BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy431
(179 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 231 bits (589), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 104/144 (72%), Positives = 120/144 (83%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VLAQKPY KAVD WSIGVI+YILLCGYPPFYDENDA LF QILK E+EFD+PYWDDISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AKDFIRHLM DPE+RFTC+QAL H WI G+ A +KNIH +VSEQ+KKNFAKS+WKQA++
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFN 308
Query: 141 ATTVIRQMQKMALTSAQTGASTSN 164
AT V+R M+K+ L G T +
Sbjct: 309 ATAVVRHMRKLQLGHQPGGTGTDS 332
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 227 bits (579), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 101/131 (77%), Positives = 116/131 (88%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VLAQKPY KAVD WSIGVI+YILLCGYPPFYDENDA LF QILK E+EFD+PYWDDISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AKDFIRHLM DPE+RFTC+QAL H WI G+ A +KNIH +VSEQ+KKNFAKS+WKQA++
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFN 308
Query: 141 ATTVIRQMQKM 151
AT V+R M+K+
Sbjct: 309 ATAVVRHMRKL 319
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 221 bits (564), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 112/127 (88%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VLAQKPY KAVD WSIGVI+YILLCGYPPFYDENDA LF QILK E+EFD+PYWDDISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AKDFIRHLM DPE+RFTC+QAL H WI G+ A +KNIH +VSEQ+KKNFAKS+WKQA++
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFN 308
Query: 141 ATTVIRQ 147
AT V+R
Sbjct: 309 ATAVVRH 315
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 216 bits (551), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 115/136 (84%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VLAQKPY KAVD WSIGVI+YILLCGYPPFYDEND+ LF QILK E+EFD+PYWDDISDS
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDS 252
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AKDFIR+LM DP +R+TC+QA H WI G+ A KNIH +VS Q++KNFAKS+W+QA++
Sbjct: 253 AKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAKSKWRQAFN 312
Query: 141 ATTVIRQMQKMALTSA 156
AT V+R M+K+ L S+
Sbjct: 313 ATAVVRHMRKLHLGSS 328
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 187 bits (475), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 84/105 (80%), Positives = 92/105 (87%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VLAQKPY KAVD WSIGVI+YILLCGYPPFYDENDA LF QILK E+EFD+PYWDDISDS
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQ 125
AKDFIRHLM DPE+RFTC+QAL H WI G+ A +KNIH +VSEQ
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQ 293
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 180 bits (457), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 104/127 (81%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VLAQKPY KAVD WSIGVI+YILLCGYPPFY+E ++ LF +I +G +EF++P+WDDIS+S
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES 237
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AKDFI HL+ DP R+TC++AL+H WI GN A ++I+ +VS Q++KNFAKS+W+QA++
Sbjct: 238 AKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRQAFN 297
Query: 141 ATTVIRQ 147
A V+
Sbjct: 298 AAAVVHH 304
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 113 bits (282), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PYGK VD+W+ GVI YILL GYPPF+DE+ L+ QI G ++F +P WD ++
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPE 263
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVS-EQLKKNFAKSRWKQAY 139
AK+ I ++ ++P +R T QAL H W+C + +H + E L+K A+ + K A
Sbjct: 264 AKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAI 323
Query: 140 HATTVI 145
T ++
Sbjct: 324 LTTMLV 329
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PYGK VD+W+ GVI YILL GYPPF+DE+ L+ QI G ++F +P WD ++
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AKD I ++ ++P +R T +AL H WIC + +H + K F R +
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAI 296
Query: 141 ATTVI 145
TT++
Sbjct: 297 LTTML 301
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEN-DANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG VD+WS+G+I+YILLCG+ PFYDE D +F +IL E+ F +P+WD++S +AKD +
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 286
Query: 86 RHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYHATT 143
R L+ +DP++R T QAL H W+ G AA+ ++ T ++L++ A+ + K A A
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMD-TAQKKLQEFNARRKLKAAVKAVV 343
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PYGK VD+W+ GVI YILL GYPPF+DE+ L+ QI G ++F +P WD ++
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AKD I ++ ++P +R T +AL H WIC + +H + K F R +
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAI 296
Query: 141 ATTVI 145
TT++
Sbjct: 297 LTTML 301
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 71/125 (56%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PY K VD+W+ GVI YILL GYPPF+DE+ L+AQI G +++ +P WD ++
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
AK I ++ V+P++R T QAL WIC IH + K F R +
Sbjct: 261 AKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAI 320
Query: 141 ATTVI 145
TT+I
Sbjct: 321 LTTMI 325
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL ++ YGK VD+W+ GVI YILL GYPPF+DE+ L+ QI G ++F +P WD ++
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVS-EQLKKNFAKSRWKQA 138
AK+ I ++ ++P +R T +AL H W+C + +H + E LKK A+ + K A
Sbjct: 237 AKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGA 295
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 67/114 (58%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PYGK VD+W+ GVI YILL GYPPF+DE+ L+ QI G ++F +P WD ++
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 243
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSR 134
AKD I ++ ++P +R T +AL H WI + +H + K F R
Sbjct: 244 AKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARR 297
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 67/114 (58%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PYGK VD+W+ GVI YILL GYPPF+DE+ L+ QI G ++F +P WD ++
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 254
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSR 134
AKD I ++ ++P +R T +AL H WI + +H + K F R
Sbjct: 255 AKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARR 308
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PY K VD+W+ GVI YILL GYPPF+DE+ L+AQI G +++ +P WD ++
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 236
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH 119
AK I ++ V+P++R T QAL WIC IH
Sbjct: 237 AKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 275
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PY K VD+W+ GVI YILL GYPPF+DE+ L+AQI G +++ +P WD ++
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH 119
AK I ++ V+P++R T QAL WIC IH
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 276
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL + PY K VD+W+ GVI YILL GYPPF+DE+ L+AQI G +++ +P WD ++
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWIC 109
AK I ++ V+P++R T QAL WIC
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALKVPWIC 266
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%)
Query: 22 LAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSA 81
+ +K Y + DVWSIGVI +ILL GYPPF + D + ++ KG++ FD+P W ++S+ A
Sbjct: 209 VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268
Query: 82 KDFIRHLMCVDPERRFTCKQALAHEWI 108
KD I+ ++ D +RR + +QAL H WI
Sbjct: 269 KDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 22 LAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSA 81
+ +K Y + DVWS GVI YILLCGYPPF + D + ++ KG+F FD P W +SD A
Sbjct: 177 VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 82 KDFIRHLMCVDPERRFTCKQALAHEWIC 109
K ++ ++ +P +R + ++AL H WI
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIV 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 22 LAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSA 81
+ +K Y + DVWS GVI YILLCGYPPF + D + ++ KG+F FD P W +SD A
Sbjct: 194 VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 82 KDFIRHLMCVDPERRFTCKQALAHEWIC 109
K ++ ++ +P +R + ++AL H WI
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIV 281
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ ++PYGK VDVW GVI +ILL G PFY + LF I+KG+++ + W IS+S
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISES 264
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH-GTVSEQLKKNFAKSRWKQAY 139
AKD +R ++ +DP R T +AL H W+ IH EQL+K A+ + K A
Sbjct: 265 AKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAV 324
Query: 140 HATT 143
A
Sbjct: 325 LAAV 328
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ ++PYGK VDVW GVI +ILL G PFY + LF I+KG+++ + W IS+S
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISES 262
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH-GTVSEQLKKNFAKSRWKQAY 139
AKD +R ++ +DP R T +AL H W+ IH EQL+K A+ + K A
Sbjct: 263 AKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAV 322
Query: 140 HATT 143
A
Sbjct: 323 LAAV 326
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ ++PYGK VDVW GVI +ILL G PFY + LF I+KG+++ + W IS+S
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISES 262
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH-GTVSEQLKKNFAKSRWKQAY 139
AKD +R ++ +DP R T +AL H W+ IH EQL+K A+ + K A
Sbjct: 263 AKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAV 322
Query: 140 HATT 143
A
Sbjct: 323 LAAV 326
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPFY +N+ ++ ++ G++ FD P W ISD AKD IR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ P R T Q L H WI
Sbjct: 259 KMLTFHPSLRITATQCLEHPWI 280
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF E I ++FD Y+ + S+
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHG 120
AKDFIR L+ DP+RR T Q+L H WI A +N+ G
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWI--KAIRRRNVRG 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPFY +N+ ++ ++ G++ FD P W ISD AKD IR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASE 115
++ P R T Q L H WI ++ E
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 240 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 299
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 300 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 355
Query: 136 KQAYHATT 143
+ T
Sbjct: 356 EDVKEEMT 363
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 349
Query: 136 KQAYHATT 143
+ T
Sbjct: 350 EDVKEEMT 357
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 22 LAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSA 81
+ +K Y + DVWS GVI YILLCGYPPF +ND ++ ++ KG++ FD W +ISD A
Sbjct: 219 VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEA 278
Query: 82 KDFIRHLMCVDPERRFTCKQALAHEWICG-----NAASEKNIHGTVSEQLK 127
K+ I+ ++ D +R T ++AL WI N + +K + G +S K
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRK 329
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 204 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 263
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 264 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 319
Query: 136 KQAYHATT 143
+ T
Sbjct: 320 EDVKEEMT 327
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPFY +N+ ++ ++ G++ FD P W ISD AKD IR
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ P R T Q L H WI
Sbjct: 259 KMLTFHPSLRITATQCLEHPWI 280
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 195 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 254
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 255 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 310
Query: 136 KQAYHATT 143
+ T
Sbjct: 311 EDVKEEMT 318
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 190 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 305
Query: 136 KQAYHATT 143
+ T
Sbjct: 306 EDVKEEMT 313
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 188 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 303
Query: 136 KQAYHATT 143
+ T
Sbjct: 304 EDVKEEMT 311
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 196 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 255
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 256 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 311
Query: 136 KQAYHATT 143
+ T
Sbjct: 312 EDVKEEMT 319
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 188 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 303
Query: 136 KQAYHATT 143
+ T
Sbjct: 304 EDVKEEMT 311
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 189 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 248
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 249 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 304
Query: 136 KQAYHATT 143
+ T
Sbjct: 305 EDVKEEMT 312
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
YGK VD+WS GVI Y LL G PPF+ + I+ G ++F +P WDD SD+ KD +
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 265
Query: 87 HLMCVDPERRFTCKQALAHEW 107
+ V P++R+T ++ALAH +
Sbjct: 266 RFLVVQPQKRYTAEEALAHPF 286
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 190 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 305
Query: 136 KQAYHATT 143
+ T
Sbjct: 306 EDVKEEMT 313
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 194 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 253
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + + H WI + +H S LK++ K RW
Sbjct: 254 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERW 309
Query: 136 KQAYHATT 143
+ T
Sbjct: 310 EDVKEEMT 317
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
YGK VD+WS GVI Y LL G PPF+ + I+ G ++F +P WDD SD+ KD +
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 265
Query: 87 HLMCVDPERRFTCKQALAHEW 107
+ V P++R+T ++ALAH +
Sbjct: 266 RFLVVQPQKRYTAEEALAHPF 286
