myotis davidii]
          Length = 513

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 85/91 (93%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGGGE
Sbjct: 423 RQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGE 482

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 483 LGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 513



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 8/92 (8%)

Query: 300 VHHCPTWQW----ASGDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQ 355
           +H+C  W      ASG+E K K+YLP  KQFL+TKNVPC +RCKQ++Y +E + IIE + 
Sbjct: 242 LHNCSDWLVGVAEASGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDD 301

Query: 356 DEEGWVDTHHYDETTGKDIAIEDKISEISLDA 387
            + GWVDT+H    TG    I + + EI+L++
Sbjct: 302 GDGGWVDTYHNTGITG----ITEAVKEITLES 329



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 424 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 464



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 2/69 (2%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPR 228
           ME++EESG L+  + ++      +   +     S++   I++TRTY+L+ITYDKYYQTPR
Sbjct: 356 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGSED--AILQTRTYNLYITYDKYYQTPR 413

Query: 229 LWLYGYNER 237
           LWL+GY+E+
Sbjct: 414 LWLFGYDEQ 422



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/27 (77%), Positives = 24/27 (88%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESK 280
           MQ+VIN+VKG AL VAEYLTPVLK S+
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKVSR 27


>gi|281352103|gb|EFB27687.1| hypothetical protein PANDA_005576 [Ailuropoda melanoleuca]
          Length = 236

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 144 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 203

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 204 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 236



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 147 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 187



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 4/70 (5%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD-IVRTRTYDLHITYDKYYQTP 227
           ME++EESG L+  +   A +   K   +  A    E  D I++TRTYDL+ITYDKYYQTP
Sbjct: 79  MEEYEESGLLETDE---ATLDTRKIVEACKAKTDAEGEDAILQTRTYDLYITYDKYYQTP 135

Query: 228 RLWLYGYNER 237
           RLWL+GY+E+
Sbjct: 136 RLWLFGYDEQ 145



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 4/56 (7%)

Query: 332 VPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLDA 387
           VPC +RCKQ++Y +E + IIE +  + GWVDT+H     G    I + + EI+L++
Sbjct: 1   VPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG----ITEAVKEITLES 52


>gi|444732123|gb|ELW72435.1| Ubiquitin-like-conjugating enzyme ATG3 [Tupaia chinensis]
          Length = 240

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 148 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 207

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 208 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 240



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 151 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 191



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 7/102 (6%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFL--DEQDPSIANIPPEKQSP 195
            ++SK S + Q C+ P   EEE++D+ EA DME++EES  L  DE       I    ++ 
Sbjct: 53  TLESKDSIKLQDCSAP-CEEEEEEDEGEAADMEEYEESRLLETDEATLDTRRIVEACKAK 111

Query: 196 SSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNER 237
           +   G+      I++TRTYDL+ITYDKYYQTP LWL+GY+E+
Sbjct: 112 TDAGGEDA----ILQTRTYDLYITYDKYYQTPPLWLFGYDEQ 149



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 5/61 (8%)

Query: 327 LITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLD 386
           ++TKNVPC +RCKQ++Y +E + IIE++ D  GWVDT+H    TG    + + + EI+L+
Sbjct: 1   MVTKNVPCYKRCKQMEYSDELEAIIEDDGD-GGWVDTYHNTGITG----VTEAVKEITLE 55

Query: 387 A 387
           +
Sbjct: 56  S 56


>gi|391332594|ref|XP_003740718.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Metaseiulus
           occidentalis]
          Length = 301

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 96/122 (78%), Gaps = 1/122 (0%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQS++N++KG A+ +A  +TPVLKES+FRE+G++TPEEFVAAGDHLV  CPTW WA GD 
Sbjct: 1   MQSIVNTIKGRAIDLAAQMTPVLKESRFRESGMLTPEEFVAAGDHLVATCPTWNWAKGDA 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYD-ETTGK 372
           S  K+YLP +KQFL+T+NVPC +RC+ ++Y  E +K+IE+E   EGWVD + Y   TT K
Sbjct: 61  SYVKTYLPEDKQFLVTRNVPCSKRCRDMEYNSESEKVIEDEGAGEGWVDPYFYAPPTTFK 120

Query: 373 DI 374
           DI
Sbjct: 121 DI 122



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/89 (67%), Positives = 76/89 (85%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL   ++YED+SQD+AKKTVT+E HPHL GPP AS+HPC+HA+ MK +I+TV +GGG L 
Sbjct: 212 PLRTKELYEDISQDFAKKTVTVEPHPHLDGPPQASVHPCKHAQAMKNLIQTVEDGGGCLE 271

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VHMYLI+FLKFVQ+VIPTI+YD+T NF +
Sbjct: 272 VHMYLIVFLKFVQAVIPTIDYDYTTNFNM 300



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 94  DFTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ Q     ++YED+SQD+AKKTVT+E HPHL GPP AS+HPC+
Sbjct: 208 EYHQPLRTKELYEDISQDFAKKTVTVEPHPHLDGPPQASVHPCK 251



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 15/114 (13%)

Query: 123 PHLPGPPMASIHPCRAIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQD 182
           P+   PP       + I    ++Q+Q+  + +  + EDDDD EA+DM+ F E+  LDE D
Sbjct: 110 PYFYAPPTT----FKDINKTGTSQSQAGGEKDDEDNEDDDDGEAVDMDAFLEN--LDE-D 162

Query: 183 PSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  A+    KQ         +ECG ++ TRTYDL+ITYD YY+TPRLWL GY+E
Sbjct: 163 PGAASETVVKQP-------EEECG-VLSTRTYDLNITYDNYYRTPRLWLTGYDE 208


>gi|345329819|ref|XP_001514234.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like
           [Ornithorhynchus anatinus]
          Length = 299

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 207 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 266

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 267 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 299



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 87/110 (79%), Gaps = 4/110 (3%)

Query: 277 KESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPR 336
           +ESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWASG+E K K+YLPP KQFL+TKNVPC +
Sbjct: 4   QESKFKETGVITPEEFVAAGDHLVHHCPTWQWASGEELKIKAYLPPGKQFLVTKNVPCYK 63

Query: 337 RCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLD 386
           RCKQ++Y +E + IIE +  + GWVDT+H     G    + + + EI+LD
Sbjct: 64  RCKQMEYSDELEAIIEEDDGDGGWVDTYHNAGVAG----VAEAVKEITLD 109



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 210 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 250



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           +EESG L+  + ++        S +     +++   I++TRTYDL+ITYDKYYQTPRLWL
Sbjct: 145 YEESGLLETDEATLDTRKMVDASKTKTDVGNEDA--ILQTRTYDLYITYDKYYQTPRLWL 202

Query: 232 YGYNER 237
           +GY+E+
Sbjct: 203 FGYDEQ 208


>gi|449283923|gb|EMC90517.1| Autophagy-related protein 3, partial [Columba livia]
          Length = 277

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 185 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 244

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 245 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 277



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 73/97 (75%), Gaps = 4/97 (4%)

Query: 291 EFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI 350
           +FVAAGDHLVHHCPTWQWASG+E K K+YLP  KQFL+TKNVPC +RCKQ++Y +E++ I
Sbjct: 1   QFVAAGDHLVHHCPTWQWASGEELKVKAYLPTEKQFLVTKNVPCYKRCKQMEYSDEQEAI 60

Query: 351 IENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLDA 387
           IE +  + GWVDT H     G   A++    EI+LD+
Sbjct: 61  IEEDDGDGGWVDTFHNAGIVGATEAVK----EITLDS 93



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 188 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 228



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFLDEQDPSI--ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L+  D ++    I    ++     G+      I++TRTYDL+ITYDKYYQT
Sbjct: 120 MEEYEESGLLETDDATLDTRQIVEANKAKVDVGGEDA----ILQTRTYDLYITYDKYYQT 175

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 176 PRLWLFGYDEQ 186


>gi|149060432|gb|EDM11146.1| APG3 autophagy 3-like (S. cerevisiae), isoform CRA_b [Rattus
           norvegicus]
          Length = 158

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 86/93 (92%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 66  EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 125

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 126 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 158



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 69  QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 109



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 1   MEEYEESGLLETDEATLDTRRIVEACKAKADAGGEDA----ILQTRTYDLYITYDKYYQT 56

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 57  PRLWLFGYDEQ 67


>gi|341900189|gb|EGT56124.1| CBN-ATG-3 protein [Caenorhabditis brenneri]
          Length = 314

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 96/122 (78%), Gaps = 7/122 (5%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-D 312
            Q  +N++K  AL V E  TPVL+ESKFRETGV+TPEE+VAAGDHLVHHCPTW+W++  D
Sbjct: 3   FQGFVNNLKSAALSVGETFTPVLRESKFRETGVLTPEEYVAAGDHLVHHCPTWKWSTASD 62

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQ------DEEGWVDTHHY 366
            S+ +S+LP  KQFLIT+NVPC +RCKQ++Y E+ +KII +++      DE GWVDTHHY
Sbjct: 63  PSRVRSFLPVEKQFLITRNVPCHKRCKQMEYDEKLEKIINDDEGEYATGDESGWVDTHHY 122

Query: 367 DE 368
           ++
Sbjct: 123 EK 124



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/89 (57%), Positives = 69/89 (77%), Gaps = 1/89 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+Q YED S D++ KT+T+E+HP +    M ++HPC+HAE+MK++I    E G
Sbjct: 223 ENRRPLTVEQTYEDFSADHSNKTITVEAHPCV-DITMPTVHPCKHAEMMKRLINQYAESG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQ 97
            EL VH YL +FLKFVQ+VIPTIEYDFT+
Sbjct: 282 KELAVHEYLFLFLKFVQAVIPTIEYDFTR 310



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 5/70 (7%)

Query: 167 LDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           +D+++  ESG LDE DP+     PE     SP G +    ++ + RTYDLHI YDKYYQ 
Sbjct: 159 IDLDELLESGALDEDDPNRFVARPE-----SPTGATDGSAEVEKIRTYDLHICYDKYYQV 213

Query: 227 PRLWLYGYNE 236
           PRL+L GY+E
Sbjct: 214 PRLFLMGYDE 223



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+Q YED S D++ KT+T+E+HP +    M ++HPC+
Sbjct: 228 LTVEQTYEDFSADHSNKTITVEAHPCV-DITMPTVHPCK 265


>gi|312068352|ref|XP_003137174.1| hypothetical protein LOAG_01587 [Loa loa]
 gi|307767659|gb|EFO26893.1| hypothetical protein LOAG_01587 [Loa loa]
          Length = 314

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/140 (55%), Positives = 99/140 (70%), Gaps = 11/140 (7%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M++++NSVK  AL V +YLTPVL+ESKF+ETGV+ PEEFV AGD+L+HHCPTW W   D 
Sbjct: 1   MENIVNSVKSIALDVGQYLTPVLRESKFKETGVLNPEEFVIAGDYLIHHCPTWSWGQLDP 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIE-----------NEQDEEGWVD 362
           SKAK YLP NKQFLIT+NVPC  RC  ++Y   ++KI++           N +D+EGWVD
Sbjct: 61  SKAKPYLPINKQFLITRNVPCFSRCVDMEYDPSQEKILKSKEWNEEGDFTNVEDDEGWVD 120

Query: 363 THHYDETTGKDIAIEDKISE 382
           THHY   T +  A   +ISE
Sbjct: 121 THHYILDTTQKPASMFEISE 140



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/90 (63%), Positives = 71/90 (78%), Gaps = 1/90 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++  PLTVD+M  D SQD+  KT+TMESHP+     MASIHPCRHAEVMK++IE + E G
Sbjct: 223 ENNKPLTVDKMSADFSQDHINKTITMESHPYF-RTAMASIHPCRHAEVMKRLIEQLAESG 281

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            EL V  YL+IFLKFVQ+VIPTIEYD+T++
Sbjct: 282 KELSVDQYLLIFLKFVQAVIPTIEYDYTRS 311



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 7/68 (10%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           F   G L+E DP        +++ +   GD+    +++ TRTYDLHITYDKYYQ PRLWL
Sbjct: 166 FVAEGGLEEDDPYRF----VEENRNRTEGDTD---NVLHTRTYDLHITYDKYYQVPRLWL 218

Query: 232 YGYNERFK 239
            GY+E  K
Sbjct: 219 CGYDENNK 226



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TVD+M  D SQD+  KT+TMESHP+     MASIHPCR
Sbjct: 228 LTVDKMSADFSQDHINKTITMESHPYF-RTAMASIHPCR 265


>gi|328909201|gb|AEB61268.1| ubiquitin-like-conjugating enzyme ATG3-like protein, partial [Equus
           caballus]
          Length = 289

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 72/93 (77%), Positives = 85/93 (91%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 197 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 256

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           G LGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 257 GGLGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 289



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 85/109 (77%), Gaps = 4/109 (3%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           SKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+G+E K K+YLP  KQFL+TKNVPC +RC
Sbjct: 1   SKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRC 60

Query: 339 KQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLDA 387
           KQ++Y +E + IIE +  + GWVDT+H     G    I + + EI+L++
Sbjct: 61  KQMEYSDELEAIIEEDDGDGGWVDTYHNTGIAG----ITEAVKEITLES 105



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 200 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 240



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+IT+DKYYQT
Sbjct: 132 MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITHDKYYQT 187

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 188 PRLWLFGYDEQ 198


>gi|170592166|ref|XP_001900840.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Brugia malayi]
 gi|158591707|gb|EDP30311.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Brugia malayi]
          Length = 313

 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%), Gaps = 11/124 (8%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M+S++NSVK  AL V +YLTPVL+ESKF+ETGV+ PEEFV AGD+L+HHCPTW W   D 
Sbjct: 1   MESIVNSVKSIALDVGQYLTPVLRESKFKETGVLNPEEFVIAGDYLIHHCPTWSWGQLDP 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIE-----------NEQDEEGWVD 362
            KAK YLP NKQFLIT+NVPC  RC  ++Y   ++KI++           N +D+EGWVD
Sbjct: 61  LKAKPYLPINKQFLITRNVPCFSRCVDMEYDSSQEKILKSKEWNDEGDFTNVEDDEGWVD 120

Query: 363 THHY 366
           THHY
Sbjct: 121 THHY 124



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 1/89 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLTVD+M  D SQD+  KT+TMESHP+     MASIHPCRHAEVMK++IE + + G EL 
Sbjct: 226 PLTVDKMSADFSQDHINKTITMESHPYF-RTAMASIHPCRHAEVMKRLIEQLADSGKELS 284

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           V  YL+IFLKFVQ+VIPTIEYD+T++  +
Sbjct: 285 VDQYLLIFLKFVQAVIPTIEYDYTRSIQL 313



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 7/81 (8%)

Query: 156 TEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYD 215
           ++E +DD    +DM+ F   G L+E DP       E+++ +   GD+    +++ TRTYD
Sbjct: 149 SDEPEDDGGPPVDMDAFVAEGGLEENDP--YRFVEEERNQTE--GDTD---NVLHTRTYD 201

Query: 216 LHITYDKYYQTPRLWLYGYNE 236
           LHITYDKYYQ PRLWL GY+E
Sbjct: 202 LHITYDKYYQVPRLWLCGYDE 222



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TVD+M  D SQD+  KT+TMESHP+     MASIHPCR
Sbjct: 227 LTVDKMSADFSQDHINKTITMESHPYF-RTAMASIHPCR 264


>gi|312376631|gb|EFR23658.1| hypothetical protein AND_12481 [Anopheles darlingi]
          Length = 384

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/134 (56%), Positives = 97/134 (72%), Gaps = 5/134 (3%)

Query: 256 SVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESK 315
           +++N+V+  A        P   ESKFRETGV+TPEEF+AAGDHL HHCPTW WA GDESK
Sbjct: 108 TLVNNVQPIAFSSP---PPYDSESKFRETGVLTPEEFIAAGDHLTHHCPTWSWAIGDESK 164

Query: 316 AKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYD-ETTGKDI 374
            K YLP +KQFLIT+NVPC RRCKQI++  E+  + EN+ D  GWV+THHY+ +  G   
Sbjct: 165 IKPYLPKDKQFLITRNVPCRRRCKQIEFVGEENMVEENDPD-GGWVETHHYNADEAGGSA 223

Query: 375 AIEDKISEISLDAS 388
            +EDK+ E+ LD+S
Sbjct: 224 GLEDKVCEMKLDSS 237



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 3/77 (3%)

Query: 166 ALDMEDFEESGFLDEQDPSIANIP-PEKQSPSSPAGDSQEC-GD-IVRTRTYDLHITYDK 222
           ALDM++FEESG LD  DPS A +P P ++  ++ A  S E  GD +VRTRTYDLHITYDK
Sbjct: 268 ALDMDEFEESGLLDMVDPSNALLPAPNEKKTAAEAASSPEVEGDSVVRTRTYDLHITYDK 327

Query: 223 YYQTPRLWLYGYNERFK 239
           YYQTPRLW+ GY+E  K
Sbjct: 328 YYQTPRLWVIGYDENRK 344



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 41/44 (93%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 52
           ++R  LTV+QMY+DVSQD+AKKTVTME+HPH+PGP MAS+HPC+
Sbjct: 341 ENRKLLTVEQMYDDVSQDHAKKTVTMETHPHIPGPNMASVHPCK 384



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 48/62 (77%), Gaps = 2/62 (3%)

Query: 78  IIFLKFVQS-VIPTIEYDFTQNF-TVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHP 135
           I + K+ Q+  +  I YD  +   TV+QMY+DVSQD+AKKTVTME+HPH+PGP MAS+HP
Sbjct: 323 ITYDKYYQTPRLWVIGYDENRKLLTVEQMYDDVSQDHAKKTVTMETHPHIPGPNMASVHP 382

Query: 136 CR 137
           C+
Sbjct: 383 CK 384


>gi|260796357|ref|XP_002593171.1| hypothetical protein BRAFLDRAFT_120153 [Branchiostoma floridae]
 gi|229278395|gb|EEN49182.1| hypothetical protein BRAFLDRAFT_120153 [Branchiostoma floridae]
          Length = 1022

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 94/121 (77%), Gaps = 1/121 (0%)

Query: 266 LGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQ 325
           L VA   T    ESKF+ETGV+TPEEFVAAGDHLVHHCPTWQWA+GDESK K YLP +KQ
Sbjct: 768 LAVATSKTGHSSESKFKETGVLTPEEFVAAGDHLVHHCPTWQWAAGDESKCKPYLPKDKQ 827

Query: 326 FLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISL 385
           FLIT+NVPC +RCKQ++Y EE +K+I+ E  E GWVDTHH  + +    ++ + +SE++L
Sbjct: 828 FLITRNVPCYKRCKQMEYQEEYEKVIDEEDGEGGWVDTHHNADPSSI-TSVTETVSEMTL 886

Query: 386 D 386
           +
Sbjct: 887 E 887



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 42/43 (97%)

Query: 9    KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPC 51
            ++R PLTV+QMYED+SQD+AKKTVTME+HP+LPGPPMASIHPC
Sbjct: 980  ENRKPLTVEQMYEDISQDHAKKTVTMEAHPNLPGPPMASIHPC 1022



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/38 (84%), Positives = 37/38 (97%)

Query: 99   FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPC 136
             TV+QMYED+SQD+AKKTVTME+HP+LPGPPMASIHPC
Sbjct: 985  LTVEQMYEDISQDHAKKTVTMEAHPNLPGPPMASIHPC 1022



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           +E+SG L+ +D +  ++    +S S   G S E G I++TRTYDL+ITYDKYYQTPRLWL
Sbjct: 917 YEQSGMLEAEDNATLDVKAAVKSESPGEGASLESG-ILQTRTYDLNITYDKYYQTPRLWL 975

Query: 232 YGYNERFK 239
           +GY+E  K
Sbjct: 976 FGYDENRK 983


>gi|351694419|gb|EHA97337.1| Autophagy-related protein 3 [Heterocephalus glaber]
          Length = 106

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 74/106 (69%), Positives = 88/106 (83%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAE+LTPVLKESKF+ETGVVTPEEFVAAGDHLVHHCP  QWA+G+E
Sbjct: 1   MQNVINTVKGKALKVAEHLTPVLKESKFKETGVVTPEEFVAAGDHLVHHCPIRQWATGEE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEG 359
            K K+YLP  KQFL+TKNVPC +  KQ++Y +E + IIE   D+ G
Sbjct: 61  LKMKAYLPKGKQFLVTKNVPCYKLYKQMEYSDELEAIIEENDDDGG 106


>gi|313234424|emb|CBY24623.1| unnamed protein product [Oikopleura dioica]
          Length = 282

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/120 (60%), Positives = 89/120 (74%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           +Q+  NSVK   L VAE LTPVLK SKFRETGV+TP+EFV AGDHLV  CPTW+W SG+ 
Sbjct: 3   LQNAWNSVKSVGLDVAESLTPVLKTSKFRETGVLTPDEFVFAGDHLVSTCPTWKWGSGES 62

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K YLP +KQFLITK+VPC RRCK I+Y    +K++++E  + GWVDTHH + T   D
Sbjct: 63  DKLKPYLPKDKQFLITKSVPCHRRCKDIEYNNAFEKLVDDEDGDGGWVDTHHGEVTENVD 122



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 57/98 (58%), Positives = 74/98 (75%), Gaps = 5/98 (5%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII 61
           G N +G+    PL  D+++ED+SQ++A KTVT E H  L      S+HPCRHAEVMKK+I
Sbjct: 188 GYNEEGL----PLNKDRIFEDLSQEHANKTVTFEQHSSL-NSQQCSVHPCRHAEVMKKLI 242

Query: 62  ETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           +TV EGG  L VH Y++IFLKF+Q+VIPTIEYDFT++F
Sbjct: 243 QTVQEGGRVLEVHEYILIFLKFIQAVIPTIEYDFTKSF 280



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 18/77 (23%)

Query: 160 DDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHIT 219
           D+ D+EALDMED      L+++D  +         P     DS     I +TRTYDL IT
Sbjct: 133 DESDDEALDMEDMN----LEDEDLVV---------PVQRMDDS-----IKKTRTYDLSIT 174

Query: 220 YDKYYQTPRLWLYGYNE 236
           YDKYYQTPRLWL GYNE
Sbjct: 175 YDKYYQTPRLWLTGYNE 191



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           D+++ED+SQ++A KTVT E H  L      S+HPCR
Sbjct: 199 DRIFEDLSQEHANKTVTFEQHSSL-NSQQCSVHPCR 233


>gi|449666814|ref|XP_002162047.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Hydra
           magnipapillata]
          Length = 283

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 69/93 (74%), Positives = 84/93 (90%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PLT++QMYED+SQD+  KTVT E+HPHLP P MASIHPC+HAEVMKKII TV +GG
Sbjct: 191 ESRKPLTIEQMYEDISQDHVNKTVTCEAHPHLPPPQMASIHPCKHAEVMKKIISTVQDGG 250

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GE+GVHMYL+IFLKFVQ+VIPTIEYD+T+N ++
Sbjct: 251 GEVGVHMYLLIFLKFVQAVIPTIEYDYTRNISM 283



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 78/127 (61%), Gaps = 23/127 (18%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           +Q   N+VK  ALG+AE LTP+LKESKF ETGV+TPEEFVAAGD+LVHHCPTW W     
Sbjct: 3   LQHAYNTVKSKALGMAESLTPILKESKFSETGVITPEEFVAAGDYLVHHCPTWHW----- 57

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
                             +PC +RC Q++Y  E + +IE    + GWVDTHH  E   KD
Sbjct: 58  ------------------LPCYKRCSQMEYMLENEAVIEEHDGDGGWVDTHHNLEHANKD 99

Query: 374 IAIEDKI 380
           I  +++I
Sbjct: 100 IKDDEEI 106



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           FEESG L++   +I+++  + +     A  ++    I++TRTYDL+ITYD+YYQTPR WL
Sbjct: 129 FEESGMLEDDSATISSVIHKNKDMIQEAVSTK--NGILQTRTYDLNITYDRYYQTPRFWL 186

Query: 232 YGYNERFK 239
           +GY+E  K
Sbjct: 187 FGYDESRK 194



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 33/39 (84%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T++QMYED+SQD+  KTVT E+HPHLP P MASIHPC+
Sbjct: 196 LTIEQMYEDISQDHVNKTVTCEAHPHLPPPQMASIHPCK 234


>gi|340380977|ref|XP_003388998.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like [Amphimedon
           queenslandica]
          Length = 319

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 86/111 (77%), Gaps = 3/111 (2%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           ++ VK +A+ VA  LTPVLK SKFRE+G++TP+EFVAAGD LV+HCPTWQW SG+ S+ K
Sbjct: 10  VSRVKQSAISVAGELTPVLKNSKFRESGMITPDEFVAAGDQLVYHCPTWQWESGEASRRK 69

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQD---EEGWVDTHH 365
           SYLP  KQFL+T+ VPC RRC Q+    E +K+I+  QD   +EGWVDTHH
Sbjct: 70  SYLPNGKQFLVTRKVPCYRRCHQMSVLPENEKVIKLNQDDAEDEGWVDTHH 120



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/89 (69%), Positives = 73/89 (82%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT DQMYED+SQD+  KTVTME HPHLP PP AS+HPCRHAE+MKKI+  V E G EL 
Sbjct: 228 PLTEDQMYEDISQDHLNKTVTMEQHPHLPPPPRASVHPCRHAELMKKIMSMVEEDGRELE 287

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH YL++FLKFVQ+VIPTIEYD+T   ++
Sbjct: 288 VHAYLLVFLKFVQAVIPTIEYDYTHQLSL 316



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 32/39 (82%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T DQMYED+SQD+  KTVTME HPHLP PP AS+HPCR
Sbjct: 229 LTEDQMYEDISQDHLNKTVTMEQHPHLPPPPRASVHPCR 267



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 32/42 (76%)

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           P    Q+   +++TRTYDL+ITYD YY+TPRLWL+GY+E  K
Sbjct: 186 PVTKKQDESVVLQTRTYDLNITYDNYYRTPRLWLFGYDENGK 227


>gi|256085399|ref|XP_002578909.1| autophagocytosis protein aut1-related [Schistosoma mansoni]
 gi|360045540|emb|CCD83088.1| autophagocytosis protein aut1-related [Schistosoma mansoni]
          Length = 327

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/114 (65%), Positives = 94/114 (82%), Gaps = 2/114 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M SV   V  TALG+AEY+TP+LKESKFRETGV+TPEEFVAAGD LV+HCPTWQWA+GD+
Sbjct: 1   MDSVRQVVTRTALGLAEYVTPILKESKFRETGVITPEEFVAAGDFLVYHCPTWQWATGDK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQI-DYCEEKQKIIENEQDEEGWVDTHHY 366
             A+SYLP  KQ+LIT++VPC +R KQ+ D+ EE ++++E E  + GWVDTHHY
Sbjct: 61  G-ARSYLPKEKQYLITRSVPCYKRVKQMADHNEEFEEVLEEEDGDGGWVDTHHY 113



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/89 (69%), Positives = 74/89 (83%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT  +MYED SQD+A+KTVT ESHPHL G  M SIHPCR A+VM+K+IE V +GG EL 
Sbjct: 235 PLTEAEMYEDFSQDHARKTVTTESHPHLSGHMMPSIHPCRQADVMRKLIEAVADGGAELA 294

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH YL+IFLKFVQ+VIPTIEYD+T+NF +
Sbjct: 295 VHQYLMIFLKFVQAVIPTIEYDYTRNFNL 323



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 9/74 (12%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSP-----AGDSQ----ECGDIVRTRTYDLHITYDK 222
           F +SG LDE DP+  +   +    SS       G  Q    E   I++ RTYDL+ITYDK
Sbjct: 158 FLQSGMLDECDPAAVSARTKVLKTSSTNQTLHFGVDQKANCENSGILQLRTYDLYITYDK 217

Query: 223 YYQTPRLWLYGYNE 236
           YYQTPRLWLYGY+E
Sbjct: 218 YYQTPRLWLYGYDE 231



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  T  +MYED SQD+A+KTVT ESHPHL G  M SIHPCR
Sbjct: 234 QPLTEAEMYEDFSQDHARKTVTTESHPHLSGHMMPSIHPCR 274


>gi|324509384|gb|ADY43951.1| Ubiquitin-like-conjugating enzyme ATG3 [Ascaris suum]
          Length = 318

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 92/124 (74%), Gaps = 11/124 (8%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGD 312
           M +++ ++K  AL V E LTP+L+ESKF+ETGV+TPEEF+ AGDHLVHHCPTW WA + D
Sbjct: 5   MDALVKTMKSAALNVGEMLTPILRESKFKETGVLTPEEFIIAGDHLVHHCPTWSWAKAAD 64

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQ----------DEEGWVD 362
            S+ K+YLP +KQFLIT+NVPC RRC ++DY   ++K++ N +          D+ GWVD
Sbjct: 65  ASRTKTYLPDDKQFLITRNVPCYRRCIEMDYDPTQEKVLTNAEMGVEGFDGADDDGGWVD 124

Query: 363 THHY 366
           THH+
Sbjct: 125 THHF 128



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 76/93 (81%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +++ PL+V++M ED SQD+A KT+T+E+HPHL    MASIHPCRHAEVMK++IE + E G
Sbjct: 226 EAKKPLSVEKMNEDFSQDHANKTITIETHPHLHNTQMASIHPCRHAEVMKRLIEQLAESG 285

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            EL V  YL+IFLKFVQ+VIPTIEYD+T++  +
Sbjct: 286 KELTVEHYLLIFLKFVQAVIPTIEYDYTRSIQL 318



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 14/98 (14%)

Query: 149 SCNKPNSTEEE-------DDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGD 201
           S ++P +TE E        DDD  A+DME F +SG L++ DP+     P  +      GD
Sbjct: 139 SMDEPATTEPEVATGNASADDDGPAMDMESFIDSGGLEQDDPN--RFIPTNRVICGSQGD 196

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           +     I+ TRTYDLHITYDKYYQ PRLWL GY+E  K
Sbjct: 197 T-----IIHTRTYDLHITYDKYYQVPRLWLSGYDEAKK 229



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 31/39 (79%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +V++M ED SQD+A KT+T+E+HPHL    MASIHPCR
Sbjct: 231 LSVEKMNEDFSQDHANKTITIETHPHLHNTQMASIHPCR 269


>gi|351700649|gb|EHB03568.1| Autophagy-related protein 3 [Heterocephalus glaber]
          Length = 227

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/93 (72%), Positives = 82/93 (88%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PL V+ +YED+SQD+ KKTVT E+HPHLP  PM S+HPCRHA+V+KKIIETV EG 
Sbjct: 135 EQRQPLRVEHVYEDISQDHVKKTVTTENHPHLPPSPMCSVHPCRHADVIKKIIETVEEGR 194

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GELGVHMYL+IFLKFVQ+VIPTIEYD+T++FT+
Sbjct: 195 GELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM 227



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFLDEQDPSI--ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME +EESGFL+  + +I    I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 70  MEGYEESGFLETDEATIDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 125

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 126 PRLWLFGYDEQ 136



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/41 (63%), Positives = 32/41 (78%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q   V+ +YED+SQD+ KKTVT E+HPHLP  PM S+HPCR
Sbjct: 138 QPLRVEHVYEDISQDHVKKTVTTENHPHLPPSPMCSVHPCR 178


>gi|390360490|ref|XP_787148.3| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like
           [Strongylocentrotus purpuratus]
          Length = 241

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/92 (73%), Positives = 84/92 (91%), Gaps = 1/92 (1%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLTV+QMYED+SQD+ KKTVT+ESHP+LP   M S+HPCRHA+VMKKII TV +GGGE
Sbjct: 146 RKPLTVEQMYEDISQDHVKKTVTVESHPNLP-QTMCSVHPCRHADVMKKIIHTVQDGGGE 204

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           LGVH+YL+IFLKFVQ+VIPTIEYD+T++FT++
Sbjct: 205 LGVHLYLLIFLKFVQAVIPTIEYDYTRHFTMN 236



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/79 (74%), Positives = 70/79 (88%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ++INSVKG  LGVAE+LTP+LKESKF+ETGV+TP+EFVAAGDHLVH CPTW W++G+ 
Sbjct: 1   MQNMINSVKGMGLGVAEFLTPILKESKFKETGVLTPDEFVAAGDHLVHSCPTWSWSAGEP 60

Query: 314 SKAKSYLPPNKQFLITKNV 332
           SK KSYLP  KQFL+TKN 
Sbjct: 61  SKKKSYLPDEKQFLLTKNA 79



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 6/82 (7%)

Query: 161 DDDEEALDMEDFEESGFLDEQDPSI---ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLH 217
           D+ +  L    FEESG L+ +D +    +N+P    S S  AG S E G I++TRTYDL+
Sbjct: 69  DEKQFLLTKNAFEESGMLEAEDNATLDTSNLPGTGASES--AGASGESG-ILQTRTYDLN 125

Query: 218 ITYDKYYQTPRLWLYGYNERFK 239
           ITYDKYYQTPRLWL+GY+E  K
Sbjct: 126 ITYDKYYQTPRLWLFGYDEHRK 147



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 33/39 (84%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV+QMYED+SQD+ KKTVT+ESHP+LP   M S+HPCR
Sbjct: 149 LTVEQMYEDISQDHVKKTVTVESHPNLP-QTMCSVHPCR 186


>gi|358334521|dbj|GAA27905.2| autophagy-related protein 3 [Clonorchis sinensis]
          Length = 309

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 78/149 (52%), Positives = 97/149 (65%), Gaps = 9/149 (6%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M S+  +V  TALG+AEY+ PVL+ SKF+ETGV+TPEEFVAAGD LVHHCPTWQW +GD+
Sbjct: 1   MDSIRQAVTRTALGLAEYVVPVLRTSKFKETGVITPEEFVAAGDFLVHHCPTWQWMTGDK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
              + YLP  KQ+L+T+NVPC +R KQ+D   E  +    E  E GWVDTHHY     +D
Sbjct: 61  P-PRDYLPVAKQYLLTRNVPCYKRVKQVDNHNEDLE----ETVEGGWVDTHHYASAYTED 115

Query: 374 IAIEDKISEISLDASTGWVDTHHYDETTG 402
               DK +E+  D   G   TH  D   G
Sbjct: 116 T---DKPAEMPTD-QRGIASTHIGDNAVG 140



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/89 (70%), Positives = 75/89 (84%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT D+MYED SQD+AKKTVTME +PHL GPPM SIHPCR A+VMKK+I  V +GG EL 
Sbjct: 220 PLTADEMYEDFSQDHAKKTVTMEQNPHLSGPPMPSIHPCRQADVMKKLIAIVADGGAELA 279

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH Y+++FLKFVQ+VIPTIEYD+T NF +
Sbjct: 280 VHQYMMVFLKFVQAVIPTIEYDYTHNFNM 308



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 5/65 (7%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           F + G LDE DP   ++ P      + A D      IV TRTYDL+ITYDKYYQTPR+WL
Sbjct: 157 FMQRGMLDEVDP--VSVCPSITKSHNLASDPDT---IVSTRTYDLYITYDKYYQTPRMWL 211

Query: 232 YGYNE 236
           YGYNE
Sbjct: 212 YGYNE 216



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 33/39 (84%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T D+MYED SQD+AKKTVTME +PHL GPPM SIHPCR
Sbjct: 221 LTADEMYEDFSQDHAKKTVTMEQNPHLSGPPMPSIHPCR 259


>gi|432110114|gb|ELK33893.1| Ubiquitin-like-conjugating enzyme ATG3 [Myotis davidii]
          Length = 200

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 88/120 (73%), Gaps = 4/120 (3%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           V EYLT VLKES  +ETGV+TPEEFVAAGDHLVHHCPTWQWA G+E K K+YLP  K FL
Sbjct: 3   VVEYLTRVLKESTCKETGVITPEEFVAAGDHLVHHCPTWQWAIGEELKVKAYLPTGKLFL 62

Query: 328 ITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLDA 387
           +TKNVP  ++CKQ++Y +E + +IE +  + GWVDT+H    T     I   + EI+L++
Sbjct: 63  VTKNVPYYKQCKQMEYSDEFEAVIEEDDGDGGWVDTYHNTGIT----RITKAVKEITLES 118



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)

Query: 172 FEESGFLDEQDPSI-ANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           +EESG L+  + ++      E +   + AG       I++TRTYDL+ITYDK YQTP
Sbjct: 148 YEESGLLETDEATLDTRKIGEARKAKTDAGSEDA---ILQTRTYDLYITYDK-YQTP 200


>gi|56753163|gb|AAW24791.1| SJCHGC06107 protein [Schistosoma japonicum]
 gi|226472954|emb|CAX71163.1| autophagy-related protein 3 [Schistosoma japonicum]
          Length = 333

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 100/133 (75%), Gaps = 2/133 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M +V  +V  TALG+AEY+TPVLK +KFRETGV+TPEEFVAAGD LV+HCPTWQW+ GD+
Sbjct: 1   MDTVRQAVTRTALGLAEYVTPVLKATKFRETGVITPEEFVAAGDFLVYHCPTWQWSIGDK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQI-DYCEEKQKIIENEQDEEGWVDTHHYDETTGK 372
             A+ YLP  KQ+L+T++VPC +R KQ+ D+ EE +K++E E  + GWVDTHHY    G 
Sbjct: 61  P-ARPYLPKEKQYLVTRSVPCYKRVKQMADHHEEFEKVLEEEDGDGGWVDTHHYATKYGD 119

Query: 373 DIAIEDKISEISL 385
                +K +E+S+
Sbjct: 120 LNPEVEKTNEMSV 132



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 73/89 (82%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT  QMYED SQD+AKKTVT E+HPHL G  M SIHPCR A+VM+K+IE V + G EL 
Sbjct: 241 PLTETQMYEDFSQDHAKKTVTTEAHPHLSGHMMPSIHPCRQADVMRKLIEAVADNGAELA 300

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH YL++FLKFVQ+VIPTIEYD+T+NF +
Sbjct: 301 VHQYLMVFLKFVQAVIPTIEYDYTRNFNL 329



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 10/76 (13%)

Query: 172 FEESGFLDEQDPS-------IANIPPEKQSPSSPAGDS---QECGDIVRTRTYDLHITYD 221
           F +SG LDE DP+       +AN     Q+ +    D    +E   I++TRTYDL+ITYD
Sbjct: 163 FLQSGMLDECDPAAVKARTKVANDGNTSQAMADFGIDQNIDRENNGILQTRTYDLYITYD 222

Query: 222 KYYQTPRLWLYGYNER 237
           KYYQTPRLWL+GY+E+
Sbjct: 223 KYYQTPRLWLFGYDEQ 238



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 31/41 (75%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  T  QMYED SQD+AKKTVT E+HPHL G  M SIHPCR
Sbjct: 240 QPLTETQMYEDFSQDHAKKTVTTEAHPHLSGHMMPSIHPCR 280


>gi|226472956|emb|CAX71164.1| autophagy-related protein 3 [Schistosoma japonicum]
          Length = 333

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 93/119 (78%), Gaps = 2/119 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M +V  +V  TALG+AEY+TPVLK +KFRETGV+TPEEFVAAGD LV+HCPTWQW+ GD+
Sbjct: 1   MDTVRQAVTRTALGLAEYVTPVLKATKFRETGVITPEEFVAAGDFLVYHCPTWQWSIGDK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQI-DYCEEKQKIIENEQDEEGWVDTHHYDETTG 371
             A+ YLP  KQ+L+T++VPC +R KQ+ D+ EE +K++E E  + GWVDTHHY    G
Sbjct: 61  P-ARPYLPKEKQYLVTRSVPCYKRVKQMADHNEEFEKVLEEEDGDGGWVDTHHYATKYG 118



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/89 (67%), Positives = 73/89 (82%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT  +MYED SQD+AKKTVT E+HPHL G  M SIHPCR A+VM+K+IE V + G EL 
Sbjct: 241 PLTETEMYEDFSQDHAKKTVTTEAHPHLSGHMMPSIHPCRQADVMRKLIEAVADNGAELA 300

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH YL++FLKFVQ+VIPTIEYD+T+NF +
Sbjct: 301 VHQYLMVFLKFVQAVIPTIEYDYTRNFNL 329



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 10/76 (13%)

Query: 172 FEESGFLDEQDPS-------IANIPPEKQSPSSPAGDS---QECGDIVRTRTYDLHITYD 221
           F +SG LDE DP+       ++N     Q+ +    D    +E   I++TRTYDL+ITYD
Sbjct: 163 FLQSGMLDECDPAAVKARTKVSNEGNTSQAMADFGVDQNIDRENNGILQTRTYDLYITYD 222

Query: 222 KYYQTPRLWLYGYNER 237
           KYYQTPRLWL+GY+E+
Sbjct: 223 KYYQTPRLWLFGYDEQ 238



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  T  +MYED SQD+AKKTVT E+HPHL G  M SIHPCR
Sbjct: 240 QPLTETEMYEDFSQDHAKKTVTTEAHPHLSGHMMPSIHPCR 280


>gi|226469546|emb|CAX76603.1| autophagy-related protein 3 [Schistosoma japonicum]
          Length = 333

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 99/133 (74%), Gaps = 2/133 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M +V  +V  TALG+AEY+TPVLK +KFRETGV+TPEEFVAAGD LV+HCPTWQW+ GD+
Sbjct: 1   MDTVRQAVTRTALGLAEYVTPVLKATKFRETGVITPEEFVAAGDFLVYHCPTWQWSIGDK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQI-DYCEEKQKIIENEQDEEGWVDTHHYDETTGK 372
             A+ YLP  KQ+L+T++VPC +R KQ+ D+ EE +K++E E  + GW DTHHY    G 
Sbjct: 61  P-ARPYLPKEKQYLVTRSVPCYKRVKQMADHHEEFEKVLEEEDGDGGWADTHHYATKYGD 119

Query: 373 DIAIEDKISEISL 385
                +K +E+S+
Sbjct: 120 LNPEVEKTNEMSV 132



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 73/89 (82%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT  QMYED SQD+AKKTVT E+HPHL G  M SIHPCR A+VM+K+IE V + G EL 
Sbjct: 241 PLTETQMYEDFSQDHAKKTVTTEAHPHLSGHVMPSIHPCRQADVMRKLIEAVADNGAELA 300

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH YL++FLKFVQ+VIPTIEYD+T+NF +
Sbjct: 301 VHQYLMVFLKFVQAVIPTIEYDYTRNFNL 329



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 10/76 (13%)

Query: 172 FEESGFLDEQDPS-------IANIPPEKQSPSSPAGDS---QECGDIVRTRTYDLHITYD 221
           F +SG LDE DP+       +AN     Q+ +    D    +E   I++TRTYDL+ITYD
Sbjct: 163 FLQSGMLDECDPAAVKARTKVANDGNTSQAMADFGIDQNIDRENNGILQTRTYDLYITYD 222

Query: 222 KYYQTPRLWLYGYNER 237
           KYYQTPRLWL+GY+E+
Sbjct: 223 KYYQTPRLWLFGYDEQ 238



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 31/41 (75%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  T  QMYED SQD+AKKTVT E+HPHL G  M SIHPCR
Sbjct: 240 QPLTETQMYEDFSQDHAKKTVTTEAHPHLSGHVMPSIHPCR 280


>gi|320166361|gb|EFW43260.1| autophagy protein ATG3 [Capsaspora owczarzaki ATCC 30864]
          Length = 223

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/92 (70%), Positives = 77/92 (83%), Gaps = 1/92 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL+V +MYED SQD+AKKTVTME+HP+L    MASIHPCRH+ VMKKII  V   G
Sbjct: 132 ESRKPLSVTKMYEDFSQDHAKKTVTMEAHPNL-SITMASIHPCRHSNVMKKIISNVEVAG 190

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFT 100
            ELGVH+YL+IFLKFVQSVIPTIEYD+T+ F+
Sbjct: 191 KELGVHLYLMIFLKFVQSVIPTIEYDYTREFS 222



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 31/102 (30%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK---------------GKENLVLIS--- 248
           +I+RTRTYDL+ITYDKYYQTPRLWL+G++E  K                K+ + + +   
Sbjct: 103 NILRTRTYDLYITYDKYYQTPRLWLFGHDESRKPLSVTKMYEDFSQDHAKKTVTMEAHPN 162

Query: 249 -----------KWCNRMQSVINSVK--GTALGVAEYLTPVLK 277
                      +  N M+ +I++V+  G  LGV  YL   LK
Sbjct: 163 LSITMASIHPCRHSNVMKKIISNVEVAGKELGVHLYLMIFLK 204



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            +V +MYED SQD+AKKTVTME+HP+L    MASIHPCR
Sbjct: 137 LSVTKMYEDFSQDHAKKTVTMEAHPNL-SITMASIHPCR 174


>gi|47226782|emb|CAG06624.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 135

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 91/132 (68%), Gaps = 19/132 (14%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+++N VKGTALGVAE+LTPVLKESKF+ETGV+TPEE                 A+G+E
Sbjct: 1   MQNMLNIVKGTALGVAEFLTPVLKESKFKETGVITPEEV----------------AAGEE 44

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
            K K YLP +KQFL+T+NVPC +RCKQ++Y +E + IIE +  + GWVDT+H    +G+ 
Sbjct: 45  VKIKPYLPEDKQFLLTRNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYH---NSGRK 101

Query: 374 IAIEDKISEISL 385
           +A+   + +  L
Sbjct: 102 MALRGFLEQSKL 113


>gi|384493921|gb|EIE84412.1| autophagocytosis protein [Rhizopus delemar RA 99-880]
          Length = 308

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/114 (53%), Positives = 76/114 (66%), Gaps = 3/114 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           +Q   N V      V +YL PVLK SKF+ETG +TPEEFVAAGD LV+ CPTW W  G E
Sbjct: 3   VQDAYNKVFSNFQRVRDYLAPVLKNSKFKETGCITPEEFVAAGDFLVYKCPTWSWEGGLE 62

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCE---EKQKIIENEQDEEGWVDTH 364
            K + YLP +KQFL+T+NVPC RR +Q++Y E   E Q   +N +D E W+ TH
Sbjct: 63  EKKRDYLPADKQFLVTRNVPCLRRARQMEYTEDDLETQIADDNNEDGEDWMYTH 116



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/89 (62%), Positives = 67/89 (75%), Gaps = 4/89 (4%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PLT  Q++EDVSQDY KKTVT+E+HPHL    +ASIHPC+HAEVMKKIIE +     E
Sbjct: 218 RRPLTSTQVFEDVSQDYVKKTVTIETHPHL-SLNLASIHPCKHAEVMKKIIERMSNKEDE 276

Query: 71  ---LGVHMYLIIFLKFVQSVIPTIEYDFT 96
              + V  YLIIFLKF+ SV+PTI+YD T
Sbjct: 277 ESAIRVDQYLIIFLKFLSSVVPTIDYDHT 305



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 7/75 (9%)

Query: 165 EALDME---DFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYD 221
           E LD++   D ++   +DE    I ++  + Q    PA +      +++ RTYD+ ITYD
Sbjct: 146 EKLDLDKIPDLDDIPNMDE----IPDMDDQVQEEDDPAVEHNTNEKVLQVRTYDVFITYD 201

Query: 222 KYYQTPRLWLYGYNE 236
           KYYQTPR+WL+GY+E
Sbjct: 202 KYYQTPRMWLFGYDE 216



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T  Q++EDVSQDY KKTVT+E+HPHL    +ASIHPC+
Sbjct: 221 LTSTQVFEDVSQDYVKKTVTIETHPHL-SLNLASIHPCK 258


>gi|349804967|gb|AEQ17956.1| putative ubiquitin-like-conjugating enzyme atg3 [Hymenochirus
           curtipes]
          Length = 74

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/74 (75%), Positives = 69/74 (93%)

Query: 273 TPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNV 332
           TPVLKESKF+ETGV+TPEEF+AAG HLVHHCPTWQW++G++SK K YLPP+KQFL+TKNV
Sbjct: 1   TPVLKESKFKETGVITPEEFLAAGVHLVHHCPTWQWSAGEDSKIKPYLPPDKQFLMTKNV 60

Query: 333 PCPRRCKQIDYCEE 346
           PC +RCKQ++Y +E
Sbjct: 61  PCYKRCKQMEYSDE 74


>gi|402581229|gb|EJW75177.1| hypothetical protein WUBG_13912 [Wuchereria bancrofti]
          Length = 82

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/81 (70%), Positives = 67/81 (82%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M+S++NSVK  AL V +YLTPVL+ESKF+ETGV+ PEEFV AGD+L+HHCPTW W   D 
Sbjct: 1   MESIVNSVKSIALDVGQYLTPVLRESKFKETGVLNPEEFVIAGDYLIHHCPTWSWGQLDP 60

Query: 314 SKAKSYLPPNKQFLITKNVPC 334
            KAK YLP NKQFLIT+NVPC
Sbjct: 61  LKAKPYLPINKQFLITRNVPC 81


>gi|198417698|ref|XP_002121723.1| PREDICTED: similar to GK12099, partial [Ciona intestinalis]
          Length = 78

 Score =  130 bits (326), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/78 (74%), Positives = 70/78 (89%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+V NSVK +ALGVAE LTPVLKESKF+ETGV+TPEEFV AGD LVHHCPTWQW +GD+
Sbjct: 1   MQNVFNSVKSSALGVAELLTPVLKESKFKETGVLTPEEFVIAGDFLVHHCPTWQWLAGDK 60

Query: 314 SKAKSYLPPNKQFLITKN 331
           +K K+YLP +KQ+L+T+N
Sbjct: 61  TKTKAYLPQDKQYLMTRN 78


>gi|301102722|ref|XP_002900448.1| autophagocytosis associated protein, putative [Phytophthora
           infestans T30-4]
 gi|262102189|gb|EEY60241.1| autophagocytosis associated protein, putative [Phytophthora
           infestans T30-4]
          Length = 303

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 80/122 (65%), Gaps = 6/122 (4%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           GV EYLTPVL ES F + G++TPEEFV AGD LV+ CPTW+W SGD S  +SYLP +KQF
Sbjct: 7   GVREYLTPVLTESSFEDKGLLTPEEFVKAGDLLVYKCPTWRWESGDPSMRRSYLPADKQF 66

Query: 327 LITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAI---EDKISEI 383
           LIT+NVPC RR   ++   + ++ +E    EEGWV    Y    G   A+    D++ EI
Sbjct: 67  LITRNVPCRRRVTSLEQSYQTEEAVEG---EEGWVAASSYATEGGSSNAVTDLSDEMGEI 123

Query: 384 SL 385
           SL
Sbjct: 124 SL 125



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 11/96 (11%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII---------- 61
           APL+ DQ++ED+ QDYA +TVTME HPH      ASIHPC+H  VMK+II          
Sbjct: 201 APLSGDQLFEDIMQDYANRTVTMEPHPHRSALVHASIHPCQHGAVMKRIIANLKMRQPGE 260

Query: 62  -ETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
            ET  +   E+    YL +FLKF+QSVIPTI+YD+T
Sbjct: 261 TETEEQAANEIRSDQYLFLFLKFIQSVIPTIDYDYT 296



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 163 DEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDK 222
           D E  D+  +EE   L E D +           +S   D++    I+RTRTYDL ITYDK
Sbjct: 127 DPELRDLSSYEEEDNLVEDDEAALGPSTSSYLVASEPDDAEVA--ILRTRTYDLSITYDK 184

Query: 223 YYQTPRLWLYGYNER 237
           YYQTPR+WL+GY+ER
Sbjct: 185 YYQTPRVWLFGYDER 199



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 5/62 (8%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQTQSCNKPNSTEE 158
           DQ++ED+ QDYA +TVTME HPH      ASIHPC+    +K   +N      +P  TE 
Sbjct: 206 DQLFEDIMQDYANRTVTMEPHPHRSALVHASIHPCQHGAVMKRIIAN--LKMRQPGETET 263

Query: 159 ED 160
           E+
Sbjct: 264 EE 265


>gi|119600076|gb|EAW79670.1| ATG3 autophagy related 3 homolog (S. cerevisiae), isoform CRA_c
           [Homo sapiens]
          Length = 224

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 70/85 (82%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 135 EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 194

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEY 93
           GELGVHMY  ++++ V   + TI +
Sbjct: 195 GELGVHMYPSLYVRLVAKWLLTIFF 219



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 138 QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 178



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 70  MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 125

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 126 PRLWLFGYDEQ 136


>gi|358054241|dbj|GAA99167.1| hypothetical protein E5Q_05859 [Mixia osmundae IAM 14324]
          Length = 399

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 81/120 (67%), Gaps = 9/120 (7%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQS+ NS++       +YL+PVL+ES+FRE G +TP EFVAAGD L +  PTWQWA GD+
Sbjct: 1   MQSIHNSIQTQFWLARDYLSPVLRESRFREHGQITPAEFVAAGDFLTYKFPTWQWAPGDK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI-------IENEQDEEG--WVDTH 364
           SK + +LP +KQFLI+++VPC RRC Q+ Y +  +         ++ EQ EEG  WV TH
Sbjct: 61  SKQRDFLPDDKQFLISRSVPCLRRCSQMVYTDADEDAEALMRFDLDGEQGEEGDEWVATH 120



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 38/46 (82%)

Query: 19  MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV 64
           +++D+S DYA+KTVT+E  PHL G  MAS+HPC+HA VMKK+I+ +
Sbjct: 262 VFQDISTDYAQKTVTIEPFPHLSGISMASVHPCKHANVMKKVIDRM 307



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 16/86 (18%)

Query: 153 PNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD--IVR 210
           P+  EEEDD    ALD       G  + +D +       +Q  +SP  ++   G+  ++ 
Sbjct: 181 PDMDEEEDD----ALDA-----GGMTEAEDTAAV-----RQEVASPTDETASKGNDNLLS 226

Query: 211 TRTYDLHITYDKYYQTPRLWLYGYNE 236
            RTYD +ITYDKYYQTPR+WL G++E
Sbjct: 227 VRTYDCYITYDKYYQTPRMWLNGFDE 252



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           +++D+S DYA+KTVT+E  PHL G  MAS+HPC+
Sbjct: 262 VFQDISTDYAQKTVTIEPFPHLSGISMASVHPCK 295


>gi|10438397|dbj|BAB15237.1| unnamed protein product [Homo sapiens]
          Length = 155

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 70/85 (82%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 66  EQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 125

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEY 93
           GELGVHMY  ++++ V   + TI +
Sbjct: 126 GELGVHMYPSLYVRLVAKWLLTIFF 150



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PPM S+HPCR
Sbjct: 69  QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCR 109



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)

Query: 169 MEDFEESGFL--DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQT 226
           ME++EESG L  DE       I    ++ +   G+      I++TRTYDL+ITYDKYYQT
Sbjct: 1   MEEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDA----ILQTRTYDLYITYDKYYQT 56

Query: 227 PRLWLYGYNER 237
           PRLWL+GY+E+
Sbjct: 57  PRLWLFGYDEQ 67


>gi|444719191|gb|ELW59989.1| Ubiquitin-like-conjugating enzyme ATG3 [Tupaia chinensis]
          Length = 249

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 54/68 (79%), Positives = 60/68 (88%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R PLTV+ MYED+SQD+ KKTVT+E HPHLP PPM S+HPCRHAEVMKKIIETV EGG
Sbjct: 177 EQRQPLTVEHMYEDISQDHVKKTVTIEKHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGG 236

Query: 69  GELGVHMY 76
           GELGVHMY
Sbjct: 237 GELGVHMY 244



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 49/134 (36%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQ+VIN+VKG AL VAEYLTPVLKESKF+ETGV+TPEE                      
Sbjct: 1   MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEE---------------------- 38

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
                                  RCKQ++Y +E + IIE +  + GWVDT+H    TG  
Sbjct: 39  -----------------------RCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITG-- 73

Query: 374 IAIEDKISEISLDA 387
             + + + EI+L++
Sbjct: 74  --VTEAVKEITLES 85



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 7/101 (6%)

Query: 139 IKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFL--DEQDPSIANIPPEKQSPS 196
           ++SK S + Q C+ P   EEE++D+ EA DME++EESG L  DE       I    ++ +
Sbjct: 83  LESKDSIKLQDCSAP-CEEEEEEDEGEAADMEEYEESGLLETDEATLDTRKIVEACKAKT 141

Query: 197 SPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNER 237
              G+      I +TRTYDL+ITYDKYYQTPRLWL+GY+E+
Sbjct: 142 DAGGEDA----IFKTRTYDLYITYDKYYQTPRLWLFGYDEQ 178



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 34/41 (82%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQD+ KKTVT+E HPHLP PPM S+HPCR
Sbjct: 180 QPLTVEHMYEDISQDHVKKTVTIEKHPHLPPPPMCSVHPCR 220


>gi|348671984|gb|EGZ11804.1| hypothetical protein PHYSODRAFT_317232 [Phytophthora sojae]
          Length = 341

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 8/124 (6%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           GV EYLTPVL ES F + G++TPEEFV AGD LV+ CPTW+W SG+ S  +SYLP +KQF
Sbjct: 7   GVREYLTPVLTESSFEDKGLLTPEEFVKAGDLLVYKCPTWRWESGEPSLRRSYLPADKQF 66

Query: 327 LITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIA-----IEDKIS 381
           L+T+NVPC RR   +D   + ++ +E E +   WV    Y    G   A     + D++ 
Sbjct: 67  LVTRNVPCRRRVTSLDQSYQTEEAVEGEDE---WVAASSYANNEGGAGADAVTDLSDEMG 123

Query: 382 EISL 385
           +ISL
Sbjct: 124 DISL 127



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 11/96 (11%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII---------- 61
           APL+ DQM+ED+ QDYA +TVTME HPH      ASIHPC+H  VMK+II          
Sbjct: 239 APLSGDQMFEDIMQDYANRTVTMEPHPHRSSLVHASIHPCQHGAVMKRIIANLKARKPGD 298

Query: 62  -ETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
            ET  +   E+    YL +FLKF+QSVIPTI+YD+T
Sbjct: 299 KETEEQLANEIRSDQYLFLFLKFIQSVIPTIDYDYT 334



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 165 EALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYY 224
           E  D+  +EE   L E D +           +S   D+ +   I+RTRTYDL ITYDKYY
Sbjct: 167 ELRDLSSYEEEDNLVEDDEAALGPAAGSYLVASEPDDADDA--ILRTRTYDLSITYDKYY 224

Query: 225 QTPRLWLYGYNER 237
           QTPR+WL+GY+ER
Sbjct: 225 QTPRVWLFGYDER 237



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 27/36 (75%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           DQM+ED+ QDYA +TVTME HPH      ASIHPC+
Sbjct: 244 DQMFEDIMQDYANRTVTMEPHPHRSSLVHASIHPCQ 279


>gi|325182781|emb|CCA17236.1| autophagocytosis associated protein putative [Albugo laibachii
           Nc14]
          Length = 312

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 84/138 (60%), Gaps = 11/138 (7%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQS+ +       GV EYLTP+L ES F + G++TPEEFV AGD LV+ CPTWQW SG  
Sbjct: 1   MQSIFH-------GVREYLTPILTESSFEQKGILTPEEFVKAGDLLVYKCPTWQWESGQS 53

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           S  + YLP +KQ+L+T+NVPC +R   +D   + ++ ++ E D   WV T  Y   T   
Sbjct: 54  SARRPYLPADKQYLVTRNVPCRQRITALDTSYQCEEAVDGESD---WVSTSSYPTVTSLQ 110

Query: 374 IAIEDKISEISLDASTGW 391
            A+E ++  ISL   T +
Sbjct: 111 -AMEQQLDHISLKDDTPF 127



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 59/84 (70%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL  D +++D+ QDYAK+TVTME HPH P    ASIHPC+HA VMK+II  +      L 
Sbjct: 223 PLDEDAIFQDIMQDYAKQTVTMEPHPHNPTLLHASIHPCQHAAVMKRIISNLTASASHLR 282

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFT 96
              YL +FLKF+QSVIPTI+YD T
Sbjct: 283 SDQYLFVFLKFIQSVIPTIDYDHT 306



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 168 DMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           D+  FEE   ++++    A +       + P  D+     I+RTRTYDL ITYDKYYQTP
Sbjct: 160 DLSTFEEENLVEDK----AALSSSYLVATEPMDDA-----ILRTRTYDLSITYDKYYQTP 210

Query: 228 RLWLYGYNE 236
           R+WL+GY+E
Sbjct: 211 RVWLFGYDE 219



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQTQSCNKPNS 155
           D +++D+ QDYAK+TVTME HPH P    ASIHPC+    +K   SN T S +   S
Sbjct: 227 DAIFQDIMQDYAKQTVTMEPHPHNPTLLHASIHPCQHAAVMKRIISNLTASASHLRS 283


>gi|402583875|gb|EJW77818.1| hypothetical protein WUBG_11273 [Wuchereria bancrofti]
          Length = 226

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/89 (62%), Positives = 69/89 (77%), Gaps = 1/89 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLTVD+M  D SQD+  KT+TME HP+     MASIHPCRHAEVMK++IE + E G EL 
Sbjct: 139 PLTVDKMNADFSQDHINKTITMEPHPYF-RTAMASIHPCRHAEVMKRLIEQLAESGKELS 197

