BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4310
(203 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242009196|ref|XP_002425377.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
gi|212509171|gb|EEB12639.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
Length = 501
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/187 (90%), Positives = 175/187 (93%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 284 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 343
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDFLSKGSEQESMARLKR+MTIMDSMNDGELDNRDGAKLF+KQ+ RI RVAQ
Sbjct: 344 MGMIPGFSQDFLSKGSEQESMARLKRVMTIMDSMNDGELDNRDGAKLFTKQSSRIVRVAQ 403
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD+ KNVNQ QM KLNQQMA+MMDP
Sbjct: 404 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDMAKNVNQAQMTKLNQQMARMMDP 463
Query: 196 RVLHQMG 202
RVL QMG
Sbjct: 464 RVLQQMG 470
>gi|332372642|gb|AEE61463.1| unknown [Dendroctonus ponderosae]
Length = 505
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/187 (87%), Positives = 176/187 (94%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEEL+EKIKHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLEDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+SKGSEQESMARLK+LMTIMDSMNDGELD+RDGAK+FSKQ GRI RVAQ
Sbjct: 349 MGMIPGFSQDFMSKGSEQESMARLKKLMTIMDSMNDGELDSRDGAKVFSKQQGRIVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTE+EVK+LI+QYTKFAAVVKKMGGIKGLFKGGD+ KNVNQ QM KLNQQMA+MMDP
Sbjct: 409 GSGVTEREVKELIAQYTKFAAVVKKMGGIKGLFKGGDMGKNVNQNQMAKLNQQMARMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|110763770|ref|XP_624497.2| PREDICTED: signal recognition particle 54 kDa protein-like [Apis
mellifera]
Length = 498
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 161/187 (86%), Positives = 173/187 (92%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQN+MKMGPFSQ+
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+SKG+EQESMARLKR+MTIMDSMND ELDNRDGAKLFSKQ GRITRVAQ
Sbjct: 349 MGMIPGFSQDFMSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRITRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTEKEVKD+I+QYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLN QMAKMMDP
Sbjct: 409 GSGVTEKEVKDVITQYTKFAAVVKKMGGIKGLFKAGDMSKNVNSIQMAKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|383847489|ref|XP_003699385.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Megachile rotundata]
Length = 506
Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 162/187 (86%), Positives = 171/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+ KG+EQES+ RLKRLMTIMDSMND ELDNRDGAKLFSKQ GRI RVAQ
Sbjct: 349 MGMIPGFSQDFMPKGTEQESVVRLKRLMTIMDSMNDSELDNRDGAKLFSKQPGRIVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTEKEVKDLI+QYTKFAAVVKKMGGIKGLFK GD++KNVN TQM KLN QMAKMMDP
Sbjct: 409 GSGVTEKEVKDLITQYTKFAAVVKKMGGIKGLFKAGDMSKNVNSTQMAKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|307199091|gb|EFN79801.1| Signal recognition particle 54 kDa protein [Harpegnathos saltator]
Length = 506
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/187 (86%), Positives = 172/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQNIMKMGPFSQ+
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+SKG+EQESMARLKRLMTIMDSMND ELD+RDGAKLFSKQ GRI RVA+
Sbjct: 349 MGMIPGFSQDFMSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIVRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTEKEVKDLI+QYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLN QMAKMMDP
Sbjct: 409 GSGVTEKEVKDLITQYTKFAAVVKKMGGIKGLFKAGDMAKNVNPTQMAKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|350423805|ref|XP_003493597.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
impatiens]
Length = 506
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/187 (85%), Positives = 172/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQN+MKMGPFSQ+
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+SKG+EQESMARLKR+MTIMDSMND ELDNRDGAKLFSKQ GRI RVAQ
Sbjct: 349 MGMIPGFSQDFMSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRIVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTEKEVKD+I+QYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLN QMAKMMDP
Sbjct: 409 GSGVTEKEVKDVITQYTKFAAVVKKMGGIKGLFKAGDMSKNVNSIQMAKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|91079686|ref|XP_967889.1| PREDICTED: similar to AGAP004610-PA [Tribolium castaneum]
gi|270003347|gb|EEZ99794.1| hypothetical protein TcasGA2_TC002574 [Tribolium castaneum]
Length = 508
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/187 (86%), Positives = 174/187 (93%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEEL+EKIKHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLEDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+SKGSEQESM+RLKRLMTIMDSMND ELD+RDGAK+FSKQ GR+ RVAQ
Sbjct: 349 MGMIPGFSQDFMSKGSEQESMSRLKRLMTIMDSMNDDELDSRDGAKIFSKQNGRVVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTE+EVK+LI+QYTKFAAVVKKMGGIKGLFKGGD+ KNVN QM KLNQQMAKMMDP
Sbjct: 409 GSGVTEREVKELITQYTKFAAVVKKMGGIKGLFKGGDMAKNVNPAQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|307183983|gb|EFN70554.1| Signal recognition particle 54 kDa protein [Camponotus floridanus]
Length = 506
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/187 (86%), Positives = 172/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQNIMKMGPFSQ+
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+SKG+EQESMARLKRLMTIMDSMND ELD+RDGAKLFSKQ GRI RVA+
Sbjct: 349 MGMIPGFSQDFMSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIMRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTEKEVKDLI+QYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLN QMAKMMDP
Sbjct: 409 GSGVTEKEVKDLITQYTKFAAVVKKMGGIKGLFKAGDMAKNVNPTQMAKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|340722086|ref|XP_003399441.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
terrestris]
Length = 506
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 160/187 (85%), Positives = 172/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQN+MKMGPFSQ+
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF+SKG+EQESMARLKR+MTIMDSMND ELDNRDGAKLFSKQ GRI RVAQ
Sbjct: 349 MGMIPGFSQDFMSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRIIRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTEKEVKD+I+QYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLN QMAKMMDP
Sbjct: 409 GSGVTEKEVKDVITQYTKFAAVVKKMGGIKGLFKAGDMSKNVNSIQMAKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|332024403|gb|EGI64601.1| Signal recognition particle 54 kDa protein [Acromyrmex echinatior]
Length = 506
Score = 332 bits (850), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/187 (86%), Positives = 171/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQNIMKMGPFSQ+
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF+SKG+EQESMARLKRLMTIMDSMND ELD+RDGAKLFSKQ GRI RVA+
Sbjct: 349 MNMIPGFSQDFMSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIMRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTEKEVKDLI+QYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLN QMAKMMDP
Sbjct: 409 GSGVTEKEVKDLITQYTKFAAVVKKMGGIKGLFKAGDMAKNVNPTQMAKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|148298873|ref|NP_001091776.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
gi|111608119|gb|ABH10803.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
Length = 501
Score = 328 bits (841), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 160/187 (85%), Positives = 174/187 (93%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+DKVNELKLDDN+EL+EK+KHGQFTLR MYEQFQNIMKMGPFSQI
Sbjct: 289 PFIKKLLGMGDIEGLLDKVNELKLDDNDELLEKLKHGQFTLRAMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQD +SKGSEQESMA+LK LMTIMDSMN+GELDNRDGAKLFSKQ RITRVAQ
Sbjct: 349 MGMIPGFSQDLMSKGSEQESMAKLKLLMTIMDSMNEGELDNRDGAKLFSKQPTRITRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVTE++VKDLI+QYTKFAAVVKKMGGIKGLFKGGD+ KNVNQTQM+KLNQQMAKMMDP
Sbjct: 409 GAGVTERDVKDLIAQYTKFAAVVKKMGGIKGLFKGGDMAKNVNQTQMVKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RLLQQMG 475
>gi|357630058|gb|EHJ78449.1| putative signal recognition particle 54 kDa protein [Danaus
plexippus]
Length = 501
Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/187 (85%), Positives = 174/187 (93%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+DKV+ELKLDDN+EL+EK+KHGQFTLR MYEQFQNIMKMGPFSQI
Sbjct: 289 PFINKLLGMGDIEGLLDKVHELKLDDNDELLEKLKHGQFTLRAMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQD +SKGSEQESMA+LKRLMTIMDSMN+GELD+RDGAKLFSKQ RITRVAQ
Sbjct: 349 MGMIPGFSQDLMSKGSEQESMAKLKRLMTIMDSMNEGELDHRDGAKLFSKQPTRITRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVTE++VKDLI+QYTKFAAVVKKMGGIKGLFKGGD+ KNVNQTQM KLNQQMAKMMDP
Sbjct: 409 GAGVTERDVKDLIAQYTKFAAVVKKMGGIKGLFKGGDMAKNVNQTQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RILQQMG 475
>gi|427783877|gb|JAA57390.1| Putative signal recognition particle subunit srp54 [Rhipicephalus
pulchellus]
Length = 503
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/187 (82%), Positives = 174/187 (93%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFS DF++KG+EQESM RLK+LMTIMDSMND ELD+R+GAKLFS+QTGR+TRVA+
Sbjct: 349 MGMIPGFSSDFMTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT +EV++L++QYTKFAA+VKKMGGIKGLFKGGD+ KNVNQ QM KLNQQMAKMMDP
Sbjct: 409 GAGVTSREVQELLAQYTKFAAMVKKMGGIKGLFKGGDMAKNVNQAQMNKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|346465765|gb|AEO32727.1| hypothetical protein [Amblyomma maculatum]
Length = 518
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/187 (82%), Positives = 174/187 (93%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQFQNIMKMGPFSQI
Sbjct: 304 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQI 363
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFS DF++KG+EQESM RLK+LMTIMDSMND ELD+R+GAKLFS+QTGR+TRVA+
Sbjct: 364 MGMIPGFSSDFMTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVAR 423
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT +EV++L++QYTKFAA+VKKMGGIKGLFKGGD+ KNVNQ QM KLNQQMAKMMDP
Sbjct: 424 GAGVTTREVQELLAQYTKFAAMVKKMGGIKGLFKGGDMAKNVNQAQMNKLNQQMAKMMDP 483
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 484 RVLHQMG 490
>gi|427792757|gb|JAA61830.1| Putative signal recognition particle subunit srp54, partial
[Rhipicephalus pulchellus]
Length = 474
Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 155/187 (82%), Positives = 174/187 (93%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQFQNIMKMGPFSQI
Sbjct: 260 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQI 319
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFS DF++KG+EQESM RLK+LMTIMDSMND ELD+R+GAKLFS+QTGR+TRVA+
Sbjct: 320 MGMIPGFSSDFMTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVAR 379
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT +EV++L++QYTKFAA+VKKMGGIKGLFKGGD+ KNVNQ QM KLNQQMAKMMDP
Sbjct: 380 GAGVTSREVQELLAQYTKFAAMVKKMGGIKGLFKGGDMAKNVNQAQMNKLNQQMAKMMDP 439
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 440 RVLHQMG 446
>gi|193580274|ref|XP_001951515.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Acyrthosiphon pisum]
gi|328716940|ref|XP_003246080.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Acyrthosiphon pisum]
Length = 504
Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 157/187 (83%), Positives = 172/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEKIKHGQFT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLEDNEELIEKIKHGQFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDFLSKGSE ESMARLK+LMTIMDSMNDGELD+RDGAKLF+KQ GRI RV+Q
Sbjct: 349 MGMIPGFSQDFLSKGSEMESMARLKKLMTIMDSMNDGELDHRDGAKLFTKQPGRIIRVSQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVTE+EV++LISQYTKFA VVKKMGGIKGLFK GD++KNVN +QM KLNQQ+ KMMDP
Sbjct: 409 GAGVTEREVRELISQYTKFAGVVKKMGGIKGLFKSGDMSKNVNPSQMAKLNQQITKMMDP 468
Query: 196 RVLHQMG 202
RVL Q+G
Sbjct: 469 RVLQQIG 475
>gi|312381041|gb|EFR26883.1| hypothetical protein AND_06742 [Anopheles darlingi]
Length = 560
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/187 (82%), Positives = 172/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI+KIKHGQFT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF++KG EQESMAR+KRLMT+MDSM+DGELDN+DGAKLFSKQ R+TRVAQ
Sbjct: 349 MGMIPGFSQDFMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVTRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV E+EV+DLISQYTKFAAV+KKMGGIKGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 409 GSGVMEREVRDLISQYTKFAAVIKKMGGIKGLFKSGDMTKNVNATQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+ QMG
Sbjct: 469 RMFQQMG 475
>gi|58386979|ref|XP_315212.2| AGAP004610-PA [Anopheles gambiae str. PEST]
gi|55239546|gb|EAA10561.2| AGAP004610-PA [Anopheles gambiae str. PEST]
Length = 504
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/187 (82%), Positives = 172/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI+KIKHGQFT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF++KG EQESMAR+KRLMT+MDSM+DGELDN+DGAKLFSKQ R+TRVAQ
Sbjct: 349 MGMIPGFSQDFMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVTRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV E+EV+DLISQYTKFAAV+KKMGGIKGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 409 GSGVMEREVRDLISQYTKFAAVIKKMGGIKGLFKSGDMTKNVNPTQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+ QMG
Sbjct: 469 RMFQQMG 475
>gi|321462130|gb|EFX73155.1| hypothetical protein DAPPUDRAFT_325390 [Daphnia pulex]
Length = 506
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 156/187 (83%), Positives = 171/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + +GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQF NIMKMGPFSQI
Sbjct: 289 PFISKLLGLGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFTNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF++KG EQESMARLK+LMTIMDSMND ELD++DGAKLFSKQ R+ RVA+
Sbjct: 349 MGMIPGFSQDFMTKGGEQESMARLKKLMTIMDSMNDSELDHQDGAKLFSKQPTRMARVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTE+EVK+LISQYTKFAAVVKKMGGIKGLFKGGD+TKNVN TQM KLNQQMA+MMDP
Sbjct: 409 GSGVTEREVKELISQYTKFAAVVKKMGGIKGLFKGGDMTKNVNPTQMAKLNQQMARMMDP 468
Query: 196 RVLHQMG 202
VL +MG
Sbjct: 469 SVLQRMG 475
>gi|157134401|ref|XP_001663285.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108870487|gb|EAT34712.1| AAEL013076-PA [Aedes aegypti]
Length = 401
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 171/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEELI+KIKHGQFT+RDMYEQFQNIMKMGPFSQI
Sbjct: 186 PFISKLLGMGDIEGLIDKVNELNLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 245
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF++KG EQESMAR+KRLMT+MDSM+DGELDN+DGAKLFSKQ R+ RVAQ
Sbjct: 246 MGMIPGFSQDFMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVIRVAQ 305
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVTE+EV+DLISQYTKFAAV+KKMGGIKGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 306 GSGVTEREVRDLISQYTKFAAVIKKMGGIKGLFKSGDMTKNVNPTQMAKLNQQMAKMIDP 365
Query: 196 RVLHQMG 202
R+ QMG
Sbjct: 366 RMFQQMG 372
>gi|387916030|gb|AFK11624.1| signal recognition particle protein [Callorhinchus milii]
Length = 504
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/187 (81%), Positives = 171/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELDN+DGAKLFSKQ GRI RVA+
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVTTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|442752199|gb|JAA68259.1| Putative signal recognition particle subunit srp54 [Ixodes ricinus]
Length = 503
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/187 (81%), Positives = 171/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFS DF++KG+EQESM RLK+LMTIMDSMND ELD+R+GAKLFS+QTGR TR A+
Sbjct: 349 MGMIPGFSSDFMTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRGTRGAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT +EV++L++QYTKFAA+VKKMGGIKGLFKGGD+ KNVN QM KLNQQMAKMMDP
Sbjct: 409 GAGVTTREVQELLAQYTKFAAMVKKMGGIKGLFKGGDMAKNVNPAQMNKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLHQMG
Sbjct: 469 RVLHQMG 475
>gi|170046875|ref|XP_001850971.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
gi|167869479|gb|EDS32862.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
Length = 515
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 171/187 (91%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLI+KVN+L LDDNEELI+KIKHGQFT+RDMYEQFQNIMKMGPFSQI
Sbjct: 300 PFISKLLGMGDIEGLIEKVNDLNLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 359
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF++KG EQESMAR+KRLMT+MDSM+DGELDN+DGAKLFSKQ R+ RVAQ
Sbjct: 360 MGMIPGFSQDFMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVVRVAQ 419
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV+DLI+QYTKFAAV+KKMGGIKGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 420 GSGVTDREVRDLITQYTKFAAVIKKMGGIKGLFKSGDMTKNVNPTQMAKLNQQMAKMIDP 479
Query: 196 RVLHQMG 202
R+ QMG
Sbjct: 480 RMFQQMG 486
>gi|45360609|ref|NP_988977.1| signal recognition particle 54kDa [Xenopus (Silurana) tropicalis]
gi|38174419|gb|AAH61368.1| signal recognition particle 54 [Xenopus (Silurana) tropicalis]
Length = 504
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/187 (79%), Positives = 169/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF QDF+SKG+EQESMARLK+LMTIMDSMND ELDN DGAKLFSKQ GR+ RVA+
Sbjct: 349 LGMIPGFGQDFMSKGNEQESMARLKKLMTIMDSMNDQELDNTDGAKLFSKQPGRVQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLAQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVL MG
Sbjct: 469 RVLQHMG 475
>gi|431907352|gb|ELK11325.1| Signal recognition particle 54 kDa protein [Pteropus alecto]
Length = 438
Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 169/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 184 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 243
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 244 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 303
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 304 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 363
Query: 196 RVLHQMG 202
RVLH M
Sbjct: 364 RVLHHMA 370
>gi|41055859|ref|NP_957282.1| signal recognition particle 54 kDa protein [Danio rerio]
gi|28277732|gb|AAH45474.1| Signal recognition particle 54 [Danio rerio]
gi|45709065|gb|AAH67588.1| Signal recognition particle 54 [Danio rerio]
gi|182891276|gb|AAI64217.1| Srp54 protein [Danio rerio]
Length = 504
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/187 (79%), Positives = 168/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELDN+DGAKLFSKQ RI RVA+
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVATRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|348572227|ref|XP_003471895.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 54 kDa
protein-like [Cavia porcellus]
Length = 504
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|4507215|ref|NP_003127.1| signal recognition particle 54 kDa protein isoform 1 [Homo sapiens]
gi|50979080|ref|NP_001003272.1| signal recognition particle 54 kDa protein [Canis lupus familiaris]
gi|84000369|ref|NP_001033290.1| signal recognition particle 54 kDa protein [Bos taurus]
gi|197103004|ref|NP_001126912.1| signal recognition particle 54 kDa protein [Pongo abelii]
gi|386780792|ref|NP_001247781.1| signal recognition particle 54 kDa protein [Macaca mulatta]
gi|114652592|ref|XP_001136048.1| PREDICTED: signal recognition particle 54 kDa protein isoform 5
[Pan troglodytes]
gi|149410337|ref|XP_001511597.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Ornithorhynchus anatinus]
gi|149692831|ref|XP_001491075.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Equus caballus]
gi|296214799|ref|XP_002753859.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Callithrix jacchus]
gi|301774887|ref|XP_002922872.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Ailuropoda melanoleuca]
gi|332229141|ref|XP_003263750.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Nomascus leucogenys]
gi|335292471|ref|XP_001927834.3| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Sus scrofa]
gi|344274150|ref|XP_003408881.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Loxodonta africana]
gi|395838229|ref|XP_003792021.1| PREDICTED: signal recognition particle 54 kDa protein [Otolemur
garnettii]
gi|397501115|ref|XP_003821240.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Pan paniscus]
gi|402875937|ref|XP_003901747.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Papio anubis]
gi|410048161|ref|XP_003952519.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|426248376|ref|XP_004017939.1| PREDICTED: signal recognition particle 54 kDa protein [Ovis aries]
gi|46577649|sp|P61010.1|SRP54_CANFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|46577650|sp|P61011.1|SRP54_HUMAN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68731680|sp|Q5R4R6.1|SRP54_PONAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|73621949|sp|Q4R965.1|SRP54_MACFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|122142857|sp|Q2T9U1.1|SRP54_BOVIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119390387|pdb|2J37|W Chain W, Model Of Mammalian Srp Bound To 80s Rncs
gi|930|emb|CAA34385.1| unnamed protein product [Canis lupus familiaris]
gi|784999|emb|CAA60132.1| SRP 54 [Homo sapiens]
gi|1256820|gb|AAC50994.1| signal recognition particle [Homo sapiens]
gi|12653733|gb|AAH00652.1| Signal recognition particle 54kDa [Homo sapiens]
gi|13097267|gb|AAH03389.1| Signal recognition particle 54kDa [Homo sapiens]
gi|55733132|emb|CAH93250.1| hypothetical protein [Pongo abelii]
gi|67967747|dbj|BAE00356.1| unnamed protein product [Macaca fascicularis]
gi|83405301|gb|AAI11271.1| Signal recognition particle 54kDa [Bos taurus]
gi|90076082|dbj|BAE87721.1| unnamed protein product [Macaca fascicularis]
gi|90076300|dbj|BAE87830.1| unnamed protein product [Macaca fascicularis]
gi|177771971|gb|ACB73260.1| signal recognition particle (predicted) [Rhinolophus ferrumequinum]
gi|189053540|dbj|BAG35706.1| unnamed protein product [Homo sapiens]
gi|296475353|tpg|DAA17468.1| TPA: signal recognition particle 54 kDa protein [Bos taurus]
gi|325464281|gb|ADZ15911.1| signal recognition particle 54kDa [synthetic construct]
gi|351700055|gb|EHB02974.1| Signal recognition particle 54 kDa protein [Heterocephalus glaber]
gi|355693216|gb|EHH27819.1| hypothetical protein EGK_18109 [Macaca mulatta]
gi|355778517|gb|EHH63553.1| hypothetical protein EGM_16545 [Macaca fascicularis]
gi|380815890|gb|AFE79819.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|383421049|gb|AFH33738.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|384948994|gb|AFI38102.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|410210342|gb|JAA02390.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410264744|gb|JAA20338.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410294232|gb|JAA25716.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410353847|gb|JAA43527.1| signal recognition particle 54kDa [Pan troglodytes]
gi|417402010|gb|JAA47866.1| Putative signal recognition particle subunit srp54 [Desmodus
rotundus]
gi|440909283|gb|ELR59207.1| Signal recognition particle 54 kDa protein [Bos grunniens mutus]
gi|226429|prf||1512310A SRP protein 54kD
Length = 504
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|209153928|gb|ACI33196.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 168/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELDN+DGAKLF+KQ RI RVA+
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFTKQPNRIARVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVATRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|410962045|ref|XP_003987587.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Felis catus]
Length = 526
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 311 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 370
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 371 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 430
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 431 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 490
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 491 RVLHHMG 497
>gi|62899020|ref|NP_446323.1| signal recognition particle 54 kDa protein [Rattus norvegicus]
gi|73621950|sp|Q6AYB5.1|SRP54_RAT RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|50925703|gb|AAH79117.1| Signal recognition particle 54a [Rattus norvegicus]
Length = 504
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|355721868|gb|AES07403.1| signal recognition particle 54kDa [Mustela putorius furo]
Length = 502
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 288 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 347
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 348 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 407
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 408 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 467
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 468 RVLHHMG 474
>gi|54194|emb|CAA34386.1| unnamed protein product [Mus musculus]
Length = 504
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|410962043|ref|XP_003987586.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Felis catus]
Length = 504
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|31981338|ref|NP_036029.2| signal recognition particle 54 kDa protein [Mus musculus]
gi|153791789|ref|NP_001093579.1| signal recognition particle 54 kDa protein [Mus musculus]
gi|73622264|sp|P14576.2|SRP54_MOUSE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|12848354|dbj|BAB27921.1| unnamed protein product [Mus musculus]
gi|18043829|gb|AAH19683.1| Signal recognition particle 54a [Mus musculus]
gi|74193669|dbj|BAE22786.1| unnamed protein product [Mus musculus]
Length = 504
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|126283547|ref|XP_001363021.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
gi|334324872|ref|XP_003340575.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
Length = 504
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|426376696|ref|XP_004055129.1| PREDICTED: signal recognition particle 54 kDa protein [Gorilla
gorilla gorilla]
Length = 502
Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 287 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 346
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 347 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 406
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 407 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 466
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 467 RVLHHMG 473
>gi|194373485|dbj|BAG56838.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 251 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 310
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 311 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 370
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 371 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 430
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 431 RVLHHMG 437
>gi|281342878|gb|EFB18462.1| hypothetical protein PANDA_011888 [Ailuropoda melanoleuca]
Length = 488
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 273 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 332
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 333 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 392
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 393 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 452
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 453 RVLHHMG 459
>gi|349605055|gb|AEQ00420.1| Signal recognition particle 54 kDa protein-like protein, partial
[Equus caballus]
Length = 454
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 239 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 298
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 299 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 358
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 359 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 418
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 419 RVLHHMG 425
>gi|296214803|ref|XP_002753861.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Callithrix jacchus]
gi|345306152|ref|XP_003428427.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Ornithorhynchus anatinus]
Length = 455
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 240 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 299
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 300 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 359
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 360 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 419
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 420 RVLHHMG 426
>gi|226371618|ref|NP_001139754.1| signal recognition particle 54 kDa protein isoform 2 [Homo sapiens]
gi|332229143|ref|XP_003263751.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Nomascus leucogenys]
gi|335292473|ref|XP_003356739.1| PREDICTED: signal recognition particle 54 kDa protein [Sus scrofa]
gi|338717903|ref|XP_003363720.1| PREDICTED: signal recognition particle 54 kDa protein [Equus
caballus]
gi|397501117|ref|XP_003821241.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Pan paniscus]
gi|402875939|ref|XP_003901748.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Papio anubis]
gi|410048163|ref|XP_003952520.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|194374727|dbj|BAG62478.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 240 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 299
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 300 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 359
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 360 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 419
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 420 RVLHHMG 426
>gi|344274152|ref|XP_003408882.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Loxodonta africana]
Length = 455
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 240 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 299
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 300 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 359
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 360 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 419
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 420 RVLHHMG 426
>gi|410962047|ref|XP_003987588.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Felis catus]
Length = 455
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 240 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 299
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 300 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 359
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 360 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 419
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 420 RVLHHMG 426
>gi|417410790|gb|JAA51861.1| Putative signal recognition particle subunit srp54, partial
[Desmodus rotundus]
Length = 448
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 233 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 292
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 293 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 352
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 353 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 412
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 413 RVLHHMG 419
>gi|197631999|gb|ACH70723.1| signal recognition particle 54 [Salmo salar]
gi|209154348|gb|ACI33406.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 167/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELDN+DGAKLFSK RI RVA+
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKGPNRIARVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVATRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|343960623|dbj|BAK61901.1| signal recognition particle 54 kDa protein [Pan troglodytes]
Length = 504
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD+NE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDNNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|50748422|ref|XP_421238.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Gallus gallus]
gi|224051427|ref|XP_002200552.1| PREDICTED: signal recognition particle 54 kDa protein [Taeniopygia
guttata]
Length = 504
Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 169/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +Q+ KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQLAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|403264840|ref|XP_003924676.1| PREDICTED: signal recognition particle 54 kDa protein [Saimiri
boliviensis boliviensis]
Length = 567
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/186 (79%), Positives = 169/186 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 281 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 340
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 341 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 400
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 401 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 460
Query: 196 RVLHQM 201
RVLH M
Sbjct: 461 RVLHHM 466
>gi|348539542|ref|XP_003457248.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Oreochromis niloticus]
Length = 504
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 168/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLID+VNELKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDRVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD++DGAKLFSKQ RI RVA+
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVATRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|363734109|ref|XP_003641340.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Gallus gallus]
Length = 455
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 169/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 240 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 299
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 300 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 359
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +Q+ KLNQQMAKMMDP
Sbjct: 360 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQLAKLNQQMAKMMDP 419
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 420 RVLHHMG 426
>gi|326920725|ref|XP_003206619.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Meleagris gallopavo]
Length = 474
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 169/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 259 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 318
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 319 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 378
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +Q+ KLNQQMAKMMDP
Sbjct: 379 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQLAKLNQQMAKMMDP 438
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 439 RVLHHMG 445
>gi|327291942|ref|XP_003230679.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Anolis carolinensis]
Length = 425
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 169/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 210 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 269
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARL++LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 270 LGMIPGFGTDFMSKGNEQESMARLRKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 329
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 330 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 389
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 390 RVLHHMG 396
>gi|395504261|ref|XP_003756474.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Sarcophilus harrisii]
Length = 418
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 147/186 (79%), Positives = 169/186 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 127 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 186
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 187 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 246
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 247 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 306
Query: 196 RVLHQM 201
RVLH M
Sbjct: 307 RVLHHM 312
>gi|226430|prf||1512311A SRP protein 54kD
Length = 504
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 169/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSM D ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMWDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|410898714|ref|XP_003962842.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Takifugu rubripes]
Length = 504
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 168/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLID+VN+LKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDRVNDLKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD++DGAKLFSKQ RI RVA+
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVATRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|449274766|gb|EMC83844.1| Signal recognition particle 54 kDa protein, partial [Columba livia]
Length = 500
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/186 (78%), Positives = 168/186 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +Q+ KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQLAKLNQQMAKMMDP 468
Query: 196 RVLHQM 201
RVLH M
Sbjct: 469 RVLHHM 474
>gi|410898716|ref|XP_003962843.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Takifugu rubripes]
Length = 455
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 168/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLID+VN+LKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 240 PFISKLLGMGDIEGLIDRVNDLKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQI 299
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD++DGAKLFSKQ RI RVA+
Sbjct: 300 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVAR 359
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 360 GSGVATRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 419
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 420 RVLHHMG 426
>gi|153791464|ref|NP_001093580.1| signal recognition particle 54C [Mus musculus]
Length = 504
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 168/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN+ LIEK KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSK GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ +++++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDIQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|26354843|dbj|BAC41048.1| unnamed protein product [Mus musculus]
Length = 502
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 168/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN+ LIEK KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSK GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ +++++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDIQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|47214799|emb|CAF89626.1| unnamed protein product [Tetraodon nigroviridis]
Length = 514
Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 146/188 (77%), Positives = 167/188 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLID+VN+LKLDDNE+LI K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDRVNDLKLDDNEDLINKLKHGQFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD +DGAKLFSKQ RI RVA+
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDCKDGAKLFSKQPNRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGVATRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMGE 203
RVLH MGE
Sbjct: 469 RVLHHMGE 476
>gi|156407984|ref|XP_001641637.1| predicted protein [Nematostella vectensis]
gi|156228776|gb|EDO49574.1| predicted protein [Nematostella vectensis]
Length = 498
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 167/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELI+K+KHG F+LRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLEDNEELIDKLKHGVFSLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFS DFLSKG+EQESMARLKRLMTIMDSMND ELD+ +GAKLF++Q GR TRVA+
Sbjct: 349 MGMIPGFSSDFLSKGNEQESMARLKRLMTIMDSMNDQELDSPNGAKLFTRQPGRTTRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ +EV++L+SQY KFA +VKKMGGIKGLFKGGD+T+NVN TQM KLN QMAKMMDP
Sbjct: 409 GSGVSVREVQELLSQYQKFAQMVKKMGGIKGLFKGGDMTRNVNPTQMTKLNHQMAKMMDP 468
Query: 196 RVLHQMG 202
RVL QMG
Sbjct: 469 RVLQQMG 475
>gi|13542673|gb|AAH05543.1| Srp54c protein [Mus musculus]
Length = 500
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 167/186 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN+ LIEK KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSK GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ +++++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDIQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQM 201
RVLH M
Sbjct: 469 RVLHHM 474
>gi|148223543|ref|NP_001080564.1| signal recognition particle 54kDa [Xenopus laevis]
gi|27924197|gb|AAH44991.1| Srp54 protein [Xenopus laevis]
Length = 504
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 167/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNE +I+K+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEAMIDKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF QDF+SKG+EQESMARLK+LMTIMDSMND ELDN DGAK+F+KQ GR+ RVA+
Sbjct: 349 LGMIPGFGQDFMSKGNEQESMARLKKLMTIMDSMNDLELDNTDGAKVFTKQPGRVQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+G + ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GSGASARDVQELLAQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVL MG
Sbjct: 469 RVLQHMG 475
>gi|405977168|gb|EKC41631.1| Signal recognition particle 54 kDa protein [Crassostrea gigas]
Length = 504
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 167/187 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE+L++K+K GQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDDNEDLMKKLKQGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFS DFL+KG EQESMARLK+LMTIMDSMND ELD+ DG +LF++QTGRI RVA+
Sbjct: 349 MGMIPGFSSDFLTKGGEQESMARLKKLMTIMDSMNDKELDSLDGERLFTRQTGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV+ +EV +L++QY KFA +VKKMGGIKGLFKGGD++KNVN +QM KLNQQMAKMMDP
Sbjct: 409 GAGVSIREVNELLAQYKKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVL QMG
Sbjct: 469 RVLQQMG 475
>gi|291403728|ref|XP_002718183.1| PREDICTED: signal recognition particle 54kDa isoform 1 [Oryctolagus
cuniculus]
Length = 504
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 166/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKG I++NVNQ+ KLNQQMAKMMDP
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGKKISENVNQSPDAKLNQQMAKMMDP 468
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 469 RVLHHMG 475
>gi|291403730|ref|XP_002718184.1| PREDICTED: signal recognition particle 54kDa isoform 2 [Oryctolagus
cuniculus]
Length = 455
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 166/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 240 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 299
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 300 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 359
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKG I++NVNQ+ KLNQQMAKMMDP
Sbjct: 360 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGKKISENVNQSPDAKLNQQMAKMMDP 419
Query: 196 RVLHQMG 202
RVLH MG
Sbjct: 420 RVLHHMG 426
>gi|289740969|gb|ADD19232.1| signal recognition particle subunit srp54 [Glossina morsitans
morsitans]
Length = 508
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 170/187 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHGQFT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGQFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFSQDF++KG EQESMAR+KR+MT+MDSM+DGELDNRDGAKLFSKQ RI RVAQ
Sbjct: 349 MGMIPGFSQDFMTKGGEQESMARIKRMMTMMDSMSDGELDNRDGAKLFSKQPTRIVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV E+EVK+LIS YTKFAAVVKKMGG+KGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 409 GSGVLEREVKELISHYTKFAAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|391347716|ref|XP_003748101.1| PREDICTED: uncharacterized protein LOC100903576 [Metaseiulus
occidentalis]
Length = 1627
Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 136/179 (75%), Positives = 160/179 (89%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GDIEGLIDKVNELKLD+N ELIEK+KHG+FTLRDMYEQFQNIMKMGPF+Q+MGMIPGFS
Sbjct: 297 LGDIEGLIDKVNELKLDENHELIEKLKHGEFTLRDMYEQFQNIMKMGPFNQLMGMIPGFS 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
DF++KG+EQESM+RLKRLMTIMDSM D ELDNR+GA++F+KQ RITRVA+GAG T E
Sbjct: 357 ADFMTKGNEQESMSRLKRLMTIMDSMTDDELDNREGARMFAKQQTRITRVARGAGCTTFE 416
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V +L++QYTKFA +VKKMGG+KGLFKG D+ KNVN M KL+ +MAKM+DPRVL QMG
Sbjct: 417 VHELLNQYTKFAGMVKKMGGMKGLFKGNDLAKNVNPAHMNKLSAEMAKMIDPRVLQQMG 475
>gi|386697089|gb|AFJ22005.1| signal recognition particle protein 54k, partial [Ptyctima gen. sp.
AD1287]
Length = 464
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 143/183 (78%), Positives = 163/183 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RV++
Sbjct: 342 LNMIPGFGADLVKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIQRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT+KEV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVNQTQMMKLNQQMAKMMDP
Sbjct: 402 GSGVTQKEVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNQTQMMKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|196016017|ref|XP_002117863.1| signal recognition particle 54 [Trichoplax adhaerens]
gi|190579532|gb|EDV19625.1| signal recognition particle 54 [Trichoplax adhaerens]
Length = 505
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 164/187 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV ELKLD+NEELIEK+KHGQFTLRDMYEQFQNIMKMGPF+QI
Sbjct: 289 PFISKLLGMGDIEGLIDKVTELKLDENEELIEKLKHGQFTLRDMYEQFQNIMKMGPFNQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF +F+SKG+EQ+SM RLKRLMTIMDSMND ELDNRDGAK FS+ GR RVA+
Sbjct: 349 IGMIPGFGPEFMSKGNEQDSMKRLKRLMTIMDSMNDEELDNRDGAKFFSRTPGRTQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV+ +EV +L+SQ+TKFA VVKKMGGIKGLFKGGD+ KNVN +QM KLNQQM++M+DP
Sbjct: 409 GAGVSIREVHELLSQHTKFAQVVKKMGGIKGLFKGGDMNKNVNPSQMAKLNQQMSRMIDP 468
Query: 196 RVLHQMG 202
RVL QMG
Sbjct: 469 RVLQQMG 475
>gi|386697081|gb|AFJ22001.1| signal recognition particle protein 54k, partial [Hypochthonius
luteus]
Length = 464
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/183 (77%), Positives = 161/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPFSQI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFSQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESMARLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RVA+
Sbjct: 342 LNMIPGFGADLMRGASEAESMARLKRLMTIMDSMSDSELDSREGAKLFTKQPLRIQRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVK+MGGIKGLFKGGD+ KNVNQ QM KLNQQMAKMMDP
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKRMGGIKGLFKGGDMAKNVNQAQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697071|gb|AFJ21996.1| signal recognition particle protein 54k, partial [Stigmalychus sp.
AD1318]
Length = 464
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/183 (77%), Positives = 162/183 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN+ELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNQELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESMARLKRLMT+MDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLVKGASEAESMARLKRLMTMMDSMSDNELDSREGAKLFSKQPTRIQRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+TKNVNQ QM KLNQQMAKMMDP
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMTKNVNQAQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697079|gb|AFJ22000.1| signal recognition particle protein 54k, partial [Eohypochthonius
(sen. str.) sp. AD1321]
Length = 464
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/183 (77%), Positives = 161/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESMARLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RVA+
Sbjct: 342 LNMIPGFGADLMKGASEAESMARLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIQRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVK+MGGIKGLFKGGD+ KNVNQ QM KLNQQMAKMMDP
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKRMGGIKGLFKGGDMAKNVNQAQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697087|gb|AFJ22004.1| signal recognition particle protein 54k, partial [Cosmochthonius
lanatus]
Length = 464
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 142/183 (77%), Positives = 160/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLIKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAK 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT+KEV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN QM KLNQQMAKMMDP
Sbjct: 402 GSGVTQKEVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNPAQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697091|gb|AFJ22006.1| signal recognition particle protein 54k, partial [Gehypochthonius
sp. AD1358]
Length = 464
Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 142/183 (77%), Positives = 160/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD+NEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDENEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLMKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFSKQPTRIARVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT +EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN QMMKLNQQMAKMMDP
Sbjct: 402 GAGVTFREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNPAQMMKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697093|gb|AFJ22007.1| signal recognition particle protein 54k, partial [Camisia segnis]
Length = 464
Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 161/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RV++
Sbjct: 342 LNMIPGFGADLVKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN TQM KLNQQMAKMMDP
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNSTQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697073|gb|AFJ21997.1| signal recognition particle protein 54k, partial [Ctenacarus sp. 1
PBK-2011]
Length = 460
Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 160/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 278 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLFSKQT RI RVA+
Sbjct: 338 LNMIPGFGADLMKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFSKQTTRIQRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+G T++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+TKNVN Q+ KLNQQMAKMMDP
Sbjct: 398 GSGATQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMTKNVNPAQLAKLNQQMAKMMDP 457
Query: 196 RVL 198
R L
Sbjct: 458 RAL 460
>gi|386697099|gb|AFJ22010.1| signal recognition particle protein 54k, partial [Trhypochthonius
americanus]
Length = 460
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 161/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 278 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RV++
Sbjct: 338 LNMIPGFGADLVKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN TQM KLNQQMAKMMDP
Sbjct: 398 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNSTQMAKLNQQMAKMMDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697095|gb|AFJ22008.1| signal recognition particle protein 54k, partial [Malaconothrus
gracilis]
Length = 464
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 161/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RV++
Sbjct: 342 LNMIPGFGADLVKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN TQM KLNQQMAKMMDP
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNSTQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697101|gb|AFJ22011.1| signal recognition particle protein 54k, partial [Trhypochthonius
cladonicola]
Length = 464
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 161/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RV++
Sbjct: 342 LNMIPGFGADLVKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN TQM KLNQQMAKMMDP
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNSTQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697103|gb|AFJ22012.1| signal recognition particle protein 54k, partial [Anachipteria sp.