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
YGK VD+WS GVI Y LL G PPF+ + I+ G ++F +P WDD SD+ KD +
Sbjct: 193 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS 252
Query: 87 HLMCVDPERRFTCKQALAHEW 107
+ V P++R+T ++ALAH +
Sbjct: 253 RFLVVQPQKRYTAEEALAHPF 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF E I ++FD Y+ + S+
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHG 120
AKDFIR L+ DP+RR Q+L H WI A +N+ G
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWI--KAIRRRNVRG 300
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
YGK VD+W+ GVI + LL G PPF+ + I++G+++F +P WDD S + KD I
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS 341
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
L+ VDPE R T +QAL H +
Sbjct: 342 RLLQVDPEARLTAEQALQHPFF 363
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPF N+ ++ ++ KG++ F+ P W +S+SAKD IR
Sbjct: 227 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 286
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ P R + + AL HEWI
Sbjct: 287 KMLTYVPSMRISARDALDHEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPF N+ ++ ++ KG++ F+ P W +S+SAKD IR
Sbjct: 228 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 287
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ P R + + AL HEWI
Sbjct: 288 KMLTYVPSMRISARDALDHEWI 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPF N+ ++ ++ KG++ F+ P W +S+SAKD IR
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ P R + + AL HEWI
Sbjct: 264 KMLTYVPSMRISARDALDHEWI 285
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDDISDSAK 82
Y K+ D+WS+GVI YILLCGYPPFY + + +I G++EF P W ++S+ K
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 234
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRWKQAYHA 141
IR+L+ +P +R T + + H WI + +H S LK++ K RW+
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH--TSRVLKED--KERWEDVKEE 290
Query: 142 TT 143
T
Sbjct: 291 MT 292
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPF N+ ++ ++ KG++ F+ P W +S+SAKD IR
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 269
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ P R + + AL HEWI
Sbjct: 270 KMLTYVPSMRISARDALDHEWI 291
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLF----AQILKGEFEFDAPYWDD 76
VL + Y K+ D WS+GVI YILLCGYPPFY + + +I G++EF P W +
Sbjct: 234 VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSE 293
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAASEKNIHGTVSEQLKKNFAKSRW 135
+S+ K IR+L+ +P +R T + H WI + +H S LK++ K RW
Sbjct: 294 VSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLH--TSRVLKED--KERW 349
Query: 136 KQAYHATT 143
+ T
Sbjct: 350 EDVKEEXT 357
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A I ++FD ++ S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH--GTVS-EQLKKNFAKSRWKQ 137
AKDFIR L+ + +R T ++AL H WI + + V+ E KK + + RWK
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRWKL 308
Query: 138 AYHATTVIRQMQKMALTSAQTGAS 161
++ ++ + + + S
Sbjct: 309 SFSIVSLCNHLTRSLMKKVHLRTS 332
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A I ++FD ++ S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAASEKNIHGTVS-EQLKKNFAKSRWKQ 137
AKDFIR L+ + +R T ++AL H WI N + V+ E +K + + RWK
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKL 308
Query: 138 AYHATTVIRQMQK 150
++ ++ + +
Sbjct: 309 SFSIVSLCNHLTR 321
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCG+PPFY + +I G++ F P W +
Sbjct: 200 VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE 259
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+S+ AK IR L+ DP R T Q + H WI
Sbjct: 260 VSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + DVWS GVI YILL G PPF N+ ++ ++ KG++ F+ P W +S+SAKD IR
Sbjct: 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ P R + + AL HEWI
Sbjct: 264 KXLTYVPSXRISARDALDHEWI 285
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDEN----DANLFAQILKGEFEFDAPYWDD 76
VL + Y K+ D+WS+GVI YILLCG+PPFY + +I G++ F P W +
Sbjct: 181 VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE 240
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+S+ AK IR L+ DP R T Q + H WI
Sbjct: 241 VSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF E I ++FD Y+ + S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP+RR Q+L H WI
Sbjct: 249 AKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A I ++FD ++ S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAASEKNIHGTVS-EQLKKNFAKSRWKQ 137
AKDFIR L+ + +R T ++AL H WI N + V+ E +K + + RWK
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKL 308
Query: 138 AYHATTVIRQMQK 150
+ ++ + +
Sbjct: 309 DFSIVSLCNHLTR 321
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWIC---GNAASEKNIHGTVSEQLKKNFAKSRWKQ 137
AKDFIR L+ DP++R T + +L H WI A + E+ KK A+ +WKQ
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAARKKWKQ 307
Query: 138 AYHATTVIRQMQKMALTSAQTGASTSN 164
+ ++ +++ + L+ + + S+
Sbjct: 308 SVRLISLCQRLSRSFLSRSNMSVARSD 334
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
Y +AVD WS+GVI +I L GYPPF + +L QI G++ F W ++S+ A D +
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 255
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ L+ VDP+ RFT ++AL H W+
Sbjct: 256 KKLLVVDPKARFTTEEALRHPWL 278
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWIC---GNAASEKNIHGTVSEQLKKNFAKSRWKQ 137
AKDFIR L+ DP++R T + +L H WI A + E+ KK A+ +WKQ
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAARKKWKQ 307
Query: 138 AYHATTVIRQMQKMALTSAQTGASTSN 164
+ ++ +++ + L+ + + S+
Sbjct: 308 SVRLISLCQRLSRSFLSRSNMSVARSD 334
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
Y +AVD WS+GVI +I L GYPPF + +L QI G++ F W ++S+ A D +
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 255
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ L+ VDP+ RFT ++AL H W+
Sbjct: 256 KKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
Y +AVD WS+GVI +I L GYPPF + +L QI G++ F W ++S+ A D +
Sbjct: 196 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 255
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ L+ VDP+ RFT ++AL H W+
Sbjct: 256 KKLLVVDPKARFTTEEALRHPWL 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
Y +AVD WS+GVI +I L GYPPF + +L QI G++ F W ++S+ A D +
Sbjct: 195 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 254
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ L+ VDP+ RFT ++AL H W+
Sbjct: 255 KKLLVVDPKARFTTEEALRHPWL 277
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
Y +AVD WS+GVI +I L GYPPF + +L QI G++ F W ++S+ A D +
Sbjct: 202 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 261
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ L+ VDP+ RFT ++AL H W+
Sbjct: 262 KKLLVVDPKARFTTEEALRHPWL 284
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFY---DENDANLFAQILKGEFEFDAPYWDDI 77
VL ++ Y A D+WS+GV+ Y +L GY PF D+ + A+I G+F YW+ +
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWIC 109
SD+AKD + ++ VDP +R T L H WI
Sbjct: 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A I ++FD ++ S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAASEKNIHGTVS-EQLKKNFAKSRWKQ 137
AKDFIR L+ + +R T ++AL H WI N + V+ E +K + + R K
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKL 308
Query: 138 AYHATTVIRQMQK 150
A+ ++ + +
Sbjct: 309 AFSIVSLCNHLTR 321
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A I ++FD ++ S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAASEKNIHGTVS-EQLKKNFAKSRWKQ 137
AKDFIR L+ + +R T ++AL H WI N + V+ E +K + + R K
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKL 308
Query: 138 AYHATTVIRQMQK 150
A+ ++ + +
Sbjct: 309 AFSIVSLCNHLTR 321
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
YG D WS GV+ Y+LLCGYPPF D + +I +G F F W ++S A+ IR
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 260
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
L+ P++R T QAL HEW
Sbjct: 261 RLLTKSPKQRITSLQALEHEWF 282
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V KP G D+WS+GV+SYILL G PF END + ++ D + IS+
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 386
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWIC-GNA 112
KDFIR L+ DP R T QAL H W+ GNA
Sbjct: 387 GKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V KP G D+WS+GV+SYILL G PF END + ++ D + IS+
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 280
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWIC-GNAA 113
KDFIR L+ DP R T QAL H W+ GNA
Sbjct: 281 GKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 314
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
YG D WS GV+ Y+LLCGYPPF D + +I +G F F W ++S A+ IR
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIR 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
L+ P++R T QAL HEW
Sbjct: 244 RLLTKSPKQRITSLQALEHEW 264
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
Y +AVD WS+GVI +I L GYPPF + +L QI G++ F W ++S+ A D +
Sbjct: 335 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 394
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ L+ VDP+ RFT ++AL H W+
Sbjct: 395 KKLLVVDPKARFTTEEALRHPWL 417
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
Y +AVD WS+GVI +I L GYPPF + +L QI G++ F W ++S+ A D +
Sbjct: 321 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLV 380
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ L+ VDP+ RFT ++AL H W+
Sbjct: 381 KKLLVVDPKARFTTEEALRHPWL 403
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 246
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 246
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A + +EF+ Y+ + S
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
AKDFIR L+ DP++R T + +L H WI
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFY---DENDANLFAQILKGEFEFDAPYWDDI 77
VL ++ Y A D+WS+GV+ Y L GY PF D+ + A+I G+F YW+ +
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWIC 109
SD+AKD + + VDP +R T L H WI
Sbjct: 251 SDTAKDLVSKXLHVDPHQRLTAALVLRHPWIV 282
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ +P G D+WSIGVI+YILL G PF + A I ++FD ++ S+
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWIC 109
AKDFIR L+ + +R T ++AL H WI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ ++P G D+W+IGV+ Y+LL G PF E+D + + ++EFD + +S
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE 280
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAAS 114
AKDFI++L+ +P +R T AL H W+ G+ ++
Sbjct: 281 AKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN 314
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYD---ENDANLFAQILKGEFEFDAPYWDDI 77
VL ++ Y + D+WS+G++ Y +L GY PF + + + +I G+F W+ +
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV 255
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
S++AKD + ++ VDP +R T KQ L H W+
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYD---ENDANLFAQILKGEFEFDAPYWDDI 77
VL ++ Y + D+WS+G++ Y +L GY PF + + + +I G+F W+ +
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV 255
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
S++AKD + ++ VDP +R T KQ L H W+
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 31 VDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
D+WS+GVI+Y+LL G PF +NDA IL ++ + + DIS+ AK+FI L+
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLI 328
Query: 91 VDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKN 129
+ R + +AL H W+ S+ +H +S Q KKN
Sbjct: 329 KEKSWRISASEALKHPWL-----SDHKLHSRLSAQKKKN 362
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDAN---------------LFAQILKGEFEFDA 71
Y K D+WS+GV+ YI+L GYPPF A+ LF I +G++EF
Sbjct: 203 YDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD 262
Query: 72 PYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
W IS AKD I L+ D ++R + Q L H W+ G A
Sbjct: 263 KDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQA 303
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G DVWS+G++ Y+L+CG+ PF D+N L+ +I++G ++D P W +S S+ ++
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG--KYDVPKW--LSPSSILLLQQ 243
Query: 88 LMCVDPERRFTCKQALAHEWI 108
++ VDP++R + K L H WI
Sbjct: 244 MLQVDPKKRISMKNLLNHPWI 264
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPF---------YDENDA------NLFAQILKGEFEFDA 71
Y K D+WS+GVI YILL GYPPF +D +A LF I +G++EF
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 72 PYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
W IS +AKD I L+ D ++R + Q L H W+ G A
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPF---------YDENDA------NLFAQILKGEFEFDA 71
Y K D+WS+GVI YILL GYPPF +D +A LF I +G++EF
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 72 PYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
W IS +AKD I L+ D ++R + Q L H W+ G A
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 30 AVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLM 89
A D+WS+G + Y+LL G PF E + + I+ E+ FD + +IS A DF+ L+
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLL 242
Query: 90 CVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYHATTVIRQMQ 149
+ + R T +AL H W+ K VS ++ + R+ YH T+I++
Sbjct: 243 VKERKSRMTASEALQHPWL-------KQKIERVSTKVIRTLKHRRY---YH--TLIKKDL 290
Query: 150 KMALTSAQTGASTSNLLGGAQESNKSAAI 178
M +++A+ GGA S K ++
Sbjct: 291 NMVVSAARISC------GGAIRSQKGVSV 313
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDA-------NLFAQILKGEFEFDAPY 73
+L Q Y ++ D+WS+GVI Y +L G PF + + + +I KG+F F+
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA 239
Query: 74 WDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
W ++S AKD I+ L+ VDP +R +EW+
Sbjct: 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
YG D WS GV+ ++LL G PF NDA+ +Q+L + F+ P ++ +S A+D +
Sbjct: 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLS 312
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+L+ + + RF +AL H WI
Sbjct: 313 NLLNRNVDERFDAMRALQHPWI 334
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L P A D+W+IG+I+Y+LL PF E++ + I + ++ + +S