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           V  YL+IFLKFVQ+VIPTIEYD+T++  +
Sbjct: 198 VDQYLLIFLKFVQAVIPTIEYDYTRSIQL 226



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 7/65 (10%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           F   G L+E DP       E+++ +   GD+    +++ TRTYDLHITYDKYYQ PRLWL
Sbjct: 78  FVAEGGLEENDP--YRFVEEERNETE--GDTD---NVLHTRTYDLHITYDKYYQVPRLWL 130

Query: 232 YGYNE 236
            GY+E
Sbjct: 131 CGYDE 135



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TVD+M  D SQD+  KT+TME HP+     MASIHPCR
Sbjct: 140 LTVDKMNADFSQDHINKTITMEPHPYF-RTAMASIHPCR 177


>gi|321264201|ref|XP_003196818.1| autophagy-related protein [Cryptococcus gattii WM276]
 gi|317463295|gb|ADV25031.1| Autophagy-related protein, putative [Cryptococcus gattii WM276]
          Length = 385

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 10/121 (8%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M + + +++     V +YL+PVLKESKF+E G +TPEEFVAAGD L    P WQW  G+ 
Sbjct: 1   MNNPLLAIQSQYWAVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLTFKFPVWQWEKGEP 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIENEQDEE-------GWVDT 363
           S+A+ +LPP+KQ+L+T+NVPC RR   +DY    E+ +K++    D E        WV T
Sbjct: 61  SRARDFLPPDKQYLVTRNVPCLRRATAVDYTNADEDAEKLLSFLDDAEEAPGPDDDWVAT 120

Query: 364 H 364
           H
Sbjct: 121 H 121



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG 69
           + PLT  Q+++DV  D+A KT+TMES PH  G  +AS+HPC+HA VMKK I+ +    G
Sbjct: 238 KNPLTPAQVFQDVPADHAFKTMTMESFPH-SGAQLASVHPCKHASVMKKFIDRMEAAQG 295



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 5/57 (8%)

Query: 180 EQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           E D ++  + P +   +S AG      ++++ RTYD  I+YDK+YQTPR WL+GY+E
Sbjct: 185 EDDAAVRIVHPSEAEVNSTAGK-----NLLQVRTYDCIISYDKHYQTPRFWLFGYDE 236



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 93  YDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR--AIKSKASNQTQS 149
           YD  +N  T  Q+++DV  D+A KT+TMES PH  G  +AS+HPC+  ++  K  ++ ++
Sbjct: 234 YDEHKNPLTPAQVFQDVPADHAFKTMTMESFPH-SGAQLASVHPCKHASVMKKFIDRMEA 292

Query: 150 CNKPNSTEE 158
              P  T E
Sbjct: 293 AQGPALTTE 301


>gi|159483493|ref|XP_001699795.1| autophagy protein [Chlamydomonas reinhardtii]
 gi|158281737|gb|EDP07491.1| autophagy protein [Chlamydomonas reinhardtii]
          Length = 306

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 71/90 (78%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL   Q+ EDVS+++A+KT+T++ HPHL G   ASIHPCRHA+VMKK+++ +LE G
Sbjct: 213 ESRKPLLPQQVMEDVSEEHARKTITVDPHPHLAGLSAASIHPCRHADVMKKLVDNLLEAG 272

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            E  V  YL++FLKF+ SV+PTI+YD+T +
Sbjct: 273 REFKVEQYLVLFLKFIASVVPTIQYDYTMS 302



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 1/96 (1%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLIT 329
           E +TP L +S+F E  V+TP+EFVAAGD+LVH CPTW W  GD  K ++Y PPNKQFL+T
Sbjct: 17  ETVTPPLTKSQFEEKRVLTPDEFVAAGDYLVHACPTWSWEGGDPKKRRTYFPPNKQFLVT 76

Query: 330 KNVPCPRRCKQID-YCEEKQKIIENEQDEEGWVDTH 364
           +NVPC +R  +++ Y    +  +   + E+ WV TH
Sbjct: 77  RNVPCLKRATELEGYNPNSEFDVGGGEGEDAWVATH 112



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 191 EKQSPSS-PAGDSQECGD-IVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           E  +PS  P   ++E  D I+RTRTYDL+ITYD+YYQ PR WL G++E  K
Sbjct: 166 EAAAPSGRPYLRAEEPADNIMRTRTYDLYITYDQYYQVPRFWLVGHDESRK 216



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 29/35 (82%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q+ EDVS+++A+KT+T++ HPHL G   ASIHPCR
Sbjct: 222 QVMEDVSEEHARKTITVDPHPHLAGLSAASIHPCR 256


>gi|388579224|gb|EIM19550.1| hypothetical protein WALSEDRAFT_41096 [Wallemia sebi CBS 633.66]
          Length = 356

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 15/145 (10%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M  +  +++     V +YL P+L+ESKF+E G +TP+EFVAAGD L +  PTWQW  GDE
Sbjct: 1   MTGIQGTIQTQFWAVRDYLAPILRESKFKEHGRITPDEFVAAGDFLTYKFPTWQWTGGDE 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEK--------------QKIIENEQDEEG 359
           SK + YLP +KQ+LIT+NVP  RR K I Y +                +  I +++ E+ 
Sbjct: 61  SKRREYLPSDKQYLITRNVPSLRRAKDIAYTDSSGDPDNEAFLKFVNDELTIGDDEGEDD 120

Query: 360 WVDTHHYDETTGKDIAIEDKISEIS 384
           WV TH  +  +G+   + D I  IS
Sbjct: 121 WVQTHAGNNPSGR-AELPDIIPSIS 144



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 62/133 (46%), Gaps = 47/133 (35%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPH-LPGPPMASIHPCRHAEVMKKIIE-----TVLE 66
           PLT +Q+ EDV  D+A KTVT E  PH     PM S+HPC+HA VMKK+IE     T LE
Sbjct: 225 PLTYNQILEDVPSDHANKTVTSEPFPHSASNTPMLSVHPCKHASVMKKMIERMDSKTKLE 284

Query: 67  ------------------------GGGE----------------LGVHMYLIIFLKFVQS 86
                                   GG +                L V  YL++FLKF+  
Sbjct: 285 PSPVTTTGVPPATPKKKGWLSSVVGGSKKQQPQQPQNPLEFEDGLRVDQYLVMFLKFMAG 344

Query: 87  VIPTIEYDFTQNF 99
           ++ T+E D T +F
Sbjct: 345 IL-TVEIDATTSF 356



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 28/42 (66%)

Query: 195 PSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  PA        +++ RTYD  ITYDKYYQTPRLWL GY+E
Sbjct: 180 PEDPAAAEISQTGVLKVRTYDCIITYDKYYQTPRLWLQGYDE 221



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 69  GELGVHMY--LIIFLKFVQSVIPTIE-YDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPH 124
           G L V  Y  +I + K+ Q+    ++ YD  QN  T +Q+ EDV  D+A KTVT E  PH
Sbjct: 192 GVLKVRTYDCIITYDKYYQTPRLWLQGYDEHQNPLTYNQILEDVPSDHANKTVTSEPFPH 251

Query: 125 -LPGPPMASIHPCR 137
                PM S+HPC+
Sbjct: 252 SASNTPMLSVHPCK 265


>gi|58260390|ref|XP_567605.1| autophagy-related protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134117421|ref|XP_772604.1| hypothetical protein CNBK3080 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|338817598|sp|P0CM35.1|ATG3_CRYNB RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|338817599|sp|P0CM34.1|ATG3_CRYNJ RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|50255221|gb|EAL17957.1| hypothetical protein CNBK3080 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229686|gb|AAW46088.1| autophagy-related protein, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 385

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 10/121 (8%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M + + +++     V +YL+PVL+ESKF+E G +TPEEFVAAGD L    P WQW  G+ 
Sbjct: 1   MNNPLLAIQSQYWAVRDYLSPVLRESKFKEHGRITPEEFVAAGDFLTFKFPVWQWEKGES 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIENEQDEE-------GWVDT 363
           S+A+ +LPP+KQ+L+T+NVPC RR   +DY    E+ +K++    D E        WV T
Sbjct: 61  SRARDFLPPDKQYLVTRNVPCLRRATAVDYTNADEDAEKLLSFLDDAEEAPGPDDDWVAT 120

Query: 364 H 364
           H
Sbjct: 121 H 121



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG 69
           + PLT  Q+++DV  D+A KT+TMES PH  G  +AS+HPC+HA VMKK I+ +    G
Sbjct: 238 KNPLTPAQVFQDVPADHAFKTMTMESFPH-SGAQLASVHPCKHASVMKKFIDRMEAAQG 295



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 5/57 (8%)

Query: 180 EQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           E D ++  + P +   +S AG      ++++ RTYD  I+YDK+YQTPR WL+GY+E
Sbjct: 185 EDDAAVRIVHPSEAEVNSTAGK-----NLLQVRTYDCIISYDKHYQTPRFWLFGYDE 236



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 93  YDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR--AIKSKASNQTQS 149
           YD  +N  T  Q+++DV  D+A KT+TMES PH  G  +AS+HPC+  ++  K  ++ ++
Sbjct: 234 YDEHKNPLTPAQVFQDVPADHAFKTMTMESFPH-SGAQLASVHPCKHASVMKKFIDRMEA 292

Query: 150 CNKPNSTEE 158
              P  T E
Sbjct: 293 AQGPAPTAE 301


>gi|392580186|gb|EIW73313.1| hypothetical protein TREMEDRAFT_67322 [Tremella mesenterica DSM
           1558]
          Length = 386

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 79/129 (61%), Gaps = 18/129 (13%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M + + +++     V +YL+PVLKESKF+E G +TPEEFVAAGD L    P WQW  GD 
Sbjct: 1   MNNPLLAIQSQYWAVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLTFKFPVWQWEKGDP 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIE---------------NEQ 355
           S+A+ +LPP+KQ+LIT+NVPC RR   I+Y    E+ +K++                 + 
Sbjct: 61  SRARDFLPPDKQYLITRNVPCLRRATAINYTDADEDAEKLMSFMDEAEEAPGPDGKPRKA 120

Query: 356 DEEGWVDTH 364
           ++E WV TH
Sbjct: 121 EDEDWVATH 129



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 45/127 (35%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE----------- 62
           LT  Q+++DV  D+A KT+TME+ PH  G  +AS+HPC+HA VMKK I+           
Sbjct: 256 LTPAQVFQDVPADHAFKTMTMEAFPH-SGQQLASVHPCKHASVMKKFIDRMEAAQNQGED 314

Query: 63  --TVLEGGGE-------------------------------LGVHMYLIIFLKFVQSVIP 89
             T    G +                               L V  YL+IFLKF+ S++P
Sbjct: 315 TKTTAAAGSKKKWGLGGMVRKVTGSEKPKEKEASAEDEATGLQVDFYLVIFLKFIASIVP 374

Query: 90  TIEYDFT 96
           TIE D T
Sbjct: 375 TIEVDST 381



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 5/58 (8%)

Query: 179 DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           D+ D ++  + P      S AG      ++++ RTYD  I+YDK+YQTPR WL+GY+E
Sbjct: 199 DDDDAAVRIVHPSAAEVQSAAGQ-----NLLQVRTYDCLISYDKHYQTPRFWLFGYDE 251



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  T  Q+++DV  D+A KT+TME+ PH  G  +AS+HPC+
Sbjct: 254 QTLTPAQVFQDVPADHAFKTMTMEAFPH-SGQQLASVHPCK 293


>gi|255539835|ref|XP_002510982.1| conserved hypothetical protein [Ricinus communis]
 gi|223550097|gb|EEF51584.1| conserved hypothetical protein [Ricinus communis]
          Length = 314

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 218 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 276

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  VH YL +FLKFV SVIPTIEYD+T +F
Sbjct: 277 VEPEVHKYLFLFLKFVASVIPTIEYDYTMDF 307



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 2/100 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EF+ AGD+LV  CPTW W SG+ SK  SYLPP KQF
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWSWESGEPSKRMSYLPPEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           LIT+NVPC RR   +  +Y     +++ + +D +GW+ TH
Sbjct: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATH 112



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 8/86 (9%)

Query: 162 DDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYD 221
           ++E+  DM+D+E+   L E DP  A +         P  D     +I+RTRTYD+ ITYD
Sbjct: 151 EEEDIPDMDDYEDPNNLIESDP--ATLQSTYLIAHEPDDD-----NILRTRTYDVSITYD 203

Query: 222 KYYQTPRLWLYGYNE-RFKGKENLVL 246
           KYYQTPR+WL GY+E R   +  LVL
Sbjct: 204 KYYQTPRVWLTGYDESRMLLQPELVL 229



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 228 VLEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 260


>gi|449445501|ref|XP_004140511.1| PREDICTED: autophagy-related protein 3-like [Cucumis sativus]
 gi|449518194|ref|XP_004166128.1| PREDICTED: autophagy-related protein 3-like [Cucumis sativus]
          Length = 315

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 69/91 (75%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 218 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 276

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  VH YL +FLKFV SVIPTIEYD+T +F
Sbjct: 277 VEPEVHKYLFLFLKFVASVIPTIEYDYTMDF 307



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 66/100 (66%), Gaps = 2/100 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD +K KSYLPP+KQF
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           LIT+NVPC RR   +  +Y     +++ + +D +GW+ TH
Sbjct: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATH 112



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 8/76 (10%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
            EE+  +   DP  A +P   Q    P  D     +I+RTRTYD+ ITYDKYYQTPR+WL
Sbjct: 161 IEETDNVVGTDP--ATLPLTYQIAHEPDDD-----NILRTRTYDVSITYDKYYQTPRVWL 213

Query: 232 YGYNE-RFKGKENLVL 246
            GY+E R   +  LVL
Sbjct: 214 TGYDESRMLLQPELVL 229



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 228 VLEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 260


>gi|218187692|gb|EEC70119.1| hypothetical protein OsI_00782 [Oryza sativa Indica Group]
          Length = 316

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 69/91 (75%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  + ++ED+SQD+A+KTVT+E HPHL     AS+HPC+HA VMKKII+ ++  G
Sbjct: 219 ESRMPLKPELVFEDISQDHARKTVTIEDHPHLSAGKHASVHPCKHAAVMKKIIDVLMSRG 278

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL IFLKF+ SVIPTIEYD+T +F
Sbjct: 279 VEPEVDKYLFIFLKFMASVIPTIEYDYTMDF 309



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F + GV++  EF+ AGD+LV  CPTW W +GD SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLDKGVLSVPEFILAGDNLVSKCPTWSWEAGDPSKRKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   ++        + ++ +++D EGW+ TH
Sbjct: 73  LVTRNVPCLRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATH 113



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 11/93 (11%)

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTY 214
           S  ++ +++E+  DM+ +E+SG     + S+A   P       P  D     +I+RTRTY
Sbjct: 148 SAGKKAEEEEDIPDMDTYEDSG-----NDSVATAQPSYFVAEEPEDD-----NILRTRTY 197

Query: 215 DLHITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           D+ ITYDKYYQTPR+WL GY+E R   K  LV 
Sbjct: 198 DVSITYDKYYQTPRVWLTGYDESRMPLKPELVF 230



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ED+SQD+A+KTVT+E HPHL     AS+HPC+
Sbjct: 229 VFEDISQDHARKTVTIEDHPHLSAGKHASVHPCK 262


>gi|115435110|ref|NP_001042313.1| Os01g0200000 [Oryza sativa Japonica Group]
 gi|20804509|dbj|BAB92203.1| putative autophagocytosis protein [Oryza sativa Japonica Group]
 gi|113531844|dbj|BAF04227.1| Os01g0200000 [Oryza sativa Japonica Group]
 gi|222617928|gb|EEE54060.1| hypothetical protein OsJ_00756 [Oryza sativa Japonica Group]
          Length = 316

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 69/91 (75%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  + ++ED+SQD+A+KTVT+E HPHL     AS+HPC+HA VMKKII+ ++  G
Sbjct: 219 ESRMPLKPELVFEDISQDHARKTVTIEDHPHLSAGKHASVHPCKHAAVMKKIIDVLMSQG 278

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL IFLKF+ SVIPTIEYD+T +F
Sbjct: 279 VEPEVDKYLFIFLKFMASVIPTIEYDYTMDF 309



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F + GV++  EF+ AGD+LV  CPTW W +GD SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLDKGVLSVPEFILAGDNLVSKCPTWSWEAGDPSKRKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   ++        + ++ +++D EGW+ TH
Sbjct: 73  LVTRNVPCLRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATH 113



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 11/93 (11%)

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTY 214
           S  ++ +++E+  DM+ +E+SG     + S+A   P       P  D     +I+RTRTY
Sbjct: 148 SAGKKAEEEEDIPDMDTYEDSG-----NDSVATAQPSYFVAEEPEDD-----NILRTRTY 197

Query: 215 DLHITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           D+ ITYDKYYQTPR+WL GY+E R   K  LV 
Sbjct: 198 DVSITYDKYYQTPRVWLTGYDESRMPLKPELVF 230



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ED+SQD+A+KTVT+E HPHL     AS+HPC+
Sbjct: 229 VFEDISQDHARKTVTIEDHPHLSAGKHASVHPCK 262


>gi|403412012|emb|CCL98712.1| predicted protein [Fibroporia radiculosa]
          Length = 951

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 78/125 (62%), Gaps = 13/125 (10%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N   + +++++     V +YL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  
Sbjct: 559 ANHFFANMHAIQQQYWAVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLAYKFPVWSWEK 618

Query: 311 GDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIE--------NEQDEEG 359
           GD SKA+ YLP +KQ+L+T+ VPC RR   + Y    E+ ++++         NE DE  
Sbjct: 619 GDASKARDYLPTDKQYLVTRGVPCLRRATALAYTDADEDAERLLSIGDLSSTGNEADE-- 676

Query: 360 WVDTH 364
           WV+TH
Sbjct: 677 WVETH 681



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 48/138 (34%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIET----VL 65
           +R PLT  Q+++DVS D+A KTVT+E+ PH      AS+HPC+HA VMKK+IE     V+
Sbjct: 814 NRTPLTPPQIFQDVSADHAFKTVTIEAFPHSTSLQAASVHPCKHASVMKKVIERMNAGVI 873

Query: 66  E-----------------------------GGGE---------------LGVHMYLIIFL 81
           E                             G G+               + V  YL++FL
Sbjct: 874 EEQQAQRKAFASGPASPKDKQKKWLFRRASGNGKEDKTPTTPGEEEMEGMRVDFYLVVFL 933

Query: 82  KFVQSVIPTIEYDFTQNF 99
           KF+ S++PTIE D T  F
Sbjct: 934 KFIASIVPTIEVDSTTAF 951



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 4/49 (8%)

Query: 192 KQSPSSPAGDSQEC----GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           + +P+S   DS E     G++++ RTYD+ I+YDKYYQTPR+WL GY+E
Sbjct: 758 RVTPTSRIIDSSEVEVAKGNLLQVRTYDVMISYDKYYQTPRIWLIGYDE 806



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 27/39 (69%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T  Q+++DVS D+A KTVT+E+ PH      AS+HPC+
Sbjct: 818 LTPPQIFQDVSADHAFKTVTIEAFPHSTSLQAASVHPCK 856


>gi|392569460|gb|EIW62633.1| hypothetical protein TRAVEDRAFT_26292 [Trametes versicolor
           FP-101664 SS1]
          Length = 373

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 13/129 (10%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +++++     V EYL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  GD +KA+
Sbjct: 1   MHTIQQQYWAVREYLSPVLKESKFKEHGRITPEEFVAAGDFLAYKFPVWTWEKGDPAKAR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIE--------NEQDEEGWVDTHHY 366
            YLP +KQ+L+T+ VPC RR   + Y    E+ ++++         NE DE  WV+TH  
Sbjct: 61  DYLPADKQYLLTRGVPCLRRATALAYTDADEDAERLLSFGDLSATGNEADE--WVETHTG 118

Query: 367 DETTGKDIA 375
             TT   +A
Sbjct: 119 RPTTTDSVA 127



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 43/130 (33%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIET----VLE-- 66
           PLT  Q+++DVS D+A KTVT+E+ PH      AS+HPC+HA VMKK+IE     V+E  
Sbjct: 244 PLTPPQIFQDVSADHAFKTVTIEAFPHSGSLQAASVHPCKHASVMKKVIERMNQGVIEEQ 303

Query: 67  -----GGGE--------------------------------LGVHMYLIIFLKFVQSVIP 89
                GGG                                 + V  YL++FLKF+ S++P
Sbjct: 304 RAARGGGGASSPKDGKQKKWLFRRASGNGKDAQAGDEDIEGMRVDFYLVVFLKFIASIVP 363

Query: 90  TIEYDFTQNF 99
           TIE D T  F
Sbjct: 364 TIEVDSTTAF 373



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 7/51 (13%)

Query: 193 QSPSSPAG-----DSQEC--GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           ++ ++PAG     D  E   G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 190 KTSAAPAGGVITADEVEAAKGNLLQVRTYDVMITYDKYYQTPRIWLIGYDE 240



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 68  GGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHP 123
           G  L V  Y  +I + K+ Q+  I  I YD      T  Q+++DVS D+A KTVT+E+ P
Sbjct: 210 GNLLQVRTYDVMITYDKYYQTPRIWLIGYDENGTPLTPPQIFQDVSADHAFKTVTIEAFP 269

Query: 124 HLPGPPMASIHPCR 137
           H      AS+HPC+
Sbjct: 270 HSGSLQAASVHPCK 283


>gi|449546722|gb|EMD37691.1| E2-like enzyme [Ceriporiopsis subvermispora B]
          Length = 377

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 82/137 (59%), Gaps = 13/137 (9%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +++++     V +YL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  GD SKA+
Sbjct: 1   MHAIQQQYWAVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLAYKFPVWSWERGDASKAR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIE--------NEQDEEGWVDTHHY 366
            YLP +KQ+L+T+ VPC RR   + Y    E+ ++++         NE DE  WV+TH  
Sbjct: 61  DYLPADKQYLVTRGVPCLRRATALAYTDADEDAERLLSFGDLSSTGNEADE--WVETHTG 118

Query: 367 DETTGKDIAIEDKISEI 383
              T    A   +I EI
Sbjct: 119 RANTHDSAANPGEIDEI 135



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 66/137 (48%), Gaps = 46/137 (33%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG- 67
           ++R PLT  Q+++DVS D+A KTVT+E  PH      AS+HPC+HA VMKK+IE + +G 
Sbjct: 241 ENRTPLTPSQIFQDVSADHAFKTVTIEPFPHSATLQAASVHPCKHASVMKKVIERMNQGV 300

Query: 68  ----------GGE-----------------------------------LGVHMYLIIFLK 82
                     GG                                    + V  YL++FLK
Sbjct: 301 IEEQQARRASGGAPVQKDKRGKWLFRRASGNGKDDKISAPPGEEDVEGMRVDFYLVVFLK 360

Query: 83  FVQSVIPTIEYDFTQNF 99
           F+ S++PTIE D T  F
Sbjct: 361 FIASIVPTIEVDSTTAF 377



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 9/51 (17%)

Query: 195 PSSPAGDSQEC---------GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P+ P  DS+           G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 191 PTKPVADSEGLEPCEVEVAKGNLLQVRTYDVMITYDKYYQTPRIWLIGYDE 241



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 17/104 (16%)

Query: 41  PGPPMA---SIHPCRHAEVMKKIIETVLEGGGELGVHMY--LIIFLKFVQS-VIPTIEYD 94
           P  P+A    + PC   EV K         G  L V  Y  +I + K+ Q+  I  I YD
Sbjct: 191 PTKPVADSEGLEPC-EVEVAK---------GNLLQVRTYDVMITYDKYYQTPRIWLIGYD 240

Query: 95  FTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
             +   T  Q+++DVS D+A KTVT+E  PH      AS+HPC+
Sbjct: 241 ENRTPLTPSQIFQDVSADHAFKTVTIEPFPHSATLQAASVHPCK 284


>gi|357147404|ref|XP_003574332.1| PREDICTED: autophagy-related protein 3-like [Brachypodium
           distachyon]
          Length = 316

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 68/91 (74%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  + ++ED+SQD+A+KTVT+E HPH      AS+HPC+HA VMKKII+ ++  G
Sbjct: 219 ESRMPLKPELVFEDISQDHARKTVTIEDHPHFLAGKHASVHPCKHAAVMKKIIDVLMSRG 278

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL IFLKF+ SVIPTIEYD+T +F
Sbjct: 279 VEPEVDKYLFIFLKFMASVIPTIEYDYTMDF 309



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 3/110 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF  AGD+LV  CPTW W +GD SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLEKGVLSVAEFTLAGDNLVSKCPTWSWEAGDPSKKKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           L+T+NVPC RR   ++     E  + ++++++D EGW+ TH    +  K+
Sbjct: 73  LVTRNVPCLRRAVSLEEEYDAEGAEVVLDDDEDGEGWLATHGVQASKAKE 122



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 11/90 (12%)

Query: 158 EEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLH 217
           E+ D++E+  DM+ +E++G     D SIA+  P       P  D     +I+RTRTYD+ 
Sbjct: 151 EKQDEEEDIPDMDTYEDTG-----DDSIASTQPSYFVTEEPEDD-----NILRTRTYDVS 200

Query: 218 ITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           ITYDKYYQTPR+WL GY+E R   K  LV 
Sbjct: 201 ITYDKYYQTPRVWLTGYDESRMPLKPELVF 230



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 27/34 (79%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ED+SQD+A+KTVT+E HPH      AS+HPC+
Sbjct: 229 VFEDISQDHARKTVTIEDHPHFLAGKHASVHPCK 262


>gi|225453454|ref|XP_002276342.1| PREDICTED: autophagy-related protein 3 [Vitis vinifera]
 gi|297734579|emb|CBI16630.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL  + + EDVSQD+A KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 218 EARMPLQPELVLEDVSQDHAHKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 276

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKFV SVIPTIEYD+T +F
Sbjct: 277 VEPEVDKYLFLFLKFVASVIPTIEYDYTMDF 307



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 3/124 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SG+  K KSYLPP KQ+
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVTEFVIAGDNLVSKCPTWSWESGEPGKRKSYLPPEKQY 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEIS 384
           LIT+NVPC RR   +  +Y     +++ + +D +GW+ TH   + T  D A E+  S  +
Sbjct: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKGD-AEENLPSMET 131

Query: 385 LDAS 388
           LD S
Sbjct: 132 LDIS 135



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 8/87 (9%)

Query: 161 DDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITY 220
           +++E+  DM D+EE+  + E D +   +P        P  D     +I+RTRTYD+ ITY
Sbjct: 150 EEEEDIPDMADYEETDNVVEADAATLQMP--YLVAHEPDDD-----NILRTRTYDVSITY 202

Query: 221 DKYYQTPRLWLYGYNE-RFKGKENLVL 246
           DKYYQTPR+WL GY+E R   +  LVL
Sbjct: 203 DKYYQTPRVWLTGYDEARMPLQPELVL 229



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 28/34 (82%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A KTVT+E HPHLPG   AS+HPCR
Sbjct: 228 VLEDVSQDHAHKTVTIEDHPHLPG-KHASVHPCR 260


>gi|405119375|gb|AFR94148.1| preconditioning-inducible protein [Cryptococcus neoformans var.
           grubii H99]
          Length = 385

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 10/121 (8%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M + + +++     V +YL+PVLKESKF+E G +TPEEFVAAGD L    P WQW  G+ 
Sbjct: 1   MNNPLLAIQSQYWAVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLTFKFPVWQWEKGEP 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIENEQDEE-------GWVDT 363
           S+A+ +LP +KQ+L+T+NVPC RR   +DY    E+ +K++    D E        WV T
Sbjct: 61  SRARDFLPLDKQYLVTRNVPCLRRATAVDYTNADEDAEKLLSFLDDAEEAPGPDDDWVAT 120

Query: 364 H 364
           H
Sbjct: 121 H 121



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG 69
           + PLT  Q+++DV  D+A KT+TMES PH  G  +AS+HPC+HA VMKK I+ +    G
Sbjct: 238 KNPLTPAQVFQDVPADHAFKTMTMESFPH-SGAQLASVHPCKHASVMKKFIDRMEAAQG 295



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 30/42 (71%)

Query: 195 PSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           PS    +S    ++++ RTYD  I+YDK+YQTPR WL+GY+E
Sbjct: 195 PSEAEVNSTAGKNLLQVRTYDCIISYDKHYQTPRFWLFGYDE 236



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 4/69 (5%)

Query: 93  YDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR--AIKSKASNQTQS 149
           YD  +N  T  Q+++DV  D+A KT+TMES PH  G  +AS+HPC+  ++  K  ++ ++
Sbjct: 234 YDEHKNPLTPAQVFQDVPADHAFKTMTMESFPH-SGAQLASVHPCKHASVMKKFIDRMEA 292

Query: 150 CNKPNSTEE 158
              P    E
Sbjct: 293 AQGPAPITE 301


>gi|216263256|gb|ACJ72033.1| autophagy-related 3 variant 1 [Zea mays]
 gi|238010278|gb|ACR36174.1| unknown [Zea mays]
 gi|413955226|gb|AFW87875.1| autophagy protein 3 [Zea mays]
          Length = 311

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 68/90 (75%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  + ++ED+SQD+A+KTVT+E HPHL     AS+HPC+HA VMKKII+  + GG
Sbjct: 215 ESRMPLMPELVFEDISQDHARKTVTIEDHPHLLAGKHASVHPCKHAAVMKKIIDVPMSGG 274

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            E  V  YL IFLKF+ +VIPTIEYD+T +
Sbjct: 275 VEPEVDKYLFIFLKFIATVIPTIEYDYTMD 304



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 3/100 (3%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLP NKQF
Sbjct: 13  GTVERVTAPRTVSAFLEKGVLSVPEFILAGDNLVAKCPTWSWEAGDPSKRKPYLPANKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   +  +Y     +++ +E D EGW+ TH
Sbjct: 73  LVTRNVPCLRRAISVEEEYDAAGAEVVLDE-DGEGWLATH 111



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 11/78 (14%)

Query: 159 EDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHI 218
           +D+++E+  DM+ +E++G          N+      PS    +  E  +I+ TRTYD+ I
Sbjct: 149 KDEEEEDIPDMDTYEDTG---------DNL--AAAEPSYFIAEEPEDDNILHTRTYDVSI 197

Query: 219 TYDKYYQTPRLWLYGYNE 236
           TYDKYYQTPR+WL GY+E
Sbjct: 198 TYDKYYQTPRVWLTGYDE 215



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ED+SQD+A+KTVT+E HPHL     AS+HPC+
Sbjct: 225 VFEDISQDHARKTVTIEDHPHLLAGKHASVHPCK 258


>gi|221137001|ref|NP_001137487.1| LOC100240689 [Zea mays]
 gi|195651049|gb|ACG44992.1| autophagy-related protein 3 [Zea mays]
          Length = 311

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 68/90 (75%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  + ++ED+SQD+A+KTVT+E HPHL     AS+HPC+HA VMKKII+  + GG
Sbjct: 215 ESRMPLMPELVFEDISQDHARKTVTIEDHPHLLAGKHASVHPCKHAAVMKKIIDVPMSGG 274

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            E  V  YL IFLKF+ +VIPTIEYD+T +
Sbjct: 275 VEPEVDKYLFIFLKFIATVIPTIEYDYTMD 304



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 3/100 (3%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLP NKQF
Sbjct: 13  GTVERVTAPRTVSAFLEKGVLSVPEFILAGDNLVAKCPTWSWEAGDPSKRKPYLPANKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   +  +Y     +++ +E D EGW+ TH
Sbjct: 73  LVTRNVPCLRRAISVEEEYDAAGAEVVLDE-DGEGWLATH 111



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 11/78 (14%)

Query: 159 EDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHI 218
           +D+++E+  DM+ +E++G       ++A   P       P  D     +I+ TRTYD+ I
Sbjct: 149 KDEEEEDIPDMDTYEDTG------DNLAAAEPSYFIAEEPQDD-----NILHTRTYDVSI 197

Query: 219 TYDKYYQTPRLWLYGYNE 236
           TYDKYYQTPR+WL GY+E
Sbjct: 198 TYDKYYQTPRVWLTGYDE 215



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ED+SQD+A+KTVT+E HPHL     AS+HPC+
Sbjct: 225 VFEDISQDHARKTVTIEDHPHLLAGKHASVHPCK 258


>gi|9758466|dbj|BAB08995.1| autophagocytosis protein AUT1-like [Arabidopsis thaliana]
          Length = 334

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 70/94 (74%), Gaps = 1/94 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 217 ESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
            E  V  YL +FLKF+ SVIPTIEYD+T +F +D
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLD 309



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD SK K YLP +KQF
Sbjct: 13  GTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   +  DY     +++ +++D +GW+ TH   +  GK+
Sbjct: 73  LITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKGKE 121



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A+     N  QS       EE+DD      DME+F+E+  + E DP  A +         
Sbjct: 130 ALDINEKNTIQSIPTYFGGEEDDD----IPDMEEFDEADNVVENDP--ATLQSTYLVAHE 183

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  D+     I+RTRTYDL ITYDKYYQTPR+WL GY+E
Sbjct: 184 PDDDN-----ILRTRTYDLSITYDKYYQTPRVWLTGYDE 217



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 28/32 (87%), Gaps = 1/32 (3%)

Query: 106 EDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 229 EDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 259


>gi|413955227|gb|AFW87876.1| autophagy 3 variant 2 [Zea mays]
          Length = 218

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 68/90 (75%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  + ++ED+SQD+A+KTVT+E HPHL     AS+HPC+HA VMKKII+  + GG
Sbjct: 122 ESRMPLMPELVFEDISQDHARKTVTIEDHPHLLAGKHASVHPCKHAAVMKKIIDVPMSGG 181

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            E  V  YL IFLKF+ +VIPTIEYD+T +
Sbjct: 182 VEPEVDKYLFIFLKFIATVIPTIEYDYTMD 211



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 11/78 (14%)

Query: 159 EDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHI 218
           +D+++E+  DM+ +E++G       ++A   P       P  D     +I+ TRTYD+ I
Sbjct: 56  KDEEEEDIPDMDTYEDTG------DNLAAAEPSYFIAEEPEDD-----NILHTRTYDVSI 104

Query: 219 TYDKYYQTPRLWLYGYNE 236
           TYDKYYQTPR+WL GY+E
Sbjct: 105 TYDKYYQTPRVWLTGYDE 122



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ED+SQD+A+KTVT+E HPHL     AS+HPC+
Sbjct: 132 VFEDISQDHARKTVTIEDHPHLLAGKHASVHPCK 165


>gi|224138464|ref|XP_002326609.1| predicted protein [Populus trichocarpa]
 gi|222833931|gb|EEE72408.1| predicted protein [Populus trichocarpa]
          Length = 315

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 219 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 277

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKFV SVIPTIEYD+T +F
Sbjct: 278 VEPEVDKYLFLFLKFVASVIPTIEYDYTMDF 308



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 3/133 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EF+ AGD+LV  CPTW W SG+ SK KSYLP  KQF
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPSKRKSYLPAEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHY-DETTGKDIAIEDKISEI 383
           LIT+NVPC RR   +  +Y     +++ + +D +GW+ TH    ET G +      +  +
Sbjct: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKGDEDENVPSMEAL 132

Query: 384 SLDASTGWVDTHH 396
            + A    + T+H
Sbjct: 133 EISAKKSLIQTNH 145



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 8/87 (9%)

Query: 161 DDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITY 220
           +++E+  DM DFE+   L E DP  A +         P  D     +I+RTRTYD+ ITY
Sbjct: 151 EEEEDIPDMADFEDPDNLIESDP--ATLQTTYLVAHEPDDD-----NILRTRTYDVSITY 203

Query: 221 DKYYQTPRLWLYGYNE-RFKGKENLVL 246
           DKYYQTPR+WL GY+E R   +  LVL
Sbjct: 204 DKYYQTPRVWLTGYDESRMLLQPELVL 230



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 229 VLEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 261


>gi|393217329|gb|EJD02818.1| hypothetical protein FOMMEDRAFT_167963 [Fomitiporia mediterranea
           MF3/22]
          Length = 373

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 11/107 (10%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            V EYL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  GD SKAK YLP +KQ+
Sbjct: 10  AVREYLSPVLKESKFKEHGRITPEEFVAAGDFLTYKFPVWTWQKGDASKAKEYLPTDKQY 69

Query: 327 LITKNVPCPRRCKQIDYC---EEKQKIIE------NEQDEEGWVDTH 364
           L+T+ VPC RR   + Y    E+ ++++        E DE  WV+TH
Sbjct: 70  LLTRGVPCLRRAASLAYTDADEDAERMVSAMDGTAAEGDE--WVETH 114



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 59/134 (44%), Gaps = 47/134 (35%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG----- 67
           PL   Q+++DV  D+A KTVT+E   H      A +HPC+HA VMKKIIE +  G     
Sbjct: 240 PLKPTQIFQDVPADHAFKTVTIEPFAHSTSLQAALVHPCKHASVMKKIIERMNAGVIEEQ 299

Query: 68  ------------------------------------GGE------LGVHMYLIIFLKFVQ 85
                                                GE      + V  YL+IFLKF+ 
Sbjct: 300 RKLSGASASVSKDKDGKKKWIFRRGSSNKDDKAPPNAGEEEDVEGMRVDYYLVIFLKFIA 359

Query: 86  SVIPTIEYDFTQNF 99
           S++PTIE D T +F
Sbjct: 360 SIVPTIEVDSTTSF 373



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 26/31 (83%)

Query: 206 GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
            ++++ RTYD+ ITYDK+YQTP +WL GY+E
Sbjct: 206 ANLLQVRTYDVMITYDKFYQTPAIWLLGYDE 236


>gi|395333045|gb|EJF65423.1| hypothetical protein DICSQDRAFT_133041 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 366

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 10/108 (9%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            V EYL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  GD SKA+ YLP +KQ+
Sbjct: 10  AVREYLSPVLKESKFKEHGRITPEEFVAAGDFLAYKFPVWSWEKGDASKARDYLPADKQY 69

Query: 327 LITKNVPCPRRCKQIDYC---EEKQKIIENEQDEEG-------WVDTH 364
           L+T+ VPC RR   + Y    E+ ++++     ++G       WV+TH
Sbjct: 70  LLTRGVPCLRRASTLAYTDADEDAERLLSFADPKDGVAGGAEEWVETH 117



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 42/129 (32%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG----- 67
           PLT  Q+++DVS D+A KTVT+E  PH      AS+HPC+HA VMKK+IE + +G     
Sbjct: 238 PLTPSQIFQDVSADHAFKTVTIEPFPHSASLQAASVHPCKHASVMKKVIERMNQGIEEQQ 297

Query: 68  --------------------------------GGE-----LGVHMYLIIFLKFVQSVIPT 90
                                            GE     + V +YL++FLKF+ S++PT
Sbjct: 298 AARRGATGKDGKQKKWLFRRASGNGKDDKAVSAGEEEVEGMRVDLYLVVFLKFIASIVPT 357

Query: 91  IEYDFTQNF 99
           IE D T +F
Sbjct: 358 IEVDSTASF 366



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 28/31 (90%)

Query: 206 GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 204 GNLLQVRTYDVMITYDKYYQTPRIWLVGYDE 234



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 68  GGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHP 123
           G  L V  Y  +I + K+ Q+  I  + YD      T  Q+++DVS D+A KTVT+E  P
Sbjct: 204 GNLLQVRTYDVMITYDKYYQTPRIWLVGYDENGTPLTPSQIFQDVSADHAFKTVTIEPFP 263

Query: 124 HLPGPPMASIHPCR 137
           H      AS+HPC+
Sbjct: 264 HSASLQAASVHPCK 277


>gi|224071495|ref|XP_002303487.1| predicted protein [Populus trichocarpa]
 gi|222840919|gb|EEE78466.1| predicted protein [Populus trichocarpa]
          Length = 315

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 219 ESRMLLEPELVLEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 277

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKFV SVIPTIEYD+T +F
Sbjct: 278 VEPEVDKYLFLFLKFVASVIPTIEYDYTMDF 308



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 2/100 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EF+ AGD+LV  CPTW W SG+ SK K YLP  KQF
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPSKRKPYLPAEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           LIT+NVPC RR   +  DY     +++ + +D +GW+ TH
Sbjct: 73  LITRNVPCLRRAASVEEDYEAAGGEVLLDNEDNDGWLATH 112



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 7/86 (8%)

Query: 162 DDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYD 221
           ++E+  DM DFE+   L E DP+        Q+    A +  +  +I+RTRTYD+ ITYD
Sbjct: 151 EEEDIPDMADFEDPDNLIESDPATL------QTTYLVAHEPDDDDNILRTRTYDVSITYD 204

Query: 222 KYYQTPRLWLYGYNE-RFKGKENLVL 246
           KYYQTPR+WL GY+E R   +  LVL
Sbjct: 205 KYYQTPRVWLTGYDESRMLLEPELVL 230



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 229 VLEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 261


>gi|217072932|gb|ACJ84826.1| unknown [Medicago truncatula]
 gi|388518803|gb|AFK47463.1| unknown [Medicago truncatula]
          Length = 310

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   ASIHPCRH  VMKKII+ ++  G
Sbjct: 214 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HASIHPCRHGAVMKKIIDVLMSRG 272

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 273 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 303



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EF+ AGD+LV  CPTW W SG+ SK KSYLP  KQF
Sbjct: 13  GTVERITGHRTVSAFKEKGVLSVSEFIIAGDNLVAKCPTWSWESGEPSKRKSYLPSEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   I  +Y     +++ ++++ +GW+ TH   + T  D
Sbjct: 73  LITRNVPCLRRAASIEEEYEAAGGEVLLDDEENDGWLATHGKPKETKSD 121



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 12/100 (12%)

Query: 148 QSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD 207
           +S  K  S+    +DDE+  DME+F+E   + E DPS   +  E      P  D     +
Sbjct: 137 KSSVKQTSSHTGGEDDEDIPDMEEFKEYDNIIETDPSTYLVAHE------PDDD-----N 185

Query: 208 IVRTRTYDLHITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           I+RTRTYD+ ITYDKYYQTPR+WL GY+E R   +  LVL
Sbjct: 186 ILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVL 225



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   ASIHPCR
Sbjct: 224 VLEDVSQDHARKTVTIEDHPHLPG-KHASIHPCR 256


>gi|388493764|gb|AFK34948.1| unknown [Medicago truncatula]
          Length = 310

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   ASIHPCRH  VMKKII+ ++  G
Sbjct: 214 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HASIHPCRHGAVMKKIIDVLMSRG 272

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 273 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 303



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EF+ AGD+LV  CPTW W SG+ SK KSYLP  KQF
Sbjct: 13  GTVERITGHRTVSAFKEKGVLSVSEFIIAGDNLVAKCPTWSWESGEPSKRKSYLPSEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   I  +Y     +++ + ++ +GW+ TH   + T  D
Sbjct: 73  LITRNVPCLRRAASIEEEYEAAGGEVLLDGEENDGWLATHGKPKETKSD 121



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 12/100 (12%)

Query: 148 QSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD 207
           +S  K  S+    +DDE+  DME+F+E   + E DPS           +  A    +  +
Sbjct: 137 KSSVKQTSSHTGGEDDEDIPDMEEFKEYDNIIETDPS-----------TYLAAHEPDDDN 185

Query: 208 IVRTRTYDLHITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           I+RTRTYD+ ITYDKYYQTPR+WL GY+E R   +  LVL
Sbjct: 186 ILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVL 225



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   ASIHPCR
Sbjct: 224 VLEDVSQDHARKTVTIEDHPHLPG-KHASIHPCR 256


>gi|328766808|gb|EGF76860.1| hypothetical protein BATDEDRAFT_14494 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 318

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 4/113 (3%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLIT 329
           EY  P+LK SKF+ETGV+TPEEFVAAGD LV  CPTW W++G+ +K K YLP  KQ+L+T
Sbjct: 7   EYFNPLLKNSKFKETGVLTPEEFVAAGDFLVFKCPTWSWSAGEPTKTKDYLPVGKQYLVT 66

Query: 330 KNVPCPRRCKQIDYCEEK-QKIIENEQDEE---GWVDTHHYDETTGKDIAIED 378
           +NVPC  R K ++Y E+  ++ ++   D+    GW  T +  + T      ED
Sbjct: 67  RNVPCLSRVKAMEYDEDDFEETLDGGADDTADGGWALTENLAQLTTAKEGNED 119



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 3/86 (3%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG-- 68
           R PLT  Q++ED+SQD+A KTVT+E+HPH     +ASIHPC+HA VMK+I++ + E G  
Sbjct: 202 RRPLTTTQVFEDISQDHAHKTVTIEAHPH-ENLTLASIHPCKHANVMKRILDHMEETGEN 260

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYD 94
            EL V  YL++FLKF+ +V+PT++YD
Sbjct: 261 TELRVDQYLMLFLKFMSAVLPTMDYD 286



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 187 NIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           N P      S+  GD      I++TRTYD+ ITYDKYYQTPR+WL+GY+E
Sbjct: 151 NDPGALVLESNKTGDCDAADKILKTRTYDMAITYDKYYQTPRVWLFGYDE 200



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T  Q++ED+SQD+A KTVT+E+HPH     +ASIHPC+
Sbjct: 205 LTTTQVFEDISQDHAHKTVTIEAHPH-ENLTLASIHPCK 242


>gi|302841946|ref|XP_002952517.1| autophagy protein [Volvox carteri f. nagariensis]
 gi|300262156|gb|EFJ46364.1| autophagy protein [Volvox carteri f. nagariensis]
          Length = 335

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 71/91 (78%), Gaps = 3/91 (3%)

Query: 9   KSRAPLTVDQ---MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVL 65
           +SR PL   Q   + EDVS+++A+KT+T++ HPHLPG   ASIHPCRHAE MK++ + ++
Sbjct: 239 ESRKPLLPHQGIGVMEDVSEEHARKTITLDPHPHLPGLSAASIHPCRHAETMKRLADKLV 298

Query: 66  EGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
           EGG +  V +YL++FLKF+ SV+PTI+YD+T
Sbjct: 299 EGGRDFRVDLYLVLFLKFIASVVPTIQYDYT 329



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 60/98 (61%), Gaps = 1/98 (1%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
             E + P L +S+F E  V+TPEEFVAAGD+LVH CPTW W  GD  K KSYL   KQFL
Sbjct: 14  AVEKVAPPLSKSQFEEKRVLTPEEFVAAGDYLVHACPTWSWEGGDPKKRKSYLSAEKQFL 73

Query: 328 ITKNVPCPRRCKQIDYCEEKQKIIENEQ-DEEGWVDTH 364
           +T+NVPC RR   +        + E     EEGWV TH
Sbjct: 74  VTRNVPCLRRATDVAGGSSYNPMSEFALPGEEGWVATH 111



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/33 (69%), Positives = 28/33 (84%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           +IVRTRTYDL+ITYD+YYQ PR WL G++E  K
Sbjct: 210 NIVRTRTYDLYITYDQYYQVPRFWLVGFDESRK 242



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 29/34 (85%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVS+++A+KT+T++ HPHLPG   ASIHPCR
Sbjct: 252 VMEDVSEEHARKTITLDPHPHLPGLSAASIHPCR 285


>gi|336371969|gb|EGO00309.1| putative E2-like enzyme that plays a role in formation of
           Atg8p-phosphatidylethanolamine conjugates [Serpula
           lacrymans var. lacrymans S7.3]
 gi|336384719|gb|EGO25867.1| hypothetical protein SERLADRAFT_466603 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 377

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 71/109 (65%), Gaps = 13/109 (11%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            V +YL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  GD SKA+ YLP +KQ+
Sbjct: 10  AVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLAYKFPVWTWEKGDISKARDYLPTDKQY 69

Query: 327 LITKNVPCPRRCKQIDYC---EEKQKIIE--------NEQDEEGWVDTH 364
           L+T+ VPC RR   + Y    E+ ++++         NE DE  WV+TH
Sbjct: 70  LVTRGVPCLRRATSLAYTDADEDAERLLSFGDTSATGNEADE--WVETH 116



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 45/132 (34%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG----- 67
           PLT  Q+++DVS D+A KTVT+E+ PH      AS+HPC+HA VMKK+IE +  G     
Sbjct: 246 PLTPPQIFQDVSADHALKTVTIEAFPHSATLQAASVHPCKHASVMKKVIERMNAGVVEEQ 305

Query: 68  ----------------------------GGE------------LGVHMYLIIFLKFVQSV 87
                                       GG+            + V  YL++FLKF+ S+
Sbjct: 306 LAQRKYAGGASPKDTKENKKKWGFGRKSGGKDDKPVEDEEADGMRVDFYLVVFLKFIASI 365

Query: 88  IPTIEYDFTQNF 99
           +PTIE D T  F
Sbjct: 366 VPTIEVDSTTAF 377



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 4/52 (7%)

Query: 189 PPEKQSPSSPAGDSQEC----GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  K  PSS   D  +     G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 191 PKAKGIPSSGVLDVSQVEVAKGNLLQVRTYDVMITYDKYYQTPRIWLIGYDE 242



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%)

Query: 36  SHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELGVHMY--LIIFLKFVQS-VIPTIE 92
           + P   G P + +      EV K         G  L V  Y  +I + K+ Q+  I  I 
Sbjct: 189 AAPKAKGIPSSGVLDVSQVEVAK---------GNLLQVRTYDVMITYDKYYQTPRIWLIG 239

Query: 93  YDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           YD      T  Q+++DVS D+A KTVT+E+ PH      AS+HPC+
Sbjct: 240 YDENGTPLTPPQIFQDVSADHALKTVTIEAFPHSATLQAASVHPCK 285


>gi|359807432|ref|NP_001241390.1| autophagy-related protein 3-like [Glycine max]
 gi|255645508|gb|ACU23249.1| unknown [Glycine max]
 gi|255647436|gb|ACU24182.1| unknown [Glycine max]
          Length = 313

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   ASIHPCRH  VMKKII+ ++  G
Sbjct: 217 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HASIHPCRHGAVMKKIIDVLMSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 306



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD  K K YLPP KQF
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWSWESGDPGKRKPYLPPEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   +  +Y     +++ +++D +GW+ TH   + T  D
Sbjct: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKSD 121



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 9/84 (10%)

Query: 164 EEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKY 223
           E+  DM +F+++        ++ N P   QS    A +  +  +I+RTRTYD+ ITYDKY
Sbjct: 153 EDIPDMAEFDDTS-------NVENDPATLQSTYLVAHEPDD-DNILRTRTYDISITYDKY 204

Query: 224 YQTPRLWLYGYNE-RFKGKENLVL 246
           YQTPR+WL GY+E R   +  LVL
Sbjct: 205 YQTPRVWLTGYDESRMLLQPELVL 228



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   ASIHPCR
Sbjct: 227 VLEDVSQDHARKTVTIEDHPHLPG-KHASIHPCR 259


>gi|402224365|gb|EJU04428.1| hypothetical protein DACRYDRAFT_76878 [Dacryopinax sp. DJM-731 SS1]
          Length = 382

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 80/132 (60%), Gaps = 9/132 (6%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +++V+     V +YL+PVL+ESKF+E G +TPEEFVAAGD L +  P W W  GD ++ +
Sbjct: 1   MHAVQTQFWAVRDYLSPVLRESKFKEHGRITPEEFVAAGDFLTYKFPVWTWEKGDGTRVR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYCEEKQ------KIIENEQDEEGWVDTHHYDETTG 371
            +LP +KQFL+T+NVPC RR   + Y +E++         +    E+ WV TH      G
Sbjct: 61  DFLPKDKQFLMTRNVPCLRRATTLAYTDEQEDAEKMLSFTDGGDKEDEWVQTHAGRAGEG 120

Query: 372 KDIAIEDKISEI 383
             +A   +IS+I
Sbjct: 121 DGVA---EISDI 129



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 63/145 (43%), Gaps = 54/145 (37%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG- 67
           +S  PLT   +++DVS D+A KTVT+E  PH      AS+HPC+HA VMKK+IE +  G 
Sbjct: 238 ESGNPLTPSHVFQDVSADHAFKTVTIEPFPHSTTLTAASVHPCKHANVMKKVIERMNAGI 297

Query: 68  ----------------------------------GGE-------------------LGVH 74
                                             GG                    + V 
Sbjct: 298 IAEEQKRLGISNAKPDKDGKSGRRWLGGMVRRVTGGSGTESPSTGSETPASEDAEGMRVD 357

Query: 75  MYLIIFLKFVQSVIPTIEYDFTQNF 99
            YL++FLKF+ S++PTIE D T  F
Sbjct: 358 FYLVVFLKFIASIVPTIEVDSTTAF 382



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 27/30 (90%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           ++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 209 NLLQVRTYDVMITYDKYYQTPRIWLLGYDE 238



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 71  LGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLP 126
           L V  Y  +I + K+ Q+  I  + YD + N  T   +++DVS D+A KTVT+E  PH  
Sbjct: 211 LQVRTYDVMITYDKYYQTPRIWLLGYDESGNPLTPSHVFQDVSADHAFKTVTIEPFPHST 270

Query: 127 GPPMASIHPCR 137
               AS+HPC+
Sbjct: 271 TLTAASVHPCK 281


>gi|323507713|emb|CBQ67584.1| related to AUT1-essential for autophagocytosis [Sporisorium
           reilianum SRZ2]
          Length = 447

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 19/177 (10%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +N+++     V EYL+PVL+ESKF+E G +TP+EFVAAGD L +  PTWQW +G  SKA+
Sbjct: 1   MNALQTHFWAVREYLSPVLRESKFKEHGRITPDEFVAAGDFLSYKFPTWQWCAGSASKAR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQID------YCEEKQKIIENEQ------DEEGWVDTHH 365
            YLP +KQFLI+  VP  RR  QI+        ++ +K++  ++      +++ WV TH 
Sbjct: 61  DYLPKDKQFLISCGVPSLRRVSQIEKGVGVGVTDDDEKLMSFDEGGADAAEDDQWVATHF 120

Query: 366 YDETTGKDIAIED--KISEISLDASTGWVDTHHYDETTGKDIAIEDKISEISLDATT 420
            D+ TG      D   I +I  DA+      H   E    D+A   +++ +S+ A++
Sbjct: 121 DDQQTGSASRAADMLDIPDIGEDAAA---PEHQLTEGQEDDLAA--RVAGVSIAASS 172



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 18/78 (23%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPH--------------LPGPPMA 46
           +G +  GV    PL   Q++EDVS DYA+KTVT+E  PH                G   A
Sbjct: 259 VGYDEHGV----PLKPAQIFEDVSSDYAQKTVTIELFPHGHAGPDSSATSSASAVGVATA 314

Query: 47  SIHPCRHAEVMKKIIETV 64
           SIHPC+HA VMKK+IE +
Sbjct: 315 SIHPCKHASVMKKVIERM 332



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%)

Query: 175 SGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           +G ++E+D      PP   + +S +  + + G ++  R YD  ITYDKYYQTPR+WL GY
Sbjct: 202 AGGVEEEDDPATAAPPALTTAASGSTSAADNGKLLSVRKYDCIITYDKYYQTPRMWLVGY 261

Query: 235 NE 236
           +E
Sbjct: 262 DE 263



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 14/49 (28%)

Query: 103 QMYEDVSQDYAKKTVTMESHPH--------------LPGPPMASIHPCR 137
           Q++EDVS DYA+KTVT+E  PH                G   ASIHPC+
Sbjct: 272 QIFEDVSSDYAQKTVTIELFPHGHAGPDSSATSSASAVGVATASIHPCK 320


>gi|116787862|gb|ABK24672.1| unknown [Picea sitchensis]
          Length = 310

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + +DVSQD+A+KTVT+E HPH+ G   ASIHPCRH  VMKKII+ ++  G
Sbjct: 214 ESRMLLQPELVLDDVSQDHARKTVTIEDHPHMSGK-HASIHPCRHGAVMKKIIDVLMSNG 272

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           GE  V  YL +FLKF+ SVIPTIEYD+T +F +
Sbjct: 273 GEPEVDKYLFLFLKFLASVIPTIEYDYTMDFAL 305



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 64/101 (63%), Gaps = 7/101 (6%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++ +EFV AGD+LV  CPTW W SG+ SK KSYLP NKQ+
Sbjct: 13  GAVERITGPRTVSAFKEKGVLSVDEFVQAGDNLVAKCPTWSWESGESSKRKSYLPSNKQY 72

Query: 327 LITKNVPCPRRCKQIDYCEEKQK---IIENEQDEEGWVDTH 364
           LIT+NVPC RR   ++   E      +IE+    +GW+ TH
Sbjct: 73  LITRNVPCFRRASDLEEEYEAAGGEFLIED----DGWLATH 109



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 8/87 (9%)

Query: 161 DDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITY 220
           +D+EE  DM ++EE    +E D   A + P     + P  D     +I+ TRTYD+ ITY
Sbjct: 146 NDEEEIPDMAEYEEPD--NEDDIDAATLQPPYLVANEPDDD-----NILHTRTYDVSITY 198

Query: 221 DKYYQTPRLWLYGYNE-RFKGKENLVL 246
           DKYYQTPR+WL GY+E R   +  LVL
Sbjct: 199 DKYYQTPRVWLTGYDESRMLLQPELVL 225



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 28/34 (82%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + +DVSQD+A+KTVT+E HPH+ G   ASIHPCR
Sbjct: 224 VLDDVSQDHARKTVTIEDHPHMSG-KHASIHPCR 256


>gi|414145390|pdb|3VX8|B Chain B, Crystal Structure Of Arabidopsis Thaliana Atg7ntd-Atg3
           Complex
 gi|414145391|pdb|3VX8|C Chain C, Crystal Structure Of Arabidopsis Thaliana Atg7ntd-Atg3
           Complex
          Length = 292

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 196 ESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 254

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E  V  YL +FLKF+ SVIPTIEYD+T +F +
Sbjct: 255 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDL 287



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 2/95 (2%)

Query: 281 FRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCKQ 340
           F+E GV++  EFV AGD+LV  CPTW W SGD SK K YLP +KQFLIT+NVPC RR   
Sbjct: 6   FKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQFLITRNVPCLRRAAS 65

Query: 341 I--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           +  DY     +++ +++D +GW+ TH   +  GK+
Sbjct: 66  VAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKGKE 100



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A+     N  QS       EE+DD      DME+F+E+  + E DP  A +         
Sbjct: 109 ALDINEKNTIQSIPTYFGGEEDDD----IPDMEEFDEADNVVENDP--ATLQSTYLVAHE 162

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  D+     I+RTRTYDL ITYDKYYQTPR+WL GY+E
Sbjct: 163 PDDDN-----ILRTRTYDLSITYDKYYQTPRVWLTGYDE 196



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 206 VMEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 238


>gi|110740691|dbj|BAE98447.1| autophagocytosis protein - like [Arabidopsis thaliana]
          Length = 313

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 217 ESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E  V  YL +FLKF+ SVIPTIEYD+T +F +
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDL 308



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD SK K YLP +KQF
Sbjct: 13  GTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   +  DY     +++ +++D +GW+ TH   +  GK+
Sbjct: 73  LITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKGKE 121



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A+     N  QS       EE+DD      DME+F+E+  + E DP  A +         
Sbjct: 130 ALDINEKNTIQSIPTYFGGEEDDD----IPDMEEFDEADNVVENDP--ATLQSTYLVAHE 183

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  D     +I+RTRTYDL ITYD+YYQTPR+WL GY+E
Sbjct: 184 PDDD-----NILRTRTYDLSITYDEYYQTPRVWLTGYDE 217



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 227 VMEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 259


>gi|18424474|ref|NP_568934.1| autophagy-related protein 3 [Arabidopsis thaliana]
 gi|147742948|sp|Q0WWQ1.2|ATG3_ARATH RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3;
           Short=AtAPG3; Short=Protein autophagy 3
 gi|19912141|dbj|BAB88382.1| autophagy 3 [Arabidopsis thaliana]
 gi|89000923|gb|ABD59051.1| At5g61500 [Arabidopsis thaliana]
 gi|332010093|gb|AED97476.1| autophagy-related protein 3 [Arabidopsis thaliana]
          Length = 313

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 217 ESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E  V  YL +FLKF+ SVIPTIEYD+T +F +
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDL 308



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD SK K YLP +KQF
Sbjct: 13  GTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   +  DY     +++ +++D +GW+ TH   +  GK+
Sbjct: 73  LITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKGKE 121



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A+     N  QS       EE+DD      DME+F+E+  + E DP  A +         
Sbjct: 130 ALDINEKNTIQSIPTYFGGEEDDD----IPDMEEFDEADNVVENDP--ATLQSTYLVAHE 183

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  D     +I+RTRTYDL ITYDKYYQTPR+WL GY+E
Sbjct: 184 PDDD-----NILRTRTYDLSITYDKYYQTPRVWLTGYDE 217