AD1103]
Length = 460
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/183 (75%), Positives = 161/183 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 278 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RV++
Sbjct: 338 LNMIPGFGADLMKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPNRIIRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLF+GGD+ KNVN TQM KLNQQMAKMMDP
Sbjct: 398 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFRGGDMAKNVNPTQMAKLNQQMAKMMDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697075|gb|AFJ21998.1| signal recognition particle protein 54k, partial [Liochthonius sp.
AD1300]
Length = 464
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/183 (77%), Positives = 159/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGP +QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPLNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESMARLKRLMTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGADLIKGASEAESMARLKRLMTIMDSMSDSELDSREGAKLFSKQMPRMVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT +EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN QMMKLNQQMAKMMDP
Sbjct: 402 GSGVTTREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNPAQMMKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697077|gb|AFJ21999.1| signal recognition particle protein 54k, partial [Brachychthoniidae
gen. sp. 3 AD1301]
Length = 464
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/183 (77%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGP +QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPLNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESMARLKRLMTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGADLIKGASEAESMARLKRLMTIMDSMSDSELDSREGAKLFSKQAPRMVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT KEV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN QM KLNQQMAKMMDP
Sbjct: 402 GSGVTTKEVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNPAQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697083|gb|AFJ22002.1| signal recognition particle protein 54k, partial [Eniochthonius sp.
AD1066]
Length = 459
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/182 (76%), Positives = 159/182 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 278 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RVA+
Sbjct: 338 LNMIPGFGADLIKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPSRIQRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN QM KLNQQMAKMMDP
Sbjct: 398 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNPAQMAKLNQQMAKMMDP 457
Query: 196 RV 197
RV
Sbjct: 458 RV 459
>gi|386697085|gb|AFJ22003.1| signal recognition particle protein 54k, partial [Haplochthonius
simplex]
Length = 464
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/183 (77%), Positives = 159/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLIKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFSKQPLRIQRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT+KEV++L++QYTKFAAVVKKMGGIKGLFK GDI KNVN QM KLNQQMAKMMDP
Sbjct: 402 GSGVTQKEVQELLTQYTKFAAVVKKMGGIKGLFKSGDIGKNVNPAQMAKLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697069|gb|AFJ21995.1| signal recognition particle protein 54k, partial [Alicorhagia sp.
AD1316]
Length = 464
Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 163/183 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD+NEELIEK+KHG+FTLRDMYEQF NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDENEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+++GAK+F+KQ RI RVA+
Sbjct: 342 LNMIPGFGADLVKGASEAESMSRLKRLMTIMDSMSDSELDSKEGAKIFTKQATRIQRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+TKNVNQ QMMKLNQQMAKMM+P
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMTKNVNQAQMMKLNQQMAKMMNP 461
Query: 196 RVL 198
+VL
Sbjct: 462 QVL 464
>gi|195127379|ref|XP_002008146.1| GI13333 [Drosophila mojavensis]
gi|193919755|gb|EDW18622.1| GI13333 [Drosophila mojavensis]
Length = 508
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/187 (79%), Positives = 166/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHG FT+RDMYEQFQNI+KMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGHFTIRDMYEQFQNILKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R TRVA
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCTRVAH 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKFAAVVKKMGG+KGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 409 GAGVIEREVKELIAHYTKFAAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|30580515|sp|Q8MZJ6.1|SRP54_GEOCY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|20750404|gb|AAM23234.1| signal recognition particle 54 kD protein [Geodia cydonium]
Length = 499
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/187 (73%), Positives = 166/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGD+EGL++KV++LKLD+NEEL++K+KHGQFTLRDMYEQFQNIMKMGPF+QI
Sbjct: 288 PFVSKLLGMGDLEGLMEKVSDLKLDENEELMDKLKHGQFTLRDMYEQFQNIMKMGPFNQI 347
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGFS DF+SKG+E+ESMA+LKRLMT+MDSMNDGELD+ +GAKLFSKQ GR RVA+
Sbjct: 348 IGMIPGFSPDFMSKGNERESMAKLKRLMTMMDSMNDGELDHPNGAKLFSKQPGRAARVAR 407
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+G + +EV +L+ QY+ F+A VKKMGGIKGLFKGGD+ KNVN +QM KLNQQMAKMMDP
Sbjct: 408 GSGTSVREVNELLKQYSNFSATVKKMGGIKGLFKGGDLGKNVNPSQMAKLNQQMAKMMDP 467
Query: 196 RVLHQMG 202
RVL QMG
Sbjct: 468 RVLQQMG 474
>gi|195441672|ref|XP_002068627.1| GK20323 [Drosophila willistoni]
gi|194164712|gb|EDW79613.1| GK20323 [Drosophila willistoni]
Length = 508
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/187 (79%), Positives = 166/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHG FT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGCEQESMARMKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV E+EVK+LI+ YTKFAAVVKKMGG+KGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 409 GSGVIEREVKELIAHYTKFAAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|195376317|ref|XP_002046943.1| GJ13160 [Drosophila virilis]
gi|194154101|gb|EDW69285.1| GJ13160 [Drosophila virilis]
Length = 508
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/187 (79%), Positives = 165/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHG FT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVA
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCIRVAH 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKFAAVVKKMGG+KGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 409 GAGVIEREVKELIAHYTKFAAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|195491937|ref|XP_002093779.1| GE21487 [Drosophila yakuba]
gi|194179880|gb|EDW93491.1| GE21487 [Drosophila yakuba]
Length = 508
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 166/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHG FT+RDMYEQFQNIMKMGPFSQ
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQF 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQT R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQTNRCVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKF+AVVKKMGG+KGLFK GD+TKNVN TQM KLNQQ+AKM+DP
Sbjct: 409 GAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQIAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|194750277|ref|XP_001957554.1| GF23972 [Drosophila ananassae]
gi|190624836|gb|EDV40360.1| GF23972 [Drosophila ananassae]
Length = 508
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/187 (79%), Positives = 165/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHG FT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARIKRMMTMMDSMSDNELDNRDGAKLFSKQPTRSVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKFAAVVKKMGG+KGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 409 GAGVLEREVKELIAHYTKFAAVVKKMGGVKGLFKQGDMTKNVNPNQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|194866950|ref|XP_001971975.1| GG15264 [Drosophila erecta]
gi|190653758|gb|EDV51001.1| GG15264 [Drosophila erecta]
Length = 508
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 166/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHG FT+RDMYEQFQNIMKMGPFSQ
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQF 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQT R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQTNRCVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKF+AVVKKMGG+KGLFK GD+TKNVN TQM KLNQQ+AKM+DP
Sbjct: 409 GAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQIAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|386697209|gb|AFJ22065.1| signal recognition particle protein 54k, partial [Lardoglyphus sp.
AD983]
Length = 464
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 159/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQT RI RVA+
Sbjct: 342 LNMIPGFGAELSKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQTTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697505|gb|AFJ22213.1| signal recognition particle protein 54k, partial [Dermatophagoides
pteronyssinus]
gi|386697507|gb|AFJ22214.1| signal recognition particle protein 54k, partial [Dermatophagoides
evansi]
Length = 464
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697495|gb|AFJ22208.1| signal recognition particle protein 54k, partial [Euroglyphus
maynei]
Length = 464
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697509|gb|AFJ22215.1| signal recognition particle protein 54k, partial [Onychalges sp. 2
PBK-2011]
Length = 464
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697511|gb|AFJ22216.1| signal recognition particle protein 54k, partial [Onychalges sp. 1
PBK-2011]
Length = 464
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697229|gb|AFJ22075.1| signal recognition particle protein 54k, partial [Boletoglyphus
extremiorientalis]
gi|386697231|gb|AFJ22076.1| signal recognition particle protein 54k, partial [Boletoglyphus
ornatus]
Length = 444
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697227|gb|AFJ22074.1| signal recognition particle protein 54k, partial [Capillaroglyphus
polypori]
Length = 444
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697571|gb|AFJ22246.1| signal recognition particle protein 54k, partial [Vingrassia
velata]
Length = 464
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697537|gb|AFJ22229.1| signal recognition particle protein 54k, partial [Calcealges sp. n.
AD770]
Length = 464
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 159/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN +QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPSQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697665|gb|AFJ22293.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
B PBK-2011]
Length = 464
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPARIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN TQM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNPTQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697305|gb|AFJ22113.1| signal recognition particle protein 54k, partial [Aniacarus
mexicanus]
Length = 464
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCTSEHESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLSKNVNSVQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697125|gb|AFJ22023.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD357]
Length = 444
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697409|gb|AFJ22165.1| signal recognition particle protein 54k, partial [Laminosioptidae
gen. sp. AD884]
Length = 464
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|125980516|ref|XP_001354282.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|195167799|ref|XP_002024720.1| GL22620 [Drosophila persimilis]
gi|54642588|gb|EAL31335.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|194108125|gb|EDW30168.1| GL22620 [Drosophila persimilis]
Length = 508
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 164/187 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD NEEL+EKIKHG FT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG E ESMAR+KR+MT+MDSM+D ELDNRDGAKLF KQ R TRVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEAESMARIKRMMTMMDSMSDNELDNRDGAKLFIKQPTRCTRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+E K+LI+ YTKFAAVVKKMGG+KGLFK GD+TKNVN TQM KLNQQMAKM+DP
Sbjct: 409 GAGVLEREAKELIAHYTKFAAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|386697497|gb|AFJ22209.1| signal recognition particle protein 54k, partial [Hirstia
chelidonis]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697303|gb|AFJ22112.1| signal recognition particle protein 54k, partial [Chelomatolichus
sp. AD1166]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697491|gb|AFJ22206.1| signal recognition particle protein 54k, partial [Gymnoglyphus
longior]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697399|gb|AFJ22160.1| signal recognition particle protein 54k, partial [Tinamoglyphus sp.
AD1186]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMHRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+ KNVN +QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLAKNVNASQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697657|gb|AFJ22289.1| signal recognition particle protein 54k, partial [Toxerodectes sp.
A PBK-2011]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN TQM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNPTQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697493|gb|AFJ22207.1| signal recognition particle protein 54k, partial [Gymnoglyphus osu]
Length = 460
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 398 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697667|gb|AFJ22294.1| signal recognition particle protein 54k, partial [Prolistrophorus
sp. n. AD725]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697439|gb|AFJ22180.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD766]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQQMA+M+DP
Sbjct: 402 GAGVAQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697435|gb|AFJ22178.1| signal recognition particle protein 54k, partial [Analges spiniger]
Length = 464
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQQMA+M+DP
Sbjct: 402 GAGVAQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697163|gb|AFJ22042.1| signal recognition particle protein 54k, partial [Roubikia sp.
AD863]
Length = 453
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 271 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 330
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 331 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 390
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 391 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 450
Query: 196 RVL 198
RVL
Sbjct: 451 RVL 453
>gi|386697633|gb|AFJ22277.1| signal recognition particle protein 54k, partial [Alaudicola
bureschi]
Length = 464
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN QM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697663|gb|AFJ22292.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
2B PBK-2011]
Length = 464
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN TQM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNPTQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697445|gb|AFJ22183.1| signal recognition particle protein 54k, partial [Temnalges sp.
AD903]
Length = 464
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697677|gb|AFJ22299.1| signal recognition particle protein 54k, partial [Listrophorus
squamiferus]
Length = 464
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697695|gb|AFJ22308.1| signal recognition particle protein 54k, partial [Olabidocarpus sp.
AD416]
Length = 464
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697649|gb|AFJ22285.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
B PBK-2011]
Length = 464
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN TQM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNPTQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697647|gb|AFJ22284.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
AD1213]
Length = 464
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN TQM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNPTQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697503|gb|AFJ22212.1| signal recognition particle protein 54k, partial [Dermatophagoides
sp. n. AD1210]
Length = 464
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697483|gb|AFJ22202.1| signal recognition particle protein 54k, partial [Congocoptes
sphyrapicicola]
Length = 464
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697447|gb|AFJ22184.1| signal recognition particle protein 54k, partial [Hyomesalges sp.
AD1028]
Length = 460
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 398 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697261|gb|AFJ22091.1| signal recognition particle protein 54k, partial [Kramerella oti]
Length = 464
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 159/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697567|gb|AFJ22244.1| signal recognition particle protein 54k, partial [Ingrassia
philomachi]
Length = 444
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697217|gb|AFJ22069.1| signal recognition particle protein 54k, partial [Cosmoglyphus sp.
AD702]
Length = 444
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMA+M+DP
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMARMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697455|gb|AFJ22188.1| signal recognition particle protein 54k, partial [Picalgoides aff.
pteroglossorum AD1152]
Length = 464
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697425|gb|AFJ22173.1| signal recognition particle protein 54k, partial [Analges sp.
AD1022]
Length = 460
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 338 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQQMA+M+DP
Sbjct: 398 GAGVAQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQQMARMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697513|gb|AFJ22217.1| signal recognition particle protein 54k, partial [Microlichus sp.
AD759]
gi|386697515|gb|AFJ22218.1| signal recognition particle protein 54k, partial [Epidermoptidae
sp. B]
Length = 464
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDFTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|195014137|ref|XP_001983965.1| GH16182 [Drosophila grimshawi]
gi|193897447|gb|EDV96313.1| GH16182 [Drosophila grimshawi]
Length = 508
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 147/187 (78%), Positives = 164/187 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD +EEL+EKIKHG FT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGSEELMEKIKHGHFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVA
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCLRVAH 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK++I+ YTKFAAVVKKMGG+KGLFK GDI KNVN TQM KLNQQMAKM+DP
Sbjct: 409 GAGVIEREVKEMIAHYTKFAAVVKKMGGVKGLFKQGDIAKNVNPTQMAKLNQQMAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|386697687|gb|AFJ22304.1| signal recognition particle protein 54k, partial [Myocoptes
japonensis]
Length = 464
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|20151307|gb|AAM11013.1| AT23778p [Drosophila melanogaster]
Length = 569
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 165/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD N+EL+EKIKHG FT+RDMYEQFQNIMKMGPFSQ
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQF 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKF+AVVKKMGG+KGLFK GD+TKNVN TQM KLNQQ+AKM+DP
Sbjct: 409 GAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQIAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|386697449|gb|AFJ22185.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD787]
Length = 464
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697281|gb|AFJ22101.1| signal recognition particle protein 54k, partial [Hyperaspidacarus
sp. AD1206]
Length = 464
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV +L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVHELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697247|gb|AFJ22084.1| signal recognition particle protein 54k, partial [Cerophagus
nearcticus]
Length = 464
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLK++MTIMDSM D ELD+RDGAKLFSKQ R+ R+A+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKKMMTIMDSMADSELDSRDGAKLFSKQPTRVVRIAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQ MA+M+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQHMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697265|gb|AFJ22093.1| signal recognition particle protein 54k, partial [Dermonoton sp.
AD1250]
Length = 464
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697569|gb|AFJ22245.1| signal recognition particle protein 54k, partial [Ingrassia sp.
AD1008]
Length = 464
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM +LNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMARLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697301|gb|AFJ22111.1| signal recognition particle protein 54k, partial [Scolaralichus sp.
AD1165]
Length = 464
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697245|gb|AFJ22083.1| signal recognition particle protein 54k, partial [Sennertionyx
manicati]
Length = 464
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLK++MTIMDSM+D ELD+RDGAKLFSKQ R+ R+A+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKKMMTIMDSMSDSELDSRDGAKLFSKQPTRVVRIAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQ MA+M DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQHMARMXDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697263|gb|AFJ22092.1| signal recognition particle protein 54k, partial [Kramerella sp.
AD967]
Length = 444
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 159/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697239|gb|AFJ22080.1| signal recognition particle protein 54k, partial [Askinasia
antillarum]
Length = 446
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 264 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 323
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI R+A+
Sbjct: 324 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRIAR 383
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMA+M+DP
Sbjct: 384 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMARMIDP 443
Query: 196 RVL 198
RVL
Sbjct: 444 RVL 446
>gi|386697291|gb|AFJ22106.1| signal recognition particle protein 54k, partial [Geranolichus
canadensis]
Length = 444
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE+ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 322 LNMIPGFGADLAKCASEEESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLAKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697669|gb|AFJ22295.1| signal recognition particle protein 54k, partial [Afrolistrophorus
sp. n. AD730]
Length = 464
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697653|gb|AFJ22287.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1138]
gi|386697655|gb|AFJ22288.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1236]
Length = 464
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN TQM+KLN QMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNPTQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697407|gb|AFJ22164.1| signal recognition particle protein 54k, partial [Calamicoptes sp.
AD1253]
Length = 464
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697415|gb|AFJ22168.1| signal recognition particle protein 54k, partial [Megninia
ginglymura]
Length = 464
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV+DL++QYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQDLLNQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697177|gb|AFJ22049.1| signal recognition particle protein 54k, partial [Canestrinia sp.
n. AD775]
Length = 464
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMA+M+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|17647949|ref|NP_523931.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|5679038|gb|AAD46831.1|AF160891_1 BcDNA.GM09489 [Drosophila melanogaster]
gi|7295492|gb|AAF50806.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|220952956|gb|ACL89021.1| Srp54k-PA [synthetic construct]
Length = 508
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 165/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD N+EL+EKIKHG FT+RDMYEQFQNIMKMGPFSQ
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQF 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKF+AVVKKMGG+KGLFK GD+TKNVN TQM KLNQQ+AKM+DP
Sbjct: 409 GAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQIAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|386697609|gb|AFJ22265.1| signal recognition particle protein 54k, partial [Monojoubertia
microphylla]
Length = 464
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697307|gb|AFJ22114.1| signal recognition particle protein 54k, partial [Aniibius
drepanophorus]
Length = 464
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGADLAKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697535|gb|AFJ22228.1| signal recognition particle protein 54k, partial [Steatacarus
bifiditibia]
Length = 464
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPTQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697659|gb|AFJ22290.1| signal recognition particle protein 54k, partial [Allodectes sp. A
PBK-2011]
gi|386697661|gb|AFJ22291.1| signal recognition particle protein 54k, partial [Allodectes sp.
AD1170]
Length = 464
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN TQM+KLN QMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNPTQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697165|gb|AFJ22043.1| signal recognition particle protein 54k, partial [Achaetodactylus
leleupi]
Length = 464
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELSKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697369|gb|AFJ22145.1| signal recognition particle protein 54k, partial [Neopteronyssus
pici]
Length = 464
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+DGELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLNQQMA+M+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPTQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697671|gb|AFJ22296.1| signal recognition particle protein 54k, partial [Afrolistrophorus
congoicola]
Length = 464
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697283|gb|AFJ22102.1| signal recognition particle protein 54k, partial [Falculiferidae
sp. AD1207]
Length = 464
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697555|gb|AFJ22238.1| signal recognition particle protein 54k, partial [Alloptes
obtusolobus]
Length = 464
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLF+KQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDPELDSREGAKLFTKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697465|gb|AFJ22193.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD637]
Length = 464
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697457|gb|AFJ22189.1| signal recognition particle protein 54k, partial [Picalgoides sp.
AD1159]
Length = 464
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697469|gb|AFJ22195.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD867]
Length = 464
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697689|gb|AFJ22305.1| signal recognition particle protein 54k, partial [Alabidocarpus
intercalatus]
Length = 464
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLNQQM+KM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLSKNVNPAQMAKLNQQMSKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697475|gb|AFJ22198.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. AD733]
gi|386697477|gb|AFJ22199.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. D AD1162]
Length = 464
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697405|gb|AFJ22163.1| signal recognition particle protein 54k, partial [Rallicoptes aff.
gallinulae AD992]
Length = 460
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 398 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697467|gb|AFJ22194.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD871]
Length = 464
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697693|gb|AFJ22307.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
E nr. subvirgulatus AD1267]
Length = 464
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT+ EV+ L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQNEVQKLLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
R+L
Sbjct: 462 RIL 464
>gi|386697199|gb|AFJ22060.1| signal recognition particle protein 54k, partial [Glycyphagus
hypudaei complex sp. PBK-2011]
Length = 444
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/183 (75%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+DGELD+R+GAKLFSKQ RI RV +
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDGELDSREGAKLFSKQPTRIVRVGR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK G+ TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKPGEFTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697401|gb|AFJ22161.1| signal recognition particle protein 54k, partial [Neumannia sp.
AD1196]
Length = 444
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMHRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN +QM KLNQQMAKM+DP
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNASQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697403|gb|AFJ22162.1| signal recognition particle protein 54k, partial [Dermoglyphus sp.
n. AD780]
Length = 464
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697335|gb|AFJ22128.1| signal recognition particle protein 54k, partial [Hieracolichus
nisi]
Length = 444
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697517|gb|AFJ22219.1| signal recognition particle protein 54k, partial [Myialges sp.
AD1127]
Length = 464
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + S+ ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASQAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+ KNVN +QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLAKNVNPSQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697459|gb|AFJ22190.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD747]
Length = 444
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697479|gb|AFJ22200.1| signal recognition particle protein 54k, partial [Paralgopsis sp.
AD1163]
Length = 444
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697519|gb|AFJ22220.1| signal recognition particle protein 54k, partial [Promyialges sp.
AD1177]
Length = 464
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697561|gb|AFJ22241.1| signal recognition particle protein 54k, partial [Ingrassiella sp.
AD765]
Length = 464
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE+LIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLTKNVNSAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697173|gb|AFJ22047.1| signal recognition particle protein 54k, partial [Afrocanestrinia
sp. n. AD456]
Length = 464
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+G+KLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGSKLFSKQPTRIMRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMA+M+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|195337623|ref|XP_002035428.1| GM14699 [Drosophila sechellia]
gi|194128521|gb|EDW50564.1| GM14699 [Drosophila sechellia]
Length = 508
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 165/187 (88%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+DKVNELKLD N+EL+EKIKHG FT+RDMYEQFQNIMKMGPFSQ
Sbjct: 289 PFVSKLLGMGDIEGLLDKVNELKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQF 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKF+AVVKKMGG+KGLFK GD+TKNVN TQM KLNQQ+AKM+DP
Sbjct: 409 GAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQQIAKMIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|386697397|gb|AFJ22159.1| signal recognition particle protein 54k, partial [Caenolestocoptes
inca]
Length = 464
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++E+++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREIQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|443709552|gb|ELU04185.1| hypothetical protein CAPTEDRAFT_160274 [Capitella teleta]
Length = 505
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 163/189 (86%), Gaps = 3/189 (1%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEEL++K++HGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVSKLLGMGDIEGLIDKVNELKLEDNEELMKKLRHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPG DF++KG+EQESMARLK+LMTIMDSMND ELD+ +GAKLF +Q GR+ RVA+
Sbjct: 349 MSMIPGLGNDFMTKGNEQESMARLKKLMTIMDSMNDSELDSHEGAKLF-RQKGRVQRVAR 407
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK--GGDITKNVNQTQMMKLNQQMAKMM 193
GAGV+ EV++L+ QYTKFA +VKKMGGIKGLFK GGD+ KNVN TQM KLNQ +A+MM
Sbjct: 408 GAGVSCNEVEELLKQYTKFAQMVKKMGGIKGLFKGSGGDMAKNVNPTQMAKLNQNIARMM 467
Query: 194 DPRVLHQMG 202
DPRVL QMG
Sbjct: 468 DPRVLQQMG 476
>gi|386697683|gb|AFJ22302.1| signal recognition particle protein 54k, partial [Trichoecius sp.
n. AD367]
Length = 464
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLMKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697501|gb|AFJ22211.1| signal recognition particle protein 54k, partial [Dermatophagoides
farinae]
Length = 464
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697585|gb|AFJ22253.1| signal recognition particle protein 54k, partial [Proctophyllodes
aff. detruncatus AD715]
Length = 464
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV +L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVHELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697431|gb|AFJ22176.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD543]
Length = 464
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLF KQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFFKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQQMA+M+DP
Sbjct: 402 GAGVAQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697471|gb|AFJ22196.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD938]
gi|386697473|gb|AFJ22197.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD1042]
Length = 460
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAK+FSKQ R+ RVA+
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKIFSKQPTRLVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 398 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697559|gb|AFJ22240.1| signal recognition particle protein 54k, partial [Alloptes
calidridis]
Length = 464
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMXRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697371|gb|AFJ22146.1| signal recognition particle protein 54k, partial [Pteronyssoides
piscinotus]
Length = 464
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLINIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLF+KQ RI+RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSELDAREGAKLFTKQPTRISRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN +QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPSQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697327|gb|AFJ22124.1| signal recognition particle protein 54k, partial [Capitolichus sp.
AD1240]
Length = 464
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697343|gb|AFJ22132.1| signal recognition particle protein 54k, partial [Fringillosphaera
sp. AD781]
Length = 464
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLF KQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRIMTIMDSMSDSELDSREGAKLFCKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697279|gb|AFJ22100.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD994]
Length = 460
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R RVA+
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRTVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLNQQMAKM+DP
Sbjct: 398 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLSKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697365|gb|AFJ22143.1| signal recognition particle protein 54k, partial [Pteronyssus aff.
centurus AD634]
Length = 464
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+DGELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697679|gb|AFJ22300.1| signal recognition particle protein 54k, partial [Metalistrophorus
pagenstecheri]
Length = 464
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAK++DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKVIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697339|gb|AFJ22130.1| signal recognition particle protein 54k, partial [Cystoidosoma sp.
AD1160]
gi|386697341|gb|AFJ22131.1| signal recognition particle protein 54k, partial [Ascouracarus sp.
AD1241]
Length = 464
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVTELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697617|gb|AFJ22269.1| signal recognition particle protein 54k, partial [Proctophyllodinae
gen. sp. AD1237]
gi|386697627|gb|AFJ22274.1| signal recognition particle protein 54k, partial [Anisophyllodes
sp. AD1233]
gi|386697629|gb|AFJ22275.1| signal recognition particle protein 54k, partial [aff.
Anisophyllodes sp. AD1179]
Length = 464
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697361|gb|AFJ22141.1| signal recognition particle protein 54k, partial [Parapteronyssus
picoides]
Length = 460
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+DGELD R+GAKLFSKQ RI RVA+
Sbjct: 338 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 398 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMARMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697345|gb|AFJ22133.1| signal recognition particle protein 54k, partial [Apionacaridae
gen. sp. AD1423]
Length = 464
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLF KQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFCKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697581|gb|AFJ22251.1| signal recognition particle protein 54k, partial [Proctophyllodes
scolopacinus]
gi|386697589|gb|AFJ22255.1| signal recognition particle protein 54k, partial [Joubertophyllodes
modularis]
gi|386697591|gb|AFJ22256.1| signal recognition particle protein 54k, partial [Joubertophyllodes
proximus]
gi|386697593|gb|AFJ22257.1| signal recognition particle protein 54k, partial [Joubertophyllodes
ampulaceus]
gi|386697595|gb|AFJ22258.1| signal recognition particle protein 54k, partial [Proctophyllodes
clavatus]
gi|386697597|gb|AFJ22259.1| signal recognition particle protein 54k, partial [Proctophyllodes
spini]
gi|386697619|gb|AFJ22270.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1194]
gi|386697621|gb|AFJ22271.1| signal recognition particle protein 54k, partial [Proctophyllodinae
sp. AD1212]
gi|386697623|gb|AFJ22272.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1243]
gi|386697625|gb|AFJ22273.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1176]
Length = 464
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697325|gb|AFJ22123.1| signal recognition particle protein 54k, partial [Gabucinia sp. B
PBK-2011]
Length = 464
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697487|gb|AFJ22204.1| signal recognition particle protein 54k, partial [Otodectes
cynotis]
Length = 444
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEKIKHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKIKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAG T++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 382 GAGCTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697333|gb|AFJ22127.1| signal recognition particle protein 54k, partial [Piciformobia sp.
AD1182]
Length = 464
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVN LKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDKVNALKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697463|gb|AFJ22192.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD773]
Length = 464
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLF+KQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFTKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLNQQMAKM+DP
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLNKNVNPTQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697295|gb|AFJ22108.1| signal recognition particle protein 54k, partial [Grallobia
fulicae]
Length = 464
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEEL+EK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697363|gb|AFJ22142.1| signal recognition particle protein 54k, partial [Pteronyssus
sphyrapicinus]
Length = 460
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+DGELD R+GAKLFSKQ RI RVA+
Sbjct: 338 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIIRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 398 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMARMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697191|gb|AFJ22056.1| signal recognition particle protein 54k, partial [Nycteriglyphites
pennsylvanicus]
Length = 444
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MT+MDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCASEAESMSRLKRMMTVMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT +EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTTREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
R+L
Sbjct: 442 RIL 444
>gi|386697691|gb|AFJ22306.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
F nr. subvirgulatus AD1262]
Length = 464
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT+ EV+ L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQNEVQKLLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
R+L
Sbjct: 462 RIL 464
>gi|386697207|gb|AFJ22064.1| signal recognition particle protein 54k, partial [Acaridae gen. n.
sp. n. AD469]
Length = 463
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 281 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 340
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 341 LNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 400
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV+DL+SQYTKFA VVKKMGGIKGLFK GD+ KNVN QM +LNQQMA+M+DP
Sbjct: 401 GSGVTQREVQDLLSQYTKFAQVVKKMGGIKGLFKSGDLAKNVNPAQMARLNQQMARMIDP 460
Query: 196 RVL 198
RVL
Sbjct: 461 RVL 463
>gi|386697179|gb|AFJ22050.1| signal recognition particle protein 54k, partial [Arrunsithiana nr.
spicantis AD764]
Length = 464
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI R+++
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRISR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697241|gb|AFJ22081.1| signal recognition particle protein 54k, partial [Ewingia
coenobitae]
Length = 444
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLANIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI R+A+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRIAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMA+M+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMARMIDP 441
Query: 196 RVL 198
VL
Sbjct: 442 XVL 444
>gi|386697383|gb|AFJ22152.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 464
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697193|gb|AFJ22057.1| signal recognition particle protein 54k, partial [Oryzomyopus sp.
AD729]
Length = 444
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI R+++
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIIRISR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMA+M+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMARMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697389|gb|AFJ22155.1| signal recognition particle protein 54k, partial [Ptyssalgidae gen.
n. sp. AD1153]
Length = 464
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697277|gb|AFJ22099.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD1244]
Length = 444
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRXMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLSKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697573|gb|AFJ22247.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1199]
Length = 464
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLI+KVNELKLDDNE+LIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLINKVNELKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIKRVAN 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLTKNVNSAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697557|gb|AFJ22239.1| signal recognition particle protein 54k, partial [Alloptes
crassipes]
Length = 459
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 155/182 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDPELDSREGAKLFSKQPTRMVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT +EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 398 GAGVTHREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RV 197
RV
Sbjct: 458 RV 459
>gi|386697441|gb|AFJ22181.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD869]
Length = 464
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEEL+EK+KHG+FT+RDMYEQ NIMKMGPF+Q+
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELMEKLKHGEFTIRDMYEQLTNIMKMGPFNQL 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697451|gb|AFJ22186.1| signal recognition particle protein 54k, partial [Picalgoides
picimajoris]
Length = 464
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVTELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+G T++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGATQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697443|gb|AFJ22182.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD840]
Length = 464
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEEL+EK+KHG+FT+RDMYEQ NIMKMGPF+Q+
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELMEKLKHGEFTIRDMYEQLTNIMKMGPFNQL 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697323|gb|AFJ22122.1| signal recognition particle protein 54k, partial [Gabucinia
delibata]
Length = 444
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLAKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697379|gb|AFJ22150.1| signal recognition particle protein 54k, partial [Scutulanyssus
hirundicola]
Length = 464
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697427|gb|AFJ22174.1| signal recognition particle protein 54k, partial [Anhemialges sp.
AD813]
Length = 460
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 338 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV +L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 398 GAGVAQREVLELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697575|gb|AFJ22248.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1204]
Length = 464
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLI+KVNELKLDDNE+LIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLINKVNELKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIKRVAY 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLTKNVNSAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|340371045|ref|XP_003384056.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Amphimedon queenslandica]
Length = 501
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 164/187 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GL+DKV+EL LD+NEEL++K++HG+FTLRDMYEQFQNIMKMGPF+QI
Sbjct: 289 PFISKLLGMGDIQGLVDKVSELGLDENEELVKKLQHGEFTLRDMYEQFQNIMKMGPFNQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGF DF+SKG+E+ESMARLK+LMTIMDSM+DGELD+ +GAKLF +Q GR RVA+
Sbjct: 349 MGMIPGFPADFMSKGNERESMARLKKLMTIMDSMSDGELDHPNGAKLFQQQPGRYERVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+G + K+VKDL++QY+KF+ +VKKMGGIKGLFK GDI +NVN QM K+NQQMA+M+DP
Sbjct: 409 GSGTSVKDVKDLMTQYSKFSQMVKKMGGIKGLFKSGDIGRNVNPNQMAKINQQMARMIDP 468
Query: 196 RVLHQMG 202
RVL QMG
Sbjct: 469 RVLQQMG 475
>gi|386697377|gb|AFJ22149.1| signal recognition particle protein 54k, partial [Scutulanyssus
subis]
Length = 464
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697577|gb|AFJ22249.1| signal recognition particle protein 54k, partial [Proctophyllodes
dolephyes]
Length = 444
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAK+FSKQ R+ RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKIFSKQPTRLVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN QMAKM+DP
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNHQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697273|gb|AFJ22097.1| signal recognition particle protein 54k, partial [Freyana
lophodytes]
Length = 464
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN ELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLK++MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697297|gb|AFJ22109.1| signal recognition particle protein 54k, partial [Grallolichus sp.
AD907]
Length = 464
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN ELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLNQQMAKM+DP
Sbjct: 402 GSGVAQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPTQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697329|gb|AFJ22125.1| signal recognition particle protein 54k, partial [Capitolichus sp.
C PBK-2011]
gi|386697331|gb|AFJ22126.1| signal recognition particle protein 54k, partial [Capitolichus sp.
A PBK-2011]
Length = 464
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697359|gb|AFJ22140.1| signal recognition particle protein 54k, partial [Ramphastobius sp.
A PBK-2011]
Length = 464
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV ELKLDDNEELI K+KHGQFT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVTELKLDDNEELIGKLKHGQFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+DGELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAQMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697543|gb|AFJ22232.1| signal recognition particle protein 54k, partial [Trouessartia
kratochvili]
gi|386697545|gb|AFJ22233.1| signal recognition particle protein 54k, partial [Trouessartia
reguli]
Length = 464
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFK GD+ KNVN QM +LNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLNQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMARLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697613|gb|AFJ22267.1| signal recognition particle protein 54k, partial [Platyacarus sp.
AD1238]
Length = 464
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN QMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697349|gb|AFJ22135.1| signal recognition particle protein 54k, partial [Bdellorhynchus
polymorphus]
gi|386697355|gb|AFJ22138.1| signal recognition particle protein 54k, partial [Zygochelifer cf.
ogarinus PBK-2011]
Length = 464
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ M+PGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMLPGFGAELAKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQY+KF+AVVKKMGGIKGLFK GD+TKNVN QM +LNQQMAKMMDP
Sbjct: 402 GAGVTQREVQELLSQYSKFSAVVKKMGGIKGLFKTGDLTKNVNSNQMAQLNQQMAKMMDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697271|gb|AFJ22096.1| signal recognition particle protein 54k, partial [Freyana
largifolia]
Length = 464
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLK +MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKCMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697601|gb|AFJ22261.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD681]
gi|386697603|gb|AFJ22262.1| signal recognition particle protein 54k, partial [Proctophyllodes
stylifer]
gi|386697605|gb|AFJ22263.1| signal recognition particle protein 54k, partial [Proctophyllodes
reguli]
gi|386697607|gb|AFJ22264.1| signal recognition particle protein 54k, partial [Proctophyllodes
hipposideros]
Length = 464
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMSKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697539|gb|AFJ22230.1| signal recognition particle protein 54k, partial [Trouessartia
rubecula]
Length = 464
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFK GD+ KNVN QM +LNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLNQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPVQMARLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697635|gb|AFJ22278.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1046]
Length = 464
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAK FSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKFFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVK+MGGIKGLFK GDI KNVN QM KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKRMGGIKGLFKTGDIGKNVNPAQMQKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697637|gb|AFJ22279.1| signal recognition particle protein 54k, partial [Amerodectes sp.
1B PBK-2011]
Length = 464
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVK+MGGIKGLFK GDI KNVN QM KLN QMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKRMGGIKGLFKTGDIGKNVNPAQMQKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697651|gb|AFJ22286.1| signal recognition particle protein 54k, partial [Amerodectes aff.
ocelatus AD1139]
Length = 463
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 133/182 (73%), Positives = 156/182 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RV 197
RV
Sbjct: 462 RV 463
>gi|386697541|gb|AFJ22231.1| signal recognition particle protein 54k, partial [Trouessartia sp.
AD952]
gi|386697549|gb|AFJ22235.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD694]
gi|386697551|gb|AFJ22236.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD642]
Length = 464
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFK GD+ KNVN QM +LNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLNQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMARLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697255|gb|AFJ22088.1| signal recognition particle protein 54k, partial [Hypodectes sp.