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL 263
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A DFI+ L+ +PE+R T + L+H W+
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VD+WS GVI Y LLCG PF DE+ LF +I G F P + ++ S + H
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI--PEY--LNRSVATLLMH 244
Query: 88 LMCVDPERRFTCKQALAHEW 107
++ VDP +R T K HEW
Sbjct: 245 MLQVDPLKRATIKDIREHEW 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VD+WS GVI Y LLCG PF DE+ LF +I G F P + ++ S + H
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI--PEY--LNRSVATLLMH 244
Query: 88 LMCVDPERRFTCKQALAHEW 107
++ VDP +R T K HEW
Sbjct: 245 MLQVDPLKRATIKDIREHEW 264
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VD+WS GVI Y LLCG PF D++ LF +I G F P + ++ S ++H
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY--TPQY--LNPSVISLLKH 249
Query: 88 LMCVDPERRFTCKQALAHEW 107
++ VDP +R T K HEW
Sbjct: 250 MLQVDPMKRATIKDIREHEW 269
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 264
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 255
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 286
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 240
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 264
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 25 KPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDF 84
+ + + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDL 241
Query: 85 IRHLMCVDPERRFTCKQALAHEWICGNAASEKN 117
I L+ +P +R ++ L H WI N++ N
Sbjct: 242 ISRLLKHNPSQRPXLREVLEHPWITANSSKPSN 274
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 240
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAASEKN 117
L+ +P +R ++ L H WI N++ N
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 242
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 243 RLLKHNPSQRPMLREVLEHPWITANSS 269
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 237
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 238 RLLKHNPSQRPMLREVLEHPWITANSS 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 286
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 287 -KDLLRNLLQVDLTKRF 302
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 286
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 287 -KDLLRNLLQVDLTKRF 302
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 235
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 236 RLLKHNPSQRPMLREVLEHPWITANSS 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 286
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 287 -KDLLRNLLQVDLTKRF 302
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ +P +R ++ L H WI N++
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 266
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 267 -KDLLRNLLQVDLTKRF 282
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 260
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 261 -KDLLRNLLQVDLTKRF 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 266 -KDLLRNLLQVDLTKRF 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 258
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 259 -KDLLRNLLQVDLTKRF 274
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 252
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 253 -KDLLRNLLQVDLTKRF 268
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 258
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 259 -KDLLRNLLQVDLTKRF 274
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 251
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD +RF
Sbjct: 252 -KDLLRNLLQVDLTKRF 267
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V++ KPY K++D WS G++ Y +L GY PFYD N + +IL E F P+++ +
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF-PPFFN---ED 229
Query: 81 AKDFIRHLMCVDPERRF 97
KD + L+ D +R
Sbjct: 230 VKDLLSRLITRDLSQRL 246
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ KAVD WS+GV+ Y LL G PF + + N A+I + + + PY ++S AKD I+
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ 298
Query: 87 HLMCVDPERRFTC 99
L+ DP++R C
Sbjct: 299 RLLMKDPKKRLGC 311
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPE 375
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWICG 110
AK + L+ DP++R K+ + H + G
Sbjct: 376 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPE 378
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWICG 110
AK + L+ DP++R K+ + H + G
Sbjct: 379 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 413
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLIS 242
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ + +R T + L H WI N++
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +FA+I+K E++F ++
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PK 260
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 261 ARDLVEKLLVLDATKRLGCEE 281
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+WS+GV+ Y L G PPF + +I + EF F D +++ A+D I
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLIS 242
Query: 87 HLMCVDPERRFTCKQALAHEWICGNAA 113
L+ + +R T + L H WI N++
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPE 236
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWICG 110
AK + L+ DP++R K+ + H + G
Sbjct: 237 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPE 235
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWICG 110
AK + L+ DP++R K+ + H + G
Sbjct: 236 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 270
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPE 237
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWICG 110
AK + L+ DP++R K+ + H + G
Sbjct: 238 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 272
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +FA+I+K E++F ++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PK 260
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 261 ARDLVEKLLVLDATKRLGCEE 281
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKR 244
Query: 88 LMCVDPERRFTCKQALAHEWICGNAASEKN 117
+ ++P +R T +Q + WI NA E++
Sbjct: 245 FLVLNPIKRGTLEQIMKDRWI--NAGHEED 272
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKR 247
Query: 88 LMCVDPERRFTCKQALAHEWICGNAASEKN 117
+ ++P +R T +Q + WI NA E++
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWI--NAGHEED 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +S
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 231
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWIC 109
AK + L+ DP++R K+ + H +
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +S
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 234
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWIC 109
AK + L+ DP++R K+ + H +
Sbjct: 235 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 268
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y KAVD W++GV+ Y + GYPPF+ + ++ +I+ G+ F + + D+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL--- 265
Query: 81 AKDFIRHLMCVDPERRF 97
KD +R+L+ VD + F
Sbjct: 266 -KDLLRNLLQVDLTKAF 281
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +S
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 231
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWIC 109
AK + L+ DP++R K+ + H +
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +S
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 231
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWIC 109
AK + L+ DP++R K+ + H +
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VD+W IGV+ Y LL G PPF + + +I+K + +F A + A+D I
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLIS 253
Query: 87 HLMCVDPERRFTCKQALAHEWICGNA 112
L+ +P R Q AH W+ N+
Sbjct: 254 KLLRHNPSERLPLAQVSAHPWVRANS 279
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +S
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 231
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWIC 109
AK + L+ DP++R K+ + H +
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +S
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 236
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWIC 109
AK + L+ DP++R K+ + H +
Sbjct: 237 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 270
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL YG+AVD W +GV+ Y ++CG PFY+++ LF IL E F +S
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 231
Query: 81 AKDFIRHLMCVDPERRF-----TCKQALAHEWIC 109
AK + L+ DP++R K+ + H +
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F A ++
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFF----PK 263
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 264 ARDLVEKLLVLDATKRLGCEE 284
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG--EFEFDAPYWDDI 77
VL +K Y GK DVWS GV Y++L G PF D + F + + ++ P + I
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHI 246
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKN 129
S + I + DP +R + + HEW N ++ T++ Q ++
Sbjct: 247 SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDES 298
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG--EFEFDAPYWDDI 77
VL +K Y GK DVWS GV Y++L G PF D + F + + ++ P + I
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHI 246
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKN 129
S + I + DP +R + + HEW N ++ T++ Q ++
Sbjct: 247 SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDES 298
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG--EFEFDAPYWDDI 77
VL +K Y GK DVWS GV Y++L G PF D + F + + ++ P + I
Sbjct: 186 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHI 245
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQL 126
S + I + DP +R + + HEW N ++ T++ Q
Sbjct: 246 SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQF 294
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG--EFEFDAPYWDDI 77
VL +K Y GK DVWS GV Y++L G PF D + F + + ++ P + I
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHI 246
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKN 129
S + I + DP +R + + HEW N ++ T++ Q ++
Sbjct: 247 SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDES 298
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG--EFEFDAPYWDDI 77
VL +K Y GK DVWS GV Y++L G PF D + F + + ++ P + I
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHI 246
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQ 137
S + I + DP +R + + HEW N ++ + N +++ +
Sbjct: 247 SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLP---------ADLMNDNTMTTQFDE 297
Query: 138 AYHATTVIRQMQKMALTSAQTGASTSNL 165
+ I ++ ++ + A T NL
Sbjct: 298 SDQPGQSIEEIMQIIAEATVPPAGTQNL 325
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
GKA+DVW++GV Y + G PF DE L ++I EF P DI++ KD I
Sbjct: 218 GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEF--PDQPDIAEDLKDLITR 275
Query: 88 LMCVDPERRFTCKQALAHEWI 108
++ +PE R + H W+
Sbjct: 276 MLDKNPESRIVVPEIKLHPWV 296
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++A +PYGK+VD W+ GV+ Y +L G PPF E++ LF I+ E + Y +S
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM----EHNVSYPKSLSKE 246
Query: 81 AKDFIRHLMCVDPERRFTC 99
A + LM P +R C
Sbjct: 247 AVSICKGLMTKHPAKRLGC 265
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 260
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 261 ARDLVEKLLVLDATKRLGCEE 281
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDAN-LFAQILKGEFEFDAPYWDDISD 79
V+ +K YG VD+WS+G+++ ++ G PP+ +EN L+ G E P + +S
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSA 244
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+DF+ + +D E+R + K+ L H+++
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDAN-LFAQILKGEFEFDAPYWDDISD 79
V+ +K YG VD+WS+G+++ ++ G PP+ +EN L+ G E P + +S
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSA 244
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+DF+ + +D E+R + K+ L H+++
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDAN-LFAQILKGEFEFDAPYWDDISD 79
V+ +K YG VD+WS+G+++ ++ G PP+ +EN L+ G E P + +S
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSA 244
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+DF+ + +D E+R + K+ L H+++
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKK 246
Query: 88 LMCVDPERRFTCKQALAHEWI 108
+ ++P +R T +Q + W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKK 246
Query: 88 LMCVDPERRFTCKQALAHEWI 108
+ ++P +R T +Q + W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKK 246
Query: 88 LMCVDPERRFTCKQALAHEWI 108
+ ++P +R T +Q + W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKK 246
Query: 88 LMCVDPERRFTCKQALAHEWI 108
+ ++P +R T +Q + W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKK 246
Query: 88 LMCVDPERRFTCKQALAHEWI 108
+ ++P +R T +Q + W+
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 258
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 259 ARDLVEKLLVLDATKRLGCEE 279
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 258
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 259 ARDLVEKLLVLDATKRLGCEE 279
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 260
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 261 ARDLVEKLLVLDATKRLGCEE 281
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 258
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 259 ARDLVEKLLVLDATKRLGCEE 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 260
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 261 ARDLVEKLLVLDATKRLGCEE 281
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 258
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 259 ARDLVEKLLVLDATKRLGCEE 279
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 261
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 262 ARDLVEKLLVLDATKRLGCEE 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 261
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 262 ARDLVEKLLVLDATKRLGCEE 282
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKK 239