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 227 VMEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 259


>gi|21595613|gb|AAM66117.1| autophagocytosis protein-like [Arabidopsis thaliana]
          Length = 313

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 217 ESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 306



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++   FV AGD+LV  CPTW W SGD SK K YLP +KQF
Sbjct: 13  GTVERITGPRTISAFKEKGVLSVSXFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   +  DY     +++ +++D +GW+ TH   +  GK+
Sbjct: 73  LITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDKGKE 121



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A+     N  QS       EE+DD      DME+F+E+  + E DP  A +         
Sbjct: 130 ALDINEKNTIQSIPTYFGGEEDDD----IPDMEEFDEADNVVENDP--ATLQSTYLVAHE 183

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  D     +I+RTRTYDL ITYDKYYQTPR+WL GY+E
Sbjct: 184 PDDD-----NILRTRTYDLSITYDKYYQTPRVWLTGYDE 217



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 227 VMEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 259


>gi|297797109|ref|XP_002866439.1| autophagy 3 [Arabidopsis lyrata subsp. lyrata]
 gi|297312274|gb|EFH42698.1| autophagy 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 217 ESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E  V  YL +FLKF+ SVIPTIEYD+T +F +
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDL 308



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 2/100 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD SK K YLP +KQF
Sbjct: 13  GTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDPSKRKPYLPSDKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           LIT+NVPC RR   +  DY     +++ +++D +GW+ TH
Sbjct: 73  LITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATH 112



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A+     N  QS       EE+DD      DME+F+E+  + E DP  A +         
Sbjct: 130 ALDINEKNTIQSIPTYFGGEEDDD----IPDMEEFDEADNVVENDP--ATLQSTYLVAHE 183

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P  D     +I+RTRTYDL ITYDKYYQTPR+WL GY+E
Sbjct: 184 PDDD-----NILRTRTYDLSITYDKYYQTPRVWLTGYDE 217



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 227 VMEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 259


>gi|38260612|gb|AAR15430.1| autophagocytosis protein [Sisymbrium irio]
          Length = 312

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 213 ESRMLLQPELVMEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMSRG 271

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E  V  YL +FLKF+ SVIPTIEYD+T +F +
Sbjct: 272 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDL 304



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 2/106 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYL 320
           + G   G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD SK K YL
Sbjct: 7   IHGAFKGAVERMTGPRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDPSKRKPYL 66

Query: 321 PPNKQFLITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           P +KQFLIT+NVPC RR   +  DY     +++ +++D +GW+ TH
Sbjct: 67  PSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATH 112



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 15/99 (15%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A++    +  Q   K    EEEDD      DM +F+E          I N P   QS + 
Sbjct: 130 ALEINERDTIQPKPKYAGGEEEDD----IPDMAEFDE----------IDNDPATLQS-NL 174

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
                Q+  +I+RTRTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 175 LVAHQQDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE 213



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 223 VMEDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 255


>gi|393245292|gb|EJD52803.1| hypothetical protein AURDEDRAFT_111354 [Auricularia delicata
           TFB-10046 SS5]
          Length = 380

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 78/115 (67%), Gaps = 9/115 (7%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +++++     V +YL+PVL+ESKF+E+G +TPEEFVAAGD L +  P W W  G+ SKAK
Sbjct: 1   MHAIQSQFWAVRDYLSPVLRESKFKESGCITPEEFVAAGDFLAYKFPVWSWEKGEASKAK 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKII-----ENEQDEEGWVDTH 364
            +LPP+KQ+L+ + VPC RR   + Y    E+ +++I     +  +D+E WV+TH
Sbjct: 61  DFLPPDKQYLVHRGVPCLRRASSLAYTDAQEDAERLISMSGGDALKDDE-WVETH 114



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 53/140 (37%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV-------- 64
           PLT  Q+++D+S ++A+KTVT+E+ PH      AS+HPC+HA VMKK+IE +        
Sbjct: 241 PLTHKQVFQDISAEHAQKTVTIEAFPHSATLSCASVHPCKHASVMKKVIERMNAHVVEEQ 300

Query: 65  ----------------LEGGGE-----------------------------LGVHMYLII 79
                            EGGG+                             + V  YL++
Sbjct: 301 RKLAGAPGGAGKVAGAKEGGGKRKWLLRKVTGDSGKSSPAPPGDDGDDVEGMRVDFYLVV 360

Query: 80  FLKFVQSVIPTIEYDFTQNF 99
           FLKF+ S++PTIE D T  F
Sbjct: 361 FLKFIASIVPTIEVDSTTAF 380



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 29/32 (90%)

Query: 206 GDIVRTRTYDLHITYDKYYQTPRLWLYGYNER 237
           G++++ RTYD+ ITYDKYYQTPR+WL GY+E+
Sbjct: 207 GNLLQVRTYDVMITYDKYYQTPRVWLLGYDEK 238



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 68  GGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHP 123
           G  L V  Y  +I + K+ Q+  +  + YD      T  Q+++D+S ++A+KTVT+E+ P
Sbjct: 207 GNLLQVRTYDVMITYDKYYQTPRVWLLGYDEKGTPLTHKQVFQDISAEHAQKTVTIEAFP 266

Query: 124 HLPGPPMASIHPCR 137
           H      AS+HPC+
Sbjct: 267 HSATLSCASVHPCK 280


>gi|71003271|ref|XP_756316.1| hypothetical protein UM00169.1 [Ustilago maydis 521]
 gi|46096321|gb|EAK81554.1| hypothetical protein UM00169.1 [Ustilago maydis 521]
          Length = 439

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 87/154 (56%), Gaps = 18/154 (11%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +N+++     V EYL+PVL+ESKF+E G +TP+EFVAAGD L +  PTWQW +G  SKA+
Sbjct: 1   MNALQTHFWAVREYLSPVLRESKFKEHGRITPDEFVAAGDFLSYKFPTWQWCAGSSSKAR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIE 377
            YLP +KQFLI+  VP  RR  QI    EK   +  + D+E  +    + E  G D   +
Sbjct: 61  DYLPKDKQFLISCGVPSLRRVSQI----EKGVGVGVKDDDEKLMS---FGEEGGADAPED 113

Query: 378 DKISEISLDASTGWVDTHHYDETTGKDIAIEDKI 411
           D+           WV TH  D+ TG    + D +
Sbjct: 114 DQ-----------WVATHFDDQQTGSSSQVADML 136



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 18/78 (23%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPH--------------LPGPPMA 46
           +G +  GV    PL   Q++EDVS DYA+KTVT+E  PH                G   A
Sbjct: 262 VGYDEHGV----PLKPAQIFEDVSSDYAQKTVTIEPFPHGHAGPDSSVTSSASAVGVATA 317

Query: 47  SIHPCRHAEVMKKIIETV 64
           SIHPC+HA VMKK+IE +
Sbjct: 318 SIHPCKHASVMKKVIERM 335



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 175 SGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           +G  +++DP+ A  PP   +  +    + + G ++  R YD  ITYDKYYQTPR+WL GY
Sbjct: 206 AGVHEDEDPATA-APPTHNAARTGWASAGDNGKLLSVRKYDCIITYDKYYQTPRMWLVGY 264

Query: 235 NE 236
           +E
Sbjct: 265 DE 266



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 14/49 (28%)

Query: 103 QMYEDVSQDYAKKTVTMESHPH--------------LPGPPMASIHPCR 137
           Q++EDVS DYA+KTVT+E  PH                G   ASIHPC+
Sbjct: 275 QIFEDVSSDYAQKTVTIEPFPHGHAGPDSSVTSSASAVGVATASIHPCK 323


>gi|389740075|gb|EIM81267.1| hypothetical protein STEHIDRAFT_86600 [Stereum hirsutum FP-91666
           SS1]
          Length = 372

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 13/109 (11%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            V +YL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  G+ SKA+ +LPP+KQ+
Sbjct: 10  AVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLTYKFPVWTWEKGEASKARDFLPPDKQY 69

Query: 327 LITKNVPCPRRCKQIDYC---EEKQKIIE--------NEQDEEGWVDTH 364
           L+T+ VPC RR   + Y    E+ ++++         +E DE  WV+TH
Sbjct: 70  LVTRGVPCLRRATSLAYTDADEDAERLLNFGDSSATGDEADE--WVETH 116



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 42/133 (31%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLT  Q+++DVS D+A KTVT+E+ P+      AS+HPC+HA VMKK+IE +  G 
Sbjct: 240 ENRTPLTPSQIFQDVSADHAFKTVTIEAFPNSSTLQAASVHPCKHASVMKKVIERMNAGV 299

Query: 69  GE------------------------------------------LGVHMYLIIFLKFVQS 86
            E                                          + V  YL++FLKF+ S
Sbjct: 300 VEEQKAAQRKSGGSKDKKKWFGRRGSGNGKIDPAPTGEEEEVEGMRVDFYLVVFLKFIAS 359

Query: 87  VIPTIEYDFTQNF 99
           ++PTIE D T  F
Sbjct: 360 IVPTIEVDSTTAF 372



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 4/55 (7%)

Query: 186 ANIPPEKQSPSSPAGDSQEC----GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           A   P++ +P+S   D+ E     G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 186 ATAAPKRTAPTSNVIDASEIEVAKGNLLQVRTYDVMITYDKYYQTPRIWLLGYDE 240



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 46  ASIHPCRHAEVMKKIIETVLE--GGGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-F 99
           A+  P R A     I  + +E   G  L V  Y  +I + K+ Q+  I  + YD  +   
Sbjct: 186 ATAAPKRTAPTSNVIDASEIEVAKGNLLQVRTYDVMITYDKYYQTPRIWLLGYDENRTPL 245

Query: 100 TVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           T  Q+++DVS D+A KTVT+E+ P+      AS+HPC+
Sbjct: 246 TPSQIFQDVSADHAFKTVTIEAFPNSSTLQAASVHPCK 283


>gi|225193980|gb|ACN81639.1| ATG3 protein [Triticum aestivum]
          Length = 317

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/91 (56%), Positives = 68/91 (74%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL  + +++D+SQD+A KTVT+E HPHL     AS+HPC+HA VMKKII+ ++  G
Sbjct: 220 EARMPLKPELVFQDISQDHAHKTVTIEDHPHLLVGQHASVHPCKHAAVMKKIIDVIVSQG 279

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           G   V  YL IFLKF+ SVIPTIEYD+T +F
Sbjct: 280 GAPEVDKYLFIFLKFMASVIPTIEYDYTMDF 310



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLP +KQF
Sbjct: 14  GTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEAGDPSKRKPYLPSDKQF 73

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   ++        + ++++++D EGW+ TH
Sbjct: 74  LVTRNVPCLRRAVAVEEEYDAAGAEVVLDDDEDGEGWLATH 114



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 11/90 (12%)

Query: 158 EEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLH 217
           E+ D++E+  DM+ +E++G     D S A   P       P  D     +I+ TRTYD+ 
Sbjct: 152 EKPDEEEDIPDMDTYEDTG-----DHSTATPQPSYFVAEEPDDD-----NILLTRTYDVS 201

Query: 218 ITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           ITYDKYYQTPR+WL GY+E R   K  LV 
Sbjct: 202 ITYDKYYQTPRVWLTGYDEARMPLKPELVF 231



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 27/34 (79%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           +++D+SQD+A KTVT+E HPHL     AS+HPC+
Sbjct: 230 VFQDISQDHAHKTVTIEDHPHLLVGQHASVHPCK 263


>gi|255081801|ref|XP_002508119.1| predicted protein [Micromonas sp. RCC299]
 gi|226523395|gb|ACO69377.1| predicted protein [Micromonas sp. RCC299]
          Length = 308

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 2/108 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M ++ + V     GVAE L      S F E GVVTPEEFV AGD+LV  CPTW W  GD 
Sbjct: 1   MDALKHKVHTAYKGVAESLMTTRTTSAFLEKGVVTPEEFVVAGDYLVEQCPTWSWQGGDA 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
             AKSYLP +KQFL+T+NVPC +R + ++    K++ +  E  +EGWV
Sbjct: 61  KSAKSYLPEDKQFLVTRNVPCLKRARAMEEYAGKEEHLSGE--DEGWV 106



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 2/91 (2%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R  L   +  ED+S ++AKKTVT++ HPH    P ASIHPC+HA VMKK+IE+ + G   
Sbjct: 219 RRALDPTKALEDISAEHAKKTVTIDPHPHT-SVPSASIHPCKHAPVMKKLIES-MGGDAA 276

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
             V  YL +FLKF+ SV+PTIEYD+T + ++
Sbjct: 277 PSVEHYLFVFLKFIASVVPTIEYDYTASASL 307



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)

Query: 179 DEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERF 238
           DE+D + A +P  +   +    D  + G I++TRTYDL ITYDKYYQTPR+WL GY+ER 
Sbjct: 163 DEEDDASA-LPSSRAVTTVTTAD--DAGHILKTRTYDLSITYDKYYQTPRVWLNGYDERR 219

Query: 239 KG 240
           + 
Sbjct: 220 RA 221



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 1/35 (2%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           +  ED+S ++AKKTVT++ HPH    P ASIHPC+
Sbjct: 226 KALEDISAEHAKKTVTIDPHPHT-SVPSASIHPCK 259


>gi|403345812|gb|EJY72286.1| Autophagy-related protein 3 [Oxytricha trifallax]
          Length = 297

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 1/85 (1%)

Query: 18  QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELGVHMYL 77
           +++ED+  DYAKKTVTME HPHL G   ASIHPC HA+VMKKII+T+   GG   VH  L
Sbjct: 214 EVFEDIMADYAKKTVTMEPHPHL-GMKQASIHPCNHAKVMKKIIDTIQSNGGTPQVHQSL 272

Query: 78  IIFLKFVQSVIPTIEYDFTQNFTVD 102
            +FLKF+ SV+PTIEYDFT +  +D
Sbjct: 273 FVFLKFISSVVPTIEYDFTIDLELD 297



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 20/122 (16%)

Query: 266 LGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQ------------WASGDE 313
           + +A     VLK+SKF E GV+TPEEF+ AGD L H CPTW+            W +GD 
Sbjct: 1   MSIATPFMGVLKDSKFLEQGVLTPEEFMIAGDQLTHKCPTWRQLCFYFQVIVFSWEAGDP 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHH---YDETT 370
                 LP  KQFL+TK+VPC +R K++   E K++ +E+     GWV+T      D TT
Sbjct: 61  KLRNKNLPEEKQFLVTKHVPCSKRIKELQGEETKERDLED-----GWVETDSPMVKDSTT 115

Query: 371 GK 372
           GK
Sbjct: 116 GK 117



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/27 (81%), Positives = 23/27 (85%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           R RTYDL ITYD YYQTPRLWL GY+E
Sbjct: 179 RVRTYDLSITYDFYYQTPRLWLLGYDE 205



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIK 140
           +++ED+  DYAKKTVTME HPHL G   ASIHPC   K
Sbjct: 214 EVFEDIMADYAKKTVTMEPHPHL-GMKQASIHPCNHAK 250


>gi|168022166|ref|XP_001763611.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685104|gb|EDQ71501.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 307

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R  L  + + EDVSQD+A+KTVT+E HPH+PG   ASIHPCRH  VMKKII+ +L  G
Sbjct: 213 ETRYLLQPELVLEDVSQDHARKTVTIEDHPHMPGK-HASIHPCRHGAVMKKIIDILLSRG 271

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
               V  YL IFLKFV SVIPTIEYD+T +F +
Sbjct: 272 VNPEVDKYLFIFLKFVASVIPTIEYDYTMDFEL 304



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV+TP+EF+ AGD+LV  CPTW W  GD +K K YLP  KQF
Sbjct: 13  GAVERMTSPRTVSAFKEKGVLTPDEFILAGDNLVSKCPTWSWEMGDPNKRKPYLPAEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYD 367
           LIT+NVPC RR   I  DY     +++ +  D+EGW+ TH  D
Sbjct: 73  LITRNVPCLRRASSIEEDYNAAGGEVLLDNDDDEGWLATHGID 115



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 10/89 (11%)

Query: 159 EDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHI 218
           +DD+DE+ LDM+D  +   ++  D ++         P   A + ++   I++TRTYD+ I
Sbjct: 145 QDDEDEDILDMDDVGDDNLVETDDSTL--------QPYLVAHEPED-DHILKTRTYDISI 195

Query: 219 TYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           TYDKYYQTPR+WL GY+E R+  +  LVL
Sbjct: 196 TYDKYYQTPRVWLTGYDETRYLLQPELVL 224



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPH+PG   ASIHPCR
Sbjct: 223 VLEDVSQDHARKTVTIEDHPHMPG-KHASIHPCR 255


>gi|302781290|ref|XP_002972419.1| hypothetical protein SELMODRAFT_97230 [Selaginella moellendorffii]
 gi|302804995|ref|XP_002984249.1| hypothetical protein SELMODRAFT_119789 [Selaginella moellendorffii]
 gi|300148098|gb|EFJ14759.1| hypothetical protein SELMODRAFT_119789 [Selaginella moellendorffii]
 gi|300159886|gb|EFJ26505.1| hypothetical protein SELMODRAFT_97230 [Selaginella moellendorffii]
          Length = 311

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + ++EDVSQD+A++TVT+E HPH+ G   AS+HPCRHA VMKKII  +L  G
Sbjct: 217 ESRMLLDPELVFEDVSQDHARQTVTIEDHPHMAGK-HASVHPCRHAPVMKKIIAILLSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E  V  YL +FLKF+ SVIPTIEYD+T  FTV
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMEFTV 308



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 2/98 (2%)

Query: 269 AEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLI 328
            E +T     S F E GV+TP EFV AGD+LV  CPTW W SGD SK K +LP +KQFLI
Sbjct: 15  VERITSPRTVSAFVEKGVLTPAEFVQAGDNLVAKCPTWSWESGDPSKQKGHLPKDKQFLI 74

Query: 329 TKNVPCPRRCKQIDYCEEKQ--KIIENEQDEEGWVDTH 364
           T+NVPC RR    +        +++ + +D EGW+ TH
Sbjct: 75  TRNVPCLRRAAAFEEEYAAAGGEVLLDGEDGEGWLATH 112



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 7/69 (10%)

Query: 168 DMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           DM DF+ S  L  +D +  + P              +  +I+RTRTYD+ ITYD+Y+Q P
Sbjct: 156 DMSDFDSSDNLVTRDETAVHAP-------YLIAHEPDDNNILRTRTYDISITYDQYFQVP 208

Query: 228 RLWLYGYNE 236
           R+WL GY+E
Sbjct: 209 RVWLTGYDE 217



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 29/34 (85%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++EDVSQD+A++TVT+E HPH+ G   AS+HPCR
Sbjct: 227 VFEDVSQDHARQTVTIEDHPHMAG-KHASVHPCR 259


>gi|256856191|dbj|BAI22685.1| autophagy protein ATG3 [Glycine max]
          Length = 313

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A KTVT+E HPHLPG   ASIHPCRH  VMKKII+ ++  G
Sbjct: 217 ESRMLLQPELVLEDVSQDHAHKTVTIEDHPHLPGK-HASIHPCRHGAVMKKIIDVLMSRG 275

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 276 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 306



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD  K K YLPP KQF
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWSWESGDPGKRKPYLPPEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   +  +Y     +++ +++D +GW+ TH   + T  D
Sbjct: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKSD 121



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 9/84 (10%)

Query: 164 EEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKY 223
           E+  DM +F+++        ++ N P   QS    A +  +  +I+RTRTYD+ ITYDKY
Sbjct: 153 EDIPDMAEFDDTS-------NVENDPATLQSTYLVAHEPDD-DNILRTRTYDVSITYDKY 204

Query: 224 YQTPRLWLYGYNE-RFKGKENLVL 246
           YQTPR+WL GY+E R   +  LVL
Sbjct: 205 YQTPRVWLTGYDESRMLLQPELVL 228



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 28/34 (82%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A KTVT+E HPHLPG   ASIHPCR
Sbjct: 227 VLEDVSQDHAHKTVTIEDHPHLPG-KHASIHPCR 259


>gi|390602359|gb|EIN11752.1| hypothetical protein PUNSTDRAFT_131907 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 393

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 11/120 (9%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           V +YL+PVLKESKF+E G +TPEEFVAAGD L +  P W W  GD SKA+ YLP +KQ+L
Sbjct: 31  VRDYLSPVLKESKFKEHGRITPEEFVAAGDFLTYKFPVWTWEKGDASKARDYLPADKQYL 90

Query: 328 ITKNVPCPRRCKQIDYC---EEKQKIIE------NEQDEEGWVDTHHYDETTGKDIAIED 378
           +T+ VPC RR   + Y    E+ ++++        E DE  WV+TH    + G    I+D
Sbjct: 91  VTRGVPCLRRATSLAYTDADEDAERLLNIGDGPAVEGDE--WVETHTGRISEGNPSQIDD 148



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 46/137 (33%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVL--- 65
           ++R+PLT  Q+++DVS ++A KTVT+E  PH      AS+HPC+HA VMKK+IE +    
Sbjct: 257 ENRSPLTPPQIFQDVSAEHAFKTVTIEPFPHSASLQAASVHPCKHANVMKKVIERMNNSV 316

Query: 66  ----------------------------------------EGGGE---LGVHMYLIIFLK 82
                                                   EGG E   + V  YL++FLK
Sbjct: 317 IASQLAQQTGTSSSSKSINAGKEKRKWFGRRTSGGQGEKDEGGEEVEGMRVDFYLVVFLK 376

Query: 83  FVQSVIPTIEYDFTQNF 99
           F+ S++PTIE D T  F
Sbjct: 377 FIASIVPTIEVDSTTAF 393



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 28/31 (90%)

Query: 206 GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 227 GNLLQVRTYDVMITYDKYYQTPRIWLVGYDE 257



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 68  GGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHP 123
           G  L V  Y  +I + K+ Q+  I  + YD  ++  T  Q+++DVS ++A KTVT+E  P
Sbjct: 227 GNLLQVRTYDVMITYDKYYQTPRIWLVGYDENRSPLTPPQIFQDVSAEHAFKTVTIEPFP 286

Query: 124 HLPGPPMASIHPCR 137
           H      AS+HPC+
Sbjct: 287 HSASLQAASVHPCK 300


>gi|330802823|ref|XP_003289412.1| hypothetical protein DICPUDRAFT_48588 [Dictyostelium purpureum]
 gi|325080495|gb|EGC34048.1| hypothetical protein DICPUDRAFT_48588 [Dictyostelium purpureum]
          Length = 322

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL  ++++ED+S+D+A KTVT++SHPHL G   A IHPCRHA VMKK+I+   E G
Sbjct: 231 ENRKPLKPEEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHASVMKKLIDKQSENG 289

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+  VIPTIEYDFT  F
Sbjct: 290 KEPRVDQYLFLFLKFISVVIPTIEYDFTLEF 320



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 56/89 (62%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           + S+  +V    +   E +TP L  SKF E GV+TPEEFV AGD L   C TW W SGD 
Sbjct: 4   LTSLQQAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDP 63

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQID 342
           S+  SYLP  KQFL+T+NVPC  R K ++
Sbjct: 64  SRNVSYLPKEKQFLLTRNVPCYSRVKTLE 92



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 66/96 (68%), Gaps = 4/96 (4%)

Query: 146 QTQSCNKPNSTEEEDDDDE--EALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQ 203
           QT +  KP  T  +DD+D+  E  DM+DF++   ++E+DP++  +     + ++   +S+
Sbjct: 141 QTTTATKPAVTNNDDDEDDDGEIPDMDDFQDDNIVEEEDPAV--LSKNTTTTTTTNKESK 198

Query: 204 ECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           E  +I+RTRTYD+ ITYDKYYQTPR+WL+GY+E  K
Sbjct: 199 EEDNILRTRTYDISITYDKYYQTPRVWLFGYDENRK 234



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 4/55 (7%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQTQSCNKP 153
           ++++ED+S+D+A KTVT++SHPHL G   A IHPCR    +K     Q+++  +P
Sbjct: 239 EEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHASVMKKLIDKQSENGKEP 292


>gi|388496714|gb|AFK36423.1| unknown [Medicago truncatula]
          Length = 310

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG    SIHPCRH  VMKKII+ ++  G
Sbjct: 214 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HVSIHPCRHGAVMKKIIDVLMSRG 272

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 273 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 303



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 12/139 (8%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EF+ AGD+LV  CPTW W  G+ SK KSYLP  KQF
Sbjct: 13  GTVERITGHRTVSAFKEKGVLSVSEFIIAGDNLVAKCPTWSWEPGEPSKRKSYLPSEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD----------I 374
           LIT+NVPC RR   I  +Y     +++ ++++ +GW+ TH   + T  D          +
Sbjct: 73  LITRNVPCLRRAASIEEEYEAAGGEVLLDDEENDGWLATHGKPKETKSDEEENLPSMESL 132

Query: 375 AIEDKISEISLDASTGWVD 393
            I +KIS     + TG  D
Sbjct: 133 EISEKISAKQTSSHTGGED 151



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 12/96 (12%)

Query: 152 KPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRT 211
           K  S+    +DDE+  DME+F+E   + E DPS   +  E      P  D     +I+RT
Sbjct: 141 KQTSSHTGGEDDEDIPDMEEFKEYDNIIETDPSTYLVAHE------PDDD-----NILRT 189

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           RTYD+ ITYDKYYQTPR+WL GY+E R   +  LVL
Sbjct: 190 RTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVL 225



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 28/34 (82%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A+KTVT+E HPHLPG    SIHPCR
Sbjct: 224 VLEDVSQDHARKTVTIEDHPHLPG-KHVSIHPCR 256


>gi|302679202|ref|XP_003029283.1| hypothetical protein SCHCODRAFT_58636 [Schizophyllum commune H4-8]
 gi|300102973|gb|EFI94380.1| hypothetical protein SCHCODRAFT_58636 [Schizophyllum commune H4-8]
          Length = 352

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 11/108 (10%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            V +YL+PVLKESKF+E G +TPEEFVAAGD L +  P W+W  GD SKA+ YLP +KQ+
Sbjct: 13  AVRDYLSPVLKESKFKEHGRITPEEFVAAGDFLTYKFPVWKWCKGDPSKARDYLPADKQY 72

Query: 327 LITKNVPCPRRCKQIDYC---EEKQKIIE-------NEQDEEGWVDTH 364
           LIT  VPC RR   + Y    E+ ++++         ++D+E WV+TH
Sbjct: 73  LITHGVPCLRRATSLAYTDADEDAERLLNFSEASGAGDKDDE-WVETH 119



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 37/128 (28%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE----TV 64
           ++R PLT  Q+++DVS D+A KTVT+E+ PH      AS+HPC+HA VMKK+IE    +V
Sbjct: 225 ENRNPLTPSQIFQDVSADHAFKTVTIEAFPHSSSLQAASVHPCKHASVMKKVIERMNNSV 284

Query: 65  LE--------------------GGGE-------------LGVHMYLIIFLKFVQSVIPTI 91
           +E                    G G              + V  YL++FLKF+ S++PTI
Sbjct: 285 VEEQLAQKKTSSKDKKRWFGRKGSGTKDAPAEEDEEVTGMRVDFYLVVFLKFIASIVPTI 344

Query: 92  EYDFTQNF 99
           E D T  F
Sbjct: 345 EVDSTTAF 352



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 28/31 (90%)

Query: 206 GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 195 GNLLQVRTYDVMITYDKYYQTPRIWLLGYDE 225



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 67  GGGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESH 122
           GG  L V  Y  +I + K+ Q+  I  + YD  +N  T  Q+++DVS D+A KTVT+E+ 
Sbjct: 194 GGNLLQVRTYDVMITYDKYYQTPRIWLLGYDENRNPLTPSQIFQDVSADHAFKTVTIEAF 253

Query: 123 PHLPGPPMASIHPCR 137
           PH      AS+HPC+
Sbjct: 254 PHSSSLQAASVHPCK 268


>gi|397511447|ref|XP_003826084.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-like-conjugating enzyme
           ATG3-like [Pan paniscus]
          Length = 434

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 75/126 (59%), Gaps = 6/126 (4%)

Query: 265 ALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNK 324
           AL V EYLT     ++F+ET V+TP+EF+AAGDHL  HCPT QWA+G E K ++ LP  K
Sbjct: 143 ALEVTEYLT-XFSRNQFKETAVITPKEFMAAGDHLAVHCPTQQWATGKELKREAXLPTGK 201

Query: 325 QFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEIS 384
            FL+ KNV C  + KQ+ Y  E + I E++     WVDTHH     G    I   + EI 
Sbjct: 202 XFLVAKNVACYIQSKQMAYSGELEAITEDDGG-RAWVDTHHSTGIAG----INKXVEEII 256

Query: 385 LDASTG 390
           L +  G
Sbjct: 257 LTSKNG 262



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 10/89 (11%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMES-HPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
            T +  Y+D+ QD+ KKTVT E+   +LP PP          E+M+KII+T+ E  GE G
Sbjct: 355 FTAEYRYKDIIQDHVKKTVTTENPSTNLPPPP---------XEIMEKIIKTIAEKRGEFG 405

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH+YL+IFLK+V +VIPTI YD  ++FT+
Sbjct: 406 VHVYLLIFLKYVHTVIPTIAYDHKRHFTM 434



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%)

Query: 139 IKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSI--ANIPPEKQSPS 196
           + SK   + Q+C+     EE+D+   ++  ME +EESG L+    ++    I    ++ S
Sbjct: 257 LTSKNGIKLQNCSALXEEEEKDEG--KSTFMEXYEESGLLEADKATLDXRKIVEACKAXS 314

Query: 197 SPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
              G+      +++T+T DL+ITY KYYQ  +LW  GY+E
Sbjct: 315 DVGGEDA----LLQTKTCDLYITYGKYYQMAQLWFLGYDE 350


>gi|268638091|ref|XP_642708.2| autophagy protein 3 [Dictyostelium discoideum AX4]
 gi|284018168|sp|Q550A8.3|ATG3_DICDI RecName: Full=Autophagy-related protein 3
 gi|256013003|gb|EAL68846.2| autophagy protein 3 [Dictyostelium discoideum AX4]
          Length = 338

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL  ++++ED+S+D+A KTVT++SHPHL G   A IHPCRHA VMKK+++   E G
Sbjct: 247 ENRKPLKPEEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHAAVMKKLVDRQSENG 305

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+  VIPTIEYDFT  F
Sbjct: 306 KEPRVDQYLFLFLKFISVVIPTIEYDFTLEF 336



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 65/111 (58%), Gaps = 3/111 (2%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           + S   +V    +   E +TP L  SKF E GV+TPEEFV AGD L   C TW W SGD 
Sbjct: 2   LTSFQQAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDP 61

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI--IENEQD-EEGWV 361
           S+  SYLP  KQFL+T+NVPC  R + ++   +  K   I+ E D E+ WV
Sbjct: 62  SRNVSYLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWV 112



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 8/79 (10%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPA--------GDSQECGDIVRTRTYDLHITY 220
           ++DF++   ++E+DP++ +   +  + ++             ++  +I+RTRTYD+ ITY
Sbjct: 172 LDDFQDDNIIEEEDPAVLSKNNKTTTTTTANNNNNNNSENKVEDNDNILRTRTYDISITY 231

Query: 221 DKYYQTPRLWLYGYNERFK 239
           DKYYQTPR+WL+GY+E  K
Sbjct: 232 DKYYQTPRVWLFGYDENRK 250



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 4/55 (7%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQTQSCNKP 153
           ++++ED+S+D+A KTVT++SHPHL G   A IHPCR    +K     Q+++  +P
Sbjct: 255 EEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHAAVMKKLVDRQSENGKEP 308


>gi|392594099|gb|EIW83424.1| hypothetical protein CONPUDRAFT_164376 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 390

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 75/117 (64%), Gaps = 10/117 (8%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +++++     V +YL+PVL+ESKF+E G +TPEEFVAAGD L +  P W W  GD SKA+
Sbjct: 1   MHAIQQQFFAVRDYLSPVLRESKFKEHGRITPEEFVAAGDFLTYKFPVWTWEKGDTSKAR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIENEQDEEG-------WVDTH 364
            +LP +KQ+L+T+ VPC RR + + Y    E+ ++++   +   G       WV+TH
Sbjct: 61  DFLPTDKQYLMTRGVPCLRRAQSLAYTDADEDAERLLSFGESGAGAGGTGDEWVETH 117



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 51/139 (36%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG---- 67
           APLT  ++++DVS ++A KTVT+E  PH      AS+HPC+HA VMKK+IE +  G    
Sbjct: 252 APLTPSKIFQDVSAEHALKTVTIEPFPHSNTLQAASVHPCKHASVMKKVIERMNAGVVEE 311

Query: 68  -------GGE----------------------------------------LGVHMYLIIF 80
                  GG                                         + V  YL++F
Sbjct: 312 QLAARKSGGRDTGASAAGTAGGKKKWGFGRKSAGKDDKGAVAGEEEEIEGMRVDFYLVVF 371

Query: 81  LKFVQSVIPTIEYDFTQNF 99
           LKF+ S++PTIE D T  F
Sbjct: 372 LKFIASIVPTIEVDSTTAF 390



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/31 (67%), Positives = 28/31 (90%)

Query: 206 GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           G++++ RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 219 GNLLQVRTYDVMITYDKYYQTPRIWLIGYDE 249



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 68  GGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHP 123
           G  L V  Y  +I + K+ Q+  I  I YD      T  ++++DVS ++A KTVT+E  P
Sbjct: 219 GNLLQVRTYDVMITYDKYYQTPRIWLIGYDENGAPLTPSKIFQDVSAEHALKTVTIEPFP 278

Query: 124 HLPGPPMASIHPCR 137
           H      AS+HPC+
Sbjct: 279 HSNTLQAASVHPCK 292


>gi|356529877|ref|XP_003533513.1| PREDICTED: autophagy-related protein 3-like [Glycine max]
          Length = 272

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A KTVT+E HPHLPG   ASIHPCRH  VMKKII+ ++  G
Sbjct: 176 ESRMLLQPELVLEDVSQDHAHKTVTIEDHPHLPGK-HASIHPCRHGAVMKKIIDVLMSHG 234

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 235 VEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 265



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 2/109 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F+E GV++  EFV AGD+LV  CPTW W SGD  K K YLPP KQF
Sbjct: 13  GTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWSWESGDPGKRKPYLPPEKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTGKD 373
           LIT+NVPC RR   +  +Y     +++ +++D +GW+ TH   + T  D
Sbjct: 73  LITRNVPCLRRAASVEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKSD 121



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 1/41 (2%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           +I+RTRTYD+ ITYDKYYQTPR+WL GY+E R   +  LVL
Sbjct: 147 NILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVL 187



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 28/34 (82%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           + EDVSQD+A KTVT+E HPHLPG   ASIHPCR
Sbjct: 186 VLEDVSQDHAHKTVTIEDHPHLPG-KHASIHPCR 218


>gi|328869936|gb|EGG18311.1| autophagy protein 3 [Dictyostelium fasciculatum]
          Length = 335

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL  ++++ED+S+D+A KTVT++SHPHL G   A IHPCRHA VMKK+I    E G
Sbjct: 244 ENRRPLKPEEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHASVMKKLITKQCENG 302

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+  VIPTIEYDFT  F
Sbjct: 303 KEPRVDQYLFLFLKFISVVIPTIEYDFTLEF 333



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 5/112 (4%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           + S+  +V    +   E ++P L+ SKF + GV+TPEEFV AGD L H CPTW W SGD 
Sbjct: 4   LTSLQQAVHKAYVKTVEKVSPTLQTSKFLDEGVLTPEEFVQAGDLLTHKCPTWTWESGDP 63

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI----IENEQDEEGWV 361
           S+  +YLP  KQFL+T+NVPC  R K ++   +  K     IE E +EE WV
Sbjct: 64  SRNVTYLPKEKQFLLTRNVPCYSRVKSLENETKHAKYDILNIEGEDNEE-WV 114



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 12/83 (14%)

Query: 165 EALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGD-----------SQECGDIVRTRT 213
           E  D+EDF++   + E DPS  + P   +S ++               + +  +I+RTRT
Sbjct: 163 EIPDLEDFQDDNLV-EDDPSTLSKPTVNKSNNTTTTTTSTTSNNTSTAAADDDNILRTRT 221

Query: 214 YDLHITYDKYYQTPRLWLYGYNE 236
           YD+ ITYDKYYQTPR+WL+GY+E
Sbjct: 222 YDISITYDKYYQTPRVWLFGYDE 244



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIKSKASNQTQSC 150
           ++++ED+S+D+A KTVT++SHPHL G   A IHPCR         T+ C
Sbjct: 252 EEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHASVMKKLITKQC 299


>gi|331220343|ref|XP_003322847.1| hypothetical protein PGTG_04384 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309301837|gb|EFP78428.1| hypothetical protein PGTG_04384 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 405

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 15/152 (9%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQS     +     V +YL PVL+ESKF+E G +TPEEFVAAGD L +  PTW W +GD 
Sbjct: 1   MQSFQQFTQTHFWAVRDYLAPVLRESKFKEHGRITPEEFVAAGDFLCYKFPTWSWEAGDG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIENE------QDEEGWVDTH 364
           +K + +LP NKQ+LI++NV C RR  Q+ Y    E+ + ++          D+E W  TH
Sbjct: 61  TKRRDFLPENKQYLISRNVACLRRASQMVYTDKDEDAETMMSFAAEGAVGADDEEWAVTH 120

Query: 365 --HYDETTGKDIA----IEDKISEISLDASTG 390
               +++   DI     ++  ++ +SL A  G
Sbjct: 121 TTRPNQSAAHDIGDIPDLDQNVNSLSLSADNG 152



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 41/54 (75%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV 64
           + PLT  Q + D+S DYA+KTVT+E  PHL G  +AS+HPC+H+ VMKK+IE +
Sbjct: 245 KRPLTPSQTFADISSDYAQKTVTIEPFPHLNGLNLASVHPCKHSSVMKKMIERM 298



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           ++V  RTYD  ITYDKYYQTPR+WL GY+E
Sbjct: 214 NLVSVRTYDCLITYDKYYQTPRMWLMGYDE 243



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 77  LIIFLKFVQS-VIPTIEYD-FTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIH 134
           LI + K+ Q+  +  + YD   +  T  Q + D+S DYA+KTVT+E  PHL G  +AS+H
Sbjct: 224 LITYDKYYQTPRMWLMGYDEHKRPLTPSQTFADISSDYAQKTVTIEPFPHLNGLNLASVH 283

Query: 135 PCR 137
           PC+
Sbjct: 284 PCK 286


>gi|307105862|gb|EFN54110.1| hypothetical protein CHLNCDRAFT_36301 [Chlorella variabilis]
          Length = 330

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/88 (53%), Positives = 60/88 (68%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M  + + +  T    AE + P   +S F+E GV+TPEEFVAAGD+LVH CPTW W +GD 
Sbjct: 1   MSGLRSFLHSTYKSAAEAVLPARSQSAFKEKGVLTPEEFVAAGDYLVHTCPTWSWEAGDA 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQI 341
            KA+ +LPP KQFLIT+NVPC RR   +
Sbjct: 61  KKARPFLPPTKQFLITRNVPCLRRAAAV 88



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 3/89 (3%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPH---LPGPPMASIHPCRHAEVMKKIIETVLEG 67
           R PLT  Q+ EDVS+++A+KTVTME HPH     G   ASIHPC+HA VM K+ E V   
Sbjct: 235 RQPLTPGQVLEDVSEEHARKTVTMEPHPHGGVTGGVQAASIHPCQHANVMHKLAERVAGE 294

Query: 68  GGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
            GE     YL++FLKF+ SV+PTIEYD+T
Sbjct: 295 EGEFSAERYLVLFLKFIASVVPTIEYDYT 323



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 29/42 (69%)

Query: 195 PSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P+  AG       IVRTRTYDL ITYDKYYQ PR WL GY+E
Sbjct: 192 PAPTAGGGGGEEHIVRTRTYDLLITYDKYYQVPRFWLIGYDE 233



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 9/68 (13%)

Query: 77  LIIFLKFVQSVIP---TIEYDF-TQNFTVDQMYEDVSQDYAKKTVTMESHPH---LPGPP 129
           LI + K+ Q  +P    I YD   Q  T  Q+ EDVS+++A+KTVTME HPH     G  
Sbjct: 214 LITYDKYYQ--VPRFWLIGYDEDRQPLTPGQVLEDVSEEHARKTVTMEPHPHGGVTGGVQ 271

Query: 130 MASIHPCR 137
            ASIHPC+
Sbjct: 272 AASIHPCQ 279


>gi|390481106|ref|XP_003736074.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like, partial
          [Callithrix jacchus]
          Length = 88

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/64 (76%), Positives = 57/64 (89%)

Query: 13 PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
          PLTV+ MYED+SQ+Y K+TVT+E+HPHLP  PM S+HPC+HAEVMKKIIETV EG GELG
Sbjct: 4  PLTVEHMYEDISQEYVKRTVTIENHPHLPPHPMCSVHPCQHAEVMKKIIETVAEGEGELG 63

Query: 73 VHMY 76
          VHMY
Sbjct: 64 VHMY 67



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/41 (63%), Positives = 34/41 (82%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+ MYED+SQ+Y K+TVT+E+HPHLP  PM S+HPC+
Sbjct: 3   QPLTVEHMYEDISQEYVKRTVTIENHPHLPPHPMCSVHPCQ 43


>gi|299752320|ref|XP_001830847.2| autophagocytosis associated domain-containing protein [Coprinopsis
           cinerea okayama7#130]
 gi|298409780|gb|EAU90911.2| autophagocytosis associated domain-containing protein [Coprinopsis
           cinerea okayama7#130]
          Length = 423

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 3/103 (2%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           + +++     V EYL+PVLKESKF+E G +TPEEFVA+GD LV+  P W W  GD SK +
Sbjct: 1   MQALQSHLFAVREYLSPVLKESKFKEHGRITPEEFVASGDFLVYKFPVWSWEKGDPSKTR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIENEQDE 357
            +LP +KQ+L+T+ VPC RR + + Y    E+ ++++    DE
Sbjct: 61  DFLPADKQYLVTRGVPCLRRAQSLAYTDADEDAERLVNFSGDE 103



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 39/53 (73%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE 62
           +R PLT  Q+++D+S D+A+KTVT+E   H      AS+HPC+H+ VMKKIIE
Sbjct: 271 NRTPLTPQQIFQDISADHAQKTVTIEQFIHSTSLQAASVHPCKHSSVMKKIIE 323



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 27/30 (90%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           ++++ RTYD+ ITYDKYYQTPRLWL GY+E
Sbjct: 241 NLLQVRTYDVMITYDKYYQTPRLWLIGYDE 270



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 71  LGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLP 126
           L V  Y  +I + K+ Q+  +  I YD  +   T  Q+++D+S D+A+KTVT+E   H  
Sbjct: 243 LQVRTYDVMITYDKYYQTPRLWLIGYDENRTPLTPQQIFQDISADHAQKTVTIEQFIHST 302

Query: 127 GPPMASIHPCR 137
               AS+HPC+
Sbjct: 303 SLQAASVHPCK 313



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           + V  YL++FLKF+ S++PTIE D T +F
Sbjct: 395 MRVDFYLVVFLKFIASIVPTIEVDSTTSF 423


>gi|281209052|gb|EFA83227.1| autophagy protein 3 [Polysphondylium pallidum PN500]
          Length = 352

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL  ++++ED+S+D+A KTVT++SHPHL G   A IHPCRHA VMKK+I    E G
Sbjct: 261 ENRKPLKPEEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHASVMKKLITKQSENG 319

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  YL +FLKF+  VIPTIEYDFT  F
Sbjct: 320 KEPRVDQYLFLFLKFISVVIPTIEYDFTLEF 350



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 7/111 (6%)

Query: 256 SVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESK 315
           S+  S+    +   E +TP L  SKF + GV+TPEEFV AGD L H CPTW W SGD S+
Sbjct: 6   SIQQSIHKAYVKTVEKVTPTLSTSKFLDEGVLTPEEFVQAGDLLTHMCPTWTWESGDPSR 65

Query: 316 AKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI-----IENEQDEEGWV 361
             ++LP  KQFL+T+NVPC  R K ++  E +  I     +E E DEE WV
Sbjct: 66  NVNFLPKEKQFLLTRNVPCYSRVKSLE-NESRASISDILQLEGEDDEE-WV 114



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 20/107 (18%)

Query: 152 KPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEK----------------QSP 195
           KP S ++++D+D +  DMEDF++   + E DPS      +                 +S 
Sbjct: 159 KPTSDDDDEDEDGDIPDMEDFQDDNLV-EDDPSTLKSNQQTNNNNNNNNNSNNNVSLESS 217

Query: 196 SSPAGDSQECGD---IVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           +  A  +   GD   I+RTRTYD+ ITYDKYYQTPR+WL+GY+E  K
Sbjct: 218 TGNANSNSSVGDDDNILRTRTYDISITYDKYYQTPRVWLFGYDENRK 264



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 39/55 (70%), Gaps = 4/55 (7%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQTQSCNKP 153
           ++++ED+S+D+A KTVT++SHPHL G   A IHPCR    +K   + Q+++  +P
Sbjct: 269 EEIFEDISEDHAHKTVTIDSHPHL-GISFAYIHPCRHASVMKKLITKQSENGKEP 322


>gi|328859480|gb|EGG08589.1| hypothetical protein MELLADRAFT_116020 [Melampsora larici-populina
           98AG31]
          Length = 393

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 10/121 (8%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           MQS+    +     V +YL PVL+ESKF+E G +TPEEFVAAGD L +  PTW W SGD 
Sbjct: 1   MQSLQQFTQTHFWAVRDYLAPVLRESKFKEHGRITPEEFVAAGDFLCYKFPTWSWESGDP 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIE-------NEQDEEGWVDT 363
           SK + +LP NKQ+LI++NV C RR  Q+ Y    E+ + ++           D+E W  T
Sbjct: 61  SKRRDFLPENKQYLISRNVACLRRASQMVYTDADEDAETMMSFAAEGAVKTGDDEDWAVT 120

Query: 364 H 364
           H
Sbjct: 121 H 121



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 40/52 (76%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE 62
           + PLT  Q + D+S DYA+KTVT+E  PHL G  +AS+HPC+HA VMKK+IE
Sbjct: 245 KNPLTPTQTFSDISSDYAQKTVTIEPFPHLNGLNLASVHPCKHASVMKKVIE 296



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           ++V  RTYD  ITYDKYYQTPR+WL GY+E
Sbjct: 214 NLVIVRTYDCLITYDKYYQTPRMWLMGYDE 243



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)

Query: 77  LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIH 134
           LI + K+ Q+  +  + YD  +N  T  Q + D+S DYA+KTVT+E  PHL G  +AS+H
Sbjct: 224 LITYDKYYQTPRMWLMGYDEHKNPLTPTQTFSDISSDYAQKTVTIEPFPHLNGLNLASVH 283

Query: 135 PCR 137
           PC+
Sbjct: 284 PCK 286



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 3/35 (8%)

Query: 62  ETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
           ET +EG   L V  YL++FLKF+ SV+PTIE D T
Sbjct: 359 ETEVEG---LRVDQYLLVFLKFISSVVPTIEIDST 390


>gi|409075546|gb|EKM75925.1| hypothetical protein AGABI1DRAFT_116121 [Agaricus bisporus var.
           burnettii JB137-S8]
 gi|426194249|gb|EKV44181.1| hypothetical protein AGABI2DRAFT_194979 [Agaricus bisporus var.
           bisporus H97]
          Length = 390

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 12/125 (9%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           + +++     V E L+PVLKESKF+E G +TPEEFV AGD LV+  P W W SGD+SK +
Sbjct: 1   MQALQSHLFAVREILSPVLKESKFKEHGRITPEEFVGAGDFLVYKFPVWSWESGDKSKTR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIEN---------EQDEEGWVDTHH 365
            +LP +KQ+L+T+ VPC RR   + Y    E+ ++++           + D + WV+TH 
Sbjct: 61  DFLPADKQYLVTRGVPCLRRATSLAYTDADEDAERLLSFADGAPGSGPDLDGDEWVETHA 120

Query: 366 YDETT 370
             ++T
Sbjct: 121 GRKST 125



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 53/144 (36%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE------ 62
           ++R PLT   +++D+S D+A KTVT+E   H      AS+HPC+HA VMKK+IE      
Sbjct: 247 ENRNPLTPQHIFQDISADHANKTVTIEPFIHSASLQAASVHPCKHASVMKKVIERMNSSV 306

Query: 63  ------------------------TVLEGGGE-----------------------LGVHM 75
                                   +V   GG+                       + V  
Sbjct: 307 VAEQLAHQQQQGLAATTKEGKKKWSVFGSGGKSSAQKKDKAAAASGADGDEQVEGMRVDF 366

Query: 76  YLIIFLKFVQSVIPTIEYDFTQNF 99
           YL++FLKF+ S++PTIE D T +F
Sbjct: 367 YLVVFLKFIASIVPTIEVDSTTSF 390



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 26/30 (86%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           +++  RTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 218 NLLSVRTYDVMITYDKYYQTPRVWLIGYDE 247



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)

Query: 71  LGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLP 126
           L V  Y  +I + K+ Q+  +  I YD  +N  T   +++D+S D+A KTVT+E   H  
Sbjct: 220 LSVRTYDVMITYDKYYQTPRVWLIGYDENRNPLTPQHIFQDISADHANKTVTIEPFIHSA 279

Query: 127 GPPMASIHPCR 137
               AS+HPC+
Sbjct: 280 SLQAASVHPCK 290


>gi|58618125|gb|AAW80629.1| autophagy protein ATG3 [Nicotiana benthamiana]
          Length = 160

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR  L  + + EDVSQD+A+KTVT+E HPHLPG   AS+HPCRH  VMKKII+ ++  G
Sbjct: 68  ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGK-HASVHPCRHGAVMKKIIDVLMLRG 126

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
            E  V  Y  +FLKF+ SVIPTIEYD+T +F
Sbjct: 127 VEPEVDKYFFLFLKFMASVIPTIEYDYTMDF 157



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 8/86 (9%)

Query: 162 DDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYD 221
           ++E+  DM ++EE+  L E DP  A +         P  D+     I+RTRTYD+ ITYD
Sbjct: 1   EEEDIPDMGEYEETDNLIETDP--ATLQTTYLVAHEPDDDN-----ILRTRTYDISITYD 53

Query: 222 KYYQTPRLWLYGYNE-RFKGKENLVL 246
           KYYQTPR+WL GY+E R   +  LVL
Sbjct: 54  KYYQTPRVWLTGYDESRMLLQPELVL 79



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 28/32 (87%), Gaps = 1/32 (3%)

Query: 106 EDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           EDVSQD+A+KTVT+E HPHLPG   AS+HPCR
Sbjct: 80  EDVSQDHARKTVTIEDHPHLPG-KHASVHPCR 110


>gi|298707009|emb|CBJ29817.1| Autophagy-related protein3 [Ectocarpus siliculosus]
          Length = 437

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 67/90 (74%), Gaps = 1/90 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +S  PL  ++++EDV QDYA++TVTME HPHL     AS+HPC+HA  MK ++E + +GG
Sbjct: 321 ESGQPLPAEEVFEDVMQDYARQTVTMEPHPHLSSH-HASVHPCKHASTMKIMLENLTKGG 379

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            E  V  YL IFLKF+QSV+PTI+YD+T +
Sbjct: 380 KEARVDQYLFIFLKFIQSVVPTIDYDYTMS 409



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 1/76 (1%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLP-PNKQF 326
           + E +TP  K S F   GV+TPEEF+ AG+ LV  CPTW W +GD SKAK  LP  ++QF
Sbjct: 8   IRETVTPARKTSAFLSQGVLTPEEFIEAGEQLVFKCPTWTWEAGDPSKAKDCLPDKSRQF 67

Query: 327 LITKNVPCPRRCKQID 342
           L+T+NVPC RR K ++
Sbjct: 68  LVTRNVPCHRRAKDLE 83



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 27/29 (93%)

Query: 208 IVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           I+ TR+YDL ITYDK++QTPR++L+GY+E
Sbjct: 293 ILPTRSYDLSITYDKHHQTPRMFLFGYDE 321



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q    ++++EDV QDYA++TVTME HPHL     AS+HPC+
Sbjct: 324 QPLPAEEVFEDVMQDYARQTVTMEPHPHL-SSHHASVHPCK 363


>gi|387219981|gb|AFJ69699.1| hypothetical protein NGATSA_3043200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 93

 Score =  105 bits (261), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/73 (61%), Positives = 54/73 (73%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           GV EY  PVL +S F E GV+TP+EFV AGD LV+ CPTW W  GD +K K YLP +KQ+
Sbjct: 11  GVREYAYPVLDKSAFMERGVLTPQEFVLAGDQLVYRCPTWSWEGGDPTKRKPYLPVDKQY 70

Query: 327 LITKNVPCPRRCK 339
           L+T+NVPC RR K
Sbjct: 71  LVTRNVPCARRAK 83


>gi|290983349|ref|XP_002674391.1| predicted protein [Naegleria gruberi]
 gi|284087981|gb|EFC41647.1| predicted protein [Naegleria gruberi]
          Length = 303

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/102 (51%), Positives = 64/102 (62%), Gaps = 14/102 (13%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
            AEY   V KES F E GV+TPEEF  AGD LV  CPTW W++G+ SK K YLP +KQFL
Sbjct: 23  FAEYFIDVPKESHFYERGVLTPEEFEKAGDLLVSKCPTWSWSAGEPSKRKDYLPADKQFL 82

Query: 328 ITKNVPCPRRCKQIDYCEEKQKIIENEQDEE-----GWVDTH 364
           IT+NVPC +RC +         +IE  +DEE      W+ TH
Sbjct: 83  ITRNVPCLKRCSE---------LIEMAKDEEPVEDGEWIATH 115



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/100 (53%), Positives = 69/100 (69%), Gaps = 9/100 (9%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G + +G K    L  +++ ED+  DY  KTVT+E HPHL     ASIHPCRHAEVMKK+
Sbjct: 205 FGYDERGAK----LESEKILEDIHADYGNKTVTIEQHPHL-NTQWASIHPCRHAEVMKKM 259

Query: 61  IETVLEGG-GE---LGVHMYLIIFLKFVQSVIPTIEYDFT 96
           ++ ++ GG GE   + V +YL +FLKF+ SVIPTIEYDFT
Sbjct: 260 VDRLVGGGSGEKQFVRVDLYLFLFLKFISSVIPTIEYDFT 299



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 5/56 (8%)

Query: 182 DPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNER 237
           D  + +   +K +  +  GDS     I++TRTYD  ITYDKYYQTPR+WL+GY+ER
Sbjct: 160 DSELEDTIKDKGALEANNGDS-----ILQTRTYDFSITYDKYYQTPRVWLFGYDER 210



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           +++ ED+  DY  KTVT+E HPHL     ASIHPCR
Sbjct: 217 EKILEDIHADYGNKTVTIEQHPHL-NTQWASIHPCR 251


>gi|428182532|gb|EKX51392.1| hypothetical protein GUITHDRAFT_161501 [Guillardia theta CCMP2712]
          Length = 319

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 67/89 (75%), Gaps = 2/89 (2%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG--GGE 70
           PLT  Q++ED+SQD+AK+TVT++ HPH+PG   AS+HPC+HA  +K+II+ +  G  G +
Sbjct: 229 PLTHAQVFEDMSQDHAKRTVTIDPHPHVPGVSHASVHPCKHAPTLKRIIDQIESGDSGRQ 288

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           +     L +FLKF+ S+IPTIEYDFT +F
Sbjct: 289 MRPDQSLFLFLKFISSIIPTIEYDFTMDF 317



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 6/102 (5%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLIT 329
           E +T V   S+FRE GV+TPEEFVAAGD LV+ CP+W W +GD SKAK YLP NKQ+LIT
Sbjct: 20  ESVTSVSHVSQFREKGVLTPEEFVAAGDMLVYKCPSWSWEAGDPSKAKDYLPKNKQYLIT 79

Query: 330 KNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTG 371
           +NVPC +R   +   E  ++I   + ++E W     Y +T G
Sbjct: 80  RNVPCHQRVAALG--ESVREIAMEDAEDEEWT----YTQTLG 115



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 31/35 (88%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q++ED+SQD+AK+TVT++ HPH+PG   AS+HPC+
Sbjct: 234 QVFEDMSQDHAKRTVTIDPHPHVPGVSHASVHPCK 268



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 25/29 (86%)

Query: 208 IVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
            V+TR+Y++ ITYDKYY  PR+WL+GY+E
Sbjct: 197 FVKTRSYNISITYDKYYMVPRMWLFGYDE 225


>gi|219109812|ref|XP_002176659.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411194|gb|EEC51122.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 302

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 9/104 (8%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           MG + +G     PL+  +M EDV  DYA KTVT+E+HPH+ GP  ASIHPC+H +VMK I
Sbjct: 199 MGMSAEG----QPLSGQEMMEDVISDYANKTVTIEAHPHVSGP-HASIHPCQHGKVMKTI 253

Query: 61  IETVLEGG--GELG--VHMYLIIFLKFVQSVIPTIEYDFTQNFT 100
           +  +++    G+ G  V MY+ IFLKFV S+IPTI YDFT + T
Sbjct: 254 VRNLMQSSTDGDEGPSVEMYIFIFLKFVSSIIPTINYDFTMDVT 297



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 9/107 (8%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-----ASGDESK 315
           + G      EYLTP LK S F E GV+TP+EFV AGD LV  CPTW W      SG ++ 
Sbjct: 1   MMGHFWAAREYLTPTLKTSAFLEKGVLTPDEFVRAGDELVFRCPTWSWQGNSRGSGSQAS 60

Query: 316 A-KSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
           A K+YLP  KQ+L+T+NVPC  R   ++   + Q+    E DE  W+
Sbjct: 61  ATKTYLPAGKQYLVTRNVPCQARVASMETAMDLQR---GEDDEGDWL 104



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 18/107 (16%)

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTY 214
           +T EE D ++E  DM DFE+   + +   +   +  +               ++++TRTY
Sbjct: 136 ATLEESDGNDEYADMADFEDDNVIRDDVATAVVVDRDD--------------NLIKTRTY 181

Query: 215 DLHITYDKYYQTPRLWLYGYN---ERFKGKENLV-LISKWCNRMQSV 257
           DL ITYDKYYQTPR+W+ G +   +   G+E +  +IS + N+  ++
Sbjct: 182 DLSITYDKYYQTPRVWMMGMSAEGQPLSGQEMMEDVISDYANKTVTI 228



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 12/92 (13%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPC---RAIKSKASNQTQSCNKP 153
           Q  +  +M EDV  DYA KTVT+E+HPH+ G P ASIHPC   + +K+   N  QS    
Sbjct: 206 QPLSGQEMMEDVISDYANKTVTIEAHPHVSG-PHASIHPCQHGKVMKTIVRNLMQSST-- 262

Query: 154 NSTEEEDDDDEEALDMEDFEESGFLDEQDPSI 185
                 D D+  +++M  F    F+    P+I
Sbjct: 263 ------DGDEGPSVEMYIFIFLKFVSSIIPTI 288


>gi|443690709|gb|ELT92769.1| hypothetical protein CAPTEDRAFT_214370 [Capitella teleta]
          Length = 131

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 58/68 (85%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PLTV+QMYED SQD+  KTVT+E+HP+  GPP+AS+HPCRHA+VMK+IIE V  GG
Sbjct: 63  ENRKPLTVEQMYEDTSQDHVHKTVTIEAHPYTSGPPVASVHPCRHADVMKRIIENVAGGG 122

Query: 69  GELGVHMY 76
            ELGVH++
Sbjct: 123 KELGVHLH 130



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 3/48 (6%)

Query: 93  YDFTQN---FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Y + +N    TV+QMYED SQD+  KTVT+E+HP+  GPP+AS+HPCR
Sbjct: 59  YGYDENRKPLTVEQMYEDTSQDHVHKTVTIEAHPYTSGPPVASVHPCR 106



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 35/45 (77%)

Query: 195 PSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           PS+    + E   I++TRTYDL++TY+KYYQTPRLWLYGY+E  K
Sbjct: 22  PSTAVAAATEDDSILQTRTYDLNVTYEKYYQTPRLWLYGYDENRK 66


>gi|397614177|gb|EJK62643.1| hypothetical protein THAOC_16735, partial [Thalassiosira oceanica]
          Length = 1163

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 56/78 (71%)

Query: 265 ALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNK 324
           A  V EYLTP LK S F   GV+TPEEFV AGD LV+ CPTW W +GD +K K +LPP+K
Sbjct: 836 AQSVREYLTPTLKSSAFLSRGVLTPEEFVKAGDELVYKCPTWTWEAGDPNKRKGHLPPDK 895

Query: 325 QFLITKNVPCPRRCKQID 342
           Q+L+T++VPC  R   ++
Sbjct: 896 QYLVTRSVPCTARVSSLE 913



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 5/93 (5%)