AD946]
Length = 459
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/174 (77%), Positives = 154/174 (88%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDIEGLIDKVNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI+ MIPGF
Sbjct: 286 MGDIEGLIDKVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFG 345
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+GAGV +KE
Sbjct: 346 AELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVMQKE 405
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRV 197
V++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DPRV
Sbjct: 406 VQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDPRV 459
>gi|386697351|gb|AFJ22136.1| signal recognition particle protein 54k, partial [Bdellorhynchus
oxyurae]
Length = 460
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 158/183 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ M+PGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 338 LNMLPGFGAELAKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQY+KF+AVVKKMGGIKGLFK GD+TKNVN QM +LNQQMAKMMDP
Sbjct: 398 GAGVTQREVQELLSQYSKFSAVVKKMGGIKGLFKTGDLTKNVNSNQMAQLNQQMAKMMDP 457
Query: 196 RVL 198
RVL
Sbjct: 458 RVL 460
>gi|386697547|gb|AFJ22234.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD768]
Length = 444
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFK GD+ KNVN QM +LNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLNQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMARLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697299|gb|AFJ22110.1| signal recognition particle protein 54k, partial [Kakapolichus sp.
n. AD881]
Length = 444
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMIRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT +EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTGREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697641|gb|AFJ22281.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1195]
Length = 464
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYE NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYETLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVK+MGGIKGLFK GDI KNVN QM KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKRMGGIKGLFKTGDIGKNVNPAQMQKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697253|gb|AFJ22087.1| signal recognition particle protein 54k, partial [Alcedinectes
alcyon]
Length = 458
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/181 (74%), Positives = 155/181 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 398 GAGVMQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 R 196
R
Sbjct: 458 R 458
>gi|386697385|gb|AFJ22153.1| signal recognition particle protein 54k, partial [Ptyssalges sp.
AD1171]
gi|386697387|gb|AFJ22154.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 463
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 154/182 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RV 197
RV
Sbjct: 462 RV 463
>gi|386697189|gb|AFJ22055.1| signal recognition particle protein 54k, partial [Aeroglyphus
robustus]
Length = 444
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPG + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGIGAELSKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
R+L
Sbjct: 442 RIL 444
>gi|386697317|gb|AFJ22119.1| signal recognition particle protein 54k, partial [Leptosyringobia
longitarsa]
Length = 464
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMLRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697381|gb|AFJ22151.1| signal recognition particle protein 54k, partial [Ptyssalges sp. n.
1 AD1157]
Length = 463
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 154/182 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RV 197
RV
Sbjct: 462 RV 463
>gi|386697203|gb|AFJ22062.1| signal recognition particle protein 54k, partial [Horstia sp.
AD1229]
Length = 464
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+G KLFSKQ RI R+A+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGTKLFSKQPTRIVRIAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697205|gb|AFJ22063.1| signal recognition particle protein 54k, partial [Horstia glabra]
Length = 444
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+G KLFSKQ RI R+A+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGTKLFSKQPTRIVRIAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMARMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697639|gb|AFJ22280.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD680]
Length = 464
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFAAVVK+MGGIKGLFK GDI KNVN QM KLN QMAKM+DP
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKRMGGIKGLFKTGDIGKNVNPAQMQKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697213|gb|AFJ22067.1| signal recognition particle protein 54k, partial [Acarus siro]
gi|386697215|gb|AFJ22068.1| signal recognition particle protein 54k, partial [Acarus immobilis]
Length = 444
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 154/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV +EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMA+M+DP
Sbjct: 382 GAGVMTREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNPAQMAKLNQQMARMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697615|gb|AFJ22268.1| signal recognition particle protein 54k, partial [Platyacarus sp.
n. AD1155]
Length = 463
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 156/182 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN QMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNHQMAKMIDP 461
Query: 196 RV 197
RV
Sbjct: 462 RV 463
>gi|386697275|gb|AFJ22098.1| signal recognition particle protein 54k, partial [Freyana sp.
AD1003]
Length = 464
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN ELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLK++MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697395|gb|AFJ22158.1| signal recognition particle protein 54k, partial [Strelkoviacarus
sp. AD771]
Length = 464
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+D EEL+EK+KHG FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDTEELLEKLKHGDFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESMARLKR+MTIMDS++D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMARLKRMMTIMDSLSDSELDSREGAKLFSKQPSRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD++KNVN TQM KLNQQMAKM+DP
Sbjct: 402 GAGVPQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLSKNVNPTQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RV
Sbjct: 462 RVF 464
>gi|386697357|gb|AFJ22139.1| signal recognition particle protein 54k, partial [Mouchetia nr.
indochinensis AD1135]
Length = 464
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 154/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAK FSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSELDAREGAKXFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697269|gb|AFJ22095.1| signal recognition particle protein 54k, partial [Freyana sp. n.
AD630]
Length = 464
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN ELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLK++MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697353|gb|AFJ22137.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD982]
Length = 463
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/182 (73%), Positives = 157/182 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ M+PGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMLPGFGAELAKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQY+KF+AVVKKMGGIKGLFK GD+TKNVN QM +LNQQMAKMMDP
Sbjct: 402 GAGVTQREVQELLSQYSKFSAVVKKMGGIKGLFKTGDLTKNVNSNQMAQLNQQMAKMMDP 461
Query: 196 RV 197
RV
Sbjct: 462 RV 463
>gi|386697161|gb|AFJ22041.1| signal recognition particle protein 54k, partial [Fusohericia sp.
AD660]
Length = 445
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 263 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 322
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 323 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDPELDSREGAKLFSKQATRIVRVAR 382
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQYTKFA VVKKMGGIKGLFK GD+ KNVN QM KLNQ MAKM+DP
Sbjct: 383 GAGVTQREVQELLSQYTKFATVVKKMGGIKGLFKSGDLAKNVNPNQMAKLNQHMAKMIDP 442
Query: 196 RVL 198
RVL
Sbjct: 443 RVL 445
>gi|386697311|gb|AFJ22116.1| signal recognition particle protein 54k, partial [Ptiloxenus sp.
AD1257]
Length = 464
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPNRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EVK+L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVKELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
VL
Sbjct: 462 MVL 464
>gi|386697373|gb|AFJ22147.1| signal recognition particle protein 54k, partial [Sturnotrogus
truncatus]
Length = 464
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 154/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI R A+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRXAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697419|gb|AFJ22170.1| signal recognition particle protein 54k, partial [Micralges sp. B
PBK-2011]
Length = 464
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 154/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIAKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV +L+SQYTKF+AVVKKMGGIKGLFK GD+ KNVN QM KLN QMA+M+DP
Sbjct: 402 GSGVTQREVHELLSQYTKFSAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNNQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697423|gb|AFJ22172.1| signal recognition particle protein 54k, partial [Diplaegidia
columbae]
Length = 444
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEDNEELIAKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKF+AVVKKMGGIKGLFK GD+ KNVN QM KLN QMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFSAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNNQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697287|gb|AFJ22104.1| signal recognition particle protein 54k, partial [Mesosathes sp.
AD1187]
Length = 464
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIM+SM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMESMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVMQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RV
Sbjct: 462 RVF 464
>gi|195587932|ref|XP_002083715.1| GD13881 [Drosophila simulans]
gi|194195724|gb|EDX09300.1| GD13881 [Drosophila simulans]
Length = 508
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 163/187 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+DKVNELKLD N+EL+EKIKHG FT+RDMYEQFQNIMKMGPFSQ
Sbjct: 289 PFVSKLLGMGDIEGLLDKVNELKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQF 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGFSQDF++KG EQESMAR+KR+MT+MDSM+D ELDNRDGAKLFSKQ R RVAQ
Sbjct: 349 MNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQ 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E+EVK+LI+ YTKF+AVVKKMGG+KGLFK GD+TKNVN TQM KLNQ +AK +DP
Sbjct: 409 GAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDMTKNVNPTQMAKLNQLIAKTIDP 468
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 469 RMLQQMG 475
>gi|386697319|gb|AFJ22120.1| signal recognition particle protein 54k, partial [Phyllochaeta
tenuiseta]
Length = 464
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLID+VNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDRVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR++TIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMLTIMDSMSDSELDSREGAKLFSKQQTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697185|gb|AFJ22053.1| signal recognition particle protein 54k, partial [Chortoglyphus
arcuatus]
Length = 464
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAK FSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADCELDSREGAKFFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFA VVKKMGGIKGLFK GD++KNVN QM +LNQQMA+M+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGDLSKNVNPAQMARLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697313|gb|AFJ22117.1| signal recognition particle protein 54k, partial [Plutarchusia
chelopus]
gi|386697315|gb|AFJ22118.1| signal recognition particle protein 54k, partial [Syringobiidae
gen. sp. AD850]
Length = 444
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLID+VNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIKGLIDRVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR++TIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMLTIMDSMSDSELDSREGAKLFSKQQTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697187|gb|AFJ22054.1| signal recognition particle protein 54k, partial [Chortoglyphus sp.
AD792]
Length = 444
Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAK FSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADCELDSREGAKFFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFA VVKKMGGIKGLFK GD++KNVN QM +LNQQMA+M+DP
Sbjct: 382 GSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGDLSKNVNPAQMARLNQQMARMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|390352988|ref|XP_780650.3| PREDICTED: signal recognition particle 54 kDa protein-like
[Strongylocentrotus purpuratus]
Length = 513
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/190 (70%), Positives = 161/190 (84%), Gaps = 3/190 (1%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+EL LDDNEELI K+KHG+FTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDKVSELNLDDNEELINKLKHGEFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPGFS DF++KG+EQESMARLK+LMT+MDSM D ELD+R+GAKLF + GR+ RVA+
Sbjct: 349 MGMIPGFSSDFMTKGNEQESMARLKKLMTMMDSMKDEELDSREGAKLFMRCPGRVQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK---GGDITKNVNQTQMMKLNQQMAKM 192
G+GV+ +EV++L+ QY KFA +VKKMGGIKGLFK GGD++KNVN QM K+NQ +A+
Sbjct: 409 GSGVSVREVQELLQQYQKFAQMVKKMGGIKGLFKGKSGGDMSKNVNPAQMAKINQSIARA 468
Query: 193 MDPRVLHQMG 202
MDPRVL Q+G
Sbjct: 469 MDPRVLQQLG 478
>gi|386697285|gb|AFJ22103.1| signal recognition particle protein 54k, partial [Herodialges sp.
AD945]
Length = 464
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 153/183 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM RLKR+MTIMDSM+D ELD+R+GAKLF KQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMFRLKRMMTIMDSMSDSELDSREGAKLFFKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFAAVVKKMGG KGLFK GD KNVN Q+ KLNQQMAKM+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGTKGLFKSGDFAKNVNPAQLAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697347|gb|AFJ22134.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD706]
Length = 464
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/183 (71%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ M+PGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMLPGFGAELAKCTTEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV++L+SQY+KF+A+VKKMGGIKGLFK GD+ KNVN QM +LNQQMA+M+DP
Sbjct: 402 GAGVTQREVQELLSQYSKFSAMVKKMGGIKGLFKSGDLAKNVNANQMAQLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697183|gb|AFJ22052.1| signal recognition particle protein 54k, partial [Chortoglyphus
sciuricola]
Length = 464
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 154/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+Q
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQF 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAK FSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADCELDSREGAKFFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV++L+SQYTKFA VVKKMGGIKGLFK GD++KNVN QM +LNQQMA+M+DP
Sbjct: 402 GSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGDLSKNVNPAQMARLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697393|gb|AFJ22157.1| signal recognition particle protein 54k, partial [Strelkoviacarus
aff. quadratus PBK-2011]
Length = 464
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/183 (71%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+D E+L+EK++HG FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDTEDLLEKLRHGDFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESMARLKR+MTIMDS++D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMARLKRMMTIMDSLSDSELDSREGAKLFSKQPSRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD++KNVN TQM KLNQQMAKM+DP
Sbjct: 402 GAGVPQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLSKNVNPTQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RV
Sbjct: 462 RVF 464
>gi|386697391|gb|AFJ22156.1| signal recognition particle protein 54k, partial [Strelkoviacarus
quadratus]
Length = 444
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/183 (71%), Positives = 155/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+D E+L+EK++HG FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEDTEDLLEKLRHGDFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESMARLKR+MTIMDS++D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMARLKRMMTIMDSLSDSELDSREGAKLFSKQPSRLVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD++KNVN TQM KLNQQMAKM+DP
Sbjct: 382 GAGVPQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLSKNVNPTQMAKLNQQMAKMIDP 441
Query: 196 RVL 198
RV
Sbjct: 442 RVF 444
>gi|386697429|gb|AFJ22175.1| signal recognition particle protein 54k, partial [Hemialges sp. n.
AD673]
Length = 464
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/183 (71%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGD+EGLIDKVNELKL+DN++LIEK+KHG+FT+RDMYEQ NI+KMGPF+QI
Sbjct: 282 PFISKLLGMGDLEGLIDKVNELKLEDNQDLIEKLKHGEFTIRDMYEQLTNIIKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D +E ESM RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGADLAKCATEAESMFRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRVVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT+++V++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN +QM KLNQQMAKM+DP
Sbjct: 402 GAGVTQRDVQELLSQYTKFAAVVKKMGGIKGLFKSGDLNKNVNPSQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697421|gb|AFJ22171.1| signal recognition particle protein 54k, partial [Diplaegidia sp. A
PBK-2011]
Length = 464
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 152/183 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIAKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GVT++EV +L+SQYTKF+ VVKKMGGIKGL K GD+ KNVN QM KLN QMAKM+DP
Sbjct: 402 GSGVTQREVHELLSQYTKFSGVVKKMGGIKGLXKSGDLAKNVNPAQMAKLNNQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|339239467|ref|XP_003381288.1| signal recognition protein [Trichinella spiralis]
gi|316975692|gb|EFV59096.1| signal recognition protein [Trichinella spiralis]
Length = 492
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/189 (71%), Positives = 158/189 (83%), Gaps = 1/189 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGD+EGLIDKVNELKLD+N++L+EK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVQKLLGMGDLEGLIDKVNELKLDENDQLLEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGF QDF+SKG+EQES RLKRLMTIMDSMND ELD+ +LF KQ GR RVA+
Sbjct: 349 MSMIPGFGQDFMSKGNEQESAKRLKRLMTIMDSMNDNELDHLKPYELFQKQQGRFGRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI-TKNVNQTQMMKLNQQMAKMMD 194
G+G + +EVK+L+ QY KFA +VKKMG IKGLFKGGD+ +K VN Q+ KLNQQMAKMMD
Sbjct: 409 GSGTSIQEVKELMQQYKKFAEMVKKMGSIKGLFKGGDMSSKTVNPAQLAKLNQQMAKMMD 468
Query: 195 PRVLHQMGE 203
PRVL QMG+
Sbjct: 469 PRVLQQMGK 477
>gi|386697097|gb|AFJ22009.1| signal recognition particle protein 54k, partial [Afronothrus sp.
AD453]
Length = 453
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 150/172 (87%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQF NIMKMGPFSQI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFSQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D + SE ESM+RLKRLMTIMDSM+D ELD+R+GAKLF+KQ RI RV++
Sbjct: 342 LNMIPGFGADLVKGASEAESMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIARVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFKGGD+ KNVN TQM KLNQ
Sbjct: 402 GSGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKGGDMAKNVNPTQMAKLNQ 453
>gi|386697141|gb|AFJ22031.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD833]
Length = 464
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/183 (71%), Positives = 157/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD+N++LI+K+KHG+FTLRDMYEQ NIMKMGPFSQI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDENDQLIDKLKHGEFTLRDMYEQLANIMKMGPFSQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + + SE ESM++LKR+MTIMDSM+DGELD+R+G+KLFSKQ R+ RVA+
Sbjct: 342 LSMIPGFGAELSNCTSEAESMSKLKRMMTIMDSMSDGELDSREGSKLFSKQPTRVARVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAG+T EV++L++Q+TKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGMTRAEVQELLTQFTKFAAVVKKMGGIKGLFKSGDMMKNVNPNQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697137|gb|AFJ22029.1| signal recognition particle protein 54k, partial [Hemisarcoptidae
gen. sp. AD666]
Length = 464
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 154/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE+LI+K+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEQLIDKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM +LKR+MTIMDSM+D ELD+R+G+KLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMGKLKRMMTIMDSMSDSELDSREGSKLFSKQPTRMVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT EV++L+ Q+TKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLNQQMAKM+DP
Sbjct: 402 GAGVTRAEVQELLGQFTKFAAVVKKMGGIKGLFKSGDMMKNVNPTQMAKLNQQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|387018700|gb|AFJ51468.1| signal recognition particle 54A [Crotalus adamanteus]
Length = 456
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/167 (77%), Positives = 151/167 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQM 182
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNVN +Q+
Sbjct: 409 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQI 455
>gi|386697111|gb|AFJ22016.1| signal recognition particle protein 54k, partial [Aphodanoetus
teinophallus]
Length = 444
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/183 (70%), Positives = 154/183 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL++N+ELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEENDELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF + SE ES ARLKR+MTIMDSM+DGELD+R+GAKLF++Q RI R+A+
Sbjct: 322 LGMIPGFGPEMAQGASEAESAARLKRMMTIMDSMSDGELDSREGAKLFNRQPSRIARIAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV ++EV +L+SQYTKFA +VKKMGG+KGLFK GD +KNVN QM KLN QMAKM+DP
Sbjct: 382 GAGVWKREVAELLSQYTKFAQMVKKMGGMKGLFKPGDFSKNVNPMQMAKLNHQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|198432537|ref|XP_002131641.1| PREDICTED: similar to signal recognition particle 54 [Ciona
intestinalis]
Length = 497
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/187 (71%), Positives = 156/187 (83%), Gaps = 1/187 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEEL++K+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFVRKLLNMGDIEGLIDKVNELKLDDNEELLDKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGF+ DF++KG E++S RLKRLMTIMDSM D ELD++DGAKLFSK R+ RVA+
Sbjct: 349 MSMIPGFN-DFMTKGHEKDSTERLKRLMTIMDSMTDEELDHKDGAKLFSKNPSRVARVAR 407
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+G KEV +L+ Q+ KFA +VKKMGG+KGLFK G + KNVN +QM +LN QMAK+MDP
Sbjct: 408 GSGTLPKEVNELLGQHGKFAQMVKKMGGMKGLFKPGGMDKNVNPSQMARLNGQMAKLMDP 467
Query: 196 RVLHQMG 202
RVL QMG
Sbjct: 468 RVLQQMG 474
>gi|386697525|gb|AFJ22223.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD636]
Length = 460
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 153/183 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLD+NEELIEK+KHG+FT+RDMYEQ N MKMGP +QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVSELKLDENEELIEKLKHGEFTIRDMYEQITNFMKMGPINQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD RDG KLF KQ R +RV++
Sbjct: 338 LSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDTELDARDGTKLFYKQPNRFSRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT+++V+DL+SQY KF AVVK+MGGIKGLFKGGD+ KNVN TQM+KLNQQMAKM+DP
Sbjct: 398 GAGVTQRDVQDLLSQYNKFKAVVKRMGGIKGLFKGGDLNKNVNPTQMLKLNQQMAKMIDP 457
Query: 196 RVL 198
R+L
Sbjct: 458 RIL 460
>gi|386697151|gb|AFJ22036.1| signal recognition particle protein 54k, partial [Vidia sp. AD1098]
Length = 453
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 148/172 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN TQM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPTQMAKLNQ 453
>gi|386697119|gb|AFJ22020.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD655]
Length = 464
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/183 (71%), Positives = 153/183 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 342 LNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV +EV++L+SQYTKFA +VKKMGG+KGLFK GD+TKNVN QM KLN QMAKM+DP
Sbjct: 402 GAGVFRREVQELLSQYTKFAQMVKKMGGMKGLFKQGDLTKNVNPMQMAKLNHQMAKMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697139|gb|AFJ22030.1| signal recognition particle protein 54k, partial [Congovidia sp.
AD699]
Length = 464
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 153/183 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE+LI+K+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEQLIDKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM +LKR+MTIMDSM+D ELD+R+G+KLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMGKLKRMMTIMDSMSDSELDSREGSKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAG + EV++L+ Q+T+FA VVKKMGGIKGLFK GD++KNVN TQM KLNQQMA+M+DP
Sbjct: 402 GAGASRAEVQELLVQFTRFAGVVKKMGGIKGLFKSGDLSKNVNPTQMAKLNQQMARMIDP 461
Query: 196 RVL 198
RVL
Sbjct: 462 RVL 464
>gi|386697149|gb|AFJ22035.1| signal recognition particle protein 54k, partial [Vidia sp. AD452]
Length = 432
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/171 (76%), Positives = 147/171 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN TQM KLN
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPTQMAKLN 432
>gi|386697153|gb|AFJ22037.1| signal recognition particle protein 54k, partial [Crabrovidia sp.
AD610]
Length = 449
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 148/172 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLANIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 338 LNMIPGFGAELSKCTSEAESMFRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN TQM KLNQ
Sbjct: 398 GAGVTKREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPTQMAKLNQ 449
>gi|386697221|gb|AFJ22071.1| signal recognition particle protein 54k, partial [Sancassania aff.
sphaerogaster AD361]
Length = 433
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 148/172 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN +QM KLNQ
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPSQMAKLNQ 433
>gi|386697233|gb|AFJ22077.1| signal recognition particle protein 54k, partial [Naiacus sp.
AD305]
Length = 433
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 433
>gi|386697155|gb|AFJ22038.1| signal recognition particle protein 54k, partial [Hyadesia
curassaviensis]
Length = 453
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIARVAK 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPNQMAKLNQ 453
>gi|386697243|gb|AFJ22082.1| signal recognition particle protein 54k, partial [Histiogaster sp.
AD356]
Length = 450
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 279 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 338
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 339 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRVAR 398
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 399 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNPAQMAKLNQ 450
>gi|386697157|gb|AFJ22039.1| signal recognition particle protein 54k, partial [Hyadesia aff.
curassaviensis AD605]
Length = 453
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIARVAK 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPNQMAKLNQ 453
>gi|386697673|gb|AFJ22297.1| signal recognition particle protein 54k, partial [Carnilistrophorus
rhynchocyoni]
Length = 453
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697565|gb|AFJ22243.1| signal recognition particle protein 54k, partial [Xolalges sp. n.
AD600]
Length = 453
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 148/172 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E+ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCTTEEESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV+DL+SQYTKFAAVVKKMGGIKGLF+ GD+TKNVN QM KLNQ
Sbjct: 402 GSGVTQREVQDLLSQYTKFAAVVKKMGGIKGLFRSGDLTKNVNSVQMAKLNQ 453
>gi|386697681|gb|AFJ22301.1| signal recognition particle protein 54k, partial [Listrophorus
validus]
Length = 453
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697485|gb|AFJ22203.1| signal recognition particle protein 54k, partial [Echimytricalges
guyanensis]
Length = 453
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAK+FSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKIFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697135|gb|AFJ22028.1| signal recognition particle protein 54k, partial [Suidasia
nesbitti]
Length = 433
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 433
>gi|386697675|gb|AFJ22298.1| signal recognition particle protein 54k, partial [Olistrophorus
blarinae]
Length = 453
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGPELAKCASETESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697175|gb|AFJ22048.1| signal recognition particle protein 54k, partial [Canestrinia
pentodontis]
Length = 453
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697631|gb|AFJ22276.1| signal recognition particle protein 54k, partial [Montesauria sp.
n. AD617]
Length = 453
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI+KNVN QM+KLN
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDISKNVNSAQMLKLNH 453
>gi|386697499|gb|AFJ22210.1| signal recognition particle protein 54k, partial [Sturnophagoides
bakeri]
Length = 453
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697433|gb|AFJ22177.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD555]
Length = 453
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GV ++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM KLNQ
Sbjct: 402 GSGVAQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQMAKLNQ 453
>gi|386697685|gb|AFJ22303.1| signal recognition particle protein 54k, partial [Trichoecius
tenax]
Length = 433
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN TQM KLNQ
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLMKNVNPTQMAKLNQ 433
>gi|386697169|gb|AFJ22045.1| signal recognition particle protein 54k, partial [Chaetodactylus
krombeini]
Length = 453
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELSKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697235|gb|AFJ22078.1| signal recognition particle protein 54k, partial [Naiadacarus
arboricola]
Length = 433
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV +
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVGR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 433
>gi|386697481|gb|AFJ22201.1| signal recognition particle protein 54k, partial [Schoutedenocoptes
aquilae]
Length = 453
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697309|gb|AFJ22115.1| signal recognition particle protein 54k, partial [Rectijanua sp. n.
AD629]
Length = 444
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/183 (68%), Positives = 152/183 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+DKV+ELKLD NEE IEK+KHG+FT+RDMYEQ NIMKMGP +QI
Sbjct: 262 PFISKLLGMGDIEGLMDKVSELKLDGNEEFIEKLKHGEFTIRDMYEQLTNIMKMGPLNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+R+K +MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 322 LNMIPGFGAELAECASEAESMSRIKHMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
G+GV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ+MA+M+DP
Sbjct: 382 GSGVKQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPMQMAKLNQKMAQMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697453|gb|AFJ22187.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD582]
Length = 453
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697611|gb|AFJ22266.1| signal recognition particle protein 54k, partial [Monojoubertia
hemiphylla]
Length = 433
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM+KLN
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNSAQMLKLNH 433
>gi|386697461|gb|AFJ22191.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD601]
Length = 453
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697249|gb|AFJ22085.1| signal recognition particle protein 54k, partial [Heterocoptidae
gen. n. sp. AD552]
Length = 453
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEEL+EK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSK 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697337|gb|AFJ22129.1| signal recognition particle protein 54k, partial [Coraciacarus
americanus]
Length = 453
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697697|gb|AFJ22309.1| signal recognition particle protein 54k, partial [Yunkeracarus
hylomyscus]
Length = 453
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEVESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697237|gb|AFJ22079.1| signal recognition particle protein 54k, partial [Askinasia sp.
AD304]
Length = 433
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI R+A+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMFRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRIAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 433
>gi|386697107|gb|AFJ22014.1| signal recognition particle protein 54k, partial [Bonomoia sp.
AD653]
Length = 444
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/183 (68%), Positives = 151/183 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLI+KVNELKLD+NEELI K+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIEKVNELKLDENEELINKLKHGEFTLRDMYEQLSNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + S+ ES ARLKR++TIMDSM+D ELD+R+GAKLF++Q RITRVA
Sbjct: 322 LSMIPGFGPELTRNTSDAESAARLKRMLTIMDSMSDSELDSREGAKLFNRQPNRITRVAA 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV +EV++L+SQY KFA +VKKMGG+KGLFK GDI+KN+N QM KLN QMAKM+DP
Sbjct: 382 GAGVWRREVQELLSQYGKFAQMVKKMGGMKGLFKQGDISKNINPMQMAKLNHQMAKMIDP 441
Query: 196 RVL 198
RVL
Sbjct: 442 RVL 444
>gi|386697259|gb|AFJ22090.1| signal recognition particle protein 54k, partial [Picidectes
chapini]
Length = 453
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV +KEV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 402 GAGVFQKEVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQ 453
>gi|386697563|gb|AFJ22242.1| signal recognition particle protein 54k, partial [Xolalgoides sp.
AD649]
Length = 453
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVSELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF Q+ SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGQELAKNASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G GVT++EV++L++QYTKFAAVVKKMGGIKGLF+ GD++KNVN QM KLNQ
Sbjct: 402 GCGVTQREVQELLTQYTKFAAVVKKMGGIKGLFRSGDLSKNVNPAQMAKLNQ 453
>gi|386697167|gb|AFJ22044.1| signal recognition particle protein 54k, partial [Sennertia
zhelochovtsevi]
Length = 453
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAXLSKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|402589104|gb|EJW83036.1| signal recognition particle protein SRP54 [Wuchereria bancrofti]
Length = 503
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 155/188 (82%), Gaps = 1/188 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+ KVNE+ ++DNEELI+++KHG FTLRDMYEQFQNIMKMGPF+QI
Sbjct: 293 PFVQKLLGMGDIEGLVKKVNEIGIEDNEELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQI 352
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGF DF+SKG+EQES +RLK+LMTIMDSM+D ELD+ LFSK+ GR+ RVA+
Sbjct: 353 MSMIPGFGPDFMSKGNEQESQSRLKKLMTIMDSMSDAELDHPKANDLFSKEPGRVQRVAR 412
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI-TKNVNQTQMMKLNQQMAKMMD 194
G+G EVK+L++QY KFA +VKKMG +KGLFK GD+ TKN+N +Q+ KLNQQMAKMMD
Sbjct: 413 GSGTATSEVKELLTQYKKFADMVKKMGSMKGLFKNGDMNTKNINPSQLQKLNQQMAKMMD 472
Query: 195 PRVLHQMG 202
PRVL QMG
Sbjct: 473 PRVLQQMG 480
>gi|393907084|gb|EFO21698.2| signal recognition particle protein [Loa loa]
Length = 501
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 155/188 (82%), Gaps = 1/188 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+ KVNE+ ++DNEELI+++KHG FTLRDMYEQFQNIMKMGPF+QI
Sbjct: 289 PFVQKLLGMGDIEGLVKKVNEIGIEDNEELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGF DF+SKG+EQES +RLK+LMTIMDSM+D ELD+ LFSK+ GR+ RVA+
Sbjct: 349 MSMIPGFGPDFMSKGNEQESQSRLKKLMTIMDSMSDAELDHPKANDLFSKEPGRVQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI-TKNVNQTQMMKLNQQMAKMMD 194
G+G EVK+L++QY KFA +VKKMG +KGLFK GD+ TKN+N +Q+ KLNQQMAKMMD
Sbjct: 409 GSGTATSEVKELLTQYKKFADMVKKMGSMKGLFKNGDMNTKNINPSQLQKLNQQMAKMMD 468
Query: 195 PRVLHQMG 202
PRVL QMG
Sbjct: 469 PRVLQQMG 476
>gi|386697289|gb|AFJ22105.1| signal recognition particle protein 54k, partial [Pterolichus
obtusus]
Length = 453
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GAGVMQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|170579858|ref|XP_001895013.1| signal recognition particle 54 kDa protein (SRP54) [Brugia malayi]
gi|158598201|gb|EDP36148.1| signal recognition particle 54 kDa protein (SRP54), putative
[Brugia malayi]
Length = 501
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 155/188 (82%), Gaps = 1/188 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+ KVNE+ ++DNEELI+++KHG FTLRDMYEQFQNIMKMGPF+QI
Sbjct: 289 PFVQKLLGMGDIEGLVKKVNEIGIEDNEELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGF DF+SKG+EQES +RLK+LMTIMDSM+D ELD+ LFSK+ GR+ RVA+
Sbjct: 349 MSMIPGFGPDFMSKGNEQESQSRLKKLMTIMDSMSDAELDHPKANDLFSKEPGRVQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI-TKNVNQTQMMKLNQQMAKMMD 194
G+G EVK+L++QY KFA +VKKMG +KGLFK GD+ TKN+N +Q+ KLNQQMAKMMD
Sbjct: 409 GSGTATSEVKELLTQYKKFADMVKKMGSMKGLFKNGDMNTKNINPSQLQKLNQQMAKMMD 468
Query: 195 PRVLHQMG 202
PRVL QMG
Sbjct: 469 PRVLQQMG 476
>gi|386697367|gb|AFJ22144.1| signal recognition particle protein 54k, partial [Stenopteronyssus
proctorae]
Length = 453
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+DGELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697643|gb|AFJ22282.1| signal recognition particle protein 54k, partial [Pterodectinae
gen. sp. AD648]
Length = 453
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GDI KNVN QM+KLN
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDIAKNVNSAQMLKLNH 453
>gi|386697223|gb|AFJ22072.1| signal recognition particle protein 54k, partial [Acotyledon
paradoxa]
Length = 433
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDPELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNPNQMAKLNQ 433
>gi|386697583|gb|AFJ22252.1| signal recognition particle protein 54k, partial [Proctophyllodes
detruncatus]
Length = 453
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV +L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN
Sbjct: 402 GAGVTQREVHELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNH 453
>gi|386697527|gb|AFJ22224.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD798]
Length = 444
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/183 (68%), Positives = 151/183 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLD+N+ELIEK+KHG+FT+RDMYEQ N MKMGP +QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVSELKLDENDELIEKLKHGEFTIRDMYEQITNFMKMGPINQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD RDG KLF KQ R RV++
Sbjct: 322 LSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDTELDARDGTKLFYKQPKRFFRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT ++V++L+SQY KF AVVK+MGGIKGLF+GGD+ KNVN TQM+KLNQQMAKM+DP
Sbjct: 382 GAGVTPRDVQELLSQYNKFRAVVKRMGGIKGLFRGGDLNKNVNPTQMLKLNQQMAKMIDP 441
Query: 196 RVL 198
R+L
Sbjct: 442 RIL 444
>gi|312079906|ref|XP_003142374.1| signal recognition particle protein [Loa loa]
Length = 530
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 155/188 (82%), Gaps = 1/188 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+ KVNE+ ++DNEELI+++KHG FTLRDMYEQFQNIMKMGPF+QI
Sbjct: 318 PFVQKLLGMGDIEGLVKKVNEIGIEDNEELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQI 377
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGF DF+SKG+EQES +RLK+LMTIMDSM+D ELD+ LFSK+ GR+ RVA+
Sbjct: 378 MSMIPGFGPDFMSKGNEQESQSRLKKLMTIMDSMSDAELDHPKANDLFSKEPGRVQRVAR 437
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI-TKNVNQTQMMKLNQQMAKMMD 194
G+G EVK+L++QY KFA +VKKMG +KGLFK GD+ TKN+N +Q+ KLNQQMAKMMD
Sbjct: 438 GSGTATSEVKELLTQYKKFADMVKKMGSMKGLFKNGDMNTKNINPSQLQKLNQQMAKMMD 497
Query: 195 PRVLHQMG 202
PRVL QMG
Sbjct: 498 PRVLQQMG 505
>gi|386697533|gb|AFJ22227.1| signal recognition particle protein 54k, partial [Trochiloptes sp.
AD1143]
Length = 464
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/183 (68%), Positives = 150/183 (81%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLD+NEELIEK+KHG+FT+RDMYEQ N MKMGP +QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVSELKLDENEELIEKLKHGEFTIRDMYEQITNFMKMGPINQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE E+M+RLKR+MTIMDSM+D ELD RDG KLF KQ R RVA+
Sbjct: 342 LSMIPGFGAELAQCTSEAETMSRLKRMMTIMDSMSDTELDARDGTKLFYKQPNRFARVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV++++V++L+SQY KF AVVKKMGGIKGLFKGGD+ KNV+ TQM KLNQQMAKM+ P
Sbjct: 402 GAGVSQRDVQELLSQYNKFKAVVKKMGGIKGLFKGGDLNKNVHPTQMFKLNQQMAKMIHP 461
Query: 196 RVL 198
R+L
Sbjct: 462 RIL 464
>gi|386697219|gb|AFJ22070.1| signal recognition particle protein 54k, partial [Sancassania
nesbitti]
Length = 433
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV+++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN +QM KLNQ
Sbjct: 382 GAGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNPSQMAKLNQ 433
>gi|386697579|gb|AFJ22250.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD638]
Length = 453
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNH 453
>gi|386697251|gb|AFJ22086.1| signal recognition particle protein 54k, partial [Neottialges
vitzthumi]
Length = 433
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 382 GAGVMQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLTKNVNPAQMAKLNQ 433
>gi|386697587|gb|AFJ22254.1| signal recognition particle protein 54k, partial [Proctophyllodes
ampelidis]
gi|386697599|gb|AFJ22260.1| signal recognition particle protein 54k, partial [Proctophyllodes
canadensis]
Length = 453
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ R+ RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM+KLN
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNSAQMLKLNH 453
>gi|386697489|gb|AFJ22205.1| signal recognition particle protein 54k, partial [Psoroptes ovis]
Length = 449
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLID+VNELKLDDNEELIEKIKHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDRVNELKLDDNEELIEKIKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAG T++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 398 GAGCTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 449
>gi|386697321|gb|AFJ22121.1| signal recognition particle protein 54k, partial [Aetacarus sp. n.
AD537]
Length = 450
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI+GLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 279 PFISKLLGMGDIKGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 338
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 339 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 398
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+ KNVN QM KLNQ
Sbjct: 399 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLAKNVNPAQMAKLNQ 450
>gi|386697159|gb|AFJ22040.1| signal recognition particle protein 54k, partial [Carpoglyphus
lactis]
Length = 434
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 147/172 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 263 PFISKLLGMGDIEGLIDKVSELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 322
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQT RI RVA+
Sbjct: 323 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQTTRIVRVAR 382
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L++QYTKFA VVKKMGGIKGLFK GD+TKNVN QM KLNQ
Sbjct: 383 GAGVTQREVQELLAQYTKFATVVKKMGGIKGLFKSGDLTKNVNPNQMAKLNQ 434
>gi|386697225|gb|AFJ22073.1| signal recognition particle protein 54k, partial [Aleuroglyphus
ovatus]
Length = 433
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 144/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFA VVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 382 GAGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 433
>gi|386697133|gb|AFJ22027.1| signal recognition particle protein 54k, partial [Tortonia sp.
AD560]
Length = 432
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 145/171 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLN
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLN 432
>gi|386697197|gb|AFJ22059.1| signal recognition particle protein 54k, partial [Marsupialichus
brasiliensis]
Length = 433
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV +
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVGR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVKKMGGIKGLFK G+ TKNVN QM KLNQ
Sbjct: 382 GAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKPGEFTKNVNPAQMAKLNQ 433
>gi|386697553|gb|AFJ22237.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD616]
Length = 453
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 146/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L++QYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLNQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697529|gb|AFJ22225.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD882]
Length = 460
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/183 (67%), Positives = 150/183 (81%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLD+N+ELIEK+KHG+FT+RDMYEQ N MKMGP +QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVSELKLDENDELIEKLKHGEFTIRDMYEQITNFMKMGPINQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD RDG KLF KQ R RV++
Sbjct: 338 LSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDTELDARDGTKLFYKQPKRFFRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT ++V++L+ QY KF AVVK+MGGIKGLF+GGD+ KNVN TQM+KLNQQMAKM+DP
Sbjct: 398 GAGVTPRDVQELLGQYNKFRAVVKRMGGIKGLFRGGDLNKNVNPTQMLKLNQQMAKMIDP 457
Query: 196 RVL 198
R+L
Sbjct: 458 RIL 460
>gi|386697201|gb|AFJ22061.1| signal recognition particle protein 54k, partial [Horstia sp.
AD301]
Length = 453
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 144/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+G KLFSKQ RI R+A+
Sbjct: 342 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGTKLFSKQPTRIVRIAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697375|gb|AFJ22148.1| signal recognition particle protein 54k, partial [Pteroherpus sp.
AD615]
Length = 453
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 144/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELI K+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKMLGMGDIEGLIDKVNELKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLF+ GD+ KNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGDLAKNVNPAQMAKLNQ 453
>gi|386697645|gb|AFJ22283.1| signal recognition particle protein 54k, partial [Metapterodectes
sp. n. AD556]
Length = 453
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+SQYTKFAAVVK+MGGIKGLFK GDI KNVN QM KLN
Sbjct: 402 GAGVTQREVQELLSQYTKFAAVVKRMGGIKGLFKTGDIGKNVNPAQMQKLNH 453
>gi|386697531|gb|AFJ22226.1| signal recognition particle protein 54k, partial [Dermationidae sp.