Query: 88 LMCVDPERRFTCKQALAHEWI 108
+ ++P +R T +Q + W+
Sbjct: 240 FLILNPSKRGTLEQIMKDRWM 260
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 257
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 258 ARDLVEKLLVLDATKRLGCEE 278
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 260
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 261 ARDLVEKLLVLDATKRLGCEE 281
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 257
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 258 ARDLVEKLLVLDATKRLGCEE 278
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 265
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 266 ARDLVEKLLVLDATKRLGCEE 286
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 242
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 243 ARDLVEKLLVLDATKRLGCEE 263
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDAN-LFAQILKGEFEFDAPYWDDISD 79
V+ +K YG VD+WS+G+++ ++ G PP+ +EN L+ G E P + +S
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSA 245
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+DF+ + +D E+R + K+ + H+++
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 235
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 236 ARDLVEKLLVLDATKRLGCEE 256
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDAN-LFAQILKGEFEFDAPYWDDISD 79
V+ +K YG VD+WS+G+++ ++ G PP+ +EN L+ G E P + +S
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSA 245
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+DF+ + +D E+R + K+ + H+++
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 236
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 237 ARDLVEKLLVLDATKRLGCEE 257
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 237
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 238 ARDLVEKLLVLDATKRLGCEE 258
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L +K K+ D+W++G I Y L+ G PPF N+ +F +I+K E++F ++
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PK 238
Query: 81 AKDFIRHLMCVDPERRFTCKQ 101
A+D + L+ +D +R C++
Sbjct: 239 ARDLVEKLLVLDATKRLGCEE 259
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS G++ Y++L G PF DE NLF ++ + P D +S A+ IR
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMP--DFLSPGAQSLIRR 241
Query: 88 LMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSR 134
++ DP +R T ++ W N + E+++ ++A SR
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLPD----YLRPMEEVQGSYADSR 284
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L + YG AVD W++GV+ Y +LCG+ PF EN+ +LF IL E + P W + +
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW--LHED 250
Query: 81 AKDFIRHLMCVDPERRF 97
A ++ M +P R
Sbjct: 251 ATGILKSFMTKNPTMRL 267
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISD 79
V++ K Y G VDVWS GVI Y++LC PF DE+ LF I G + P + +S
Sbjct: 182 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL--PKF--LSP 237
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ V+P R + + + +W
Sbjct: 238 GAAGLIKRMLIVNPLNRISIHEIMQDDW 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISD 79
V++ K Y G VDVWS GVI Y++LC PF DE+ LF I G + P + +S
Sbjct: 183 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL--PKF--LSP 238
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ V+P R + + + +W
Sbjct: 239 GAAGLIKRMLIVNPLNRISIHEIMQDDW 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K + + VD+W GV+ Y L G PPF + +I+ + +F P+ +SD
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF-PPF---LSDG 239
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
+KD I L+ P +R K + H W+ N+
Sbjct: 240 SKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 271
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K + + VD+W GV+ Y L G PPF + +I+ + +F P+ +SD
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF-PPF---LSDG 238
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
+KD I L+ P +R K + H W+ N+
Sbjct: 239 SKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K + + VD+W GV+ Y L G PPF + +I+ + +F P+ +SD
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF-PPF---LSDG 238
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
+KD I L+ P +R K + H W+ N+
Sbjct: 239 SKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISD 79
V++ K Y G VDVWS GVI Y++LC PF DE+ LF I G + P + +S
Sbjct: 177 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL--PKF--LSP 232
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ V+P R + + + +W
Sbjct: 233 GAAGLIKRMLIVNPLNRISIHEIMQDDW 260
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL ++PY + VD W +G + Y +L G PPFY N A ++ IL + +I++S
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP----NITNS 265
Query: 81 AKDFIRHLMCVDPERRFTCK 100
A+ + L+ D +R K
Sbjct: 266 ARHLLEGLLQKDRTKRLGAK 285
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISD 79
V++ K Y G VDVWS GVI Y++LC PF DE+ LF I G + P + +S
Sbjct: 173 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL--PKF--LSP 228
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ V+P R + + + +W
Sbjct: 229 GAAGLIKRMLIVNPLNRISIHEIMQDDW 256
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++A +PYGK+VD W+ GV+ Y +L G PF E++ LF I+ E + Y +S
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM----EHNVAYPKSMSKE 568
Query: 81 AKDFIRHLMCVDPERRFTC 99
A + LM P +R C
Sbjct: 569 AVAICKGLMTKHPGKRLGC 587
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++++ PYG VD+WS+G++ ++ G PP+++E ++++ +S S
Sbjct: 318 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPS 376
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAAS 114
K F+ L+ DP +R T + L H ++ G AS
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 412
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+ + +G DVWS+G + Y LL G PPF + N +++ ++E P + +S
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM--PSF--LSIE 238
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHG 120
AKD I L+ +P R + L H ++ N++++ G
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++++ PYG VD+WS+G++ ++ G PP+++E ++++ +S S
Sbjct: 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPS 299
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAAS 114
K F+ L+ DP +R T + L H ++ G AS
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 335
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++A +PYGK+VD W+ GV+ Y +L G PF E++ LF I+ E + Y +S
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM----EHNVAYPKSMSKE 247
Query: 81 AKDFIRHLMCVDPERRFTC 99
A + LM P +R C
Sbjct: 248 AVAICKGLMTKHPGKRLGC 266
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAP-YWDDISDSAKDFI 85
YG D WS+GV Y +L G PFY E+ + +I+ E F P + D+S+ AKD I
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLI 333
Query: 86 RHLMCVDPERRF 97
+ L+C ERR
Sbjct: 334 QRLIC-SRERRL 344
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAP-YWDDISDSAKDFI 85
YG D WS+GV Y +L G PFY E+ + +I+ E F P + D+S+ AKD I
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLI 317
Query: 86 RHLMCVDPERRF 97
+ L+C ERR
Sbjct: 318 QRLIC-SRERRL 328
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++++ PYG VD+WS+G++ ++ G PP+++E ++++ +S S
Sbjct: 198 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPS 256
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAAS 114
K F+ L+ DP +R T + L H ++ G AS
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 292
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++++ PYG VD+WS+G++ ++ G PP+++E ++++ +S S
Sbjct: 196 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPS 254
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAAS 114
K F+ L+ DP +R T + L H ++ G AS
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 290
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ S ++ ++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--XSTDCENLLKK 246
Query: 88 LMCVDPERRFTCKQALAHEW 107
+ ++P +R T +Q W
Sbjct: 247 FLILNPSKRGTLEQIXKDRW 266
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++++ PYG VD+WS+G++ ++ G PP+++E ++++ +S S
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPS 249
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAAS 114
K F+ L+ DP +R T + L H ++ G AS
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++++ PYG VD+WS+G++ ++ G PP+++E ++++ +S S
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPS 245
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI--CGNAAS 114
K F+ L+ DP +R T + L H ++ G AS
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 281
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYW-DDISDSAKDFI 85
YG D WS+GV Y +L G PFY E+ + +I+ + F P D+S++AKD I
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLI 317
Query: 86 RHLMCVDPER 95
R L+C R
Sbjct: 318 RRLICSREHR 327
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VD+WS GV Y + G PF +N LF I KG + D D ++
Sbjct: 191 GFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPG----DCGPPLSDLLKG 246
Query: 88 LMCVDPERRFTCKQALAHEW 107
++ +P +RF+ +Q H W
Sbjct: 247 MLEYEPAKRFSIRQIRQHSW 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL++K + VDVWSIG I Y LL G PPF + +I K E+ I+
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPV 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ DP R T + L E+
Sbjct: 248 AASLIQKMLQTDPTARPTINELLNDEF 274
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL++K + VDVWSIG I Y LL G PPF + +I K E+ I+
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPV 243
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ DP R T + L E+
Sbjct: 244 AASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL++K + VDVWSIG I Y LL G PPF + +I K E+ I+
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPV 243
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ DP R T + L E+
Sbjct: 244 AASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL++K + VDVWSIG I Y LL G PPF + +I K E+ I+
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPV 265
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ DP R T + L E+
Sbjct: 266 AASLIQKMLQTDPTARPTINELLNDEF 292
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL++K + VDVWSIG I Y LL G PPF + +I K E+ I+
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPV 267
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ DP R T + L E+
Sbjct: 268 AASLIQKMLQTDPTARPTINELLNDEF 294
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+++ PYG VD+WS+G++ ++ G PP+++E +I + +S
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSV 270
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ F+ ++ +P +R T ++ L H ++
Sbjct: 271 LRGFLDLMLVREPSQRATAQELLGHPFL 298
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL++K + VDVWSIG I Y LL G PPF + +I K E+ I+
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPV 241
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEW 107
A I+ ++ DP R T + L E+
Sbjct: 242 AASLIQKMLQTDPTARPTINELLNDEF 268
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL +K + VD+WS+G I Y LL G PPF + +I K E+ I+
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPV 268
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEK 116
A IR ++ DP R + + L E+ A +
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL +K + VD+WS+G I Y LL G PPF + +I K E+ I+
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPV 268
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEK 116
A IR ++ DP R + + L E+ A +
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL +K + VD+WS+G I Y LL G PPF + +I K E+ I+
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPV 268
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEK 116
A IR ++ DP R + + L E+ A +
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDD-ISD 79
+L QK Y +VD WS GV+ Y +L G PF+ +++ LF I D P++ +
Sbjct: 191 LLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEK 244
Query: 80 SAKDFIRHLMCVDPERRFTCK 100
AKD + L +PE+R +
Sbjct: 245 EAKDLLVKLFVREPEKRLGVR 265
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDD-ISD 79
+L + Y +VD WS GV+ Y +L G PF+ +++ LF I D P++ +
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEK 243
Query: 80 SAKDFIRHLMCVDPERRFTCK 100
AKD + L +PE+R +
Sbjct: 244 EAKDLLVKLFVREPEKRLGVR 264
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
VL +K + VD+WS+G I Y LL G PPF + +I K E+ I+
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPV 252
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEK 116
A IR ++ DP R + + L E+ A +
Sbjct: 253 ASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 288
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDD---I 77
V+++ Y VD+WS+G++ ++ G PP++ ++ Q +K + P + +
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP----VQAMKRLRDSPPPKLKNSHKV 267
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASE 115
S +DF+ ++ DP+ R T ++ L H ++ E
Sbjct: 268 SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPE 305
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L Q+ GK DVWS GV Y++L G PF D + + + ++ DDI S
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRIS 248
Query: 81 AK--DFIRHLMCVDPERRFTCKQALAHEWICGNAASE 115
+ I + DP R + + H W N ++
Sbjct: 249 PECCHLISRIFVADPATRISIPEIKTHSWFLKNLPAD 285
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ Q Y D+WS+G+ + L G PP D + + I K D + S
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---PPTLVGDFTKS 247
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKNFAKSRWKQAYH 140
K+FI + DP R T K+ L H++I N S+K + T +L F RWK H
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFIVKN--SKKTSYLT---ELIDRF--KRWKAEGH 300
Query: 141 A 141
+
Sbjct: 301 S 301
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L + + +AVD WS+G + Y +L G PPF EN +ILK + PY ++
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL-PPY---LTQE 247
Query: 81 AKDFIRHLM 89
A+D ++ L+
Sbjct: 248 ARDLLKKLL 256
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L + + +AVD WS+G + Y +L G PPF EN +ILK + PY ++
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL-PPY---LTQE 247
Query: 81 AKDFIRHLM 89