Query: 10   SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVL---E 66
            S  PLT  +M +DV  DYA +TVT+E+HPH+ G P ASIHPC+H  VMK I++ +    E
Sbjct: 1068 SSRPLTGQEMMQDVISDYANRTVTVENHPHVSG-PHASIHPCQHGAVMKTIVKNLTKEGE 1126

Query: 67   GGGEL-GVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            GG  +  V +YL IFLKFV S+IPTI YDFT +
Sbjct: 1127 GGKSVPTVDLYLFIFLKFVSSMIPTINYDFTMD 1159



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 20/136 (14%)

Query: 130  MASIHPCRAIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIP 189
            +AS+    +++S A +  Q     +   ++ D+D+E  DM DFE+   L+++  +  +  
Sbjct: 973  LASLKIGGSVESAAQSDAQG----DEAAQQQDEDDEYADMADFEDDNLLEDEAAAAVS-- 1026

Query: 190  PEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNER-----FKGKENL 244
                +  +  G+S    ++++ RTYDL ITYDKYYQTPR+WL GY+         G+E +
Sbjct: 1027 ----TSDADGGNS----NVLKVRTYDLSITYDKYYQTPRVWLMGYDSEDSSRPLTGQEMM 1078

Query: 245  V-LISKWCNRMQSVIN 259
              +IS + NR  +V N
Sbjct: 1079 QDVISDYANRTVTVEN 1094



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 94   DFTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            D ++  T  +M +DV  DYA +TVT+E+HPH+ G P ASIHPC+
Sbjct: 1067 DSSRPLTGQEMMQDVISDYANRTVTVENHPHVSG-PHASIHPCQ 1109


>gi|145348199|ref|XP_001418543.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578772|gb|ABO96836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 290

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M ++ ++V G      E +TP+   S F   GV+TPEEFVAAGD L   CPTW W +G  
Sbjct: 1   MHALRHAVHGAYKTTMEAVTPIRSSSAFASEGVLTPEEFVAAGDALTRACPTWTWTTGQG 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDT 363
           ++A++YLP  KQ+L T+ VPC RR + ++     ++ +  E  +EGW+ T
Sbjct: 61  ARARTYLPREKQYLTTRRVPCARRARDVEAYAGAEEALTGE--DEGWIAT 108



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 2/89 (2%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R  L   +  ED+S D+A+KTVT++ HPH  G P ASIHPC+HA VMKK++ +     
Sbjct: 202 ENRLVLKPSKTLEDISADHAQKTVTIDPHPHT-GVPSASIHPCKHASVMKKLVNSARAQS 260

Query: 69  GEL-GVHMYLIIFLKFVQSVIPTIEYDFT 96
           GE   V  Y+ +FLKF+ SV+PTIEYD+T
Sbjct: 261 GEAPSVDSYMFVFLKFIASVVPTIEYDYT 289



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 28/30 (93%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           +IV+TRTYD+ ITYDKYYQTPR+WL GY+E
Sbjct: 173 NIVKTRTYDVSITYDKYYQTPRVWLNGYDE 202



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 26/32 (81%), Gaps = 1/32 (3%)

Query: 106 EDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ED+S D+A+KTVT++ HPH  G P ASIHPC+
Sbjct: 214 EDISADHAQKTVTIDPHPHT-GVPSASIHPCK 244


>gi|388852507|emb|CCF53909.1| related to AUT1-essential for autophagocytosis [Ustilago hordei]
          Length = 376

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 12/119 (10%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +N+++     V +YL PVL+ESKF+E G +TP+EFVAAGD L +  PTWQW +G  SKA+
Sbjct: 1   MNTLQTHFWAVRDYLAPVLRESKFKEHGRITPDEFVAAGDFLSYKFPTWQWCAGSTSKAR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYC--------EEKQKIIENEQDEEG----WVDTH 364
            YLP +KQFLI+  VP  RR  QI+          +EK    +    E G    WV TH
Sbjct: 61  DYLPKDKQFLISCGVPSLRRVSQIEKGVGVGVKDDDEKLMSFDESGAEAGEDDQWVATH 119



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 175 SGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
            G  +E DP+ A +P    + S+ A  + + G ++  R YD  ITYDKYYQTPR+WL GY
Sbjct: 201 GGIEEEDDPATAAVPNVSNTASASASGA-DNGKLLSVRKYDCIITYDKYYQTPRMWLVGY 259

Query: 235 NE 236
           +E
Sbjct: 260 DE 261



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 55/127 (43%), Gaps = 35/127 (27%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVM--- 57
           +G +  GV    PL   Q++EDVS DYA+KTVT+E  PH    P +S      A V    
Sbjct: 257 VGYDEHGV----PLKPAQIFEDVSSDYAQKTVTIEPFPHGHAGPDSSATSSASARVTGGS 312

Query: 58  -------------------------KKIIETVLEGGGELGVHMYLIIFLKFVQSVIPTIE 92
                                        E  +EG   L V  Y+IIFLKF+ S++P IE
Sbjct: 313 GAGADGASSAGAGAGAGAGEAAGEAGADGEEEVEG---LRVDQYMIIFLKFMASIVPAIE 369

Query: 93  YDFTQNF 99
            D TQ  
Sbjct: 370 IDATQAL 376


>gi|303285446|ref|XP_003062013.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456424|gb|EEH53725.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 304

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 5/94 (5%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           VAE L P + +S F E GVVTPEEF+ AGD L   CPTW W  GDE  A+S+LP +KQFL
Sbjct: 1   VAEQLMPAMTKSAFAEKGVVTPEEFIVAGDFL---CPTWSWQGGDEKHARSHLPRDKQFL 57

Query: 328 ITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
           +T+NVPC  R   ++  E   K +  + D+EGWV
Sbjct: 58  VTRNVPCAMRAAAME--EYAGKEVHLDGDDEGWV 89



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 2/87 (2%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE-TVLEGGG 69
           R+ L   +  EDVS ++AKKTVT++ HPH  G P ASIHPC+HA VMKK+++ T   GGG
Sbjct: 216 RSVLPPKKTLEDVSAEHAKKTVTIDPHPHT-GAPAASIHPCKHAPVMKKLMDATARAGGG 274

Query: 70  ELGVHMYLIIFLKFVQSVIPTIEYDFT 96
              V  YL++FLKF+ SV+PTIEYD+T
Sbjct: 275 TPKVEHYLLVFLKFIASVVPTIEYDYT 301



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 10/78 (12%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSP----------AGDSQECGDIVRTRTYDLHI 218
           M+DF + G  +E+D + A  P    + S            A       +I++TRTYDL I
Sbjct: 137 MDDFVDLGAEEEEDDASAAAPRRGIADSDAELFSAAGATTAATKNPADNILKTRTYDLSI 196

Query: 219 TYDKYYQTPRLWLYGYNE 236
           TYDKYYQTPR+WL GY+E
Sbjct: 197 TYDKYYQTPRVWLSGYDE 214



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           +  EDVS ++AKKTVT++ HPH  G P ASIHPC+
Sbjct: 223 KTLEDVSAEHAKKTVTIDPHPHT-GAPAASIHPCK 256


>gi|242043550|ref|XP_002459646.1| hypothetical protein SORBIDRAFT_02g007970 [Sorghum bicolor]
 gi|241923023|gb|EER96167.1| hypothetical protein SORBIDRAFT_02g007970 [Sorghum bicolor]
          Length = 315

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 3/111 (2%)

Query: 257 VINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA 316
           V  SV G   G  E +T     S F E GV++  EFV AGD+LV   PTW W +GD SK 
Sbjct: 3   VKQSVFGLYKGTVERVTAPRTASAFLEKGVLSVPEFVLAGDNLVAKFPTWSWCAGDPSKR 62

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           K YLP +KQFL+T+NVPC RR   ++        + ++E++QD EGW+ TH
Sbjct: 63  KPYLPADKQFLVTRNVPCLRRAISVEGQYDAAGAEVVVEDDQDGEGWLATH 113



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 1/88 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  D ++ED+SQD+A+KTVT+E HPHL     AS+HPCRHA VMK ++    E G
Sbjct: 220 ESRMPLKPDLVFEDISQDHARKTVTLEDHPHLLAGKHASVHPCRHAAVMKHMVINENE-G 278

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFT 96
            +  V MYL+IFLKF+ +VIPTIE D T
Sbjct: 279 VQPEVDMYLVIFLKFIATVIPTIECDST 306



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 1/41 (2%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE-RFKGKENLVL 246
           +I+RTRTYD+ ITYDKYYQTPR+WL GY+E R   K +LV 
Sbjct: 191 NILRTRTYDVSITYDKYYQTPRVWLTGYDESRMPLKPDLVF 231



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 29/36 (80%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           D ++ED+SQD+A+KTVT+E HPHL     AS+HPCR
Sbjct: 228 DLVFEDISQDHARKTVTLEDHPHLLAGKHASVHPCR 263


>gi|395752319|ref|XP_003779401.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-like-conjugating enzyme
           ATG3-like [Pongo abelii]
          Length = 386

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 6/138 (4%)

Query: 253 RMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD 312
           R   V+ S +  AL V EYLT     ++F+ET V+TP+EF+AAG+HL  HCPT Q   G+
Sbjct: 83  RFGEVLVSHERKALEVTEYLT-XFSRNQFKETAVITPKEFMAAGNHLAVHCPTQQRVIGE 141

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGK 372
           E K ++ LP +K FL+ KNV C  + KQ+ Y  E + + E++     WVDTHH     G 
Sbjct: 142 ELKREAXLPTSKXFLVAKNVACYIQSKQMAYSGELEAVTEDDGG-RAWVDTHHSTGIAG- 199

Query: 373 DIAIEDKISEISLDASTG 390
              I   + EI L +  G
Sbjct: 200 ---INKXVEEIILTSKNG 214



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 10/89 (11%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMES-HPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
            T + MY+D+ QD+ KKTVT E+   +LP PP          E M+KI +T+ E  GE G
Sbjct: 307 FTDEHMYKDIIQDHVKKTVTTENPSTNLPPPP---------XETMEKITKTIAEKRGEFG 357

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           VH+YL+IFLK+V +VIPTI YD+ ++FT+
Sbjct: 358 VHVYLLIFLKYVHTVIPTIAYDYKRHFTM 386



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 8/100 (8%)

Query: 139 IKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSP 198
           + SK   + Q+C+     EE+D+   ++  ME +EESG L+    ++     E++   + 
Sbjct: 209 LTSKNGIKFQNCSTLXEEEEKDEG--KSTFMEXYEESGLLEADKATL----DERKIVEAC 262

Query: 199 AGDSQECGD--IVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
              S   G+  +++T+T DL+I Y KYYQ  +LW +GY+E
Sbjct: 263 KAXSDVGGEDALLQTKTCDLYIIYGKYYQMAQLWFFGYDE 302


>gi|401410390|ref|XP_003884643.1| putative autophagocytosis associated protein [Neospora caninum
           Liverpool]
 gi|325119061|emb|CBZ54613.1| putative autophagocytosis associated protein [Neospora caninum
           Liverpool]
          Length = 407

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 70/105 (66%), Gaps = 7/105 (6%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G +  GV    PL  ++++ED+  DYA KTVT++ HP   G P ASIHPCRHA VMKK+
Sbjct: 304 FGYSENGV----PLLPEEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCRHASVMKKV 358

Query: 61  IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVDQMY 105
           +++ LE G +    + L++ LKFV SVIPTIEYDFT +  VD  +
Sbjct: 359 VDSWLESGMKPRHDLALLVLLKFVSSVIPTIEYDFTMD--VDMFF 401



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 12/104 (11%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDES--KAKSYLPPNKQFLIT 329
            T    ES F   G +TP+EFV AGD L H  PTWQW+    S  +A ++LP +KQFLIT
Sbjct: 85  FTSAPTESSFLSKGTLTPQEFVDAGDLLTHKFPTWQWSGAGPSGKRASTWLPEDKQFLIT 144

Query: 330 KNVPCPRRCKQIDYCEEKQ----------KIIENEQDEEGWVDT 363
           KNVPC RR + +D     +            + N+++ EG VDT
Sbjct: 145 KNVPCYRRVRDMDDALNSRVGHDAEGGWTLPLLNDEEREGRVDT 188



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 11/99 (11%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           ++ + A  +T + ++  +     DD  + ++  D +  G + E D      P   ++PSS
Sbjct: 221 SVAAHAGQETAAADRERNLR---DDVPDLINFSDID--GLVQEDDD-----PAAAEAPSS 270

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
               S +  +IV  RTYDL ITYDKY+QTPR+WL+GY+E
Sbjct: 271 FVRSSADA-EIVAARTYDLSITYDKYFQTPRIWLFGYSE 308



 Score = 44.7 bits (104), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++++ED+  DYA KTVT++ HP   G P ASIHPCR
Sbjct: 316 EEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCR 350


>gi|164657253|ref|XP_001729753.1| hypothetical protein MGL_3297 [Malassezia globosa CBS 7966]
 gi|159103646|gb|EDP42539.1| hypothetical protein MGL_3297 [Malassezia globosa CBS 7966]
          Length = 435

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 57/84 (67%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +++V+     V +Y  PVL+ESKF+E G++TP+EFV AGD+L    P W W  G+ SK +
Sbjct: 1   MHAVQTRFWAVRDYFAPVLRESKFKECGLITPDEFVVAGDYLTSKFPAWSWCQGEPSKTR 60

Query: 318 SYLPPNKQFLITKNVPCPRRCKQI 341
            YLP NKQFL+ +NVPC RR   +
Sbjct: 61  DYLPKNKQFLMIRNVPCLRRVSAV 84



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 73/166 (43%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPP---------------- 44
           +G +  G+    PL    +YEDV+ D+A KTVT E  PH  G P                
Sbjct: 276 LGYDEHGI----PLRPSDVYEDVASDHAFKTVTTEPFPH--GTPGVGALDTVAMGTASKR 329

Query: 45  ------MASIHPCRHAEVMKKIIETVLE-------------------------------- 66
                 +ASIHPC+HA +M+++++   E                                
Sbjct: 330 KSLAVHVASIHPCKHANMMRRMLQVFHEAENSSKGKSATCGTSSSEHPSSSSTTSSLLTL 389

Query: 67  -------------GGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
                           ++ V MYL++FL+F+ S++PT+E D  Q  
Sbjct: 390 MMQRARGMRPTNLANNQVSVDMYLVLFLQFMASIMPTMELDTAQRL 435



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/25 (80%), Positives = 22/25 (88%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNE 236
           RTYD  ITYDKYYQTPR+WL GY+E
Sbjct: 256 RTYDCMITYDKYYQTPRMWLLGYDE 280


>gi|297727819|ref|NP_001176273.1| Os10g0560450 [Oryza sativa Japonica Group]
 gi|255679632|dbj|BAH95001.1| Os10g0560450 [Oryza sativa Japonica Group]
          Length = 202

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 3/101 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEAGDPSKRKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   ++        + ++ +++D EGW+ TH
Sbjct: 73  LVTRNVPCVRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATH 113


>gi|18873853|gb|AAL79799.1|AC079874_22 autophagocytosis protein AUT1-like [Oryza sativa Japonica Group]
          Length = 241

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 3/101 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEAGDPSKRKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   ++        + ++ +++D EGW+ TH
Sbjct: 73  LVTRNVPCVRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATH 113



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 13/92 (14%)

Query: 161 DDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITY 220
           +++E+  DM+ +E++G     + S+A   P       P  D     +I+RTRTYD+ ITY
Sbjct: 154 EEEEDIPDMDTYEDTG-----NDSVATAQPSYFVAEEPEDD-----NILRTRTYDVSITY 203

Query: 221 DKYYQTPRLWLYGYNE-RFKGKENLVL--ISK 249
           DKYYQTPR+WL GY+E R   K  LV   ISK
Sbjct: 204 DKYYQTPRVWLTGYDESRMPLKPELVFEDISK 235


>gi|340503189|gb|EGR29802.1| hypothetical protein IMG5_148300 [Ichthyophthirius multifiliis]
          Length = 240

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 66/91 (72%), Gaps = 1/91 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++  PLT +++++D+  +YA KTVT E HPHL G   AS+HPC+HA+V+K +++T+   G
Sbjct: 149 ENNNPLTQEEIFQDIINEYANKTVTFEEHPHL-GTQQASLHPCKHAKVIKHMVDTIQGNG 207

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           G +  HM + IFLKF+ SVIPTIEYD   +F
Sbjct: 208 GIIEPHMAIQIFLKFLASVIPTIEYDIANDF 238



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M  + N +    +G+   L     ES F + G +T  EFV +GD L+  CP+W+W +   
Sbjct: 1   MDYIKNKLNNVRMGITTALIDPPTESIFFQEGQLTVNEFVQSGDRLIQSCPSWKWKNAIS 60

Query: 314 SKAK-SYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
            K + + LP +KQ+L+ + VPC +R  ++   +E   I E   +E+ WV
Sbjct: 61  DKYQNNLLPSDKQYLLLERVPCNQRICEL---QENINIQEKLDNEDDWV 106



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIK 140
            T +++++D+  +YA KTVT E HPHL G   AS+HPC+  K
Sbjct: 154 LTQEEIFQDIINEYANKTVTFEEHPHL-GTQQASLHPCKHAK 194


>gi|222613263|gb|EEE51395.1| hypothetical protein OsJ_32453 [Oryza sativa Japonica Group]
          Length = 260

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 3/101 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEAGDPSKRKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   ++        + ++ +++D EGW+ TH
Sbjct: 73  LVTRNVPCVRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATH 113



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 13/92 (14%)

Query: 161 DDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITY 220
           +++E+  DM+ +E++G     + S+A   P       P  D     +I+RTRTYD+ ITY
Sbjct: 154 EEEEDIPDMDTYEDTG-----NDSVATAQPSYFVAEEPEDD-----NILRTRTYDVSITY 203

Query: 221 DKYYQTPRLWLYGYNE-RFKGKENLVL--ISK 249
           DKYYQTPR+WL GY+E R   K  LV   ISK
Sbjct: 204 DKYYQTPRVWLTGYDESRMPLKPELVFEDISK 235


>gi|409045194|gb|EKM54675.1| hypothetical protein PHACADRAFT_258671 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 369

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 9/107 (8%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            V +YL+PVLKESKF+E G +TPEEF+AAGD L +    W W   D  K + +LP +KQ+
Sbjct: 10  AVRDYLSPVLKESKFKEHGRITPEEFIAAGDFLTYKFGVWTWEKADPGKTRDFLPADKQY 69

Query: 327 LITKNVPCPRRCKQIDYC---EEKQKII------ENEQDEEGWVDTH 364
           L+T+ VPC RR   + Y    E+ ++++         ++E+ WV+TH
Sbjct: 70  LMTRGVPCLRRATALAYTDADEDAERLVSFGELSSTGKEEDEWVETH 116



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 43/130 (33%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE----TVLE-- 66
           PLT  Q+++D+S ++AKKTVT+E  PH      AS+HPCRHAEVMKK+IE    +V+E  
Sbjct: 240 PLTPSQIFQDISAEHAKKTVTIEPFPHSNSLQAASVHPCRHAEVMKKVIERMNQSVIEEQ 299

Query: 67  --------------GGGE-----------------------LGVHMYLIIFLKFVQSVIP 89
                          G +                       + V  YL++FLKF+ S++P
Sbjct: 300 QAQRKGTSAAAAKDKGAQKKWLFRRASGNNVKDAQDEDIEGMRVDFYLVVFLKFIASIVP 359

Query: 90  TIEYDFTQNF 99
           TIE D T +F
Sbjct: 360 TIEVDSTTSF 369



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 4/51 (7%)

Query: 190 PEKQSPSSPAGDSQEC----GDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           P+  SP++   D  +     G++++ RTYD+ I+YDKYYQTPRLWL GY+E
Sbjct: 186 PKVTSPTAGVIDGSQVEVAKGNLLQVRTYDVLISYDKYYQTPRLWLIGYDE 236



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 68  GGELGVHMY--LIIFLKFVQS-VIPTIEYDFTQN-FTVDQMYEDVSQDYAKKTVTMESHP 123
           G  L V  Y  LI + K+ Q+  +  I YD   N  T  Q+++D+S ++AKKTVT+E  P
Sbjct: 206 GNLLQVRTYDVLISYDKYYQTPRLWLIGYDENGNPLTPSQIFQDISAEHAKKTVTIEPFP 265

Query: 124 HLPGPPMASIHPCR 137
           H      AS+HPCR
Sbjct: 266 HSNSLQAASVHPCR 279


>gi|429862846|gb|ELA37453.1| autophagocytosis protein [Colletotrichum gloeosporioides Nara gc5]
          Length = 343

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 16/121 (13%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +N+++       +   PV  +S FR+TG +TP+EFVAAGD+LV+  PTW W  
Sbjct: 1   MNLLYSTVNTLR-------DRYAPVSNKSTFRQTGEITPDEFVAAGDYLVYKFPTWSWGD 53

Query: 311 GD-ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ----DEEGWVD 362
            D +S+  SYLPP KQ+L+T+NVPC RR    D+  +   ++ ++E  +    DE+GW+ 
Sbjct: 54  ADADSRRASYLPPGKQYLVTRNVPCNRRLDD-DFAGDAGHEEAVVEGARGGDDDEDGWLR 112

Query: 363 T 363
           T
Sbjct: 113 T 113



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 54/141 (38%), Gaps = 57/141 (40%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETV------- 64
           PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VMK +++         
Sbjct: 200 PLPPKSMMDDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLDRADAALRIR 259

Query: 65  ---LEGGGELG----------------------------------------------VHM 75
              L  G  +G                                              V  
Sbjct: 260 REKLRAGKAVGGDQGMEGLVDELGKLDVKDAQAIADKNDEWEEVEQSEVDDQEVAIRVDQ 319

Query: 76  YLIIFLKFVQSVIPTIEYDFT 96
           YL++FLKF+ SV P IE+DFT
Sbjct: 320 YLVVFLKFMASVTPGIEHDFT 340



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 4/37 (10%)

Query: 199 AGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYN 235
           AG+++  G     RTY L+I Y  YY+TPRL+L GYN
Sbjct: 163 AGENKNSG----RRTYTLYIMYSAYYRTPRLYLSGYN 195


>gi|302921507|ref|XP_003053297.1| hypothetical protein NECHADRAFT_36177 [Nectria haematococca mpVI
           77-13-4]
 gi|256734237|gb|EEU47584.1| hypothetical protein NECHADRAFT_36177 [Nectria haematococca mpVI
           77-13-4]
          Length = 347

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 11/117 (9%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +N +  T   + +  TPV  +S FR+TG +TPEEFVAAGD+LV+  PTW W   D  + +
Sbjct: 1   MNYIYSTVNTLRDRYTPVTHKSTFRQTGQITPEEFVAAGDYLVYKFPTWSWGDADSPERR 60

Query: 318 -SYLPPNKQFLITKNVPCPRRCK---QIDYCEEKQKIIENE-------QDEEGWVDT 363
            SYLPP KQFL+T+NVPC RR       D   E+  + + E        DE+GW+ T
Sbjct: 61  VSYLPPGKQFLVTRNVPCHRRLNDDFAGDAGHEEALVNDGEDFKGGAGDDEDGWLRT 117



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 205 PLPPHDMMEDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLD 255



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 4/36 (11%)

Query: 199 AGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
             DS+  G     RTY L+I Y  YY+TPRL+L GY
Sbjct: 168 GADSKSSG----RRTYTLYIMYTTYYRTPRLYLSGY 199


>gi|358384898|gb|EHK22495.1| hypothetical protein TRIVIDRAFT_78861 [Trichoderma virens Gv29-8]
          Length = 347

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 19/125 (15%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +N+++       +  TPV   S FR TG +TPEEFVAAGD+LV+  PTW W+ 
Sbjct: 1   MNYLYSTVNTLR-------DRYTPVTHTSTFRNTGQITPEEFVAAGDYLVYKFPTWSWSD 53

Query: 311 GD-ESKAKSYLPPNKQFLITKNVPCPRRCK---QIDYCEEKQKIIENE--------QDEE 358
            D ES   SYLPP KQFL+T+NVPC RR       D   E+  I E +         D++
Sbjct: 54  ADNESLRASYLPPGKQFLVTRNVPCHRRLNDDFAGDAAHEESIINEGDDFKNKADAADDD 113

Query: 359 GWVDT 363
           GW+ T
Sbjct: 114 GWLRT 118



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPG-PPMASIHPCRHAEVMKKIIE 62
           PL   +M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 204 PLPPMKMMEDIVGDYKDKTVTLEEFPFFANHVRMASVHPCKHAPVMKSLLD 254



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 204 ECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           E G+  R RTY+L+I Y  YY+TPRL+L GY
Sbjct: 169 EPGNTAR-RTYNLYIMYTPYYRTPRLYLSGY 198


>gi|167534348|ref|XP_001748852.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772814|gb|EDQ86462.1| predicted protein [Monosiga brevicollis MX1]
          Length = 341

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG 69
           S  PL  D+   D S D+A KTVT+E HPHLP     SIHPC+HAE MK +++TV +G  
Sbjct: 229 SGEPLQGDEWESDFSVDHANKTVTLEQHPHLPDH-WVSIHPCKHAEAMKNMMDTVSDGAA 287

Query: 70  ELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            L V  Y++IFLKF+Q +IP+I YDFT +F V
Sbjct: 288 -LDVKYYMVIFLKFLQVIIPSISYDFTSSFQV 318



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 201 DSQECGDIVR-TRTYDLHITYDKYYQTPRLWLYGY---NERFKGKE 242
           DS    + VR  RTYD+ I YD +Y TPR+WL GY    E  +G E
Sbjct: 192 DSGAAEETVRQLRTYDITIHYDGHYSTPRVWLRGYAASGEPLQGDE 237



 Score = 41.2 bits (95), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           D+   D S D+A KTVT+E HPHLP     SIHPC+
Sbjct: 236 DEWESDFSVDHANKTVTLEQHPHLPD-HWVSIHPCK 270



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 7/56 (12%)

Query: 309 ASGDESKAKSYLPPNKQFLITKNVPC-PRRCKQIDYCEEKQKIIENEQDEEGWVDT 363
            SG   K + +LP +KQ+L T+NVPC P+  +++      +++I    D+E WV T
Sbjct: 90  GSGLPEKQRKHLPADKQYLQTRNVPCFPQEDREV------EEMIVEGSDDEAWVAT 139


>gi|413933318|gb|AFW67869.1| hypothetical protein ZEAMMB73_167159 [Zea mays]
          Length = 233

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 3/100 (3%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLP NKQF
Sbjct: 50  GTVERVTAPCTVSAFLEKGVLSVPEFILAGDNLVAKCPTWSWEAGDPSKRKPYLPANKQF 109

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   +  +Y     +++ +E D EGW+ TH
Sbjct: 110 LVTRNVPCLRRAISVEEEYDAAGAEVVLDE-DGEGWLATH 148


>gi|346977458|gb|EGY20910.1| Atg3p [Verticillium dahliae VdLs.17]
          Length = 345

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 15/119 (12%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N + S +N+++       +  TPV   S FR++G +TPEEFVAAGD+LV+  PTW W   
Sbjct: 2   NLLYSTVNTLR-------DKYTPVTHTSTFRQSGQITPEEFVAAGDYLVYKFPTWSWGDA 54

Query: 312 DE-SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ---DEEGWVDT 363
           D+ S+  SYLP  KQ+L+T+NVPC RR    D+  +   ++ ++E +    DE+GW+ T
Sbjct: 55  DDASRRASYLPAGKQYLVTRNVPCHRRLND-DFAGDAGHEESVVEGKSGGDDEDGWLRT 112



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 54/145 (37%), Gaps = 58/145 (40%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETV------- 64
           PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VM+ +++         
Sbjct: 201 PLPPKSMMDDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHAPVMRTLLDRADAALRIR 260

Query: 65  -------LEGGGELG-------------------------------------------VH 74
                     GGE G                                           V 
Sbjct: 261 REKLKAGKSAGGEQGMEGLVDEIGKLDVKAAEAAADKGNDEWEQVEQSEADEQEVAIRVD 320

Query: 75  MYLIIFLKFVQSVIPTIEYDFTQNF 99
            YL++FLKF+ SV P IE+DFT   
Sbjct: 321 QYLVVFLKFIASVTPGIEHDFTMGI 345



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+I Y  YY+TPRL+L GY
Sbjct: 173 RTYTLYIMYSAYYRTPRLYLSGY 195


>gi|237839397|ref|XP_002368996.1| autophagocytosis associated protein, putative [Toxoplasma gondii
           ME49]
 gi|211966660|gb|EEB01856.1| autophagocytosis associated protein, putative [Toxoplasma gondii
           ME49]
          Length = 397

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G +  GV    PL  ++++ED+  DYA KTVT++ HP   G P ASIHPCRHA VMKK+
Sbjct: 292 FGYSENGV----PLLPEEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCRHASVMKKV 346

Query: 61  IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
           +++ +E G      + L+I LKFV SVIPTIEYDFT +
Sbjct: 347 VDSWVESGVRPRHDLALLILLKFVSSVIPTIEYDFTMD 384



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 2/66 (3%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDES--KAKSYLPPNKQFLITKNVPCPR 336
           S F   G++TP EFV AGD L H  PTWQW     +  +A  +LP +KQ+LITKNVPC R
Sbjct: 87  SSFISKGMLTPSEFVDAGDLLTHKFPTWQWKGVGPTGKRASGWLPEDKQYLITKNVPCYR 146

Query: 337 RCKQID 342
           R + +D
Sbjct: 147 RVRDMD 152



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 24/112 (21%)

Query: 126 PGPPMASIHPCRAIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSI 185
           P PP     P +   S ASNQ  S           DD  + ++  D +     ++ DP+ 
Sbjct: 208 PAPPT----PTQTSASTASNQENSLR---------DDVPDLINFADID-CLVQEDDDPAA 253

Query: 186 ANIPPE-KQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           A  P   + SP +         +IV  R+YDL ITYDKY+QTPR+WL+GY+E
Sbjct: 254 AEAPSVVRTSPDA---------EIVAARSYDLSITYDKYFQTPRIWLFGYSE 296



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++++ED+  DYA KTVT++ HP   G P ASIHPCR
Sbjct: 304 EEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCR 338


>gi|221483363|gb|EEE21682.1| autophagocytosis associated protein, putative [Toxoplasma gondii
           GT1]
          Length = 398

 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G +  GV    PL  ++++ED+  DYA KTVT++ HP   G P ASIHPCRHA VMKK+
Sbjct: 293 FGYSENGV----PLLPEEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCRHASVMKKV 347

Query: 61  IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
           +++ +E G      + L+I LKFV SVIPTIEYDFT +
Sbjct: 348 VDSWVESGVRPRHDLALLILLKFVSSVIPTIEYDFTMD 385



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 2/66 (3%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDES--KAKSYLPPNKQFLITKNVPCPR 336
           S F   G++TP EFV AGD L H  PTWQW     +  +A  +LP +KQ+LITKNVPC R
Sbjct: 88  SSFISKGMLTPSEFVDAGDLLTHKFPTWQWKGVGPTGKRASGWLPEDKQYLITKNVPCYR 147

Query: 337 RCKQID 342
           R + +D
Sbjct: 148 RVRDMD 153



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 24/112 (21%)

Query: 126 PGPPMASIHPCRAIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSI 185
           P PP     P +   S ASNQ  S           DD  + ++  D +     ++ DP+ 
Sbjct: 209 PAPPT----PTQTSASTASNQENSLR---------DDVPDLINFADID-CLVQEDDDPAA 254

Query: 186 ANIPPE-KQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           A  P   + SP +         +IV  R+YDL ITYDKY+QTPR+WL+GY+E
Sbjct: 255 AEAPSVVRTSPDA---------EIVAARSYDLSITYDKYFQTPRIWLFGYSE 297



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++++ED+  DYA KTVT++ HP   G P ASIHPCR
Sbjct: 305 EEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCR 339


>gi|221507847|gb|EEE33434.1| autophagocytosis associated protein, putative [Toxoplasma gondii
           VEG]
          Length = 398

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G +  GV    PL  ++++ED+  DYA KTVT++ HP   G P ASIHPCRHA VMKK+
Sbjct: 293 FGYSENGV----PLLPEEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCRHASVMKKV 347

Query: 61  IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
           +++ +E G      + L+I LKFV SVIPTIEYDFT +
Sbjct: 348 VDSWVESGVRPRHDLALLILLKFVSSVIPTIEYDFTMD 385



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 2/66 (3%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDES--KAKSYLPPNKQFLITKNVPCPR 336
           S F   G++TP EFV AGD L H  PTWQW     +  +A  +LP +KQ+LITKNVPC R
Sbjct: 88  SSFISKGMLTPSEFVDAGDLLTHKFPTWQWKGVGPTGKRASGWLPEDKQYLITKNVPCYR 147

Query: 337 RCKQID 342
           R + +D
Sbjct: 148 RVRDMD 153



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 24/112 (21%)

Query: 126 PGPPMASIHPCRAIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSI 185
           P PP     P +   S ASNQ  S           DD  + ++  D +     ++ DP+ 
Sbjct: 209 PAPPT----PTQTSASTASNQENSLR---------DDVPDLINFADID-CLVQEDDDPAA 254

Query: 186 ANIPPE-KQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           A  P   + SP +         +I+  R+YDL ITYDKY+QTPR+WL+GY+E
Sbjct: 255 AEAPSVVRTSPDA---------EIIAARSYDLSITYDKYFQTPRIWLFGYSE 297



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++++ED+  DYA KTVT++ HP   G P ASIHPCR
Sbjct: 305 EEIFEDILTDYAAKTVTVDPHP-CTGIPTASIHPCR 339


>gi|414586537|tpg|DAA37108.1| TPA: hypothetical protein ZEAMMB73_873066 [Zea mays]
 gi|414864797|tpg|DAA43354.1| TPA: hypothetical protein ZEAMMB73_507475 [Zea mays]
          Length = 169

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 3/100 (3%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLP NKQF
Sbjct: 13  GTVERVTAPRTVSAFLEKGVLSVPEFILAGDNLVAKCPTWSWEAGDPSKRKPYLPANKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   +  +Y     +++ +E D EGW+ TH
Sbjct: 73  LVTRNVPCLRRAISVEEEYDAAGAEVVLDE-DGEGWLATH 111


>gi|389646231|ref|XP_003720747.1| autophagy-like protein 3 [Magnaporthe oryzae 70-15]
 gi|71152284|sp|Q51LD2.1|ATG3_MAGO7 RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|86196688|gb|EAQ71326.1| hypothetical protein MGCH7_ch7g733 [Magnaporthe oryzae 70-15]
 gi|351638139|gb|EHA46004.1| autophagy-like protein 3 [Magnaporthe oryzae 70-15]
 gi|440473879|gb|ELQ42653.1| autophagy-related protein 3 [Magnaporthe oryzae Y34]
 gi|440486615|gb|ELQ66464.1| autophagy-related protein 3 [Magnaporthe oryzae P131]
          Length = 350

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 17/122 (13%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N + SV+N+++       +   PV   S FR+TG +TPEEFVAAGD+LV   PTW W   
Sbjct: 2   NSLYSVVNTLR-------DRYAPVSHTSTFRQTGEITPEEFVAAGDYLVFKFPTWSWGDA 54

Query: 312 D-ESKAKSYLPPNKQFLITKNVPCPRRCKQ---IDYCEEKQKIIENEQ------DEEGWV 361
           D ES+  S+LPP KQFL+T+NVPC RR  +    D   E+  + + ++      D++GW+
Sbjct: 55  DSESRRASHLPPGKQFLVTRNVPCNRRLNENFAGDAGLEEAVVDDGDEFKGSKGDDDGWL 114

Query: 362 DT 363
            T
Sbjct: 115 RT 116



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 7/62 (11%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKI 60
           GAN Q      PL    M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +
Sbjct: 200 GANGQ------PLPPHNMMEDIMGDYKDKTVTLEDFPFFANNIKMASVHPCKHAPVMKTL 253

Query: 61  IE 62
           ++
Sbjct: 254 LD 255



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 201 DSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYN 235
           D+   G     RTY L+I Y  YY+TPRL+L GY 
Sbjct: 166 DTDASGQTSSRRTYTLYIMYSPYYRTPRLYLSGYG 200


>gi|216963229|gb|ACJ73911.1| autophagy-related 3 variant 2 [Zea mays]
          Length = 132

 Score = 97.1 bits (240), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 3/107 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLP NKQF
Sbjct: 13  GTVERVTAPRTVSAFLEKGVLSVPEFILAGDNLVAKCPTWSWEAGDPSKRKPYLPANKQF 72

Query: 327 LITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTHHYDETTG 371
           L+T+NVPC RR   +  +Y     +++ +E D EGW+ TH   +  G
Sbjct: 73  LVTRNVPCLRRAISVEEEYDAAGAEVVLDE-DGEGWLATHGVQDRRG 118


>gi|218185007|gb|EEC67434.1| hypothetical protein OsI_34638 [Oryza sativa Indica Group]
          Length = 373

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 3/101 (2%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W + D SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEADDPSKRKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQIDY---CEEKQKIIENEQDEEGWVDTH 364
           L+T+NVPC RR   ++        + ++ +++D EGW+ TH
Sbjct: 73  LVTRNVPCVRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATH 113



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 47/62 (75%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           +SR PL  + ++ED+SQD+A+KTVT+E HPHL     AS+HPC+HA VMKKII+ ++  G
Sbjct: 219 ESRMPLKPEVVFEDISQDHARKTVTIEDHPHLSAGKHASVHPCKHAAVMKKIIDVLMSRG 278

Query: 69  GE 70
            E
Sbjct: 279 VE 280



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 10/82 (12%)

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTY 214
           S  ++ +++E+  DM+ +E++G     + S+A   P       P  D     +I+RTRTY
Sbjct: 148 SAGKKAEEEEDIPDMDTYEDTG-----NDSVATAQPSYFVAEEPEDD-----NILRTRTY 197

Query: 215 DLHITYDKYYQTPRLWLYGYNE 236
           D+ ITYDKYYQTPR+WL GY+E
Sbjct: 198 DVSITYDKYYQTPRVWLTGYDE 219



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++ED+SQD+A+KTVT+E HPHL     AS+HPC+
Sbjct: 229 VFEDISQDHARKTVTIEDHPHLSAGKHASVHPCK 262


>gi|380489531|emb|CCF36643.1| autophagy-like protein 3 [Colletotrichum higginsianum]
          Length = 347

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 8/89 (8%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +N+++       +  TPV  +S FR+TG +TPEEFVAAGD+LV+  PTW W  
Sbjct: 1   MNLLYSTVNTLR-------DRYTPVSHKSTFRQTGQITPEEFVAAGDYLVYKFPTWSWGD 53

Query: 311 GD-ESKAKSYLPPNKQFLITKNVPCPRRC 338
            D ES+  SYLP  KQFL+T+NVPC RR 
Sbjct: 54  ADSESRRVSYLPTGKQFLVTRNVPCNRRL 82



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 57/151 (37%), Gaps = 62/151 (41%)

Query: 4   NNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           NNQ      PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 202 NNQ------PLPPHAMMDDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLD 255

Query: 63  TV----------LEGGGELG---------------------------------------- 72
                       L  G  +G                                        
Sbjct: 256 RADAALRIRREKLRAGRAVGGDQGMEGLVDELGRLDVRDAQAAADKDEWEEVEQSEVDEQ 315

Query: 73  -----VHMYLIIFLKFVQSVIPTIEYDFTQN 98
                V  YL++FLKF+ SV P IE+DFT  
Sbjct: 316 EVAIRVDQYLVVFLKFMASVTPGIEHDFTMG 346



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 201 DSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYN 235
           D+ + G     RTY L+I Y  YY+TPRL+L GY+
Sbjct: 166 DAGDSGKNSGRRTYTLYIMYSTYYRTPRLYLSGYS 200


>gi|50553884|ref|XP_504353.1| YALI0E24453p [Yarrowia lipolytica]
 gi|62899736|sp|Q6C4Q9.1|ATG3_YARLI RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|49650222|emb|CAG79952.1| YALI0E24453p [Yarrowia lipolytica CLIB122]
          Length = 366

 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 6/106 (5%)

Query: 255 QSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDES 314
           +S +  V+  A  + EYLTPV   S FR TG +TP+EFV AGD+LV   PTW WAS  +S
Sbjct: 74  KSTMLHVRAAASSLREYLTPVSNTSTFRTTGEITPDEFVKAGDYLVEKFPTWSWASASKS 133

Query: 315 KAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGW 360
           K + +LPP+KQ L+T++VP   R   +         +   ++E+GW
Sbjct: 134 KVRDFLPPDKQVLVTRHVPSHVRASTV------SGPVTLGEEEDGW 173



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 30/117 (25%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV------- 64
           +PLT + M+ED+  +Y  KTVT+E         M +IHPC+HA VM+ ++E V       
Sbjct: 248 SPLTPEDMFEDIIPEYRDKTVTIERPTFQDNITMVAIHPCKHANVMRVLMERVEAKGDKD 307

Query: 65  -LEGGGELGVH----------------------MYLIIFLKFVQSVIPTIEYDFTQN 98
              G  +LGV                        YL+ FLKF+ SV P IE+D+T +
Sbjct: 308 ITRGVAKLGVADADDGEGEEEWEEVENSAMRVDQYLVTFLKFIASVTPGIEHDYTMS 364


>gi|288190835|gb|ADC43782.1| autophagy protein 3 [Acanthamoeba castellanii]
          Length = 304

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELGV 73
           LT +Q++ D+SQD+A+KTVT+++HPH+     A IHPC+H+ VMKKII    E G E  V
Sbjct: 218 LTPNQVFMDISQDHAQKTVTIDTHPHMQTS-CAYIHPCKHSSVMKKIILRQAECGKEPRV 276

Query: 74  HMYLIIFLKFVQSVIPTIEYDFT 96
             YL +FLKF+ +VIPTIEYD+T
Sbjct: 277 DQYLFLFLKFLSAVIPTIEYDYT 299



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 5/92 (5%)

Query: 276 LKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCP 335
           L  SK+   GV+TPEEFV AGD LV+ CPTW W  GD +KA  YLP +KQFLIT+ VPC 
Sbjct: 26  LTSSKYLTEGVLTPEEFVQAGDLLVYKCPTWSWEGGDPAKAVPYLPKDKQFLITRKVPCL 85

Query: 336 RRCKQIDYC---EEKQKIIENEQDEEGWVDTH 364
            R   ++      + Q I+ +   +EGWV+TH
Sbjct: 86  MRAAALEKSANEAQNQDIVID--GDEGWVETH 115



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 38/50 (76%)

Query: 191 EKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFKG 240
           E + PS+ A + ++   I++TRTYD+ ITYDKYYQTP++WL+GY+E   G
Sbjct: 168 EDEDPSALAKEPEDSDLILKTRTYDISITYDKYYQTPKVWLFGYDENGNG 217



 Score = 44.7 bits (104), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 4/63 (6%)

Query: 93  YDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR--AIKSKASNQTQS 149
           YD   N  T +Q++ D+SQD+A+KTVT+++HPH+     A IHPC+  ++  K   +   
Sbjct: 211 YDENGNGLTPNQVFMDISQDHAQKTVTIDTHPHMQT-SCAYIHPCKHSSVMKKIILRQAE 269

Query: 150 CNK 152
           C K
Sbjct: 270 CGK 272


>gi|350297220|gb|EGZ78197.1| autophagy-related protein 3 [Neurospora tetrasperma FGSC 2509]
          Length = 353

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 8/113 (7%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N ++ TA  + +  TPV   S FR TG +TPEEFVAAGD+L    P+W WA  D  SK 
Sbjct: 1   MNFLRSTAATLLDKYTPVSHTSTFRNTGQITPEEFVAAGDYLTFKFPSWSWADADSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ---DEEGWVDT 363
             +LPP KQFL+T++VPC RR    D+  +   ++ ++E  +   D++GW+ T
Sbjct: 61  LPFLPPGKQFLVTRHVPCHRRLND-DFAGDAGHEEALVEGNKGGADDDGWLRT 112



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MAS+HPCRHA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPFFSHSVKMASVHPCRHASVMKTLLD 256


>gi|340521355|gb|EGR51589.1| predicted protein [Trichoderma reesei QM6a]
          Length = 351

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 8/89 (8%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +N+++       +  TPV   S FR TG +TPEEFVAAGD+LV+  PTW W+ 
Sbjct: 1   MNYLYSTVNTLR-------DRYTPVTHTSTFRTTGQITPEEFVAAGDYLVYKFPTWSWSD 53

Query: 311 GD-ESKAKSYLPPNKQFLITKNVPCPRRC 338
            D E+   SYLPP KQFL+T+NVPC RR 
Sbjct: 54  ADSEALRASYLPPGKQFLVTRNVPCHRRL 82



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL   +M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 208 PLPPMKMMEDIVGDYKDKTVTLEEFPFFSSRVRMASVHPCKHAPVMKSLLD 258



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 204 ECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           E G+  R RTY+L+I Y  YY+TPRL+L GY
Sbjct: 173 EPGNTAR-RTYNLYIMYTPYYRTPRLYLSGY 202


>gi|85112065|ref|XP_964239.1| hypothetical protein NCU01955 [Neurospora crassa OR74A]
 gi|62899774|sp|Q7SDY2.1|ATG3_NEUCR RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg-3
 gi|28926012|gb|EAA35003.1| hypothetical protein NCU01955 [Neurospora crassa OR74A]
          Length = 352

 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 8/113 (7%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N ++ TA  + +  TPV   S FR TG +TPEEFVAAGD+L    P+W WA  D  SK 
Sbjct: 1   MNFLRSTAATLLDKYTPVSHTSTFRNTGQITPEEFVAAGDYLTFKFPSWSWADADSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ---DEEGWVDT 363
             +LPP KQFL+T++VPC RR    D+  +   ++ ++E  +   D++GW+ T
Sbjct: 61  LPFLPPGKQFLVTRHVPCHRRLND-DFAGDAGHEEALVEGNKGGADDDGWLRT 112



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MAS+HPCRHA VMK +++
Sbjct: 205 PLPPHLMMEDIVGDYKDKTVTLEDFPFFSHSVKMASVHPCRHASVMKTLLD 255


>gi|322709537|gb|EFZ01113.1| autophagocytosis protein [Metarhizium anisopliae ARSEF 23]
          Length = 428

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 255 QSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD-E 313
           Q  +N ++ T   + +  TPV   S FR+TG VTPEEF+AAGD+LV+  PTW W   D E
Sbjct: 48  QGAMNYIRSTVNTLRDRYTPVSHNSTFRQTGQVTPEEFIAAGDYLVYKFPTWSWGDADSE 107

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRC 338
            +  SYLP  KQ+L+T+NVPC RR 
Sbjct: 108 DRRVSYLPAGKQYLVTRNVPCHRRL 132



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 55/146 (37%), Gaps = 56/146 (38%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETV------- 64
           PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VMK +++         
Sbjct: 255 PLPPQSMMDDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLDRADAALRIR 314

Query: 65  ---LEGGGELG---------------------------------------------VHMY 76
              L  G  +G                                             V  Y
Sbjct: 315 RDKLRSGKAVGSDPGMEGLVDEVAKLDVKSAQEAADKDEWEEVEGVDADEQEVAIRVDQY 374

Query: 77  LIIFLKFVQSVIPTIEYDFTQNFTVD 102
           L++FLKF+ SV P IE+DFT     D
Sbjct: 375 LVVFLKFMASVTPGIEHDFTMGVIFD 400



 Score = 38.1 bits (87), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+I Y  YY+TPRL+L GY
Sbjct: 227 RTYTLYIMYSPYYRTPRLYLSGY 249


>gi|400595530|gb|EJP63325.1| autophagy-related protein 3 [Beauveria bassiana ARSEF 2860]
          Length = 371

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKA 316
           +N +  T   + +  TPV   S FR+TG +TPEEFVAAGD+LV+  PTW W    DES+ 
Sbjct: 1   MNYIYSTVNTLRDRYTPVSHTSTFRQTGQITPEEFVAAGDYLVYKFPTWAWGDADDESRR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
            S+LPP KQ+L+T+NVPC RR 
Sbjct: 61  ASHLPPGKQYLVTRNVPCDRRL 82



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 219 PLPPHDMMDDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHAPVMKSLLD 269


>gi|238573145|ref|XP_002387331.1| hypothetical protein MPER_14002 [Moniliophthora perniciosa FA553]
 gi|215442193|gb|EEB88261.1| hypothetical protein MPER_14002 [Moniliophthora perniciosa FA553]
          Length = 79

 Score = 95.1 bits (235), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/74 (58%), Positives = 53/74 (71%)

Query: 275 VLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPC 334
           VLKESKF+E G +TPEEFVAAGD LV+  P W W  GD SKA+ YLP +KQ+LIT+ VPC
Sbjct: 1   VLKESKFKEHGRITPEEFVAAGDFLVYKFPVWTWEKGDTSKARDYLPADKQYLITRGVPC 60

Query: 335 PRRCKQIDYCEEKQ 348
            RR   + Y +  +
Sbjct: 61  LRRATSLAYTDADE 74


>gi|336463560|gb|EGO51800.1| hypothetical protein NEUTE1DRAFT_89550 [Neurospora tetrasperma FGSC
           2508]
          Length = 352

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 8/113 (7%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N ++ TA    +  TPV   S FR TG +TPEEFVAAGD+L    P+W WA  D  SK 
Sbjct: 1   MNFLRSTAATFLDKYTPVSHTSTFRNTGQITPEEFVAAGDYLTFKFPSWSWADADSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ---DEEGWVDT 363
             +LPP KQFL+T++VPC RR    D+  +   ++ ++E  +   D++GW+ T
Sbjct: 61  LPFLPPGKQFLVTRHVPCHRRLND-DFAGDAGHEEALVEGNKGGADDDGWLRT 112



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MAS+HPCRHA VMK +++
Sbjct: 205 PLPPHLMMEDIVGDYKDKTVTLEDFPFFSHSVKMASVHPCRHASVMKTLLD 255


>gi|46129449|ref|XP_389076.1| hypothetical protein FG08900.1 [Gibberella zeae PH-1]
          Length = 349

 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 20/125 (16%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +N+++       +  TPV  +S FR+TG +TPEEFVAAGD+LV+  PTW W  
Sbjct: 1   MNFLYSTVNTLR-------DRYTPVSHKSTFRQTGQITPEEFVAAGDYLVYKFPTWSWGD 53

Query: 311 GDESKAK-SYLPPNKQFLITKNVPCPRRCKQIDYCEEK--QKIIENE---------QDEE 358
            D  + + S+LPP KQFL+T+NVPC RR    D+  +   ++ + N+          DE+
Sbjct: 54  ADSPERRVSHLPPGKQFLVTRNVPCHRRLND-DFAGDAGHEEALVNDGDDFKGNAGDDED 112

Query: 359 GWVDT 363
           GW+ T
Sbjct: 113 GWLRT 117



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 205 PLPPTDMTEDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLD 255



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+I Y  YY+TPRL+L GY
Sbjct: 177 RTYTLYIMYSPYYRTPRLYLSGY 199


>gi|408392215|gb|EKJ71573.1| hypothetical protein FPSE_08212 [Fusarium pseudograminearum CS3096]
          Length = 349

 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 18/124 (14%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +N+++       +  TPV  +S FR+TG +TPEEFVAAGD+LV+  PTW W  
Sbjct: 1   MNFLYSTVNTLR-------DRYTPVSHKSTFRQTGQITPEEFVAAGDYLVYKFPTWSWGD 53

Query: 311 GDESKAK-SYLPPNKQFLITKNVPCPRRCK---QIDYCEEKQKIIENEQ-------DEEG 359
            D  + + S+LPP KQFL+T+NVPC RR       D   E+  + + +        DE+G
Sbjct: 54  ADSPERRVSHLPPGKQFLVTRNVPCHRRLNDDFAGDAGHEEALVNDGDDFKGNTGGDEDG 113

Query: 360 WVDT 363
           W+ T
Sbjct: 114 WLRT 117



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 205 PLPPTDMTEDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLD 255



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+I Y  YY+TPRL+L GY
Sbjct: 177 RTYTLYIMYSPYYRTPRLYLSGY 199


>gi|353236635|emb|CCA68625.1| related to AUT1-essential for autophagocytosis [Piriformospora
           indica DSM 11827]
          Length = 346

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 6/98 (6%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           ++PVL+ESKF+E G +TPEEFV AGD LV+  P W W  GD +K + +LP +KQ+L+ + 
Sbjct: 1   MSPVLRESKFKEHGKITPEEFVIAGDFLVYKFPLWSWQKGD-AKPREHLPADKQYLLLQG 59

Query: 332 VPCPRRCKQIDYCE-----EKQKIIENEQDEEGWVDTH 364
            PCPRR   + Y +     EK   +     E+ WV TH
Sbjct: 60  APCPRRATSLVYTDAEEDAEKMLNMGGAAQEDEWVQTH 97



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 57/143 (39%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEG----- 67
           PL   Q++EDVS D+A KTVT+E  PH     +AS+HPC+HA VMKK+IE +  G     
Sbjct: 203 PLKPQQVFEDVSADHANKTVTIEPFPHSTSLTLASVHPCKHASVMKKVIERMNAGMVEEQ 262

Query: 68  --------------------------GGEL--------------------------GVHM 75
                                     GG L                           V  
Sbjct: 263 RKSHQTAGPSTPVAAASSSTGTKRWLGGALRKVTGSGTSTPAKSPVSESPEGEEGMRVDW 322

Query: 76  YLIIFLKFVQSVIPTIEYDFTQN 98
           YL++FLKF+ S++PTIE D T +
Sbjct: 323 YLVVFLKFLSSIVPTIELDSTSS 345



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 17/99 (17%)

Query: 138 AIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSS 197
           A+ ++  N     N+  S +E  D +EE  D+ED   S            +   K +P  
Sbjct: 118 AVAAEMQNMNLKGNEMPSADEIPDMEEE--DLEDALNSNI----------VASAKAAPVE 165

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
             G      +I +TR YD  ITYDK YQTPRLWL GY+E
Sbjct: 166 AGG-----ANIQKTRKYDAMITYDKLYQTPRLWLLGYDE 199



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 26/35 (74%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q++EDVS D+A KTVT+E  PH     +AS+HPC+
Sbjct: 208 QVFEDVSADHANKTVTIEPFPHSTSLTLASVHPCK 242


>gi|326430553|gb|EGD76123.1| hypothetical protein PTSG_00830 [Salpingoeca sp. ATCC 50818]
          Length = 305

 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 1/89 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL  D    D S ++  KTVT E HPHL G   ASIHPC+HAE MK  +E ++   G + 
Sbjct: 212 PLQGDAWKADFSPEHVDKTVTFERHPHL-GYHCASIHPCKHAEGMKNTVELLVGDQGAVS 270

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
              Y++IFLKF+QSVIP IEYD+T  F V
Sbjct: 271 AKFYMVIFLKFIQSVIPNIEYDYTSKFEV 299



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 6/89 (6%)

Query: 276 LKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPC- 334
           + +S F +TG +T +EFV AGD LV + P+W WA+G     +S+LP +KQFLI+KNVPC 
Sbjct: 23  ITDSNFSKTGKLTAKEFVEAGDFLVANFPSWSWAAGLAENKRSHLPDDKQFLISKNVPCF 82

Query: 335 PRRCKQIDYCEEKQKIIENEQDEEGWVDT 363
           PR  ++I     +   ++ + D++GWV T
Sbjct: 83  PREEREI-----QLDELKLDDDDDGWVQT 106



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 3/38 (7%)

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYN 235
           P+GD+    +I + R+YD+ I YD +Y TPR+WL+GY+
Sbjct: 173 PSGDAD---NIKKLRSYDISIHYDAHYSTPRVWLFGYD 207


>gi|345311174|ref|XP_003429068.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG3-like
           [Ornithorhynchus anatinus]
          Length = 163

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 74/98 (75%), Gaps = 4/98 (4%)

Query: 8   VKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVM----KKIIET 63
           ++ R PLTV+ MYED+SQD+ KKTVT+E+HPHLP PP+ S+HPCR   ++     + +E 
Sbjct: 66  LQQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPLCSVHPCRSVSLLLVYSLRSVER 125

Query: 64  VLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           +  G G  G   YL+IFLKFVQ+VIPTIEY++T++FT+
Sbjct: 126 LGRGWGREGASKYLLIFLKFVQAVIPTIEYNYTRHFTM 163



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIKSKASNQTQSCNKPNST 156
           Q  TV+ MYED+SQD+ KKTVT+E+HPHLP PP+ S+HPCR++        +S  +    
Sbjct: 70  QPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPLCSVHPCRSVSLLLVYSLRSVERLGRG 129

Query: 157 EEEDDDDEEALDMEDFEES 175
              +   +  L    F ++
Sbjct: 130 WGREGASKYLLIFLKFVQA 148


>gi|342878033|gb|EGU79444.1| hypothetical protein FOXB_10029 [Fusarium oxysporum Fo5176]
          Length = 347

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 13/118 (11%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +N +  T   + +  TPV  +S FR+TG +TPEEF+AAGD+LV+  PTW W   D  + +
Sbjct: 1   MNYIYSTVNTLRDRYTPVSHKSTFRQTGQITPEEFLAAGDYLVYKFPTWSWGDADSPEQR 60

Query: 318 -SYLPPNKQFLITKNVPCPRRCKQIDYCEEK--QKIIENE---------QDEEGWVDT 363
            S+LPP KQFL+T+NVPC RR    D+  +   ++ + N+          DE+GW+ T
Sbjct: 61  VSHLPPGKQFLVTRNVPCHRRLND-DFAGDAGHEEALVNDGDDFKGATGDDEDGWLRT 117



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 58/144 (40%), Gaps = 55/144 (38%)

Query: 8   VKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETV-- 64
           + S  PL  + M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +++    
Sbjct: 201 LASGQPLPPNDMTEDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLDRADA 260

Query: 65  --------LEGGG------------ELG-------------------------------- 72
                   L  G             E+G                                
Sbjct: 261 ALRLRREKLRAGNSQTPSGMEGLVDEIGKLDVKGAQEAADKDEWEEVQETEIDDQEVAIR 320

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFT 96
           V  YL++FLKF+ SV P IE+DFT
Sbjct: 321 VDQYLVVFLKFMASVTPGIEHDFT 344



 Score = 37.7 bits (86), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+I Y  YY+TPRL+L GY
Sbjct: 178 RTYTLYIMYSPYYRTPRLYLSGY 200


>gi|385303438|gb|EIF47511.1| putative e2-like lipid conjugating enzyme atg3 [Dekkera
           bruxellensis AWRI1499]
          Length = 399

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 11/111 (9%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYL 320
           ++     + EYLTPV  ZS F ETG ++PEEFV AGD+LV+  PTW+W+    SK + +L
Sbjct: 6   IRSKFSSLREYLTPVNHZSNFTETGEISPEEFVKAGDYLVYKFPTWKWSPSPASKRRDFL 65

Query: 321 PPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQD-------EEGWVDTH 364
           P +KQFLIT++VP   R    DY  EK +  +N +D       EEGW   H
Sbjct: 66  PEDKQFLITRHVPSYVRA--TDY--EKGETSDNGEDYIDPFSPEEGWTSPH 112



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ GV    PL+  QM+ED++ DY  KTVT+E  P L      SIHPCRH+ VM+ +
Sbjct: 240 VGFDSNGV----PLSPQQMFEDIASDYRHKTVTIEKAPFLENTTAVSIHPCRHSTVMRAL 295

Query: 61  IETVLEGGGELGVHMY 76
           ++       E    MY
Sbjct: 296 MKMASAAAKENVNGMY 311



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QM+ED++ DY  KTVT+E  P L      SIHPCR
Sbjct: 253 QMFEDIASDYRHKTVTIEKAPFLENTTAVSIHPCR 287


>gi|322696809|gb|EFY88596.1| autophagocytosis protein [Metarhizium acridum CQMa 102]
          Length = 387

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD-ESKA 316
           +N ++ T   + +  TPV   S FR+TG VTPEEF+AAGD+LV+  PTW W   D E + 
Sbjct: 1   MNYIRSTVNTLRDRYTPVSHNSTFRQTGQVTPEEFIAAGDYLVYKFPTWSWGDADSEDRR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
            SYLP  KQ+L+T+NVPC RR 
Sbjct: 61  VSYLPAGKQYLVTRNVPCHRRL 82



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 71/196 (36%), Gaps = 73/196 (37%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETV------- 64
           PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VMK +++         
Sbjct: 205 PLPPQSMMDDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLDRADAALRIR 264

Query: 65  ---LEGGGELG---------------------------------------------VHMY 76
              L  G  +G                                             V  Y
Sbjct: 265 RDKLRSGKAVGSDPGMEGLVDEVAKLDVKSAQEAADKDEWEEVEGVDADEHEVAIRVDQY 324

Query: 77  LIIFLKFVQSVIPTIEYDFTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPC 136
           L++FLKF+ SV P IE+DFT                   TV+M+  P      + S+ P 
Sbjct: 325 LVVFLKFMASVTPGIEHDFTMGVIF-------------GTVSMKLGPWDANVQILSVPPR 371