AD695]
Length = 444
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/183 (67%), Positives = 150/183 (81%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+ELKLD+N+ELIEK+KHG+FT+RDMYEQ N MKMGP +QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVSELKLDENDELIEKLKHGEFTIRDMYEQITNFMKMGPINQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD RDG KLF KQ R RV++
Sbjct: 322 LSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDTELDARDGTKLFYKQPKRFFRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT ++V++L+ QY KF AVVK+MGGIKGLF+GGD+ KNVN TQM+KLNQQMAKM+DP
Sbjct: 382 GAGVTPRDVQELLGQYNKFRAVVKRMGGIKGLFRGGDLNKNVNPTQMLKLNQQMAKMIDP 441
Query: 196 RVL 198
R+L
Sbjct: 442 RIL 444
>gi|386697211|gb|AFJ22066.1| signal recognition particle protein 54k, partial [Diadasiopus
eickworti]
Length = 433
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 143/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV +EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 382 GAGVMTREVQELLSQYTKFAAVVKKMGGIKGLFKTGDLAKNVNPAQMAKLNQ 433
>gi|386697195|gb|AFJ22058.1| signal recognition particle protein 54k, partial [Marmosopus sp.
AD727]
Length = 433
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI RV++
Sbjct: 322 LNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADLELDSREGAKLFSKQPTRIVRVSR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L++QYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLN
Sbjct: 382 GAGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNH 433
>gi|324502545|gb|ADY41120.1| Signal recognition particle 54 kDa protein [Ascaris suum]
Length = 503
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 156/188 (82%), Gaps = 1/188 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+ KVNE+ L+DNEELI+++KHG FTLRDMYEQFQNIMKMGPF+QI
Sbjct: 289 PFVQKLLGMGDIEGLVKKVNEMGLEDNEELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M MIPGF QDF++KG+EQES +RLK+LMTIMDSM+D ELD+ LFSK+ GR+ RVA+
Sbjct: 349 MSMIPGFGQDFMTKGNEQESQSRLKKLMTIMDSMSDLELDHPKANDLFSKEPGRVQRVAR 408
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI-TKNVNQTQMMKLNQQMAKMMD 194
G+G + +VK+L++QY KFA +VKKMG +KGLFK GD+ TKN+N +Q+ KLNQQMAKMMD
Sbjct: 409 GSGTSVSDVKELLTQYKKFADMVKKMGSMKGLFKNGDMNTKNINPSQLQKLNQQMAKMMD 468
Query: 195 PRVLHQMG 202
PRVL MG
Sbjct: 469 PRVLQHMG 476
>gi|386697171|gb|AFJ22046.1| signal recognition particle protein 54k, partial [Chaetodactylus
lithurgi]
Length = 431
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 144/170 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELSKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKL 185
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KL
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMXKL 431
>gi|386697437|gb|AFJ22179.1| signal recognition particle protein 54k, partial [Analges
passerinus]
Length = 448
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 123/167 (73%), Positives = 143/167 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + +E ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCATEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQM 182
GAGV ++EV++L+SQYTKFAAVVKKMGGIKGLFKGGD+TKNVN QM
Sbjct: 402 GAGVAQREVQELLSQYTKFAAVVKKMGGIKGLFKGGDLTKNVNPAQM 448
>gi|386697267|gb|AFJ22094.1| signal recognition particle protein 54k, partial [Freyana anatina]
Length = 433
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDN ELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLK++MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 322 LNMIPGFGAELAKCASEAESMSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 382 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 433
>gi|386697293|gb|AFJ22107.1| signal recognition particle protein 54k, partial [Grallobia sp.
AD959]
Length = 453
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 145/172 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL DNEEL+EK+KHG+FT+RDMYEQ NIMKMGPF+Q+
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLADNEELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQM 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF D SE ESM+RLKR+MTIMDSM+D ELD+R+GAK+FSKQ R+ RVA+
Sbjct: 342 LNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDTELDSREGAKIFSKQPTRVMRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFAAVVKKMGGIKGLFK GD+ KNVN QM KLNQ
Sbjct: 402 GSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGDLAKNVNPAQMAKLNQ 453
>gi|386697181|gb|AFJ22051.1| signal recognition particle protein 54k, partial [aff. Alabidopus
sp. AD591]
Length = 433
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 144/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM D ELD+R+GAKLFSKQ RI R+A+
Sbjct: 322 LNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRIAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GVT++EV++L+SQYTKFA VVKKMGGIKGLFK GD+ KNVN QM +LNQ
Sbjct: 382 GSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGDLAKNVNPAQMARLNQ 433
>gi|386697145|gb|AFJ22033.1| signal recognition particle protein 54k, partial [Procalvolia sp.
AD1231]
Length = 453
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 143/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEEL+EK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDNEELLEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM++LKR+MTIMDSM D ELD+R+GAKLFSKQ R RVA+
Sbjct: 342 LNMIPGFGAELSKNTSEAESMSKLKRMMTIMDSMADSELDSREGAKLFSKQPTRAVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV EV++LISQYTKFAAVVKKMGGIKGLF+ GDI+KNVN TQM KLNQ
Sbjct: 402 GAGVRLCEVQELISQYTKFAAVVKKMGGIKGLFRAGDISKNVNPTQMAKLNQ 453
>gi|119586299|gb|EAW65895.1| hCG2033479, isoform CRA_e [Homo sapiens]
Length = 341
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/184 (70%), Positives = 152/184 (82%), Gaps = 4/184 (2%)
Query: 19 CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
C IC G D +LK + + I GQFTLRDMYEQFQNIMKMGPFSQI+GM
Sbjct: 133 CLICADTFRAGAFD---QLKQNATKARIP-FYGGQFTLRDMYEQFQNIMKMGPFSQILGM 188
Query: 79 IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
IPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+G+G
Sbjct: 189 IPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSG 248
Query: 139 VTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVL 198
V+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDPRVL
Sbjct: 249 VSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVL 308
Query: 199 HQMG 202
H MG
Sbjct: 309 HHMG 312
>gi|444722487|gb|ELW63179.1| Signal recognition particle 54 kDa protein [Tupaia chinensis]
Length = 594
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/156 (77%), Positives = 139/156 (89%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 184 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 243
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+
Sbjct: 244 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 303
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGG 171
G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFK
Sbjct: 304 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKAA 339
>gi|386697411|gb|AFJ22166.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD874]
Length = 452
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/171 (71%), Positives = 143/171 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGVT++EV++L++QY+KFA VVKKMGGIKGLFK GD KNVN QM KLN
Sbjct: 402 GAGVTQREVQELLNQYSKFAGVVKKMGGIKGLFKSGDPAKNVNPAQMAKLN 452
>gi|386697147|gb|AFJ22034.1| signal recognition particle protein 54k, partial
[Thalassophagacarus faime]
Length = 453
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 142/172 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL++N EL+EK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEENGELLEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESMA+LKR+MTIMDSM D ELD+R+GAKLFSKQ R RVA+
Sbjct: 342 LNMIPGFGAELSKNTSEAESMAKLKRMMTIMDSMADSELDSREGAKLFSKQPSRAVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV EV++LISQYTKFAAVVKKMGGIKGLF+ GDITKNVN TQM KLNQ
Sbjct: 402 GAGVRLIEVQELISQYTKFAAVVKKMGGIKGLFRAGDITKNVNPTQMAKLNQ 453
>gi|119586298|gb|EAW65894.1| hCG2033479, isoform CRA_d [Homo sapiens]
Length = 337
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/150 (80%), Positives = 140/150 (93%)
Query: 52 GQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMND 111
GQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND
Sbjct: 162 GQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMND 221
Query: 112 GELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGG 171
ELD+ DGAK+FSKQ GRI RVA+G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGG
Sbjct: 222 QELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGG 281
Query: 172 DITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
D++KNV+Q+QM KLNQQMAKMMDPRVLH M
Sbjct: 282 DMSKNVSQSQMAKLNQQMAKMMDPRVLHHM 311
>gi|386697413|gb|AFJ22167.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD900]
Length = 448
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/171 (71%), Positives = 142/171 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 338 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGVT++EV++L+ QY+KFA VVKKMGGIKGLFK GD KNVN QM KLN
Sbjct: 398 GAGVTQREVQELLIQYSKFAGVVKKMGGIKGLFKSGDPAKNVNPAQMAKLN 448
>gi|386697417|gb|AFJ22169.1| signal recognition particle protein 54k, partial [Megniniella sp.
AD966]
Length = 449
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 144/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL++NEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLENNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + S+ ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RV++
Sbjct: 338 LNMIPGFGAELAKCASDAESMSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGVT++EV++L+ QY+KF+AVVKKMGGIKGLFK GD KNVN QM KLNQ
Sbjct: 398 GAGVTQREVQELLHQYSKFSAVVKKMGGIKGLFKSGDPAKNVNPAQMAKLNQ 449
>gi|386697117|gb|AFJ22019.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD692]
Length = 449
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 143/172 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++QT RI RVA+
Sbjct: 338 LNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQTNRIVRVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV +EV++L+SQYTKFA +VKKMGG+KGLFK GD+TKNVN QM KLN
Sbjct: 398 GAGVFRREVQELLSQYTKFAQMVKKMGGMKGLFKQGDLTKNVNPMQMAKLNH 449
>gi|386697523|gb|AFJ22222.1| signal recognition particle protein 54k, partial [Neodermation sp.
AD858]
Length = 459
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 149/183 (81%), Gaps = 1/183 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGL+DKV++LKL DNEELIEK+KHG+FT+RDMYEQ N MKMGP +QI
Sbjct: 278 PFISKLLGMGDIEGLMDKVSQLKLGDNEELIEKLKHGEFTIRDMYEQITNFMKMGPLNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPG + SE ES ARLKR+MTIMDSM+D ELD+RDG KLF+KQ R+ RV++
Sbjct: 338 LNMIPGIGAELAKCTSEAESYARLKRMMTIMDSMSDSELDSRDGGKLFAKQPTRVLRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT++EV +LISQYTKF AVVKKMGGIKGLFK GD++K++N Q KLNQQMAK++DP
Sbjct: 398 GAGVTQREVIELISQYTKFKAVVKKMGGIKGLFK-GDLSKSINPLQFAKLNQQMAKIIDP 456
Query: 196 RVL 198
R+L
Sbjct: 457 RLL 459
>gi|291223336|ref|XP_002731666.1| PREDICTED: signal recognition particle 54kDa-like [Saccoglossus
kowalevskii]
Length = 492
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 147/187 (78%), Gaps = 19/187 (10%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKV+EL LDDNEELI K+KHG+ ++
Sbjct: 289 PFVSKLLGMGDIEGLIDKVSELNLDDNEELINKLKHGK-------------------KRV 329
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MIPGF DFLSKG+EQESMARLKRLMTIMDSMND ELD+R+GAKLF++ GRI RVA+
Sbjct: 330 QSMIPGFGSDFLSKGNEQESMARLKRLMTIMDSMNDEELDSREGAKLFTRSQGRIQRVAR 389
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV+ +EV++L+SQY KFAA+VKKMGGIKGLFKGGD+ KNVN +QMMKLNQQMAKMMDP
Sbjct: 390 GAGVSVREVQELLSQYQKFAAMVKKMGGIKGLFKGGDMMKNVNPSQMMKLNQQMAKMMDP 449
Query: 196 RVLHQMG 202
R+LHQMG
Sbjct: 450 RILHQMG 456
>gi|386697257|gb|AFJ22089.1| signal recognition particle protein 54k, partial [Hypoderatidae
gen. sp. AD887]
Length = 463
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 156/182 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL++NEELIEK+KHG+FT+RDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEENEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+R+GAKLFSKQ RI RVA+
Sbjct: 342 LNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV +KEV++L+SQYTKFAAVVKKMGGIKGLFK GD+TKNVN QM KLNQQMAKM+DP
Sbjct: 402 GAGVFQKEVQELLSQYTKFAAVVKKMGGIKGLFKSGDLTKNVNPAQMAKLNQQMAKMIDP 461
Query: 196 RV 197
RV
Sbjct: 462 RV 463
>gi|386697127|gb|AFJ22024.1| signal recognition particle protein 54k, partial [Sellea sp. AD658]
Length = 449
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 142/172 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 338 LNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV +EV++L+SQYTKFA +VKKMGG+KGLFK GD+TKNVN QM KLN
Sbjct: 398 GAGVWRREVQELLSQYTKFAQMVKKMGGMKGLFKQGDLTKNVNPMQMAKLNH 449
>gi|386697121|gb|AFJ22021.1| signal recognition particle protein 54k, partial [Hormosianoetus
mallotae]
Length = 432
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/171 (70%), Positives = 142/171 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 322 LNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGV +EV++L+SQYTKFA +VKKMGG+KGLFK GD+TKNVN QM KLN
Sbjct: 382 GAGVWRREVQELLSQYTKFAQMVKKMGGMKGLFKQGDLTKNVNPMQMAKLN 432
>gi|386697129|gb|AFJ22025.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD652]
Length = 452
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/171 (70%), Positives = 142/171 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES +RLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 342 LNMIPGFGPELSKCASEAESASRLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGV +EV++L+SQYTKFA +VKKMGG+KGLFK GD+TKNVN QM KLN
Sbjct: 402 GAGVWRREVQELLSQYTKFAQMVKKMGGMKGLFKQGDLTKNVNPMQMAKLN 452
>gi|386697131|gb|AFJ22026.1| signal recognition particle protein 54k, partial [Anoetus sp.
AD664]
Length = 449
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 142/172 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 338 LNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
GAGV ++V++L+SQYTKFA +VKKMGG+KGLFK GD+TKNVN QM KLN
Sbjct: 398 GAGVWRRDVQELLSQYTKFAQMVKKMGGMKGLFKQGDLTKNVNPMQMAKLNH 449
>gi|225714310|gb|ACO13001.1| Signal recognition particle 54 kDa protein [Lepeophtheirus
salmonis]
Length = 508
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 152/187 (81%), Gaps = 1/187 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI GLI KV E ++NE+LI KIKHG++T+RDMYEQF N+MKMGPFSQI
Sbjct: 289 PFVQKLLGMGDIVGLIKKVEECNFENNEDLINKIKHGEYTIRDMYEQFLNVMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ M+PGFSQ F++KGSEQ+S ARLK+++TIMDSMN+ ELD+R GAK+F K+ R+TR+A
Sbjct: 349 LSMVPGFSQSFMAKGSEQQSQARLKKMITIMDSMNEKELDDR-GAKIFIKEPTRVTRIAG 407
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E +V++L+ QY +F VVKKMGGIKGLF+GGD++KNVN QM +LN Q+AKMMDP
Sbjct: 408 GAGVYEGDVQELLKQYRQFEQVVKKMGGIKGLFRGGDMSKNVNPQQMAQLNNQIAKMMDP 467
Query: 196 RVLHQMG 202
VL Q+G
Sbjct: 468 SVLRQIG 474
>gi|386697109|gb|AFJ22015.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD678]
Length = 452
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/171 (70%), Positives = 142/171 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES +RLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 342 LNMIPGFGPELSKCTSEAESASRLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGV +EV++L+SQYTKFA +VKKMGG+KGLFK GD+TKNVN QM KLN
Sbjct: 402 GAGVWRREVQELLSQYTKFAQMVKKMGGMKGLFKQGDLTKNVNPMQMAKLN 452
>gi|386697105|gb|AFJ22013.1| signal recognition particle protein 54k, partial [Kanoetus sp. n.
AD763]
Length = 452
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/171 (69%), Positives = 142/171 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELI K+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 282 PFVSKLLGMGDIEGLIDKVNELKLEDNEELINKLKHGEFTLRDMYEQLNNIMKMGPFNQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ M+PGF + + S+ ES ARLKRLMTIMDSM+D ELD+++G+KLF++Q RI RVA+
Sbjct: 342 LSMLPGFGPEMMKNASDAESAARLKRLMTIMDSMSDSELDSKEGSKLFNRQPTRIVRVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGV ++EV+DL+ QYTKFA +VKKMGG+KGLFK GDITKNVN QM KLN
Sbjct: 402 GAGVYQREVQDLLLQYTKFAQMVKKMGGMKGLFKQGDITKNVNPMQMAKLN 452
>gi|386697123|gb|AFJ22022.1| signal recognition particle protein 54k, partial [Histiostoma
inquilinum]
Length = 432
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/171 (70%), Positives = 141/171 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 262 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 321
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 322 LNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIVRVAR 381
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN 186
GAGV +EV++L+SQYTKFA +VKKMGG+KGLFK GD+ KNVN QM KLN
Sbjct: 382 GAGVFRREVQELLSQYTKFAQMVKKMGGMKGLFKQGDLAKNVNPMQMAKLN 432
>gi|225710178|gb|ACO10935.1| Signal recognition particle 54 kDa protein [Caligus rogercresseyi]
Length = 509
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 150/187 (80%), Gaps = 1/187 (0%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDI GLI KV E ++NE+LI KIKHG++T+RDMYEQF N+MKMGPFSQI
Sbjct: 289 PFVQKLLGMGDIVGLIKKVEECNFENNEDLINKIKHGEYTIRDMYEQFLNVMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ M+PGFSQ F++KGSEQ+S A+LK+++TIMDSMND ELD+R GAK+F K+ R+ R+A
Sbjct: 349 LSMVPGFSQSFMAKGSEQQSQAKLKKMITIMDSMNDKELDDR-GAKIFMKEPSRVARIAG 407
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGV E EV +L+ QY +F VVKKMGG+KGLFKGGD++KNVN QM +LN Q+AKMMDP
Sbjct: 408 GAGVMEMEVLELLKQYRQFEQVVKKMGGMKGLFKGGDMSKNVNPQQMAQLNMQIAKMMDP 467
Query: 196 RVLHQMG 202
VL Q+G
Sbjct: 468 TVLRQIG 474
>gi|17539958|ref|NP_501507.1| Protein F21D5.7 [Caenorhabditis elegans]
gi|3876111|emb|CAA91040.1| Protein F21D5.7 [Caenorhabditis elegans]
Length = 496
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 152/182 (83%), Gaps = 3/182 (1%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL+D VN++ + DN+EL+ ++K GQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF
Sbjct: 297 MGDIAGLVDMVNDIGIQDNKELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFG 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+F++KG+EQES+ RLKR+MT+MDSM+D ELD+ ++LF+K+ R+ RVA+G+G ++E
Sbjct: 357 SEFMTKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQE 416
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKG--GDIT-KNVNQTQMMKLNQQMAKMMDPRVLHQ 200
V+DL++QY KF+ VVKK+G IKGLF G GDI KN+N +M +LNQQMAKMMDPRVL Q
Sbjct: 417 VRDLLAQYKKFSDVVKKIGSIKGLFNGKNGDINPKNMNPAKMAQLNQQMAKMMDPRVLQQ 476
Query: 201 MG 202
MG
Sbjct: 477 MG 478
>gi|341882493|gb|EGT38428.1| hypothetical protein CAEBREN_28899 [Caenorhabditis brenneri]
gi|341898754|gb|EGT54689.1| hypothetical protein CAEBREN_29982 [Caenorhabditis brenneri]
Length = 376
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 152/182 (83%), Gaps = 3/182 (1%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL+D VN++ + DN+EL+ ++K GQFTLRDMYEQFQNIMKMGPFSQIM MIPGF
Sbjct: 177 MGDIAGLVDMVNDIGIQDNKELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFG 236
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+F++KG+EQES+ RLKR+MT+MDSM+D ELD+ ++LF+K+ R+ RVA+G+G ++E
Sbjct: 237 PEFMTKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQE 296
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKG--GDIT-KNVNQTQMMKLNQQMAKMMDPRVLHQ 200
V+DL++QY KF+ VVKK+G IKGLF G GDI KN+N +MM+LNQQMAKMMDPRVL Q
Sbjct: 297 VRDLLAQYKKFSDVVKKIGSIKGLFNGKNGDINPKNMNPAKMMQLNQQMAKMMDPRVLQQ 356
Query: 201 MG 202
MG
Sbjct: 357 MG 358
>gi|386697113|gb|AFJ22017.1| signal recognition particle protein 54k, partial [Pelzneria sp.
AD974]
Length = 449
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 140/172 (81%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 338 LNMIPGFGPEISKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GV ++V++L+SQYTKFA +VKKMGG+KGLFK GD KNVN QM KLN
Sbjct: 398 GSGVWRRDVQELLSQYTKFAQMVKKMGGMKGLFKPGDFAKNVNPMQMAKLNH 449
>gi|386697115|gb|AFJ22018.1| signal recognition particle protein 54k, partial [Myanoetus sp.
AD832]
Length = 449
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/172 (68%), Positives = 140/172 (81%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYEQ NIMKMGPF+QI
Sbjct: 278 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ES ARLKR+MTIMDSM+D ELD+R+GAKLF++Q RI RVA+
Sbjct: 338 LNMIPGFGPEMSKCTSEAESAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVAR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
G+GV ++V++L+SQYTKFA +VKKMGG+KGLFK GD KNVN QM KLN
Sbjct: 398 GSGVWRRDVQELLSQYTKFAQMVKKMGGMKGLFKPGDFAKNVNPMQMAKLNH 449
>gi|320167917|gb|EFW44816.1| signal recognition particle containing protein [Capsaspora
owczarzaki ATCC 30864]
Length = 512
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 148/179 (82%), Gaps = 2/179 (1%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL++ V +LKLD+N+EL+ K++ G F+LRDMYEQFQNIMKMGPF +IMGMIPGF
Sbjct: 297 MGDIGGLMEVVQDLKLDNNKELLTKLQAGVFSLRDMYEQFQNIMKMGPFGKIMGMIPGFD 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++KGSEQESM RLKR MTIMDSM D ELD+ DG K+F+ Q R RVA+GAG +E
Sbjct: 357 SELITKGSEQESMRRLKRCMTIMDSMTDTELDS-DG-KIFTTQPNRCMRVARGAGAHPRE 414
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V DL++QY KFAA+VK+MGG+KGLFKGGD+++NVN QM +LN QMAKMMDPRVL QMG
Sbjct: 415 VADLLAQYKKFAAMVKQMGGMKGLFKGGDMSRNVNPAQMQQLNAQMAKMMDPRVLKQMG 473
>gi|386697521|gb|AFJ22221.1| signal recognition particle protein 54k, partial [Knemidokoptes sp.
AD845]
Length = 460
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/183 (70%), Positives = 156/183 (85%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGD+EGLIDKVNELKL++NEELIEK+KHG+FT+RDMYEQ N MKMGP +QI
Sbjct: 278 PFISKLLGMGDVEGLIDKVNELKLEENEELIEKLKHGEFTIRDMYEQITNFMKMGPLNQI 337
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + SE ESM+RLKR+MTIMDSM+D ELD+RDGAK+FSKQ RI RV++
Sbjct: 338 LNMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDTELDSRDGAKIFSKQPTRIIRVSR 397
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDP 195
GAGVT+++V++L+SQYTKF AVVKKMGGIKGLFKGGD++KNVN QM KLNQQMAKM+DP
Sbjct: 398 GAGVTQRDVQELLSQYTKFRAVVKKMGGIKGLFKGGDLSKNVNPAQMAKLNQQMAKMIDP 457
Query: 196 RVL 198
R+L
Sbjct: 458 RIL 460
>gi|386697143|gb|AFJ22032.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD545]
Length = 447
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 140/166 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLD+N++LI+K+KHG+FTLRDMYEQ NIMKMGPFSQI
Sbjct: 282 PFISKLLGMGDIEGLIDKVNELKLDENDQLIDKLKHGEFTLRDMYEQLANIMKMGPFSQI 341
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPGF + + SE ESM++LKR+MTIMDSM+DGELD+RDG+KLF KQ R+ RVA+
Sbjct: 342 LNMIPGFGAELSNCTSEAESMSKLKRMMTIMDSMSDGELDSRDGSKLFLKQPTRVARVAR 401
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQ 181
GAG+T EVK+L++Q+TKFAAVVKKMGGIKGLFK GD+ KNVN Q
Sbjct: 402 GAGMTRAEVKELLTQFTKFAAVVKKMGGIKGLFKSGDMMKNVNPNQ 447
>gi|268564306|ref|XP_002647138.1| Hypothetical protein CBG16436 [Caenorhabditis briggsae]
Length = 496
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 151/182 (82%), Gaps = 3/182 (1%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL+D VN++ + DN+EL+ ++K GQFTLRDMYEQFQNIMKMGPFSQIM MIPGF
Sbjct: 297 MGDIAGLVDMVNDIGISDNKELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMVMIPGFG 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+F++KG+EQES+ RLKR+MT+MDSM+D ELD+ ++LF+K+ R+ RVA+G+G ++E
Sbjct: 357 PEFMNKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGCFQQE 416
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKG--GDIT-KNVNQTQMMKLNQQMAKMMDPRVLHQ 200
V+DL+SQY KF+ VVKK+G IKGLF G GDI KN+N +M +LNQQMAKMMDPRVL Q
Sbjct: 417 VRDLLSQYKKFSDVVKKIGSIKGLFNGKNGDINPKNMNPAKMAQLNQQMAKMMDPRVLQQ 476
Query: 201 MG 202
MG
Sbjct: 477 MG 478
>gi|308462623|ref|XP_003093593.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
gi|308249610|gb|EFO93562.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
Length = 496
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 151/182 (82%), Gaps = 3/182 (1%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL+D VN++ + DN+EL+ ++K GQFTLRDMYEQFQNIMKMGPFSQIM MIPGF
Sbjct: 297 MGDIAGLVDMVNDIGIQDNKELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFG 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+F++KG+EQES+ RLKR+MT+MDSM+D ELD+ ++LF+K+ R+ RVA+G+G ++E
Sbjct: 357 PEFMNKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQE 416
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKG--GDIT-KNVNQTQMMKLNQQMAKMMDPRVLHQ 200
V+DL++QY KF+ VVKK+G IKGLF G GDI KN+N +M +LNQQMAKMMDPRVL Q
Sbjct: 417 VRDLLAQYKKFSDVVKKIGSIKGLFNGKNGDINPKNMNPAKMAQLNQQMAKMMDPRVLQQ 476
Query: 201 MG 202
MG
Sbjct: 477 MG 478
>gi|313236259|emb|CBY11581.1| unnamed protein product [Oikopleura dioica]
Length = 520
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/182 (65%), Positives = 149/182 (81%), Gaps = 5/182 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDIEGLIDKVN+LKL+DNE+L + ++ G+FTLRDMYEQFQNI+KMGPF+QIMGMIPGF+
Sbjct: 297 MGDIEGLIDKVNQLKLEDNEDLKKNLQKGRFTLRDMYEQFQNILKMGPFNQIMGMIPGFN 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ---TGRITRVAQGAGVT 140
DF++KG EQES RL++LM IMDSM++ ELD+ DG KLF + R+ RVA+G+G +
Sbjct: 357 -DFMNKGHEQESTNRLRKLMCIMDSMSEDELDSPDGHKLFKNNDDGSRRLRRVARGSGSS 415
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQ 200
KEV +LI QY KFA +VKKMGG+ GLFK GD++KN+N QM ++N MAKMMDPRVL Q
Sbjct: 416 PKEVFELIDQYQKFAQMVKKMGGM-GLFKNGDLSKNMNMQQMNQINGHMAKMMDPRVLQQ 474
Query: 201 MG 202
MG
Sbjct: 475 MG 476
>gi|380030990|ref|XP_003699121.1| PREDICTED: signal recognition particle 54 kDa protein-like [Apis
florea]
Length = 148
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/125 (88%), Positives = 118/125 (94%)
Query: 78 MIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
MIPGFSQDF+SKG+EQESMARLKR+MTIMDSMND ELDNRDGAKLFSKQ GRITRVAQG+
Sbjct: 1 MIPGFSQDFMSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRITRVAQGS 60
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRV 197
GVTEKEVKD+I+QYTKFAAVVKKMGGIKGLFK GD++KNVN QM KLN QMAKMMDPRV
Sbjct: 61 GVTEKEVKDVITQYTKFAAVVKKMGGIKGLFKAGDMSKNVNSIQMAKLNHQMAKMMDPRV 120
Query: 198 LHQMG 202
LHQMG
Sbjct: 121 LHQMG 125
>gi|358342721|dbj|GAA50175.1| signal recognition particle subunit SRP54 [Clonorchis sinensis]
Length = 518
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 143/194 (73%), Gaps = 24/194 (12%)
Query: 31 IDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKG 90
+++V ELKLD+NEEL++K+K G FTLR+MYEQFQNI+K+G FSQ++ IPG QD L+
Sbjct: 304 VERVTELKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDLLA-- 361
Query: 91 SEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQ 150
++QES RLKRLMTIMDSMND ELD+ +GA+LF++Q GR RVA+GAGV++ EVK L++Q
Sbjct: 362 NDQESHKRLKRLMTIMDSMNDYELDSDEGARLFNRQPGRTLRVARGAGVSQAEVKLLLTQ 421
Query: 151 YTKFAAVVKKMGGIKGLFKGGD----------------------ITKNVNQTQMMKLNQQ 188
+TKF VVKKMGGIKGLF+ G +++V+ QM KLNQ
Sbjct: 422 HTKFYMVVKKMGGIKGLFQTGPRAGASGPSGPGGNPPSLSEMAAASRSVSAGQMAKLNQS 481
Query: 189 MAKMMDPRVLHQMG 202
MAK++DPR+LHQMG
Sbjct: 482 MAKVLDPRILHQMG 495
>gi|257205636|emb|CAX82469.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 532
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 141/202 (69%), Gaps = 32/202 (15%)
Query: 31 IDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKG 90
+++V ELKLD+NEEL++K+K G FTLR+MYEQFQNI+K+G FSQ++ IPG QD L+
Sbjct: 304 VERVTELKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDLLA-- 361
Query: 91 SEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQ 150
++QES RLKRLMTIMDSMND ELD+ +G +LF++Q GR RVA+GAGV++ EVK L++Q
Sbjct: 362 NDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVKLLLTQ 421
Query: 151 YTKFAAVVKKMGGIKGLFKGGD------------------------------ITKNVNQT 180
++KF VVKKMGGIKGLF+ G +++V+
Sbjct: 422 HSKFYMVVKKMGGIKGLFQTGPKGGAMGGVAGGAGSGAGGSGNTPSLAEMAAASRSVSAG 481
Query: 181 QMMKLNQQMAKMMDPRVLHQMG 202
QM KLNQ MAK++DPR+L QMG
Sbjct: 482 QMAKLNQSMAKVLDPRILQQMG 503
>gi|326435414|gb|EGD80984.1| signal recognition particle protein [Salpingoeca sp. ATCC 50818]
Length = 523
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 132/179 (73%), Gaps = 2/179 (1%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL+++V+E+ LD ++++E+IK G FT+RDMYEQFQNI K+GPFSQ+M MIPG
Sbjct: 297 MGDVQGLMERVSEIGLDKQKDMMERIKAGVFTMRDMYEQFQNIQKLGPFSQVMSMIPGLG 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
D L K EQ S RLKR M IM SM D ELD+ + AK+F Q R+ RVA+GAGV E
Sbjct: 357 GDLLGKAGEQASSDRLKRFMVIMRSMTDEELDSDNLAKMFQMQPSRVQRVARGAGVHPGE 416
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V+ L+ Q+ KFA +VKKMGG+K LF+G + V+ QM KLNQ MAKMMDPRVL QMG
Sbjct: 417 VEALLQQHKKFAELVKKMGGVKNLFQGN--SDRVSAQQMSKLNQSMAKMMDPRVLKQMG 473
>gi|256082003|ref|XP_002577253.1| signal recognition particle 54 kD protein [Schistosoma mansoni]
gi|353233394|emb|CCD80749.1| putative signal recognition particle 54 kD protein [Schistosoma
mansoni]
Length = 538
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 140/207 (67%), Gaps = 37/207 (17%)
Query: 31 IDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKG 90
+++V ELKLD+NEEL++K+K G FTLR+MYEQFQNI+K+G FSQ++ IPG QD L+
Sbjct: 304 VERVTELKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDLLA-- 361
Query: 91 SEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQ 150
++QES RLKRLMTIMDSMND ELD+ +G +LF++Q GR RVA+GAGV++ EVK L++Q
Sbjct: 362 NDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVKLLLTQ 421
Query: 151 YTKFAAVVKKMGGIKGLFKGGD-----------------------------------ITK 175
+ KF VVKKMGGIKGLF+ G ++
Sbjct: 422 HNKFYMVVKKMGGIKGLFQTGSKSGAMGGIGGGPGGVGSGGGAGGSGNTPSLAEMAAASR 481
Query: 176 NVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+V+ QM KLNQ MAK++DPR+L QMG
Sbjct: 482 SVSAGQMAKLNQSMAKVLDPRILQQMG 508
>gi|349802943|gb|AEQ16944.1| putative signal recognition particle subunit [Pipa carvalhoi]
Length = 118
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/117 (80%), Positives = 110/117 (94%)
Query: 39 LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMAR 98
LDDNE L+EK+KHGQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF QDF+SKG+EQESMAR
Sbjct: 1 LDDNEALLEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGQDFMSKGNEQESMAR 60
Query: 99 LKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFA 155
LK+LMTIMDSMND ELDN DGAKLFSKQ GR+ RVA+G+GV+ ++V++L++QYTKFA
Sbjct: 61 LKKLMTIMDSMNDQELDNTDGAKLFSKQPGRVQRVARGSGVSTRDVQELLAQYTKFA 117
>gi|313218053|emb|CBY41387.1| unnamed protein product [Oikopleura dioica]
Length = 502
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 135/182 (74%), Gaps = 23/182 (12%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDIEGLIDKVN+LKL+DNE+L + ++ G+FTLRDMYEQFQNI+KMGPF+QIMGMIPGF+
Sbjct: 297 MGDIEGLIDKVNQLKLEDNEDLKKNLQKGRFTLRDMYEQFQNILKMGPFNQIMGMIPGFN 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ---TGRITRVAQGAGVT 140
DF++KG EQ+ ELD+ DG KLF + R+ RVA+G+G +
Sbjct: 357 -DFMNKGHEQD------------------ELDSPDGHKLFKNNDDGSRRLRRVARGSGSS 397
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQ 200
KEV +LI QY KFA +VKKMGG+ GLFK GD++KN+N QM ++N MAKMMDPRVL Q
Sbjct: 398 PKEVFELIDQYQKFAQMVKKMGGM-GLFKNGDLSKNMNMQQMNQINGHMAKMMDPRVLQQ 456
Query: 201 MG 202
MG
Sbjct: 457 MG 458
>gi|24159063|pdb|1MFQ|C Chain C, Crystal Structure Analysis Of A Ternary S-Domain Complex
Of Human Signal Recognition Particle
Length = 129
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/117 (79%), Positives = 109/117 (93%)
Query: 52 GQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMND 111
GQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND
Sbjct: 13 GQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMND 72
Query: 112 GELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLF 168
ELD+ DGAK+FSKQ GRI RVA+G+GV+ ++V++L++QYTKFA +VKKMGGIKGLF
Sbjct: 73 QELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLF 129
>gi|449685848|ref|XP_004210996.1| PREDICTED: signal recognition particle 54 kDa protein-like [Hydra
magnipapillata]
Length = 156
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/125 (72%), Positives = 113/125 (90%)
Query: 78 MIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
MIPGFS DF+SKG+EQES+ARLK+LMT+MDSMND ELD+ +GAKLF+KQ R++RVA G+
Sbjct: 1 MIPGFSNDFISKGNEQESVARLKKLMTMMDSMNDTELDSPNGAKLFTKQPSRLSRVAHGS 60
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRV 197
GV+ ++V++L++QY KFA +VKKMGGIKGLFKGGD+ KNVN +QM KLNQQMAKMMDPRV
Sbjct: 61 GVSSRDVQELLTQYQKFAQMVKKMGGIKGLFKGGDMGKNVNPSQMAKLNQQMAKMMDPRV 120
Query: 198 LHQMG 202
LHQ+G
Sbjct: 121 LHQLG 125
>gi|156554455|ref|XP_001604233.1| PREDICTED: signal recognition particle 54 kDa protein-like [Nasonia
vitripennis]
Length = 444
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/107 (87%), Positives = 101/107 (94%)
Query: 96 MARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFA 155
MARLK+LMTIMDSMND ELD+RDGAKLFSKQ GRI RVA+G+GVTEK+VKDLI+QYTKFA
Sbjct: 307 MARLKKLMTIMDSMNDSELDSRDGAKLFSKQPGRIVRVARGSGVTEKDVKDLIAQYTKFA 366
Query: 156 AVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
AVVKKMGGIKGLFKGGD+TKNVN QM KLNQQMAKMMDPRVLHQMG
Sbjct: 367 AVVKKMGGIKGLFKGGDMTKNVNPAQMAKLNQQMAKMMDPRVLHQMG 413
>gi|257216394|emb|CAX82402.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 461
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
Query: 31 IDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKG 90
+++V ELKLD+NEEL++K+K G FTLR+MYEQFQNI+K+G FSQ++ IPG QD L+
Sbjct: 304 VERVTELKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQDLLA-- 361
Query: 91 SEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQ 150
++QES RLKRLMTIMDSMND ELD+ +G +LF++Q GR RVA+GAGV++ EVK L++Q
Sbjct: 362 NDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVKLLLTQ 421
Query: 151 YTKFAAVVKKMGGIKGLFKGG 171
++KF VVKKMGGIKGLF+ G
Sbjct: 422 HSKFYMVVKKMGGIKGLFQTG 442
>gi|402697946|gb|AFQ91160.1| signal recognition particle 54kDa, partial [Chrysemys picta]
Length = 103
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/103 (84%), Positives = 96/103 (93%)
Query: 35 NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQE 94
NELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQE
Sbjct: 1 NELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQE 60
Query: 95 SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
SMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+G+
Sbjct: 61 SMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGS 103
>gi|6435762|pdb|1QB2|A Chain A, Crystal Structure Of The Conserved Subdomain Of Human
Protein Srp54m At 2.1a Resolution: Evidence For The
Mechanism Of Signal Peptide Binding
gi|6435763|pdb|1QB2|B Chain B, Crystal Structure Of The Conserved Subdomain Of Human
Protein Srp54m At 2.1a Resolution: Evidence For The
Mechanism Of Signal Peptide Binding
gi|48425477|pdb|1RY1|W Chain W, Structure Of The Signal Recognition Particle Interacting
With The Elongation-Arrested Ribosome
gi|110590375|pdb|2GO5|W Chain W, Structure Of Signal Recognition Particle Receptor (Sr) In
Complex With Signal Recognition Particle (Srp) And
Ribosome Nascent Chain Complex
Length = 109
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 101/109 (92%)
Query: 53 QFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDG 112
QFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND
Sbjct: 1 QFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQ 60
Query: 113 ELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKM 161
ELD+ DGAK+FSKQ GRI RVA+G+GV+ ++V++L++QYTKFA +VKKM
Sbjct: 61 ELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKM 109
>gi|402697950|gb|AFQ91162.1| signal recognition particle 54kDa, partial [Eretmochelys imbricata]
Length = 103
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/103 (83%), Positives = 94/103 (91%)
