RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4303
         (420 letters)



>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase
           IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]}
          Length = 383

 Score = 27.7 bits (61), Expect = 2.9
 Identities = 6/49 (12%), Positives = 16/49 (32%), Gaps = 4/49 (8%)

Query: 280 KFRETGVVTPEEFVAAGDHLVHHCPTWQWASGDESKAKSYLPPNKQFLI 328
             RE   +  +++  +    V         S      +     +++F+I
Sbjct: 72  NLRERFGIDDQDYQNS----VTRSAPINSDSQGRCGTRFLTTYDRRFVI 116


>d1nh8a1 c.94.1.1 (A:1-210) ATP phosphoribosyltransferase
           (ATP-PRTase, HisG), catalytic domain {Mycobacterium
           tuberculosis [TaxId: 1773]}
          Length = 210

 Score = 26.9 bits (59), Expect = 4.5
 Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 7/89 (7%)

Query: 177 FLDEQDPSIANIPPEKQSPSSPA-GDSQECGDIVRT----RTYDLHITYDKYYQTPRLWL 231
            L  +      I  +     S   G +    D+V +      +DL    +    +  + +
Sbjct: 123 DLATKGIEATVIRLDGAVEISVQLGVADAIADVVGSGRTLSQHDLVAFGEPLCDSEAVLI 182

Query: 232 YGYNERFKGKENLVLISKWCNRMQSVINS 260
                   G++      +   R+Q V+  
Sbjct: 183 E--RAGTDGQDQTEARDQLVARVQGVVFG 209


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.313    0.131    0.394 

Gapped
Lambda     K      H
   0.267   0.0690    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,639,490
Number of extensions: 78710
Number of successful extensions: 162
Number of sequences better than 10.0: 1
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 8
Length of query: 420
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 332
Effective length of database: 1,199,356
Effective search space: 398186192
Effective search space used: 398186192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (24.7 bits)