Query: 137 RAIKSKASNQTQSCNK 152
           +   + A N    CN+
Sbjct: 372 KVTVALAEN----CNR 383



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+I Y  YY+TPRL+L GY
Sbjct: 177 RTYTLYIMYSPYYRTPRLYLSGY 199


>gi|166990601|sp|A7KAI2.1|ATG3_PICAN RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|129714811|gb|ABO31287.1| Atg3p [Ogataea angusta]
          Length = 339

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYL 320
           ++ T   + EYLTP+  +S F +TG +TPEEFVAAGD+LV+  PTWQW+   ESK + +L
Sbjct: 6   LRSTFSSLREYLTPISHKSTFTDTGEITPEEFVAAGDYLVYKFPTWQWSPAPESKKRDFL 65

Query: 321 PPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTH 364
           P +KQFL+T++VP   R    DY E  +K  E  ++E+GW  T+
Sbjct: 66  PNDKQFLVTRHVPSYVRAA--DY-EHTEKEAEMMEEEDGWTSTN 106



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 43/137 (31%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N+ GV    PL+ ++M+ED++ DY +KTVT+E  P L      SIHPCRHA VM+ +
Sbjct: 205 VGFNSNGV----PLSPNEMFEDIASDYRQKTVTIEKAPFLSNTTSVSIHPCRHANVMRVL 260

Query: 61  IET--------------VLEGGGELG-------------------------VHMYLIIFL 81
           ++               ++ G  +LG                         V  YL+IFL
Sbjct: 261 MKRAAHAAQAKKIRDKDLVTGVAKLGLADGKNADEEDDWENVEQGEEGIIRVDQYLVIFL 320

Query: 82  KFVQSVIPTIEYDFTQN 98
           KF+ SV P IEYD+T +
Sbjct: 321 KFIASVTPGIEYDYTMD 337



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++M+ED++ DY +KTVT+E  P L      SIHPCR
Sbjct: 217 NEMFEDIASDYRQKTVTIEKAPFLSNTTSVSIHPCR 252


>gi|320582834|gb|EFW97051.1| Autophagy-related E2-like conjugation enzyme ATG3 [Ogataea
           parapolymorpha DL-1]
          Length = 339

 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYL 320
           ++ T   + EYLTP+  +S F +TG +TPEEFVAAGD+LV+  PTWQW+   ESK + +L
Sbjct: 6   LRSTFSSLREYLTPISHKSTFTDTGEITPEEFVAAGDYLVYKFPTWQWSPAPESKKRDFL 65

Query: 321 PPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTH 364
           P +KQFL+T++VP   R    DY E  +K  E  ++E+GW  T+
Sbjct: 66  PNDKQFLVTRHVPSYVRAA--DY-EHTEKEAEMMEEEDGWTSTN 106



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 43/137 (31%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N+ GV    PL+ ++M+ED++ DY +KTVT+E  P L      SIHPCRHA VM+ +
Sbjct: 205 VGFNSNGV----PLSPNEMFEDIASDYRQKTVTIEKAPFLSNTTSVSIHPCRHANVMRVL 260

Query: 61  I--------------ETVLEGGGELG-------------------------VHMYLIIFL 81
           +              + ++ G  +LG                         V  YL+IFL
Sbjct: 261 MKRAAHAAQAKKIRDQDLVTGVAKLGLADGKNADEEDDWENVEQGEEGIIRVDQYLVIFL 320

Query: 82  KFVQSVIPTIEYDFTQN 98
           KF+ SV P IEYD+T +
Sbjct: 321 KFIASVTPGIEYDYTMD 337



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 25/36 (69%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++M+ED++ DY +KTVT+E  P L      SIHPCR
Sbjct: 217 NEMFEDIASDYRQKTVTIEKAPFLSNTTSVSIHPCR 252


>gi|340975602|gb|EGS22717.1| putative autophagy protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 339

 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 7/112 (6%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N +  T   + +  TP    S FR+TG +TPEEF+AAGD+LV+  P+W WA  +  SK 
Sbjct: 1   MNIIYSTVNSLRDRYTPASHTSTFRKTGEITPEEFLAAGDYLVYKFPSWSWADAETPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ--DEEGWVDT 363
            SYLPP KQ+L+T++VPC RR  + D+  +   ++ ++E  +  D++GW+ T
Sbjct: 61  VSYLPPGKQYLVTRHVPCHRRLNE-DFAGDAGHEEAVVEGGKNADDDGWLRT 111



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M +D+  DY  KTVT+E  P       MASIHPCRHA VMK +++
Sbjct: 200 PLPPHLMMDDIVGDYKDKTVTLEDFPFFANSVKMASIHPCRHASVMKTLLD 250



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 13/86 (15%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR---AIKS---------KASNQTQSC 150
           M +D+  DY  KTVT+E  P       MASIHPCR    +K+         K   + Q  
Sbjct: 206 MMDDIVGDYKDKTVTLEDFPFFANSVKMASIHPCRHASVMKTLLDRADAALKLRRERQKA 265

Query: 151 NKPNSTEEEDDDDEEALDMEDFEESG 176
             P+ + +  ++  E+LD+ + + +G
Sbjct: 266 GLPSDSAQGLENQIESLDISNRDAAG 291


>gi|358393579|gb|EHK42980.1| hypothetical protein TRIATDRAFT_300968 [Trichoderma atroviride IMI
           206040]
          Length = 346

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 20/125 (16%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +N+++       +  TPV   S FR TG +TPEEFVAAGD+LV+  PTW W+ 
Sbjct: 1   MNYLYSTVNTLR-------DRYTPVTHTSTFRNTGQITPEEFVAAGDYLVYRFPTWSWSD 53

Query: 311 GD-ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIEN--------EQDEE 358
            D E+   SYLP  KQFL+T+NVPC RR    D+  +   ++ ++ +        + D++
Sbjct: 54  ADSEALRVSYLPAGKQFLVTRNVPCHRRLND-DFAGDAGHEESVVNDGDDFKSKGDVDDD 112

Query: 359 GWVDT 363
           GW+ T
Sbjct: 113 GWLRT 117



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 57/141 (40%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPG-PPMASIHPCRHAEVMKKIIETV------- 64
           PL   +M ED+  DY  KTVT+E  P       MAS+HPC+HA VMK +++         
Sbjct: 203 PLPPMKMMEDIVGDYKDKTVTLEEFPFFANHVRMASVHPCKHAPVMKSLLDRADAALRLR 262

Query: 65  ----------------LEG-GGELG--------------------------------VHM 75
                           +EG   ELG                                V  
Sbjct: 263 REKLRASKKQSVDGKDVEGLTSELGNLDVKGAQDAADKDEWEEVQENEVDDQEVAIRVDQ 322

Query: 76  YLIIFLKFVQSVIPTIEYDFT 96
           YL++FLKF+ SV P IE+DFT
Sbjct: 323 YLVVFLKFMASVTPGIEHDFT 343



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 204 ECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           E G+  R RTY+L+I Y  YY+TPRL+L GY
Sbjct: 168 EPGNTAR-RTYNLYIMYTPYYRTPRLYLSGY 197


>gi|223590236|sp|A5DN42.3|ATG3_PICGU RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
          Length = 293

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 2/117 (1%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           + EYLTP+   S +  +G ++PEEFV AGD+LV+  PTWQW S  +   K +LPP+KQFL
Sbjct: 9   LREYLTPINHNSNYETSGEISPEEFVQAGDYLVYKFPTWQWGSAPKKLQKDFLPPDKQFL 68

Query: 328 ITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYD-ETTGKDIAIEDKISEI 383
           ITK+VP  +R +       +    + E+ ++GWV +H    E   +DIA + K+ +I
Sbjct: 69  ITKHVPSYQRAQSY-LGNTEDLAEDEEELDDGWVKSHRLTHEDPKRDIATDKKVPDI 124



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 30/124 (24%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N+ G+    PL   QM+ED+S DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 172 VGFNDNGI----PLLPHQMFEDISGDYRDKTATIENLPVSFNTTSVSIHPCKHSSVMKVL 227

Query: 61  ------------------------IETVLEGGGELGVHM--YLIIFLKFVQSVIPTIEYD 94
                                   +E   E   + G+ +  YL++FLKF+ SV P I YD
Sbjct: 228 MKHAKTSREKAREFEPEAFVTGENLEPATETTQDTGIRVDQYLVVFLKFIASVTPGIGYD 287

Query: 95  FTQN 98
           +T +
Sbjct: 288 YTMD 291


>gi|443923384|gb|ELU42636.1| autophagocytosis associated domain-containing protein [Rhizoctonia
           solani AG-1 IA]
          Length = 787

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 22/112 (19%)

Query: 275 VLKESKFRETGVVTP----------------EEFVAAGDHLVHHCPTWQWASGDESKAKS 318
           VLKESKF+E G +TP                EEFVAAGD L +  P W W  GD SKA+ 
Sbjct: 463 VLKESKFKEHGRITPGTHAPVAHRGWANSIIEEFVAAGDFLTYKFPVWSWEKGDASKARD 522

Query: 319 YLPPNKQFLITKNVPCPRRCKQIDYC---EEKQKIIENEQDE---EGWVDTH 364
           YLP +KQ+L+T+ VPC RR   + Y    E+ +K++   +D    + WV TH
Sbjct: 523 YLPADKQYLVTRKVPCLRRATSLAYTDADEDAEKLLSFAEDSGKGDEWVQTH 574



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 54/151 (35%)

Query: 3   ANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIE 62
           A    +++  PLT  Q+++DVS D+A KTVT+ES PH+     AS+HPC+HA+VMKK+IE
Sbjct: 637 AKGNLLQNGTPLTPPQVFQDVSADHAFKTVTIESFPHISSLSAASVHPCKHADVMKKVIE 696

Query: 63  TVLEG----------------GGE---LG------------------------------- 72
            +  G                GG+   LG                               
Sbjct: 697 RMNAGVVEEQKKRQGTTSSSKGGKRKWLGLRKGSSATPAPEEPKKGSTLGPGGEEGAEEA 756

Query: 73  ----VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
               V  YL++FLKF+ S++PTIE D T  F
Sbjct: 757 EGMRVDFYLVVFLKFIASIVPTIEVDSTTAF 787



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T  Q+++DVS D+A KTVT+ES PH+     AS+HPC+
Sbjct: 648 LTPPQVFQDVSADHAFKTVTIESFPHISSLSAASVHPCK 686


>gi|190348184|gb|EDK40595.2| hypothetical protein PGUG_04693 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 313

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 2/118 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            + EYLTP+   S +  +G ++PEEFV AGD+LV+  PTWQW S  +   K +LPP+KQF
Sbjct: 28  SLREYLTPINHNSNYETSGEISPEEFVQAGDYLVYKFPTWQWGSAPKKLQKDFLPPDKQF 87

Query: 327 LITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYD-ETTGKDIAIEDKISEI 383
           LITK+VP  +R +       +    + E+ ++GWV +H    E   +DIA + K+ +I
Sbjct: 88  LITKHVPSYQRAQSY-LGNTEDLAEDEEELDDGWVKSHRLTHEDPKRDIATDKKVPDI 144



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 30/124 (24%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N+ G+    PL   QM+ED+S DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 192 VGFNDNGI----PLLPHQMFEDISGDYRDKTATIENLPVSFNTTSVSIHPCKHSSVMKVL 247

Query: 61  ------------------------IETVLEGGGELGVHM--YLIIFLKFVQSVIPTIEYD 94
                                   +E   E   + G+ +  YL++FLKF+ SV P I YD
Sbjct: 248 MKHAKTSREKAREFEPEAFVTGENLEPATETTQDTGIRVDQYLVVFLKFIASVTPGIGYD 307

Query: 95  FTQN 98
           +T +
Sbjct: 308 YTMD 311


>gi|146413535|ref|XP_001482738.1| hypothetical protein PGUG_04693 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 313

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 2/118 (1%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            + EYLTP+   S +  +G ++PEEFV AGD+LV+  PTWQW S  +   K +LPP+KQF
Sbjct: 28  SLREYLTPINHNSNYETSGEISPEEFVQAGDYLVYKFPTWQWGSAPKKLQKDFLPPDKQF 87

Query: 327 LITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYD-ETTGKDIAIEDKISEI 383
           LITK+VP  +R +       +    + E+ ++GWV +H    E   +DIA + K+ +I
Sbjct: 88  LITKHVPSYQRAQSY-LGNTEDLAEDEEELDDGWVKSHRLTHEDPKRDIATDKKVPDI 144



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 30/124 (24%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N+ G+    PL   QM+ED+S DY  KT T+E+ P        SIHPC+H  VMK +
Sbjct: 192 VGFNDNGI----PLLPHQMFEDISGDYRDKTATIENLPVSFNTTSVSIHPCKHLSVMKVL 247

Query: 61  ------------------------IETVLEGGGELGVHM--YLIIFLKFVQSVIPTIEYD 94
                                   +E   E   + G+ +  YL++FLKF+ SV P I YD
Sbjct: 248 MKHAKTSREKAREFEPEAFVTGENLEPATETTQDTGIRVDQYLVVFLKFIASVTPGIGYD 307

Query: 95  FTQN 98
           +T +
Sbjct: 308 YTMD 311



 Score = 38.1 bits (87), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAI 139
           QM+ED+S DY  KT T+E+ P        SIHPC+ +
Sbjct: 205 QMFEDISGDYRDKTATIENLPVSFNTTSVSIHPCKHL 241


>gi|310794047|gb|EFQ29508.1| hypothetical protein GLRG_04652 [Glomerella graminicola M1.001]
          Length = 348

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 8/88 (9%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N + S +N+++       +  TPV  +S FR+TG +TPEEF+AAGD+LV+  PTW W   
Sbjct: 2   NLLYSTVNTLR-------DRYTPVSHKSTFRQTGQITPEEFIAAGDYLVYKFPTWSWGDA 54

Query: 312 D-ESKAKSYLPPNKQFLITKNVPCPRRC 338
           D +S+  S+LP  KQFL+T+NVPC RR 
Sbjct: 55  DSDSRRVSHLPAGKQFLVTRNVPCNRRL 82



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 57/152 (37%), Gaps = 63/152 (41%)

Query: 4   NNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           NNQ      PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 202 NNQ------PLPPHAMMDDIVGDYKDKTVTLEDFPFFANNIKMASVHPCKHASVMKTLLD 255

Query: 63  TV----------LEGGGELG---------------------------------------- 72
                       L  G  +G                                        
Sbjct: 256 RADAALRIRREKLRAGRAVGGDQGMEGLVDELGRLDVRDAQAAADKNDEWEEVEQSEVEE 315

Query: 73  ------VHMYLIIFLKFVQSVIPTIEYDFTQN 98
                 V  YL++FLKF+ SV P IE+DFT  
Sbjct: 316 QEVAIRVDQYLVVFLKFMASVTPGIEHDFTMG 347



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 201 DSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYN 235
           D+ + G     RTY L+I Y  YY+TPRL+L GY+
Sbjct: 166 DAGDSGKNSGRRTYTLYIMYSTYYRTPRLYLSGYS 200


>gi|384252499|gb|EIE25975.1| autophagocytosis protein, partial [Coccomyxa subellipsoidea C-169]
          Length = 301

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R PL  +Q+ EDVS+++A+KT+T++  P+  G   ASIHPC+HA VMKK+       G  
Sbjct: 212 RQPLKPNQVLEDVSEEHARKTITVDPFPNT-GVLAASIHPCKHASVMKKLASMAEASGKP 270

Query: 71  LGVHMYLIIFLKFVQSVIPTIEYDFT 96
             V  YL++FLKF+ SVIPTIEYD+T
Sbjct: 271 FQVDSYLVLFLKFIASVIPTIEYDYT 296



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 6/98 (6%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
            AE + PV  ES F+  GV+TP+EFV +GD+LV  C TW W +GD +K+K +LP +KQ+L
Sbjct: 14  AAERVLPVRSESGFKTHGVLTPDEFVRSGDYLVRTCSTWSWEAGDPAKSKDWLPKDKQYL 73

Query: 328 ITKNVPCPRRCKQID----YCEEKQKIIENEQDEEGWV 361
           +T+ VP  +R  +++      E    + + EQD  GWV
Sbjct: 74  VTRKVPSNKRASELEQYGMRAEANTMVEDAEQD--GWV 109



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 4/58 (6%)

Query: 190 PEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFKG-KENLVL 246
           P+  + +SP  D      I+RTRTYDL ITYDKYYQ PR WL GY+E+ +  K N VL
Sbjct: 167 PQAAAITSPGADQDH---IMRTRTYDLMITYDKYYQVPRFWLVGYDEKRQPLKPNQVL 221



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 3/59 (5%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR--AIKSKASNQTQSCNKP 153
           Q    +Q+ EDVS+++A+KT+T++  P+  G   ASIHPC+  ++  K ++  ++  KP
Sbjct: 213 QPLKPNQVLEDVSEEHARKTITVDPFPNT-GVLAASIHPCKHASVMKKLASMAEASGKP 270


>gi|224004462|ref|XP_002295882.1| autophagocytosis protein-like protein [Thalassiosira pseudonana
           CCMP1335]
 gi|209585914|gb|ACI64599.1| autophagocytosis protein-like protein [Thalassiosira pseudonana
           CCMP1335]
          Length = 313

 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 63/103 (61%), Gaps = 13/103 (12%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG 69
           S  PLT D+M +DV  DYA +TVT+E+HP++ G   ASIHPC+H  VMK I++ +   G 
Sbjct: 207 SSRPLTGDEMMQDVISDYAHRTVTIENHPNISGA-HASIHPCQHGAVMKTIVKNLTREGD 265

Query: 70  EL------------GVHMYLIIFLKFVQSVIPTIEYDFTQNFT 100
                          V MYL IFLKFV S+IPTI YDFT + +
Sbjct: 266 GGDGESGGEGSGGPSVEMYLFIFLKFVSSMIPTINYDFTMDVS 308



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 44/64 (68%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S F   GV+TPEEFV AGD LV+ CPTW W SGD +K K +LP +KQ+L T+ VPC  R 
Sbjct: 1   SAFLTRGVLTPEEFVKAGDELVYKCPTWTWESGDPAKRKKHLPADKQYLATRGVPCTARV 60

Query: 339 KQID 342
             ++
Sbjct: 61  SSLE 64



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 154 NSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRT 213
           N    +DD ++E  DM DFE+   L E + ++   P    + +    D+     I++ RT
Sbjct: 126 NQGGADDDQEDEYADMADFEDDNVL-EDEAAVVAAPVSTNATTKGENDNNH---ILKVRT 181

Query: 214 YDLHITYDKYYQTPRLWLYGY 234
           YDL ITYDKYYQTPR+WL GY
Sbjct: 182 YDLSITYDKYYQTPRVWLLGY 202



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 4/53 (7%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQTQ 148
            T D+M +DV  DYA +TVT+E+HP++ G   ASIHPC+    +K+   N T+
Sbjct: 211 LTGDEMMQDVISDYAHRTVTIENHPNISG-AHASIHPCQHGAVMKTIVKNLTR 262


>gi|294939232|ref|XP_002782367.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239893973|gb|EER14162.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 312

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 1/89 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL  ++++EDV  +Y  KTVT++ HP   G P ASIHPCRHAE+M ++I    E G ++ 
Sbjct: 225 PLAPEKIFEDVLTEYRSKTVTVDPHP-CTGIPCASIHPCRHAEMMLRVIRNWQEAGEKVQ 283

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
             + L++FLKF+  V+PTI YDFT + T+
Sbjct: 284 SELALLVFLKFISGVVPTINYDFTADVTM 312



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQ 325
           G     + V  ESKF   G +TPEEFVAAGD LV   PTWQWA +G  +  +S+LP  KQ
Sbjct: 21  GFVSRFSKVPTESKFAVKGTLTPEEFVAAGDALVTKFPTWQWAPAGKVAYEQSHLPKEKQ 80

Query: 326 FLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDT--HHYDETTGKDIAIEDKISEI 383
           +LITK VPC  R K ++    K   +   +DE+GW+ T   H     G+  A  +++++I
Sbjct: 81  YLITKGVPCFARVKDLENS-VKDVAVTTTEDEDGWLQTGESHPVYAVGRGNASREEVTDI 139

Query: 384 S 384
           +
Sbjct: 140 T 140



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 57/123 (46%), Gaps = 19/123 (15%)

Query: 118 TMESHP-HLPGPPMASIHPCRAIKSKASN-QTQSCNKPNSTEEEDDDDEEALDMEDFEES 175
           T ESHP +  G   AS      I   A   +T+S   P     ED DDEEA       +S
Sbjct: 117 TGESHPVYAVGRGNASREEVTDITDSAQQAKTESSKAPTMVVVEDYDDEEAHAAISALDS 176

Query: 176 GFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYN 235
             +  Q  +   +PP       P  D +        R+YDL IT+DKYYQTPRLWL  ++
Sbjct: 177 -LIAPQGATPVVVPP-------PDEDLR--------RSYDLSITWDKYYQTPRLWLSAFD 220

Query: 236 ERF 238
            RF
Sbjct: 221 -RF 222



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)

Query: 95  FTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           F Q    ++++EDV  +Y  KTVT++ HP   G P ASIHPCR
Sbjct: 222 FGQPLAPEKIFEDVLTEYRSKTVTVDPHP-CTGIPCASIHPCR 263


>gi|344234290|gb|EGV66160.1| hypothetical protein CANTEDRAFT_112618 [Candida tenuis ATCC 10573]
 gi|344234291|gb|EGV66161.1| hypothetical protein CANTEDRAFT_112618 [Candida tenuis ATCC 10573]
          Length = 307

 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 8/128 (6%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSY 319
           S++     + +YLTP+   S F  TG ++P+EFV AGD+LV+  PTW+W+S      KSY
Sbjct: 2   SIRSKLSSLRDYLTPINNTSNFTTTGEISPDEFVIAGDYLVYKFPTWEWSSAPSKLQKSY 61

Query: 320 LPPNKQFLITKNVPCPRRCKQ---IDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAI 376
           LPP+KQ+LITK+VP   R      ID   ++      E+ E+GWV +H   E+     +I
Sbjct: 62  LPPDKQYLITKHVPSHERAYTYLGIDATLDES----EEELEDGWVKSHKISESAKSSDSI 117

Query: 377 ED-KISEI 383
           +D K SEI
Sbjct: 118 DDAKPSEI 125



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 31/123 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QM+ED+S DY  +T T+E  P        SIHPC+HA VM+ +
Sbjct: 185 VGFSSSGI----PLLPKQMFEDISSDYRDRTATIEKLPTSFNTTSVSIHPCKHASVMRVL 240

Query: 61  IETVLEG-------------------------GGELGVH--MYLIIFLKFVQSVIPTIEY 93
           +E   +                            ELGV    YLIIFLKF+ SV P IEY
Sbjct: 241 MEHAKQSQLKRKLKDRDEDDESEDVKPKDEDEDDELGVRADQYLIIFLKFIASVTPGIEY 300

Query: 94  DFT 96
           D+T
Sbjct: 301 DYT 303


>gi|346320492|gb|EGX90092.1| autophagocytosis protein Aut1, putative [Cordyceps militaris CM01]
          Length = 353

 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 8/88 (9%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N + S +N+++       +  TPV   S FR+TG +TPEEFVAAGD+LV+  PTW W   
Sbjct: 2   NYIYSTVNTLR-------DRYTPVSHTSTFRQTGQITPEEFVAAGDYLVYKFPTWAWGDA 54

Query: 312 DE-SKAKSYLPPNKQFLITKNVPCPRRC 338
           D+ S+  +YLP  KQ+L+T+NVPC RR 
Sbjct: 55  DDASRRVAYLPEGKQYLVTRNVPCDRRL 82



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIE 62
           S  PL    M +D+  DY  KTVT+E  P       MAS+HPC+HA VMK +++
Sbjct: 201 SGQPLPPQDMMDDIVGDYKDKTVTLEDFPFFAHNIKMASVHPCKHASVMKTLLD 254



 Score = 38.1 bits (87), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 5/37 (13%)

Query: 199 AGD-SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           AGD +Q+ G     RTY L+I Y  YY+TPRL+L GY
Sbjct: 166 AGDGAQKSG----RRTYTLYIMYTPYYRTPRLYLSGY 198


>gi|110289572|gb|ABB47983.2| Autophagocytosis associated protein, N-terminal domain containing
           protein [Oryza sativa Japonica Group]
          Length = 312

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 51/76 (67%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
           G  E +T     S F E GV++  EF+ AGD+LV  CPTW W +GD SK K YLPP+KQF
Sbjct: 13  GTVERVTGPRTVSAFLEKGVLSVPEFILAGDNLVSKCPTWSWEAGDPSKRKPYLPPDKQF 72

Query: 327 LITKNVPCPRRCKQID 342
           L+T+NVPC RR   ++
Sbjct: 73  LVTRNVPCVRRAVSLE 88



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 13/92 (14%)

Query: 161 DDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITY 220
           +++E+  DM+ +E++G     + S+A   P       P  D     +I+RTRTYD+ ITY
Sbjct: 143 EEEEDIPDMDTYEDTG-----NDSVATAQPSYFVAEEPEDD-----NILRTRTYDVSITY 192

Query: 221 DKYYQTPRLWLYGYNE-RFKGKENLVL--ISK 249
           DKYYQTPR+WL GY+E R   K  LV   ISK
Sbjct: 193 DKYYQTPRVWLTGYDESRMPLKPELVFEDISK 224


>gi|134058000|emb|CAK47877.1| unnamed protein product [Aspergillus niger]
          Length = 328

 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 9/105 (8%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  P+W WA +   +K  SYLPP KQFL+T+
Sbjct: 15  LAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPSWSWADAATPAKRVSYLPPGKQFLVTR 74

Query: 331 NVPCPRRCK---QIDYCEEKQKII-----ENEQDEEGWVDTHHYD 367
            VPC RR       D   E + +      E + D++GW+ T   D
Sbjct: 75  GVPCHRRLNDNFAGDAGHEDEIVRGMLAGEGDNDDDGWLRTGGGD 119



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 55/121 (45%), Gaps = 35/121 (28%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIET-------- 63
           PL    M ED+  DY  KTVT+E  P   G   MA++HPCRHA VMK +++         
Sbjct: 207 PLPPQLMMEDIVGDYKDKTVTLEDFPWFEGSVKMATVHPCRHASVMKTLLDRADAALKIR 266

Query: 64  -----------------VLEGGGEL---------GVHMYLIIFLKFVQSVIPTIEYDFTQ 97
                            V  G G L          V  YL++FLKF+ SV P IE+DFT 
Sbjct: 267 RDKLKAAATAHAEPDAKVAAGAGGLEGLVDDVAIRVDQYLVVFLKFIASVTPGIEHDFTM 326

Query: 98  N 98
            
Sbjct: 327 G 327



 Score = 41.6 bits (96), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 16/24 (66%), Positives = 21/24 (87%)

Query: 211 TRTYDLHITYDKYYQTPRLWLYGY 234
           TRTY+L+ITY  +Y+TPRL+L GY
Sbjct: 178 TRTYNLYITYANFYRTPRLYLSGY 201



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MA++HPCR
Sbjct: 213 MMEDIVGDYKDKTVTLEDFPWFEGSVKMATVHPCR 247


>gi|119479681|ref|XP_001259869.1| autophagocytosis protein Aut1, putative [Neosartorya fischeri NRRL
           181]
 gi|166990599|sp|A1DF15.1|ATG3_NEOFI RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|119408023|gb|EAW17972.1| autophagocytosis protein Aut1, putative [Neosartorya fischeri NRRL
           181]
          Length = 353

 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 68/136 (50%), Gaps = 29/136 (21%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  PTW WA     +K  SYLPP KQFL+T+
Sbjct: 15  LAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPTWAWADASSPAKRVSYLPPGKQFLVTR 74

Query: 331 NVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISLDASTG 390
            VPC RR              EN   + G     H DE       + D +S    D   G
Sbjct: 75  GVPCHRRLN------------ENFAGDAG-----HEDEI------VRDMLSGADADDGDG 111

Query: 391 WVDTHHYDETTGKDIA 406
           W+ T       G+D+A
Sbjct: 112 WLRT-----GGGRDLA 122



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPWFDGGLKMASVHPCRHASVMKTLLD 256



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPWFDGGLKMASVHPCR 246



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 20/23 (86%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY+L+ITY  +Y+TPRL+L GY
Sbjct: 178 RTYNLYITYSNFYRTPRLYLSGY 200


>gi|358374704|dbj|GAA91294.1| autophagocytosis protein Aut1 [Aspergillus kawachii IFO 4308]
          Length = 361

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 9/105 (8%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  P+W WA +   +K  SYLPP KQFL+T+
Sbjct: 15  LAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPSWSWADAATPAKRVSYLPPGKQFLVTR 74

Query: 331 NVPCPRRCK---QIDYCEEKQKII-----ENEQDEEGWVDTHHYD 367
            VPC RR       D   E + +      E + D++GW+ T   D
Sbjct: 75  GVPCHRRLNDNFAGDAGHEDEIVRGMLAGEGDNDDDGWLRTGGGD 119



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MA++HPCRHA VMK +++
Sbjct: 207 PLPPQLMMEDIVGDYKDKTVTLEDFPWFEGSVKMATVHPCRHASVMKTLLD 257



 Score = 41.6 bits (96), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 16/24 (66%), Positives = 21/24 (87%)

Query: 211 TRTYDLHITYDKYYQTPRLWLYGY 234
           TRTY+L+ITY  +Y+TPRL+L GY
Sbjct: 178 TRTYNLYITYANFYRTPRLYLSGY 201



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MA++HPCR
Sbjct: 213 MMEDIVGDYKDKTVTLEDFPWFEGSVKMATVHPCR 247


>gi|317028241|ref|XP_001390319.2| autophagy-related protein 3 [Aspergillus niger CBS 513.88]
 gi|350632851|gb|EHA21218.1| hypothetical protein ASPNIDRAFT_54707 [Aspergillus niger ATCC 1015]
          Length = 359

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 9/105 (8%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  P+W WA +   +K  SYLPP KQFL+T+
Sbjct: 15  LAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPSWSWADAATPAKRVSYLPPGKQFLVTR 74

Query: 331 NVPCPRRCK---QIDYCEEKQKII-----ENEQDEEGWVDTHHYD 367
            VPC RR       D   E + +      E + D++GW+ T   D
Sbjct: 75  GVPCHRRLNDNFAGDAGHEDEIVRGMLAGEGDNDDDGWLRTGGGD 119



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MA++HPCRHA VMK +++
Sbjct: 207 PLPPQLMMEDIVGDYKDKTVTLEDFPWFEGSVKMATVHPCRHASVMKTLLD 257



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 16/24 (66%), Positives = 21/24 (87%)

Query: 211 TRTYDLHITYDKYYQTPRLWLYGY 234
           TRTY+L+ITY  +Y+TPRL+L GY
Sbjct: 178 TRTYNLYITYANFYRTPRLYLSGY 201



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MA++HPCR
Sbjct: 213 MMEDIVGDYKDKTVTLEDFPWFEGSVKMATVHPCR 247


>gi|312376630|gb|EFR23657.1| hypothetical protein AND_12480 [Anopheles darlingi]
          Length = 847

 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 44/46 (95%)

Query: 57  MKKIIETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVD 102
           MKKII+TV EGGGELGVHMYLIIFLKFVQ+VIPTIEYDFTQNF ++
Sbjct: 1   MKKIIQTVEEGGGELGVHMYLIIFLKFVQTVIPTIEYDFTQNFNIN 46


>gi|260951037|ref|XP_002619815.1| hypothetical protein CLUG_00974 [Clavispora lusitaniae ATCC 42720]
 gi|238847387|gb|EEQ36851.1| hypothetical protein CLUG_00974 [Clavispora lusitaniae ATCC 42720]
          Length = 299

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSY 319
           S++     + EYLTP+  ES FR+TG ++PEEFV AGD+LV+  PTW W +      K +
Sbjct: 2   SLRSKLSSLREYLTPINNESNFRKTGEISPEEFVKAGDYLVYKFPTWSWGTCPPQLQKKF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWV 361
           LPP KQFL+T++VP  +R      D  E   +  E++ D E W+
Sbjct: 62  LPPEKQFLVTRHVPSYQRVATAIPDSFENTDEEFEHDSDSE-WI 104



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 29/121 (23%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N  G+    PL   QMYED++ DY  KT T+E+ P        SIHPC+H+ VMK  
Sbjct: 179 VGFNANGI----PLLPQQMYEDIAGDYKDKTATIENLPMSYNTTSVSIHPCKHSSVMKVF 234

Query: 61  I--------ETVLEGGGELG-----------------VHMYLIIFLKFVQSVIPTIEYDF 95
           +        +T  +   +LG                 V  YL+IFLKF+ SV P IEYDF
Sbjct: 235 MKHAKAKAHKTQADLSSQLGSLELRDNSSEDIDEGIRVDQYLVIFLKFIASVTPGIEYDF 294

Query: 96  T 96
           T
Sbjct: 295 T 295



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QMYED++ DY  KT T+E+ P        SIHPC+
Sbjct: 192 QMYEDIAGDYKDKTATIENLPMSYNTTSVSIHPCK 226


>gi|121713242|ref|XP_001274232.1| autophagocytosis protein Aut1, putative [Aspergillus clavatus NRRL
           1]
 gi|166990596|sp|A1CAN8.1|ATG3_ASPCL RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
 gi|119402385|gb|EAW12806.1| autophagocytosis protein Aut1, putative [Aspergillus clavatus NRRL
           1]
          Length = 358

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 11/110 (10%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  P+W WA     +K  SYLPP KQFL+T+
Sbjct: 15  LAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPSWSWADASSPAKRVSYLPPGKQFLVTR 74

Query: 331 NVPCPRRCKQ-----IDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIA 375
            VPC RR  +       + +E  + +    D +GW+ T       G+D+A
Sbjct: 75  GVPCHRRLNENFAGDAGHEDEIVRDMLAGDDGDGWLRT-----GGGRDLA 119



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MA++HPCRHA VMK +++
Sbjct: 208 PLPPHLMMEDIVGDYKDKTVTLEDFPWFDGGVKMATVHPCRHASVMKTLLD 258



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           PAG S     I   RTY+L+ITY  +Y+TPRL+L GY
Sbjct: 169 PAGTSSTTQPI---RTYNLYITYSNFYRTPRLYLSGY 202



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MA++HPCR
Sbjct: 214 MMEDIVGDYKDKTVTLEDFPWFDGGVKMATVHPCR 248


>gi|254571613|ref|XP_002492916.1| E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole
           targeting (Cvt) pathway [Komagataella pastoris GS115]
 gi|238032714|emb|CAY70737.1| E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole
           targeting (Cvt) pathway [Komagataella pastoris GS115]
 gi|328353074|emb|CCA39472.1| Autophagy-related protein 3 [Komagataella pastoris CBS 7435]
          Length = 316

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 54/81 (66%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYL 320
           ++ T     EYLTPV  +S F ETG +TPEEFV AGD+LV+  PTWQW+S   +K + +L
Sbjct: 2   LRSTLSSWREYLTPVTHKSTFEETGEITPEEFVEAGDYLVYKFPTWQWSSAPPNKKRDFL 61

Query: 321 PPNKQFLITKNVPCPRRCKQI 341
           P +KQFL+T  VP   R  ++
Sbjct: 62  PDDKQFLVTHRVPSYARAAEL 82



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 33/123 (26%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII---------- 61
           +PL+ D+M+ED+S DY +KT T+E  P L      S+HPC+HA VM+ ++          
Sbjct: 194 SPLSPDRMFEDISPDYRQKTATIEKAPFLSNTTSVSVHPCKHANVMRVLMARATQRSIQN 253

Query: 62  -ETVLEGGGELG----------------------VHMYLIIFLKFVQSVIPTIEYDFTQN 98
             +V EG  +LG                      V  YLIIFLKF+ SV P IE+D+T +
Sbjct: 254 ASSVTEGVHKLGIADNNDEWEDVNTSDTTQQGIRVDQYLIIFLKFISSVTPGIEHDYTMD 313

Query: 99  FTV 101
            T 
Sbjct: 314 ATF 316



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           D+M+ED+S DY +KT T+E  P L      S+HPC+
Sbjct: 199 DRMFEDISPDYRQKTATIEKAPFLSNTTSVSVHPCK 234


>gi|320592561|gb|EFX04991.1| autophagocytosis protein [Grosmannia clavigera kw1407]
          Length = 362

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 8/93 (8%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N + S +N+++       +  TP    S FR+TG +TPEEFVAAGD+LV+  PTW WA  
Sbjct: 2   NLLYSTVNTLR-------DRYTPARHTSTFRKTGQITPEEFVAAGDYLVYKFPTWAWADA 54

Query: 312 D-ESKAKSYLPPNKQFLITKNVPCPRRCKQIDY 343
           +  S+  S+LPP KQ+L+T+NVPC  R   + Y
Sbjct: 55  EPASRRVSHLPPGKQYLVTRNVPCRHRLSDVAY 87



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIE 62
           PL    M +D+  DY  KTVT+E  P    G  MAS+HPC+HA VMK +++
Sbjct: 215 PLPPHLMMDDIVGDYQDKTVTLEDFPFFENGSKMASVHPCKHAPVMKTLLD 265


>gi|118353993|ref|XP_001010261.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Tetrahymena thermophila]
 gi|89292028|gb|EAR90016.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Tetrahymena thermophila SB210]
          Length = 280

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 2/99 (2%)

Query: 6   QGV-KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV 64
           QGV +   PL  +Q++ED+   Y+ KT+T E  P   G   AS+HPC+H++V+K +++ +
Sbjct: 183 QGVDEDNVPLKQNQVFEDIVSHYSNKTITFEVMPQ-TGIVQASLHPCKHSQVIKHMVDNI 241

Query: 65  LEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVDQ 103
            + GG +  H  L +FLKF+QSVIPTIEYD   +   D+
Sbjct: 242 NQSGGSIKSHQCLFVFLKFLQSVIPTIEYDVAGDIIFDE 280



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 10/135 (7%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           + +++ +N+VK   + V  Y  P   ES+F E G +TP+EFV +GD L++ CP W+W   
Sbjct: 5   DNIKNKLNNVKNDIISVV-YAPPT--ESRFFEEGKLTPQEFVTSGDALINMCPQWKWMPA 61

Query: 312 DESKAKS-YLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETT 370
              K K+ YLP  KQ+L+ + VPC +R +++        I  NE+++E     +   +  
Sbjct: 62  SAEKYKNKYLPAEKQYLLMEKVPCDQRVQEL-----MDSIAVNEKEDEEEYIINDQKKNN 116

Query: 371 GKDIAIEDKISEISL 385
            ++I IE KI ++S+
Sbjct: 117 DQNI-IETKIGQLSI 130


>gi|70998182|ref|XP_753819.1| autophagocytosis protein Aut1 [Aspergillus fumigatus Af293]
 gi|74673136|sp|Q4WUE5.1|ATG3_ASPFU RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
 gi|66851455|gb|EAL91781.1| autophagocytosis protein Aut1, putative [Aspergillus fumigatus
           Af293]
 gi|159126444|gb|EDP51560.1| autophagocytosis protein Aut1, putative [Aspergillus fumigatus
           A1163]
          Length = 353

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  PTW WA     +K  SYLPP KQFL+T+
Sbjct: 15  LAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPTWSWADASSPAKRVSYLPPGKQFLVTR 74

Query: 331 NVPCPRRCKQ 340
            VPC RR  +
Sbjct: 75  GVPCHRRLNE 84



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 58/147 (39%), Gaps = 61/147 (41%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKII---------- 61
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK ++          
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPWFDGGVKMASVHPCRHASVMKTLLDRADAALKIR 265

Query: 62  ------------------ETVLEG------------------GGE--------------L 71
                             E  LEG                  GG+              +
Sbjct: 266 RDKLKQAHSADQANRINSERGLEGLVDETRGLSLNEQQGHAAGGDEWEVLQHDEEDQVAI 325

Query: 72  GVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            V  YL++FLKF+ SV P IE+DFT  
Sbjct: 326 RVDQYLVVFLKFIASVTPGIEHDFTMG 352



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 16/24 (66%), Positives = 21/24 (87%)

Query: 211 TRTYDLHITYDKYYQTPRLWLYGY 234
           TRTY+L+ITY  +Y+TPRL+L GY
Sbjct: 177 TRTYNLYITYSNFYRTPRLYLSGY 200



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPWFDGGVKMASVHPCR 246


>gi|167396289|ref|XP_001741994.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165893190|gb|EDR21530.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 268

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 1/87 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT +QM+ED+S  +A +T T ++HP L    +  IHPCRHA+VMKK ++ ++  G    
Sbjct: 183 PLTENQMFEDLSATHAGQTATTDTHPFLDIKEI-YIHPCRHAQVMKKRVDEMIADGKTPR 241

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           V +YL+IFLKF+ +VIPT+EYD+ ++F
Sbjct: 242 VDLYLMIFLKFLATVIPTMEYDYGKDF 268



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 5/107 (4%)

Query: 256 SVINSVKGTALGV----AEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-AS 310
           SV++++K  A        + + P L ES+F E GV+TPEEFV AGD LV+   TWQW  +
Sbjct: 2   SVLSTLKRKAYETYTKSVDLVKPTLTESQFIEKGVLTPEEFVNAGDFLVNKYRTWQWVGA 61

Query: 311 GDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDE 357
            D  K   YLP +KQFLIT+N+ C  R +     + +  I++ E+ E
Sbjct: 62  SDCKKTVDYLPADKQFLITRNIRCATRAQGGPPTKTETLIVDGEEFE 108



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 196 SSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           S  A D+    D+ +TRTYD+ I Y  + +TP++WL GY+E  K
Sbjct: 139 SEEADDTVATVDVGKTRTYDISIIYSHFDRTPKVWLLGYDEDHK 182


>gi|367021866|ref|XP_003660218.1| hypothetical protein MYCTH_2298243 [Myceliophthora thermophila ATCC
           42464]
 gi|347007485|gb|AEO54973.1| hypothetical protein MYCTH_2298243 [Myceliophthora thermophila ATCC
           42464]
          Length = 344

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 14/119 (11%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +NS++       +  TP    S FR+TG +TPEEF+AAGD+LV   P+W WA 
Sbjct: 1   MNILYSTVNSLR-------DRYTPASHTSTFRKTGEITPEEFLAAGDYLVFKFPSWSWAD 53

Query: 311 GDE-SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIEN--EQDEEGWVDT 363
            +  SK  S+LPP KQ+L+T++VPC RR    D+  +   ++ ++E     D++GW+ T
Sbjct: 54  AETPSKRISHLPPGKQYLVTRHVPCHRRLND-DFAGDAGHEEAVVEGGKNNDDDGWLRT 111



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MASIHPC+HA VMK +++
Sbjct: 199 PLPPHLMMEDIVGDYKDKTVTLEDFPFFANSVKMASIHPCKHASVMKTLLD 249


>gi|345566482|gb|EGX49425.1| hypothetical protein AOL_s00078g458 [Arthrobotrys oligospora ATCC
           24927]
          Length = 346

 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 48/67 (71%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           +TP    S F  TG +TPEEFV+AGD+LV+  PTW W+S    KAK+YLP +KQFL+TK 
Sbjct: 16  ITPPTHTSTFLTTGKLTPEEFVSAGDYLVYKFPTWSWSSAAPGKAKTYLPSDKQFLVTKG 75

Query: 332 VPCPRRC 338
           VPC RR 
Sbjct: 76  VPCHRRL 82



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PLT  +M +D+  DY  KTVT+E  P L G   M S+HPC+HA VM+ +++
Sbjct: 201 PLTHAEMMQDIVGDYQDKTVTIEEFPFLEGNLKMPSVHPCKHASVMRLLLD 251



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 206 GDIVRT--RTYDLHITYDKYYQTPRLWLYG 233
           GD  +T  RTY L+ITY  YY TPRL+L G
Sbjct: 164 GDNTKTPLRTYTLYITYSTYYSTPRLYLTG 193


>gi|336264648|ref|XP_003347100.1| hypothetical protein SMAC_05399 [Sordaria macrospora k-hell]
 gi|380093795|emb|CCC08759.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 346

 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N ++ TA  + +  TPV   S FR TG +TPEEFVAAGD+L    P+W WA  D  SK 
Sbjct: 1   MNFLRSTAATLLDKYTPVSHTSTFRNTGQITPEEFVAAGDYLTFKFPSWSWADADSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQ 340
            ++LP  KQFL+T++VPC RR   
Sbjct: 61  LTFLPAGKQFLVTRHVPCHRRLNN 84



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MAS+HPCRHA VMK +++
Sbjct: 199 PLPPHLMMEDIVGDYKDKTVTLEDFPFFSHSVKMASVHPCRHASVMKTLLD 249


>gi|407043903|gb|EKE42228.1| autophagocytosis protein, putative [Entamoeba nuttalli P19]
          Length = 268

 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 62/87 (71%), Gaps = 1/87 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT  QM+ED+S  +A +T T ++HP L    +  IHPCRHA+VMKK ++ ++  G    
Sbjct: 183 PLTESQMFEDLSATHAGQTATTDTHPFLDIKEI-YIHPCRHAQVMKKRVDEMIADGKTPR 241

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           V +YL+IFLKF+ +VIPT+EYD+ ++F
Sbjct: 242 VDLYLMIFLKFLATVIPTMEYDYGKDF 268



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 5/107 (4%)

Query: 256 SVINSVKGTALGV----AEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-AS 310
           SV++++K  A        + + P L ES+F E GV+TPEEFV AGD LV+   TWQW  +
Sbjct: 2   SVLSTLKRKAYETYTKSVDLVKPTLTESQFIEKGVLTPEEFVNAGDFLVNKYRTWQWVGA 61

Query: 311 GDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDE 357
            D  K   YLP +KQFLIT+N+ C  R +     + +  I++ E+ E
Sbjct: 62  SDCKKTVDYLPADKQFLITRNIRCATRAQGGPPTKTETLIVDGEEFE 108



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 196 SSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           S  A D+    D+ +TRTYD+ I Y  + +TP++WL GY+E  K
Sbjct: 139 SEEADDTVATVDVGKTRTYDISIIYSHFDRTPKVWLLGYDEDHK 182


>gi|169778137|ref|XP_001823534.1| autophagy-related protein 3 [Aspergillus oryzae RIB40]
 gi|238495406|ref|XP_002378939.1| autophagocytosis protein Aut1, putative [Aspergillus flavus
           NRRL3357]
 gi|121800225|sp|Q2U7R4.1|ATG3_ASPOR RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
 gi|83772271|dbj|BAE62401.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220695589|gb|EED51932.1| autophagocytosis protein Aut1, putative [Aspergillus flavus
           NRRL3357]
 gi|391872328|gb|EIT81462.1| protein involved in autophagocytosis during starvation [Aspergillus
           oryzae 3.042]
          Length = 356

 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKA 316
           +N +  T     + L PV + S FR TG +TPEEFV AGD+LV+  P+W WA + + +K 
Sbjct: 1   MNILHSTLSTWRDRLAPVSRTSTFRNTGQITPEEFVLAGDYLVYKFPSWSWADASNPAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
            SYLPP KQFL+T+ VPC RR 
Sbjct: 61  VSYLPPGKQFLVTRGVPCHRRL 82



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M EDV  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 206 PLPPHLMMEDVVGDYKDKTVTLEDFPWYDGNVKMASVHPCRHASVMKTLLD 256



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 21/24 (87%)

Query: 211 TRTYDLHITYDKYYQTPRLWLYGY 234
           TRTY+L+ITY  +Y+TPRL++ GY
Sbjct: 177 TRTYNLYITYSNFYRTPRLYMSGY 200



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 22/95 (23%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR--------------AIKSKASNQTQ 148
           M EDV  DY  KTVT+E  P   G   MAS+HPCR              A+K +     Q
Sbjct: 212 MMEDVVGDYKDKTVTLEDFPWYDGNVKMASVHPCRHASVMKTLLDRADAALKLRREKLKQ 271

Query: 149 SCNKPN-------STEEEDDDDEEALDMEDFEESG 176
           + + P+       S  E   DD +AL + D ++ G
Sbjct: 272 AQSDPSKAPSVGESGLEGLVDDIKALSLSDQQQHG 306


>gi|67478642|ref|XP_654705.1| autophagocytosis protein [Entamoeba histolytica HM-1:IMSS]
 gi|56471771|gb|EAL49315.1| autophagocytosis protein, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|449708308|gb|EMD47793.1| autophagocytosis protein, putative [Entamoeba histolytica KU27]
          Length = 268

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 62/87 (71%), Gaps = 1/87 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PLT  QM+ED+S  +A +T T ++HP L    +  IHPCRHA+VMKK ++ ++  G    
Sbjct: 183 PLTESQMFEDLSATHAGQTATTDTHPFLDIKEI-YIHPCRHAQVMKKRVDEMIADGKTPR 241

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           V +YL+IFLKF+ +VIPT+EYD+ ++F
Sbjct: 242 VDLYLMIFLKFLATVIPTMEYDYGKDF 268



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 5/107 (4%)

Query: 256 SVINSVKGTALGV----AEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-AS 310
           SV++++K  A        + + P L ES+F E GV+TPEEFV AGD LV+   TWQW  +
Sbjct: 2   SVLSTLKRKAYETYTKSVDLVKPTLTESQFIEKGVLTPEEFVNAGDFLVNKYRTWQWVGA 61

Query: 311 GDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDE 357
            D  K   YLP +KQFLIT+N+ C  R +     + +  I++ E+ E
Sbjct: 62  SDCKKTVDYLPADKQFLITRNIRCATRAQGGPPTKTETLIVDGEEFE 108



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 196 SSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           S  A D+    D+ +TRTYD+ I Y  + +TP++WL GY+E  K
Sbjct: 139 SEEADDTVATVDVGKTRTYDISIIYSHFDRTPKVWLLGYDEDHK 182


>gi|367041932|ref|XP_003651346.1| hypothetical protein THITE_2111497 [Thielavia terrestris NRRL 8126]
 gi|346998608|gb|AEO65010.1| hypothetical protein THITE_2111497 [Thielavia terrestris NRRL 8126]
          Length = 341

 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 14/119 (11%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS 310
            N + S +NS++       +  TP    S FR TG +TPEEF+AAGD+LV   P+W WA 
Sbjct: 1   MNILYSTVNSLR-------DRYTPANHTSTFRSTGEITPEEFLAAGDYLVFKFPSWSWAD 53

Query: 311 GDE-SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ--DEEGWVDT 363
            +  SK  S+LPP KQ+L+T++VPC RR    D+  +   ++ ++E  +  D++GW+ T
Sbjct: 54  AETPSKRISHLPPGKQYLVTRHVPCHRRLND-DFAGDAGHEESVVEGGKNSDDDGWLRT 111



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 58/142 (40%), Gaps = 56/142 (39%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIET-------- 63
           PL    M ED+  DY  KTVT+E  P    P  MASIHPC+HA VMK +++         
Sbjct: 199 PLPPHLMMEDIVGDYKDKTVTLEDFPFFANPVKMASIHPCKHASVMKTLLDRADAALKLR 258

Query: 64  -------VLEGGG--------ELG--------------------------------VHMY 76
                  + EG G        E+G                                V  Y
Sbjct: 259 SEKRKAGLAEGSGQGLEGLEAEIGHLSVSGTGSSGDNNDEWEDVQHDVADQEPAIRVDQY 318

Query: 77  LIIFLKFVQSVIPTIEYDFTQN 98
           L++FLKF+ SV P IE+DFT  
Sbjct: 319 LVVFLKFIASVTPGIEHDFTMG 340



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P    P  MASIHPC+
Sbjct: 205 MMEDIVGDYKDKTVTLEDFPFFANPVKMASIHPCK 239


>gi|365758621|gb|EHN00455.1| Atg3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 310

 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA-KSY 319
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+L H  PTW+W  G    + + +
Sbjct: 2   IRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKWNEGSSDVSYRDF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQ 340
           LP NKQFL+ + VPC +R +Q
Sbjct: 62  LPKNKQFLVIRKVPCDKRAEQ 82



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 32/124 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G N  G    +PLT +QM+ED+S DY  KT T+E  P      ++ SIHPC+HA VMK 
Sbjct: 187 VGFNADG----SPLTPEQMFEDISPDYRTKTATIEKLPFYKNSILSVSIHPCKHANVMKI 242

Query: 60  II----------------ETVLEGGGE-----------LGVHMYLIIFLKFVQSVIPTIE 92
           ++                E  ++G G+           L V  YLI+FLKF+ SV P+I+
Sbjct: 243 LLDKVRVVRQRRRKEQQEEQEIDGAGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTPSIQ 302

Query: 93  YDFT 96
           +D+T
Sbjct: 303 HDYT 306



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCR 137
            T +QM+ED+S DY  KT T+E  P      ++ SIHPC+
Sbjct: 196 LTPEQMFEDISPDYRTKTATIEKLPFYKNSILSVSIHPCK 235


>gi|242793117|ref|XP_002482097.1| autophagocytosis protein Aut1, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218718685|gb|EED18105.1| autophagocytosis protein Aut1, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 379

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 1/70 (1%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK-SYLPPNKQFLI 328
           +++TPV   S FRETG +TPEEFVAAGD+LV   P+WQWA       +  +LPP KQ+L+
Sbjct: 15  DWITPVTHTSTFRETGKITPEEFVAAGDYLVFKFPSWQWADASTPAQRVPFLPPGKQYLV 74

Query: 329 TKNVPCPRRC 338
           T+ VPC RR 
Sbjct: 75  TRGVPCHRRL 84



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P      PMA++HPC+HA VMK +++
Sbjct: 213 PLPPHLMMEDIVGDYKDKTVTLEDFPWFDTSVPMATVHPCQHASVMKILLD 263



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           P+G S   G     RTY+L+ITY  YY+TPRL+L GY
Sbjct: 174 PSGAS---GTTAPLRTYNLYITYANYYRTPRLYLSGY 207


>gi|406607635|emb|CCH41106.1| Autophagy-related protein [Wickerhamomyces ciferrii]
          Length = 321

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLIT 329
           EYLTP    S F++TG +TPEEFVAAGD+L +  PTWQW+    SK + +LP +KQFL+T
Sbjct: 11  EYLTPAYHTSTFKQTGEITPEEFVAAGDYLTYKFPTWQWSPAPASKKRDFLPDDKQFLVT 70

Query: 330 KNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDT 363
           + VP   R  +  Y    + + E E DE+GW  T
Sbjct: 71  RRVPSYVRAAE--YLGVNETLEEEEVDEDGWTKT 102



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 51/145 (35%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G     PLT DQM+ED++ DY  KTVT+E  P L      SIHPCRHA VMK +
Sbjct: 179 IGYDSNGT----PLTPDQMFEDITADYRSKTVTIEKAPFLDDTTTVSIHPCRHAAVMKVL 234

Query: 61  I----------------------ETVLEGGGELG-------------------------V 73
           I                      + +++G G+LG                         V
Sbjct: 235 IGRAVQAAKRNKSQEKEKESSSEQDLVKGVGKLGLADSKDEEEWEQLDEDDVQEEDIVRV 294

Query: 74  HMYLIIFLKFVQSVIPTIEYDFTQN 98
             YLIIFLKF+ SV P IE+D+T +
Sbjct: 295 DQYLIIFLKFITSVTPGIEHDYTMD 319



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 25/101 (24%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPC-----------RAIKSKASNQT 147
            T DQM+ED++ DY  KTVT+E  P L      SIHPC           RA+++   N++
Sbjct: 188 LTPDQMFEDITADYRSKTVTIEKAPFLDDTTTVSIHPCRHAAVMKVLIGRAVQAAKRNKS 247

Query: 148 QSCNKPNSTEEE--------------DDDDEEALDMEDFEE 174
           Q   K +S+E++              D+++ E LD +D +E
Sbjct: 248 QEKEKESSSEQDLVKGVGKLGLADSKDEEEWEQLDEDDVQE 288


>gi|412993230|emb|CCO16763.1| predicted protein [Bathycoccus prasinos]
          Length = 339

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 18/105 (17%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           R  L    +YED+S D+AKKTVT++ HPH      AS+HPC+HA VMKK+++ +      
Sbjct: 235 RNSLPPKLVYEDISADHAKKTVTIDPHPHT-NVSSASVHPCKHASVMKKLVKMMTTSAAG 293

Query: 71  L-----------------GVHMYLIIFLKFVQSVIPTIEYDFTQN 98
                              V  YLI+FLKF+QS +PTIEYDFT N
Sbjct: 294 GGGDGEEEEEEEEEEEKPSVERYLIVFLKFMQSAMPTIEYDFTTN 338



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 8/111 (7%)

Query: 256 SVINSVKGTALGVAEYLTPV-LKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW--ASGD 312
           S+ +SV        E +T V    S+F E G +TPE+FV AGD+LV  CPTWQW  +S  
Sbjct: 8   SIRHSVHTVVKSAVESITSVPTGSSQFLENGTLTPEDFVKAGDYLVETCPTWQWKKSSAR 67

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQI-DYCEEKQKIIENEQDEEGWVD 362
           E++ K YLP  KQ+L T+NVPC +R K + +YC    K +    ++EGWV+
Sbjct: 68  ETR-KKYLPEEKQYLATRNVPCRKRAKAMEEYC---GKEVALSGEDEGWVE 114



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 16/70 (22%)

Query: 168 DMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           DMED +E       D +I    P+K+         +   D++RTRTYD+ IT+DKYYQTP
Sbjct: 181 DMEDVDE-------DDAILIAAPKKE---------KNNEDLLRTRTYDVSITWDKYYQTP 224

Query: 228 RLWLYGYNER 237
           R+WL GY+E+
Sbjct: 225 RVWLNGYDEQ 234



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           +YED+S D+AKKTVT++ HPH      AS+HPC+
Sbjct: 243 VYEDISADHAKKTVTIDPHPHT-NVSSASVHPCK 275


>gi|70952696|ref|XP_745499.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56525840|emb|CAH77844.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 100

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 51/87 (58%)

Query: 256 SVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESK 315
           +VI  +  T   V  Y  P+   S F + G +TP EFV AGD L H   TW+W   DES+
Sbjct: 6   NVIYKIGDTYRKVYSYFKPITNSSTFTKHGTLTPAEFVDAGDFLTHKFKTWEWREADESR 65

Query: 316 AKSYLPPNKQFLITKNVPCPRRCKQID 342
           A  YLP  KQFLI++NVPC  R K ++
Sbjct: 66  AVPYLPEKKQFLISRNVPCKHRIKDLN 92


>gi|401837476|gb|EJT41400.1| ATG3-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 189

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA-KSY 319
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+L H  PTW+W  G    + + +
Sbjct: 2   IRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKWNEGSSDVSYRDF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQ 340
           LP NKQFL+ + VPC +R +Q
Sbjct: 62  LPKNKQFLVIRKVPCDKRAEQ 82


>gi|212535462|ref|XP_002147887.1| autophagocytosis protein Aut1, putative [Talaromyces marneffei ATCC
           18224]
 gi|210070286|gb|EEA24376.1| autophagocytosis protein Aut1, putative [Talaromyces marneffei ATCC
           18224]
          Length = 378

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 1/70 (1%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK-SYLPPNKQFLI 328
           +++TPV   S FRETG +TPEEFVAAGD+LV   P+WQWA       +  +LPP KQ+L+
Sbjct: 15  DWITPVTHTSTFRETGKITPEEFVAAGDYLVFKFPSWQWADASTPAQRVPFLPPGKQYLV 74

Query: 329 TKNVPCPRRC 338
           T+ VPC RR 
Sbjct: 75  TRGVPCHRRL 84



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P      PMA++HPC+HA VMK +++
Sbjct: 215 PLPPHLMMEDIVGDYKDKTVTLEDFPWFDTNVPMATVHPCQHASVMKILLD 265



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           S + G     RTY+L+ITY  YY+TPRL+L GY
Sbjct: 177 SGQSGTTAPLRTYNLYITYANYYRTPRLYLSGY 209


>gi|156040728|ref|XP_001587350.1| hypothetical protein SS1G_11342 [Sclerotinia sclerotiorum 1980]
 gi|166990608|sp|A7F172.1|ATG3_SCLS1 RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
 gi|154695726|gb|EDN95464.1| hypothetical protein SS1G_11342 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 362

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 67/131 (51%), Gaps = 19/131 (14%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD-ESKAKSYLPPNKQFLITK 330
            TPV   S FR  G +TPEEFVAAGD+LV   PTW WA     SK  SYLP  KQFL+T+
Sbjct: 14  FTPVSNTSTFRTNGQITPEEFVAAGDYLVFKFPTWSWADASPTSKRASYLPAGKQFLVTR 73