A+D ++ L+
Sbjct: 248 ARDLLKKLL 256
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCV 91
D+WS GV+ Y LL G PF + + + E + A ++ A D ++ ++
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY-AVECRPLTPQAVDLLKQMLTK 265
Query: 92 DPERRFTCKQALAHEW 107
DPERR + Q L HEW
Sbjct: 266 DPERRPSAAQVLHHEW 281
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD--ENDANLFAQILKGEFEFDAPYWDDISDSAKDF 84
YGKA D+WS+G + G PPFY+ E A +F G F+ + +S AK F
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAF 258
Query: 85 IRHLMCVDPERRFTCKQALAHEWI 108
I DP++R L E++
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYD--ENDANLFAQILKGEFEFDAPYWDDISDSAKDF 84
YGKA D+WS+G + G PPFY+ E A +F G F+ + +S AK F
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAF 244
Query: 85 IRHLMCVDPERRFTCKQALAHEWI 108
I DP++R L E++
Sbjct: 245 ILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 28 GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRH 87
G VDVWS+GVI Y L+ G PF +N L ++L+G++ P++ +S ++ ++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI--PFY--MSTDCENLLKK 247
Query: 88 LMCVDPERRFTCKQALAHEWI 108
L+ ++P +R + +Q + W+
Sbjct: 248 LLVLNPIKRGSLEQIMKDRWM 268
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDD-ISDSAKDFIRHLMC 90
D W++GV +Y + G PFY ++ A + +I+ + P D+ + + A+DFI+ L+C
Sbjct: 252 DWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC 311
Query: 91 VDPERRF 97
PE R
Sbjct: 312 -PPETRL 317
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG+ D WS+GV Y +L G PFY ++ +++I+ + P +DIS AK+ I
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLI 313
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG+ D WS+GV Y +L G PFY ++ +++I+ + P +DIS AK+ I
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLI 308
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWD-DISD 79
V+ Q Y D+WS+G+ + L G PP + + + I K + P + + S
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPPTLEGNYSK 245
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
K+F+ + +P R T K+ L H++I NA
Sbjct: 246 PLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG+ D WS+GV Y +L G PFY ++ +++I+ + P +DIS AK+ I
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLI 313
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWD-DISD 79
V+ Q Y D+WS+G+ + L G PP + + + I K + P + + S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPPTLEGNYSK 230
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
K+F+ + +P R T K+ L H++I NA
Sbjct: 231 PLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWD-DISD 79
V+ Q Y D+WS+G+ + L G PP + + + I K + P + + S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPPTLEGNYSK 230
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
K+F+ + +P R T K+ L H++I NA
Sbjct: 231 PLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 263
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWD-DISD 79
V+ Q Y D+WS+G+ + L G PP + + + I K + P + + S
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----NPPTLEGNYSK 250
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWICGNA 112
K+F+ + +P R T K+ L H++I NA
Sbjct: 251 PLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 283
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDAN-LFAQILKGEFEFDAP-YWDDIS 78
V+ + Y D+WS+G+ + + G PP+ D + +F F P W S
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW---S 252
Query: 79 DSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
D+ DF++ + PE+R T Q L H ++
Sbjct: 253 DNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 25/116 (21%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y +D+WS+G I ++ G P F ++A+ +I + ++ W ++++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 81 AK-------------------------DFIRHLMCVDPERRFTCKQALAHEWICGN 111
K D + ++ +DP +R T KQAL H + N
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 25/116 (21%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y +D+WS+G I ++ G P F ++A+ +I + ++ W ++++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 81 AK-------------------------DFIRHLMCVDPERRFTCKQALAHEWICGN 111
K D + ++ +DP +R T KQAL H + N
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1MXE|E Chain E, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|F Chain F, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
Length = 25
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 23/25 (92%)
Query: 126 LKKNFAKSRWKQAYHATTVIRQMQK 150
+KKNFAKS+WKQA++AT V+R M+K
Sbjct: 1 IKKNFAKSKWKQAFNATAVVRHMRK 25
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 25/116 (21%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ K Y +D+WS+G I ++ G P F ++A+ +I + ++ W ++++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 81 AK-------------------------DFIRHLMCVDPERRFTCKQALAHEWICGN 111
K D + ++ +DP +R T KQAL H + N
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 26 PYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
P G+ D+W++G I Y+L PF E+ A L +I+ G++ P D I
Sbjct: 229 PIGEKQDIWALGCILYLLCFRQHPF--EDGAKL--RIVNGKYSI--PPHDTQYTVFHSLI 282
Query: 86 RHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQLKKN 129
R ++ V+PE R + + + H+ AA N ++E L++N
Sbjct: 283 RAMLQVNPEERLSIAE-VVHQLQEIAAARNVNPKSPITELLEQN 325
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFR----QRVSSECQHLIR 283
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWM 305
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFR----QRVSSECQHLIR 268
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 283
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWM 305
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 256
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWM 278
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFR----QRVSSECQHLIR 275
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWM 297
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 255
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWM 277
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 241
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWM 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFR----QRVSXECQHLIR 288
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 289 WCLALRPSDRPTFEEIQNHPWM 310
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 241
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWM 263
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFR----QRVSXECQHLIR 283
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWM 305
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 240
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWM 262
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSXECQHLIR 256
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWM 278
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 241
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWM 263
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 239
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 240 WCLALRPSDRPTFEEIQNHPWM 261
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSXECQHLIR 255
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWM 277
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 240
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWM 262
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 30/119 (25%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
++ + Y ++D+WS G I ++ G P F ND I + W ++
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239
Query: 81 AK------------------------------DFIRHLMCVDPERRFTCKQALAHEWIC 109
K DF+ L+ ++P+ R + KQAL H W
Sbjct: 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSSECQHLIR 236
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWM 258
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSXECQHLIR 256
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 257 WCLALRPXDRPTFEEIQNHPWM 278
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSXECQHLIR 263
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 264 WCLALRPSDRPTFEEIQNHPWM 285
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.001, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ + Y + D W++G + Y ++ G PF ++ + E Y + S
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQ 415
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHE 106
A+ L+C DP R C+ A E
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSARE 441
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDAN------------------------LFAQI 62
YGKAVDVW+IG + + G P F ++D + +FA +
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 63 LKGEFEFDAPY---WDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEK 116
E + P + +S+ D + + +DP++R C + L H++ + +E+
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAER 318
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.001, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ + Y + D W++G + Y ++ G PF ++ + E Y + S
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQ 415
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHE 106
A+ L+C DP R C+ A E
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSARE 441
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I++G+ F +S + IR
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIRGQVFFRQ----RVSXECQHLIR 236
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWM 258
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFR----QRVSSECQHLIR 269
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFR----QRVSSECQHLIR 268
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFR----QRVSSECQHLIR 269
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFR----QRVSSECQHLIR 268
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFR----QRVSXECQHLIR 269
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFR----QRVSXECQHLIR 269
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFR----QRVSXECQHLIR 268
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWM 290
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 28 GKAVDVWSIGVISYILLCGYPPF-YDENDANLFAQILKGEFEF--DAPYW---------- 74
G VD+WS+G+ Y++ PF + LF I E+ D ++
Sbjct: 230 GAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKST 289
Query: 75 ---DDISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ +S+ DF++ + +P R T + AL HEW+
Sbjct: 290 CSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG-----EFEFDAPYWD 75
V+ Q Y D+WS+G+ + L G PP D + + I K E + P+
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPF-- 244
Query: 76 DISDSAKDFIRHLMCVDPERRFTCKQALAHEWIC 109
K+F+ + DP R T K+ L H++I
Sbjct: 245 ------KEFVEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+G++ VWS+G++ Y ++CG PF E+D +I+ G+ F +S + IR
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPF--EHD----EEIIGGQVFFRQ----RVSSECQHLIR 236
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
+ + P R T ++ H W+
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWM 258
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL----------------- 63
++ K Y +VD+WSIG I ++ G P F D + +I
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250
Query: 64 ----KGEFE-FDAPYWDDI----SDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+ F+ F+ W I D + +++C DP +R + + A+ H +
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL----------------- 63
++ K Y +VD+WSIG I ++ G P F D + +I
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250
Query: 64 ----KGEFE-FDAPYWDDI----SDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+ F+ F+ W I D + +++C DP +R + + A+ H +
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 25 KPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDA--PYWDDISDSAK 82
+PY DVWS+G+ + PP ++ N + +I K E A W S + K
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFK 271
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSE 124
DF++ + + + R+T Q L H ++ + S K I ++E
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD--SNKPIRELIAE 311
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
DVWS+G I Y + G PF N + I+ E + P D +D ++ +
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLK 259
Query: 91 VDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 260 RDPKQRISIPELLAHPYV 277
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 25 KPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDA--PYWDDISDSAK 82
+PY DVWS+G+ + PP ++ N + +I K E A W S + K
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFK 271
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSE 124
DF++ + + + R+T Q L H ++ + S K I ++E
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD--SNKPIRELIAE 311
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 25 KPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDA--PYWDDISDSAK 82
+PY DVWS+G+ + PP ++ N + +I K E A W S + K
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFK 271
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSE 124
DF++ + + + R+T Q L H ++ + S K I ++E
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD--SNKPIRELIAE 311
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
DVWS+G I Y + G PF N + I+ E + P D +D ++ +
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLK 306
Query: 91 VDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 307 RDPKQRISIPELLAHPYV 324
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
DVWS+G I Y + G PF N + I+ E + P D +D ++ +
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLK 306
Query: 91 VDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 307 RDPKQRISIPELLAHPYV 324
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 25 KPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDA--PYWDDISDSAK 82
+PY DVWS+G+ + PP ++ N + +I K E A W S + K
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFK 245
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSE 124
DF++ + + + R+T Q L H ++ + S K I ++E
Sbjct: 246 DFLKKCLEKNVDARWTTSQLLQHPFVTVD--SNKPIRELIAE 285