Query: 35 NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQE 94
NELKLDDNE LIEK KHGQFTLRDMY QFQNIMKMGPFSQI+GMIPGF DF+SKG+EQE
Sbjct: 1 NELKLDDNEALIEKXKHGQFTLRDMYXQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQE 60
Query: 95 SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
SMARLK+LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+G+
Sbjct: 61 SMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGS 103
>gi|402697942|gb|AFQ91158.1| signal recognition particle 54kDa, partial [Anniella pulchra]
Length = 103
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/103 (82%), Positives = 93/103 (90%)
Query: 35 NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQE 94
NELKLDDNE LIEK KHGQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQE
Sbjct: 1 NELKLDDNEALIEKXKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQE 60
Query: 95 SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
MARLK+LMTIMD MND ELD+ DGAK+FSKQ GRI RVA+G+
Sbjct: 61 XMARLKKLMTIMDXMNDQELDSTDGAKVFSKQPGRIQRVARGS 103
>gi|167534832|ref|XP_001749091.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772515|gb|EDQ86166.1| predicted protein [Monosiga brevicollis MX1]
Length = 722
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 30/208 (14%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GD++GLI++V+EL ++++ EL+++IKHG+FTLRDMYEQF NI KMGPFSQ+MGMIPG S
Sbjct: 470 LGDVQGLIERVSELGIEEDPELMKRIKHGKFTLRDMYEQFLNIQKMGPFSQVMGMIPGLS 529
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
F G+ + R++ +T+M SM D ELD+ AKLF +Q R R+A+GAGV
Sbjct: 530 NVF-GDGNNEVVTKRMQMTLTVMKSMTDFELDHAKAAKLFREQPSRSVRLARGAGVHPSV 588
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGD-----------------------------IT 174
V+ L+ QY KF+ V+KKMGGIK + I
Sbjct: 589 VEQLLQQYGKFSEVIKKMGGIKVSARTASSLCVCVCVCVCVRACFKLFCNFYERALNFIV 648
Query: 175 KNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++Q QM LNQ MAK MDP + MG
Sbjct: 649 HWISQQQMNVLNQAMAKGMDPSIFRSMG 676
>gi|354498655|ref|XP_003511430.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Cricetulus griseus]
Length = 385
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 87/96 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMND 111
+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND
Sbjct: 349 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMND 384
>gi|432937583|ref|XP_004082449.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Oryzias latipes]
Length = 385
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/96 (83%), Positives = 87/96 (90%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLID+VNELKLDDNEELI+K+KHGQFTLRDMYEQFQNIMKMGPF QI
Sbjct: 289 PFISKLLGMGDIEGLIDRVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQI 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMND 111
MGMIPGF DF+SKG+EQESMARLK+LMTIMDSMND
Sbjct: 349 MGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMND 384
>gi|402697960|gb|AFQ91167.1| signal recognition particle 54kDa, partial [Sternotherus carinatus]
Length = 103
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/103 (81%), Positives = 90/103 (87%)
Query: 35 NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQE 94
NELKLDDNE LIEK K GQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQE
Sbjct: 1 NELKLDDNEALIEKXKXGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQE 60
Query: 95 SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
SMARLK+LMTIMDSMND L DGAK+FSKQ GRI RVA G+
Sbjct: 61 SMARLKKLMTIMDSMNDQXLVIXDGAKVFSKQPGRIQRVAXGS 103
>gi|340546121|gb|AEK51859.1| 54kDa signal recognition particle [Heteronotia binoei]
Length = 101
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 80/101 (79%), Positives = 90/101 (89%)
Query: 37 LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESM 96
LKLDDNE IEK+KHGQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQE M
Sbjct: 1 LKLDDNEAXIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQEXM 60
Query: 97 ARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
A J +LMTIMDSMND ELD+ DGAK+FSKQ GRI RVA+G+
Sbjct: 61 AXJXKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGS 101
>gi|402697952|gb|AFQ91163.1| signal recognition particle 54kDa, partial [Geoemyda spengleri]
Length = 99
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 88/99 (88%)
Query: 35 NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQE 94
NELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQE
Sbjct: 1 NELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQE 60
Query: 95 SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
SMARLK+ MTIMDSMND E DGAK+FSKQ GRI RV
Sbjct: 61 SMARLKKXMTIMDSMNDQEXVXTDGAKVFSKQPGRIQRV 99
>gi|402697962|gb|AFQ91168.1| signal recognition particle 54kDa, partial [Sternotherus minor]
Length = 96
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/95 (83%), Positives = 84/95 (88%)
Query: 36 ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQES 95
ELKLDDNE LIEK KHGQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQES
Sbjct: 2 ELKLDDNEALIEKXKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQES 61
Query: 96 MARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRI 130
MARLK+ MTIMDSMND N DGAK+FSKQ GRI
Sbjct: 62 MARLKKXMTIMDSMNDQXXXNTDGAKVFSKQPGRI 96
>gi|209879780|ref|XP_002141330.1| signal recognition particle protein SRP54 [Cryptosporidium muris
RN66]
gi|209556936|gb|EEA06981.1| signal recognition particle protein SRP54, putative
[Cryptosporidium muris RN66]
Length = 497
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 24 MGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL K+NE+ +D E++ +I G FTLRDMYEQFQN++ MG S ++ MIPGF
Sbjct: 297 LGDISGLFAKINEVVPIDKQPEMVNRIVQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGF 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+FL+K EQ + RL+R M IMDSM D ELDN + S + RITRVA G+G
Sbjct: 357 GPNFLAKEDEQAGITRLRRFMVIMDSMTDAELDNTE-----SMISSRITRVAIGSGTNVC 411
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
EV+DL++QY FA +V ++G + GL K GD+ N M Q+M +M+DPR+L Q+G
Sbjct: 412 EVQDLLNQYKTFAKMVGQIGKM-GLGKKGDMGSLKNPLHFM---QKMQRMIDPRMLKQLG 467
>gi|302811179|ref|XP_002987279.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
gi|302815043|ref|XP_002989204.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300143104|gb|EFJ09798.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300144914|gb|EFJ11594.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
Length = 491
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 126/191 (65%), Gaps = 14/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +D++ E+ +D ELI+K+ G FTLR MYEQFQNIM MGP +Q
Sbjct: 289 PFVSRLLGMGDWAGFMDRIQEVVPMDQQPELIQKLTDGNFTLRLMYEQFQNIMSMGPLNQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+M MIPGFS + + KG E+ES A++K+ MT+MDSM ELD+ + KLF+ + R+ RVA
Sbjct: 349 VMSMIPGFSSELMPKGREKESQAKIKKFMTMMDSMTSAELDSTN-PKLFA-EASRVMRVA 406
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDIT---KNVNQTQMMKLNQQMAK 191
+G+G + ++V +++ +Y + A + KM G+K + K GD++ +N+N Q M+K
Sbjct: 407 RGSGRSVRDVTEMLEEYKRLAKLWSKMKGLK-IPKKGDMSAMARNMNA-------QHMSK 458
Query: 192 MMDPRVLHQMG 202
++ P++L QMG
Sbjct: 459 VLPPQMLKQMG 469
>gi|115440231|ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|20160917|dbj|BAB89854.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|21743252|dbj|BAC03250.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|32879776|dbj|BAC79360.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|113533926|dbj|BAF06309.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|215767979|dbj|BAH00208.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619331|gb|EEE55463.1| hypothetical protein OsJ_03626 [Oryza sativa Japonica Group]
Length = 496
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 123/190 (64%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM DGELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSSELMPKGHEKESQAKIKRYMTMMDSMTDGELDSTN-PKLMTE--SRILRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G ++V D++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRPVRDVVDMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNV-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|218189132|gb|EEC71559.1| hypothetical protein OsI_03915 [Oryza sativa Indica Group]
Length = 496
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 123/190 (64%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM DGELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSSELMPKGHEKESQAKIKRYMTMMDSMTDGELDSTN-PKLMTE--SRILRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G ++V D++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRPVRDVVDMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNV-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|356550626|ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 500
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 126/191 (65%), Gaps = 15/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQNI+KMGP SQ
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL ++ R+ R+A
Sbjct: 349 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+GAG +EV +++ +Y + A + KM G+K + K GD +++N+N Q M+K
Sbjct: 406 RGAGRQIREVMEMLEEYKRLAKIWSKMKGLK-IPKKGDMSALSRNMNA-------QHMSK 457
Query: 192 MMDPRVLHQMG 202
++ P++L Q+G
Sbjct: 458 VLPPQMLKQIG 468
>gi|226496107|ref|NP_001142208.1| uncharacterized protein LOC100274376 [Zea mays]
gi|194702286|gb|ACF85227.1| unknown [Zea mays]
gi|194707600|gb|ACF87884.1| unknown [Zea mays]
gi|413952289|gb|AFW84938.1| hypothetical protein ZEAMMB73_989437 [Zea mays]
Length = 496
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 122/190 (64%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWAGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM D ELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTDAELDSTN-PKLMTE--SRIIRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G ++V D++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRPVRDVIDMLEEYKRLAKIWGKMKGLKIPKKGEMSALSRNMN-------VQHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|308080100|ref|NP_001183903.1| uncharacterized protein LOC100502496 [Zea mays]
gi|238015356|gb|ACR38713.1| unknown [Zea mays]
gi|414880280|tpg|DAA57411.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 494
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 124/191 (64%), Gaps = 15/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E + D +L++K+ G F+LR MYEQFQN++KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM D ELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTDAELDSTN-PKLMTE--SRIIRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+G+G ++V D++ +Y + A + KM G+K L K GD +T+N+N QQM+K
Sbjct: 406 RGSGRPVRDVMDMLEEYKRLAKIWGKMKGLK-LQKKGDMSALTRNMNV-------QQMSK 457
Query: 192 MMDPRVLHQMG 202
+ P++L Q+G
Sbjct: 458 ALPPQMLKQIG 468
>gi|356526231|ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 1 [Glycine max]
Length = 495
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 124/190 (65%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQNI+KMGP SQ
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL ++ R+ R+A
Sbjct: 349 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLINE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV +++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRPVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|356526233|ref|XP_003531723.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 2 [Glycine max]
Length = 500
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 124/190 (65%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQNI+KMGP SQ
Sbjct: 294 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQ 353
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL ++ R+ R+A
Sbjct: 354 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLINE--SRMMRIA 410
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV +++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 411 RGSGRPVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKV 463
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 464 LPPQMLKQIG 473
>gi|449468938|ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 495
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 124/190 (65%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MY+QFQN++KMGP +Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG+S D + KG E+ES A+LKR MT+MDSM D ELD+ + KL ++ R+ R+A
Sbjct: 349 VFSMLPGYSADLMPKGREKESQAKLKRYMTMMDSMTDEELDSTN-PKLINE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV +++ +Y + A V KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGHRVQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQILKQIG 468
>gi|168008842|ref|XP_001757115.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691613|gb|EDQ77974.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 281
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 125/186 (67%), Gaps = 15/186 (8%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD G ++K+ + + +D EL++K+ G FTLR MYEQFQNI+KMGP SQ+M MI
Sbjct: 77 LLGMGDWSGFMEKIQDAVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPLSQVMSMI 136
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PGFSQ+F+ KG E+ES A++K+ T+MDSM D ELD+ + KL + RI R+A+G+G
Sbjct: 137 PGFSQEFMPKGREKESQAKIKKFTTMMDSMTDEELDSTN-PKLMTDS--RIYRIARGSGR 193
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAKMMDPR 196
+EV +++ ++ + A + KM G+K + K GD +++N+N Q M+K++ P+
Sbjct: 194 GLREVHEMLEEFKRLAKIWSKMKGLK-IPKKGDMSAMSRNMN-------AQHMSKVLPPQ 245
Query: 197 VLHQMG 202
+L Q+G
Sbjct: 246 MLKQIG 251
>gi|242054557|ref|XP_002456424.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
gi|241928399|gb|EES01544.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
Length = 496
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 122/190 (64%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTEAELDSTN-PKLMTE--SRIIRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G ++V D++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRPVRDVMDMLEEYKRLAKIWGKMKGLKIPKKGEMSALSRNMNV-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|356519296|ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 495
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 124/190 (65%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQN++KMGP SQ
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL ++ R+ R+A
Sbjct: 349 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV +++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRPVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|1711511|sp|P49969.1|SR542_HORVU RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|1020002|gb|AAA79355.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
gi|326510077|dbj|BAJ87255.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL+DK+ + + D EL+ K+ G FTLR +YEQFQN++KMGP Q
Sbjct: 289 PFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+E A++KR MTIMDSM ELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTN-PKLMTE--SRIIRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G ++V D++ +Y + A + KM G+K G D+++N+N QQM K
Sbjct: 406 RGSGRQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLN-------IQQMTKA 458
Query: 193 MDPRVLHQMG 202
+ P+VL QMG
Sbjct: 459 LPPQVLKQMG 468
>gi|350535032|ref|NP_001234428.1| signal recognition particle 54 kDa protein 2 [Solanum lycopersicum]
gi|1711512|sp|P49972.1|SR542_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|556902|emb|CAA84288.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 499
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 120/190 (63%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E ES A++KR MT+MDSM + ELD+ + KL + RI R+A
Sbjct: 349 VFSMLPGFSAELMPKGRENESQAKIKRYMTMMDSMTNEELDSSN-PKLMT--DSRIMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G EV D++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRQVHEVMDMMEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|1711508|sp|P49968.1|SR541_HORVU RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|1020000|gb|AAA79354.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL+DK+ + + D EL+ K+ G FTLR +YEQFQN++KMGP Q
Sbjct: 289 PFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+E A++KR MTIMDSM ELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTN-PKLMTE--SRIIRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G ++V D++ +Y + A + KM G+K G D+++N+N QQM K
Sbjct: 406 RGSGRQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLN-------IQQMTKA 458
Query: 193 MDPRVLHQMG 202
+ P+VL QMG
Sbjct: 459 LPPQVLKQMG 468
>gi|356554903|ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 499
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 124/191 (64%), Gaps = 15/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK+ E+ +D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIQEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL ++ R+ R+A
Sbjct: 349 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+GAG +EV +++ +Y + A + KM G+K + K GD +++N+N Q M+K
Sbjct: 406 RGAGRQIREVMEMLEEYKRLAKIWSKMKGLK-IPKKGDMSALSRNMNA-------QHMSK 457
Query: 192 MMDPRVLHQMG 202
++ P++L Q+G
Sbjct: 458 VLPPQMLKQIG 468
>gi|357133062|ref|XP_003568147.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 498
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 122/190 (64%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL+DK+ + + D + EL++K+ G FTLR +YEQFQN++KMGP Q
Sbjct: 289 PFVKRLLGMGDLSGLMDKIQDVMPADQHPELLQKLTEGTFTLRLLYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+E A++KR MTIMDSM + ELD+ + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTNAELDSTN-PKLMTES--RIVRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G ++V D++ +Y + A + KM G+K G D+++N+N QQ+ K
Sbjct: 406 RGSGRQIRDVMDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNM-------QQIQKA 458
Query: 193 MDPRVLHQMG 202
+ P+VL QMG
Sbjct: 459 LPPQVLKQMG 468
>gi|255553241|ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
gi|223543295|gb|EEF44827.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
Length = 497
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 121/190 (63%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL + RI R+A
Sbjct: 349 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV ++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRQVREVMEMFEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|118487996|gb|ABK95819.1| unknown [Populus trichocarpa]
Length = 495
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 122/190 (64%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQN++KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL + R+ R+A
Sbjct: 349 VFSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTNEELDSSN-PKLLN--DSRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+GAG ++V +++ +Y + A V KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGAGRPIRDVMEMLEEYKRLAKVWSKMKGLKIPKKGEMSSLSRNMNA-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|224059270|ref|XP_002299799.1| predicted protein [Populus trichocarpa]
gi|222847057|gb|EEE84604.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 122/190 (64%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQN++KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL + R+ R+A
Sbjct: 349 VFSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTNEELDSSN-PKLLN--DSRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+GAG ++V +++ +Y + A V KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGAGRPIRDVMEILEEYKRLAKVWSKMKGLKIPKKGEMSSLSRNMNA-------QHMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|323454201|gb|EGB10071.1| hypothetical protein AURANDRAFT_36724 [Aureococcus anophagefferens]
Length = 497
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 116/187 (62%), Gaps = 20/187 (10%)
Query: 24 MGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGD+ GL++++ + DD + EL+EK GQFTLRDMYEQF+N+MK+GP S++M MIPG
Sbjct: 297 MGDMRGLVEQIKDTIGDDKQPELMEKFSKGQFTLRDMYEQFENVMKLGPLSKVMAMIPGI 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKL-FSKQTGRITRVAQGAGVTE 141
+ G ES RLKR M +MDSM D ELD AK+ +K RI RVA+G+G
Sbjct: 357 PS--MMGGEGDESNNRLKRFMYMMDSMTDDELD----AKVDLNKSASRIERVARGSGCHP 410
Query: 142 KEVKDLISQYTKFAAVVKKMGGIKGLFKGGDIT------KNVNQTQMMKLNQQMAKMMDP 195
EV+ L+ + +F +VV KMG GL KGGD +N NQ QQ+ K MDP
Sbjct: 411 MEVQMLLKCHKQFESVVSKMGK-SGLMKGGDAAMAKQMQRNPNQVM-----QQLHKAMDP 464
Query: 196 RVLHQMG 202
R+L QMG
Sbjct: 465 RMLQQMG 471
>gi|357468165|ref|XP_003604367.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355505422|gb|AES86564.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 496
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 126/191 (65%), Gaps = 15/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + GD+ G ++K++E+ +D EL+ K++ G FTLR MYEQFQNI+KMGP S+
Sbjct: 289 PFVSRLLGQGDLSGFMNKIHEVVPMDQQPELLNKLQEGTFTLRIMYEQFQNILKMGPMSE 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + L KG +Q+S A++KR MT+MDSM + ELD+ + KL ++ R+ R+A
Sbjct: 349 VFSMLPGFSNELLPKGKDQDSQAKIKRYMTMMDSMTNEELDSSN-PKLMNE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+G+G +EV +++ +Y + A + KM G+K + K GD +T+N+N T M+K
Sbjct: 406 RGSGRQVREVMEMMEEYKRLAKIWSKMKGLK-IPKKGDMNSMTRNMNAT-------HMSK 457
Query: 192 MMDPRVLHQMG 202
++ P++L Q+G
Sbjct: 458 ILPPQMLKQIG 468
>gi|149051248|gb|EDM03421.1| signal recognition particle 54 [Rattus norvegicus]
Length = 278
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 83/90 (92%)
Query: 113 ELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD 172
ELD+ DGAK+FSKQ GRI RVA+G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD
Sbjct: 160 ELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGD 219
Query: 173 ITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++KNV+Q+QM KLNQQMAKMMDPRVLH MG
Sbjct: 220 MSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 249
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKH------------------------ 51
P + MGDIEGLIDKVNELKLDDNE LIEK+KH
Sbjct: 124 PFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHELDSTDGAKVFSKQPGRIQRVARG 183
Query: 52 GQFTLRDMYEQFQNIMKMGPFSQIMGMIPG-FSQDFLSKGSEQESMARLKRLMTIM 106
+ RD+ E K + MG I G F +SK Q MA+L + M M
Sbjct: 184 SGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKM 239
>gi|148704788|gb|EDL36735.1| signal recognition particle 54, isoform CRA_a [Mus musculus]
Length = 325
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 83/90 (92%)
Query: 113 ELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD 172
ELD+ DGAK+FSKQ GRI RVA+G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD
Sbjct: 207 ELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGD 266
Query: 173 ITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++KNV+Q+QM KLNQQMAKMMDPRVLH MG
Sbjct: 267 MSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 296
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 51/116 (43%), Gaps = 25/116 (21%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKH------------------------ 51
P + MGDIEGLIDKVNELKLDDN+ LIEK KH
Sbjct: 171 PFISKLLGMGDIEGLIDKVNELKLDDNKALIEKWKHELDSTDGAKVFSKQPGRIQRVARG 230
Query: 52 GQFTLRDMYEQFQNIMKMGPFSQIMGMIPG-FSQDFLSKGSEQESMARLKRLMTIM 106
+ RD+ E K + MG I G F +SK Q MA+L + M M
Sbjct: 231 SGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKM 286
>gi|148704789|gb|EDL36736.1| signal recognition particle 54, isoform CRA_b [Mus musculus]
Length = 286
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 83/90 (92%)
Query: 113 ELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD 172
ELD+ DGAK+FSKQ GRI RVA+G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD
Sbjct: 168 ELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGD 227
Query: 173 ITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++KNV+Q+QM KLNQQMAKMMDPRVLH MG
Sbjct: 228 MSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 257
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 51/116 (43%), Gaps = 25/116 (21%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKH------------------------ 51
P + MGDIEGLIDKVNELKLDDN+ LIEK KH
Sbjct: 132 PFISKLLGMGDIEGLIDKVNELKLDDNKALIEKWKHELDSTDGAKVFSKQPGRIQRVARG 191
Query: 52 GQFTLRDMYEQFQNIMKMGPFSQIMGMIPG-FSQDFLSKGSEQESMARLKRLMTIM 106
+ RD+ E K + MG I G F +SK Q MA+L + M M
Sbjct: 192 SGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKM 247
>gi|515681|gb|AAA66200.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 123/191 (64%), Gaps = 15/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK+ E+ D + EL+EK+ G FTLR MY+QFQNI+ MGP +
Sbjct: 289 PFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKE 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG S + + KG E+ES A++KR MT+MDSM + ELD+ G K+F++ R+ R+A
Sbjct: 349 VFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDS-SGPKVFNES--RMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+G+G +EV +++ +Y + A + KM G+K + K GD +++N+N Q M+K
Sbjct: 406 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKNGDMSALSRNMNA-------QHMSK 457
Query: 192 MMDPRVLHQMG 202
++ P++L Q+G
Sbjct: 458 VLPPQMLKQIG 468
>gi|225442910|ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Vitis
vinifera]
Length = 495
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 121/190 (63%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDTSN-PKLMNE--SRIMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV +++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKI 458
Query: 193 MDPRVLHQMG 202
+ ++L Q+G
Sbjct: 459 IPQQMLKQIG 468
>gi|402697954|gb|AFQ91164.1| signal recognition particle 54kDa, partial [Hardella thurjii]
Length = 78
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/77 (88%), Positives = 73/77 (94%)
Query: 35 NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQE 94
NELKLDDNE LIEK+KHGQFTLRDMYEQFQNIMKMGPFSQI+GMIPGF DF+SKG+EQE
Sbjct: 1 NELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQE 60
Query: 95 SMARLKRLMTIMDSMND 111
SMARLK+LMTIM SMND
Sbjct: 61 SMARLKKLMTIMXSMND 77
>gi|354503488|ref|XP_003513813.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Cricetulus griseus]
Length = 118
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 82/89 (92%)
Query: 114 LDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI 173
LD+ DGAK+FSKQ GRI RVA+G+GV+ ++V++L++QYTKFA +VKKMGGIKGLFKGGD+
Sbjct: 1 LDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM 60
Query: 174 TKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+KNV+Q+QM KLNQQMAKMMDPRVLH MG
Sbjct: 61 SKNVSQSQMAKLNQQMAKMMDPRVLHHMG 89
>gi|18402407|ref|NP_564535.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|21542461|sp|P49967.2|SR543_ARATH RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|17386102|gb|AAL38597.1|AF446864_1 At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15450461|gb|AAK96524.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15810010|gb|AAL06932.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|332194242|gb|AEE32363.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 495
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 123/191 (64%), Gaps = 15/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK+ E+ D + EL+EK+ G FTLR MY+QFQNI+ MGP +
Sbjct: 289 PFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKE 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG S + + KG E+ES A++KR MT+MDSM + ELD+ + K+F++ R+ R+A
Sbjct: 349 VFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSN-PKVFNE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+G+G +EV +++ +Y + A + KM G+K + K GD +++N+N Q M+K
Sbjct: 406 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKNGDMSALSRNMNA-------QHMSK 457
Query: 192 MMDPRVLHQMG 202
++ P++L Q+G
Sbjct: 458 VLPPQMLKQIG 468
>gi|76157399|gb|AAX28336.2| SJCHGC03486 protein [Schistosoma japonicum]
Length = 186
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 32/159 (20%)
Query: 74 QIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
Q++ IPG QD L+ ++QES RLKRLMTIMDSMND ELD+ +G +LF++Q GR RV
Sbjct: 1 QVLSAIPGLGQDLLA--NDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRV 58
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD--------------------- 172
A+GAGV++ EVK L++Q++KF VVKKMGGIKGLF+ G
Sbjct: 59 ARGAGVSQAEVKLLLTQHSKFYMVVKKMGGIKGLFQTGPKGGAMGGVAGGAGSGAGGSGN 118
Query: 173 ---------ITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+++V+ QM KLNQ MAK++DPR+L QMG
Sbjct: 119 TPSLAEMAAASRSVSAGQMAKLNQSMAKVLDPRILQQMG 157
>gi|11094805|gb|AAG29734.1|AC084414_2 signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
Length = 522
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 123/191 (64%), Gaps = 15/191 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK+ E+ D + EL+EK+ G FTLR MY+QFQNI+ MGP +
Sbjct: 316 PFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKE 375
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG S + + KG E+ES A++KR MT+MDSM + ELD+ + K+F++ R+ R+A
Sbjct: 376 VFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSN-PKVFNES--RMMRIA 432
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+G+G +EV +++ +Y + A + KM G+K + K GD +++N+N Q M+K
Sbjct: 433 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKNGDMSALSRNMNA-------QHMSK 484
Query: 192 MMDPRVLHQMG 202
++ P++L Q+G
Sbjct: 485 VLPPQMLKQIG 495
>gi|303291107|ref|XP_003064840.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226453866|gb|EEH51174.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 513
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 115/189 (60%), Gaps = 9/189 (4%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + +GD G IDK+ + + D EL++K+ GQFT+R +YEQF NI KMGP S
Sbjct: 298 PFVSRLLGLGDWTGFIDKIADVIPADQQPELLDKLAQGQFTMRILYEQFANIQKMGPMSA 357
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+M MIPGF D + KG E++S A++KR+M +MDSM D ELD KL + R+ R+
Sbjct: 358 VMSMIPGFGNDVMPKGQEKQSQAKIKRMMCMMDSMTDEELDTTS-LKLL-QDPKRMERIG 415
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN-QQMAKMM 193
+GAG + +V +LI +Y + A ++ KM G+K KGG Q+Q + N QMA+ +
Sbjct: 416 RGAGRSPMDVVELIEEYKRLAKMMGKMKGLKAPKKGG-----YGQSQALNQNLAQMAQAI 470
Query: 194 DPRVLHQMG 202
P +L QMG
Sbjct: 471 PPGMLKQMG 479
>gi|224139052|ref|XP_002322968.1| predicted protein [Populus trichocarpa]
gi|222867598|gb|EEF04729.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 120/190 (63%), Gaps = 15/190 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQN++KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTN---EGNSNPKLMNES--RIMRIA 403
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G + ++V +++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 404 RGSGRSVRDVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKV 456
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 457 LPPQMLKQIG 466
>gi|428185212|gb|EKX54065.1| hypothetical protein GUITHDRAFT_159167 [Guillardia theta CCMP2712]
Length = 494
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 111/175 (63%), Gaps = 12/175 (6%)
Query: 31 IDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKG 90
++ + + LD EL +K+ G FTLRDMYEQFQN+MKMGP ++M MIPG S ++KG
Sbjct: 304 MNAIKDAGLDKQPELYQKLSQGVFTLRDMYEQFQNVMKMGPIGKVMSMIPGMSA-LMTKG 362
Query: 91 SEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQ 150
E ES R K+ MTIMDSM D ELD + K+F+ R+ R+AQG+G ++V +LI +
Sbjct: 363 REHESQERFKKFMTIMDSMTDDELDTENVNKIFTDT--RVFRIAQGSGSHPQQVWELIEE 420
Query: 151 YTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+ +F ++ KM +K + K G+ +T+N Q QQM K +DPR+L Q+G
Sbjct: 421 FKRFQKMIAKMKHLK-IGKNGEMPQMTRNPQQAM-----QQMGKCLDPRMLKQIG 469
>gi|307105722|gb|EFN53970.1| hypothetical protein CHLNCDRAFT_31879 [Chlorella variabilis]
Length = 490
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 6/180 (3%)
Query: 25 GDIEGLIDKVNEL--KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
GD IDKV ++ + D +ELI+KI G+FTLR MYEQF NIMKMGP Q+M MIPGF
Sbjct: 299 GDWGSFIDKVKDVIPEEDAQQELIDKISKGEFTLRIMYEQFANIMKMGPMGQVMSMIPGF 358
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + GSE+ES A++KR MTIMDSM + ELD+ KL +Q+ RI R A+G+G + +
Sbjct: 359 SNALMQPGSEKESQAKIKRYMTIMDSMTEKELDS-SSTKLLGEQS-RILRWARGSGSSVQ 416
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+V L+ +Y + A V +KG+ ++ ++N M + QM++M+ P +L MG
Sbjct: 417 DVLLLLEEYKRLAKVFST--AMKGMKLPKNMKGDINPRNMQQNIAQMSRMLPPHMLKMMG 474
>gi|399218124|emb|CCF75011.1| unnamed protein product [Babesia microti strain RI]
Length = 494
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 112/181 (61%), Gaps = 13/181 (7%)
Query: 25 GDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GDI GLI+ E+ ++ N E IE+I G+F+LRDMY+QFQN++KMGP Q+M MIPG S
Sbjct: 296 GDINGLINTFKEVVENNGNNESIERISKGKFSLRDMYDQFQNVLKMGPMGQVMSMIPGIS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQT--GRITRVAQGAGVTE 141
+ + KG EQE +AR+KR M IMDSM D ELD KQ R R+A+G+G T
Sbjct: 356 SNIIGKGQEQEGVARIKRFMVIMDSMTDEELD-------CEKQITDSRSMRIARGSGCTI 408
Query: 142 KEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
E+K LI Q+ +V KMG + GL K + + Q ++ +M M+DPR+L QM
Sbjct: 409 FEIKALIEQHKLLHKMVGKMGKM-GLNKESAMQSVMRNPQ--QIVSRMQNMIDPRLLKQM 465
Query: 202 G 202
G
Sbjct: 466 G 466
>gi|301120250|ref|XP_002907852.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
gi|262102883|gb|EEY60935.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
Length = 511
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 28/209 (13%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQF 63
H+ +F + + MGDI GL+++V LD+ EE++EK + G FTLRDMY+QF
Sbjct: 278 HFADFESFNAQSFVSRLMGMGDIRGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMYKQF 337
Query: 64 QNIMKMGPFSQIMGMIPGFSQDFLS----KGSEQESMARLKRLMTIMDSMNDGELDNRDG 119
Q++MKMGP S++M MIPG Q G E+E+ RL+R + +MDSM D EL DG
Sbjct: 338 QSVMKMGPLSKVMSMIPGLPQGMSEMMNMGGGEEEASKRLRRFLFMMDSMTDAEL---DG 394
Query: 120 AKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD------I 173
A S+ R TRVA+G+G EV+ L+ + +FA VV +MG GL K GD +
Sbjct: 395 AVPLSE--SRQTRVARGSGCQLYEVEFLLKCHKQFATVVSRMGK-SGLMKTGDAALGKQM 451
Query: 174 TKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+N N + QQ++K+MDP+++ QMG
Sbjct: 452 ARNPN-----AVMQQLSKVMDPKMMAQMG 475
>gi|452824083|gb|EME31088.1| signal recognition particle subunit SRP54 [Galdieria sulphuraria]
Length = 482
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 120/179 (67%), Gaps = 11/179 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GDI G ++ V E +D N +++++I+ G TLRD+Y+QFQ+++KMGP +++ M PG
Sbjct: 297 LGDISGFVNAVKEAGVDQNPDILKRIQEGVLTLRDLYDQFQSVLKMGPMGKVLSMFPGM- 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
QD + KG E+E R+K+ ++IM+SM D ELDN K+ Q+ R+ R+ +G+G K+
Sbjct: 356 QDLIPKGKEREGTLRVKKFLSIMNSMTDDELDN---PKVQFNQS-RMIRIGRGSGRDVKD 411
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V+DL+++Y + + +V ++G K L K GD + Q Q + QQ+++MMDP++L QMG
Sbjct: 412 VEDLLAEYKRLSKLVSRVGKNKAL-KTGDFS----QLQ-RNMPQQLSRMMDPKMLQQMG 464
>gi|1711509|sp|P49971.1|SR541_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|556900|emb|CAA84275.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 496
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 121/190 (63%), Gaps = 14/190 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL++K+ ++ +D EL++K+ G FTLR MYEQFQ+++KMGP
Sbjct: 290 PFVSRLLGMGDLSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG- 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + +G E+ES A+ KR MT+MDSM D ELD+ + K+ ++ RI R+A
Sbjct: 349 VFSMLPGFSAEMMPQGREKESQAKFKRYMTMMDSMTDEELDSTN-PKILTE--SRIMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G EV +++ +Y + A + KM G+K KG +++N+N Q M+K+
Sbjct: 406 RGSGRLVHEVMEMLEEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNA-------QNMSKV 458
Query: 193 MDPRVLHQMG 202
+ P++L Q+G
Sbjct: 459 LPPQMLKQIG 468
>gi|348677486|gb|EGZ17303.1| hypothetical protein PHYSODRAFT_360478 [Phytophthora sojae]
Length = 511