Query: 331 NVPCPRRCKQIDYCEEK---QKIIENEQ-----------DEEGWVDTHHY---DETTGKD 373
            VPC RR    D+  E    + ++ + +           DE+GW+ T       E   +D
Sbjct: 74  GVPCHRRLDD-DFAGEAGHDETVVGDGEDFRGTGHSPGDDEDGWLRTGGLAASQEARARD 132

Query: 374 IAIEDKISEIS 384
           +   D+  E+ 
Sbjct: 133 VRTVDESGEMG 143



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 8   VKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           + S  PL    M ED+  DY  KTVT+E  P+      MASIHPC+HA VMK +++
Sbjct: 202 LSSSQPLPPHLMMEDIVGDYKDKTVTLEDFPYFSNNIKMASIHPCKHASVMKTLLD 257



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 20/93 (21%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR--------------AIKSKASNQTQ 148
           M ED+  DY  KTVT+E  P+      MASIHPC+              A+K +   Q Q
Sbjct: 213 MMEDIVGDYKDKTVTLEDFPYFSNNIKMASIHPCKHASVMKTLLDRADAALKLRREKQKQ 272

Query: 149 SCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQ 181
               P +     D   E L ++DFE++   D++
Sbjct: 273 GKTVPGAK----DTGMEGL-VDDFEKTKISDKK 300


>gi|296809101|ref|XP_002844889.1| Atg3p [Arthroderma otae CBS 113480]
 gi|238844372|gb|EEQ34034.1| Atg3p [Arthroderma otae CBS 113480]
          Length = 361

 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-ASGDESKA 316
           +N ++     + + L P+   S FR TG VTPEEFV AGD+LV+  PTW W A+   SK 
Sbjct: 1   MNVIRSKLNDIRDRLAPISHVSTFRNTGQVTPEEFVLAGDYLVYKFPTWSWSAAASPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQ 340
            SYLP  KQFL+T+ VPC RR  +
Sbjct: 61  VSYLPEGKQFLVTRGVPCNRRLDE 84



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPFFEGGVKMASVHPCKHASVMKVLLD 256



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 178 RTYSLYITYTPYYKTPRLYLSGY 200



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPC+
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPFFEGGVKMASVHPCK 246


>gi|221054378|ref|XP_002258328.1| autophagocytosis associated protein [Plasmodium knowlesi strain H]
 gi|193808397|emb|CAQ39100.1| autophagocytosis associated protein, putative [Plasmodium knowlesi
           strain H]
          Length = 318

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 256 SVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESK 315
           +V + +  T   V  Y  P+   S F + G +TP EFV AGD LV+   TW+W   D+++
Sbjct: 6   NVKHKIGDTYRKVYSYFKPITYSSSFIKNGTLTPAEFVDAGDFLVYKFRTWEWQDADKNR 65

Query: 316 AKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDI 374
              YLP  KQFL+TKNV C +R K + Y     K +EN+     W+   + +E    DI
Sbjct: 66  RVPYLPEGKQFLLTKNVACKQRIKDLSYIMRDVKTVEND-----WLLPSYEEENNATDI 119



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL  ++++ED+S +Y+ +TVT + HP   G   ASIHPCRHAE M  I++  +  G E  
Sbjct: 225 PLKSEEIFEDISAEYSYETVTYDPHP-CTGVMTASIHPCRHAEAMLSIVKNWMSEGKEPR 283

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQN 98
             +YL+  LKFV  VIPTIEYDFT +
Sbjct: 284 HDLYLLFLLKFVSGVIPTIEYDFTTD 309



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 8/101 (7%)

Query: 139 IKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSP 198
           +K+  ++  +    PN  ++  ++D+EA+D+ +F+        DP+I  I  +  +    
Sbjct: 126 MKTPTTSVRRQEKAPNQDDDSMEEDDEAIDIHNFDAHF-----DPNIDLIKEDDPAALDH 180

Query: 199 AGDSQECG---DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
            G    CG   +I++ RTYD+ ITYDKYY+TPR+WL+GY+E
Sbjct: 181 GGLYSYCGQNENIMKIRTYDVSITYDKYYETPRIWLFGYDE 221



 Score = 38.1 bits (87), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIKSKAS 144
           ++++ED+S +Y+ +TVT + HP   G   ASIHPCR  ++  S
Sbjct: 229 EEIFEDISAEYSYETVTYDPHP-CTGVMTASIHPCRHAEAMLS 270


>gi|154425462|dbj|BAF74779.1| autophagy-related gene 3 product [Entamoeba invadens]
          Length = 266

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 63/87 (72%), Gaps = 1/87 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL+  QM+ED+S  +A +T T ++HP L    +  IHPCRHA+VMKK ++ +++ G    
Sbjct: 181 PLSETQMFEDLSATHAGQTATTDTHPFLEIKEIY-IHPCRHAQVMKKRVDEMVKEGKNPR 239

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           V +YL+IFLKF+ +VIPT+EYD+ ++F
Sbjct: 240 VDLYLMIFLKFLTTVIPTMEYDYGRDF 266



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 269 AEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-ASGDESKAKSYLPPNKQFL 327
            + L P L ES+F E GV+TPEEFV AGD LV    TWQW  S D  K   YLP NKQFL
Sbjct: 17  VDLLKPTLTESQFIEKGVLTPEEFVRAGDFLVDKYRTWQWVGSADCKKTVDYLPANKQFL 76

Query: 328 ITKNVPCPRRCK 339
           IT+++ C  R +
Sbjct: 77  ITRDIRCAIRAQ 88



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 22/30 (73%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           +I  TRTYD+ I Y  + +TP++WL GY+E
Sbjct: 148 EIKTTRTYDISIIYSHFDRTPKVWLLGYDE 177


>gi|440298451|gb|ELP91087.1| hypothetical protein EIN_268330 [Entamoeba invadens IP1]
          Length = 268

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 63/87 (72%), Gaps = 1/87 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL+  QM+ED+S  +A +T T ++HP L    +  IHPCRHA+VMKK ++ +++ G    
Sbjct: 183 PLSETQMFEDLSATHAGQTATTDTHPFLEIKEIY-IHPCRHAQVMKKRVDEMVKEGKNPR 241

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           V +YL+IFLKF+ +VIPT+EYD+ ++F
Sbjct: 242 VDLYLMIFLKFLTTVIPTMEYDYGRDF 268



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 269 AEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-ASGDESKAKSYLPPNKQFL 327
            + L P L ES+F E GV+TPEEFV AGD LV    TWQW  S D  K   YLP NKQFL
Sbjct: 19  VDLLKPTLTESQFIEKGVLTPEEFVRAGDFLVDKYRTWQWVGSADCKKTVDYLPANKQFL 78

Query: 328 ITKNVPCPRRCK 339
           IT+++ C  R +
Sbjct: 79  ITRDIRCAIRAQ 90



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 22/30 (73%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           +I  TRTYD+ I Y  + +TP++WL GY+E
Sbjct: 150 EIKTTRTYDISIIYSHFDRTPKVWLLGYDE 179


>gi|123505459|ref|XP_001328979.1| autophagocytosis associated protein [Trichomonas vaginalis G3]
 gi|121911929|gb|EAY16756.1| autophagocytosis associated protein, putative [Trichomonas
           vaginalis G3]
          Length = 258

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 6/91 (6%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII 61
           G NN+GV    PLT++QMY+D+S DYA KTVT E+HP        SIHPC+H  VM +++
Sbjct: 164 GVNNEGV----PLTLEQMYQDISADYADKTVTYENHP-FTATKNLSIHPCQHGHVMVRLV 218

Query: 62  ETVLEGGGELGVHMYLIIFLKFVQSVIPTIE 92
           E  L+   +    MY  IFLKF+ +VIPTI+
Sbjct: 219 ER-LDHPEKFCAPMYYFIFLKFIHTVIPTID 248



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 7/83 (8%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S   + G +TPEEFVAAGD L+ +CP W W S  E     YLP +KQ+LI + V C +R 
Sbjct: 23  STLIKDGKLTPEEFVAAGDCLIANCPVWSWCSAPEGHEVDYLPKDKQYLINRRVVCQKRA 82

Query: 339 KQIDYCEEKQKIIENEQD-EEGW 360
             +       K+++ E D  +GW
Sbjct: 83  TDL------SKMMQEEVDIGDGW 99



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T++QMY+D+S DYA KTVT E+HP        SIHPC+
Sbjct: 172 LTLEQMYQDISADYADKTVTYENHP-FTATKNLSIHPCQ 209



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 22/77 (28%)

Query: 159 EDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHI 218
           E +DDEEA+D+++ +    +DE +P +  +                  D++  RTYD+ I
Sbjct: 112 EINDDEEAVDLDEID----IDEIEPEVQEV------------------DVIDYRTYDISI 149

Query: 219 TYDKYYQTPRLWLYGYN 235
            YDK+Y    ++LYG N
Sbjct: 150 CYDKFYNVAHIFLYGVN 166


>gi|448088939|ref|XP_004196673.1| Piso0_003898 [Millerozyma farinosa CBS 7064]
 gi|448093110|ref|XP_004197704.1| Piso0_003898 [Millerozyma farinosa CBS 7064]
 gi|359378095|emb|CCE84354.1| Piso0_003898 [Millerozyma farinosa CBS 7064]
 gi|359379126|emb|CCE83323.1| Piso0_003898 [Millerozyma farinosa CBS 7064]
          Length = 344

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 9/153 (5%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           + EYLTPV   S F  TG ++P+EFV AGD+LV   PTWQW S  E   +++LP +KQ+L
Sbjct: 9   LREYLTPVKHNSNFATTGEISPDEFVTAGDYLVSKFPTWQWGSTPEKLRRTFLPDDKQYL 68

Query: 328 ITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTH--HYDETT---GKDIAIEDKISE 382
           +T++VP  +R        +     E E  E+GWV T   H +E T   GK +  E+K   
Sbjct: 69  VTRHVPSYQRAAD-SLGAKDSLEDEEELAEDGWVKTRRTHAEEKTDEAGKALGPEEKQES 127

Query: 383 ISLDASTGWVDTHHYDETTGKDIAIEDKISEIS 415
              D S+  + +   ++T G   + ED + EIS
Sbjct: 128 TGTDQSSN-IGSASKEKTQGD--SQEDNVEEIS 157



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 43/137 (31%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL+  QM+ED++ DY  KT T+ES P        SIHPC+H+ VMK +
Sbjct: 210 VGFSSSGI----PLSPKQMFEDIAVDYRDKTSTIESLPVSYNTTSVSIHPCKHSSVMKVL 265

Query: 61  I-------ETVLEGGGE---------------LG-----------------VHMYLIIFL 81
           +       +T LE   +               LG                 V  YLIIFL
Sbjct: 266 MAHAASAKKTQLEKKRQAIVDKNPSESLKELNLGPDEDDDPYADPDASPIRVDHYLIIFL 325

Query: 82  KFVQSVIPTIEYDFTQN 98
           KF+ SV P IEYD+T +
Sbjct: 326 KFIASVTPGIEYDYTMD 342



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 12/63 (19%)

Query: 75  MYLIIFLKFVQSVIPTIEYDFTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIH 134
           MYL+    F  S IP          +  QM+ED++ DY  KT T+ES P        SIH
Sbjct: 207 MYLV---GFSSSGIP---------LSPKQMFEDIAVDYRDKTSTIESLPVSYNTTSVSIH 254

Query: 135 PCR 137
           PC+
Sbjct: 255 PCK 257


>gi|357580421|sp|C8VDI2.1|ATG3_EMENI RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
 gi|259484065|tpe|CBF79968.1| TPA: Autophagy-related protein 3 (Autophagy-related E2-like
           conjugation enzyme atg3)
           [Source:UniProtKB/Swiss-Prot;Acc:Q5AVG2] [Aspergillus
           nidulans FGSC A4]
          Length = 365

 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 1/70 (1%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  P+W W      SK  SYLPP KQFL+T+
Sbjct: 15  LAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPSWSWGDASSPSKRVSYLPPGKQFLVTR 74

Query: 331 NVPCPRRCKQ 340
            VPC RR  +
Sbjct: 75  GVPCHRRLNE 84



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 208 PLPPKLMMEDIVGDYKDKTVTLEDFPWFDGSLQMASVHPCRHASVMKTLLD 258



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 214 MMEDIVGDYKDKTVTLEDFPWFDGSLQMASVHPCR 248


>gi|402084616|gb|EJT79634.1| autophagy-like protein 3 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 358

 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 8/90 (8%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-AS 310
           N + SV+N+++       +   PV   S FRETG +TPEEFVAAGD+L    PTW W  +
Sbjct: 2   NSLYSVVNTLR-------DRYAPVSHTSTFRETGEITPEEFVAAGDYLAFKFPTWSWADA 54

Query: 311 GDESKAKSYLPPNKQFLITKNVPCPRRCKQ 340
             E++  S+LPP KQFL+T+NVPC RR  +
Sbjct: 55  DAEARRASHLPPGKQFLVTRNVPCNRRLNE 84



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 57/139 (41%), Gaps = 53/139 (38%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETV------- 64
           PL    M ED+  DY  KTVT+E  P    P  MAS+HPC+HA VMK +++         
Sbjct: 219 PLPPQLMMEDIMGDYKDKTVTLEDFPFFASPVKMASVHPCKHAPVMKTLLDRADAALKQR 278

Query: 65  -------------LEG------------GGE--------------------LGVHMYLII 79
                        LEG            G E                    + V  YL++
Sbjct: 279 REKLRSGAAAAAGLEGLTDDISKLSVSAGVESSNEDWEDIQHDDVADQEVAIRVDQYLVV 338

Query: 80  FLKFVQSVIPTIEYDFTQN 98
           FLKF+ SV P IE+DFT  
Sbjct: 339 FLKFIASVTPGIEHDFTMG 357



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 201 DSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           D+   G     RTY L+I Y  YY+TPRL+L GY
Sbjct: 180 DTDASGQTTGRRTYTLYIMYSPYYRTPRLYLSGY 213



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P    P  MAS+HPC+
Sbjct: 225 MMEDIMGDYKDKTVTLEDFPFFASPVKMASVHPCK 259


>gi|119181769|ref|XP_001242068.1| hypothetical protein CIMG_05964 [Coccidioides immitis RS]
          Length = 665

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 14/105 (13%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L P+   S FR TG +TPEEFV AGD+LV+  PTW WA    +K   YLP  KQFL+T+ 
Sbjct: 304 LAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWADAPPAKRVPYLPEGKQFLVTRG 363

Query: 332 VPCPRRCKQIDYCEEKQK---II----------ENEQDEEGWVDT 363
           VPC RR  + ++  +  K   +I          E E ++ GW++T
Sbjct: 364 VPCHRRLDE-NFAGDAGKEDVMIKDGLGSGDGKEGEDEDYGWLNT 407



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PLT   M ED+  DY  KTVT+E  P    G  MAS+HPC+HA VMK +++
Sbjct: 507 PLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCKHASVMKILLD 557



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  +Y+TPRL+L GY
Sbjct: 479 RTYSLYITYTPWYRTPRLYLSGY 501



 Score = 37.7 bits (86), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 96  TQNFTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCR 137
           ++  T   M ED+  DY  KTVT+E  P    G  MAS+HPC+
Sbjct: 505 SEPLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCK 547


>gi|294656598|ref|XP_458896.2| DEHA2D09900p [Debaryomyces hansenii CBS767]
 gi|218511937|sp|Q6BSC4.2|ATG3_DEBHA RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|199431593|emb|CAG87049.2| DEHA2D09900p [Debaryomyces hansenii CBS767]
          Length = 324

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 3/98 (3%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW+S  +   K +LPP+KQ+L
Sbjct: 9   LREYLTPIRHTSDFTTTGEISPEEFVEAGDYLVYKFPTWQWSSAPDKLKKDFLPPDKQYL 68

Query: 328 ITKNVPCPRRCKQIDYCEEKQ-KIIENEQDEEGWVDTH 364
           ITK+V   +R   + Y   K     + E+ E+GWV +H
Sbjct: 69  ITKHVSSYQRA--VTYLGIKSDLDEDEEELEDGWVKSH 104



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 61/137 (44%), Gaps = 43/137 (31%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N+ G+    PL   QM+ED+S DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 190 VGFNSNGI----PLLPKQMFEDISGDYRDKTATIETLPVSYNTMSVSIHPCKHSSVMKVL 245

Query: 61  ---------------IETVLEGGGELG------------------------VHMYLIIFL 81
                          +  + E  G L                         V  YLIIFL
Sbjct: 246 MAHAAASKKRENPADLTDLAEQTGSLNLKDKVPGRDFGEDVDIEENVPGIRVDQYLIIFL 305

Query: 82  KFVQSVIPTIEYDFTQN 98
           KF+ SV P IEYD+T +
Sbjct: 306 KFIASVTPGIEYDYTMD 322



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QM+ED+S DY  KT T+E+ P        SIHPC+
Sbjct: 203 QMFEDISGDYRDKTATIETLPVSYNTMSVSIHPCK 237


>gi|116193741|ref|XP_001222683.1| hypothetical protein CHGG_06588 [Chaetomium globosum CBS 148.51]
 gi|121785092|sp|Q2H427.1|ATG3_CHAGB RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|88182501|gb|EAQ89969.1| hypothetical protein CHGG_06588 [Chaetomium globosum CBS 148.51]
          Length = 338

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 14/118 (11%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N + S +NS++       +  TP    S FR TG +TPEEFVAAGD+LV   P+W W+  
Sbjct: 2   NIIYSTVNSLR-------DRYTPASHTSTFRNTGEITPEEFVAAGDYLVFKFPSWTWSDA 54

Query: 312 DE-SKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQD--EEGWVDT 363
           +  +K  ++LPP KQ+L+T+NVPC RR    D+  +   ++ ++E  ++  ++GW+ T
Sbjct: 55  ETPAKRVAHLPPEKQYLVTRNVPCHRRLND-DFAGDAGHEEAVVEGGKNSGDDGWLRT 111



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 19  MYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIE 62
           M ED+  DY  KTVT+E  P        ASIHPC+HA VMK +++
Sbjct: 205 MMEDIVGDYKDKTVTLEDFPFFATSVKTASIHPCKHAPVMKTLLD 249


>gi|67901462|ref|XP_680987.1| hypothetical protein AN7718.2 [Aspergillus nidulans FGSC A4]
 gi|40742043|gb|EAA61233.1| hypothetical protein AN7718.2 [Aspergillus nidulans FGSC A4]
          Length = 787

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 1/89 (1%)

Query: 253 RMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SG 311
           R +  +N +  T     + L PV + S FR TG +TPEEFV AGD+LV+  P+W W  + 
Sbjct: 55  RSKPKMNILHSTLSTWRDRLAPVSRTSTFRTTGQITPEEFVLAGDYLVYKFPSWSWGDAS 114

Query: 312 DESKAKSYLPPNKQFLITKNVPCPRRCKQ 340
             SK  SYLPP KQFL+T+ VPC RR  +
Sbjct: 115 SPSKRVSYLPPGKQFLVTRGVPCHRRLNE 143



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 267 PLPPKLMMEDIVGDYKDKTVTLEDFPWFDGSLQMASVHPCRHASVMKTLLD 317



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           V  YL++FLKF+ SV P IE+DFT  + V
Sbjct: 398 VDQYLVVFLKFIASVTPGIEHDFTMGYCV 426



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 273 MMEDIVGDYKDKTVTLEDFPWFDGSLQMASVHPCR 307


>gi|342906004|gb|AEL79285.1| autophagocytosis associated protein [Rhodnius prolixus]
          Length = 115

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 49/65 (75%), Gaps = 5/65 (7%)

Query: 172 FEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWL 231
           FEESG LDE+D S+ANIP      S+      E G+IV+TRTYDLHITYD+YYQTPRLWL
Sbjct: 43  FEESGLLDEEDNSLANIPK-----STAEETVIEDGEIVKTRTYDLHITYDEYYQTPRLWL 97

Query: 232 YGYNE 236
            GY+E
Sbjct: 98  TGYDE 102


>gi|340503483|gb|EGR30067.1| hypothetical protein IMG5_143150 [Ichthyophthirius multifiliis]
          Length = 163

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 5/103 (4%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII 61
           G N  G     PL   Q+ ED+  +Y  +TVT E HPHL G    +IHPC+H++V+K  I
Sbjct: 66  GTNEDG----KPLNTQQILEDIMSEYQGETVTPEEHPHL-GLKQVTIHPCKHSQVLKAFI 120

Query: 62  ETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVDQM 104
           E   E    L  +  L+IFLKF+ SV+PTIEYD T +   DQ+
Sbjct: 121 EKAKENKVNLKPNQCLLIFLKFMSSVMPTIEYDATTDLLFDQI 163



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 18/25 (72%), Positives = 21/25 (84%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNE 236
           RTYD+ ITYD+YY TPR+WL G NE
Sbjct: 45  RTYDISITYDEYYHTPRMWLSGTNE 69


>gi|255949500|ref|XP_002565517.1| Pc22g16010 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|166990600|sp|A7KAL4.1|ATG3_PENCW RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
 gi|129561971|gb|ABO31074.1| Atg3p [Penicillium chrysogenum]
 gi|211592534|emb|CAP98889.1| Pc22g16010 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 363

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  PTW WA     +K  SYLP  KQFL+T+
Sbjct: 15  LAPVSRTSTFRNTGQITPEEFVLAGDYLVYKFPTWSWADASSPAKRVSYLPDGKQFLVTR 74

Query: 331 NVPCPRRC 338
            VPC RR 
Sbjct: 75  GVPCHRRL 82



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 56/148 (37%), Gaps = 62/148 (41%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKII---------- 61
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK ++          
Sbjct: 215 PLPPHLMMEDIVGDYKDKTVTLEDFPWFEGSVKMASVHPCRHASVMKTLLDRADAALKLR 274

Query: 62  -------------ETVLEGGGEL------------------------------------- 71
                        + VL  GG L                                     
Sbjct: 275 RDKLKQTQSRDEADRVLRAGGGLEGLVDETKNMSLGDSHHAQPGGDEWEMLQRDEEEQVA 334

Query: 72  -GVHMYLIIFLKFVQSVIPTIEYDFTQN 98
             V  YL++FLKF+ SV P IE+DFT  
Sbjct: 335 IRVDQYLVVFLKFIASVTPGIEHDFTMG 362



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 221 MMEDIVGDYKDKTVTLEDFPWFEGSVKMASVHPCR 255



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  +Y+TPRL+L GY
Sbjct: 187 RTYTLYITYSNFYRTPRLYLSGY 209


>gi|258572228|ref|XP_002544876.1| hypothetical protein UREG_04393 [Uncinocarpus reesii 1704]
 gi|237905146|gb|EEP79547.1| hypothetical protein UREG_04393 [Uncinocarpus reesii 1704]
          Length = 363

 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 46/69 (66%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L P+   S FR TG +TPEEFV AGD+LV+  PTW WA    +K  SYLP  KQ+L+T+ 
Sbjct: 11  LAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWADAPAAKRVSYLPEGKQYLVTRG 70

Query: 332 VPCPRRCKQ 340
           VPC RR  +
Sbjct: 71  VPCHRRLDE 79



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 207 PLPPQLMMEDIVGDYKDKTVTLEDFPFFDGGIKMASVHPCRHASVMKILLD 257



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 213 MMEDIVGDYKDKTVTLEDFPFFDGGIKMASVHPCR 247


>gi|296005163|ref|XP_002808915.1| autophagocytosis associated protein, putative [Plasmodium
           falciparum 3D7]
 gi|225631799|emb|CAX64196.1| autophagocytosis associated protein, putative [Plasmodium
           falciparum 3D7]
          Length = 313

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 57/99 (57%)

Query: 256 SVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESK 315
           +V + +  T   +  Y   V   S F + G +TP EFV +GD LV+   TW+W   D+ +
Sbjct: 6   NVKHKIGDTCRKLYSYFKTVNNTSTFIQNGTLTPSEFVDSGDFLVYKFKTWEWQEADKDR 65

Query: 316 AKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENE 354
              YLP NKQFLITKNVPC +R K ++      KI++N+
Sbjct: 66  VVPYLPENKQFLITKNVPCKQRIKDLNNIVHDLKIVDND 104



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 5/101 (4%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G N  G     PL  ++++ED+  DY+ KTVT + HP   G   ASIHPC+HAE +  +
Sbjct: 210 FGYNENG----DPLKSEEIFEDILSDYSYKTVTYDPHP-CTGVMTASIHPCKHAEAILNV 264

Query: 61  IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
           +   +    E    +YL+  LKF+  VIPTIEYDFT +  +
Sbjct: 265 VNNWISEEKEPRHDLYLLFLLKFISGVIPTIEYDFTTDIEI 305



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 8/73 (10%)

Query: 166 ALDMEDFE-ESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYY 224
           A+D+ +F  E+  + E DP+  N        +S    +    ++++ RTYD+ ITYDKYY
Sbjct: 150 AIDINNFYMENNLIKEHDPASIN-------STSCYSKNMLHDNLMKIRTYDVSITYDKYY 202

Query: 225 QTPRLWLYGYNER 237
           QTPR+WL+GYNE 
Sbjct: 203 QTPRIWLFGYNEN 215



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++++ED+  DY+ KTVT + HP   G   ASIHPC+
Sbjct: 222 EEIFEDILSDYSYKTVTYDPHP-CTGVMTASIHPCK 256


>gi|452984065|gb|EME83822.1| hypothetical protein MYCFIDRAFT_119622, partial [Pseudocercospora
           fijiensis CIRAD86]
          Length = 359

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQF 326
           + +   P+   S FR TG +TPEEF AAGD LVH  P+W WA +  ES+  SY P +KQ+
Sbjct: 11  LRDRFAPISHNSDFRTTGQITPEEFQAAGDFLVHKFPSWSWAGAASESQRVSYFPADKQY 70

Query: 327 LITKNVPCPRRCKQIDYC 344
           LIT+ VPC +R K  D+ 
Sbjct: 71  LITRGVPCRKRIKADDFA 88



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPM--ASIHPCRHAEVMKKIIE 62
           S  PL    M ED+  DY  KTVT+E   +   PP+  AS+HPC+HA VMK +++
Sbjct: 208 SNKPLLPMAMMEDIVGDYKDKTVTLEDF-NFTNPPIKTASVHPCKHASVMKVLLD 261



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNERFK 239
           R Y L+ITY  YY+TPRL+L GY+   K
Sbjct: 183 RNYTLYITYTPYYRTPRLYLSGYDSSNK 210


>gi|425774226|gb|EKV12540.1| Autophagy-related protein 3 [Penicillium digitatum Pd1]
 gi|425776322|gb|EKV14544.1| Autophagy-related protein 3 [Penicillium digitatum PHI26]
          Length = 363

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITK 330
           L PV + S FR TG +TPEEFV AGD+LV+  PTW WA     +K  SYLP  KQFL+T+
Sbjct: 15  LAPVSRTSTFRNTGQITPEEFVLAGDYLVYKFPTWSWADASSPAKRVSYLPDGKQFLVTR 74

Query: 331 NVPCPRRC 338
            VPC RR 
Sbjct: 75  GVPCHRRL 82



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 215 PLPPHLMMEDIVGDYKDKTVTLEDFPWFEGSVKMASVHPCRHASVMKTLLD 265



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 221 MMEDIVGDYKDKTVTLEDFPWFEGSVKMASVHPCR 255



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  +Y+TPRL+L GY
Sbjct: 187 RTYTLYITYSNFYRTPRLYLSGY 209


>gi|150865998|ref|XP_001385446.2| protein involved in autophagocytosis during starvation
           [Scheffersomyces stipitis CBS 6054]
 gi|166990668|sp|A3LX85.2|ATG3_PICST RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|149387254|gb|ABN67417.2| protein involved in autophagocytosis during starvation
           [Scheffersomyces stipitis CBS 6054]
          Length = 318

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/71 (52%), Positives = 52/71 (73%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW++  ++  KS+LP +KQFL
Sbjct: 9   LREYLTPINHNSNFSTTGEISPEEFVQAGDYLVYKFPTWQWSTCPKNLQKSFLPADKQFL 68

Query: 328 ITKNVPCPRRC 338
           IT++VP  +R 
Sbjct: 69  ITRHVPSYQRA 79



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 42/136 (30%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G N  G+    PLT DQM+ED++ DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 185 VGFNANGI----PLTPDQMFEDINADYKDKTATIENLPVAHNTTSVSIHPCKHSSVMKVL 240

Query: 61  I---------ETVLEGGGELG-----------------------------VHMYLIIFLK 82
           +         E V     ELG                             V  YL+IFLK
Sbjct: 241 MKHSKSKKTREEVNHLSEELGKTNISDKSQEDTGKDAEAAAGPEAEDSIRVDQYLVIFLK 300

Query: 83  FVQSVIPTIEYDFTQN 98
           F+ SV P IEYD+T +
Sbjct: 301 FIASVTPGIEYDYTMD 316



 Score = 41.2 bits (95), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 24/39 (61%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T DQM+ED++ DY  KT T+E+ P        SIHPC+
Sbjct: 194 LTPDQMFEDINADYKDKTATIENLPVAHNTTSVSIHPCK 232


>gi|156844314|ref|XP_001645220.1| hypothetical protein Kpol_1060p18 [Vanderwaltozyma polyspora DSM
           70294]
 gi|166990609|sp|A7TK16.1|ATG3_VANPO RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|156115879|gb|EDO17362.1| hypothetical protein Kpol_1060p18 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 318

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 3/102 (2%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-ASGDESKAKSY 319
           ++ T     EYLTPV  +S F  +G +TP+EFV AGD+L H  PTW+W  +G++   +++
Sbjct: 2   LRSTLSSWREYLTPVSHKSTFLSSGQITPDEFVQAGDYLCHMFPTWEWNKAGNDVLFRNF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQIDYCEE--KQKIIENEQDEEG 359
           LP +KQFL+ + VPC  R KQ    ++   +  ++   DE+G
Sbjct: 62  LPEDKQFLVMRKVPCNVRAKQFVNIDDSASEAFVQGINDEDG 103



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 36/128 (28%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKK 59
           +G N  G    +PLT ++M+ED++ DY  KT T+E  P         SIHPC+HA VM+ 
Sbjct: 191 VGFNGSG----SPLTPEEMFEDIAPDYRSKTATIEKLPFYKNTISSVSIHPCKHANVMRI 246

Query: 60  IIETVL-----------EGGGE--------------------LGVHMYLIIFLKFVQSVI 88
           +++ VL           E   E                    +    YLIIFLKF+ SV 
Sbjct: 247 LLDKVLVVKRRRREEMSENHNEHKPNPESDEWEDLQNDVDDTIRADQYLIIFLKFITSVT 306

Query: 89  PTIEYDFT 96
           P IE+D+T
Sbjct: 307 PGIEHDYT 314


>gi|156097124|ref|XP_001614595.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Plasmodium vivax Sal-1]
 gi|148803469|gb|EDL44868.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Plasmodium vivax]
          Length = 317

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 256 SVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESK 315
           +V + +  T   V  Y  P+   S F + G +TP EFV AGD LVH   TW+W   D ++
Sbjct: 6   NVKHKIGDTYRKVYSYFKPITNSSSFVKNGTLTPAEFVDAGDFLVHKFRTWEWQDVDTNR 65

Query: 316 AKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDI 374
              +LP  KQFL+TKNV C +R K + Y     K +EN+     W+   + +E    DI
Sbjct: 66  RVPHLPEGKQFLLTKNVACKQRIKDLSYIMRDVKTVEND-----WLLPSYEEENNATDI 119



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 3/84 (3%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL  ++++ED+S +Y+ +T   + HP   G   ASIHPCRHAE M  I++  +  G E  
Sbjct: 226 PLKSEEIFEDISAEYSYET--YDPHP-CTGVMTASIHPCRHAEAMLNIVKNWMSEGKEPR 282

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFT 96
             +YL+  LKFV  VIPTIEYDFT
Sbjct: 283 HDLYLLFLLKFVSGVIPTIEYDFT 306



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 8/73 (10%)

Query: 167 LDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECG---DIVRTRTYDLHITYDKY 223
           +D+++FE        DP+   I  +  +  + AG     G   ++++ RTYD+ ITYDKY
Sbjct: 155 IDIQNFEAHF-----DPNFDLIKEDDPAALNHAGLYSYGGQNENVMKIRTYDVSITYDKY 209

Query: 224 YQTPRLWLYGYNE 236
           Y+TPR+WL+GY+E
Sbjct: 210 YETPRIWLFGYDE 222


>gi|406861252|gb|EKD14307.1| autophagocytosis protein [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 363

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N +  T   V E+  PV   S FR+ G +TPEEFVAAGD+LV+  PTW WA     SK 
Sbjct: 1   MNFIHSTLDRVREW-APVSHTSTFRQNGQITPEEFVAAGDYLVYKFPTWSWADASPVSKR 59

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
            SYLP  KQFL+T+ VPC RR 
Sbjct: 60  ASYLPAGKQFLVTRGVPCHRRL 81



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P+      MAS+HPC+HA VMK +++
Sbjct: 208 PLPPQLMMEDIVGDYKDKTVTLEDFPYFSNNIKMASVHPCKHASVMKTLLD 258



 Score = 37.7 bits (86), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 18/23 (78%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+I Y  YY+TPRL+L GY
Sbjct: 180 RTYTLYIAYTPYYRTPRLYLSGY 202


>gi|366995151|ref|XP_003677339.1| hypothetical protein NCAS_0G00990 [Naumovozyma castellii CBS 4309]
 gi|342303208|emb|CCC70986.1| hypothetical protein NCAS_0G00990 [Naumovozyma castellii CBS 4309]
          Length = 305

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW-ASGDESKAKSY 319
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+LVH  P W+W  S  +   + +
Sbjct: 2   LRSTISSWREYLTPISHKSTFLSTGQITPEEFVLAGDYLVHRFPIWKWNESVVDVSVRDF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEG 359
           LP  KQFL+ + VPC  R + +   E+++   +N+  EEG
Sbjct: 62  LPAEKQFLVIRKVPCMERAQDMLNVEDERGESDNQGLEEG 101



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 36/128 (28%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHP-HLPGPPMASIHPCRHAEVMKK 59
           +G N  G    +PLT +QM+ED+S DY  KT T+E+ P + P  P  SIHPC+HA +MK 
Sbjct: 178 VGFNGDG----SPLTPEQMFEDISADYRAKTATIENLPFYKPSIPSVSIHPCKHANIMKI 233

Query: 60  IIETVL-------------------------------EGGGELGVHMYLIIFLKFVQSVI 88
           ++E V                                +    L    YL+IFLKF+ SV 
Sbjct: 234 LLEKVRLINHRRRSEQEEDHEAKNVKQDTEDWEDLQKDVYDTLRADQYLVIFLKFITSVT 293

Query: 89  PTIEYDFT 96
           PTIE+D+T
Sbjct: 294 PTIEHDYT 301



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHP-HLPGPPMASIHPCR--AIKSKASNQTQSCNKPNS 155
            T +QM+ED+S DY  KT T+E+ P + P  P  SIHPC+   I      + +  N    
Sbjct: 187 LTPEQMFEDISADYRAKTATIENLPFYKPSIPSVSIHPCKHANIMKILLEKVRLINHRRR 246

Query: 156 TEEEDDDDEEAL--DMEDFEE 174
           +E+E+D + + +  D ED+E+
Sbjct: 247 SEQEEDHEAKNVKQDTEDWED 267


>gi|398365567|ref|NP_014404.3| Atg3p [Saccharomyces cerevisiae S288c]
 gi|732206|sp|P40344.1|ATG3_YEAST RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|166990610|sp|A6ZS81.1|ATG3_YEAS7 RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|496724|emb|CAA54575.1| N2040 [Saccharomyces cerevisiae]
 gi|1302480|emb|CAA96284.1| AUT1 [Saccharomyces cerevisiae]
 gi|151944535|gb|EDN62813.1| autophagy-related protein [Saccharomyces cerevisiae YJM789]
 gi|190408992|gb|EDV12257.1| hypothetical protein SCRG_03135 [Saccharomyces cerevisiae RM11-1a]
 gi|207341599|gb|EDZ69608.1| YNR007Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273374|gb|EEU08312.1| Atg3p [Saccharomyces cerevisiae JAY291]
 gi|259148956|emb|CAY82200.1| Atg3p [Saccharomyces cerevisiae EC1118]
 gi|285814654|tpg|DAA10548.1| TPA: Atg3p [Saccharomyces cerevisiae S288c]
 gi|323335727|gb|EGA77008.1| Atg3p [Saccharomyces cerevisiae Vin13]
 gi|323346743|gb|EGA81024.1| Atg3p [Saccharomyces cerevisiae Lalvin QA23]
 gi|349580941|dbj|GAA26100.1| K7_Atg3p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|365763398|gb|EHN04927.1| Atg3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392296995|gb|EIW08096.1| Atg3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 310

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSY- 319
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+L H  PTW+W   +ES   SY 
Sbjct: 2   IRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKW--NEESSDISYR 59

Query: 320 --LPPNKQFLITKNVPCPRRCKQ 340
             LP NKQFLI + VPC +R +Q
Sbjct: 60  DFLPKNKQFLIIRKVPCDKRAEQ 82



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 32/124 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G N+ G    +PL+ +QM+ED+S DY  KT T+E  P      ++ SIHPC+HA VMK 
Sbjct: 187 VGFNSNG----SPLSPEQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKI 242

Query: 60  II----------------ETVLEGGGE-----------LGVHMYLIIFLKFVQSVIPTIE 92
           ++                E  L+G G+           L V  YLI+FLKF+ SV P+I+
Sbjct: 243 LLDKVRVVRQRRRKELQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTPSIQ 302

Query: 93  YDFT 96
           +D+T
Sbjct: 303 HDYT 306



 Score = 38.5 bits (88), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCR 137
           +QM+ED+S DY  KT T+E  P      ++ SIHPC+
Sbjct: 199 EQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCK 235


>gi|126030345|pdb|2DYT|A Chain A, The Crystal Structure Of Saccharomyces Cerevisiae Atg3
          Length = 312

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSY- 319
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+L H  PTW+W   +ES   SY 
Sbjct: 4   IRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKW--NEESSDISYR 61

Query: 320 --LPPNKQFLITKNVPCPRRCKQ 340
             LP NKQFLI + VPC +R +Q
Sbjct: 62  DFLPKNKQFLIIRKVPCDKRAEQ 84



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 32/124 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G N+ G    +PL+ +QM+ED+S DY  KT T+E  P      ++ SIHPC+HA VMK 
Sbjct: 189 VGFNSNG----SPLSPEQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKI 244

Query: 60  II----------------ETVLEGGGE-----------LGVHMYLIIFLKFVQSVIPTIE 92
           ++                E  L+G G+           L V  YLI+FLKF+ SV P+I+
Sbjct: 245 LLDKVRVVRQRRRKELQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTPSIQ 304

Query: 93  YDFT 96
           +D+T
Sbjct: 305 HDYT 308



 Score = 38.5 bits (88), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCR 137
           +QM+ED+S DY  KT T+E  P      ++ SIHPC+
Sbjct: 201 EQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCK 237


>gi|50290141|ref|XP_447502.1| hypothetical protein [Candida glabrata CBS 138]
 gi|62899753|sp|Q6FQJ2.1|ATG3_CANGA RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|49526812|emb|CAG60439.1| unnamed protein product [Candida glabrata]
          Length = 309

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 1/73 (1%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS-GDESKAKSYLPPNKQFLI 328
           EYLTPV  +S F  TG +TPEEFV AGD+L H  PTW+W    D++K + +LP +KQFL+
Sbjct: 11  EYLTPVSHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKWNDMADDNKYRDFLPKDKQFLV 70

Query: 329 TKNVPCPRRCKQI 341
            + VPC  R + +
Sbjct: 71  IRKVPCSERAQAV 83



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 43/135 (31%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHP-HLPGPPMASIHPCRHAEVMKK 59
           +G N  G     PLT  +M+ED++ DY KKT T+E  P +    P  SIHPC+HA VMK 
Sbjct: 175 VGFNGNG----TPLTPKEMFEDITPDYRKKTATIEKLPFYKRNVPSVSIHPCKHANVMKV 230

Query: 60  IIETV-----------LEGGGELG---------------------------VHMYLIIFL 81
           +++ +           ++   E+G                           V +YL++FL
Sbjct: 231 LLDKISVVKERQREEEMQKNAEVGAPKSAGSDDGDNENWEDLQQDIDDSLRVDLYLVVFL 290

Query: 82  KFVQSVIPTIEYDFT 96
           KF+ SV PTI++D+T
Sbjct: 291 KFITSVTPTIQHDYT 305



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHP-HLPGPPMASIHPCR 137
            T  +M+ED++ DY KKT T+E  P +    P  SIHPC+
Sbjct: 184 LTPKEMFEDITPDYRKKTATIEKLPFYKRNVPSVSIHPCK 223


>gi|452000342|gb|EMD92803.1| hypothetical protein COCHEDRAFT_1132918 [Cochliobolus
           heterostrophus C5]
          Length = 351

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITKNVPCPRR 337
           S FRETG +TPEEFV AGD LV   P+WQWA     SK  SYLP  KQFL+T+ VPC RR
Sbjct: 24  STFRETGQITPEEFVLAGDFLVFKFPSWQWADASSPSKRVSYLPEGKQFLVTRGVPCHRR 83

Query: 338 CKQIDYCEEKQK---IIENEQDEEGWVDTHHYDETTGKDIAIEDKISEI 383
                  E  Q    + +    EEG  D   +  T G   + E K+ ++
Sbjct: 84  LDDNFAGEAGQDETIVRDGFTAEEGATDDDGWLRTGGMAASQEAKVRDV 132



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL   +M ED+  DY  KTVT+E  P    P   AS+HPC+HA VMK +++
Sbjct: 206 PLKPQEMMEDIVGDYKDKTVTIEDFPFFENPLKTASVHPCKHASVMKVLLD 256



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           RTY L+ITY  +Y+TPRL+L GY 
Sbjct: 178 RTYTLYITYSAHYRTPRLYLSGYG 201


>gi|323352459|gb|EGA84960.1| Atg3p [Saccharomyces cerevisiae VL3]
          Length = 239

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 5/83 (6%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSY- 319
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+L H  PTW+W   +ES   SY 
Sbjct: 2   IRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLCHMFPTWKW--NEESSDISYR 59

Query: 320 --LPPNKQFLITKNVPCPRRCKQ 340
             LP NKQFLI + VPC +R +Q
Sbjct: 60  DFLPKNKQFLIIRKVPCDKRAEQ 82


>gi|392864964|gb|EAS30697.2| autophagocytosis protein Aut1 [Coccidioides immitis RS]
          Length = 372

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 12/104 (11%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L P+   S FR TG +TPEEFV AGD+LV+  PTW WA    +K   YLP  KQFL+T+ 
Sbjct: 11  LAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWADAPPAKRVPYLPEGKQFLVTRG 70

Query: 332 VPCPRRCKQ---IDYCEEKQKI---------IENEQDEEGWVDT 363
           VPC RR  +    D  +E   I          E E ++ GW++T
Sbjct: 71  VPCHRRLDENFAGDAGKEDVMIKDGLGSGDGKEGEDEDYGWLNT 114



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PLT   M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 214 PLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCKHASVMKILLD 264



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 96  TQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           ++  T   M ED+  DY  KTVT+E  P   G   MAS+HPC+
Sbjct: 212 SEPLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCK 254



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  +Y+TPRL+L GY
Sbjct: 186 RTYSLYITYTPWYRTPRLYLSGY 208


>gi|303318727|ref|XP_003069363.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Coccidioides posadasii C735 delta SOWgp]
 gi|240109049|gb|EER27218.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Coccidioides posadasii C735 delta SOWgp]
          Length = 370

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 12/104 (11%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L P+   S FR TG +TPEEFV AGD+LV+  PTW WA    +K   YLP  KQFL+T+ 
Sbjct: 11  LAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWADAPPAKRVPYLPEGKQFLVTRG 70

Query: 332 VPCPRRCKQ---IDYCEEKQKI---------IENEQDEEGWVDT 363
           VPC RR  +    D  +E   I          E E ++ GW++T
Sbjct: 71  VPCHRRLDENFAGDAGKEDVMIKDGLGSGDGKEGEDEDYGWLNT 114



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PLT   M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 212 PLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCKHASVMKILLD 262



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 96  TQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           ++  T   M ED+  DY  KTVT+E  P   G   MAS+HPC+
Sbjct: 210 SEPLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCK 252



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  +Y+TPRL+L GY
Sbjct: 184 RTYSLYITYTPWYRTPRLYLSGY 206


>gi|320034494|gb|EFW16438.1| autophagocytosis protein Aut1 [Coccidioides posadasii str.
           Silveira]
          Length = 370

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 12/104 (11%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L P+   S FR TG +TPEEFV AGD+LV+  PTW WA    +K   YLP  KQFL+T+ 
Sbjct: 11  LAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWADAPPAKRVPYLPEGKQFLVTRG 70

Query: 332 VPCPRRCKQ---IDYCEEKQKI---------IENEQDEEGWVDT 363
           VPC RR  +    D  +E   I          E E ++ GW++T
Sbjct: 71  VPCHRRLDENFAGDAGKEDVMIKDGLGSGDGKEGEDEDYGWLNT 114



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PLT   M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 212 PLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCKHASVMKILLD 262



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 96  TQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           ++  T   M ED+  DY  KTVT+E  P   G   MAS+HPC+
Sbjct: 210 SEPLTPQLMMEDIVGDYKDKTVTLEDFPFYDGGVKMASVHPCK 252



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  +Y+TPRL+L GY
Sbjct: 184 RTYSLYITYTPWYRTPRLYLSGY 206


>gi|118349994|ref|XP_001008278.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Tetrahymena thermophila]
 gi|89290045|gb|EAR88033.1| Autophagocytosis associated protein, C-terminal domain containing
           protein [Tetrahymena thermophila SB210]
          Length = 225

 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 1/92 (1%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG 69
           ++ PL  +QM+EDV  +Y  +TVT+E HPHL G    +IHPC+H++++K  I+   E G 
Sbjct: 135 NQKPLKKEQMFEDVMPEYRDETVTLEKHPHL-GYDQMTIHPCKHSQILKSFIDQAKENGR 193

Query: 70  ELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            +  +  LIIFLKFV SV+PT+E + T +  +
Sbjct: 194 TIKPNQALIIFLKFVGSVLPTLEIETTTDLEI 225



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           +QM+EDV  +Y  +TVT+E HPHL G    +IHPC+
Sbjct: 142 EQMFEDVMPEYRDETVTLEKHPHL-GYDQMTIHPCK 176



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 197 SPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           S A D+QE  +    R Y+  ITYD YY  PR+W  G +E
Sbjct: 97  SNAQDNQEEEE--EMRIYNFSITYDTYYHVPRIWFSGVDE 134


>gi|226290558|gb|EEH46042.1| autophagy-related protein 3 [Paracoccidioides brasiliensis Pb18]
          Length = 387

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N V+ T     E L PV   S FR TG +TPEEFV AGD+LV+  PTW W      +K 
Sbjct: 1   MNVVRSTLSTWRERLAPVSHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDASSLAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P    G  MAS+HPCRHA VMK +++
Sbjct: 213 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 263



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 3/37 (8%)

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           PAG   + G     RTY L+ITY  YY+TPRL+L GY
Sbjct: 174 PAG---KAGTDSPLRTYTLYITYSTYYRTPRLYLSGY 207



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCR 137
           M ED+  DY  KTVT+E  P    G  MAS+HPCR
Sbjct: 219 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCR 253


>gi|295674817|ref|XP_002797954.1| autophagy-related protein 3 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226280604|gb|EEH36170.1| autophagy-related protein 3 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 386

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N V+ T     E L PV   S FR TG +TPEEFV AGD+LV+  PTW W      +K 
Sbjct: 1   MNVVRSTLSTWRERLAPVSHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDASSLAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P    G  MAS+HPCRHA VMK +++
Sbjct: 213 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 263



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 3/37 (8%)

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           PAG   + G     RTY L+ITY  YY+TPRL+L GY
Sbjct: 174 PAG---KAGTDSPLRTYTLYITYSTYYRTPRLYLSGY 207



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQN 98
           V  YL++FLKF+ SV P IE+DFT  
Sbjct: 360 VDQYLVVFLKFIASVTPGIEHDFTMG 385


>gi|451850319|gb|EMD63621.1| hypothetical protein COCSADRAFT_92097 [Cochliobolus sativus ND90Pr]
          Length = 351

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 54/95 (56%), Gaps = 10/95 (10%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITKNVPCPRR 337
           S FRETG +TPEEFV AGD LV   P+WQWA     SK  SYLP  KQFL+T+ VPC RR
Sbjct: 24  STFRETGQITPEEFVLAGDFLVFKFPSWQWADASSPSKRVSYLPEGKQFLVTRGVPCHRR 83

Query: 338 CKQIDYCEEKQ--KII-------ENEQDEEGWVDT 363
                  E  Q   I+       E   D++GW+ T
Sbjct: 84  LDDNFAGEAGQDETIVRDGFTAGEGATDDDGWLRT 118



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL   +M ED+  DY  KTVT+E  P    P   AS+HPC+HA VMK +++
Sbjct: 206 PLKPQEMMEDIVGDYKDKTVTIEDFPFFENPLKTASVHPCKHASVMKVLLD 256



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           RTY L+ITY  +Y+TPRL+L GY 
Sbjct: 178 RTYTLYITYSAHYRTPRLYLSGYG 201


>gi|225678384|gb|EEH16668.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 385

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKA 316
           +N V+ T     E L PV   S FR TG +TPEEFV AGD+LV+  PTW W      +K 
Sbjct: 1   MNVVRSTLSTWRERLAPVSHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDASSLAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P    G  MAS+HPCRHA VMK +++
Sbjct: 213 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 263



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 185 RTYTLYITYSTYYRTPRLYLSGY 207



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCR 137
           M ED+  DY  KTVT+E  P    G  MAS+HPCR
Sbjct: 219 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCR 253


>gi|361128254|gb|EHL00200.1| putative Autophagy-related protein 3 [Glarea lozoyensis 74030]
          Length = 287

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 16/121 (13%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD-ESKA 316
           +N +  T   V E+  PV   S FR+ G +TPEEF+AAGD+LVH  P W WA    ESK 
Sbjct: 1   MNFIHSTLDKVREW-APVSHTSTFRQNGQITPEEFLAAGDYLVHKFPMWSWADASPESKR 59

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQ---IDYCEEKQKIIENE-----------QDEEGWVD 362
            +YLP  KQFL+ + VPC RR  +    D   ++  + + E            DE+GW+ 
Sbjct: 60  ANYLPAGKQFLVIRGVPCHRRLDENFAGDAGHDETMVGDGEDFKSLGGHSPGDDEDGWLR 119

Query: 363 T 363
           T
Sbjct: 120 T 120



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 19/27 (70%)

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           V  YL++FLKF+ SV P IEYDFT   
Sbjct: 261 VDQYLVVFLKFIASVTPGIEYDFTMGI 287


>gi|255710847|ref|XP_002551707.1| KLTH0A05720p [Lachancea thermotolerans]
 gi|238933084|emb|CAR21265.1| KLTH0A05720p [Lachancea thermotolerans CBS 6340]
          Length = 294

 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 5/93 (5%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA-KSYLPPNKQFLI 328
           EYLTPV   S F+ +G +TPEEF  AGD+L H  PTW+W S  +  + + +LP  KQFL+
Sbjct: 11  EYLTPVTHTSTFQSSGQITPEEFTQAGDYLCHMFPTWEWNSTSKDVSYRDFLPKEKQFLV 70

Query: 329 TKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
           T+ VPC  R +Q+   E      E   + +GWV
Sbjct: 71  TRKVPCSARAEQLTTVEGA----EEGDNADGWV 99



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 65/135 (48%), Gaps = 48/135 (35%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTME----SHPHLPGPPMASIHPCRHAEV 56
           +G N  G    +PLT +QM+ED+S DY  KT T+E     H H+      SIHPC+HA V
Sbjct: 165 VGFNGDG----SPLTPEQMFEDISPDYRTKTATIERLPFQHTHVTS---VSIHPCKHANV 217

Query: 57  MKKIIETV-----------------------------------LEGGGELGVHMYLIIFL 81
           M+ ++E +                                   +EGG  L V  YLI+FL
Sbjct: 218 MRVLMERIREVKQRKNASLANTTNPSSGRGKEGDEDWEDIQNDVEGG--LRVDQYLIVFL 275

Query: 82  KFVQSVIPTIEYDFT 96
           KFV SV P IE+D+T
Sbjct: 276 KFVSSVTPGIEHDYT 290


>gi|347826892|emb|CCD42589.1| similar to autophagy-related protein 3 [Botryotinia fuckeliana]
          Length = 363

 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD-ESKAKSYLPPNKQFLITK 330
            TPV   S FR  G +TPEEFVAAGD+LV   PTW WA     SK  +YLP  KQFL+T+
Sbjct: 14  FTPVSNTSTFRTNGQITPEEFVAAGDYLVFKFPTWSWADASPTSKRANYLPAGKQFLVTR 73

Query: 331 NVPCPRRC 338
            VPC RR 
Sbjct: 74  GVPCHRRL 81



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 8   VKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           + S  PL    M ED+  DY  KTVT+E  P+      MASIHPC+HA VMK +++
Sbjct: 203 LSSSQPLPPHLMMEDIVGDYKDKTVTLEDFPYFSNNIKMASIHPCKHASVMKTLLD 258



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 20/93 (21%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR--------------AIKSKASNQTQ 148
           M ED+  DY  KTVT+E  P+      MASIHPC+              A+K +   Q Q
Sbjct: 214 MMEDIVGDYKDKTVTLEDFPYFSNNIKMASIHPCKHASVMKTLLDRADAALKLRREKQRQ 273

Query: 149 SCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQ 181
               P S     D   E L ++DFE++   D++
Sbjct: 274 GKAVPGSK----DTGMEGL-VDDFEKTKIGDKK 301


>gi|154303818|ref|XP_001552315.1| hypothetical protein BC1G_08793 [Botryotinia fuckeliana B05.10]
 gi|166990597|sp|A6S8P6.1|ATG3_BOTFB RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
          Length = 347

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD-ESKAKSYLPPNKQFLITK 330
            TPV   S FR  G +TPEEFVAAGD+LV   PTW WA     SK  +YLP  KQFL+T+
Sbjct: 14  FTPVSNTSTFRTNGQITPEEFVAAGDYLVFKFPTWSWADASPTSKRANYLPAGKQFLVTR 73

Query: 331 NVPCPRRC 338
            VPC RR 
Sbjct: 74  GVPCHRRL 81



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 8   VKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           + S  PL    M ED+  DY  KTVT+E  P+      MASIHPC+HA VMK +++
Sbjct: 187 LSSSQPLPPHLMMEDIVGDYKDKTVTLEDFPYFSNNIKMASIHPCKHASVMKTLLD 242



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 20/93 (21%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR--------------AIKSKASNQTQ 148
           M ED+  DY  KTVT+E  P+      MASIHPC+              A+K +   Q Q
Sbjct: 198 MMEDIVGDYKDKTVTLEDFPYFSNNIKMASIHPCKHASVMKTLLDRADAALKLRREKQRQ 257

Query: 149 SCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQ 181
               P S     D   E L ++DFE++   D++
Sbjct: 258 GKAVPGSK----DTGMEGL-VDDFEKTKIGDKK 285


>gi|448520149|ref|XP_003868235.1| Atg3 protein [Candida orthopsilosis Co 90-125]
 gi|380352574|emb|CCG22801.1| Atg3 protein [Candida orthopsilosis]
          Length = 307

 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 51/75 (68%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW++  ++  KS+LPP KQ L
Sbjct: 9   LREYLTPINHNSNFLTTGEISPEEFVKAGDYLVYKFPTWQWSTCPKNLQKSFLPPEKQVL 68

Query: 328 ITKNVPCPRRCKQID 342
           +TK+VP   R    +
Sbjct: 69  VTKHVPSHVRASNFE 83



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 24/118 (20%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QMYED++ DY  KTVT+E+ P        SIHPC+H+ VMK +
Sbjct: 192 VGFDSNGI----PLLPKQMYEDINSDYKDKTVTIENLPVASNTTSISIHPCKHSSVMKVL 247

Query: 61  --------------------IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
                               IE +      + V  YL++FLKF+ SV P IEYD+T +
Sbjct: 248 MSHQLRKKEKPVEEDLSNLSIENIEPEAEGIRVDQYLVVFLKFIASVTPGIEYDYTMD 305



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQTQSCNKP 153
           QMYED++ DY  KTVT+E+ P        SIHPC+    +K   S+Q +   KP
Sbjct: 205 QMYEDINSDYKDKTVTIENLPVASNTTSISIHPCKHSSVMKVLMSHQLRKKEKP 258


>gi|241948071|ref|XP_002416758.1| autophagy-related E2-like conjugation enzyme, putative;
           autophagy-related protein [3], putative [Candida
           dubliniensis CD36]
 gi|223640096|emb|CAX44342.1| autophagy-related E2-like conjugation enzyme, putative [Candida
           dubliniensis CD36]
          Length = 333

 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKAKS 318
           S++     + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW +   ++  KS
Sbjct: 2   SLRSKLSSLREYLTPINHNSNFVTTGEISPEEFVKAGDYLVYKFPTWQWGTDCPKNLQKS 61

Query: 319 YLPPNKQFLITKNVPCPRRCKQIDYCEEKQ 348
           +LPP+KQ+L+T++VP  +R       E+K+
Sbjct: 62  FLPPDKQYLVTRHVPSYQRASNYLTGEDKK 91



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 44/136 (32%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QM+ED++ DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 198 VGFDSNGI----PLLPQQMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCKHSSVMKVL 253

Query: 61  I--------------ETVLEGGGELGVH--------------------------MYLIIF 80
           +              +++  G  +L V+                           YLIIF
Sbjct: 254 MKHSKLNKKNLQQKDDSLSNGLNKLSVNEKGTTKEENSQSHDNEEEDEEGIRVDHYLIIF 313

Query: 81  LKFVQSVIPTIEYDFT 96
           LKF+ SV P IEYD+T
Sbjct: 314 LKFIASVTPGIEYDYT 329



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR-AIKSKASNQTQSCNKPNSTEEEDD 161
           QM+ED++ DY  KT T+E+ P        SIHPC+ +   K   +    NK N  +++DD
Sbjct: 211 QMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCKHSSVMKVLMKHSKLNKKN-LQQKDD 269

Query: 162 DDEEALDMEDFEESGFLDEQD 182
                L+     E G   E++
Sbjct: 270 SLSNGLNKLSVNEKGTTKEEN 290


>gi|354544230|emb|CCE40953.1| hypothetical protein CPAR2_109910 [Candida parapsilosis]
          Length = 310

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 49/75 (65%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW+   +   KS+LPP+KQ 
Sbjct: 8   SLREYLTPINHNSNFLTTGEISPEEFVQAGDYLVYKFPTWQWSRCPDKLQKSFLPPDKQV 67

Query: 327 LITKNVPCPRRCKQI 341
           L+TK+VP   R    
Sbjct: 68  LVTKHVPSRVRASNF 82



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 24/118 (20%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QMYED+S DY  KTVT+E+ P        SIHPC+H+ VMK +
Sbjct: 195 VGFDSNGI----PLLPKQMYEDISADYKDKTVTIENLPVASNTTSVSIHPCKHSSVMKVL 250

Query: 61  --------------------IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
                               IE +      + V  YL++FLKFV SVIP IEYD+T +
Sbjct: 251 MSHQRKKKETQVEKDLSNLSIENIEPEAEGIRVDQYLVVFLKFVASVIPGIEYDYTMD 308



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QMYED+S DY  KTVT+E+ P        SIHPC+
Sbjct: 208 QMYEDISADYKDKTVTIENLPVASNTTSVSIHPCK 242


>gi|68473967|ref|XP_718880.1| potential E2-like lipid conjugating enzyme Atg3 [Candida albicans
           SC5314]
 gi|46440673|gb|EAK99976.1| potential E2-like lipid conjugating enzyme Atg3 [Candida albicans
           SC5314]
          Length = 333

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKAKS 318
           S++     + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW +   ++  KS
Sbjct: 2   SLRSKLSSLREYLTPINHNSNFVTTGEISPEEFVKAGDYLVYKFPTWQWGNDCPKNLQKS 61

Query: 319 YLPPNKQFLITKNVPCPRRCKQIDYCEEKQ 348
           +LPP+KQ+L+T++VP  +R       E+K+
Sbjct: 62  FLPPDKQYLVTRHVPSYQRASNYLTGEDKK 91



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 44/136 (32%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QM+ED++ DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 198 VGFDSNGI----PLLPQQMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCKHSSVMKVL 253

Query: 61  I--------------ETVLEGGGELGVH--------------------------MYLIIF 80
           +              E++ +   +L V+                           YLIIF
Sbjct: 254 MKHSKLNKKNLQQKDESLSDDLSKLSVNEKKTQDEHSQINNDDKEEEEEGIRGDHYLIIF 313