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
DVWS+G I Y + G PF N + I+ E + P D +D ++ +
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLK 258
Query: 91 VDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 259 RDPKQRISIPELLAHPYV 276
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
DVWS+G I Y + G PF N + I+ E + P D +D ++ +
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLK 262
Query: 91 VDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 263 RDPKQRISIPELLAHPYV 280
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISD-SAKDFIRHLM 89
DVWS+G I Y + G PF N + I+ E + P DI + +D ++ +
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---DIPEKDLQDVLKCCL 305
Query: 90 CVDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 306 KRDPKQRISIPELLAHPYV 324
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
DVWS+G I Y + G PF N + I+ E + P D +D ++ +
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLK 278
Query: 91 VDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 279 RDPKQRISIPELLAHPYV 296
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 32 DVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMC 90
DVWS+G I Y + G PF N + I+ E + P D +D ++ +
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLK 278
Query: 91 VDPERRFTCKQALAHEWI 108
DP++R + + LAH ++
Sbjct: 279 RDPKQRISIPELLAHPYV 296
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG+ D WS+GV + +L G PFY ++ +++I+ + P +IS AK+ I
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLI 314
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 33 VWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCVD 92
VWS+G++ Y ++CG PF E D +IL+ E F A +S IR +
Sbjct: 222 VWSLGILLYDMVCGDIPF--ERD----QEILEAELHFPA----HVSPDCCALIRRCLAPK 271
Query: 93 PERRFTCKQALAHEWI 108
P R + ++ L W+
Sbjct: 272 PSSRPSLEEILLDPWM 287
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F ++ D N +
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINL 256
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 257 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 26 PYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPY------WDDISD 79
PY D+WS+G+ + PP ++ N + +I K D P W S
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----DPPTLLTPSKW---SV 250
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSE 124
+DF++ + +PE R + Q L H ++ + S K + V+E
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFV-SSITSNKALRELVAE 294
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 279 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 279 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 26 PYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPY------WDDISD 79
PY D+WS+G+ + PP ++ N + +I K D P W S
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----DPPTLLTPSKW---SV 242
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSE 124
+DF++ + +PE R + Q L H ++ + S K + V+E
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFV-SSITSNKALRELVAE 286
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 256
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 257 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 264
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 265 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 255
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 256 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L + Y +VD +++GV Y ++ PF + ++ + E Y D S +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 81 AKDFIRHLMCVDPERRF 97
+KDF L+ DPE+R
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 266
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 267 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + +D++S+G+I + ++ YP N+ ++ EF + D+ K IR
Sbjct: 208 YNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR 265
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
L+ DP +R + L W+
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L + Y +VD +++GV Y ++ PF + ++ + E Y D S +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 81 AKDFIRHLMCVDPERRF 97
+KDF L+ DPE+R
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG +D+WS+G I LL GYP E++ + A +++ + D S AK+F+
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE-LLGMPSQKLLDASKRAKNFV 333
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + +D++S+G+I + ++ YP N+ ++ EF + D+ K IR
Sbjct: 208 YNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR 265
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
L+ DP +R + L W+
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L + Y +VD +++GV Y ++ PF + ++ + E Y D S +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 81 AKDFIRHLMCVDPERRF 97
+KDF L+ DPE+R
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L + Y +VD +++GV Y ++ PF + ++ + E Y D S +
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419
Query: 81 AKDFIRHLMCVDPERRF 97
+KDF L+ DPE+R
Sbjct: 420 SKDFCEALLQKDPEKRL 436
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG +D+WS+G I LL GYP E++ + A +++ + D S AK+F+
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE-LLGMPSQKLLDASKRAKNFV 333
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 33/118 (27%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI--- 77
+L K Y K++D+WS+G I +L P F ++ + IL +P +D+
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI---LGSPSQEDLNCI 275
Query: 78 --------------------------SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
SDS A D + ++ +P +R T ++ALAH ++
Sbjct: 276 INMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 23/110 (20%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL-----KGEFEFD----- 70
VL Q Y VD+WS+G I + P F +D + +IL GE ++
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 71 -------------APYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+ DI + KD + + +P +R + AL+H +
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF-----YDENDAN----LFAQILKGEFEFDA 71
+L + YG +VD W++GV+ + ++ G PF D D N LF IL+ +
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283
Query: 72 PYWDDISDSAKDFIRHLMCVDPERRFTC 99
+S A ++ + DP+ R C
Sbjct: 284 ----SLSVKAASVLKSFLNKDPKERLGC 307
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 23/110 (20%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL-----KGEFEFD----- 70
VL Q Y VD+WS+G I + P F +D + +IL GE ++
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 71 -------------APYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+ DI + KD + + +P +R + AL+H +
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L Y K +D+WS+G I +LCG P F + N +I+ G +F P +D+
Sbjct: 202 LLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GVIDF--PSNEDVESI 258
Query: 81 AKDFIRHLM 89
F + ++
Sbjct: 259 QSPFAKTMI 267
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFI 85
YG +D+WS+G I LL GYP E++ + A +++ D S AK+F+
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE-LLGMPXQKLLDASKRAKNFV 333
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 23/110 (20%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL-----KGEFEFD----- 70
VL Q Y VD+WS+G I + P F +D + +IL GE ++
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 71 -------------APYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+ DI + KD + + +P +R + AL+H +
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF-----YDENDAN----LFAQILKGEFEFDA 71
+L + YG +VD W++GV+ + ++ G PF D D N LF IL+ +
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 251
Query: 72 PYWDDISDSAKDFIRHLMCVDPERRFTC 99
+S A ++ + DP+ R C
Sbjct: 252 ----SMSVKAASVLKSFLNKDPKERLGC 275
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG--------------------- 65
YG VDVW+IG + LL G P + ++D + I K
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 66 ------EFEFDAPYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+ E + +IS A ++ + +DP R TC+Q L H +
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF------------------YDENDANLFAQI 62
+L K Y K++D+WS+G I +L P F + D N +
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINL 260
Query: 63 LKGEFEFDAPY-----WDDI---SDS-AKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ P+ W+ + +DS A D + ++ +P +R +QALAH ++
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF-----YDENDAN----LFAQILKGEFEFDA 71
+L + YG +VD W++GV+ + ++ G PF D D N LF IL+ +
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 236
Query: 72 PYWDDISDSAKDFIRHLMCVDPERRFTC 99
+S A ++ + DP+ R C
Sbjct: 237 ----SLSVKAASVLKSFLNKDPKERLGC 260
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + D+WS+G + Y L PPF + L +I +G+F PY SD + I
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIPY--RYSDELNEIIT 249
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ + R + ++ L + I
Sbjct: 250 RMLNLKDYHRPSVEEILENPLI 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + D+WS+G + Y L PPF + L +I +G+F PY SD + I
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIPY--RYSDELNEIIT 249
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ + R + ++ L + I
Sbjct: 250 RMLNLKDYHRPSVEEILENPLI 271
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF-----YDENDAN----LFAQILKGEFEFDA 71
+L + YG +VD W++GV+ + ++ G PF D D N LF IL+ +
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 240
Query: 72 PYWDDISDSAKDFIRHLMCVDPERRFTC 99
+S A ++ + DP+ R C
Sbjct: 241 ----SLSVKAASVLKSFLNKDPKERLGC 264
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + D+WS+G + Y L PPF + L +I +G+F PY SD + I
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIPYR--YSDELNEIIT 249
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
++ + R + ++ L + I
Sbjct: 250 RMLNLKDYHRPSVEEILENPLI 271
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 33.9 bits (76), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 21 VLAQKPY-GKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISD 79
VL PY G +++WS+GV Y L+ PF + + E PY +S
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV--------EAAIHPPYL--VSK 249
Query: 80 SAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ L+ PERR T ++ + W+
Sbjct: 250 ELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 30 AVDVWSIGVISYILLCGYPPFYD-ENDANLFAQIL--KGEFEFDAPYWDDISDSAKDFIR 86
A+D+WS GVI LL G PFY +D AQI+ +G E +AK F +
Sbjct: 227 AIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRE--------TIQAAKTFGK 278
Query: 87 HLMC 90
++C
Sbjct: 279 SILC 282
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y + +D +S+G+I + + YP N+ ++ EF + D+ K IR
Sbjct: 208 YNEKIDXYSLGIIFFEXI--YPFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIR 265
Query: 87 HLMCVDPERRFTCKQALAHEWI 108
L+ DP +R + L W+
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
+ + Y AVD+WS+G I ++ G P F +N A +I++
Sbjct: 203 IFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ ++ + ++ D WS GV+ + +L G PF ++ ILK + P + +S
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLGMPQF--LSPE 253
Query: 81 AKDFIRHLMCVDPERRF 97
A+ +R L +P R
Sbjct: 254 AQSLLRMLFKRNPANRL 270
>pdb|2L7L|B Chain B, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
Length = 22
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 19/21 (90%)
Query: 131 AKSRWKQAYHATTVIRQMQKM 151
AKS+WKQA++AT V+R M+K+
Sbjct: 1 AKSKWKQAFNATAVVRHMRKL 21
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 33.1 bits (74), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ ++ + ++ D WS GV+ + +L G PF ++ ILK + P + +S
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLGMPQF--LSPE 252
Query: 81 AKDFIRHLMCVDPERRF 97
A+ +R L +P R
Sbjct: 253 AQSLLRMLFKRNPANRL 269
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.7 bits (73), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 24 QKPYGKAVDVWSIGVISYILLCGYPPF 50
QK YG VD+WSIGV Y G PF
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.7 bits (73), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ ++ + ++ D WS GV+ + +L G PF ++ ILK + P + +S
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLGMPQF--LSPE 252
Query: 81 AKDFIRHLMCVDPERRF 97
A+ +R L +P R
Sbjct: 253 AQSLLRMLFKRNPANRL 269
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 28/116 (24%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF-------------------YDENDANLFAQ 61
+L Y +A+DVWS G I L P F + +ND
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Query: 62 ILKGEFEFDAPYWD---------DISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
E+ P + ++ D ++ ++ DP +R T K+AL H ++
Sbjct: 254 PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 24 QKPYGKAVDVWSIGVISYILLCGYPPF 50
QK YG VD+WSIGV Y G PF
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 28/116 (24%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF-------------------YDENDANLFAQ 61
+L Y +A+DVWS G I L P F + +ND
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Query: 62 ILKGEFEFDAPYWD---------DISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
E+ P + ++ D ++ ++ DP +R T K+AL H ++
Sbjct: 254 PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 271 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 320
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 267 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 267 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 28/116 (24%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF-------------------YDENDANLFAQ 61
+L Y +A+DVWS G I L P F + +ND
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES 253
Query: 62 ILKGEFEFDAPYWD---------DISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
E+ P + ++ D ++ ++ DP +R T K+AL H ++
Sbjct: 254 PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFE-FDAPYWDDISDSAKDFI 85
Y VDVWS+G+ L PP ++ N + I + E + +W S+ ++F+
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFV 286
Query: 86 RHLMCVDPERRFTCKQALAHEWIC 109
+ P+ R T + L H ++
Sbjct: 287 DSCLQKIPQDRPTSEVLLKHRFVL 310
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 262 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 311