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 28/209 (13%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQF 63
H+ +F + + MGDI GL+++V LD+ EE++EK + G FTLRDMY+QF
Sbjct: 278 HFADFESFNAQSFVSRLMGMGDIRGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMYKQF 337
Query: 64 QNIMKMGPFSQIMGMIPGFSQDFLS----KGSEQESMARLKRLMTIMDSMNDGELDNRDG 119
Q++MKMGP S++M MIPG Q G E+E+ RL+R + +MDSM D ELD
Sbjct: 338 QSVMKMGPLSKVMSMIPGLPQGMSEMMNMGGGEEEASKRLRRFLFMMDSMTDAELDG--- 394
Query: 120 AKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD------I 173
+ R TRVA+G+G EV+ L+ + +FA VV +MG GL K GD +
Sbjct: 395 --IVPLSESRQTRVARGSGCQLYEVEFLLKCHKQFATVVSRMGK-SGLMKTGDAALGKQM 451
Query: 174 TKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+N N + QQ++K+MDP+++ QMG
Sbjct: 452 ARNPN-----AVMQQLSKVMDPKMMAQMG 475
>gi|1711514|sp|P49970.1|SR543_HORVU RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|1020004|gb|AAA79356.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 493
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 113/190 (59%), Gaps = 16/190 (8%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + GD+ GLIDK+ + D EL+ K+ G FTLR +YEQFQN++KMGP SQ
Sbjct: 288 PFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQ 347
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
I M+PGFS + + KG E++S + KR MTIMDSM ELD+ + KL ++ RI RVA
Sbjct: 348 IFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKLMTES--RIIRVA 404
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN--QQMAKM 192
+G+G K+V +++ +Y + A + K +++K + Q M Q+M K+
Sbjct: 405 RGSGRKVKDVMEMLEEYKRLAKMWSKR----------NVSKLIPQNGKMSAQAIQKMLKV 454
Query: 193 MDPRVLHQMG 202
M P+V+ QMG
Sbjct: 455 MPPQVVQQMG 464
>gi|326519590|dbj|BAK00168.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 12/188 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + GD+ GLIDK+ + D EL+ K+ G FTLR +YEQFQN++KMGP SQ
Sbjct: 136 PFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQ 195
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
I M+PGFS + + KG E++S + KR MTIMDSM ELD+ + KL ++ R RVA
Sbjct: 196 IFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKLMTE--SRTIRVA 252
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
+G+G K+V +++ +Y + A + K+ K + G ++ Q+M K+M
Sbjct: 253 RGSGRKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA--------IQKMLKVMP 304
Query: 195 PRVLHQMG 202
P+V+ QMG
Sbjct: 305 PQVVQQMG 312
>gi|297852530|ref|XP_002894146.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297852532|ref|XP_002894147.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339988|gb|EFH70405.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339989|gb|EFH70406.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 496
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 122/192 (63%), Gaps = 16/192 (8%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK+ E+ D + EL+EK+ G FTLR MY+ FQNI+ MGP +
Sbjct: 289 PFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDLFQNILNMGPLKE 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG S + + KG E+ES A++KR MT+MDSM + ELD+ + K+F++ R+ R+A
Sbjct: 349 VFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSN-PKVFNE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTK-FAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMA 190
+G+G +EV +++ +Y + A + KM G+K + K GD +++N+N Q M+
Sbjct: 406 RGSGRQVREVMEMLEEYKRLLAKIWSKMKGLK-IPKNGDMSALSRNMNA-------QHMS 457
Query: 191 KMMDPRVLHQMG 202
K++ P++L Q+G
Sbjct: 458 KVLPPQMLKQIG 469
>gi|294950295|ref|XP_002786558.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239900850|gb|EER18354.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 533
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 115/186 (61%), Gaps = 19/186 (10%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI+GL+ + E + LD +L+ +++ GQF+LRD+ EQF +M+MGP S++M MIPG
Sbjct: 298 LGDIKGLMSTIGEAMPLDKQGDLMARMQSGQFSLRDLREQFGTVMRMGPLSKVMSMIPGM 357
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
L G+EQE + ++K +T+MDSM D EL DG + F RI RVA+G+G
Sbjct: 358 QSSMLPPGAEQEGVKKMKAYLTMMDSMTDKEL---DGDQDFCGSHSRILRVARGSGHAVG 414
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGD------ITKNVNQTQMMKLNQQMAKMMDPR 196
EV+ L+ +Y K++ +V KMG + K GD + +N NQ + Q M KM+DP+
Sbjct: 415 EVETLVEEYRKYSKMVSKMGKM----KLGDPRTMQQMMRNPNQ-----MMQNMGKMIDPK 465
Query: 197 VLHQMG 202
+L QMG
Sbjct: 466 MLKQMG 471
>gi|294944803|ref|XP_002784438.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239897472|gb|EER16234.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 528
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 116/186 (62%), Gaps = 19/186 (10%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI+GL+ + E + L+ +++ +++ GQF+LRD+ EQF +M+MGP S++M MIPG
Sbjct: 298 LGDIKGLMSTIGEAMPLEKQGDMMARMQSGQFSLRDLREQFGTVMRMGPLSKVMSMIPGM 357
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
L G+EQE + ++K +T+MDSM D EL DG + F RI RVA+G+G +
Sbjct: 358 QSSMLPPGAEQEGVKKMKAYLTMMDSMTDKEL---DGEQDFCGSNSRIVRVAKGSGHAVR 414
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGD------ITKNVNQTQMMKLNQQMAKMMDPR 196
EV+ L+ +Y K++ +V KMG + K GD + +N NQ + Q M KM+DP+
Sbjct: 415 EVEMLVEEYRKYSKMVSKMGKM----KLGDPRTMQQMMRNPNQ-----MMQNMGKMIDPK 465
Query: 197 VLHQMG 202
+L QMG
Sbjct: 466 MLKQMG 471
>gi|71033463|ref|XP_766373.1| signal recognition particle 54 kDa protein [Theileria parva strain
Muguga]
gi|68353330|gb|EAN34090.1| signal recognition particle 54 kDa protein, putative [Theileria
parva]
Length = 495
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 15/182 (8%)
Query: 25 GDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GDI GLI+ + + + LDD +L+++I +FT+RDMY+QFQN++KM P ++M M+PG
Sbjct: 298 GDINGLINTLKDVINLDDKPDLLDRIASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIP 357
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ L G EQE + R+KR M IMDSM D ELD RI R+A+G+G + E
Sbjct: 358 PELLQAGREQEGVDRIKRFMIIMDSMTDEELDCEKPL-----NGSRIMRIAKGSGSSPHE 412
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGG---DITKNVNQTQMMKLNQQMAKMMDPRVLHQ 200
+ LI Q+ +V MG + GL K +I +N NQ L +M M+DPR+L+Q
Sbjct: 413 ISFLIDQHKTLQKMVGSMGKM-GLNKDNAMQNIMRNPNQ-----LLNKMQTMIDPRLLNQ 466
Query: 201 MG 202
MG
Sbjct: 467 MG 468
>gi|402697956|gb|AFQ91165.1| signal recognition particle 54kDa, partial [Malaclemys terrapin]
Length = 77
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/77 (80%), Positives = 71/77 (92%)
Query: 61 EQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGA 120
EQFQBIMKMGPFSQI+GMIPGF DF+SKG+EQESMARLK+LMTIMDSMND ELD+ DGA
Sbjct: 1 EQFQBIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGA 60
Query: 121 KLFSKQTGRITRVAQGA 137
K+FSKQ GRI RVA+G+
Sbjct: 61 KVFSKQPGRIQRVARGS 77
>gi|15239909|ref|NP_199761.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
gi|341942066|sp|P49966.2|SR542_ARATH RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|10177616|dbj|BAB10763.1| SRP54 (signal recognition particle 54 KDa) protein [Arabidopsis
thaliana]
gi|332008438|gb|AED95821.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
Length = 497
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 121/190 (63%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + GD+ G ++K+ E+ D + EL+E + HG+FTLR MY+QFQN++ MGP +
Sbjct: 291 PFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKE 350
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG + + +G E+ES A++KR MT+MDSM + ELD+ + K+F++ RI R+A
Sbjct: 351 VFSMLPGMRAEMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSN-PKVFNE--SRIMRIA 407
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV +++ +Y + + K+ G+K L KG ++KN N +QQ++K+
Sbjct: 408 RGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKN-------SQQLSKV 460
Query: 193 MDPRVLHQMG 202
+ ++L Q+G
Sbjct: 461 LPAQMLKQIG 470
>gi|357131064|ref|XP_003567163.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 499
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G ++K++E+ D E ++K+ FTLR MYEQFQNI MGP SQ
Sbjct: 289 PFVSRLLGMGDWSGFMNKIHEVVPADQQPEFLQKLNQKIFTLRLMYEQFQNIRNMGPISQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
++ M+ GF + + +G EQES A++KR MTIMDSM D ELD+ + L RI R+A
Sbjct: 349 VLSMLRGFRAELMPQGHEQESQAKIKRYMTIMDSMTDAELDSPN---LKFMNESRIIRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
+G+G ++V D++ +Y + A + M IK K GD V + QQ+ +
Sbjct: 406 RGSGRPVRDVLDMLEEYKRLAKICISMSNIKP-HKKGDKRPVVRNNNI----QQIINALP 460
Query: 195 PRVLHQMG 202
P+VL Q+G
Sbjct: 461 PQVLKQIG 468
>gi|515679|gb|AAA66199.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 120/190 (63%), Gaps = 13/190 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + GD+ G ++K+ E+ D + EL+E + HG+FTLR MY+QFQN++ MGP +
Sbjct: 289 PFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKE 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG + + +G E+ES A +KR MT+MDSM + ELD+ + K+F++ RI R+A
Sbjct: 349 VFSMLPGMRAEMMPEGHEKESQAEIKRYMTMMDSMTNEELDSSN-PKVFNE--SRIMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKM 192
+G+G +EV +++ +Y + + K+ G+K L KG ++KN N +QQ++K+
Sbjct: 406 RGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKN-------SQQLSKV 458
Query: 193 MDPRVLHQMG 202
+ ++L Q+G
Sbjct: 459 LPAQMLKQIG 468
>gi|115464807|ref|NP_001056003.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|33235565|dbj|BAC80140.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|48475202|gb|AAT44271.1| putative signal recognition particle 54 KD protein (SRP54) [Oryza
sativa Japonica Group]
gi|113579554|dbj|BAF17917.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|215697189|dbj|BAG91183.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632180|gb|EEE64312.1| hypothetical protein OsJ_19149 [Oryza sativa Japonica Group]
Length = 483
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 97/147 (65%), Gaps = 4/147 (2%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL++K+ + + D EL++++ G FTLR YE FQN++ MGP Q
Sbjct: 289 PFVSRLLGMGDLSGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYELFQNLLNMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
++ MIPGF + + KG ++ES A++KR MTIMDSM + ELD+ + KL S+ RI RVA
Sbjct: 349 VLSMIPGFRSELMPKGHDKESQAKIKRYMTIMDSMTNAELDSTN-PKLMSE--SRIKRVA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G T K+V D++ +Y + A V K+
Sbjct: 406 RGSGRTMKDVTDMLEEYKRIAKVCSKL 432
>gi|84998408|ref|XP_953925.1| signal recognition particle 54kDa protein 2 [Theileria annulata]
gi|65304923|emb|CAI73248.1| signal recognition particle 54kDa protein 2, putative [Theileria
annulata]
Length = 495
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 109/182 (59%), Gaps = 15/182 (8%)
Query: 25 GDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GDI GLI+ + + + L+D +L+++I +FT+RDMY+QFQN++KM P ++M M+PG
Sbjct: 298 GDINGLINTLKDVINLEDKPDLLDRIASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIP 357
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ L G EQE + R+KR M IMDSM D ELD RI R+A+G+G + E
Sbjct: 358 PELLQAGREQEGVDRIKRFMIIMDSMTDEELDCEKPL-----NGTRIMRIAKGSGSSPHE 412
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGG---DITKNVNQTQMMKLNQQMAKMMDPRVLHQ 200
+ LI Q+ +V MG + GL K +I +N NQ L +M M+DPR+L+Q
Sbjct: 413 INFLIDQHKTLQKMVGSMGKM-GLNKDNAMQNIMRNPNQ-----LLNKMQSMIDPRLLNQ 466
Query: 201 MG 202
MG
Sbjct: 467 MG 468
>gi|403221209|dbj|BAM39342.1| signal recognition particle protein 2 [Theileria orientalis strain
Shintoku]
Length = 495
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 112/182 (61%), Gaps = 15/182 (8%)
Query: 25 GDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GDI GLI+ + + + L+D +L++++ +FT+RDMY+QFQN++KM P ++M M+PG
Sbjct: 298 GDINGLINTLKDVINLEDKPDLLDRLASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIP 357
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ L G EQE + R+KR M IMDSM D ELD K F+ + R+ R+A+G+G + +
Sbjct: 358 PELLQAGREQEGVDRIKRFMIIMDSMTDEELDCE---KPFN--SSRVLRIAKGSGTSPND 412
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGG---DITKNVNQTQMMKLNQQMAKMMDPRVLHQ 200
+ L+ Q+ +V MG + GL K ++ +N NQ L +M MMDP++L Q
Sbjct: 413 INVLLEQHKLLQKMVGSMGKM-GLTKDNAVQNLMRNPNQ-----LMNKMQSMMDPKILQQ 466
Query: 201 MG 202
MG
Sbjct: 467 MG 468
>gi|413945975|gb|AFW78624.1| hypothetical protein ZEAMMB73_996048 [Zea mays]
Length = 482
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 115/188 (61%), Gaps = 14/188 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL++K+ E D+ + ++++K+ G FTLR +YE FQN+ ++GP Q
Sbjct: 289 PFVSRLLGMGDLSGLVNKIQEFMPDNQQMQIMDKLGEGTFTLRLLYEMFQNLQRIGPLGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
++ MIPGFS F+ KG+E+E A++KR MT+MDSM D ELD D KL ++ RI R+A
Sbjct: 349 LVSMIPGFSGQFIEKGNEKEGQAKIKRYMTMMDSMTDAELDGTD-PKLMNQS--RINRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
+G+G +EV ++ +Y + A V KK+ + N ++ M + ++++ +
Sbjct: 406 RGSGRRVEEVVHMLDEYKRIAKVWKKL----------PVLNNNRRSDMNRDIRRISDAIP 455
Query: 195 PRVLHQMG 202
P +L Q+G
Sbjct: 456 PNMLTQLG 463
>gi|403371696|gb|EJY85731.1| Signal recognition particle 54 kDa protein, putative [Oxytricha
trifallax]
Length = 561
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
Query: 40 DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARL 99
D ++++E I+ G+F+LRDM +QF +++ MGP +Q++ MIPG S + + KG E+ES AR+
Sbjct: 315 DKQKKMVENIQKGEFSLRDMRDQFASVLNMGPLNQVVSMIPGLSSNLIPKGREKESTARI 374
Query: 100 KRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVK 159
KR + IMDSM D ELD F RI R+A+G+G +EV L+ ++ KFA +V+
Sbjct: 375 KRFLCIMDSMTDEELDCIKPMSDF-----RILRIAKGSGCRPEEVAFLLEEHKKFAKMVE 429
Query: 160 KMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+ G +K L D+ KN+N+ +L QQM+K +DP++L QMG
Sbjct: 430 QFGKMK-LNNQTDL-KNLNRNP-KQLMQQMSKAIDPKLLQQMG 469
>gi|125552939|gb|EAY98648.1| hypothetical protein OsI_20572 [Oryza sativa Indica Group]
Length = 483
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 97/147 (65%), Gaps = 4/147 (2%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL++K+ + + D EL++++ G FTLR Y+ FQN++ MGP Q
Sbjct: 289 PFVSRLLGMGDLSGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYDLFQNLLNMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
++ MIPGF + + KG ++ES A++KR MTIMDSM + ELD+ + KL S+ RI RVA
Sbjct: 349 VLSMIPGFRSELMPKGHDKESQAKIKRYMTIMDSMTNAELDSTN-PKLMSE--SRIKRVA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G T K+V D++ +Y + A V K+
Sbjct: 406 RGSGRTMKDVTDMLEEYKRIAKVCSKL 432
>gi|290977140|ref|XP_002671296.1| predicted protein [Naegleria gruberi]
gi|284084864|gb|EFC38552.1| predicted protein [Naegleria gruberi]
Length = 454
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
Query: 25 GDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GD++ L+ V E + ++ + I G +T+RDM E F +IMKMGP SQ+M MIPGFS
Sbjct: 278 GDLKTLLTTVQEAVDPTKQPQMFDNIAKGIYTIRDMREHFTSIMKMGPLSQVMSMIPGFS 337
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ L KGSEQES ARLK+ +TIMDSMND E+D D KL + Q+ RI R+A+G+G T K+
Sbjct: 338 EQLLPKGSEQESNARLKKYLTIMDSMNDTEMDCTDITKLPNMQS-RIMRIARGSGRTPKD 396
Query: 144 VKDLISQYTKFAAVVKKM 161
V++L+ Q+ F +++ ++
Sbjct: 397 VQELLEQFKVFQSMIGRV 414
>gi|221487598|gb|EEE25830.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii GT1]
Length = 714
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 105/170 (61%), Gaps = 16/170 (9%)
Query: 37 LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESM 96
+ ++ +EL++++ G+FTL DM EQF+N++KMGP S+++ M+PG + +SK EQ +
Sbjct: 383 VSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGSNLISKNQEQAGV 442
Query: 97 ARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAA 156
R+KR + IMDSM D EL K F+ RI RVAQG+G T +EVK L+ Q+ +F+
Sbjct: 443 MRIKRFLCIMDSMTDEELKCE---KQFTDS--RIVRVAQGSGTTLEEVKLLLEQHKQFSK 497
Query: 157 VVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQM----AKMMDPRVLHQMG 202
+V KMG I +TK MM+ QQM M+DPR+L QMG
Sbjct: 498 MVGKMGKI-------GLTKESALQNMMRNPQQMMSKVQNMLDPRILKQMG 540
>gi|237830449|ref|XP_002364522.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|211962186|gb|EEA97381.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|221507395|gb|EEE32999.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii VEG]
Length = 582
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 105/170 (61%), Gaps = 16/170 (9%)
Query: 37 LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESM 96
+ ++ +EL++++ G+FTL DM EQF+N++KMGP S+++ M+PG + +SK EQ +
Sbjct: 383 VSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGSNLISKNQEQAGV 442
Query: 97 ARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAA 156
R+KR + IMDSM D EL K F+ RI RVAQG+G T +EVK L+ Q+ +F+
Sbjct: 443 MRIKRFLCIMDSMTDEELKCE---KQFTDS--RIVRVAQGSGTTLEEVKLLLEQHKQFSK 497
Query: 157 VVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQM----AKMMDPRVLHQMG 202
+V KMG I +TK MM+ QQM M+DPR+L QMG
Sbjct: 498 MVGKMGKI-------GLTKESALQNMMRNPQQMMSKVQNMLDPRILKQMG 540
>gi|428673047|gb|EKX73960.1| signal recognition particle 54kDa protein 2, putative [Babesia
equi]
Length = 496
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 112/182 (61%), Gaps = 15/182 (8%)
Query: 25 GDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GDI GL++ + + + LD+ +L+E++ + +FT+RDMY+QFQ+++KMGP ++M M+PG
Sbjct: 298 GDINGLVNTLKDVMNLDEKPDLMERLVNAKFTIRDMYDQFQSLLKMGPVGKVMSMLPGIP 357
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ L+ G EQE +AR+KR M IMDSM D ELD + R+ R+A+G+G E
Sbjct: 358 PELLAAGREQEGVARIKRFMIIMDSMTDEELDC-----IKPVTESRVLRIAKGSGSHPAE 412
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKM---MDPRVLHQ 200
V L+ Q+ +++KM G G+ K G Q + NQ ++KM +DPR+L Q
Sbjct: 413 VVMLVDQHK----LLQKMVG--GMGKMGLTKDTAMQNMLRNPNQMLSKMQNFLDPRLLQQ 466
Query: 201 MG 202
MG
Sbjct: 467 MG 468
>gi|367023521|ref|XP_003661045.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
gi|347008313|gb|AEO55800.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
Length = 519
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 98/140 (70%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD +E I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMAGLVEHVQSLKLD-QKETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM D ELD+ DG K+F +Q R+TRVA+G+G T +E
Sbjct: 356 -NMMQGMDDEEGSLKLKRMIYICDSMTDKELDS-DG-KIFIEQPTRMTRVARGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|171676350|ref|XP_001903128.1| hypothetical protein [Podospora anserina S mat+]
gi|170936241|emb|CAP60900.1| unnamed protein product [Podospora anserina S mat+]
Length = 516
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTVRDLRDQLQNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++ ++E +LKR++ I DSM D ELD+ DG K+F +Q R+TRVA+G+G T +E
Sbjct: 356 -NIMANMDDEEGSLKLKRMIYICDSMTDKELDS-DG-KIFIEQPTRMTRVARGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRLMAGMAKKMGG 432
>gi|336264067|ref|XP_003346812.1| hypothetical protein SMAC_05070 [Sordaria macrospora k-hell]
gi|380090282|emb|CCC11858.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 512
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 98/140 (70%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E +LKR++ I DSM D ELD+ DG K+F++Q R+TRVA+G+G T +E
Sbjct: 356 S-MMQNMDDEEGSLKLKRMIYICDSMTDKELDS-DG-KIFTEQPTRMTRVAKGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|367036313|ref|XP_003648537.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
gi|346995798|gb|AEO62201.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
Length = 521
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD +E I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMAGLVEHVQSLKLD-QKETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM D ELD+ DG K+F Q R+TRVA+G+G T +E
Sbjct: 356 -NMMQGMDDEEGSLKLKRMIYICDSMTDKELDS-DG-KIFIDQPTRMTRVARGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|66362756|ref|XP_628344.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
gi|46229785|gb|EAK90603.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
Length = 515
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 115/182 (63%), Gaps = 11/182 (6%)
Query: 24 MGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL+ K+NE+ LD +++ ++ G FTLRDMYEQFQN++ MG S ++ MIPG
Sbjct: 312 LGDISGLMAKINEVVPLDRQPDMVNRLVQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGM 371
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ L+K EQ + RLK+ M IMDSM + ELDN + R+ R+++G+G + +
Sbjct: 372 GPNILAKEDEQAGIERLKKFMVIMDSMTESELDNEK-----TINASRVERISRGSGTSNQ 426
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNV--NQTQMMKLNQQMAKMMDPRVLHQ 200
+V++L+SQ+ F+ +V ++G + KGG ++ N TQ++ Q+M K +DPR+
Sbjct: 427 DVQELLSQHKMFSKMVGQIGKLGLGKKGGLDMSSIMKNPTQLI---QKMQKAIDPRIFKH 483
Query: 201 MG 202
MG
Sbjct: 484 MG 485
>gi|296420065|ref|XP_002839601.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635784|emb|CAZ83792.1| unnamed protein product [Tuber melanosporum]
Length = 546
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 99/139 (71%), Gaps = 4/139 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I+ G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDMQGLVEHVQSLKLD-QKDTMKHIQEGIFTVRDLRDQLGNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
Q G E+ SM +LKR++ IMDSM + ELD+ DG K FS Q R+TR+A G+G T +E
Sbjct: 356 QMMGDVGDEEGSM-KLKRMIYIMDSMTEKELDS-DG-KCFSDQPTRMTRIAHGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMG 162
V+D+++Q+ A + KKMG
Sbjct: 413 VEDVLTQHRMMAGMAKKMG 431
>gi|340923542|gb|EGS18445.1| hypothetical protein CTHT_0050420 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 514
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL++ V LKLD +E I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG +
Sbjct: 297 MGDIPGLVEHVQSLKLD-QKETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMA 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + + E +LKR++ I DSM D ELD+ DG K+F Q R+TRVA+G+G T +E
Sbjct: 356 -NLMQGMDDAEGSLKLKRMIYICDSMTDKELDS-DG-KIFIDQPTRMTRVARGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|345569889|gb|EGX52715.1| hypothetical protein AOL_s00007g498 [Arthrobotrys oligospora ATCC
24927]
Length = 511
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 105/149 (70%), Gaps = 5/149 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDMQGLVEHVQSLKLD-QKDTMKHIAEGLFTVRDLRDQLNNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
G E+ SM +LKR+M IMDSM ELD+ DG K+F +Q R+TR+A+G+G + +E
Sbjct: 356 NLMGDVGDEEGSM-KLKRMMYIMDSMTTKELDS-DG-KVFVQQPERMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGLFKGG 171
V+D+++Q+ A + KKM GG+K + +GG
Sbjct: 413 VEDVLTQHKMMAQMAKKMKGGMKAMQQGG 441
>gi|116200506|ref|XP_001226065.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175512|gb|EAQ82980.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 512
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 106/166 (63%), Gaps = 5/166 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD +E I+ I G FT+RD+ +Q QNIMKMGP S++ MIPG
Sbjct: 297 MGDMAGLVEHVQSLKLD-QKETIKHISEGVFTVRDLRDQLQNIMKMGPLSKMASMIPGMG 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ L + E +LKR++ I DSM D ELD+ DG KLF++Q R+TRVA+G+G T +E
Sbjct: 356 -NMLQGMDDDEGSLKLKRMIYICDSMTDKELDS-DG-KLFTEQPTRMTRVARGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG-IKGLFKGGDITKNVNQTQMMKLNQQ 188
V+DL++Q A + KKMGG IK + + N+ Q + Q+
Sbjct: 413 VEDLLTQQRMMAGMAKKMGGNIKNMQRAQSAMAGGNKAQQLAAMQK 458
>gi|401411601|ref|XP_003885248.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
gi|325119667|emb|CBZ55220.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
Length = 583
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 105/170 (61%), Gaps = 16/170 (9%)
Query: 37 LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESM 96
+ ++ +EL++++ G+FTL DM EQF+N++KMGP S+++ M+PG + +SK EQ +
Sbjct: 384 VSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGSNLISKNQEQAGV 443
Query: 97 ARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAA 156
R+KR + IMDSM D EL K F+ RI RVAQG+G + +EVK L+ Q+ +F+
Sbjct: 444 MRIKRFLCIMDSMTDEELKCD---KQFTD--SRILRVAQGSGTSLEEVKILLDQHKQFSK 498
Query: 157 VVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQM----AKMMDPRVLHQMG 202
+V KMG I +TK MM+ QQM M+DPR+L QMG
Sbjct: 499 MVGKMGKI-------GLTKESALQNMMRNPQQMMSKVQNMLDPRILKQMG 541
>gi|297743482|emb|CBI36349.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 4/134 (2%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E+ +D EL++K+ G FTLR MYEQFQNI+KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PGFS + + KG E+ES A++KR MT+MDSM + ELD + KL ++ RI R+A
Sbjct: 349 VFSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDTSN-PKLMNE--SRIMRIA 405
Query: 135 QGAGVTEKEVKDLI 148
+G+G +EV +++
Sbjct: 406 RGSGRQVREVMEML 419
>gi|440463596|gb|ELQ33166.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae Y34]
gi|440479190|gb|ELQ59973.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae
P131]
Length = 491
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 98/140 (70%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 272 MGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMS 330
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM D ELD+ DG K+F++Q R+TRVA+G+G +E
Sbjct: 331 -NMMQGMDDEEGTGKLKRMIYICDSMTDKELDS-DG-KIFTEQPTRMTRVARGSGTHVRE 387
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 388 VEDLLTQQRMMAGMAKKMGG 407
>gi|124809679|ref|XP_001348651.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|23497549|gb|AAN37090.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|326787503|gb|AEA07718.1| signal recognition particle 54 [Plasmodium falciparum]
Length = 500
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 10/180 (5%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL+ + E + +D EL+ ++ G+F LRDMY+QFQN+ KMG S++M MIPGF
Sbjct: 297 LGDISGLVSTIKEVIDIDKQPELMNRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGF 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +SKG+E+E + ++K+ M IMDSM + ELD + R R+ +G+G +
Sbjct: 357 GNNLISKGTEKEGIDKIKKFMVIMDSMTNEELDC-----IKPLNDSRCLRIVKGSGTRLQ 411
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++K+L+ Q+ +V KMG + GL + NQ Q M +M +MDP +L Q+G
Sbjct: 412 DIKELLEQFKFLQKMVVKMGKL-GLRENNISNLMRNQKQFM---SKMNNIMDPNMLKQLG 467
>gi|389628338|ref|XP_003711822.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
gi|351644154|gb|EHA52015.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
Length = 510
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 98/140 (70%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 291 MGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMS 349
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM D ELD+ DG K+F++Q R+TRVA+G+G +E
Sbjct: 350 -NMMQGMDDEEGTGKLKRMIYICDSMTDKELDS-DG-KIFTEQPTRMTRVARGSGTHVRE 406
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 407 VEDLLTQQRMMAGMAKKMGG 426
>gi|85098637|ref|XP_960643.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28922154|gb|EAA31407.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28949956|emb|CAD70717.1| probable signal recognition particle subunit SRP54 [Neurospora
crassa]
gi|336473358|gb|EGO61518.1| hypothetical protein NEUTE1DRAFT_120457 [Neurospora tetrasperma
FGSC 2508]
gi|350293361|gb|EGZ74446.1| signal recognition particle 54 kDa protein [Neurospora tetrasperma
FGSC 2509]
Length = 511
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM D ELD+ DG K+F Q R+TRVA+G+G T +E
Sbjct: 356 -NMMQNMDDEEGSLKLKRMIYICDSMTDKELDS-DG-KIFIDQPTRMTRVARGSGTTVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|67624587|ref|XP_668576.1| signal recognition particle protein SRP54 [Cryptosporidium hominis
TU502]
gi|54659796|gb|EAL38359.1| signal recognition particle protein SRP54 [Cryptosporidium hominis]
Length = 296
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 15/184 (8%)
Query: 24 MGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL+ K+NE+ LD +++ ++ G FTLRDMYEQFQN++ MG S ++ MIPG
Sbjct: 93 LGDISGLMAKINEVVPLDRQPDMVNRLVQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGM 152
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ L+K EQ + RLK+ M IMDSM + ELDN + R+ R+++G+G + +
Sbjct: 153 GPNILAKEDEQAGIERLKKFMVIMDSMTESELDNEK-----TINASRVERISRGSGTSNQ 207
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKG----GDITKNVNQTQMMKLNQQMAKMMDPRVL 198
+V++L+SQ+ F+ +V ++G + KG I KN Q L Q+M K +DPR+
Sbjct: 208 DVQELLSQHKMFSKMVGQIGKLGLGKKGGLDMSSIMKNPAQ-----LIQKMQKAIDPRIF 262
Query: 199 HQMG 202
MG
Sbjct: 263 KHMG 266
>gi|328772629|gb|EGF82667.1| hypothetical protein BATDEDRAFT_86146 [Batrachochytrium
dendrobatidis JAM81]
Length = 565
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 23 CMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGDI+GL++ V ++KL+ N +L++ I+ G+FTLR M +QF+ + MGP S++ MIPG
Sbjct: 311 SMGDIDGLMETVQDMKLE-NTDLMKNIEQGKFTLRSMKQQFELVTSMGPISKLASMIPGM 369
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
Q+ L++ Q+ +KR M I DSM + ELD+ DG K+F+ RI RVA+G+GVT +
Sbjct: 370 PQEMLAQMDGQDGPGLIKRFMCIFDSMTETELDS-DG-KVFNVHPTRIYRVAKGSGVTVQ 427
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFK---GGDITKNVNQTQMMKLNQQMAK 191
E++ L+ Q+ + A ++K +GG K + G+ V+ QM K+ Q +K
Sbjct: 428 EIETLLVQFKQMAGMIKSIGGSKSMLNKMAAGNQRGGVHPNQMAKMQSQFSK 479
>gi|156086872|ref|XP_001610843.1| signal recognition particle SRP54 protein [Babesia bovis T2Bo]
gi|154798096|gb|EDO07275.1| signal recognition particle SRP54 protein, putative [Babesia bovis]
Length = 499
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 15/183 (8%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGDI GLI+ + E+ ++ N+E++++I G +TLRDMYEQ NI+KMGP SQ++ M PG
Sbjct: 297 MGDINGLINTIQEIVGMNTNKEMVDRISSGIYTLRDMYEQITNILKMGPLSQVVSMFPGM 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
SEQ +A +K+ + IMDSM EL D K S+ RI R+A+G+G T
Sbjct: 357 FPGVFDSNSEQVGVANIKKFLCIMDSMTSDEL---DCDKPLSE--SRIVRIARGSGSTIG 411
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKM---MDPRVLH 199
E+ L+ Y +V K+G K +NVNQT M Q M+++ +DP++L
Sbjct: 412 EINQLMEHYKVLQKLVGKLG------KSSLSKENVNQTLMRNPQQMMSRLQQTIDPKLLS 465
Query: 200 QMG 202
+MG
Sbjct: 466 RMG 468
>gi|227202754|dbj|BAH56850.1| AT1G48900 [Arabidopsis thaliana]
Length = 450
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 105/164 (64%), Gaps = 10/164 (6%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK+ E+ D + EL+EK+ G FTLR MY+QFQNI+ MGP +
Sbjct: 289 PFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKE 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG S + + KG E+ES A++KR MT+MDSM + ELD+ + K+F++ R+ R+A
Sbjct: 349 VFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSN-PKVFNES--RMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFA---AVVKKMGGIK---GLFKGGD 172
+G+G +EV +++ Q +++K+MG K G+F GGD
Sbjct: 406 RGSGRQVREVMEMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGGD 449
>gi|325180969|emb|CCA15378.1| signal recognition particle putative [Albugo laibachii Nc14]
Length = 509
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 22/190 (11%)
Query: 24 MGDIEGLIDKVNELKL-DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGDI GL+++V + + DD +EL+ K + G +TLRD+Y+Q Q +MKMGP S++M MIPG
Sbjct: 297 MGDIRGLMEEVKQSGIFDDEKELMSKFQKGSYTLRDLYKQLQGVMKMGPLSKVMSMIPGL 356
Query: 83 ----SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
+Q G E+E RL+R + +MDSM D ELD + R R+A+G+G
Sbjct: 357 PPGMNQMMNMGGGEEEGSKRLRRFLFMMDSMTDAELDGQ-----VPINPSRQIRIAKGSG 411
Query: 139 VTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD------ITKNVNQTQMMKLNQQMAKM 192
EV L+ + +FA V+ +MG GL K GD + +N N + QQ++K+
Sbjct: 412 CGLFEVDYLLKCHKQFATVISRMGK-SGLMKTGDAGFEKQLARNPN-----AVMQQLSKV 465
Query: 193 MDPRVLHQMG 202
MD RVL QMG
Sbjct: 466 MDSRVLAQMG 475
>gi|320587877|gb|EFX00352.1| signal recognition particle protein srp54 [Grosmannia clavigera
kw1407]
Length = 530
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GLI+ V LKLD ++ I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMTGLIEHVQSLKLD-QKDTIKHITEGIFTVRDLRDQLQNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ +S ++E +LKR++ I DSM D ELD+ DG +LF Q R+TRVA+G+G +E
Sbjct: 356 -NMMSGMDDEEGSLKLKRMIYICDSMTDKELDS-DG-RLFLDQPSRMTRVAKGSGTFVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|429861458|gb|ELA36147.1| signal recognition particle 54 kda protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 501
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 267 MGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 325
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E A+LKR++ I DSM D ELD+ DG KLF +Q R+TRVA G+G + +E
Sbjct: 326 -GMMQGMDDEEGSAKLKRMIYICDSMTDKELDS-DG-KLFIEQPTRMTRVAHGSGTSVRE 382
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 383 VEDLLTQQRMMAGMAKKMGG 402
>gi|310800676|gb|EFQ35569.1| signal recognition particle protein SRP54 [Glomerella graminicola
M1.001]
Length = 526
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H L+F + + MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q
Sbjct: 278 HMLDFERFAPQQFVSKLLGMGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTVRDLRDQLS 336
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ GMIPG S + ++E A+LKR++ I DSM D ELD+ DG K+F
Sbjct: 337 NIMKMGPLSKMAGMIPGMS-GMMQGMDDEEGSAKLKRMIYICDSMTDKELDS-DG-KMFI 393
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
+Q R+TRVA G+G + +EV+DL++Q A + KKMGG
Sbjct: 394 EQPTRMTRVAHGSGTSVREVEDLLTQQRMMAGMAKKMGG 432
>gi|407425446|gb|EKF39427.1| signal recognition particle, putative [Trypanosoma cruzi
marinkellei]
Length = 484
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 117/202 (57%), Gaps = 18/202 (8%)
Query: 11 HYLNFPLY------CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGD+ L+D + + K+D + EL ++++ G FT+RDMYE Q
Sbjct: 278 HFEDFELFQPESFVSRMLGMGDMRALMDTMKDAKIDTDSELYKRLQDGLFTMRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++K+GP S++M +IPG S F E +A LK L+ IMDSM ELD+ K +
Sbjct: 338 NLLKLGPVSKVMNLIPGMS-SFSGFAGEVGDVA-LKSLIHIMDSMTASELDDARVKKTMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFK--GGDITKNVNQT 180
RI RVA+G+G + EV LI YT F +VKKMG K + K G ++ + Q
Sbjct: 396 --PSRILRVARGSGHSIHEVHKLIKMYTNFEEMVKKMGKMNFKAMSKDPSGMLSGRMGQQ 453
Query: 181 QMMKLNQQMAKMMDPRVLHQMG 202
QM Q+AK+++P +L QMG
Sbjct: 454 QM----TQLAKVLNPAMLQQMG 471
>gi|23295846|gb|AAN12396.1| signal recognition particle 54 kDa [Trypanosoma brucei]
Length = 487
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 18/202 (8%)
Query: 11 HYLNFPLY------CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGD+ L+D + + +D + EL ++ + GQFTLRDMYE Q
Sbjct: 278 HFDDFELFQPESFVSRMLGMGDMRALVDSMKDANIDTDSELYKRFQDGQFTLRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG S+IM MIPG S F + + LK + +MDSM ELD+ K +
Sbjct: 338 NVLKMGSVSKIMDMIPGMS-GFTGNAGDAGDVT-LKTFIHMMDSMTAAELDDSRVKKTMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMK 184
RI R+A+G+G T EV +LI+ YTKF VVKKMG + FK +T++ + K
Sbjct: 396 PT--RIHRIARGSGHTILEVHNLITSYTKFEDVVKKMGKVN--FKA--MTQDSSTAFSGK 449
Query: 185 LNQ----QMAKMMDPRVLHQMG 202
+ Q Q+AK ++P +L Q+G
Sbjct: 450 MGQQQVLQLAKALNPTMLRQIG 471
>gi|71755401|ref|XP_828615.1| signal recognition particle 54 kDa [Trypanosoma brucei TREU927]
gi|70834001|gb|EAN79503.1| signal recognition particle 54 kDa [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334497|emb|CBH17491.1| signal recognition particle 54 kDa, putative [Trypanosoma brucei
gambiense DAL972]
Length = 487
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 18/202 (8%)
Query: 11 HYLNFPLY------CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGD+ L+D + + +D + EL ++ + GQFTLRDMYE Q
Sbjct: 278 HFDDFELFQPESFVSRMLGMGDMRALVDSMKDANIDTDSELYKRFQDGQFTLRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG S+IM MIPG S F + + LK + +MDSM ELD+ K +
Sbjct: 338 NVLKMGSVSKIMDMIPGMS-GFTGNAGDAGDVT-LKTFIHMMDSMTAAELDDSRVKKTMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMK 184
RI R+A+G+G T EV +LI+ YTKF VVKKMG + FK +T++ + K
Sbjct: 396 PT--RIHRIARGSGHTILEVHNLITSYTKFEDVVKKMGKVN--FKA--MTQDSSTAFSGK 449
Query: 185 LNQ----QMAKMMDPRVLHQMG 202
+ Q Q+AK ++P +L Q+G
Sbjct: 450 MGQQQVLQLAKALNPTMLRQIG 471