Query: 81  LKFVQSVIPTIEYDFT 96
           LKF+ S  P +EY++T
Sbjct: 314 LKFIASDTPGMEYEYT 329



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QM+ED++ DY  KT T+E+ P        SIHPC+
Sbjct: 211 QMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCK 245


>gi|68473758|ref|XP_718982.1| potential E2-like lipid conjugating enzyme Atg3 [Candida albicans
           SC5314]
 gi|71152282|sp|Q5ABQ7.1|ATG3_CANAL RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|46440779|gb|EAL00081.1| potential E2-like lipid conjugating enzyme Atg3 [Candida albicans
           SC5314]
          Length = 333

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKAKS 318
           S++     + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW +   ++  KS
Sbjct: 2   SLRSKLSSLREYLTPINHNSNFVTTGEISPEEFVKAGDYLVYKFPTWQWGNDCPKNLQKS 61

Query: 319 YLPPNKQFLITKNVPCPRRCKQIDYCEEKQ 348
           +LPP+KQ+L+T++VP  +R       E+K+
Sbjct: 62  FLPPDKQYLVTRHVPSYQRASNYLTGEDKK 91



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 44/136 (32%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QM+ED++ DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 198 VGFDSNGI----PLLPQQMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCKHSSVMKVL 253

Query: 61  I--------------ETVLEGGGELGVH--------------------------MYLIIF 80
           +              E++ +   +L V+                           YLIIF
Sbjct: 254 MKHSKLNKKNLQQKDESLSDDLSKLSVNEKKTQDEHSQINNDDKEEEEEGIRVDHYLIIF 313

Query: 81  LKFVQSVIPTIEYDFT 96
           LKF+ SV P IEYD+T
Sbjct: 314 LKFIASVTPGIEYDYT 329



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QM+ED++ DY  KT T+E+ P        SIHPC+
Sbjct: 211 QMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCK 245


>gi|238879413|gb|EEQ43051.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 334

 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKAKS 318
           S++     + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQW +   ++  KS
Sbjct: 2   SLRSKLSSLREYLTPINHNSNFVTTGEISPEEFVKAGDYLVYKFPTWQWGNDCPKNLQKS 61

Query: 319 YLPPNKQFLITKNVPCPRRCKQIDYCEEKQ 348
           +LPP+KQ+L+T++VP  +R       E+K+
Sbjct: 62  FLPPDKQYLVTRHVPSYQRASNYLTGEDKK 91



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 43/135 (31%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QM+ED++ DY  KT T+E+ P        SIHPC+H+ VMK +
Sbjct: 200 VGFDSNGI----PLLPQQMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCKHSSVMKVL 255

Query: 61  I--------------ETVLEGGGELGVH-------------------------MYLIIFL 81
           +              E++ +   +L V+                          YLIIFL
Sbjct: 256 MKHSKLNKKNLQQKDESLSDDLSKLSVNEKKTQDEYSQIDNDNKEEEEGIRVDHYLIIFL 315

Query: 82  KFVQSVIPTIEYDFT 96
           KF+ SV P IEYD+T
Sbjct: 316 KFIASVTPGIEYDYT 330



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QM+ED++ DY  KT T+E+ P        SIHPC+
Sbjct: 213 QMFEDINSDYKDKTATIENLPVAHNTTSVSIHPCK 247


>gi|344304510|gb|EGW34742.1| hypothetical protein SPAPADRAFT_57808 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 267

 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 51/72 (70%)

Query: 267 GVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQF 326
            + EYLTP+  +S F  TG ++PEEFV AGD+LV   PTW+W+S  ++  KS+LP  KQF
Sbjct: 8   SLREYLTPINHKSNFSTTGEISPEEFVEAGDYLVFKFPTWRWSSCPKNLQKSFLPEEKQF 67

Query: 327 LITKNVPCPRRC 338
           LITK+VP  +R 
Sbjct: 68  LITKHVPSYQRA 79



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL   QM+ED++ DY  KT T+E+ P        SIHPCRHA VMK +
Sbjct: 199 VGFDSNGI----PLLPKQMFEDINSDYVDKTATIENLPVAHNTTSVSIHPCRHASVMKVL 254

Query: 61  IE 62
           ++
Sbjct: 255 MK 256



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QM+ED++ DY  KT T+E+ P        SIHPCR
Sbjct: 212 QMFEDINSDYVDKTATIENLPVAHNTTSVSIHPCR 246


>gi|50310697|ref|XP_455370.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|62899742|sp|Q6CL19.1|ATG3_KLULA RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|49644506|emb|CAG98078.1| KLLA0F06402p [Kluyveromyces lactis]
          Length = 302

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA--KS 318
           ++ T     EYLTP+   S F  +G +TPEEFV AGD+LVH  PTW+W   D      K 
Sbjct: 2   LRSTLSNWREYLTPISHTSTFETSGQLTPEEFVKAGDYLVHMFPTWKWNGNDFQNVHHKD 61

Query: 319 YLPPNKQFLITKNVPCPRRCKQ 340
           +LP +KQFL+TK VPC  R   
Sbjct: 62  FLPNDKQFLVTKKVPCKLRANN 83



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 28/119 (23%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKKI 60
           G +N G     PL+ DQM+ED++ DY  KT T+E  P L G  ++ SIHPC+HA VMK +
Sbjct: 184 GYDNDG----TPLSPDQMFEDIAADYRSKTATIEPLPFLKGNNISVSIHPCKHANVMKVL 239

Query: 61  IETVLEGGGE-----------------------LGVHMYLIIFLKFVQSVIPTIEYDFT 96
           +E V                             L V  YL++FLKF+ SV P IE+D+T
Sbjct: 240 MEKVRSSRSRARKVDPQTTDEDWEDLQSDVDDGLRVDQYLVVFLKFITSVTPGIEHDYT 298



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 9/76 (11%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRAI--------KSKASNQTQSCNK 152
           DQM+ED++ DY  KT T+E  P L G  ++ SIHPC+          K ++S        
Sbjct: 195 DQMFEDIAADYRSKTATIEPLPFLKGNNISVSIHPCKHANVMKVLMEKVRSSRSRARKVD 254

Query: 153 PNSTEEEDDDDEEALD 168
           P +T+E+ +D +  +D
Sbjct: 255 PQTTDEDWEDLQSDVD 270


>gi|389582897|dbj|GAB65633.1| autophagocytosis associated protein C-terminal domain containing
           protein, partial [Plasmodium cynomolgi strain B]
          Length = 268

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL  ++++ED+S +Y+ +TVT + HP   G   ASIHPCRH E M  I++  +  G E  
Sbjct: 176 PLKSEEIFEDISAEYSYETVTYDPHP-CTGVMTASIHPCRHGEAMLNIVKNWMSEGKEPR 234

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQN 98
             +YL+  LKFV  VIPTIEYDFT +
Sbjct: 235 HDLYLLFLLKFVSGVIPTIEYDFTTD 260



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 22/117 (18%)

Query: 124 HLPGPPMASIHPCRAIKSKASNQTQSCNKPNSTEEEDDDDEEALDMEDFEESGFLDEQDP 183
           HL  PP ++      ++ KA NQ       +S EE+D    EA+D+ +F+        DP
Sbjct: 76  HLEPPPRSA-----PLQEKAHNQHD-----DSVEEDD----EAIDINNFDA-----HFDP 116

Query: 184 SIANIPPEKQSPSSPAGDSQECG---DIVRTRTYDLHITYDKYYQTPRLWLYGYNER 237
           +   I  +  +    AG     G   ++++ RTYD+ ITYDKYY+TPR+WL+GY+E 
Sbjct: 117 NFDLIKEDDPAALDHAGLYSYSGQNDNVMKIRTYDVSITYDKYYETPRIWLFGYDEN 173


>gi|189206742|ref|XP_001939705.1| autophagocytosis protein [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975798|gb|EDU42424.1| autophagocytosis protein [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 351

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 10/95 (10%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITKNVPCPRR 337
           S FRETG +TPEEFV AGD LV   P+WQWA     +K  SYLP  KQFL+T+ VPC RR
Sbjct: 24  STFRETGQITPEEFVLAGDFLVFKFPSWQWADASSPAKRVSYLPEGKQFLVTRGVPCHRR 83

Query: 338 CKQIDYCEEKQ--KII-------ENEQDEEGWVDT 363
                  E  Q   I+       E   D++GW+ T
Sbjct: 84  LDDNFAGEAGQDETIVRDGFTAGEGATDDDGWLRT 118



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL   +M ED+  DY  KTVT+E  P    P   AS+HPC+HA VMK +++
Sbjct: 206 PLKPQEMMEDIVGDYKDKTVTIEDFPFFENPLKTASVHPCKHASVMKVLLD 256



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 62  ETVLEGGGE---LGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
           E + EGG +   + V  YL++FLKF+ SV P IE+DFT  
Sbjct: 311 EVLSEGGDDEVAIRVDQYLVVFLKFMASVTPGIEHDFTMG 350



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           RTY L+ITY  +Y+TPRL+L GY 
Sbjct: 178 RTYTLYITYSAHYRTPRLYLSGYG 201


>gi|308805414|ref|XP_003080019.1| Protein involved in autophagocytosis during starvation (ISS)
          [Ostreococcus tauri]
 gi|116058478|emb|CAL53667.1| Protein involved in autophagocytosis during starvation (ISS)
          [Ostreococcus tauri]
          Length = 81

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 57/75 (76%), Gaps = 2/75 (2%)

Query: 23 VSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV-LEGGGELGVHMYLIIFL 81
          +S ++A+KTVT++ HPH  G P ASIHPC+H+ VMKK++E++  E G    V  Y+ +FL
Sbjct: 7  LSAEHAQKTVTIDPHPHT-GVPSASIHPCKHSSVMKKLVESMRAERGESPSVETYMFVFL 65

Query: 82 KFVQSVIPTIEYDFT 96
          KF+ SVIPT+EYD+T
Sbjct: 66 KFIASVIPTVEYDYT 80


>gi|239610048|gb|EEQ87035.1| autophagocytosis protein Aut1 [Ajellomyces dermatitidis ER-3]
          Length = 377

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKA 316
           +N V+ T     + L P+   S FR TG +TPEEFV AGD+LV+  PTW W  +   +K 
Sbjct: 1   MNVVRSTLSTWRDRLAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDAASPAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 212 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 262



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRAI--------KSKASNQTQSCNKPN 154
           M ED+  DY  KTVT+E  P   G   MAS+HPCR          ++ A+ + +     N
Sbjct: 218 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLDRADAALKLRRQKLKN 277

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSP 195
           +T  ED        +E   E G +D  D +   I PE+Q P
Sbjct: 278 ATSVEDARRNVPSKVESGLE-GLVD--DTARLTISPEQQQP 315



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 184 RTYTLYITYSPYYRTPRLYLSGY 206



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 7/40 (17%)

Query: 66  EGGGE-------LGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
           EGG E       + V  YL++FLKF+ SV P IE+DFT  
Sbjct: 337 EGGEEYEEQRVAIRVDQYLVVFLKFIASVTPGIEHDFTMG 376


>gi|261198553|ref|XP_002625678.1| autophagocytosis protein Aut1 [Ajellomyces dermatitidis SLH14081]
 gi|239594830|gb|EEQ77411.1| autophagocytosis protein Aut1 [Ajellomyces dermatitidis SLH14081]
          Length = 365

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKA 316
           +N V+ T     + L P+   S FR TG +TPEEFV AGD+LV+  PTW W  +   +K 
Sbjct: 1   MNVVRSTLSTWRDRLAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDAASPAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 200 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 250



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRAI--------KSKASNQTQSCNKPN 154
           M ED+  DY  KTVT+E  P   G   MAS+HPCR          ++ A+ + +     N
Sbjct: 206 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLDRADAALKLRRQKLKN 265

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSP 195
           +T  ED        +E   E G +D  D +   I PE+Q P
Sbjct: 266 ATSVEDARRNVPSKVESGLE-GLVD--DTARLTISPEQQQP 303



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 7/40 (17%)

Query: 66  EGGGE-------LGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
           EGG E       + V  YL++FLKF+ SV P IE+DFT  
Sbjct: 325 EGGEEYEEQRVAMRVDQYLVVFLKFIASVTPGIEHDFTMG 364


>gi|327350972|gb|EGE79829.1| autophagocytosis protein Aut1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 377

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKA 316
           +N V+ T     + L P+   S FR TG +TPEEFV AGD+LV+  PTW W  +   +K 
Sbjct: 1   MNVVRSTLSTWRDRLAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDAASPAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 212 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 262



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRAI--------KSKASNQTQSCNKPN 154
           M ED+  DY  KTVT+E  P   G   MAS+HPCR          ++ A+ + +     N
Sbjct: 218 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLDRADAALKLRRQKLKN 277

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSP 195
           +T  ED        +E   E G +D  D +   I PE+Q P
Sbjct: 278 ATSVEDAKRNVPSKVESGLE-GLVD--DTARLTISPEQQQP 315



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 184 RTYTLYITYSPYYRTPRLYLSGY 206



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 7/40 (17%)

Query: 66  EGGGE-------LGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
           EGG E       + V  YL++FLKF+ SV P IE+DFT  
Sbjct: 337 EGGEEYEEQRVAIRVDQYLVVFLKFIASVTPGIEHDFTMG 376


>gi|330919132|ref|XP_003298486.1| hypothetical protein PTT_09229 [Pyrenophora teres f. teres 0-1]
 gi|311328281|gb|EFQ93420.1| hypothetical protein PTT_09229 [Pyrenophora teres f. teres 0-1]
          Length = 351

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 10/95 (10%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITKNVPCPRR 337
           S FRETG +TPEEFV AGD LV   P+WQWA     +K  SYLP  KQFL+T+ VPC RR
Sbjct: 24  STFRETGQITPEEFVLAGDFLVFKFPSWQWADASSPAKRVSYLPEGKQFLVTRGVPCHRR 83

Query: 338 CKQIDYCEEKQ--KII-------ENEQDEEGWVDT 363
                  E  Q   I+       E   D++GW+ T
Sbjct: 84  LDDNFAGEAGQDETIVRDGFTAGEGATDDDGWLRT 118



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL   +M ED+  DY  KTVT+E  P    P   AS+HPC+HA VMK +++
Sbjct: 206 PLKPQEMMEDIVGDYKDKTVTIEDFPFFENPLKTASVHPCKHASVMKVLLD 256



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 51  CRHAEVMKKIIETVLEGGGE---LGVHMYLIIFLKFVQSVIPTIEYDFTQN 98
            +  E  K   E + EGG +   + V  YL++FLKF+ SV P IE+DFT  
Sbjct: 300 AKDGEEAKDDWEVLSEGGDDEVAIRVDQYLVVFLKFMASVTPGIEHDFTMG 350



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           RTY L+ITY  +Y+TPRL+L GY 
Sbjct: 178 RTYTLYITYSAHYRTPRLYLSGYG 201


>gi|407925319|gb|EKG18332.1| Autophagy-related protein 3 [Macrophomina phaseolina MS6]
          Length = 357

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 8/88 (9%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N ++S +N+++ T         P+   S FR TG +TPEEFVAAGD LV+  P+W W+  
Sbjct: 2   NYLRSTLNTLRDT-------YAPISHTSTFRATGQITPEEFVAAGDFLVYKFPSWSWSDA 54

Query: 312 DE-SKAKSYLPPNKQFLITKNVPCPRRC 338
              SK  +YLP  KQFL+T+ VPC RR 
Sbjct: 55  SHPSKRVNYLPEGKQFLVTRGVPCHRRL 82



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P    G  MAS+HPC+HA VMK +++
Sbjct: 209 PLPPHLMMEDIVGDYKDKTVTLEDFPFFDAGIKMASVHPCKHASVMKVLLD 259



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 181 RTYTLYITYTPYYRTPRLYLSGY 203



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCR 137
           M ED+  DY  KTVT+E  P    G  MAS+HPC+
Sbjct: 215 MMEDIVGDYKDKTVTLEDFPFFDAGIKMASVHPCK 249


>gi|396479751|ref|XP_003840830.1| similar to TPA: Autophagy-related protein 3 (Autophagy-related
           E2-like conjugation enzyme atg3) [Leptosphaeria maculans
           JN3]
 gi|312217403|emb|CBX97351.1| similar to TPA: Autophagy-related protein 3 (Autophagy-related
           E2-like conjugation enzyme atg3) [Leptosphaeria maculans
           JN3]
          Length = 351

 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 10/95 (10%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE-SKAKSYLPPNKQFLITKNVPCPRR 337
           S FRETG +TPEEFV AGD LV   P+WQWA     +K  +YLP  KQFL+T+ VPC RR
Sbjct: 24  STFRETGQITPEEFVLAGDFLVFKFPSWQWADASSPAKRVAYLPEGKQFLVTRGVPCHRR 83

Query: 338 CKQIDYCEEKQ--KII-------ENEQDEEGWVDT 363
                  E  Q   I+       E   D++GW+ T
Sbjct: 84  LDDNFAGEAGQDETIVRDGFAAGEGATDDDGWLRT 118



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 58/145 (40%), Gaps = 59/145 (40%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKI----------- 60
           PL   +M ED+  DY  KTVT+E  P        AS+HPC+HA VMK +           
Sbjct: 206 PLKPQEMMEDIVGDYKDKTVTIEDFPFFEHALKTASVHPCKHASVMKVLLDRADAALKLR 265

Query: 61  ------------IETVLEG-------------------------------GGE----LGV 73
                       I++ +EG                               GG+    + V
Sbjct: 266 LTKLKAGKDVSKIDSGMEGLVDDTRLLKLTEQSKNKDGDEGKDDWEVLSEGGDDKVAIRV 325

Query: 74  HMYLIIFLKFVQSVIPTIEYDFTQN 98
             YL++FLKF+ SV P IE+DFT  
Sbjct: 326 DQYLVVFLKFMASVTPGIEHDFTMG 350



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           RTY L+ITY  +Y+TPRL+L GY 
Sbjct: 178 RTYTLYITYSAHYRTPRLYLSGYG 201


>gi|401623806|gb|EJS41890.1| atg3p [Saccharomyces arboricola H-6]
          Length = 310

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 3/82 (3%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW--ASGDESKAKS 318
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+L H  PTW+W   S D S  + 
Sbjct: 2   IRSTLSSWREYLTPITHKSTFLNTGQITPEEFVQAGDYLCHMFPTWKWNEESSDVS-YRD 60

Query: 319 YLPPNKQFLITKNVPCPRRCKQ 340
           +LP +KQFL+ + VPC +R +Q
Sbjct: 61  FLPKSKQFLVIRKVPCDKRAEQ 82



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 32/124 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G N  G    +PLT ++M+ED+S DY  KT T+E  P      ++ SIHPC+HA VMK 
Sbjct: 187 VGFNANG----SPLTPEEMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKI 242

Query: 60  IIETV----------------LEGGGE-----------LGVHMYLIIFLKFVQSVIPTIE 92
           +++ V                L+G G+           L V  YLI+FLKF+ SV P+I+
Sbjct: 243 LLDKVRMVRQRRRKEQQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTPSIQ 302

Query: 93  YDFT 96
           +D+T
Sbjct: 303 HDYT 306


>gi|171676127|ref|XP_001903017.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936129|emb|CAP60789.1| unnamed protein product [Podospora anserina S mat+]
          Length = 337

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 14/118 (11%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N + S +NS++       +  TP    S FR+TG +TPEEF+AAGD+LV+  PTW W+  
Sbjct: 2   NILYSTVNSLR-------DRYTPASHTSTFRKTGEITPEEFIAAGDYLVYKFPTWSWSDA 54

Query: 312 DESKAK-SYLPPNKQFLITKNVPCPRRCKQIDYCEE---KQKIIENEQ--DEEGWVDT 363
           +    + S LP  KQ+L+T++VPC RR    D+  +   ++ ++E  +  D++GW+ T
Sbjct: 55  ETPDQRVSQLPAGKQYLVTRHVPCNRRFDS-DFAGDAGHEEAVVEGGKSSDDDGWLRT 111



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 55/138 (39%), Gaps = 51/138 (36%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETV------- 64
           PL    M ED++ DY  KTVT+E+ P       MAS+HPC+HA VMK +++         
Sbjct: 200 PLPPHLMMEDIAGDYKDKTVTLENFPFFAHQVKMASVHPCKHAPVMKTLLDRADAALKLR 259

Query: 65  ----------------------------LEGGGE---------------LGVHMYLIIFL 81
                                       L  G E               + V  YL++FL
Sbjct: 260 REKQKAAAAKAGSSGGVGSLASQVKDLNLGSGAENDEWEEIDAADQEVAIRVDQYLVVFL 319

Query: 82  KFVQSVIPTIEYDFTQNF 99
           KF+ SV P IE+D T   
Sbjct: 320 KFIASVTPGIEHDNTMGI 337



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 201 DSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           D+   G     RTY L+I Y  YY+TPR++L GY
Sbjct: 161 DASAGGQNSGKRTYSLYIVYSPYYRTPRMYLSGY 194


>gi|414145780|pdb|4GSL|C Chain C, Crystal Structure Of An Atg7-Atg3 Crosslinked Complex
 gi|414145781|pdb|4GSL|D Chain D, Crystal Structure Of An Atg7-Atg3 Crosslinked Complex
          Length = 312

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 5/83 (6%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSY- 319
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+L H  PTW+W   +ES   SY 
Sbjct: 4   IRSTLSSWREYLTPITHKSTFLTTGQITPEEFVQAGDYLAHMFPTWKW--NEESSDISYR 61

Query: 320 --LPPNKQFLITKNVPCPRRCKQ 340
             LP NKQFLI + VP  +R +Q
Sbjct: 62  DFLPKNKQFLIIRKVPADKRAEQ 84



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 32/124 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G N+ G    +PL+ +QM+ED+S DY  KT T+E  P      ++ SIHPC+HA VMK 
Sbjct: 189 VGFNSNG----SPLSPEQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKI 244

Query: 60  II----------------ETVLEGGGE-----------LGVHMYLIIFLKFVQSVIPTIE 92
           ++                E  L+G G+           L V  YLI+FLKF+ SV P+I+
Sbjct: 245 LLDKVRVVRQRRRKELQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTPSIQ 304

Query: 93  YDFT 96
           +D+T
Sbjct: 305 HDYT 308



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCR 137
           +QM+ED+S DY  KT T+E  P      ++ SIHPC+
Sbjct: 201 EQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCK 237


>gi|255730335|ref|XP_002550092.1| hypothetical protein CTRG_04389 [Candida tropicalis MYA-3404]
 gi|240132049|gb|EER31607.1| hypothetical protein CTRG_04389 [Candida tropicalis MYA-3404]
          Length = 307

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA-KS 318
           S++     + EYLTP+   S F  TG ++PEEF+ AGD+LV+  PTW+W+S  + +  KS
Sbjct: 3   SIRSKISSLREYLTPINHNSNFSTTGEISPEEFIKAGDYLVYKFPTWEWSSCPKKELEKS 62

Query: 319 YLPPNKQFLITKNVPCPRRC 338
           +LP +KQFLIT++VP  +R 
Sbjct: 63  FLPSDKQFLITRHVPSYQRA 82



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 30/124 (24%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
           +G ++ G+    PL  +QM+ED++ DY  KT T+E  P        SIHPC+H+ VMK +
Sbjct: 186 VGFDSNGI----PLLPNQMFEDINSDYKDKTATIEKLPVGINTTSVSIHPCKHSSVMKVL 241

Query: 61  I-------ETVLEGGGELG-------------------VHMYLIIFLKFVQSVIPTIEYD 94
           +       E + E    L                    V  YLIIFLKF+ SV P IEYD
Sbjct: 242 MKHSKLKKEDINEDIKNLSIDDKKKQDVDSDSEQDGIRVDQYLIIFLKFIASVTPGIEYD 301

Query: 95  FTQN 98
           +T +
Sbjct: 302 YTMD 305


>gi|225557899|gb|EEH06184.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 378

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKA 316
           +N V+ T     + L P+   S FR TG +TPEEFV AGD+LV+  PTW W      +K 
Sbjct: 1   MNVVRSTLSTWRDRLAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDAVSPAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P    G  MAS+HPCRHA VMK +++
Sbjct: 212 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 262



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCR 137
           M ED+  DY  KTVT+E  P    G  MAS+HPCR
Sbjct: 218 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCR 252



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 184 RTYTLYITYSPYYRTPRLYLSGY 206


>gi|149243827|ref|XP_001526534.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|166990598|sp|A5DVH6.1|ATG3_LODEL RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|146448928|gb|EDK43184.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 362

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 58/89 (65%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           + EYLTP+   S F  TG ++PEEFV AGD+LV+  PTWQWAS  +   K +LP +KQ L
Sbjct: 9   LREYLTPINHNSNFLTTGEISPEEFVKAGDYLVYKFPTWQWASCPKDLQKLFLPTDKQVL 68

Query: 328 ITKNVPCPRRCKQIDYCEEKQKIIENEQD 356
           +T++VP  +R  +    E + +I E ++D
Sbjct: 69  VTRHVPSHQRANEYFEGEFEVEIDEKDRD 97



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 57/131 (43%), Gaps = 45/131 (34%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII---------ET 63
           PL   QM+ED++ DY  KT T+E  P        SIHPC+H+ VM+ ++         E 
Sbjct: 230 PLLPQQMFEDINSDYKDKTATIEQLPVAHNTTSVSIHPCKHSSVMRVLMKHQRARREHEN 289

Query: 64  VLE------------------------GGGELG------------VHMYLIIFLKFVQSV 87
           V E                        G  EL             V +YL+IFLKF+ SV
Sbjct: 290 VAENMKRLSIGSEDHKEAMNHIRRLSAGSKELAQKQEEPNDSEIKVDLYLVIFLKFIASV 349

Query: 88  IPTIEYDFTQN 98
            P IEYD+T +
Sbjct: 350 TPGIEYDYTMD 360



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 103 QMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           QM+ED++ DY  KT T+E  P        SIHPC+
Sbjct: 235 QMFEDINSDYKDKTATIEQLPVAHNTTSVSIHPCK 269


>gi|325095624|gb|EGC48934.1| autophagocytosis protein Aut1 [Ajellomyces capsulatus H88]
          Length = 378

 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKA 316
           +N V+ T     + L P+   S FR TG +TPEEFV AGD+LV+  PTW W      +K 
Sbjct: 1   MNVVRSTLSTWRDRLAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDAVSPAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 212 PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 262



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 184 RTYTLYITYSPYYRTPRLYLSGY 206



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCR 137
           M ED+  DY  KTVT+E  P    G  MAS+HPCR
Sbjct: 218 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCR 252


>gi|240273990|gb|EER37508.1| autophagocytosis protein Aut1 [Ajellomyces capsulatus H143]
          Length = 242

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG-DESKA 316
           +N V+ T     + L P+   S FR TG +TPEEFV AGD+LV+  PTW W      +K 
Sbjct: 1   MNVVRSTLSTWRDRLAPISHTSTFRSTGQITPEEFVLAGDYLVYKFPTWSWEDAVSPAKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRC 338
             +LPP KQFL+T+ VPC RR 
Sbjct: 61  APHLPPGKQFLVTRGVPCHRRL 82



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 184 RTYTLYITYSPYYRTPRLYLSGY 206


>gi|367009506|ref|XP_003679254.1| hypothetical protein TDEL_0A07110 [Torulaspora delbrueckii]
 gi|359746911|emb|CCE90043.1| hypothetical protein TDEL_0A07110 [Torulaspora delbrueckii]
          Length = 305

 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS-GDESKAKSY 319
           ++ T     EYLTPV  +S F  TG +TP+EFV AGD++ H  PTW W     +   + +
Sbjct: 2   IRSTLSSWREYLTPVSHKSTFLSTGQITPDEFVEAGDYMCHMFPTWSWNEPTSDVSYRDF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQIDYCEEKQ 348
           LP  KQFLI++ VPC +R +Q    +EK+
Sbjct: 62  LPKGKQFLISRKVPCGQRAQQYVNVDEKE 90



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 28/112 (25%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKKII---------- 61
           PLT ++M+ED++ DY  KT T+E  P    P ++ SIHPC+HA VMK ++          
Sbjct: 190 PLTAEEMFEDIAPDYRTKTATIEKLPFYKTPIVSVSIHPCKHANVMKILLDKVRIVKRRR 249

Query: 62  ---------ETVLEGGGEL--------GVHMYLIIFLKFVQSVIPTIEYDFT 96
                    ETV +   +L         V  YL+IFLKF+ SV P+IE+D+T
Sbjct: 250 REEQQQQDGETVADDWEDLQADVDDSLRVDQYLVIFLKFITSVTPSIEHDYT 301



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCR 137
            T ++M+ED++ DY  KT T+E  P    P ++ SIHPC+
Sbjct: 191 LTAEEMFEDIAPDYRTKTATIEKLPFYKTPIVSVSIHPCK 230


>gi|378732726|gb|EHY59185.1| autophagy-like protein 3 [Exophiala dermatitidis NIH/UT8656]
          Length = 372

 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 8/91 (8%)

Query: 251 CNRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA- 309
            N + S ++ V+       +   P+   S FR TG +TPEEF+ AGD+LV+  P+W W+ 
Sbjct: 1   MNLLHSALDKVR-------DRYAPIKHTSTFRSTGQITPEEFILAGDYLVYKFPSWSWSD 53

Query: 310 SGDESKAKSYLPPNKQFLITKNVPCPRRCKQ 340
           +   ++  +YLPP KQFL+T+ VPC RR  +
Sbjct: 54  AASPARRVNYLPPEKQFLVTRGVPCHRRLDE 84



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHL-PGPPMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P       MASIHPC+HA VMK +++
Sbjct: 210 PLPPHLMMEDIVGDYKDKTVTLEDFPFFDTSVKMASIHPCKHASVMKILLD 260



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPR++L GY
Sbjct: 182 RTYTLYITYTPYYRTPRMYLSGY 204


>gi|453085389|gb|EMF13432.1| Autophagy_C-domain-containing protein [Mycosphaerella populorum
           SO2202]
          Length = 361

 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 11/94 (11%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S FR TG +TP+EF+++GD LVH  P+W WA    S+  SY P  KQ+L+T+ VPC +R 
Sbjct: 23  SDFRSTGQLTPDEFLSSGDFLVHRFPSWSWADAPPSQRVSYFPAGKQYLVTRGVPCRKRI 82

Query: 339 KQIDYC---EEKQKII--------ENEQDEEGWV 361
           K  D+     E Q ++        E   +++GW+
Sbjct: 83  KADDFAGKDNEDQLVLDMLKETGEEVSGEDDGWL 116



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPM--ASIHPCRHAEVMKKIIE 62
           S  PL    M +D+  DY  KTVT+E    +  PP+  AS+HPC+HA VMK +++
Sbjct: 210 SLQPLQPLAMMDDIVGDYKDKTVTLEDFTFV-DPPIKTASVHPCKHASVMKVLLD 263



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNERFKGKENLVLI 247
           RTY L+ITY  YY+TPRL+L GY+   +  + L ++
Sbjct: 185 RTYTLYITYSPYYRTPRLFLQGYSSSLQPLQPLAMM 220


>gi|449302878|gb|EMC98886.1| hypothetical protein BAUCODRAFT_137116 [Baudoinia compniacensis
           UAMH 10762]
          Length = 369

 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 1/73 (1%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQF 326
           + +   P+  +S FR+TG +TPEEF AAGD LV+  P+W WA +    +   Y PP KQ+
Sbjct: 12  LRDRFAPLTHQSTFRQTGQITPEEFQAAGDFLVYKFPSWSWADAATPDRRVPYFPPGKQY 71

Query: 327 LITKNVPCPRRCK 339
           LIT+ VPC RR K
Sbjct: 72  LITRGVPCRRRVK 84



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPM--ASIHPCRHAEVMKKIIE 62
           S  PL    M ED+  DY  KTVT+E   +   PP+  AS+HPC+HA VMK +++
Sbjct: 211 SNQPLPPMSMMEDIIGDYKDKTVTLEDF-YFTNPPIKTASVHPCKHASVMKVLLD 264



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/24 (66%), Positives = 20/24 (83%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           RTY L+ITY  YY+TPRL+L GY+
Sbjct: 185 RTYTLYITYTPYYRTPRLYLLGYD 208


>gi|401883679|gb|EJT47875.1| autophagy-related protein [Trichosporon asahii var. asahii CBS
           2479]
          Length = 321

 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 12/77 (15%)

Query: 267 GVAEYLTPVLKESKFRETGVVTP------------EEFVAAGDHLVHHCPTWQWASGDES 314
            V +YL+PVL+ESKF+E G +TP            EEFVAAGD L    P WQW  GD  
Sbjct: 12  AVRDYLSPVLRESKFKEHGRITPGELHHHYQADRAEEFVAAGDFLTFKFPVWQWEKGDPG 71

Query: 315 KAKSYLPPNKQFLITKN 331
           +A+ +LP +KQ+LIT+N
Sbjct: 72  RARDFLPADKQYLITRN 88



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           + PLTV ++++DV  D+A KT+TME+ PH  G  +AS+HPC+HA VMKK I+ + E   E
Sbjct: 182 KKPLTVKEIFQDVPADHAFKTMTMEAFPH-SGTQLASVHPCKHASVMKKFIDRMEESTAE 240

Query: 71  L 71
           +
Sbjct: 241 V 241



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 28/33 (84%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           ++++ RTYD +I+YDK+YQTPR WL+GY+E  K
Sbjct: 151 NLLQVRTYDCYISYDKHYQTPRFWLFGYDEHKK 183



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV ++++DV  D+A KT+TME+ PH  G  +AS+HPC+
Sbjct: 185 LTVKEIFQDVPADHAFKTMTMEAFPH-SGTQLASVHPCK 222


>gi|452843396|gb|EME45331.1| hypothetical protein DOTSEDRAFT_71154 [Dothistroma septosporum
           NZE10]
          Length = 357

 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQF 326
           + +   P+   S FR TG +TPEEF AAGD LVH  P+W WA +   S+  SY P  KQ+
Sbjct: 12  LRDRFAPINNISNFRATGQITPEEFQAAGDFLVHKFPSWSWADAASPSQRVSYFPDRKQY 71

Query: 327 LITKNVPCPRRCKQIDYC 344
           L+T+ VPC +R K  D+ 
Sbjct: 72  LVTRGVPCRKRIKADDFA 89



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPM--ASIHPCRHAEVMKKIIE 62
           + +PL    M ED+  DY  KTVT+E       PP+  AS+HPC+HA VMK +++
Sbjct: 206 TNSPLPPISMMEDIVGDYKDKTVTLEDF-IFTDPPIKTASVHPCKHASVMKVLLD 259



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/24 (66%), Positives = 20/24 (83%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           RTY L+ITY  YY+TPRL+L GY+
Sbjct: 180 RTYTLYITYTPYYRTPRLYLLGYD 203


>gi|406702468|gb|EKD05484.1| autophagy-related protein [Trichosporon asahii var. asahii CBS
           8904]
          Length = 313

 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 12/77 (15%)

Query: 267 GVAEYLTPVLKESKFRETGVVTP------------EEFVAAGDHLVHHCPTWQWASGDES 314
            V +YL+PVL+ESKF+E G +TP            EEFVAAGD L    P WQW  GD  
Sbjct: 12  AVRDYLSPVLRESKFKEHGRITPGELHHHYQADRAEEFVAAGDFLTFKFPVWQWEKGDPG 71

Query: 315 KAKSYLPPNKQFLITKN 331
           +A+ +LP +KQ+LIT+N
Sbjct: 72  RARDFLPADKQYLITRN 88



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
           + PLTV ++++DV  D+A KT+TME+ PH  G  +AS+HPC+HA VMKK I+ + E   E
Sbjct: 182 KKPLTVKEIFQDVPADHAFKTMTMEAFPH-SGTQLASVHPCKHASVMKKFIDRMEESTAE 240

Query: 71  L 71
           +
Sbjct: 241 V 241



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 28/33 (84%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNERFK 239
           ++++ RTYD +I+YDK+YQTPR WL+GY+E  K
Sbjct: 151 NLLQVRTYDCYISYDKHYQTPRFWLFGYDEHKK 183



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            TV ++++DV  D+A KT+TME+ PH  G  +AS+HPC+
Sbjct: 185 LTVKEIFQDVPADHAFKTMTMEAFPH-SGTQLASVHPCK 222


>gi|68069687|ref|XP_676755.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56496592|emb|CAH99545.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 305

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFL 327
           V  Y  P+   S F + G +TP EFV AGD L H   TW+W   D+++   +LP  KQFL
Sbjct: 11  VYSYFKPITNSSSFIKNGTLTPSEFVDAGDFLTHKFKTWEWMEADDNRTVRHLPEKKQFL 70

Query: 328 ITKNVPCPRRCKQID 342
           I++NVPC  R K ++
Sbjct: 71  ISRNVPCKHRIKDLN 85



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 23/114 (20%)

Query: 10  SRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG 69
           +R PL  ++++ED+  DY+ KTVT+     L       I   RHAE+M  +I   +  G 
Sbjct: 181 NRHPLKSEEIFEDILSDYSYKTVTVFYFELLN----LFIFFYRHAEIMLNVINNWIGEGK 236

Query: 70  E--------------LGVH-----MYLIIFLKFVQSVIPTIEYDFTQNFTVDQM 104
           E              L ++     +YL+  LKF+  VIPTIEYDFT +  +  +
Sbjct: 237 EPSMRTIIVIFHFIYLFIYFFRHDLYLLFLLKFISGVIPTIEYDFTTDIEIPSL 290



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           +    DI+  R+YD+ ITYD YY+TPR+WL+GYNE
Sbjct: 146 NHHISDIISIRSYDISITYDAYYETPRIWLFGYNE 180


>gi|254579817|ref|XP_002495894.1| ZYRO0C05500p [Zygosaccharomyces rouxii]
 gi|238938785|emb|CAR26961.1| ZYRO0C05500p [Zygosaccharomyces rouxii]
          Length = 290

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS-GDESKAKSY 319
           ++ T     EYLTPV  +S F  TG VTP+EF  AGD+L H  PTW+W     +   + +
Sbjct: 2   IRSTLSSWREYLTPVSHKSTFLTTGNVTPDEFRKAGDYLCHMFPTWKWNEPSKDISYRDF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
           LP +KQFL+++ VP   R +++    +     E E DE+GW+
Sbjct: 62  LPQDKQFLVSRKVPSNERAQELVSVSQN----EPEVDEDGWL 99



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 30/122 (24%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G ++ GV    PLT  +M+ED++ DY  KT T+E  P      ++ SIHPC+HA VMK 
Sbjct: 169 VGFSSAGV----PLTPQEMFEDIAPDYRTKTATIEKLPFYKHSVLSVSIHPCKHANVMKT 224

Query: 60  IIETVL-------------------------EGGGELGVHMYLIIFLKFVQSVIPTIEYD 94
           +++ V                          +    L V  YL++FLKF+ SV P+IE+D
Sbjct: 225 LLDKVRTVRQRRREEENREKDDQDDWEDVQEDLDDALRVDQYLVVFLKFITSVTPSIEHD 284

Query: 95  FT 96
           +T
Sbjct: 285 YT 286


>gi|343476834|emb|CCD12188.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 270

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 6/84 (7%)

Query: 281 FRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCKQ 340
           F ETG +TP EFV AGD L+H  P W WA G E + + +LPPNK++LI +  PC  R   
Sbjct: 26  FHETGTLTPSEFVEAGDELLHKMPVWSWAEGPE-EIQPFLPPNKKYLIYRGAPCYERAAG 84

Query: 341 IDYCEEKQKIIENEQDEEGWVDTH 364
               E K+      +DE+GWV TH
Sbjct: 85  GPGGESKES-----EDEDGWVTTH 103



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 9/92 (9%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PLT  +M EDV     ++TV+++ HP L    + SIHPCRHAE M+++I+ +     E  
Sbjct: 177 PLTTSEMMEDVYPVNRERTVSIDPHPFLQAACI-SIHPCRHAETMRRMIQHMKRRVEEES 235

Query: 71  ------LGVHMYLIIFLKFVQSVIPTIEYDFT 96
                    HM L +FLKF+ S +P+IEYD +
Sbjct: 236 KGADFVFPTHMALFLFLKFISSAVPSIEYDLS 267



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 17/27 (62%), Positives = 23/27 (85%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           R R YD+++TYD+YYQTPR++L GY E
Sbjct: 146 RCRLYDVYMTYDQYYQTPRIFLIGYAE 172


>gi|19113456|ref|NP_596664.1| autophagy associated protein Atg3 [Schizosaccharomyces pombe 972h-]
 gi|62899671|sp|O43035.1|ATG3_SCHPO RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme atg3
 gi|2950472|emb|CAA17786.1| autophagy associated protein Atg3 [Schizosaccharomyces pombe]
          Length = 275

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 15/123 (12%)

Query: 266 LGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQ 325
           L   E++TP  K S F  TG+++PEEFV AGD+LV   PTW W  GD  + + +LP +KQ
Sbjct: 10  LNWREHITPASKTSDFENTGMISPEEFVLAGDYLVSKFPTWSWECGD--RIRGFLPKDKQ 67

Query: 326 FLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETTGKDIAIEDKISEISL 385
           +L+T++V C +R   I   EE             WVD    D     D   +D IS I  
Sbjct: 68  YLVTRHVFCVQRNINIGVNEE-------------WVDIETDDTRNKDDDQDDDAISSIHS 114

Query: 386 DAS 388
           D S
Sbjct: 115 DTS 117



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPG-PPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           LT+  +YEDVS ++A KTVTME  PH      MAS+HPC+HA V+ K+I+   E    + 
Sbjct: 189 LTMKDIYEDVSGEHAGKTVTMEPFPHYHSHNTMASVHPCKHASVLLKLIKQHRERNDPIR 248

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFT 96
           V  Y+++FLKFV +++P  E D+T
Sbjct: 249 VDQYMVLFLKFVSTMLPYFEIDYT 272



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPG-PPMASIHPCR--AIKSKASNQTQSCNKP 153
           Q  T+  +YEDVS ++A KTVTME  PH      MAS+HPC+  ++  K   Q +  N P
Sbjct: 187 QLLTMKDIYEDVSGEHAGKTVTMEPFPHYHSHNTMASVHPCKHASVLLKLIKQHRERNDP 246



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 17/24 (70%), Positives = 21/24 (87%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           R YDL+I YDKYY+TPRL+L G+N
Sbjct: 160 RYYDLYIVYDKYYRTPRLFLRGWN 183


>gi|403215314|emb|CCK69813.1| hypothetical protein KNAG_0D00610 [Kazachstania naganishii CBS
           8797]
          Length = 303

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 35/127 (27%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G N QG    +PLT D+M+ED++++Y  KT T+E  P   G  ++ SIHPC+HA VMK 
Sbjct: 177 VGYNAQG----SPLTADEMFEDITKEYRHKTATIEKLPFYKGTVISVSIHPCKHANVMKV 232

Query: 60  IIETV---------------------LEGGGE---------LGVHMYLIIFLKFVQSVIP 89
           ++E +                     +E   E         L V  YL++FLKF+  +IP
Sbjct: 233 LLEKIRQVKKRERDQTEQSQLQSTESMEDDWEDLQDDINDTLRVDQYLVVFLKFITGIIP 292

Query: 90  TIEYDFT 96
           +IE+D+T
Sbjct: 293 SIEHDYT 299



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 4/73 (5%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDES----KAKSYLPPNKQ 325
           EYLTPV  +S F  +G +TPEEF  +GD+L H  PTW+W   +ES      + +LP  KQ
Sbjct: 11  EYLTPVTHKSTFFSSGEITPEEFTLSGDYLTHMFPTWRWNGNEESLKNASVRDFLPEGKQ 70

Query: 326 FLITKNVPCPRRC 338
           FL+T+ VP   R 
Sbjct: 71  FLVTRKVPSSVRA 83



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 15/84 (17%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPC-------------RAIKSKAS 144
            T D+M+ED++++Y  KT T+E  P   G  ++ SIHPC             R +K +  
Sbjct: 186 LTADEMFEDITKEYRHKTATIEKLPFYKGTVISVSIHPCKHANVMKVLLEKIRQVKKRER 245

Query: 145 NQTQSCNKPNSTEEEDDDDEEALD 168
           +QT+  ++  STE  +DD E+  D
Sbjct: 246 DQTEQ-SQLQSTESMEDDWEDLQD 268


>gi|367001398|ref|XP_003685434.1| hypothetical protein TPHA_0D03650 [Tetrapisispora phaffii CBS 4417]
 gi|357523732|emb|CCE63000.1| hypothetical protein TPHA_0D03650 [Tetrapisispora phaffii CBS 4417]
          Length = 331

 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW--ASGDESKAKS 318
           ++ T     EYLTPV  +S F  TG +TPEEF+ AGD+L H  P W W  A+ D S  +S
Sbjct: 2   LRSTIRNWREYLTPVSHKSTFLNTGEITPEEFIQAGDYLCHMFPIWSWNEATKDISN-RS 60

Query: 319 YLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI 350
           +LP +KQFL+ + VP  +R +     ++  K+
Sbjct: 61  FLPEDKQFLVVRKVPSSQRAQTFTSFKDDDKV 92



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 36/121 (29%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIETVL----- 65
           +PL  ++M+ED++ DY  KT T+E  P         SIHPC+HA VM+ ++E V      
Sbjct: 207 SPLIANEMFEDITPDYRAKTATIEKLPFYKNSIASVSIHPCKHANVMRVLLEKVASVKQK 266

Query: 66  ------------EGGGE------------------LGVHMYLIIFLKFVQSVIPTIEYDF 95
                       + GGE                  + V MYL++FLKF+ SV P IE+D+
Sbjct: 267 KAEEDAKVEKKHDCGGESESNQDDWEDVQIDMSNTIRVDMYLVVFLKFITSVTPGIEHDY 326

Query: 96  T 96
           T
Sbjct: 327 T 327


>gi|213404078|ref|XP_002172811.1| autophagy associated protein Apg3 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000858|gb|EEB06518.1| autophagy associated protein Apg3 [Schizosaccharomyces japonicus
           yFS275]
          Length = 279

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPG-PPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           L++  +YEDVS ++A KTVTME  PH      MAS+HPC+HA V+ K+++     G    
Sbjct: 193 LSMKSIYEDVSVEHAGKTVTMEPFPHFHSHNSMASVHPCKHASVLLKLMKQYANRGESFE 252

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFT 96
           V  Y+++FLKF+ +++P  E D+T
Sbjct: 253 VDHYMVLFLKFISTMLPYFEVDYT 276



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 53/71 (74%), Gaps = 3/71 (4%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLIT 329
           +++TP +K+S F +TG+++PE+FV AGD+LV   PTW+W +GD  + + +LP ++Q+L+T
Sbjct: 14  QHITPPVKDSNFEKTGMISPEQFVLAGDYLVRKFPTWKWETGD--RIRDFLPKDRQYLVT 71

Query: 330 KNV-PCPRRCK 339
           K+V   PR  K
Sbjct: 72  KHVYSIPREVK 82



 Score = 45.1 bits (105), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPG-PPMASIHPCRAIKSKASNQTQSCNKPNS 155
           Q  ++  +YEDVS ++A KTVTME  PH      MAS+HPC+          Q  N+  S
Sbjct: 191 QLLSMKSIYEDVSVEHAGKTVTMEPFPHFHSHNSMASVHPCKHASVLLKLMKQYANRGES 250

Query: 156 TE 157
            E
Sbjct: 251 FE 252



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 16/26 (61%), Positives = 22/26 (84%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYN 235
           + R YDL+I YDKYY+TPRL+L G++
Sbjct: 162 KARLYDLYIAYDKYYRTPRLYLRGWD 187


>gi|343471627|emb|CCD15997.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 274

 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 4/84 (4%)

Query: 281 FRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCKQ 340
           F ETG +TP EFV AGD L+H  P W WA G E + + +LPPNK++LI +  PC  R   
Sbjct: 26  FHETGTLTPSEFVEAGDELLHKMPVWSWAEGPE-EIQPFLPPNKKYLIYRGAPCYERAAG 84

Query: 341 IDYCEEKQKIIENEQDEEGWVDTH 364
                ++ K     +DE+GWV TH
Sbjct: 85  GPGTGDETK---ESEDEDGWVTTH 105



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 9/97 (9%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PLT  +M EDV     ++TV+++ HP L    + SIHPCRHAE M+++I+ +     E  
Sbjct: 179 PLTTSEMMEDVYPVNRERTVSIDPHPFLQAACI-SIHPCRHAETMRRMIQHMKRRVEEES 237

Query: 71  ------LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
                    HM L +FLKF+ S +P+IEYD +    +
Sbjct: 238 KGADFVFPTHMALFLFLKFISSAVPSIEYDLSTGIDI 274



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 17/27 (62%), Positives = 23/27 (85%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           R R YD+++TYD+YYQTPR++L GY E
Sbjct: 148 RCRLYDVYMTYDQYYQTPRIFLIGYAE 174


>gi|169621141|ref|XP_001803981.1| hypothetical protein SNOG_13776 [Phaeosphaeria nodorum SN15]
 gi|121924545|sp|Q0U388.1|ATG3_PHANO RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|111057680|gb|EAT78800.1| hypothetical protein SNOG_13776 [Phaeosphaeria nodorum SN15]
          Length = 350

 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 20/123 (16%)

Query: 252 NRMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASG 311
           N ++S I++ +       E    +   S FRETG +TPEEFV AGD LV   P+WQW  G
Sbjct: 4   NFVRSYIDTFR-------ERTAAISHTSTFRETGQITPEEFVLAGDFLVFKFPSWQW--G 54

Query: 312 DESKAKS---YLPPNKQFLITKNVPCPRRCKQIDYCEEKQ--KIIEN------EQDEEGW 360
           D S A     YLP  KQ+L+T+ VPC RR       E  Q   I+ +        D++GW
Sbjct: 55  DASSAGKRVPYLPEGKQYLMTRGVPCHRRLDDNFAGEAGQDETIVGDGFAGSEGADDDGW 114

Query: 361 VDT 363
           + T
Sbjct: 115 LRT 117



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 59/145 (40%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLP-GPPMASIHPCRHAEVMKKIIETV------- 64
           PL   +M ED+  DY  KTVT+E  P        AS+HPC+HA VMK +++         
Sbjct: 205 PLKPQEMMEDIVGDYKDKTVTIEDFPFFEHALKTASVHPCKHASVMKVLLDRADAALKLR 264

Query: 65  ---LEGGGELG------------------------------------------------V 73
              L+ G ++G                                                V
Sbjct: 265 LAKLKAGKDIGKLDTGMEGLVDDTRLLKLSEQAKGKEGDEAKDDWEVLSEGGDDEVAIRV 324

Query: 74  HMYLIIFLKFVQSVIPTIEYDFTQN 98
             YL++FLKF+ SV P IE+DFT  
Sbjct: 325 DQYLVVFLKFMASVTPGIEHDFTMG 349


>gi|154343712|ref|XP_001567800.1| putative autophagocytosis protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134065134|emb|CAM40560.1| putative autophagocytosis protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 275

 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 13/102 (12%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE- 70
            PLT+DQM EDV +    KTVT++ HP L   P  SIHPCRHAE M+ ++  + E     
Sbjct: 174 TPLTLDQMKEDVYRSNYGKTVTIDPHPIL-SIPCISIHPCRHAETMRSLMHRMQENYDRE 232

Query: 71  -----------LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
                         H+ +++FLKF+ +V+PTI+YD +  F +
Sbjct: 233 KANVPNAEPFVFPTHLAMLLFLKFISTVLPTIQYDVSSGFNL 274



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 6/85 (7%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S F+ TG +TP+EFV AGD LVH  P WQW  G ES  + YLP  K+ ++ +  PC  R 
Sbjct: 25  SDFQTTGRLTPKEFVEAGDELVHKNPVWQWIGGPES-VQDYLPKEKKCIVYRGAPCNERA 83

Query: 339 KQIDYCEEKQKIIENEQDEEGWVDT 363
             +D+     + +    DE+G+V T
Sbjct: 84  P-VDHSSASPETV----DEDGFVLT 103



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 15/23 (65%), Positives = 20/23 (86%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           R YD++I YD+YYQTPR++L GY
Sbjct: 146 RIYDVYIVYDRYYQTPRMYLVGY 168



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 94  DFTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIKSKAS 144
           D     T+DQM EDV +    KTVT++ HP L   P  SIHPCR  ++  S
Sbjct: 171 DHVTPLTLDQMKEDVYRSNYGKTVTIDPHPIL-SIPCISIHPCRHAETMRS 220


>gi|365987686|ref|XP_003670674.1| hypothetical protein NDAI_0F01120 [Naumovozyma dairenensis CBS 421]
 gi|343769445|emb|CCD25431.1| hypothetical protein NDAI_0F01120 [Naumovozyma dairenensis CBS 421]
          Length = 336

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 7/94 (7%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW------ASGDES 314
           ++ T     EYLTP+  +S F  TG +TPEEFV AGD+LV+  P W+W       + +E 
Sbjct: 2   LRSTLSNWREYLTPITHKSTFLTTGQITPEEFVQAGDYLVNMFPIWKWNDDDNDINVNEL 61

Query: 315 KAKSYLPPNKQFLITKNVPCPRRCKQI-DYCEEK 347
             + +LP  KQFL+ + VPC  R   I D+ +E+
Sbjct: 62  SLRDFLPDEKQFLVIRKVPCLERADDIMDFKDER 95



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 46/138 (33%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKK 59
           +G N  G+    PLT  QM+ED+S DY  KT T+E  P      P  SIHPC+HA VMK 
Sbjct: 199 VGFNGDGL----PLTPKQMFEDISPDYRSKTATIEKLPFFKNSIPSVSIHPCKHANVMKV 254

Query: 60  IIETVL---------------------------------EGGGEL--------GVHMYLI 78
           +++ V                                  EG  +L            YL+
Sbjct: 255 LLDKVRIVNQRRREEQNHNEKNDELEKKEREEEGQHPDKEGWEDLQDDINDTIRADQYLV 314

Query: 79  IFLKFVQSVIPTIEYDFT 96
           +FLKF+ SV P+IE+D+T
Sbjct: 315 VFLKFITSVTPSIEHDYT 332



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
            T  QM+ED+S DY  KT T+E  P      P  SIHPC+
Sbjct: 208 LTPKQMFEDISPDYRSKTATIEKLPFFKNSIPSVSIHPCK 247


>gi|363748947|ref|XP_003644691.1| hypothetical protein Ecym_2121 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888324|gb|AET37874.1| Hypothetical protein Ecym_2121 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 292

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA-KSY 319
           ++ T     EYLTPV  +S F  TG +TP EFV AGD+L H  PTW+W +     + + +
Sbjct: 2   IRSTLSNWREYLTPVSHQSTFEHTGQITPNEFVKAGDYLCHMFPTWKWNNSQPGISYRDF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQI 341
           LP  KQFL+T+ VP   R  + 
Sbjct: 62  LPKEKQFLVTRKVPSNVRAAEF 83



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 32/124 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G NN G     PLT +Q ++D++ DY  KT T+E  P       + SIHPC+HA VM+ 
Sbjct: 169 VGFNNDG----TPLTPEQTFQDIAPDYRTKTATIEKLPFFKTSVTSVSIHPCKHANVMRV 224

Query: 60  IIETVL---------------EGGGE------------LGVHMYLIIFLKFVQSVIPTIE 92
           ++E V                +  GE            L V  YL++FLKF+ SV P IE
Sbjct: 225 LMEKVRTVKQRLQESNNQDGSQRTGEEWEDLQDDMDNGLRVDQYLVVFLKFITSVTPGIE 284

Query: 93  YDFT 96
           +D+T
Sbjct: 285 HDYT 288


>gi|302308448|ref|NP_985372.2| AFL178Wp [Ashbya gossypii ATCC 10895]
 gi|442570125|sp|Q755K1.2|ATG3_ASHGO RecName: Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3
 gi|299790635|gb|AAS53196.2| AFL178Wp [Ashbya gossypii ATCC 10895]
 gi|374108600|gb|AEY97506.1| FAFL178Wp [Ashbya gossypii FDAG1]
          Length = 282

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 29/121 (23%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G NN G     PLT  QM++D++ DY  KT T+E  P      +A SIHPCRHA VM+ 
Sbjct: 162 VGFNNDG----TPLTPQQMFQDIAPDYRTKTATIEKLPFFKSAVVAVSIHPCRHANVMRV 217

Query: 60  IIETVL------------------------EGGGELGVHMYLIIFLKFVQSVIPTIEYDF 95
           ++E V                         E    L V  YL++FLKF+ SV P IE+D+
Sbjct: 218 LMEKVRAAKQKPVEEEQPDGPREDWEDLQDEVDSSLRVDQYLVVFLKFITSVTPGIEHDY 277

Query: 96  T 96
           T
Sbjct: 278 T 278



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKA-KSY 319
           ++ T     EYLTPV  +S F  TG +TPEEF+ AGD+L H  PTW+W         + +
Sbjct: 2   LRSTLSNWREYLTPVTHQSTFENTGQITPEEFIKAGDYLCHMFPTWRWNQQQGGMVYRDF 61

Query: 320 LPPNKQFLITKNVPCPRRC 338
           LP ++QFL+T+ VP   R 
Sbjct: 62  LPQDRQFLVTRKVPSNMRA 80



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCR---AIKSKASNQTQSCNKPN 154
            T  QM++D++ DY  KT T+E  P      +A SIHPCR    ++        +  KP 
Sbjct: 171 LTPQQMFQDIAPDYRTKTATIEKLPFFKSAVVAVSIHPCRHANVMRVLMEKVRAAKQKPV 230

Query: 155 STEEEDDDDEEALDMED 171
             E+ D   E+  D++D
Sbjct: 231 EEEQPDGPREDWEDLQD 247


>gi|157874675|ref|XP_001685756.1| putative autophagocytosis protein [Leishmania major strain
           Friedlin]
 gi|68128829|emb|CAJ05922.1| putative autophagocytosis protein [Leishmania major strain
           Friedlin]
          Length = 275

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PL++DQM EDV +    KTVT++ HP L   P  SIHPCRHAE M+ +I  + E      
Sbjct: 175 PLSMDQMKEDVYRSNYGKTVTIDPHPVL-SIPCISIHPCRHAETMRSLIHRMQENYNREK 233

Query: 71  ----------LGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
                        H+ L++FLKF+ +V+P I+YD +  F
Sbjct: 234 ANDPSAEPFVFPTHLALLLFLKFISTVLPAIQYDVSSGF 272



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S F+ TG +TP+EFV AGD LV   P WQW  G ES  + YLP  K+ ++ +  P   R 
Sbjct: 25  SDFQTTGRLTPKEFVEAGDELVQKNPVWQWVGGPES-VQDYLPKEKKCIVYRGAPSTERA 83



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           R YD++I YDKYYQTPR++L GY
Sbjct: 146 RVYDVYIVYDKYYQTPRMYLVGY 168



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 94  DFTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           D     ++DQM EDV +    KTVT++ HP L   P  SIHPCR
Sbjct: 171 DHVTPLSMDQMKEDVYRSNYGKTVTIDPHPVL-SIPCISIHPCR 213


>gi|401427586|ref|XP_003878276.1| putative autophagocytosis protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322494524|emb|CBZ29826.1| putative autophagocytosis protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 275

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 13/99 (13%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PL++DQM EDV +    KTVT++ HP L   P  SIHPCRHAE M+ ++  + E      
Sbjct: 175 PLSMDQMKEDVYRSNYGKTVTIDPHPVL-SIPCISIHPCRHAETMRSLMHRMQENYNREK 233

Query: 71  ----------LGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
                        H+ L++FLKF+ +V+PT++YD +  F
Sbjct: 234 ANDPNAEPFVFPTHLALLLFLKFISTVLPTVQYDVSSGF 272



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S F+ TG +TP+EFV AGD LV   P WQW  G ES  + YLP  K+ ++ +  PC  R 
Sbjct: 25  SDFQTTGRLTPKEFVEAGDELVQKNPVWQWVGGPES-VQDYLPKEKKCIVYRGAPCTERA 83



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           R YD++I YDKYYQTPR++L GY
Sbjct: 146 RVYDVYIVYDKYYQTPRMYLVGY 168



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 68  GGELGVHMYLIIFLKFVQS---VIPTIEYDFTQNFTVDQMYEDVSQDYAKKTVTMESHPH 124
              L V+   I++ K+ Q+    +     D     ++DQM EDV +    KTVT++ HP 
Sbjct: 142 NSNLRVYDVYIVYDKYYQTPRMYLVGYASDHVTPLSMDQMKEDVYRSNYGKTVTIDPHPV 201

Query: 125 LPGPPMASIHPCRAIKSKAS 144
           L   P  SIHPCR  ++  S
Sbjct: 202 L-SIPCISIHPCRHAETMRS 220


>gi|398405128|ref|XP_003854030.1| hypothetical protein MYCGRDRAFT_99699 [Zymoseptoria tritici IPO323]
 gi|339473913|gb|EGP89006.1| hypothetical protein MYCGRDRAFT_99699 [Zymoseptoria tritici IPO323]
          Length = 363