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 266 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L+ Y + VD+WS+G I +L G F ++ + QILK + ++D
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 272
Query: 81 A-------------KDF--------------IRHLMCVDPERRFTCKQALAHEWI 108
A KDF + ++ +D ++R T QAL H +
Sbjct: 273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 267 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 272 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 272 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 212 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 271
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 272 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 319
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 280 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 282
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 283 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 330
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 211 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 270
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 271 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 318
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 223 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 282
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 283 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 332
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 279 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 280 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 220 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 279
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 280 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 327
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 266 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 262 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 265 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 309
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 27/115 (23%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+L+ Y + VD+WS+G I +L G F ++ + QILK + ++D
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254
Query: 81 A-------------KDF--------------IRHLMCVDPERRFTCKQALAHEWI 108
A KDF + ++ +D ++R T QAL H +
Sbjct: 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 266
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 267 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWIC 109
+ L + +D ++R T QALAH +
Sbjct: 265 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 314
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 219 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 278
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 279 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 326
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 262 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFE-FDAPYWDDISDSAKDFI 85
Y VDVWS+G+ L PP ++ N + I + E + +W S+ ++F+
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFV 247
Query: 86 RHLMCVDPERRFTCKQALAHEWI 108
+ P+ R T + L H ++
Sbjct: 248 DSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 266 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 265 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 199 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 258
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 259 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 306
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 202 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 261
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 262 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 309
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 205 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 264
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 265 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 312
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 198 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 257
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 258 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 305
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 206 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 265
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 266 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 313
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 210 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 269
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 270 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 317
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 200 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 259
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 260 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 307
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 257 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 26/114 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCG-------------------YPPFYDENDANLFAQ 61
+L+ Y KA+D+W+ G I +L G P ++E+ L +
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSV 255
Query: 62 I---LKGEF-EFDAPY---WDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
I ++ + E P IS A DF+ ++ P R T ++AL+H ++
Sbjct: 256 IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 256 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 256 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 256 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 256 QSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I LL G F + + IL+ A I S+SA+++I
Sbjct: 197 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 256
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEW 107
+ L + +D ++R T QALAH +
Sbjct: 257 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 304
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 23/111 (20%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL----------------- 63
VL Q Y VD+WS+G I + P F ++A+ +I
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 64 -KGEFEFDAP-----YWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+G F P ++ +S + ++ +P +R + +AL H ++
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 27/109 (24%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI-SDSAKDFI 85
Y + VD+WS+G I ++ G F + + +I+K A + + SD AK+++
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM 262
Query: 86 RHL--------------------------MCVDPERRFTCKQALAHEWI 108
+ L + +D E+R T +ALAH +
Sbjct: 263 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 23/111 (20%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL----------------- 63
VL Q Y VD+WS+G I + P F ++A+ +I
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 249
Query: 64 -KGEFEFDAP-----YWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+G F P ++ +S + ++ +P +R + +AL H ++
Sbjct: 250 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 32 DVWSIGVISYILLCGYPPFYDE 53
D++SIG++ Y +L G PPF E
Sbjct: 194 DIYSIGIVLYEMLVGEPPFNGE 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 23/111 (20%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL----------------- 63
VL Q Y VD+WS+G I + P F ++A+ +I
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 64 -KGEFEFDAP-----YWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+G F P ++ +S + ++ +P +R + +AL H ++
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 23/111 (20%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL----------------- 63
VL Q Y VD+WS+G I + P F ++A+ +I
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 64 -KGEFEFDAP-----YWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+G F P ++ +S + ++ +P +R + +AL H ++
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
VL PY A+D+WS+G I + G P F N+ + +I++
Sbjct: 210 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 253
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
VL PY A+D+WS+G I + G P F N+ + +I++
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
VL PY A+D+WS+G I + G P F N+ + +I++
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 31.6 bits (70), Expect = 0.22, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF 50
+L QK Y VD WS G +++ + G+ PF
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 31.6 bits (70), Expect = 0.23, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF 50
+L QK Y VD WS G +++ + G+ PF
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 30 AVDVWSIG-VISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS-AKDFIRH 87
VD++S G V Y++ G PF A IL G D + + D A++ I
Sbjct: 209 TVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGACSLDCLHPEKHEDVIARELIEK 266
Query: 88 LMCVDPERRFTCKQALAHEWI 108
++ +DP++R + K L H +
Sbjct: 267 MIAMDPQKRPSAKHVLKHPFF 287
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
+ KPY D+W++G + Y L F + NL +I+ G F P S
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF---PPVSLHYSYD 252
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGTVSEQL 126
+ + L +P R + L +I K I +S QL
Sbjct: 253 LRSLVSQLFKRNPRDRPSVNSILEKGFIA------KRIEKFLSPQL 292
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 27/108 (25%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAP------------YW 74
Y VD+WS+G I LL G F + N QI++ A Y
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYI 288
Query: 75 DDISDSAK---------------DFIRHLMCVDPERRFTCKQALAHEW 107
+ + K D + ++ +D ++R T +ALAH +
Sbjct: 289 NSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPY 336
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH 119
D +R ++ DP +R T +AL H + G E++ H
Sbjct: 344 DLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFH 380
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 218 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIHGT 121
D +R ++ DP +R T +AL H + G E++ H +
Sbjct: 312 DLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTS 350
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWICGNAASEKNIH 119
D +R ++ DP +R T +AL H + G E++ H
Sbjct: 321 DLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFH 357
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 23 AQKPYGKAVDVWSIGVISYILLCGYPPFYDENDA-NLFAQILKGEFEFDAPYWD-----D 76
+++ Y DVWS+G+ Y L G P+ N + Q++KG D P +
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG----DPPQLSNSEERE 257
Query: 77 ISDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
S S +F+ + D +R K+ L H +I
Sbjct: 258 FSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 241
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 242 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ A+D + ++ +DP++R + +AL H +I
Sbjct: 289 TSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 220 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 211 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 256
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 220 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 238 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 283
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 218 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 278 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 323
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 217 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 224 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 269
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 237 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 282
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 219 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 216 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 261
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 217 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 32 DVWSIGVISYILLC-GYPPFYDENDANLFAQILKGEFEFDAPYWDD 76
DVWS GV+ + L+ G PP+ D N ++ +L+G Y D
Sbjct: 214 DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 259
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ A+D + ++ +DP++R + +AL H +I
Sbjct: 291 TSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
Y D+WS+G + Y + PFY + NL++ K E + D P SD + +R
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIE-QCDYPPLP--SDHYSEELR 268
Query: 87 HL--MCV--DPERR 96
L MC+ DPE+R
Sbjct: 269 QLVNMCINPDPEKR 282
>pdb|2Y00|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob92)
pdb|2Y00|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob92)
pdb|2Y01|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob102)
pdb|2Y01|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Dobutamine (Crystal
Dob102)
pdb|2Y02|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Carmoterol
pdb|2Y02|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Carmoterol
pdb|2Y03|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Isoprenaline
pdb|2Y03|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Agonist Isoprenaline
pdb|2Y04|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Salbutamol
pdb|2Y04|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Partial Agonist Salbutamol
pdb|4AMI|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Bucindolol
pdb|4AMI|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Bucindolol
pdb|4AMJ|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Carvedilol
pdb|4AMJ|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Biased Agonist Carvedilol
Length = 315
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 35 SIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCVDPE 94
++G+I + + PF+ N N+F + L ++ F A W ++SA + I + C P+
Sbjct: 233 TLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIY--CRSPD 290
Query: 95 RRFTCKQALAH 105