>gi|392558546|gb|EIW51733.1| signal recognition particle protein [Trametes versicolor FP-101664
SS1]
Length = 578
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 23/206 (11%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGD++GL++ + ++ D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 294 PFISKLLGMGDVQGLVEHMQDMATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPL 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLF------SKQ 126
S+I MIPG QD L +GS++E R+KR++ I DSM ELD+ DGA LF K
Sbjct: 354 SKIASMIPGLPQDML-QGSDEEGSLRMKRMIYITDSMTAAELDS-DGA-LFMEWAKDGKP 410
Query: 127 TG---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMM 183
TG R+TRVA+G+G + +EV+DL+ QY A + K+ GG G + +
Sbjct: 411 TGLTWRVTRVARGSGTSVREVEDLLCQYRMMANMAKQAGGKNGWLSAMQKMQAAAGGRGR 470
Query: 184 KLN--------QQMAKMMDPRVLHQM 201
N Q M + M P +L QM
Sbjct: 471 GANGMPTQAQIQAMQRAMPPGMLQQM 496
>gi|402077639|gb|EJT72988.1| signal recognition particle protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 514
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 288 MGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMS 346
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + + E +LKR++ I DSM D ELD+ DG K+F +Q R+TRVA+G+G +E
Sbjct: 347 -NMMQGMDDDEGTNKLKRMIYICDSMTDKELDS-DG-KIFIEQPTRLTRVARGSGTHVRE 403
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 404 VEDLLTQQRMMAGMAKKMGG 423
>gi|242091039|ref|XP_002441352.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
gi|241946637|gb|EES19782.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
Length = 482
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 22/201 (10%)
Query: 11 HYLNF------PLYCGICCMGDIEGLIDKVNELKLDDNEE---LIEKIKHGQFTLRDMYE 61
H L+F P + MGD+ GL++K++E+ + +N+ + ++ G FTLR +YE
Sbjct: 278 HILDFEVFEVNPFVSRLLGMGDLSGLVNKIHEVIMPNNQPPNIIGPQLVEGTFTLRLLYE 337
Query: 62 QFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAK 121
FQ + MGP Q++ MIPGFS F+ KG+E+E A++KR MT+MDSM D ELD + K
Sbjct: 338 MFQTLQSMGPLGQVVSMIPGFSAQFIEKGNEKEGQAKIKRYMTMMDSMTDAELDGTN-PK 396
Query: 122 LFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQ 181
L ++ RI R+A+G+G +EV ++ +Y + A + KK+ + N +
Sbjct: 397 LMNQS--RINRIARGSGRLVEEVVHMLEEYKRIAKMWKKL----------PLPTNNRRLN 444
Query: 182 MMKLNQQMAKMMDPRVLHQMG 202
+ + +A + P +L+Q+G
Sbjct: 445 TNRDIRPIANAIPPNMLNQLG 465
>gi|70943367|ref|XP_741738.1| signal recognition particle 54 kDa protein [Plasmodium chabaudi
chabaudi]
gi|56520308|emb|CAH81656.1| signal recognition particle 54 kDa protein, putative [Plasmodium
chabaudi chabaudi]
Length = 279
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 107/180 (59%), Gaps = 10/180 (5%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI+GL+ + E + ++ +LI +I G+F LRDMY+QFQN+ KMG S++M MIPGF
Sbjct: 76 LGDIDGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGF 135
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +SKG+E+E + ++K+ M IMDSM + ELD + R R+ +G+G
Sbjct: 136 GTNLISKGTEKEGIDKIKKYMVIMDSMTNEELDC-----VKPLNDSRCIRICKGSGTRLS 190
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++++L+ Q+ +V KMG + GL G NQ Q M +M MMDP + + MG
Sbjct: 191 DIRELLEQFKFLQKMVLKMGKL-GLRDNGMGNLMRNQKQFM---SKMNNMMDPNMFNNMG 246
>gi|71651473|ref|XP_814414.1| signal recognition particle [Trypanosoma cruzi strain CL Brener]
gi|70879383|gb|EAN92563.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 487
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 112/201 (55%), Gaps = 22/201 (10%)
Query: 11 HYLNFPLY------CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGD+ L+D + + +D + EL + + GQFT+RDMYE Q
Sbjct: 278 HFEDFELFQPESFVSRMLGMGDMRALMDTMKDANIDTDSELYRRFQDGQFTMRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG S+IM MIPG S LS + + LK + IMDSM ELD+ K +
Sbjct: 338 NVLKMGSVSKIMNMIPGMSA--LSGAAGELGDVTLKAFIHIMDSMTAAELDDARVKKTMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK------GGDITKNVN 178
RI RVA+G+G + EV +LI+ YTKF VVKKMG + FK G ++ +
Sbjct: 396 --PSRILRVARGSGHSIHEVHNLITSYTKFEEVVKKMGKMN--FKAMSQDPGSMLSGRMG 451
Query: 179 QTQMMKLNQQMAKMMDPRVLH 199
Q QM Q+AK ++P +L
Sbjct: 452 QQQMT----QLAKALNPTMLR 468
>gi|380490983|emb|CCF35637.1| signal recognition particle protein [Colletotrichum higginsianum]
Length = 501
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H L+F + + MGD+ GL++ V LKLD ++ I+ I G FT+RD+ +Q
Sbjct: 278 HMLDFERFAPQQFVSKLLGMGDMAGLVEHVQSLKLD-QKDTIKHITEGIFTVRDLRDQLS 336
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ GMIPG S + ++E A+LKR++ I DSM + ELD+ DG K+F
Sbjct: 337 NIMKMGPLSKMAGMIPGMS-GMMQGMDDEEGSAKLKRMIYICDSMTEKELDS-DG-KMFI 393
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
+Q R+TRVA G+G + +EV+DL++Q A + KKMGG
Sbjct: 394 EQPTRMTRVAHGSGTSVREVEDLLTQQRMMAGMAKKMGG 432
>gi|342185665|emb|CCC95150.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 509
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 112/183 (61%), Gaps = 12/183 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L+D + + +D + L ++++ GQFT+RDMYE QN++KMG S+IM MIPG S
Sbjct: 319 MGDMQSLVDSMKDANIDTDSVLYKRLQEGQFTMRDMYEHLQNVLKMGSVSKIMDMIPGMS 378
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+S + S A LK + +MDSM ELD DG + R+ R+A+G+G T E
Sbjct: 379 G--MSGCAGDSSDATLKSFIHMMDSMTSAELD--DGRVKKTMTPTRLHRIARGSGHTMFE 434
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ----QMAKMMDPRVLH 199
V +LI+ YTKF VVKKMG + FK +T++ + ++ Q Q+AK ++P +L
Sbjct: 435 VHNLINSYTKFEDVVKKMGKVN--FKA--MTQDSSTAFSGRVGQQQVTQLAKALNPAMLR 490
Query: 200 QMG 202
Q+G
Sbjct: 491 QLG 493
>gi|389585354|dbj|GAB68085.1| signal recognition particle 54 kDa protein [Plasmodium cynomolgi
strain B]
Length = 485
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 109/180 (60%), Gaps = 10/180 (5%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL+ + E + ++ +LI ++ G+F LRDMY+QFQN+ KMG S++M MIPGF
Sbjct: 282 LGDINGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGF 341
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +SKG+E+E + ++K+ M IMDSM + ELD + R R+ +G+G +
Sbjct: 342 GNNLISKGTEKEGIEKIKKFMVIMDSMTNEELDC-----VKPLNDSRCLRICKGSGTRLQ 396
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++++L+ Q+ +V KMG + GL + + NQ Q + +M M+DP +L QMG
Sbjct: 397 DIRELLEQFKFLKNMVSKMGKL-GLRENNLGSLMRNQKQFL---SKMNNMIDPSMLGQMG 452
>gi|340058713|emb|CCC53073.1| putative signal recognition particle [Trypanosoma vivax Y486]
Length = 487
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 116/204 (56%), Gaps = 22/204 (10%)
Query: 11 HYLNFPLY------CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ F L+ + MGD+ L+D + + +D + EL ++ + GQFT+RDMYE Q
Sbjct: 278 HFDEFELFQPESFVSRLLGMGDMRALVDTMKDANIDTDSELYKRFQEGQFTMRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG S+IMGM+PG + S + + +K + IMDSM ELD+ K+ +
Sbjct: 338 NVLKMGSMSKIMGMLPGMAGQ--SDAAGEMGDVTIKSFIHIMDSMTGVELDDSRVKKMMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK------GGDITKNVN 178
RI RVA+G+G + EV++LI+ Y KF VVKKMG + FK G ++ +
Sbjct: 396 PS--RIHRVARGSGHSILEVQNLINSYMKFEDVVKKMGKVN--FKAMSEDPGSILSGRLG 451
Query: 179 QTQMMKLNQQMAKMMDPRVLHQMG 202
Q QM Q+AK ++P +L Q+G
Sbjct: 452 QQQM----SQLAKALNPTMLRQIG 471
>gi|340508125|gb|EGR33903.1| signal recognition particle 54 kda protein srp54, putative
[Ichthyophthirius multifiliis]
Length = 536
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 110/180 (61%), Gaps = 9/180 (5%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL KV E + + +LI +I GQF++RD QF++I+K+G SQ M MIPG
Sbjct: 296 LGDIAGLFQKVTEVIDVKQQPQLINRIAEGQFSIRDFQSQFKSILKLGSISQFMSMIPGL 355
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
FL K +E+ES+ ++K+ + IMDSMND ELD DG K+ K RI ++A G+G + +
Sbjct: 356 GNSFLDKNNEKESIKKVKKFLCIMDSMNDLELDG-DG-KISEK---RIVKIAYGSGNSIE 410
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
EV L+ +Y + + V K+G L KG D + N+ Q ++ +M +DP+++ MG
Sbjct: 411 EVHSLLEEYKRLSKVFGKLGKTN-LGKGNDFS-NI-QRNAQQIAGKMGSALDPKMIQSMG 467
>gi|452841447|gb|EME43384.1| hypothetical protein DOTSEDRAFT_72702 [Dothistroma septosporum
NZE10]
Length = 522
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 107/166 (64%), Gaps = 5/166 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD +E ++ I G+F++RDM +Q QNIMK+GP S++ GMIPG S
Sbjct: 297 MGDMQGLVEHVQSLKLD-QKETMKNITEGKFSVRDMRDQLQNIMKLGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM ELD+ DG K+F Q RITRVA+G+G + +E
Sbjct: 356 -NMMGGVDDEEGGMKLKRMIYICDSMTQKELDS-DG-KMFKDQPTRITRVARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGLFKGGDITKNVNQTQMMKLNQQ 188
V++L+SQ A + KKM GG+ + K N+ Q M Q+
Sbjct: 413 VEELLSQQQMMAGMAKKMKGGMANMQKAQGAMGGANRQQQMAAMQK 458
>gi|407860349|gb|EKG07361.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 578
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 22/200 (11%)
Query: 11 HYLNFPLY------CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGD+ L+D + + +D + EL + + GQFT+RDMYE Q
Sbjct: 369 HFEDFELFQPESFVSRMLGMGDMRALMDTMKDANIDTDSELYRRFQDGQFTMRDMYEHLQ 428
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG S+IM MIPG S LS + + LK + IMDSM ELD+ K +
Sbjct: 429 NVLKMGSVSKIMNMIPGMSA--LSGAAGELGDVALKAFIHIMDSMTAAELDDARVKKTMT 486
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK------GGDITKNVN 178
RI RVA+G+G + EV +LI+ YTKF VVKKMG + FK G ++ +
Sbjct: 487 PS--RILRVARGSGHSIHEVHNLITSYTKFEEVVKKMGKMN--FKAMSQDPGSMLSGRMG 542
Query: 179 QTQMMKLNQQMAKMMDPRVL 198
Q QM Q+AK ++P +L
Sbjct: 543 QQQMT----QLAKALNPTML 558
>gi|223993863|ref|XP_002286615.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
gi|220977930|gb|EED96256.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 451
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
Query: 21 ICCMGDIEGLIDKVNELKLDDN-EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ GD+ GL++++ L D N EEL++ ++ GQFTLRDMY+QFQ +MK+GP +++MGM+
Sbjct: 307 LLGFGDVRGLMEEMKSLNSDKNQEELMKNMQKGQFTLRDMYKQFQQVMKIGPLNKVMGML 366
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDG--AKLFSKQTGRITRVAQGA 137
PG + + + + ES RL++ M +MDSMND ELD + AK RI R+A G+
Sbjct: 367 PGMPEYLMPQNGDDESTNRLRKFMYMMDSMNDAELDGKIDLHAKNDKSVEKRINRIAAGS 426
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMG 162
G EVK L+ + +F +V KMG
Sbjct: 427 GTHPTEVKMLLQAHKQFEGMVSKMG 451
>gi|430812104|emb|CCJ30440.1| unnamed protein product [Pneumocystis jirovecii]
Length = 515
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 111/169 (65%), Gaps = 10/169 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI+G ++ LKL+ +++ I+ I+ G FT+RD+ + +IMKMGP ++++ MIPG +
Sbjct: 294 MGDIQGFMEHFQSLKLEQSKDTIKNIEKGVFTIRDLKDHLGSIMKMGPINKLVSMIPGTA 353
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
Q + +G E+ES + KRL+ IMDSM + ELD+ DG K+F+ + RI R+A G+G + E
Sbjct: 354 Q--MMEGIEEESSRKFKRLIYIMDSMTEKELDS-DG-KIFTNEPSRIIRIAMGSGTSVSE 409
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKM 192
VK L+SQ+ A + KK+G KGG +N+N ++K QQ+A +
Sbjct: 410 VKGLLSQHHIMAGIAKKVGE-----KGGLKNQNMN-PNLLKNPQQIASI 452
>gi|82705448|ref|XP_726974.1| signal recognition particle protein SRP54 [Plasmodium yoelii yoelii
17XNL]
gi|23482603|gb|EAA18539.1| signal recognition particle protein SRP54 [Plasmodium yoelii
yoelii]
Length = 500
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 14/182 (7%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI+GL+ + E + ++ +LI +I G+F LRDMY+QFQN+ KMG S++M MIPGF
Sbjct: 297 LGDIDGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGF 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +SKG+E+E + ++K+ M IMDSM + ELD + R R+ +G+G
Sbjct: 357 GTNLISKGTEKEGIDKIKKYMVIMDSMTNEELDC-----VKPLNDSRCIRICKGSGTKLS 411
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDPRVLHQ 200
++K+L+ Q+ +V KMG + GL G++ +N Q M K+N MMDP + +
Sbjct: 412 DIKELLEQFKFLQKMVLKMGKL-GLRDNNMGNLMRNPKQF-MSKMNN----MMDPNMFNN 465
Query: 201 MG 202
MG
Sbjct: 466 MG 467
>gi|169853092|ref|XP_001833227.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
gi|116505605|gb|EAU88500.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
Length = 574
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 114/205 (55%), Gaps = 21/205 (10%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + +L D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 294 PFISKLLGLGDVQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPI 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLF-----SKQT 127
S+I MIPG Q+ L +GS++E R+KR++ I DSM ELD+ DG+ K T
Sbjct: 354 SKIASMIPGLPQELL-QGSDEEGSMRMKRMIYITDSMTASELDS-DGSPFLLTGKDGKPT 411
Query: 128 G---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK--------GGDITKN 176
G R+TRVA+G+G + +EV++L+ QY A + K+ GG G G +
Sbjct: 412 GLTWRVTRVAKGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLSAMQKMQQAAGGKGRG 471
Query: 177 VNQTQMMKLNQQMAKMMDPRVLHQM 201
+N + Q M + M P +L QM
Sbjct: 472 LNGMPTPQQIQAMQRAMPPGMLQQM 496
>gi|221059453|ref|XP_002260372.1| signal recognition particle [Plasmodium knowlesi strain H]
gi|193810445|emb|CAQ41639.1| signal recognition particle, putative [Plasmodium knowlesi strain
H]
Length = 500
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 109/180 (60%), Gaps = 10/180 (5%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL+ + E + ++ +LI ++ G+F LRDMY+QFQN+ KMG S++M MIPGF
Sbjct: 297 LGDINGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGF 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +SKG+E+E + ++K+ M IMDSM + ELD + R R+ +G+G +
Sbjct: 357 GNNIISKGTEKEGIEKIKKFMVIMDSMTNEELDC-----VKPLNDSRCLRICKGSGTRLQ 411
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++++L+ Q+ +V KMG + GL + + NQ Q + +M ++DP +L QMG
Sbjct: 412 DIRELLEQFKFLKNMVSKMGKL-GLRENNIGSLMRNQKQFL---SKMNNIIDPSMLGQMG 467
>gi|68072789|ref|XP_678308.1| signal recognition particle 54 kDa protein [Plasmodium berghei
strain ANKA]
gi|56498733|emb|CAH96838.1| signal recognition particle 54 kDa protein, putative [Plasmodium
berghei]
Length = 500
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 14/182 (7%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI+GL+ + E + ++ +LI +I G+F LRDMY+QFQN+ KMG S++M MIPGF
Sbjct: 297 LGDIDGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGF 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +SKG+E+E + ++K+ M IMDSM + ELD + R R+ +G+G
Sbjct: 357 GTNLISKGTEKEGIDKIKKYMVIMDSMTNEELDC-----VKPLNDSRCIRICKGSGTKLS 411
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDPRVLHQ 200
++K+L+ Q+ +V KMG + GL G++ + NQ Q M +M +MDP + +
Sbjct: 412 DIKELLEQFKFLQKMVLKMGKL-GLRDNNMGNLMR--NQKQFM---SKMNNIMDPNMFNN 465
Query: 201 MG 202
MG
Sbjct: 466 MG 467
>gi|440804234|gb|ELR25111.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 117/189 (61%), Gaps = 16/189 (8%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GL+D + + + LD EL +++ G FTLRDMYEQF NI+KMGP ++
Sbjct: 289 PFVSKMLGMGDMAGLVDTIKKAVPLDGQPELYKRLSEGIFTLRDMYEQFSNILKMGPLNK 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQT-GRITRV 133
+M M+PG L +G+ ++S ++K MTIMDSM D ELD+ +K+ +K + RI R+
Sbjct: 349 VMEMLPGMGS-ILKEGAGRDSSQKIKSYMTIMDSMTD-ELDD---SKVLAKNSQSRIVRI 403
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMM 193
A+G+G + KEV +L+ Q+ F V+KK+ G+K G +N++ QM+ ++
Sbjct: 404 ARGSGRSVKEVNELLEQFKHFEKVMKKVKGLKLGKGGELKGRNLS---------QMSNLI 454
Query: 194 DPRVLHQMG 202
P V+ QMG
Sbjct: 455 PPHVMKQMG 463
>gi|146087779|ref|XP_001465902.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|398015951|ref|XP_003861164.1| signal recognition particle, putative [Leishmania donovani]
gi|134070003|emb|CAM68333.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|322499389|emb|CBZ34462.1| signal recognition particle, putative [Leishmania donovani]
Length = 519
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 117/204 (57%), Gaps = 22/204 (10%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGDI GL+D + + +D NEE+ ++++ G FT+RDMYE Q
Sbjct: 278 HFEDFDLFNPERFVQKMLGMGDIGGLMDTMRDANIDGNEEVYKRLQDGLFTMRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG +IM M+PG S + G Q+ LK + ++DSM ELD K+ +
Sbjct: 338 NVLKMGSVGKIMEMLPGMSGHAATAG--QQGDIALKGFIHMLDSMTVAELDEAKVKKMMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG------GDITKNVN 178
R+ R+A+G+G + EV++LI YTKF +VKKMG I FK G ++
Sbjct: 396 --PSRMHRIARGSGHSVVEVQNLIISYTKFEEIVKKMGKIN--FKAMMQDSSGPAAGHMG 451
Query: 179 QTQMMKLNQQMAKMMDPRVLHQMG 202
Q QM Q+AK+++P +L Q+G
Sbjct: 452 QQQM----GQLAKLLNPNMLRQIG 471
>gi|145324887|ref|NP_001077690.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|332194243|gb|AEE32364.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 431
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 93/145 (64%), Gaps = 4/145 (2%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK+ E+ D + EL+EK+ G FTLR MY+QFQNI+ MGP +
Sbjct: 289 PFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKE 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG S + + KG E+ES A++KR MT+MDSM + ELD+ + K+F++ R+ R+A
Sbjct: 349 VFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSN-PKVFNE--SRMMRIA 405
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVK 159
+G+G +EV ++ S AV +
Sbjct: 406 RGSGRQVREVMEICSSRLAAWAVCR 430
>gi|145351050|ref|XP_001419900.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144580133|gb|ABO98193.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 513
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 96/143 (67%), Gaps = 4/143 (2%)
Query: 24 MGDIEGLIDKVNELKLDDN-EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGDI+GL++K+NE+ +++ E+L+E G FT+R +YEQFQN+ MGP S IM M+PG
Sbjct: 310 MGDIKGLVEKMNEIVPEESAEKLMEAFGSGTFTMRLLYEQFQNLQNMGPISSIMSMVPGM 369
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ D + KG E++ R+K +M +MDSM D ELD + +K+F+ + R+ RV +GAG
Sbjct: 370 A-DMIPKGGEEQGTKRMKSMMVLMDSMTDAELDAPNASKIFNVK--RMERVCRGAGRLPS 426
Query: 143 EVKDLISQYTKFAAVVKKMGGIK 165
E+ L+ ++ + ++ KM GIK
Sbjct: 427 EMITLLEEHKRLGKMMGKMKGIK 449
>gi|452981868|gb|EME81627.1| hypothetical protein MYCFIDRAFT_71818 [Pseudocercospora fijiensis
CIRAD86]
Length = 521
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD +E ++ I G+F++RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMQGLVEHVQSLKLD-QKETMKNITEGKFSVRDLRDQLQNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + + ++E +LKR++ I DSM ELD+ DG K+F +Q RITRVA+G+G + +E
Sbjct: 356 -NMMGQMDDEEGGMKLKRMIYICDSMTAKELDS-DG-KMFVEQPTRITRVARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V++L++Q A + KKM G
Sbjct: 413 VEELLTQQRMMAGMAKKMKG 432
>gi|440633691|gb|ELR03610.1| signal recognition particle protein SRP54 [Geomyces destructans
20631-21]
Length = 527
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 111/171 (64%), Gaps = 6/171 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ I+ I G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDMQGLVEHVQSLKLD-QKDTIKHIAEGVFTIRDLRDQLSNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E +LKR++ I DSM ELD DG KLF +Q R+TR+A G+G + +E
Sbjct: 356 -GMMQGMDDEEGSLKLKRMIYICDSMTTKELDC-DG-KLFIEQPTRMTRIAHGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG-IKGLFKG-GDITKNVNQTQMMKLNQQMAKM 192
V+D+++Q+ A + KKMGG +K + + G + + Q QM + +++A M
Sbjct: 413 VEDILTQHKMMAGMAKKMGGNMKNMQRSQGAMGGSNKQQQMAAMQKRLASM 463
>gi|302408571|ref|XP_003002120.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
gi|261359041|gb|EEY21469.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
Length = 518
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H L+F + + MGD+ L++ V LKLD ++ ++ I G FT+RD+ +Q
Sbjct: 270 HMLDFERFAPQQFVQKLLGMGDMASLVEHVQSLKLD-QKDTMKHITEGIFTVRDLRDQLS 328
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ GMIPG S + ++E +LKR++ I DSM D ELD+ DG K+F+
Sbjct: 329 NIMKMGPLSKMAGMIPGMS-GMMQGMDDEEGSLKLKRMIYICDSMTDKELDS-DG-KMFT 385
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
+Q R+TRVA+G+G + +EV+DL++Q A + KKMGG
Sbjct: 386 EQPTRMTRVARGSGTSVREVEDLLTQQRMMAGMAKKMGG 424
>gi|409045874|gb|EKM55354.1| hypothetical protein PHACADRAFT_255925 [Phanerochaete carnosa
HHB-10118-sp]
Length = 564
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 114/205 (55%), Gaps = 21/205 (10%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + ++ D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 294 PFISKLLGLGDVQGLMEHMQDIATQNPDKQKEIAKKLEEGKLSIRDWREQIQNVMSMGPI 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKL--FSKQ---- 126
S+I MIPG Q+ + +GS++E R+KR++ I DSM ELD+ DG+ F K
Sbjct: 354 SKIASMIPGLPQEIV-QGSDEEGSMRMKRMIYISDSMTAAELDS-DGSPFMEFGKDGKPI 411
Query: 127 --TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLF--------KGGDITKN 176
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G G +
Sbjct: 412 GLTSRVTRVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAAQKMQQAAGGRGRG 471
Query: 177 VNQTQMMKLNQQMAKMMDPRVLHQM 201
VN T Q M + M P +L Q+
Sbjct: 472 VNGTPTPAQIQAMQRAMPPGMLQQL 496
>gi|346975514|gb|EGY18966.1| srp54-like protein [Verticillium dahliae VdLs.17]
Length = 525
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H L+F + + MGD+ L++ V LKLD ++ ++ I G FT+RD+ +Q
Sbjct: 278 HMLDFERFAPQQFVQKLLGMGDMASLVEHVQSLKLD-QKDTMKHITEGIFTVRDLRDQLS 336
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ GMIPG S + ++E +LKR++ I DSM D ELD+ DG K+F+
Sbjct: 337 NIMKMGPLSKMAGMIPGMS-GMMQGMDDEEGSLKLKRMIYICDSMTDKELDS-DG-KMFT 393
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
+Q R+TRVA+G+G + +EV+DL++Q A + KKMGG
Sbjct: 394 EQPTRMTRVARGSGTSVREVEDLLTQQRMMAGMAKKMGG 432
>gi|449297804|gb|EMC93821.1| hypothetical protein BAUCODRAFT_93699 [Baudoinia compniacensis UAMH
10762]
Length = 526
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 108/166 (65%), Gaps = 5/166 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD +E ++ I G+F++RDM +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDMQGLVEHVQSLKLD-QKETMKNISEGKFSVRDMRDQLGNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM ELD+ DG K F +Q R+TRVA+G+G + +E
Sbjct: 356 -NMMGSMDDEEGSVKLKRMIYICDSMTVKELDS-DG-KCFVEQPSRMTRVARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGLFKGGDITKNVNQTQMMKLNQQ 188
V++L++Q+ A + KKM GG++ + K N+ Q M Q+
Sbjct: 413 VEELLTQHRMMAGMAKKMKGGMQNMQKAQGQLGGANRQQQMAAMQK 458
>gi|361124020|gb|EHK96146.1| putative Signal recognition particle 54 kDa protein like protein
[Glarea lozoyensis 74030]
Length = 540
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 112/171 (65%), Gaps = 6/171 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 308 MGDMQGLVEHVQSLKLD-QKDTMKHIVEGVFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 366
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E +LKR++ I DSM ELD+ DG K+F +Q R+TR+A G+G + +E
Sbjct: 367 -GMMQGMDDEEGSLKLKRMIYICDSMTAKELDS-DG-KMFIEQPTRMTRIACGSGTSVRE 423
Query: 144 VKDLISQYTKFAAVVKKMGG-IKGLFKG-GDITKNVNQTQMMKLNQQMAKM 192
V+DL++Q+ A + KKMGG +K + K G ++ Q QM + +++A M
Sbjct: 424 VEDLLTQHKMMAGMAKKMGGNMKNMQKAQGAMSGANKQQQMAAMQKRLASM 474
>gi|401826054|ref|XP_003887121.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
gi|392998279|gb|AFM98140.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
Length = 466
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 118/179 (65%), Gaps = 9/179 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+EGL++KV L +D+ +E+++K++ G+FTL D Y+QFQ I+ +GP S+++ M+PGFS
Sbjct: 294 MGDVEGLMEKVGSLGIDE-KEVVKKLRQGKFTLGDFYDQFQKILSLGPISKLLEMMPGFS 352
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
L ++ES K+L+ + DSM+ GELD+ ++F ++ R+ RVA+G+G + +
Sbjct: 353 GLSL---PDEES---FKKLIYVFDSMSRGELDST--GQIFEREPSRVMRVARGSGTSVQG 404
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V ++++Q+ K AV++K+ I G+ K+++ +Q KL +Q ++ +L +MG
Sbjct: 405 VVEILTQFKKAHAVMQKISSIPGIESMMGNPKSMSLSQKAKLKEQARNILPKDLLDRMG 463
>gi|393216852|gb|EJD02342.1| signal recognition particle protein [Fomitiporia mediterranea
MF3/22]
Length = 578
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 104/166 (62%), Gaps = 13/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ +++L + E E+ +K++ G+ ++RD EQ QNIM MGP
Sbjct: 294 PFISKLLGLGDVQGLMEHMHDLANANPEKQKEMAKKLEEGKLSIRDWREQIQNIMNMGPL 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKL--FSKQ---- 126
S+I MIPGF QD L +GS++E R+KR++ I DSM+ ELD+ DG+ F K
Sbjct: 354 SKIASMIPGFPQDML-QGSDEEGTLRMKRMLYITDSMSAQELDS-DGSLFLTFGKDGKPD 411
Query: 127 --TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G +
Sbjct: 412 GITWRVTRVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWMQA 457
>gi|156100321|ref|XP_001615888.1| signal recognition particle 54 kDa protein [Plasmodium vivax Sal-1]
gi|148804762|gb|EDL46161.1| signal recognition particle 54 kDa protein, putative [Plasmodium
vivax]
Length = 500
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 107/180 (59%), Gaps = 10/180 (5%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI GL+ + E + ++ +LI ++ G+F LRDMY+QFQN+ KMG S++M MIPGF
Sbjct: 297 LGDINGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGF 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +SKG+E+E + ++K+ M IMDSM + ELD + R R+ +G+G +
Sbjct: 357 GNNLISKGTEKEGIEKIKKFMVIMDSMTNEELDC-----VKPLNDSRCLRICKGSGTRLQ 411
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
++++L+ Q+ +V KMG + GL + + NQ + +M +DP +L QMG
Sbjct: 412 DIRELLEQFKFLKNMVSKMGKL-GLRENNLNSLMRNQKHFL---SKMNNFIDPSMLGQMG 467
>gi|396081243|gb|AFN82861.1| signal recognition particle protein Srp54 [Encephalitozoon romaleae
SJ-2008]
Length = 466
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 115/178 (64%), Gaps = 9/178 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+EGL++KV L +D+ +E+++K+K G+FTL D Y+QFQ I+ +GP S+++ MIPGFS
Sbjct: 294 MGDVEGLMEKVGSLGIDE-KEVVKKLKQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFS 352
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
L ++ES K+L+ + DSM+ GELD+ ++F ++ R+ RVA+G+G + +
Sbjct: 353 GLSL---PDEES---FKKLIYVFDSMSRGELDST--GQIFEREPTRVVRVARGSGTSVQG 404
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
V +++SQ+ K A+++K I G+ +++ +Q KL +Q ++ +L +M
Sbjct: 405 VTEILSQFKKVHAMMQKFSSIPGIENMMGNPSSISLSQKAKLKEQAKNILPKDLLDRM 462
>gi|426200103|gb|EKV50027.1| hypothetical protein AGABI2DRAFT_190440 [Agaricus bisporus var.
bisporus H97]
Length = 562
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + +L D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 295 PFVSKLLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPI 354
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS-----KQT 127
S+I MIPG Q+ L +GS++E R+KR++ I DSM GELD+ DG+ K T
Sbjct: 355 SKIASMIPGLPQEML-QGSDEEGSQRMKRMIYITDSMTAGELDS-DGSPFMESGKDGKPT 412
Query: 128 G---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
G R+TRVA+G+G + +EV++L+ QY A + K+ GG G +
Sbjct: 413 GLTWRVTRVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQA 458
>gi|322695331|gb|EFY87141.1| signal recognition particle 54 kDa protein [Metarhizium acridum
CQMa 102]
Length = 522
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V L L+ ++ I+ I+ G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDMAGLVEHVQSLNLN-QKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E A+LKR++ I DSM D ELD+ DG K+ +Q R+TR+A+G+G + +E
Sbjct: 356 -NMMQGMDDEEGSAKLKRMIYICDSMTDKELDS-DG-KILIEQPTRMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|322712654|gb|EFZ04227.1| signal recognition particle 54 kDa protein [Metarhizium anisopliae
ARSEF 23]
Length = 522
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V L L+ ++ I+ I+ G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDMAGLVEHVQSLNLN-QKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E A+LKR++ I DSM D ELD+ DG K+ +Q R+TR+A+G+G + +E
Sbjct: 356 -NMMQGMDDEEGSAKLKRMIYICDSMTDKELDS-DG-KILIEQPTRMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 413 VEDLLTQQRMMAGMAKKMGG 432
>gi|409082272|gb|EKM82630.1| hypothetical protein AGABI1DRAFT_111220 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 562
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + +L D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 295 PFISKLLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPI 354
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS-----KQT 127
S+I MIPG Q+ L +GS++E R+KR++ I DSM GELD+ DG+ K T
Sbjct: 355 SKIASMIPGLPQEML-QGSDEEGSQRMKRMIYITDSMTAGELDS-DGSPFMESGKDGKPT 412
Query: 128 G---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
G R+TRVA+G+G + +EV++L+ QY A + K+ GG G +
Sbjct: 413 GLTWRVTRVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQA 458
>gi|170088384|ref|XP_001875415.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650615|gb|EDR14856.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 543
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 13/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + +L D +E+ +K++ G+ ++RD EQ N+M MGP
Sbjct: 295 PFISKLLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQISNVMNMGPI 354
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS-------- 124
S+I MIPG QD L +GS++E R+KR++ I DSM GELD+ DGA
Sbjct: 355 SKIASMIPGLPQDML-QGSDEEGSLRMKRMIYITDSMTAGELDS-DGAPFMEVGKDGKPV 412
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G +
Sbjct: 413 GLTWRVTRVAKGSGTSVREVEELLCQYRMMATMAKQAGGKNGWLQA 458
>gi|402697958|gb|AFQ91166.1| signal recognition particle 54kDa, partial [Pseudemys concinna]
Length = 66
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/66 (83%), Positives = 59/66 (89%)
Query: 35 NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQE 94
NELKLDDNE IEK KHGQF LRDMY QFQNJMKMGPFSQI+GMIPGF DF+SKG+EQE
Sbjct: 1 NELKLDDNEAXIEKXKHGQFXLRDMYXQFQNJMKMGPFSQILGMIPGFGTDFMSKGNEQE 60
Query: 95 SMARLK 100
SMARLK
Sbjct: 61 SMARLK 66
>gi|213408098|ref|XP_002174820.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
gi|212002867|gb|EEB08527.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
Length = 537
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 102/165 (61%), Gaps = 7/165 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDIEGL++ V L LD + +++ ++ G+FT+RD +Q NIMK+GP S++ MIPG
Sbjct: 297 MGDIEGLLEHVQSLGLDKQQNMVKNLEQGKFTVRDFRDQLSNIMKLGPLSKMASMIPGMG 356
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
D ++ + E R+KR++ I+DSM + EL N DG +F +Q RI RVA+G+G + E
Sbjct: 357 -DMMNGMDDAEGSMRMKRMLFIVDSMTEQEL-NSDGL-IFKEQPTRIMRVARGSGTSVLE 413
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFK----GGDITKNVNQTQMMK 184
V++ +SQ FA + KKMGG G+ G + K+ Q M+
Sbjct: 414 VEETLSQVRVFAQMAKKMGGKDGILNQMGGAGGLKKDPKQIAAMQ 458
>gi|401422796|ref|XP_003875885.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492125|emb|CBZ27399.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 519
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 116/203 (57%), Gaps = 22/203 (10%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGDI GL+D + + +D NEE+ ++++ G FT+RDMYE Q
Sbjct: 278 HFEDFDLFNPERFVQKMLGMGDIGGLMDTMRDANIDGNEEVYKRLQDGLFTMRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG +IM M+PG S + G Q+ LK + ++DSM ELD K+ +
Sbjct: 338 NVLKMGSVGKIMEMLPGMSGHAATAG--QQGDIALKGFIHMLDSMTVAELDEAKVKKMMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG------GDITKNVN 178
R+ R+A+G+G + EV++LI YTKF +VKKMG I FK G ++
Sbjct: 396 --PSRMHRIARGSGHSVVEVQNLIISYTKFEEIVKKMGKIN--FKAMMQDSSGPAAGHMG 451
Query: 179 QTQMMKLNQQMAKMMDPRVLHQM 201
Q QM Q+AK+++P +L Q+
Sbjct: 452 QQQM----GQLAKLLNPNMLRQI 470
>gi|406860320|gb|EKD13379.1| signal recognition particle protein SRP54 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 525
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDMQGLVEHVQSLKLD-QKDTMKHIAEGVFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
++ SM +LKR++ I DSM ELD+ DG K+F +Q R+TR+A G+G + E
Sbjct: 356 GMMQGMDDDEGSM-KLKRMIYICDSMTAKELDS-DG-KMFIEQPTRMTRIAYGSGTSVHE 412
Query: 144 VKDLISQYTKFAAVVKKMGG-IKGLFKG-GDITKNVNQTQMMKLNQQMA 190
V+DL++Q+ A + KKMGG IK L K G + Q QM + +++A
Sbjct: 413 VEDLLTQHKMMAGMAKKMGGNIKNLQKAQGAMGGGNKQQQMAAMQKRLA 461
>gi|303389022|ref|XP_003072744.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
gi|303301886|gb|ADM11384.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
Length = 466
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 115/179 (64%), Gaps = 9/179 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+EGL++KV L +D+ +E++ K+K G+FTL D Y+QFQ I+ +GP S+++ M+PGFS
Sbjct: 294 MGDVEGLMEKVESLGIDE-KEVVRKLKQGKFTLGDFYDQFQKILSLGPISKLLEMMPGFS 352
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
L ++ES K+L+ I DS++ GELD+ ++F K+ RI RVA+G+G + +
Sbjct: 353 GLSL---PDEES---FKKLIYIFDSLSRGELDST--GQMFEKEPSRIMRVARGSGTSVQG 404
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V ++++Q+ K AV++K+ I G+ +++ TQ KL +Q ++ +L +M
Sbjct: 405 VVEILTQFKKAHAVMQKISSIPGIESMMGNPSSMSLTQKAKLKEQAKNILPKDLLDKMA 463
>gi|336377467|gb|EGO18629.1| hypothetical protein SERLADRAFT_454209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 578
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 21/205 (10%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + +L D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 295 PFISKLLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPI 354
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKL--FSKQ---- 126
S+I MIPG Q+ LS GS++E R+KR++ I DSM ELD+ DGA SK
Sbjct: 355 SKIASMIPGLPQELLS-GSDEEGSLRMKRMIYITDSMTSTELDS-DGAVFMDMSKDGKPV 412
Query: 127 --TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMK 184
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G + +++ +
Sbjct: 413 GLTWRVTRVAKGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAMQKMQSIAGGRGRG 472
Query: 185 LN--------QQMAKMMDPRVLHQM 201
N Q M + M P L QM
Sbjct: 473 ANGMPTPAQIQAMQRAMPPGALQQM 497
>gi|389748926|gb|EIM90103.1| signal recognition particle protein [Stereum hirsutum FP-91666 SS1]
Length = 570
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 101/167 (60%), Gaps = 15/167 (8%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGD++GL++ + +L D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 294 PFISKLLGMGDVQGLMEHMQDLATQNPDRQKEMAKKLEEGKLSIRDWREQIQNVMNMGPI 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ------ 126
S+I MIPG QD L+ G+++E R+KR++ I DSM ELD+ DG+ LF +
Sbjct: 354 SKIASMIPGLPQDMLA-GTDEEGSMRMKRMIYITDSMTSAELDS-DGS-LFLEMGKDGKP 410
Query: 127 ---TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G
Sbjct: 411 VDLTWRVTRVARGSGTSVREVEELLCQYQMMANMAKQAGGKNGWLSA 457
>gi|449547302|gb|EMD38270.1| hypothetical protein CERSUDRAFT_113440 [Ceriporiopsis subvermispora
B]
Length = 571
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 102/165 (61%), Gaps = 13/165 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ +++L D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 294 PFISKLLGLGDVQGLMEHMHDLATQNPDKQKEIAKKLEEGKLSIRDWREQIQNVMNMGPI 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ------ 126
S+I MIPG Q+ + +GS++ES R+KR++ I+DSM ELD+ DG+
Sbjct: 354 SKIASMIPGLPQEMM-QGSDEESSLRMKRMIYIVDSMTSSELDS-DGSPFMEVGKDGKPI 411
Query: 127 --TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK 169
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G +
Sbjct: 412 GLTWRVTRVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQ 456
>gi|395333501|gb|EJF65878.1| signal recognition particle protein [Dichomitus squalens LYAD-421
SS1]
Length = 571
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + ++ D +E+ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 294 PFISKLLGLGDMQGLVEHMQDIATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPL 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS-----KQT 127
S+I MIPG QD L +GS++E R+KR++ I DSM ELD+ DG+ K T
Sbjct: 354 SKIASMIPGLPQDLL-QGSDEEGTLRMKRMIYITDSMTAAELDS-DGSMFMEWGKDGKPT 411
Query: 128 G---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
G R+ RVA+G+G + +EV+DL+ QY A + K+ GG G +
Sbjct: 412 GLTWRVQRVARGSGTSVREVEDLLCQYRMMANMAKQAGGKNGWLQA 457
>gi|219121088|ref|XP_002185775.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582624|gb|ACI65245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 510
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 114/193 (59%), Gaps = 16/193 (8%)
Query: 21 ICCMGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ GD+ GL+D + + E+L+E++ G+FTLR MY+QF+ +M MGP ++++GM+