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 268 VAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWA-SGDESKAKSYLPPNKQF 326
           + +   P+   S FRE G VTPEEFV AGD+L    P+W W  +   S+  ++LP +KQ+
Sbjct: 12  LRDRFAPISHNSTFRENGQVTPEEFVKAGDYLTFKFPSWSWQPAASPSQRVAHLPEDKQY 71

Query: 327 LITKNVPCPRRCKQIDYC 344
           LIT+ VPC +R K  D+ 
Sbjct: 72  LITRGVPCRKRIKADDFA 89



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPM--ASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E   +   PP+  AS+HPC+HA VMK +++
Sbjct: 215 PLQPISMMEDIVGDYKDKTVTLEDF-NFTDPPIKTASVHPCKHASVMKVLLD 265



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYN 235
           R Y L+ITY  YY+TPRL+L GY+
Sbjct: 186 RNYTLYITYSPYYRTPRLYLSGYD 209


>gi|410080488|ref|XP_003957824.1| hypothetical protein KAFR_0F00920 [Kazachstania africana CBS 2517]
 gi|372464411|emb|CCF58689.1| hypothetical protein KAFR_0F00920 [Kazachstania africana CBS 2517]
          Length = 293

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 30/115 (26%)

Query: 12  APLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKKIIETV------ 64
            PLT ++M++D++ +Y  KT T+E  P    P ++ SIHPC+HA VMK ++E V      
Sbjct: 175 TPLTSEEMFQDITMEYRDKTATIEKLPFFKVPILSVSIHPCKHANVMKTLLEKVRLVNQK 234

Query: 65  ----LEG-------------------GGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
               LEG                      L +  YL++FLKF+ SV PTIE+D+T
Sbjct: 235 RRRELEGQENHIRHDDDEWEDLQDDVNDTLKIDQYLVVFLKFISSVTPTIEHDYT 289



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 261 VKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS-GDESKAKSY 319
           ++ T     EYLTP+  +S F  TG +TP EF  AGD+LV   P W+W + G     + +
Sbjct: 2   LRSTLSSWREYLTPITNKSTFLVTGQITPLEFQHAGDYLVSMFPIWKWNNDGSNINFRDF 61

Query: 320 LPPNKQFLITKNVPCPRRCKQI 341
           LP +KQFL+ + VPC  R + +
Sbjct: 62  LPHDKQFLVCRKVPCHARAQSL 83


>gi|323303204|gb|EGA57003.1| Atg3p [Saccharomyces cerevisiae FostersB]
          Length = 172

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 32/124 (25%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCRHAEVMKK 59
           +G N+ G    +PL+ +QM+ED+S DY  KT T+E  P      ++ SIHPC+HA VMK 
Sbjct: 49  VGFNSNG----SPLSPEQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKI 104

Query: 60  II----------------ETVLEGGGE-----------LGVHMYLIIFLKFVQSVIPTIE 92
           ++                E  L+G G+           L V  YLI+FLKF+ SV P+I+
Sbjct: 105 LLDKVRVVRQRRRKELQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLKFITSVTPSIQ 164

Query: 93  YDFT 96
           +D+T
Sbjct: 165 HDYT 168



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMA-SIHPCR 137
           +QM+ED+S DY  KT T+E  P      ++ SIHPC+
Sbjct: 61  EQMFEDISADYRTKTATIEKLPFYKNSVLSVSIHPCK 97


>gi|444313805|ref|XP_004177560.1| hypothetical protein TBLA_0A02420 [Tetrapisispora blattae CBS 6284]
 gi|387510599|emb|CCH58041.1| hypothetical protein TBLA_0A02420 [Tetrapisispora blattae CBS 6284]
          Length = 347

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 65/149 (43%), Gaps = 57/149 (38%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKK 59
           +G NN G    +PLT DQM+ED+S DY  KT T+E  P L    P  SIHPC+HA VMK 
Sbjct: 199 VGFNNDG----SPLTPDQMFEDISPDYRTKTATIEKLPFLKKSIPSVSIHPCKHANVMKI 254

Query: 60  IIETVL-------------------------------------------EGGGE------ 70
           + + +                                            E G E      
Sbjct: 255 LFDRIRLARQNRRKQEEENAKATPTDLTTTDVTTTTPSHATTLPEENSKEDGWEDLQDDI 314

Query: 71  ---LGVHMYLIIFLKFVQSVIPTIEYDFT 96
              L V  YLI+FLKF+ SV P+IE+D+T
Sbjct: 315 NDSLRVDQYLIVFLKFITSVTPSIEHDYT 343



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 12/103 (11%)

Query: 270 EYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW--ASGDESKAKSYLPPNKQFL 327
           EY TPV   S F+ TG +TP EFV AGD+L    PTW W  A+ D S  + +LP ++QFL
Sbjct: 11  EYWTPVTNTSTFQTTGQITPNEFVKAGDYLTSMFPTWYWNKATNDVS-FRDFLPKDRQFL 69

Query: 328 ITKNVPCPRR----CKQIDYCEEKQKIIENE-----QDEEGWV 361
           +++ V C +R             ++ II++E      DE+GW+
Sbjct: 70  VSRKVVCNKRAPDSANNTTDGLTREIIIDSEINDGKSDEDGWL 112



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
            T DQM+ED+S DY  KT T+E  P L    P  SIHPC+
Sbjct: 208 LTPDQMFEDISPDYRTKTATIEKLPFLKKSIPSVSIHPCK 247


>gi|407862994|gb|EKG07813.1| autophagocytosis associated protein, putative [Trypanosoma cruzi]
          Length = 270

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 13/100 (13%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV-----LEGG 68
           LT D+M +DV     +KTV+++ HP L    + SIHPCRHAE MK++I+ +      EG 
Sbjct: 172 LTKDEMMQDVYASNREKTVSIDPHPFLKAACI-SIHPCRHAETMKRLIQHMKTRYEAEGA 230

Query: 69  GE-------LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E          HM   +FLKF+ SV+PTIEYD + +  +
Sbjct: 231 NEAEKDAFVFPTHMAFFLFLKFISSVVPTIEYDLSTSIDI 270



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L  V   S F+ TG +TP EFV AGD LV   P W WA G+E   + +LPP K++L+   
Sbjct: 17  LNGVKTVSNFQVTGTLTPLEFVEAGDELVQKMPVWAWAEGEEG-IQPFLPPRKKYLVYHG 75

Query: 332 VPCPRRCKQIDYCEEKQKIIENEQD-EEGWVDTH 364
            PC +R    D       + ENE + E+GWV TH
Sbjct: 76  APCYQRAPDAD------SLGENEMEGEDGWVTTH 103



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           + R YD+++ YD+YYQTPR++L GY E
Sbjct: 140 KCRLYDVYMVYDQYYQTPRIFLIGYAE 166


>gi|71649849|ref|XP_813636.1| autophagocytosis associated protein [Trypanosoma cruzi strain CL
           Brener]
 gi|70878537|gb|EAN91785.1| autophagocytosis associated protein, putative [Trypanosoma cruzi]
          Length = 270

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 13/100 (13%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV-----LEGG 68
           LT D+M +DV     +KTV+++ HP L    + SIHPCRHAE MK++I+ +      EG 
Sbjct: 172 LTKDEMMQDVYASNREKTVSIDPHPFLKAACI-SIHPCRHAETMKRLIQHMKTRYEAEGA 230

Query: 69  GE-------LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E          HM   +FLKF+ SV+PTIEYD + +  +
Sbjct: 231 NEAEKDAFVFPTHMAFFLFLKFISSVVPTIEYDLSTSIDI 270



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L  V   S F+ TG +TP EFV AGD LV   P W WA G+E   + +LPP K++L+   
Sbjct: 17  LNGVKTVSNFQVTGTLTPLEFVEAGDELVQKMPVWAWAEGEEG-IQPFLPPRKKYLVYHG 75

Query: 332 VPCPRRCKQIDYCEEKQKIIENEQD-EEGWVDTH 364
            PC +R    D       + ENE + E+GWV TH
Sbjct: 76  APCYQRAPDAD------SLGENEMEGEDGWVTTH 103



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           + R YD+++ YD+YYQTPR++L GY E
Sbjct: 140 KCRLYDVYMVYDQYYQTPRIFLIGYAE 166


>gi|398021387|ref|XP_003863856.1| autophagocytosis protein, putative [Leishmania donovani]
 gi|322502090|emb|CBZ37173.1| autophagocytosis protein, putative [Leishmania donovani]
          Length = 275

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PL++ QM EDV +    KTVT++ HP L   P  SIHPCRHAE M+ ++  + E      
Sbjct: 175 PLSMGQMKEDVYRSNYGKTVTIDPHPVL-SIPCISIHPCRHAETMRSLMHRMQENYNREK 233

Query: 71  ----------LGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
                        H+ L++FLKF+ +V+PTI+YD +  F
Sbjct: 234 ANDPNAESFVFPTHLALLLFLKFISTVLPTIQYDVSSGF 272



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S F+ TG +TP+EFV AGD LV   P WQW  G ES  + YLP  K+ ++ +  PC  R 
Sbjct: 25  SDFQTTGRLTPKEFVEAGDELVQKNPVWQWVGGPES-VQDYLPKEKKCIVYRGAPCTERA 83



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           R YD++I YDKYYQTPR++L GY
Sbjct: 146 RVYDVYIVYDKYYQTPRMYLVGY 168


>gi|146097479|ref|XP_001468115.1| putative autophagocytosis protein [Leishmania infantum JPCM5]
 gi|134072482|emb|CAM71194.1| putative autophagocytosis protein [Leishmania infantum JPCM5]
          Length = 275

 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PL++ QM EDV +    KTVT++ HP L   P  SIHPCRHAE M+ ++  + E      
Sbjct: 175 PLSMGQMKEDVYRSNYGKTVTIDPHPVL-SIPCISIHPCRHAETMRSLMHRMQENYNREK 233

Query: 71  ----------LGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
                        H+ L++FLKF+ +V+PTI+YD +  F
Sbjct: 234 ANDPNAEPFVFPTHLALLLFLKFISTVLPTIQYDVSSGF 272



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 279 SKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRC 338
           S F+ TG +TP+EFV AGD LV   P WQW  G ES  + YLP  K+ ++ +  PC  R 
Sbjct: 25  SDFQTTGRLTPKEFVEAGDELVQKNPVWQWVGGPES-VQDYLPKEKKCIVYRGAPCTERA 83



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           R YD++I YDKYYQTPR++L GY
Sbjct: 146 RVYDVYIVYDKYYQTPRMYLVGY 168


>gi|326468613|gb|EGD92622.1| autophagocytosis protein [Trichophyton tonsurans CBS 112818]
          Length = 358

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPT-WQWASGDESKA 316
           +N ++     + + L P+   S FR TG VTPEEFV AGD+LV+  PT    A+   SK 
Sbjct: 1   MNVIRSKLNDIRDRLAPISNVSTFRNTGQVTPEEFVRAGDYLVYKFPTWSWSAASSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDE 357
            SYLP  KQFL+T+ VPC RR  +    +    II+ E  E
Sbjct: 61  VSYLPEGKQFLVTRGVPCNRRLDENFAGKAADIIIQGELGE 101



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCKHASVMKVLLD 256



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           +Q+ G     RTY L+ITY  YY+TPRL+L GY
Sbjct: 168 AQKGGKNAPLRTYSLYITYTPYYKTPRLYLSGY 200



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 16/111 (14%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRAI--------KSKASNQTQSCNKPN 154
           M ED+  DY  KTVT+E  P   G   MAS+HPC+          ++ A+ + +   +  
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCKHASVMKVLLDRADAALKIRREKQSK 271

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQEC 205
            ++E  D  E  L+       G +D+ +    +   + +S S  AGD  E 
Sbjct: 272 RSKEGKDKVESGLE-------GLVDDTEKLKVSGDDKSKSGSGSAGDEWEV 315


>gi|326479906|gb|EGE03916.1| autophagy-like protein 3 [Trichophyton equinum CBS 127.97]
          Length = 358

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPT-WQWASGDESKA 316
           +N ++     + + L P+   S FR TG VTPEEFV AGD+LV+  PT    A+   SK 
Sbjct: 1   MNVIRSKLNDIRDRLAPISNVSTFRNTGQVTPEEFVRAGDYLVYKFPTWSWSAASSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDE 357
            SYLP  KQFL+T+ VPC RR  +    +    II+ E  E
Sbjct: 61  VSYLPEGKQFLVTRGVPCNRRLDENFAGKAADIIIQGELGE 101



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MASIHPC+HA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASIHPCKHASVMKVLLD 256



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           +Q+ G     RTY L+ITY  YY+TPRL+L GY
Sbjct: 168 AQKGGKNAPLRTYSLYITYTPYYKTPRLYLSGY 200



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 16/111 (14%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRAI--------KSKASNQTQSCNKPN 154
           M ED+  DY  KTVT+E  P   G   MASIHPC+          ++ A+ + +   +  
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASIHPCKHASVMKVLLDRADAALKIRREKQSK 271

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQEC 205
            ++E  D  E  L+       G +D+ +    +   + +S S  AGD  E 
Sbjct: 272 RSKEGKDKVESGLE-------GLVDDTEKLKVSGDDKSKSGSGSAGDEWEV 315


>gi|71421296|ref|XP_811761.1| autophagocytosis associated protein [Trypanosoma cruzi strain CL
           Brener]
 gi|70876462|gb|EAN89910.1| autophagocytosis associated protein, putative [Trypanosoma cruzi]
          Length = 270

 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 13/95 (13%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV-----LEGG 68
           LT D+M +DV     +KTV+++ HP L    + SIHPCRHAE MK++I+ +      EG 
Sbjct: 172 LTKDEMMQDVYASNREKTVSIDPHPFLKAACI-SIHPCRHAETMKRLIQHMKTRYEAEGA 230

Query: 69  GE-------LGVHMYLIIFLKFVQSVIPTIEYDFT 96
            E          HM   +FLKF+ SV+PTIEYD +
Sbjct: 231 NEAEKDAFVFPTHMAFFLFLKFISSVVPTIEYDLS 265



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L  V   S F+ TG +TP EFV AGD LV   P W WA G+E   + +LPP K++L+   
Sbjct: 17  LNGVKTVSNFQVTGTLTPLEFVEAGDELVQKMPVWAWAEGEEG-IQPFLPPRKKYLVYHG 75

Query: 332 VPCPRRCKQIDYCEEKQKIIENEQD-EEGWVDTH 364
            PC +R    D       + ENE + E+GWV TH
Sbjct: 76  APCYQRGPDAD------SLGENEMEGEDGWVTTH 103



 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           + R YD+++ YD+YYQTPR++L GY E
Sbjct: 140 KCRLYDVYMVYDQYYQTPRIFLIGYAE 166


>gi|47226783|emb|CAG06625.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 133

 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 37/42 (88%)

Query: 11  RAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 52
           R PLTV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 92  RQPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 133



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 97  QNFTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           Q  TV+QMYED+SQD+ KKTVT+E+HPHLP P M S+HPCR
Sbjct: 93  QPLTVEQMYEDISQDHVKKTVTIENHPHLPPPAMCSVHPCR 133



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 9/71 (12%)

Query: 169 MEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGD---IVRTRTYDLHITYDKYYQ 225
           ME++EESG L+  + ++        S         ECG    I++TRTYDL ITYDKYYQ
Sbjct: 26  MEEYEESGLLETDEATLDT------SKMIENKAKVECGSEDAILQTRTYDLCITYDKYYQ 79

Query: 226 TPRLWLYGYNE 236
           TPRLWL+GY+E
Sbjct: 80  TPRLWLFGYDE 90


>gi|327300719|ref|XP_003235052.1| autophagocytosis protein [Trichophyton rubrum CBS 118892]
 gi|326462404|gb|EGD87857.1| autophagocytosis protein [Trichophyton rubrum CBS 118892]
          Length = 371

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPT-WQWASGDESKA 316
           +N ++     + + L P+   S FR TG VTPEEFV AGD+LV+  PT    A+   SK 
Sbjct: 1   MNVIRSKLNDIRDRLAPISNVSTFRNTGQVTPEEFVRAGDYLVYKFPTWSWSAASSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDE 357
            SYLP  KQFL+T+ VPC RR  +    +    II+ E  E
Sbjct: 61  VSYLPEGKQFLVTRGVPCNRRLDENFAGKAADIIIQGELGE 101



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCKHASVMKVLLD 256



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           +Q+ G     RTY L+ITY  YY+TPRL+L GY
Sbjct: 168 AQKGGKNAPLRTYSLYITYTPYYKTPRLYLSGY 200



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPC+
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCK 246


>gi|302505657|ref|XP_003014535.1| hypothetical protein ARB_07097 [Arthroderma benhamiae CBS 112371]
 gi|302654645|ref|XP_003019124.1| hypothetical protein TRV_06847 [Trichophyton verrucosum HKI 0517]
 gi|291178356|gb|EFE34146.1| hypothetical protein ARB_07097 [Arthroderma benhamiae CBS 112371]
 gi|291182826|gb|EFE38479.1| hypothetical protein TRV_06847 [Trichophyton verrucosum HKI 0517]
          Length = 358

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPT-WQWASGDESKA 316
           +N ++     + + L P+   S FR TG VTPEEFV AGD+LV+  PT    A+   SK 
Sbjct: 1   MNVIRSKLNDIRDRLAPISNVSTFRNTGQVTPEEFVRAGDYLVYKFPTWSWSAASSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDE 357
            SYLP  KQFL+T+ VPC RR  +    +    II+ E  E
Sbjct: 61  VSYLPEEKQFLVTRGVPCNRRLDENFAGKAADIIIQGELGE 101



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCKHASVMKVLLD 256



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           +Q+ G     RTY L+ITY  YY+TPRL+L GY
Sbjct: 168 AQKGGKNAPLRTYSLYITYTPYYKTPRLYLSGY 200



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 16/111 (14%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRAI--------KSKASNQTQSCNKPN 154
           M ED+  DY  KTVT+E  P   G   MAS+HPC+          ++ A+ + +   +  
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCKHASVMKVLLDRADAALKIRREKQSK 271

Query: 155 STEEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQEC 205
            ++E  D  E  L+       G +D+ +    +   + +  SS AGD  E 
Sbjct: 272 RSKEGKDKVEAGLE-------GLVDDTEKLKVSGEDKSKGGSSSAGDEWEV 315


>gi|145504745|ref|XP_001438339.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405511|emb|CAK70942.1| unnamed protein product [Paramecium tetraurelia]
          Length = 240

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 6   QGV--KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIET 63
           QGV   S  PL   ++YED+   Y  +TVT+E HP+L      +IHPC H+  MK  ++ 
Sbjct: 141 QGVALNSGLPLKHQEIYEDIMSVYQNETVTVEEHPYL-HYQQVTIHPCNHSTTMKAFLDK 199

Query: 64  VLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
             + G E+     L IFLKF+QSV+PT+ YD T
Sbjct: 200 AKQNGAEIKPMQALFIFLKFMQSVMPTVVYDTT 232



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAK 317
           +   +G    V  + TP  K   F   G +TPE+FV AGD L      WQW      K  
Sbjct: 10  VQMFQGINNFVNSFATP--KVQDFYSKGWLTPEQFVEAGDQLT--MTGWQWKKAQVKKGV 65

Query: 318 SYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
               P K +LI  N     R K+    +      +N Q ++G++
Sbjct: 66  DPPHPEKMYLIA-NATSQTRIKEFLSFD-----FQNNQGQDGFL 103


>gi|407396867|gb|EKF27573.1| autophagocytosis associated protein, putative [Trypanosoma cruzi
           marinkellei]
 gi|407403168|gb|EKF29388.1| autophagocytosis associated protein, putative [Trypanosoma cruzi
           marinkellei]
          Length = 270

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 272 LTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKN 331
           L  V   S F+ TG +TP EFV AGD LV   P W WA G+E   + +LPP K++L+   
Sbjct: 17  LNGVKTVSNFQVTGTLTPLEFVEAGDELVQKMPVWTWAEGEEG-IQPFLPPRKKYLVYHG 75

Query: 332 VPCPRRCKQIDYCEEKQKIIENEQD-EEGWVDTH 364
            PC +R    D       + ENE + E+GWV TH
Sbjct: 76  APCYQRAPDAD------SLGENEMEGEDGWVTTH 103



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 13/100 (13%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV-----LEGG 68
           LT ++M +DV     +KTV+++ HP L    + SIHPCRHAE MK++I+ +      EG 
Sbjct: 172 LTKEEMMQDVYASNREKTVSIDPHPFLKAACI-SIHPCRHAETMKRLIQHMKTRYEAEGA 230

Query: 69  GE-------LGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
            E          HM   +FLKF+ SV+PTIEYD + +  +
Sbjct: 231 NETEKDAFVFPTHMAFFLFLKFISSVVPTIEYDLSTSIDI 270



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           + R YD+++ YD+YYQTPR++L GY E
Sbjct: 140 KCRLYDVYMVYDQYYQTPRIFLIGYAE 166


>gi|145487083|ref|XP_001429547.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124396640|emb|CAK62149.1| unnamed protein product [Paramecium tetraurelia]
          Length = 229

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 6   QGV--KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIET 63
           QGV   S  PL   ++YED+   Y  +TVT+E HP+L      +IHPC H+  MK  ++ 
Sbjct: 130 QGVALNSGLPLKHQEIYEDIMSVYQNETVTVEEHPYL-HYQQVTIHPCNHSTTMKAFLDK 188

Query: 64  VLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
             + G ++     L IFLKF+QSV+PT+ YD T
Sbjct: 189 AKQNGADIKPMQALFIFLKFMQSVMPTVVYDTT 221



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 10/100 (10%)

Query: 262 KGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLP 321
           +G    V  ++TP  K   F   G +TPE+F+ AGD L      WQW      K      
Sbjct: 3   QGINNFVNSFVTP--KPQDFYSKGWMTPEQFIEAGDQLT--MTGWQWKKAQVKKGVDPPH 58

Query: 322 PNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWV 361
           P K +LI  N     R K+    +      +N Q ++G++
Sbjct: 59  PEKMYLIA-NATSQTRIKEFLSFD-----FQNNQGQDGFL 92


>gi|315048421|ref|XP_003173585.1| autophagy-like protein 3 [Arthroderma gypseum CBS 118893]
 gi|311341552|gb|EFR00755.1| autophagy-like protein 3 [Arthroderma gypseum CBS 118893]
          Length = 358

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 258 INSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPT-WQWASGDESKA 316
           +N ++     + + L P+   S FR TG VTPEEFV AGD+LV+  PT    A+   SK 
Sbjct: 1   MNVIRSKLNDIRDRLAPISHVSTFRSTGQVTPEEFVRAGDYLVYKFPTWSWSAASSPSKR 60

Query: 317 KSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENE 354
            +YLP  KQFL+T+ VPC RR  +    +    II+ E
Sbjct: 61  VAYLPEGKQFLVTRGVPCNRRLDENFAGKAADIIIQGE 98



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPC+HA VMK +++
Sbjct: 206 PLPPHLMMEDIVGDYKDKTVTLEDFPFFEGGVKMASVHPCKHASVMKVLLD 256



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 12/109 (11%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPC------RAIKSKASNQTQSCNKPNST 156
           M ED+  DY  KTVT+E  P   G   MAS+HPC      + +  +A    +   +  S 
Sbjct: 212 MMEDIVGDYKDKTVTLEDFPFFEGGVKMASVHPCKHASVMKVLLDRADAALKIRREKQSK 271

Query: 157 EEEDDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQEC 205
             +D  D+    +E     G +DE +    +   + +  SS AGD  E 
Sbjct: 272 RSKDGKDKVEAGLE-----GLVDETEKLKVSGDDKPKGSSSSAGDEWEV 315



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query: 202 SQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           +Q+ G     RTY L+ITY  YY+TPRL+L GY
Sbjct: 168 AQKDGKNAPLRTYSLYITYTPYYKTPRLYLSGY 200


>gi|67609529|ref|XP_667031.1| autophagocytosis protein [Cryptosporidium hominis TU502]
 gi|54658126|gb|EAL36807.1| autophagocytosis protein [Cryptosporidium hominis]
          Length = 242

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPV-LKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD 312
           MQS+ + +      V     P+    SKF   G +TP+EFV +GD+L+   P W W S  
Sbjct: 1   MQSITHRLADQFRSVVGNFIPIDCSNSKFESDGFLTPKEFVDSGDYLILQFPNWFWRSAS 60

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI-IENEQDEEGWV 361
           E     +LP NKQ+L   NVPC +R      C  K    I ++   + W+
Sbjct: 61  EEYIVRWLPQNKQYLHVDNVPCRKRLDSSKLCISKNSFDITSDNKGDEWI 110



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 12/96 (12%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G N +G     PL+ ++M ED+  DYA KT+T++ HP   G    SIHPC H+ ++KK+
Sbjct: 150 FGYNKEG----YPLSTEEMVEDIISDYATKTITLDPHP-FTGILCVSIHPCNHSSLLKKM 204

Query: 61  IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
                        H+ ++I LKF+ +VIP+IE D T
Sbjct: 205 -------AKNHPPHLSIVILLKFITTVIPSIELDNT 233



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 16/26 (61%), Positives = 23/26 (88%)

Query: 211 TRTYDLHITYDKYYQTPRLWLYGYNE 236
            R YD+ +TYDK++QTPR+WL+GYN+
Sbjct: 129 VRYYDISVTYDKFFQTPRIWLFGYNK 154



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQ 146
            + ++M ED+  DYA KT+T++ HP   G    SIHPC     +K  A N 
Sbjct: 159 LSTEEMVEDIISDYATKTITLDPHP-FTGILCVSIHPCNHSSLLKKMAKNH 208


>gi|296411731|ref|XP_002835583.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629369|emb|CAZ79740.1| unnamed protein product [Tuber melanosporum]
          Length = 252

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 46/79 (58%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSY 319
           ++  T + + EY++     S F  TG +TPEEFV AGD LV+  PTW W      K+ ++
Sbjct: 2   NLYSTIMSIQEYISSPSHTSTFTSTGQLTPEEFVDAGDFLVYKFPTWSWQPAAPGKSVTH 61

Query: 320 LPPNKQFLITKNVPCPRRC 338
           LP NKQFL  ++ PC  R 
Sbjct: 62  LPENKQFLKLRHAPCHSRL 80



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 28/105 (26%)

Query: 22  DVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG------------- 68
           D++ DY +KTVT+E  P   G  MA++HPC+HAE MK+I +++L                
Sbjct: 149 DIAPDYREKTVTIEEFPP-EGTLMATVHPCKHAEAMKRIFDSMLRRKEREEWEEVPPANS 207

Query: 69  --------------GELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
                           L V  Y+I+F+KF+  V+P +E D+T + 
Sbjct: 208 EDKEDETAVRVDIDSGLRVDQYMIVFVKFIAGVVPGVEMDYTMSI 252


>gi|443896078|dbj|GAC73422.1| protein involved in autophagocytosis during starvation [Pseudozyma
           antarctica T-34]
          Length = 401

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 39/57 (68%)

Query: 286 VVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCKQID 342
           V   +EFVAAGD L +  PTWQW +G  SKA+ YLP +KQFLI+  VP  RR  QI+
Sbjct: 7   VRIADEFVAAGDFLSYKFPTWQWCAGSPSKARDYLPKDKQFLISCGVPSLRRVSQIE 63



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 19/77 (24%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPP---------------M 45
           +G +  GV    PL   Q++EDVS DYA+KTVT+E  PH    P                
Sbjct: 232 VGYDEHGV----PLKPAQIFEDVSSDYAQKTVTIEPFPHGHAGPDSSASSSSASAAGVAT 287

Query: 46  ASIHPCRHAEVMKKIIE 62
           ASIHPC+HA VMKK+IE
Sbjct: 288 ASIHPCKHASVMKKVIE 304



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 3/41 (7%)

Query: 196 SSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           ++ AGD+   G ++  R YD  ITYDKYYQTPR+WL GY+E
Sbjct: 199 NTSAGDN---GKLLSVRKYDCIITYDKYYQTPRMWLVGYDE 236


>gi|66359970|ref|XP_627163.1| APG10/ Aut1p like like autophagocytosis protein involved in
           vacuolar transport [Cryptosporidium parvum Iowa II]
 gi|46228580|gb|EAK89450.1| APG10/ Aut1p like like autophagocytosis protein involved in
           vacuolar transport [Cryptosporidium parvum Iowa II]
          Length = 242

 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 254 MQSVINSVKGTALGVAEYLTPV-LKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD 312
           MQS+ + +      V     P+    SKF   G +TP+EFV +GD+L+   P W W S  
Sbjct: 1   MQSITHRLADQFRSVVGNFIPIDCSNSKFESDGFLTPKEFVDSGDYLILQFPNWFWRSAS 60

Query: 313 ESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKI-IENEQDEEGWV 361
           E     +LP NKQ+L   NVPC +R      C  K  + I ++   + W+
Sbjct: 61  EEYIVRWLPQNKQYLHIDNVPCRKRLDSSKLCISKNCLDITSDSKGDEWI 110



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 12/96 (12%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G N +G     PL+ ++M ED+  DYA KT+T++ HP   G    SIHPC H+ ++KK+
Sbjct: 150 FGYNKEG----YPLSTEEMVEDIISDYATKTITLDPHP-FTGILCVSIHPCNHSSLLKKM 204

Query: 61  IETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFT 96
                        H+ ++I LKF+ +VIP+IE D T
Sbjct: 205 -------AKNHPPHLSIVILLKFITTVIPSIELDNT 233



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 26/84 (30%)

Query: 179 DEQDPSIANIPPEKQSPSSPAGDSQECGDIVR--------------------------TR 212
           ++Q   I N+P  K+  SS    S+ C DI                             R
Sbjct: 71  NKQYLHIDNVPCRKRLDSSKLCISKNCLDITSDSKGDEWILPTNENVEKLGNININDDVR 130

Query: 213 TYDLHITYDKYYQTPRLWLYGYNE 236
            YD+ +TYDK++QTPR+WL+GYN+
Sbjct: 131 YYDISVTYDKFFQTPRIWLFGYNK 154



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR---AIKSKASNQ 146
            + ++M ED+  DYA KT+T++ HP   G    SIHPC     +K  A N 
Sbjct: 159 LSTEEMVEDIISDYATKTITLDPHP-FTGILCVSIHPCNHSSLLKKMAKNH 208


>gi|84043456|ref|XP_951518.1| autophagocytosis associated protein [Trypanosoma brucei TREU927]
 gi|33348321|gb|AAQ15647.1| autophagocytosis associated protein, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
 gi|62358726|gb|AAX79182.1| autophagocytosis associated protein, putative [Trypanosoma brucei]
          Length = 292

 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 10/93 (10%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PLT  +M EDV     ++TV+++ HP L    + SIHPCRHAE M+++I+ + +   E  
Sbjct: 196 PLTTSEMMEDVYPVNRERTVSIDPHPFLQAACI-SIHPCRHAETMRRMIQHMKQRFEESS 254

Query: 71  -------LGVHMYLIIFLKFVQSVIPTIEYDFT 96
                     HM L +FLKF+ S +P+IEYD +
Sbjct: 255 PETAKFVFPTHMALFLFLKFISSAVPSIEYDLS 287



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 12/85 (14%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
            + V NSV G           V   S F ETG +TP EF+ AGD L+H  P W WA G E
Sbjct: 10  FKKVYNSVVG-----------VKTTSSFHETGTLTPMEFIQAGDELLHKMPVWSWAEGPE 58

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRC 338
           +  + +LPPNK++L+ +  PC  R 
Sbjct: 59  N-IQPFLPPNKKYLVYRGAPCYERA 82



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 22/27 (81%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           R R YD+++ YD+YYQTPR++L GY E
Sbjct: 165 RCRLYDVYMVYDQYYQTPRIFLIGYAE 191


>gi|261326373|emb|CBH09332.1| autophagocytosis associated protein, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 293

 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 10/93 (10%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE-- 70
           PLT  +M EDV     ++TV+++ HP L    + SIHPCRHAE M+++I+ + +   E  
Sbjct: 197 PLTTSEMMEDVYPVNRERTVSIDPHPFLQAACI-SIHPCRHAETMRRMIQHMKQRFEESS 255

Query: 71  -------LGVHMYLIIFLKFVQSVIPTIEYDFT 96
                     HM L +FLKF+ S +P+IEYD +
Sbjct: 256 PETAKFVFPTHMALFLFLKFISSAVPSIEYDLS 288



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 12/85 (14%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
            + V NSV G           V   S F ETG +TP EF+ AGD L+H  P W WA G E
Sbjct: 10  FKKVYNSVVG-----------VKTTSSFHETGTLTPMEFIQAGDELLHKMPVWSWAEGPE 58

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRC 338
           +  + +LPPNK++L+ +  PC  R 
Sbjct: 59  N-IQPFLPPNKKYLVYRGAPCYERA 82



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 22/27 (81%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           R R YD+++ YD+YYQTPR++L GY E
Sbjct: 166 RCRLYDVYMVYDQYYQTPRIFLIGYAE 192


>gi|449525357|ref|XP_004169684.1| PREDICTED: autophagy-related protein 3-like [Cucumis sativus]
          Length = 279

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELG 72
           PL  + ++EDV Q +  KTV +E HP+LPG   AS+HP  H   +KK+++  +  G    
Sbjct: 193 PLQPELIFEDVRQSHVGKTVNIEDHPYLPGK-HASVHPKIHGAAVKKMVKCRMSQGNVPE 251

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQNF 99
           V   L +FL+FV SV PTI+YD    F
Sbjct: 252 VSKCLSLFLEFVASVFPTIKYDCNIGF 278



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 37/55 (67%)

Query: 283 ETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRR 337
           +T V T  +F+ AG+ LV +  +W W SGD SK KS LP +KQFLI +N PC RR
Sbjct: 17  KTIVFTEADFITAGNFLVGNSDSWSWESGDLSKQKSNLPSDKQFLILRNAPCLRR 71



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           DI+  RTYD+ ITYD  +QT R WL GY+E
Sbjct: 160 DIICLRTYDISITYDNDHQTFRFWLTGYHE 189



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHP 135
           ++EDV Q +  KTV +E HP+LPG   AS+HP
Sbjct: 199 IFEDVRQSHVGKTVNIEDHPYLPG-KHASVHP 229


>gi|82541260|ref|XP_724883.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23479689|gb|EAA16448.1| unnamed protein product-related [Plasmodium yoelii yoelii]
          Length = 159

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 158 EEDDDDEEALDMEDFE-ESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDIVRTRTYDL 216
           E+D+DDEE +D+ +F+ E   + E DP  A I P +    +   D     +I+  R+YD+
Sbjct: 18  EKDNDDEEVIDINNFDMEKDIIKEYDP--AAIDPSRLYLETFGND-----NIINIRSYDI 70

Query: 217 HITYDKYYQTPRLWLYGYNE 236
            ITYDKYY+TPR+WL+GYNE
Sbjct: 71  SITYDKYYETPRIWLFGYNE 90



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           ++R PL  ++++ED+  DY+ KTVT ESHP   G   ASIHPC+HAE+M  +I   +  G
Sbjct: 90  ENRHPLKSEEIFEDILSDYSYKTVTYESHP-CTGIMTASIHPCKHAEIMLNVINNWIGEG 148

Query: 69  GE 70
            E
Sbjct: 149 KE 150



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 102 DQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
           ++++ED+  DY+ KTVT ESHP   G   ASIHPC+
Sbjct: 98  EEIFEDILSDYSYKTVTYESHP-CTGIMTASIHPCK 132


>gi|323445078|gb|EGB01881.1| hypothetical protein AURANDRAFT_9966 [Aureococcus
          anophagefferens]
          Length = 87

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)

Query: 9  KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETV 64
          ++ APLT  Q++ED+  DYAK+TVT E HPHL   P ASIHPC+H   MKKII+ V
Sbjct: 31 EASAPLTQPQIFEDILSDYAKRTVTFERHPHL-DHPHASIHPCKHPNAMKKIIDNV 85



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 29/30 (96%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           +I+RTRTYDL ITYDKY+QTPR+WL+GY+E
Sbjct: 2   NILRTRTYDLSITYDKYWQTPRMWLFGYDE 31



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 99  FTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCR 137
            T  Q++ED+  DYAK+TVT E HPHL   P ASIHPC+
Sbjct: 36  LTQPQIFEDILSDYAKRTVTFERHPHL-DHPHASIHPCK 73


>gi|134274473|emb|CAJ87065.1| truncated Aut1 protein [Trypanosoma brucei gambiense]
          Length = 143

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 275 VLKESK-FRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVP 333
           VLK  + F ETG +TP EF+ AGD L+H  P W WA G E+  + +LPPNK++L+ +  P
Sbjct: 13  VLKRLQSFHETGTLTPMEFIQAGDELLHKMPVWSWAEGPEN-IQPFLPPNKKYLVYRGAP 71

Query: 334 CPRRC 338
           C  R 
Sbjct: 72  CYERA 76


>gi|209877128|ref|XP_002140006.1| autophagocytosis associated protein [Cryptosporidium muris RN66]
 gi|209555612|gb|EEA05657.1| autophagocytosis associated protein, putative [Cryptosporidium
           muris RN66]
          Length = 249

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 8/100 (8%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII 61
           G N  G+    PL   ++ +D+  +Y +KT+T++ HP   G    SIHPC+H+++ KKI 
Sbjct: 156 GYNQDGI----PLDPKEIVQDIMSEYTEKTITIDPHP-CTGISCISIHPCKHSDIFKKI- 209

Query: 62  ETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTV 101
              L     +   M ++I LKF+ SVIPTIE D T +  +
Sbjct: 210 --ALRNRTPIKHEMAIVILLKFLSSVIPTIELDHTIDVNI 247



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 4/118 (3%)

Query: 254 MQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDE 313
           M S+ + +      +  + TP+ ++S+F   G+++P EFV AGD+     P W+W S ++
Sbjct: 1   MYSLQHRLAENIRSIISHFTPISQDSRFNSDGLISPSEFVDAGDYTTLQFPKWKWRSAEK 60

Query: 314 SKAKSYLPPNKQFLITKNVPCPRRCKQIDY---CEE-KQKIIENEQDEEGWVDTHHYD 367
                +LP NKQ+L  +++   +R K I+    C E K+  I +E + + + +T++ D
Sbjct: 61  GFEVPWLPKNKQYLYIQDIASRKRIKDIETTYNCNEYKEWTIAHEINSDNFHNTNYTD 118



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query: 210 RTRTYDLHITYDKYYQTPRLWLYGYNE 236
           R RTYD+ ITYDKY+Q PR+WLYGYN+
Sbjct: 133 RLRTYDISITYDKYFQIPRMWLYGYNQ 159


>gi|440798153|gb|ELR19221.1| Autophagyrelated protein 3, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 230

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 18/83 (21%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGELGV 73
           LT +Q++ D+SQD+A+KTVT+++HPH+                  +II    E G E  V
Sbjct: 161 LTPNQVFMDISQDHAQKTVTIDTHPHM------------------QIILRQAECGKESRV 202

Query: 74  HMYLIIFLKFVQSVIPTIEYDFT 96
             YL +FLKF+ +VIPTIEYD+T
Sbjct: 203 DQYLFLFLKFLSAVIPTIEYDYT 225



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 38/50 (76%)

Query: 191 EKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNERFKG 240
           E + PS+ A + ++   I++TRTYD+ ITYDKYYQTP++WL+GY+E   G
Sbjct: 111 EDEDPSALAKEPEDSDLILKTRTYDISITYDKYYQTPKVWLFGYDENGNG 160



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 7/59 (11%)

Query: 310 SGDESKAKSYLPPNKQFLITKNVPCPRRC----KQIDYCEEKQKIIENEQDEEGWVDTH 364
            GD +KA  YLP +KQFLIT+ VPC  R     K  +  + +  +I+    +EGWV+TH
Sbjct: 4   GGDPAKAVPYLPKDKQFLITRKVPCLMRAAALEKSANEAQNQDIVIDG---DEGWVETH 59



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 27/34 (79%), Gaps = 1/34 (2%)

Query: 93  YDFTQN-FTVDQMYEDVSQDYAKKTVTMESHPHL 125
           YD   N  T +Q++ D+SQD+A+KTVT+++HPH+
Sbjct: 154 YDENGNGLTPNQVFMDISQDHAQKTVTIDTHPHM 187


>gi|145532088|ref|XP_001451805.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419471|emb|CAK84408.1| unnamed protein product [Paramecium tetraurelia]
          Length = 241

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 4/86 (4%)

Query: 14  LTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGG-ELG 72
           LT  ++ EDVS +YA KTVT E+   L    + +IHPC+HA+ +K  ++ + + G  E  
Sbjct: 152 LTYQEVKEDVSGEYADKTVTEENFLEL-NIKLPTIHPCKHADTLKFFVDQMRDNGCPEEK 210

Query: 73  VH--MYLIIFLKFVQSVIPTIEYDFT 96
           +H    L IFLKF+ SVIPTI++DF 
Sbjct: 211 IHPDNSLTIFLKFMNSVIPTIQFDFV 236



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)

Query: 265 ALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQW--ASGDESKAKSYLPP 322
           A+G A    P   +S F   G++TPEEF+ AGD L+ +   W+W  A  D+ K K YLP 
Sbjct: 15  AVGAALIAPPT--KSVFLTKGMLTPEEFINAGDRLISNGGNWKWCKAISDQYKNK-YLPN 71

Query: 323 NKQFLITKNVPCPRRCKQID 342
           +KQFLI +N+   +R K ++
Sbjct: 72  DKQFLIQENIISYKRIKDLN 91


>gi|449458419|ref|XP_004146945.1| PREDICTED: autophagy-related protein 3-like [Cucumis sativus]
          Length = 213

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 283 ETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCKQID 342
           +T V T  +F+ AG+ LV +  +W W SGD SK KS LP +KQFLI +N PC RR     
Sbjct: 17  KTIVFTEADFITAGNFLVGNSDSWSWESGDLSKQKSNLPSDKQFLILRNAPCLRRA--FS 74

Query: 343 YCEE 346
           Y EE
Sbjct: 75  YKEE 78



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)

Query: 207 DIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           DI+  RTYD+ ITYD  +QT R WL GY+E
Sbjct: 160 DIICLRTYDISITYDNDHQTFRFWLTGYHE 189


>gi|115433586|ref|XP_001216930.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189782|gb|EAU31482.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 257

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 59/149 (39%), Gaps = 65/149 (43%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKII---------- 61
           PL    M ED+  DY  KTVT+E  P   G   MA++HPCRHA VMK ++          
Sbjct: 106 PLPPHLMMEDIVGDYKDKTVTLEDFPWFEGNVKMATVHPCRHASVMKTLLDRADAALKLR 165

Query: 62  --------------------ETVLEG--------------------GGE----------- 70
                               E+ LEG                    GGE           
Sbjct: 166 REKLKQAQTDPSAAKVPSANESGLEGLVDDVNQLSVKEQPQQQDKAGGEEWEVLQHDEEE 225

Query: 71  ---LGVHMYLIIFLKFVQSVIPTIEYDFT 96
              + V  YL++FLKF+ SV P IE+DFT
Sbjct: 226 QVAIRVDQYLVVFLKFIASVTPGIEHDFT 254



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 6/37 (16%)

Query: 198 PAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGY 234
           PAG +Q       TRTY+L+ITY  +Y+TPRL+L GY
Sbjct: 70  PAGTTQP------TRTYNLYITYANFYRTPRLYLSGY 100



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MA++HPCR
Sbjct: 112 MMEDIVGDYKDKTVTLEDFPWFEGNVKMATVHPCR 146


>gi|440635014|gb|ELR04933.1| hypothetical protein GMDG_00191 [Geomyces destructans 20631-21]
          Length = 362

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKII 61
           PL  + M ED+  DY +KTVT+E+ PH+ G    SIHPCRHA VMK ++
Sbjct: 216 PLPPNLMMEDIMGDYREKTVTIENFPHMDGLKTVSIHPCRHASVMKSLM 264



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 19/144 (13%)

Query: 260 SVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWAS-GDESKAKS 318
           S++     + + +   ++ + F ETG +  ++F AAGD+L    P+WQW      +K   
Sbjct: 11  SIRSAMGNIRDRVAESVEHADFFETGQIGTKDFEAAGDYLTTKFPSWQWYQPAKLTKPVD 70

Query: 319 YLPPNKQFLITKNVPCPRRCKQ-IDYCEEKQ--KIIENE------------QDEEGWVDT 363
            L P K  L    VPC +R         E+Q  ++++ E             DE+GWV T
Sbjct: 71  KLDPKKHILKYVGVPCHQRLNDTFQGVSEQQETRVVDGEDFQNGANSGTPGDDEDGWVKT 130

Query: 364 HHY---DETTGKDIAIEDKISEIS 384
            +     E  G+D+   D+   + 
Sbjct: 131 ANLAASQERRGRDVRTLDESGNLG 154



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRAIKSKASNQTQSCNKPNST 156
           M ED+  DY +KTVT+E+ PH+ G    SIHPCR     AS      N+ NS 
Sbjct: 222 MMEDIMGDYREKTVTIENFPHMDGLKTVSIHPCR----HASVMKSLMNRANSA 270


>gi|154271524|ref|XP_001536615.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409285|gb|EDN04735.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 253

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 13  PLTVDQMYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCRHAEVMKKIIE 62
           PL    M ED+  DY  KTVT+E  P   G   MAS+HPCRHA VMK +++
Sbjct: 87  PLAPHLMMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCRHASVMKVLLD 137



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGY 234
           RTY L+ITY  YY+TPRL+L GY
Sbjct: 59  RTYTLYITYSPYYRTPRLYLSGY 81



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 104 MYEDVSQDYAKKTVTMESHPHLPGP-PMASIHPCR 137
           M ED+  DY  KTVT+E  P   G   MAS+HPCR
Sbjct: 93  MMEDIVGDYKDKTVTLEDFPFFDGGVKMASVHPCR 127



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 73  VHMYLIIFLKFVQSVIPTIEYDFTQN 98
           V  YL++FLKF+ SV P IE+DFT  
Sbjct: 227 VDQYLVVFLKFIASVTPGIEHDFTMG 252


>gi|413916947|gb|AFW56879.1| hypothetical protein ZEAMMB73_414409 [Zea mays]
          Length = 239

 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 33/50 (66%)

Query: 21  EDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
            D++Q    + VT+E HPHL     AS+HPC+HA VMKKII+  + GG E
Sbjct: 110 HDLTQTDPARKVTIEDHPHLLAGKHASVHPCKHAAVMKKIIDVPMSGGVE 159


>gi|70952698|ref|XP_745500.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56525841|emb|CAH77845.1| hypothetical protein PC104171.00.0 [Plasmodium chabaudi chabaudi]
          Length = 86

 Score = 52.4 bits (124), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 34/57 (59%)

Query: 52  RHAEVMKKIIETVLEGGGELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVDQMYEDV 108
           RHAE+M  +I   +  G E    +YL+  LKF+  VIPTIEYDFT +  +  +  ++
Sbjct: 18  RHAEIMLNVINNWIAEGKEPRHDLYLLFLLKFISGVIPTIEYDFTTDIEIPSLTNNL 74


>gi|413942768|gb|AFW75417.1| hypothetical protein ZEAMMB73_781725 [Zea mays]
          Length = 396

 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 29/43 (67%)

Query: 28 AKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
          A   VT+E H HL    +AS+HPC+HA VMKKII+  + GG E
Sbjct: 10 ALAQVTIEDHHHLLAGKLASVHPCKHAAVMKKIIDVPMSGGVE 52


>gi|413942767|gb|AFW75416.1| hypothetical protein ZEAMMB73_781725 [Zea mays]
          Length = 575

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 29/43 (67%)

Query: 28 AKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGGGE 70
          A   VT+E H HL    +AS+HPC+HA VMKKII+  + GG E
Sbjct: 10 ALAQVTIEDHHHLLAGKLASVHPCKHAAVMKKIIDVPMSGGVE 52


>gi|297805412|ref|XP_002870590.1| hypothetical protein ARALYDRAFT_915972 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316426|gb|EFH46849.1| hypothetical protein ARALYDRAFT_915972 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 235

 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 2/48 (4%)

Query: 319 YLPPNKQFLITKNVPCPRRCKQI--DYCEEKQKIIENEQDEEGWVDTH 364
           YLP +KQFLIT+NVPC RR   +  +Y     +++ +++D +GW+ TH
Sbjct: 71  YLPSDKQFLITRNVPCLRRAASVAEEYEAAGGEVLVDDEDNDGWLATH 118


>gi|71027271|ref|XP_763279.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350232|gb|EAN30996.1| hypothetical protein TP03_0261 [Theileria parva]
          Length = 197

 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKK 59
           G N  G+    PL+ D+M+EDV + Y  KTVT+E HP   G    ++HPC   E++K+
Sbjct: 138 GYNQFGL----PLSKDEMFEDVPEVYVGKTVTVERHP-FTGFLNLTVHPCNQKEIVKR 190



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/25 (64%), Positives = 19/25 (76%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNE 236
           RTY L ITYD+Y +T R WL GYN+
Sbjct: 117 RTYSLTITYDRYNETARFWLRGYNQ 141



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query: 285 GVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPC 334
           G +    FV  GD LV     W+WA   +S   + LP +KQ+L   NV C
Sbjct: 27  GSLNTSNFVEYGDGLVSINKRWRWAGKTQSMYDTNLPEDKQYLYCDNVAC 76


>gi|85000463|ref|XP_954950.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65303096|emb|CAI75474.1| hypothetical protein, conserved [Theileria annulata]
          Length = 203

 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMK 58
           G N  G+    PL+ D+M+EDV + Y  KTVT+E HP   G    ++HPC   E++K
Sbjct: 138 GYNQFGL----PLSKDEMFEDVPEVYVGKTVTVERHP-FTGFLNLTVHPCNQKEIVK 189



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 26/55 (47%)

Query: 285 GVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCK 339
           G +    FV  GD LV     W+WA    S   S LP +KQ+L   NV C R  K
Sbjct: 27  GSLNTSNFVEYGDDLVSINKQWKWAGKTPSMFDSNLPEDKQYLCCDNVACLRLLK 81



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 16/25 (64%), Positives = 19/25 (76%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNE 236
           RTY L ITYD+Y +T R WL GYN+
Sbjct: 117 RTYSLTITYDRYNETARFWLRGYNQ 141


>gi|428672062|gb|EKX72977.1| conserved hypothetical protein [Babesia equi]
          Length = 186

 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 16/25 (64%), Positives = 24/25 (96%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNE 236
           R+YD+ ITYD+YY+TPR+WL+G+N+
Sbjct: 102 RSYDISITYDRYYETPRIWLFGFNQ 126



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 1   MGANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKI 60
            G N  G+    P+T D+M  D+  +Y  KTVT E HP   G    +IHPC   + M K+
Sbjct: 122 FGFNQLGL----PITKDEMLTDIPTEYIGKTVTAERHP-FTGRLNLTIHPCYQIDAMNKL 176


>gi|449267851|gb|EMC78747.1| Autophagy-related protein 10 [Columba livia]
          Length = 226

 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 13/84 (15%)

Query: 13  PLTVDQMYEDVSQDYAKK-------TVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVL 65
           PLT+D+++  V   Y  +       T+T + HP L G P   +HPCR  E M     +VL
Sbjct: 124 PLTLDEIWRSVHTCYQARLLEGSWDTITQQEHP-LLGQPFFVLHPCRTNEFMS----SVL 178

Query: 66  EGGGELGVHM-YLIIFLKFVQSVI 88
            G  +   HM Y+I++L  V  V+
Sbjct: 179 TGTRKQNRHMNYIILWLSTVGPVV 202


>gi|403223191|dbj|BAM41322.1| uncharacterized protein TOT_030000585 [Theileria orientalis strain
           Shintoku]
          Length = 219

 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)

Query: 2   GANNQGVKSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVM 57
           G N  G+    PLT D+M EDV + Y  K+VT+E HP   G    ++HPC   E++
Sbjct: 141 GYNQFGL----PLTKDEMLEDVPEAYVGKSVTVEKHP-FTGYLTLTVHPCNQKEIV 191



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query: 212 RTYDLHITYDKYYQTPRLWLYGYNE 236
           R YD+ +TYD+Y +TPRLWL GYN+
Sbjct: 120 RKYDMSVTYDRYNETPRLWLRGYNQ 144



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%)

Query: 285 GVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLITKNVPCPRRCK 339
           G +   +F+A GD LV     W+WA    S   S LP +KQ+L ++ V C +  K
Sbjct: 27  GSLNVNDFIAHGDVLVEVNKIWKWAGRSASTYDSNLPDDKQYLHSERVVCLKGIK 81


>gi|82541262|ref|XP_724884.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23479690|gb|EAA16449.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 103

 Score = 43.9 bits (102), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 16/64 (25%)

Query: 311 GDESKAKSYLPPNKQFLITKNVPCPRRCKQIDYCEEKQKIIENEQDEEGWVDTHHYDETT 370
            DE++A  YLP  KQFLI++NVPC  R            IIENE     W+  +  DE  
Sbjct: 33  ADENRAVPYLPEKKQFLISRNVPCKHR-----------DIIENE-----WIYPNFEDENN 76

Query: 371 GKDI 374
             DI
Sbjct: 77  NSDI 80


>gi|62321484|dbj|BAD94924.1| autophagocytosis protein - like [Arabidopsis thaliana]
          Length = 42

 Score = 43.5 bits (101), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/32 (62%), Positives = 24/32 (75%)

Query: 68 GGELGVHMYLIIFLKFVQSVIPTIEYDFTQNF 99
          G E  V  YL +FLKF+ SVIPTIEYD+T +F
Sbjct: 4  GVEPEVDKYLFLFLKFMASVIPTIEYDYTMDF 35


>gi|351695412|gb|EHA98330.1| Autophagy-related protein 3 [Heterocephalus glaber]
          Length = 176

 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 8/59 (13%)

Query: 172 FEESGFLDEQDPSIAN---IPPEKQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTP 227
           +EESG L+  + ++     + P K    +   D+     +++TRTY+L+ITYDKYYQTP
Sbjct: 123 YEESGLLETDEATLDTRKIVEPCKAKTDAGGEDA-----VLQTRTYNLYITYDKYYQTP 176


>gi|256078979|ref|XP_002575769.1| hypothetical protein [Schistosoma mansoni]
 gi|360044020|emb|CCD81566.1| hypothetical protein Smp_044470 [Schistosoma mansoni]
          Length = 269

 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 13/120 (10%)

Query: 9   KSRAPLTVDQMYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVLEGG 68
           + R  + +      +  D+  KTVT E   +L    + +I   +   VM+++I+   + G
Sbjct: 8   RERIMMAIRHTNIHLDMDHVTKTVTTE-FLNLFSHMLPAIFSFKLVGVMRELIKATADSG 66

Query: 69  GELGVHMYLIIFLKFVQSVIPTIEYDFTQNFTVDQMYEDVSQDYAKKTVTMESHPHLPGP 128
            EL VH YL+++L FV +VI            +  + E +   Y     TM S+   P P
Sbjct: 67  TELAVHQYLMVYLIFVHAVI------------LQDLLETLMHVYFTFLRTMGSNEEYPSP 114


>gi|342179968|emb|CCC89442.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 130

 Score = 42.7 bits (99), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 8/45 (17%)

Query: 192 KQSPSSPAGDSQECGDIVRTRTYDLHITYDKYYQTPRLWLYGYNE 236
           +  P  P  D ++C      R YD+ +TYD+YYQTPR++L GY E
Sbjct: 92  RAKPDGP--DQRQC------RLYDVCMTYDQYYQTPRIFLLGYEE 128


>gi|444728501|gb|ELW68958.1| Ubiquitin-like-conjugating enzyme ATG3 [Tupaia chinensis]
          Length = 185

 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 31/37 (83%)

Query: 19  MYEDVSQDYAKKTVTMESHPHLPGPPMASIHPCRHAE 55
           +YED+SQ++ KKTVT+E+HPHL  PP+  + PC+HAE
Sbjct: 117 LYEDISQNHGKKTVTVENHPHLSPPPVCPVRPCKHAE 153



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 15/22 (68%), Positives = 21/22 (95%)

Query: 104 MYEDVSQDYAKKTVTMESHPHL 125
           +YED+SQ++ KKTVT+E+HPHL
Sbjct: 117 LYEDISQNHGKKTVTVENHPHL 138


>gi|399215999|emb|CCF72687.1| unnamed protein product [Babesia microti strain RI]
          Length = 209

 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 253 RMQSVINSVKGTALGVAEYLTPVLKESKFRETGVVTPEEFVAAGDHLVHHCPTWQWASGD 312
           R Q  + SV G     A    P   E  F  +G  + ++F+ AGD LV+    W+W    
Sbjct: 3   RFQEAVRSVIG-----ALRFEP---EDDFSSSGRFSIKDFLEAGDSLVNLDIGWEWMCAK 54

Query: 313 ESKAKSYLPPNKQFLITKNV 332
           ES    YLP  K +L   N+
Sbjct: 55  ESFEIDYLPLEKHYLSKNNI 74


>gi|345304726|ref|XP_001511905.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like
           [Ornithorhynchus anatinus]
          Length = 394

 Score = 41.6 bits (96), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 11/83 (13%)

Query: 13  PLTVDQMYEDVSQDYAKK-------TVTMESHPHLPGPPMASIHPCRHAEVMKKIIETVL 65
           PLT+++++E V + Y  +       T+T + HP L G P   +HPCR  E M  I+   L
Sbjct: 296 PLTLNEIWERVHECYRTRVLQEPWNTITQQEHPLL-GQPFFVLHPCRTNEFMTSILANSL 354

Query: 66  EGGGELGVHMYLIIFLKFVQSVI 88
           +    +    Y+  +L  V  V+
Sbjct: 355 KANRNVN---YITSWLSVVGPVV 374


>gi|334325782|ref|XP_001369490.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like
           [Monodelphis domestica]
          Length = 172

 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 8/57 (14%)

Query: 13  PLTVDQMYEDVSQDYAKK-------TVTMESHPHLPGPPMASIHPCRHAEVMKKIIE 62
           PLT+ ++++DV Q Y  +       T+T + HP L G P   +HPC+ +E M  ++E
Sbjct: 74  PLTLKEIWDDVHQFYKIRLLQEPWSTITQQEHPLL-GQPFFVLHPCKTSEFMTSLLE 129


>gi|375139047|ref|YP_004999696.1| type VII secretion protein EccCb [Mycobacterium rhodesiae NBB3]
 gi|359819668|gb|AEV72481.1| type VII secretion protein EccCb [Mycobacterium rhodesiae NBB3]
          Length = 586

 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 28/192 (14%)

Query: 101 VDQMYEDVSQDYAKKTVTMESHPHLPG-PPMASIHPCRAIKSKASNQTQSCNKPNSTEEE 159
           +D++  ++ Q+   + V+ME H  + G P +  +H    + +  S   Q+ +  N+    
Sbjct: 261 IDRITREIPQNRPGRAVSMEKHHLMMGVPRLDGVHSAEDLVAAMSEAVQTISAQNT---- 316

Query: 160 DDDDEEALDMEDFEESGFLDEQDPSIANIPPEKQSPSSPAGDSQECGDI-VRTRTYDLHI 218
               E+A  +    E  +L E DP+          P  P  D +    + +  R  DL +
Sbjct: 317 ----EQAPKVRVLPERIYLHELDPN----------PPGPDSDYRTRWTVPMGVREADLSV 362

Query: 219 TYDKYYQTPRLWLYGYNERFKGKENLVLISKWCNRMQSVINSVKGTALGVAEYLTPVL-- 276
            Y+  + TP L ++G  +  K +    +    C R     NS       +A++ + +L  
Sbjct: 363 AYNPMHMTPHLLIFGAPKSGKTRIAHAVAQAICAR-----NSPAQVRFMLADFRSGLLDA 417

Query: 277 -KESKFRETGVV 287
             ES   + G V
Sbjct: 418 VPESHLLDAGAV 429


>gi|327263032|ref|XP_003216325.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Anolis
           carolinensis]
          Length = 224

 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 8/58 (13%)

Query: 13  PLTVDQMYEDVSQDYAKK-------TVTMESHPHLPGPPMASIHPCRHAEVMKKIIET 63
           PLT+D++++ V + Y ++       T+T + HP L G P   +HPCR  + M  ++ +
Sbjct: 126 PLTLDEIWKGVPECYKERLWQGPWDTITQQEHP-LLGQPFFVLHPCRTNQFMSSVLSS 182


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.131    0.394 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,132,256,187
Number of Sequences: 23463169
Number of extensions: 316444013
Number of successful extensions: 1084324
Number of sequences better than 100.0: 578
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 1079841
Number of HSP's gapped (non-prelim): 3105
length of query: 420
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 275
effective length of database: 8,957,035,862
effective search space: 2463184862050
effective search space used: 2463184862050
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)