R K+ LA
Sbjct: 291 FRKAFKRLLAF 301
>pdb|2VT4|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2VT4|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2VT4|C Chain C, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2VT4|D Chain D, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Cyanopindolol
pdb|2YCW|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Carazolol
pdb|2YCW|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Carazolol
pdb|2YCX|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|2YCX|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|2YCZ|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Iodocyanopindolol
pdb|2YCZ|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Iodocyanopindolol
pdb|2YCY|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|2YCY|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising
Mutations And Bound Antagonist Cyanopindolol
pdb|4GPO|A Chain A, Oligomeic Turkey Beta1-adrenergic G Protein-coupled
Receptor
pdb|4GPO|B Chain B, Oligomeic Turkey Beta1-adrenergic G Protein-coupled
Receptor
Length = 313
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 35 SIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCVDPE 94
++G+I + + PF+ N N+F + L ++ F A W ++SA + I + C P+
Sbjct: 231 TLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIY--CRSPD 288
Query: 95 RRFTCKQALAH 105
R K+ LA
Sbjct: 289 FRKAFKRLLAF 299
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFY 51
Y AVD WS+GV +Y LL G P++
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|2FLI|A Chain A, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|B Chain B, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|C Chain C, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|D Chain D, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|E Chain E, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|F Chain F, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|G Chain G, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|H Chain H, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|I Chain I, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|J Chain J, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|K Chain K, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
pdb|2FLI|L Chain L, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
Length = 220
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 52 DENDAN-LFAQILKGEFEFDAPYWDDISDSAKD-----FIRHLMCVDPERRFTCKQALAH 105
+E DA + I+ G+F + + D+ S + F HLM VDPER
Sbjct: 26 EETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGA 85
Query: 106 EWICGNAASEKNIHGTV 122
+ + + S ++IHG +
Sbjct: 86 DIMTIHTESTRHIHGAL 102
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDS 80
V+ ++ + + D WS GV+ + +L G PF ++ ILK + P + +S
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA--KLGMPQF--LSTE 256
Query: 81 AKDFIRHLMCVDPERRF 97
A+ +R L +P R
Sbjct: 257 AQSLLRALFKRNPANRL 273
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFY 51
+L + Y KA+D+W+IG I LL P F+
Sbjct: 207 LLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCV 91
DV+S+G + Y +L G PPF ++ ++ Q ++ + + + +S + +
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 92 DPERRF 97
+PE R+
Sbjct: 261 NPENRY 266
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCV 91
DV+S+G + Y +L G PPF ++ ++ Q ++ + + + +S + +
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 92 DPERRF 97
+PE R+
Sbjct: 261 NPENRY 266
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG--------------- 65
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 66 -EFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 235
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 236 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 236
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 237 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 24/105 (22%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDI--------- 77
YG VD+W++G I LL P ++D + +I + W D+
Sbjct: 190 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 249
Query: 78 ---------------SDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
D D I+ L +P R T QAL ++
Sbjct: 250 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCV 91
DV+S+G + Y +L G PPF ++ ++ Q ++ + + + +S + +
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 92 DPERRF 97
+PE R+
Sbjct: 261 NPENRY 266
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 279 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 241
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 242 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 238 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 228 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 236 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCV 91
DV+S+G + Y +L G PPF ++ ++ Q ++ + + + +S + +
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 92 DPERRF 97
+PE R+
Sbjct: 261 NPENRY 266
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 238
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 239 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------- 64
+L K Y AVD+WS+G I ++ F +++ + +I +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 234
Query: 65 GEFEFDAPYW---------DDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+++ P W + + + + ++ DP +R + K ALAH +
Sbjct: 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCV 91
DV+S+G + Y +L G PPF ++ ++ Q ++ + + + +S + +
Sbjct: 218 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 277
Query: 92 DPERRF 97
+PE R+
Sbjct: 278 NPENRY 283
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 272
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 273 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 205 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 266
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 266
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 219 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
>pdb|2FZV|A Chain A, Crystal Structure Of An Apo Form Of A Flavin-Binding
Protein From Shigella Flexneri
pdb|2FZV|B Chain B, Crystal Structure Of An Apo Form Of A Flavin-Binding
Protein From Shigella Flexneri
pdb|2FZV|C Chain C, Crystal Structure Of An Apo Form Of A Flavin-Binding
Protein From Shigella Flexneri
pdb|2FZV|D Chain D, Crystal Structure Of An Apo Form Of A Flavin-Binding
Protein From Shigella Flexneri
Length = 279
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 12/58 (20%)
Query: 60 AQILKGEFEFDA-------PYWDDISDSAKDFIRHLMCVDPER-----RFTCKQALAH 105
+ I K EFDA PY+D I+D ++ +R V P R R++ ++A H
Sbjct: 198 SSIAKAFQEFDAAGRMKPSPYYDRIADVMEELVRFTALVRPHREALTDRYSERKAAGH 255
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 208 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 267
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 25/106 (23%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK---------------------- 64
Y +D+WS G + L+ G P F E+ + +I+K
Sbjct: 219 YTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKF 278
Query: 65 ---GEFEFDAPYWDDISDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
F + A D I L+ P R T +AL H +
Sbjct: 279 PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ +D +L+ I K E D P
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD-P 265
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
++DI S A DF+ L+ D + R T ++A+ H +
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 213 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILL 44
+L Q+ Y +A+DVWSIG I LL
Sbjct: 255 ILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 25/112 (22%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQIL-------KGEFEFDAPY 73
+L Y ++D+WSIG + L+ G P F E + +I+ K + P+
Sbjct: 213 MLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPH 272
Query: 74 WDDI------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEW 107
+ ++ A D + ++ +P+ R +A+AH +
Sbjct: 273 YTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 204 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 287 ARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ D L+ + K + D P
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD-P 268
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+++DI S A D + L+ D ++R T K+A+ H +
Sbjct: 269 HFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 22 LAQKPYGKAVDVWSIGVISY-ILLCGYPPFYDENDANLFAQILKGEFEFDAP 72
+A + + A DVWS GV+ + +L G P+++ + ++ + + +G + AP
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRLPAP 276
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 201 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGE---FEFDAPYWDDISDSAKD 83
Y D+WS G+ + L G P++ + L+ + E + + K
Sbjct: 204 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS 263
Query: 84 FIRHL-MCV--DPERRFTCKQALAHEW 107
F + + +C+ DPE+R T + L H++
Sbjct: 264 FRKMISLCLQKDPEKRPTAAELLRHKF 290
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 22 LAQKPYGKAVDVWSIGVISY-ILLCGYPPFYDENDANLFAQILKGEFEFDAP 72
+A + + A DVWS GV+ + +L G P+++ + ++ + + +G + AP
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRLPAP 276
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 332 ARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILK 64
Y ++DVWS G + LL G P F ++ + +I+K
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 332 ARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGE---FEFDAPYWDDISDSAKD 83
Y D+WS G+ + L G P++ + L+ + E + + K
Sbjct: 199 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS 258
Query: 84 FIRHL-MCV--DPERRFTCKQALAHEW 107
F + + +C+ DPE+R T + L H++
Sbjct: 259 FRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 32 DVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHLMCV 91
DV+S+G + Y +L G PPF ++ ++ Q ++ + + + +S + +
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260
Query: 92 DPERRF 97
+PE R+
Sbjct: 261 NPENRY 266
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 295 ARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 295 ARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 81 AKDFIRHLMCVDPERRFTCKQALAHEWI 108
A+D + ++ +DP +R + AL H +I
Sbjct: 293 ARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 36/117 (30%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDEND--------------ANLFAQILKGEFEFDAP 72
Y ++D+WS+G + ++ PF+ D L+ + K + D P
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLD-P 273
Query: 73 YWDDI---------------------SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+++DI S A D + L+ D ++R T K+A+ H +
Sbjct: 274 HFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|2Q2E|B Chain B, Crystal Structure Of The Topoisomerase Vi Holoenzyme From
Methanosarcina Mazei
Length = 621
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 115 EKNIHGTVSEQLKKNFAKSRWKQAYHATTVIRQMQKMALTSA 156
E N G V EQ+ K FAK + +HA R Q + +++A
Sbjct: 79 EDNGPGIVREQIPKVFAKLLYGSRFHALKQSRGQQGIGISAA 120
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ A+D + ++ +DP +R + AL H +I
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ A+D + ++ +DP +R + AL H +I
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 78 SDSAKDFIRHLMCVDPERRFTCKQALAHEWI 108
+ A+D + ++ +DP +R + AL H +I
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 32 DVWSIGVISYILLCGYPPF---YDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIRHL 88
DVWS+G + Y ++ G P+ + + D+ A + + P S + + +
Sbjct: 228 DVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV----QNQLSIPQSPRHSSALWQLLNSM 283
Query: 89 MCVDPERR 96
M VDP +R
Sbjct: 284 MTVDPHQR 291
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPF 50
+ K DVWS GV+ + LL G PF
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 25 KP-YGKAVDVWSIGVISYILLCGYPPFYD-ENDANLFAQILKGEFEFDAPYWDDISDSAK 82
KP Y DVWS+G+ L G P+ + + D + ++L+ E P S +
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL-LPGHMGFSGDFQ 261
Query: 83 DFIRHLMCVDPERRFTCKQALAHEWI 108
F++ + D +R + L H +I
Sbjct: 262 SFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 241
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 242 KILVENPSARITIPDIKKDRW 262
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 22 LAQKPYGKAVDVWSIGVISY-ILLCGYPPFYDENDANLFAQILKG 65
+A + + A DVWS G++ + ++ G P++D ++ ++ I +G
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 22 LAQKPYGKAVDVWSIGVISY-ILLCGYPPFYDENDANLFAQILKG 65
+A + + A DVWS G++ + ++ G P++D ++ ++ I +G
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 22 LAQKPYGKAVDVWSIGVISY-ILLCGYPPFYDENDANLFAQILKG 65
+A + + A DVWS G++ + ++ G P++D ++ ++ I +G
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 243
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 21 VLAQKPYGKAVDVWSIGVISYILLCGYPPF 50
+L Y +D+W +G I Y + G P F
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 27 YGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGEFEFDAPYWDDISDSAKDFIR 86
+ + VDVWS G++ +L G P+ +D+ K + + P W I + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLH 242
Query: 87 HLMCVDPERRFTCKQALAHEW 107
++ +P R T W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 21 VLAQKPYGKAVDVWSIGVI 39
+L Q+ Y K++D+WS G I
Sbjct: 223 ILLQENYTKSIDIWSTGCI 241
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.131 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,760,481
Number of Sequences: 62578
Number of extensions: 179211
Number of successful extensions: 1526
Number of sequences better than 100.0: 654
Number of HSP's better than 100.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 641
Number of HSP's gapped (non-prelim): 750
length of query: 179
length of database: 14,973,337
effective HSP length: 93
effective length of query: 86
effective length of database: 9,153,583
effective search space: 787208138
effective search space used: 787208138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)