Sbjct: 307 LLGFGDVRGLMDAMKSVTDSKTQEQLMERMSKGEFTLRMMYQQFEKVMSMGPLNKLVGMM 366
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDN------RDGAKLFSKQTGRITRV 133
PG + KG +Q++ RL++ M +MDSMN+ ELD +D ++ S RI R+
Sbjct: 367 PGMPDYLVPKGGDQQATDRLRKFMIMMDSMNNAELDGKIDMHVKDDPQIES----RIRRI 422
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMK----LNQQM 189
A G+G EVK L+ + +F +V KMG + KG + Q QM K +NQ++
Sbjct: 423 AAGSGSHPNEVKMLLLAHKQFEGMVSKMGKSGLMGKGAQQRQAQLQAQMRKNPNFINQRL 482
Query: 190 AKMMDPRVLHQMG 202
+ MDPR+L QMG
Sbjct: 483 NQ-MDPRMLQQMG 494
>gi|46130818|ref|XP_389140.1| hypothetical protein FG08964.1 [Gibberella zeae PH-1]
Length = 521
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H L+F + + MGD+ GL++ V L L+ ++ I+ I+ G FT+RD+ +Q
Sbjct: 271 HMLDFEKFAPQQFVQKLLGMGDMAGLMEHVQSLNLN-QKDTIKHIQEGIFTVRDLRDQLS 329
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ GMIPG S + + ++E A+LKR++ I DSM D ELD+ DG K+
Sbjct: 330 NIMKMGPLSKMAGMIPGMS-NMMQGMDDEEGGAKLKRMIYICDSMTDKELDS-DG-KILI 386
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
Q R+TR+A+G+G + +EV+DL++Q A + KKMGG
Sbjct: 387 DQPTRMTRIARGSGTSVREVEDLLTQQRMMAGMAKKMGG 425
>gi|302896050|ref|XP_003046905.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727833|gb|EEU41192.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 518
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V L L+ ++ I+ I+ G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 293 MGDMAGLMEHVQSLNLN-QKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 351
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E A+LKR++ I DSM D ELD+ DG K+ Q R+TR+A+G+G + +E
Sbjct: 352 -NMMQGMDDEEGGAKLKRMIYICDSMTDKELDS-DG-KILIDQPSRMTRIARGSGTSVRE 408
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 409 VEDLLTQQRMMAGMAKKMGG 428
>gi|408393475|gb|EKJ72739.1| hypothetical protein FPSE_07139 [Fusarium pseudograminearum CS3096]
Length = 528
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 10/159 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H L+F + + MGD+ GL++ V L L+ ++ I+ I+ G FT+RD+ +Q
Sbjct: 278 HMLDFEKFAPQQFVQKLLGMGDMAGLMEHVQSLNLN-QKDTIKHIQEGIFTVRDLRDQLS 336
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ GMIPG S + + ++E A+LKR++ I DSM D ELD+ DG K+
Sbjct: 337 NIMKMGPLSKMAGMIPGMS-NMMQGMDDEEGGAKLKRMIYICDSMTDKELDS-DG-KILI 393
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
Q R+TR+A+G+G + +EV+DL++Q A + KKMGG
Sbjct: 394 DQPTRMTRIARGSGTSVREVEDLLTQQRMMAGMAKKMGG 432
>gi|342881717|gb|EGU82549.1| hypothetical protein FOXB_06915 [Fusarium oxysporum Fo5176]
Length = 476
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 103/159 (64%), Gaps = 10/159 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H L+F + + MGD+ GL++ V L L+ ++ I+ I+ G FT+RD+ +Q
Sbjct: 278 HMLDFEKFAPQQFVQKLLGMGDMAGLMEHVQSLNLN-QKDTIKHIQEGIFTVRDLRDQLS 336
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ GMIPG S + + ++E A+LKR++ I DSM D ELD+ DG K+
Sbjct: 337 NIMKMGPLSKMAGMIPGMS-NMMQGMDDEEGGAKLKRMIYICDSMTDKELDS-DG-KILI 393
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
+Q R+TR+A+G+G + +EV+DL++Q A + KKMGG
Sbjct: 394 EQPTRMTRIARGSGTSVREVEDLLTQQRMMAGMAKKMGG 432
>gi|453083661|gb|EMF11706.1| signal recognition particle 54 kDa protein [Mycosphaerella
populorum SO2202]
Length = 519
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 107/168 (63%), Gaps = 6/168 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD +E ++ I G+FT+RD+ +Q QNI KMGP S++ GMIPG S
Sbjct: 297 MGDVQGLMEHVQTLKLD-QKETMKNITEGRFTVRDLRDQIQNISKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + E +LKR++ I DSM ELD+ DG K+F Q R+TRVA+G+G + +E
Sbjct: 356 -GMMGGMDDAEGGDKLKRMIIICDSMTQKELDS-DG-KIFVDQPSRVTRVARGSGSSVRE 412
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGLFKGGDITKNVNQ-TQMMKLNQQM 189
V++L++Q A V KK+ GG+ + K NQ +QM + ++M
Sbjct: 413 VEELLAQQKMMAGVAKKVKGGMANMQKAQGALGGANQKSQMAAMQKRM 460
>gi|19074175|ref|NP_584781.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
gi|19068817|emb|CAD25285.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
Length = 466
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 114/179 (63%), Gaps = 9/179 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+EGL++KV L +D+ +E+++K++ G+FTL D Y+QFQ I+ +GP S+++ MIPGFS
Sbjct: 294 MGDVEGLMEKVGSLGIDE-KEVVKKLRQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFS 352
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
LS E K+L+ + DS++ GELD+ ++F K+ RI RVA+G+G + +
Sbjct: 353 G--LSLPDEDT----FKKLIYVFDSLSRGELDST--GQVFEKEPSRIMRVARGSGTSVQG 404
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V ++++Q+ K AV++K+ I G+ +++ Q KL +Q ++ +L +MG
Sbjct: 405 VVEILTQFKKAHAVMQKISSIPGIEGMMGNPSSMSLAQKAKLKEQARNILPKDLLDRMG 463
>gi|449328952|gb|AGE95227.1| signal recognition particle 54kDa subunit [Encephalitozoon
cuniculi]
Length = 466
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 114/179 (63%), Gaps = 9/179 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+EGL++KV L +D+ +E+++K++ G+FTL D Y+QFQ I+ +GP S+++ MIPGFS
Sbjct: 294 MGDVEGLMEKVGSLGIDE-KEVVKKLRQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFS 352
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
LS E K+L+ + DS++ GELD+ ++F K+ RI RVA+G+G + +
Sbjct: 353 G--LSLPDEDT----FKKLIYVFDSLSRGELDST--GQVFEKEPSRIMRVARGSGTSVQG 404
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
V ++++Q+ K AV++K+ I G+ +++ Q KL +Q ++ +L +MG
Sbjct: 405 VVEILTQFKKAHAVMQKISSIPGIEGMMGNPSSMSLAQKAKLKEQARNILPKDLLDRMG 463
>gi|393245418|gb|EJD52928.1| signal recognition particle protein [Auricularia delicata TFB-10046
SS5]
Length = 567
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 102/164 (62%), Gaps = 13/164 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGD++GL++ ++++ + + E E+ +K + G+ ++RD EQ QN+M MGP
Sbjct: 294 PFISKLLGMGDVQGLMEHMHDVAMQNPEKQKEMAKKFEEGKLSIRDWKEQVQNVMSMGPI 353
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLF-----SKQT 127
S+I MIPG Q+ L +GS+++ RLKRL+ I DSM ELD+ DG+ K T
Sbjct: 354 SKIASMIPGLPQEML-EGSDEDGARRLKRLIFITDSMTATELDS-DGSMFMQMGKDGKPT 411
Query: 128 G---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLF 168
G R+TRVA+G+G + +EV++++ QY A + K+ GG KG
Sbjct: 412 GLTWRVTRVAKGSGTSVREVEEVLCQYRMMAHMAKQAGGKKGWL 455
>gi|255082746|ref|XP_002504359.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226519627|gb|ACO65617.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 512
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 10/189 (5%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + +GD GLIDK+N+ + +D EL++K+ GQFT+R +YEQF NI KMGP S
Sbjct: 293 PFVSRLLGLGDWTGLIDKINDVIPMDQQPELMDKLVAGQFTMRILYEQFANIQKMGPMSS 352
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+M MIPG L KG E+ S A++KR+M +MDSM D ELD L + R+ R+
Sbjct: 353 VMSMIPGMD-GMLPKGQEKASQAKIKRMMCLMDSMTDEELDTTSLKIL--QDPKRMERIG 409
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN-QQMAKMM 193
+GAG +V +L+ +Y + + ++ KM +Q M N QQMA +
Sbjct: 410 RGAGRGPGDVVELVEEYKRMSKMMGKM-----KGMKMPKKGGYGHSQAMAQNMQQMAGAI 464
Query: 194 DPRVLHQMG 202
P +L QMG
Sbjct: 465 PPHMLKQMG 473
>gi|169624365|ref|XP_001805588.1| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
gi|160705155|gb|EAT77106.2| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
Length = 533
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 113/179 (63%), Gaps = 6/179 (3%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGD++GL++ V LKLD ++ ++ I G FT++D+ +Q NIMKMGP S++
Sbjct: 289 PFVSKLLGMGDVQGLVEHVQSLKLD-QKDTMKHITQGIFTIKDLRDQLSNIMKMGPLSKM 347
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
GMIPG + + ++E A+LKR++ I DSM + EL++ DG K+F Q R+TR+A+
Sbjct: 348 AGMIPGLG-NMMGGMDDEEGGAKLKRMIYICDSMTEKELES-DG-KMFVDQPTRMTRIAR 404
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKM-GGIKGLFKG-GDITKNVNQTQMMKLNQQMAKM 192
G+G + +EV++L++Q+ A + KKM GG+ + K G + Q Q+ + ++M M
Sbjct: 405 GSGTSVREVEELLTQHRMMAGMAKKMKGGMANMQKAQGAMGGGNKQQQLAAMQKRMQSM 463
>gi|407926155|gb|EKG19125.1| Signal recognition particle SRP54 subunit GTPase [Macrophomina
phaseolina MS6]
Length = 525
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 98/145 (67%), Gaps = 5/145 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD +E ++ I+ G FT+RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDVQGLVEHVQSLKLD-QKETMKHIQEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E +LKR++ I DSM ELD+ DG K F+ + R+TRVA G+G + +E
Sbjct: 356 -GMMGGMDDEEGSLKLKRMIYICDSMTTKELDS-DG-KCFTDEPSRMTRVAMGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMG-GIKGL 167
V++L+SQ + KKMG G+K L
Sbjct: 413 VEELLSQRMLMGGMAKKMGKGMKNL 437
>gi|24473790|gb|AAL55410.1| SRP54-like protein [Leishmania major]
Length = 487
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 22/203 (10%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGDI GL+D + + +D NEE+ ++++ G FT+RDMYE Q
Sbjct: 278 HFEDFDLFNPERFVQKMLGMGDIGGLMDTMRDANIDGNEEVYKRLQDGLFTMRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG +IM M+PG S + G Q+ LK + ++DSM ELD K+ +
Sbjct: 338 NVLKMGSVGKIMEMLPGMSGHAATAG--QQGDIALKGFIHMLDSMTVAELDEVRVKKMMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG------GDITKNVN 178
R+ R+A+G+G + EV++LI YTKF +VKKMG + FK G ++
Sbjct: 396 --PSRMHRIARGSGHSVVEVQNLIISYTKFEEIVKKMGKMN--FKAMMQDSSGPAAGHMG 451
Query: 179 QTQMMKLNQQMAKMMDPRVLHQM 201
Q QM Q+AK+++P +L Q+
Sbjct: 452 QQQM----GQLAKLLNPNMLRQI 470
>gi|157870075|ref|XP_001683588.1| putative signal recognition particle [Leishmania major strain
Friedlin]
gi|68126654|emb|CAJ04436.1| putative signal recognition particle [Leishmania major strain
Friedlin]
Length = 519
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 22/203 (10%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H+ +F L+ + MGDI GL+D + + +D NEE+ ++++ G FT+RDMYE Q
Sbjct: 278 HFEDFDLFNPERFVQKMLGMGDIGGLMDTMRDANIDGNEEVYKRLQDGLFTMRDMYEHLQ 337
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N++KMG +IM M+PG S + G Q+ LK + ++DSM ELD K+ +
Sbjct: 338 NVLKMGSVGKIMEMLPGMSGHAATAG--QQGDIALKGFIHMLDSMTVAELDEVRVKKMMT 395
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG------GDITKNVN 178
R+ R+A+G+G + EV++LI YTKF +VKKMG + FK G ++
Sbjct: 396 --PSRMHRIARGSGHSVVEVQNLIISYTKFEEIVKKMGKMN--FKAMMQDSSGPAAGHMG 451
Query: 179 QTQMMKLNQQMAKMMDPRVLHQM 201
Q QM Q+AK+++P +L Q+
Sbjct: 452 QQQM----GQLAKLLNPNMLRQI 470
>gi|380028787|ref|XP_003698068.1| PREDICTED: uncharacterized protein LOC100872792 [Apis florea]
Length = 1038
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 62/77 (80%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEEL+EKIKHGQFTLRDMYEQFQN+MKMGPFSQ+
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQL 348
Query: 76 MGMIPGFSQDFLSKGSE 92
M + F+ F SK ++
Sbjct: 349 MASLIFFASLFYSKSAK 365
>gi|357455285|ref|XP_003597923.1| Signal recognition particle [Medicago truncatula]
gi|355486971|gb|AES68174.1| Signal recognition particle [Medicago truncatula]
Length = 512
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 26/194 (13%)
Query: 16 PLYCGICCMGDIEGLIDKVN-ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD+ GLIDK++ + +D +L++K+ G FTLR MYEQFQN +KMGP +
Sbjct: 322 PFVSRLLGMGDLSGLIDKIHGVVPMDQQADLVQKLSKGNFTLRIMYEQFQNALKMGPMGE 381
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR------DGAKLFSKQTG 128
++ MIPGFS + + +G E ES A+LK MT+MDSM + + N D +
Sbjct: 382 LVSMIPGFSSELIPQGHENESSAKLKHYMTMMDSMTNEGMHNELIVEDLDSSNPKLINES 441
Query: 129 RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQ 188
R+ R+A+G+G +EV +L+ Y + I K ++ + Q
Sbjct: 442 RMMRIARGSGRLVREVLELMEVYKR-------------------IAKEFSKISRCRNPQD 482
Query: 189 MAKMMDPRVLHQMG 202
M K P +L Q G
Sbjct: 483 MVKSFPPHLLKQFG 496
>gi|302691416|ref|XP_003035387.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
gi|300109083|gb|EFJ00485.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
Length = 573
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 117/212 (55%), Gaps = 21/212 (9%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQN 65
L + P + +GD++GLI+ +++L D +E+ +K + G+ ++RD EQ N
Sbjct: 286 LDRFAPQPFISKLLGLGDMQGLIEHMHDLTAQNPDKQKEMAKKFEQGKLSIRDWREQISN 345
Query: 66 IMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS- 124
+M MGP S+I MIPG + L +GS++E R+KR++ I DSM ELD+ DG+
Sbjct: 346 VMSMGPISKIASMIPGLPAEML-QGSDEEGSLRMKRMIYITDSMTAAELDS-DGSMFMEW 403
Query: 125 ----KQTG---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNV 177
K TG R+TRVA+G+G + KEV++L+ QY A + K+ GG G + ++V
Sbjct: 404 GKDGKPTGLTWRVTRVAKGSGTSVKEVEELLCQYRMMANMAKQAGGKNGWLQTMQKIQSV 463
Query: 178 NQTQMMKLN--------QQMAKMMDPRVLHQM 201
++ + N Q + + M P +L QM
Sbjct: 464 AGSKGLGANGMPTPAQIQAIQRSMPPGMLQQM 495
>gi|18394225|ref|NP_563970.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
gi|586036|sp|P37106.1|SR541_ARATH RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|5103829|gb|AAD39659.1|AC007591_24 Identical to gb|L19997 signal recognition particle 54 kDa subunit
(Srp54-1) from Arabidopsis thaliana. ESTs gb|T88590 and
gb|T20603 come from this gene [Arabidopsis thaliana]
gi|12745001|gb|AAK06880.1|AF344329_1 unknown protein [Arabidopsis thaliana]
gi|304111|gb|AAA19728.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
gi|21592315|gb|AAM64266.1| signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
gi|62320715|dbj|BAD95382.1| putative signal recognition particle 54 kDa subunit [Arabidopsis
thaliana]
gi|332191180|gb|AEE29301.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
Length = 479
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 25/188 (13%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + GD GL+DK+ E+ D EL+E + G FTLR MY+QFQ +++ P +Q
Sbjct: 289 PFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQ 347
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ M+PG S + + KG +ES ++KR MT+MDSM + ELD+ + K+F++ RI R+A
Sbjct: 348 LFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPN-PKIFNE--SRIMRIA 404
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
+G+G +EV +++ +Y + A K M GIK + K GD M+K++
Sbjct: 405 RGSGRLVREVMEMLEEYKRIA---KTMKGIK-IPKNGD----------------MSKVIP 444
Query: 195 PRVLHQMG 202
P++L QMG
Sbjct: 445 PQMLKQMG 452
>gi|414880279|tpg|DAA57410.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 472
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 109/191 (57%), Gaps = 37/191 (19%)
Query: 16 PLYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + MGD G +DK++E + D +L++K+ G F+LR MYEQFQN++KMGP Q
Sbjct: 289 PFVSRLLGMGDWSGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKMGPIGQ 348
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
A++KR MT+MDSM D ELD+ + KL ++ RI R+A
Sbjct: 349 ----------------------AKIKRYMTMMDSMTDAELDSTN-PKLMTE--SRIIRIA 383
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGD---ITKNVNQTQMMKLNQQMAK 191
+G+G ++V D++ +Y + A + KM G+K L K GD +T+N+N QQM+K
Sbjct: 384 RGSGRPVRDVMDMLEEYKRLAKIWGKMKGLK-LQKKGDMSALTRNMNV-------QQMSK 435
Query: 192 MMDPRVLHQMG 202
+ P++L Q+G
Sbjct: 436 ALPPQMLKQIG 446
>gi|451999951|gb|EMD92413.1| hypothetical protein COCHEDRAFT_1193900 [Cochliobolus
heterostrophus C5]
Length = 540
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT++D+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDVQGLVEHVQSLKLD-QKDTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E A+LKR++ I DSM + EL++ DG K+F Q R+TR+A+G+G + +E
Sbjct: 356 -SMMGGMDDEEGGAKLKRMIYICDSMTEKELES-DG-KMFVDQPTRMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V++L++Q+ A + KKM G
Sbjct: 413 VEELLTQHRMMAGMAKKMKG 432
>gi|346321519|gb|EGX91118.1| signal recognition particle 54 kDa protein [Cordyceps militaris
CM01]
Length = 536
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL++ V L L+ ++ ++ I+ G FT+R++ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDIAGLVEHVQSLNLN-QQDTMKNIQEGIFTIRNLRDQLSNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E A+LKR++ I DSM + ELD+ DG K+ Q R+TR+A+G+G + +E
Sbjct: 356 -NMMQGMDDEEGGAKLKRMIYICDSMTEKELDS-DG-KILIDQPTRMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
++DL++Q A +VKKMGG
Sbjct: 413 IEDLLTQQRMMAGMVKKMGG 432
>gi|412992549|emb|CCO18529.1| predicted protein [Bathycoccus prasinos]
Length = 511
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDN-EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + +GD +GL++K++++ +D ++L++ I GQFT+R +YEQFQNI KMGP SQ
Sbjct: 295 PFVSRLLGLGDWQGLMEKLSDVVPEDQGQKLVDGITSGQFTMRLLYEQFQNITKMGPMSQ 354
Query: 75 IMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+M MIPG + D L +GSE+ A++KR++ +MDSM+D ELD + L K+ R+ R+A
Sbjct: 355 VMSMIPGMA-DALPQGSERAGQAKIKRMLCLMDSMSDTELDTCNMKILTDKK--RMIRIA 411
Query: 135 QGAGVTEKEVKDLISQYTKFA 155
+GAG T + +L+ ++ + A
Sbjct: 412 RGAGKTPQAYIELLEEFKRLA 432
>gi|340519181|gb|EGR49420.1| signal recognition particle subunit srp54 [Trichoderma reesei QM6a]
Length = 520
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 105/166 (63%), Gaps = 5/166 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V L L+ ++ ++ ++ G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 290 MGDMAGLVEHVQSLNLN-QKDTMKHLQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 348
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E A+LKR++ I DSM D ELD+ DG KL + R+TR+A+G+G + +E
Sbjct: 349 -GLMQGMDDEEGGAKLKRMIYICDSMTDKELDS-DG-KLLIDEPTRMTRIARGSGTSVRE 405
Query: 144 VKDLISQYTKFAAVVKKMGG-IKGLFKGGDITKNVNQTQMMKLNQQ 188
V+DL++Q A + KKMGG +K + + N+ Q M Q+
Sbjct: 406 VEDLLTQQRMMAGMAKKMGGNMKNMQRAQQAMSGANKAQQMAAMQK 451
>gi|358382412|gb|EHK20084.1| hypothetical protein TRIVIDRAFT_48175 [Trichoderma virens Gv29-8]
Length = 517
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 105/166 (63%), Gaps = 5/166 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V L L+ ++ ++ ++ G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 290 MGDMAGLVEHVQSLNLN-QKDTMKHLQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 348
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E A+LKR++ I DSM D ELD+ DG L + T R+TR+A+G+G + +E
Sbjct: 349 -GLMQGMDDEEGGAKLKRMIYICDSMTDKELDS-DGKILIDEPT-RMTRIARGSGTSVRE 405
Query: 144 VKDLISQYTKFAAVVKKMGG-IKGLFKGGDITKNVNQTQMMKLNQQ 188
V+DL++Q A + KKMGG +K + + N+ Q M Q+
Sbjct: 406 VEDLLTQQRMMAGMAKKMGGNMKNMQRAQQAMSGANKAQQMAAMQK 451
>gi|400597588|gb|EJP65318.1| signal recognition particle protein SRP54 [Beauveria bassiana ARSEF
2860]
Length = 529
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 98/140 (70%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL++ V L L+ ++ ++ I+ G FT+R++ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDIAGLVEHVQSLNLN-QQDTMKNIQEGIFTIRNLRDQLSNIMKMGPLSKMAGMIPGMS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E A+LKR++ I DSM + ELD+ DG K+ ++ R+TR+A+G+G + +E
Sbjct: 356 -NMMQGMDDEEGGAKLKRMIYICDSMTEKELDS-DG-KILIEEPTRMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
++DL++Q A +VKKMGG
Sbjct: 413 IEDLLTQQRMMAGMVKKMGG 432
>gi|396497422|ref|XP_003844973.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
gi|312221554|emb|CBY01494.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
Length = 533
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 111/169 (65%), Gaps = 6/169 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT++D+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDVQGLVEHVQSLKLD-QKDTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM + EL++ DG K+F Q R+TRVA+G+G + +E
Sbjct: 356 -NMMGGMDDEEGGLKLKRMIYICDSMTEKELES-DG-KMFVDQPTRMTRVARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGLFKG-GDITKNVNQTQMMKLNQQMA 190
V++L++Q+ A + KKM GG+ + K G + Q QM + +++A
Sbjct: 413 VEELLTQHRMMAGMAKKMKGGMANMQKAQGAMGGGNKQQQMAAMQKRLA 461
>gi|451854034|gb|EMD67327.1| hypothetical protein COCSADRAFT_83661 [Cochliobolus sativus ND90Pr]
Length = 543
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 97/140 (69%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT++D+ +Q NIMKMGP S++ GMIPG S
Sbjct: 297 MGDVQGLVEHVQSLKLD-QKDTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E A+LKR++ I DSM + EL++ DG K+F Q R+TR+A+G+G + +E
Sbjct: 356 -SMMGGMDDEEGGAKLKRMIYICDSMTEKELES-DG-KMFVDQPTRMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V++L++Q+ A + KKM G
Sbjct: 413 VEELLTQHRMMADMAKKMKG 432
>gi|402697948|gb|AFQ91161.1| signal recognition particle 54kDa, partial [Dendropicos gabonensis]
Length = 81
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 60/81 (74%)
Query: 50 KHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSM 109
KHGQFTLRDMYEQ QNIMKMGPFSQI+GMIPGF F+SKG+E ESMAR M
Sbjct: 1 KHGQFTLRDMYEQXQNIMKMGPFSQILGMIPGFGTXFMSKGNEXESMARXXXXXXXXXXM 60
Query: 110 NDGELDNRDGAKLFSKQTGRI 130
ND ELD+ D A FSKQ GRI
Sbjct: 61 NDQELDSTDXAXXFSKQPGRI 81
>gi|392595811|gb|EIW85134.1| signal recognition particle protein [Coniophora puteana RWD-64-598
SS2]
Length = 571
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 101/166 (60%), Gaps = 13/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ +++L + D +++ +K++ G+ ++RD EQ QN+M MGP
Sbjct: 293 PFISKLLGLGDMQGLMEHMHDLAMQNPDKQKDMAKKLEEGKLSIRDWREQIQNVMNMGPI 352
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ------ 126
S+I MIPG Q+ L+ GS++E R+KR++ I DSM ELD+ DG+
Sbjct: 353 SKIASMIPGLPQELLA-GSDEEGSLRMKRMIYITDSMTAEELDS-DGSMFMEMAKDGKPI 410
Query: 127 --TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G +
Sbjct: 411 GLTWRVTRVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQA 456
>gi|390597902|gb|EIN07301.1| signal recognition particle protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 562
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL---KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + +L D +E+ +K++ G+ ++RD EQ NIM MGP
Sbjct: 293 PFISKLLGLGDMQGLMEHMQDLAQANPDKQKEIAKKLEEGKLSIRDWREQISNIMNMGPI 352
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKL--FSKQ---- 126
S+I MIPG Q+ L+ G E E R+KR++ I DSM ELD+ DG+ F K
Sbjct: 353 SKIASMIPGIPQEMLAGGDE-EGTNRMKRMIFITDSMTASELDS-DGSPFMEFGKDGKPV 410
Query: 127 --TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK--------GGDITKN 176
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G + G +
Sbjct: 411 GITWRVTRVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQTMQKMQQAAGGKGRG 470
Query: 177 VNQTQMMKLNQQMAKMMDPRVLHQM 201
N Q M + M P +L QM
Sbjct: 471 PNGMPTPAQIQAMQRSMPPGMLQQM 495
>gi|388581255|gb|EIM21564.1| signal recognition particle protein [Wallemia sebi CBS 633.66]
Length = 561
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 112/200 (56%), Gaps = 22/200 (11%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGD++GL++ V ++ + D + EL +K + G ++RD EQ +N+ K+GP
Sbjct: 292 PFVQQLLGMGDMQGLLEHVQDVAMSDPDKQKELAKKFEQGSLSIRDWAEQIKNVTKLGPI 351
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDN---------RDGAKLF 123
S+I GMIPG + D + +G + E+ R+KR++ I DSM + ELD+ +DG F
Sbjct: 352 SKIAGMIPGLNADMIGQGGDDEASKRIKRMLFITDSMTEKELDSNGTIFLRKGKDGK--F 409
Query: 124 SKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMM 183
+ R RVA+G+G + +EV++L+ QYT + GI + KG Q M
Sbjct: 410 VGMSRRALRVARGSGTSVREVEELLVQYTMMKS------GILNMMKGQAGGMKPGQPGMP 463
Query: 184 KLN--QQMAKMMDPRVLHQM 201
+ QQM KMM P++L ++
Sbjct: 464 SRDQIQQMQKMMPPQLLQKL 483
>gi|358392739|gb|EHK42143.1| hypothetical protein TRIATDRAFT_31697 [Trichoderma atroviride IMI
206040]
Length = 519
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL++ V L L+ ++ ++ I+ G FT+RD+ +Q NIMKMGP S++ GMIPG S
Sbjct: 290 MGDMAGLVEHVQSLNLN-QKDTMKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMS 348
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E +LKR++ I DSM D ELD+ DG K+F + R+TR+A+G+G + +E
Sbjct: 349 -GLMQGMDDEEGGLKLKRMIYICDSMTDKELDS-DG-KMFIDEPTRMTRIARGSGTSVRE 405
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V+DL++Q A + KKMGG
Sbjct: 406 VEDLLTQQRMMAGMAKKMGG 425
>gi|154316352|ref|XP_001557497.1| hypothetical protein BC1G_04107 [Botryotinia fuckeliana B05.10]
Length = 325
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 109/171 (63%), Gaps = 6/171 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT+RD+ +Q NIMKMGP S++ GMIPG
Sbjct: 93 MGDMQGLMEHVQSLKLD-QKDTMKHIVEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMG 151
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + +++ +LKR++ I DSM ELD+ DG K+F +Q R+TR+A G+G + +E
Sbjct: 152 -NMMQGMDDEDGAMKLKRMIYICDSMTAKELDS-DG-KMFLEQPTRMTRIACGSGTSVRE 208
Query: 144 VKDLISQYTKFAAVVKKMGG-IKGLFKGGDITKNVN-QTQMMKLNQQMAKM 192
++DL++Q+ A + K MGG +K + K N Q QM + +++A M
Sbjct: 209 IEDLLTQHKMMAGMAKTMGGSMKNMQKAQGAMGGANKQQQMAAMQKRLASM 259
>gi|154338231|ref|XP_001565340.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062389|emb|CAM42250.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 566
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 16/185 (8%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI GL+D + + ++ NEE+ ++++ G FT+RDMYE QN++KMG +IM M+PG +
Sbjct: 341 MGDIGGLMDTMRDANINGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMA 400
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ G + + LK + ++DSM ELD K+ + R+ R+A+G+G + E
Sbjct: 401 GHAGAAGQQGD--IALKGFIHMLDSMTVAELDEAKVKKMMT--PSRMHRIARGSGHSVVE 456
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFK------GGDITKNVNQTQMMKLNQQMAKMMDPRV 197
V++LI YTKF +VKKMG I FK G + ++ Q QM Q+AK+++P +
Sbjct: 457 VQNLIISYTKFEEIVKKMGKIN--FKTMMQDSSGPASGHMGQQQM----GQLAKLLNPNM 510
Query: 198 LHQMG 202
L Q+G
Sbjct: 511 LRQIG 515
>gi|156059506|ref|XP_001595676.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980]
gi|154701552|gb|EDO01291.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 528
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 96/141 (68%), Gaps = 6/141 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT+RD+ +Q NIMKMGP S++ GMIPG
Sbjct: 298 MGDMQGLMEHVQSLKLD-QKDTMKHIVEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMG 356
Query: 84 QDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +G + E A +LKR++ I DSM ELD+ DG K+F Q R+TR+A G+G + +
Sbjct: 357 S--MMQGMDDEDGAMKLKRMIYICDSMTAKELDS-DG-KMFIDQPTRMTRIACGSGTSVR 412
Query: 143 EVKDLISQYTKFAAVVKKMGG 163
E++DL++Q+ A + KKMGG
Sbjct: 413 EIEDLLTQHKMMAGMAKKMGG 433
>gi|330933421|ref|XP_003304165.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
gi|311319393|gb|EFQ87728.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
Length = 541
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 110/171 (64%), Gaps = 6/171 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT++D+ +Q NIMKMGP S++ GMIPG
Sbjct: 297 MGDVQGLVEHVQSLKLD-QKDTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLG 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + ++E +LKR++ I DSM + EL++ DG K+F Q R+TR+A+G+G + +E
Sbjct: 356 -NMMGGMDDEEGGMKLKRMIYICDSMTEKELES-DG-KMFVDQPTRMTRIARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGLFKG-GDITKNVNQTQMMKLNQQMAKM 192
V++L++Q+ A + KKM GG+ + K G + Q Q+ + ++M M
Sbjct: 413 VEELLTQHRMMAGMAKKMKGGMASMQKAQGAMGGGNKQQQLAAMQKRMQSM 463
>gi|449018117|dbj|BAM81519.1| signal recognition particle recognition component SRP54
[Cyanidioschyzon merolae strain 10D]
Length = 502
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 108/186 (58%), Gaps = 11/186 (5%)
Query: 24 MGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGD+ GL+ + E L++ +EE + +I G TLRDM Q+ N++++GP S++ M+PG
Sbjct: 297 MGDVRGLVSTIAEADLENPDEEQMNRISQGILTLRDMQMQYSNVLRLGPLSKVASMMPGM 356
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ + L KGSE+++ R++ ++ I+DSMN ELD + R R+A+G+G + +
Sbjct: 357 A-EILPKGSEKDAQTRVRNMLVILDSMNREELDESTSVRW---DDSRKRRIARGSGRSVQ 412
Query: 143 EVKDLISQYTKFAAVVKKMG-GIKGLFKGGDITKNVNQ-----TQMMKLNQQMAKMMDPR 196
EV ++++QY + ++G +K L + G + + QQM +MMDPR
Sbjct: 413 EVDEVLTQYKLISKAWSRIGKNMKHLMQPGHGGVGHGTGPNSIPNIGAMEQQMQRMMDPR 472
Query: 197 VLHQMG 202
+L Q+G
Sbjct: 473 MLQQLG 478
>gi|189206976|ref|XP_001939822.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975915|gb|EDU42541.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 489
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 109/171 (63%), Gaps = 6/171 (3%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V LKLD ++ ++ I G FT++D+ +Q NIMKMGP S++ GMIPG
Sbjct: 245 MGDVQGLVEHVQSLKLD-QKDTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLG 303
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ ++E +LKR++ I DSM + EL++ DG K+F Q R+TR+A+G+G + +E
Sbjct: 304 -SMMGGMDDEEGGMKLKRMIYICDSMTEKELES-DG-KMFVDQPTRMTRIARGSGTSVRE 360
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGLFKG-GDITKNVNQTQMMKLNQQMAKM 192
V++L++Q+ A + KKM GG+ + K G + Q Q+ + ++M M
Sbjct: 361 VEELLTQHRMMAGMAKKMKGGMASMQKAQGAMGGGNKQQQLAAMQKRMQSM 411
>gi|157115970|ref|XP_001652739.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108876679|gb|EAT40904.1| AAEL007400-PA [Aedes aegypti]
Length = 357
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
P + MGDIEGLIDKVNEL LDDNEELI+KIKHGQFT+RDMYEQFQNIMKMGPFSQI
Sbjct: 289 PFISKLLGMGDIEGLIDKVNELNLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 348
Query: 76 MGMIPGFSQDFL 87
M GF F
Sbjct: 349 M---VGFGGSFF 357
>gi|308808356|ref|XP_003081488.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
gi|116059951|emb|CAL56010.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
Length = 559
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 89/132 (67%), Gaps = 5/132 (3%)
Query: 24 MGDIEGLIDKVNELKLDDN-EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGD++GL++K+ E+ +++ E L + I G FT+R +YEQFQN+ MGP S +M M+PG
Sbjct: 356 MGDMKGLVEKMTEIVPEESAERLADAIGSGTFTMRLLYEQFQNLQNMGPISSLMSMVPGM 415
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ D + KGSEQE R+K +M +MDSM D ELD + +K+F + R+ RVA+GAG +
Sbjct: 416 A-DMMPKGSEQEGTKRMKWMMVLMDSMTDAELDAPN-SKIFDAK--RMERVARGAGRSPH 471
Query: 143 EVKDLISQYTKF 154
E+ L+ ++ +
Sbjct: 472 EMITLLEEHKRL 483
>gi|398393398|ref|XP_003850158.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
gi|339470036|gb|EGP85134.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
Length = 523
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 95/140 (67%), Gaps = 4/140 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++GL++ V L+LD ++ ++ I G+F++RD+ +Q QNIMKMGP S++ GMIPG S
Sbjct: 297 MGDMQGLMEHVQSLRLD-QKDTMKNITEGKFSVRDLRDQLQNIMKMGPLSKMAGMIPGLS 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
E+ SM +LKR++ I DSM ELD+ DG K+F Q R+TRVA+G+G + +E
Sbjct: 356 GMMGGMDDEEGSM-KLKRMIYICDSMTVKELDS-DG-KIFVDQPARMTRVARGSGTSVRE 412
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V++L++Q + KKM G
Sbjct: 413 VEELLTQQRMMGNMAKKMKG 432
>gi|402697964|gb|AFQ91169.1| signal recognition particle 54kDa, partial [Testudo hermanni]
Length = 69
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 57/68 (83%)
Query: 36 ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQES 95
ELKLD NE LIEK+KHGQFTLRDMY QFQNI K GPF QI+GMIP F DF+SK +EQES
Sbjct: 2 ELKLDXNEALIEKLKHGQFTLRDMYXQFQNIXKXGPFXQILGMIPXFGTDFMSKXNEQES 61
Query: 96 MARLKRLM 103
ARLK+LM
Sbjct: 62 XARLKKLM 69
>gi|118370390|ref|XP_001018396.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila]
gi|89300163|gb|EAR98151.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila SB210]
Length = 518
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 12/181 (6%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI+G+I V E + ++ + I I GQF++RD Q+++I+K+G +Q M MIPG
Sbjct: 296 LGDIKGMITTVTEAVDMETQGKAIANITKGQFSIRDFQAQYKSILKLGSINQFMSMIPGM 355
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
L K +E+ES+ ++K+ +TIMDSMND ELD + + RI R+A+G+G + +
Sbjct: 356 GNSILDKNNEKESIRKVKKFLTIMDSMNDNELDG-----VVAINPSRIVRIARGSGSSLE 410
Query: 143 EVKDLISQYTKFAAVV-KKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
+V L+ +Y K + V G+ G+I +N NQ + QM +DP+++ M
Sbjct: 411 DVNQLLDEYKKISKVFIGLGKGLGKGGDIGNIMRNPNQ-----IKNQMGAALDPKMIQGM 465
Query: 202 G 202
G
Sbjct: 466 G 466
>gi|294657854|ref|XP_460149.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
gi|199432996|emb|CAG88422.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
Length = 541
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 9/146 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L D+E + IE K G+FTLRD Q N MKMGP + I MIP
Sbjct: 289 IGDIQSLIEHVQSLNLQDDESHKKTIENFKEGKFTLRDFQTQMNNFMKMGPLTNIASMIP 348
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ E+E+ +++K ++ IMDSM ELD+ DG ++F++Q RI RVA+GAG +
Sbjct: 349 GMS-NIMSQVGEEETSSKIKNMIYIMDSMTTKELDS-DG-RIFTQQPERIIRVARGAGCS 405
Query: 141 EKEVKDLISQ---YTKFAAVVKKMGG 163
EV+ ++ Q + A K MGG
Sbjct: 406 AVEVEMVLQQQRMMSAMAVNAKNMGG 431
>gi|300123716|emb|CBK24988.2| unnamed protein product [Blastocystis hominis]
Length = 521
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 22/187 (11%)
Query: 24 MGDIEGLIDKVNE---LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
MGD++GL+ ++ E LK+ NE+ +++I+ G+FT+RDM EQ QN+ K+GP ++M MIP
Sbjct: 298 MGDVKGLVREMKEGGMLKV--NEDTMKRIQKGKFTIRDMGEQLQNVAKLGPLDRVMSMIP 355
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G Q L +G E+E R+KR+M +M+SM D ELD R+ R GAG+
Sbjct: 356 GLPQGMLPQGMEKEGGERMKRMMILMNSMTDAELDGE-----VEMDEKRLRRCCIGAGLL 410
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN-----QQMAKMMDP 195
+E + QY ++ KMG + ++ Q M+ N QQ+ K M+P
Sbjct: 411 PEEGAMFMQQYKAMEQMIGKMG-------KSPLMRDEKMLQQMQRNPQAVMQQLQKTMNP 463
Query: 196 RVLHQMG 202
++L QMG
Sbjct: 464 QMLAQMG 470
>gi|302654843|ref|XP_003019220.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
gi|291182928|gb|EFE38575.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
Length = 504
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 250 LDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 309
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 310 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTASELDG-DG-KVFV 366
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNV 177
Q R+ R+A G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 367 DQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN----- 421
Query: 178 NQTQMMKLNQQMAKM 192
+ QM + ++MA M
Sbjct: 422 KEQQMAAMQKRMAAM 436
>gi|302506196|ref|XP_003015055.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
gi|291178626|gb|EFE34415.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
Length = 504
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 250 LDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 309
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 310 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTASELDG-DG-KVFV 366
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNV 177
Q R+ R+A G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 367 DQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN----- 421
Query: 178 NQTQMMKLNQQMAKM 192
+ QM + ++MA M
Sbjct: 422 KEQQMAAMQKRMAAM 436
>gi|295666878|ref|XP_002793989.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277642|gb|EEH33208.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 530
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ GL++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMAGLVEHVQAVTKDSATAKETYKHITAGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 397 DQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN 451
>gi|255949096|ref|XP_002565315.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592332|emb|CAP98679.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 522
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 104/176 (59%), Gaps = 20/176 (11%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDVAGLVEHVQAMTKDSAGAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
S +++G + E + +L+R++ I DSM ELD DG K F +Q R+ R+A G+G T
Sbjct: 357 LSN--MTQGLDDEDGSLKLRRMVYIFDSMTVAELDG-DG-KNFVEQPSRMVRIAHGSGTT 412
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQ-MMK---LNQQMAKM 192
+EV+DL+SQ+ A + K++GG K K + Q Q MMK NQQMA M
Sbjct: 413 VREVEDLLSQHRMMAGMAKRVGGQK---------KQMQQAQNMMKGGNKNQQMAAM 459
>gi|326469041|gb|EGD93050.1| signal recognition particle 54K protein [Trichophyton tonsurans CBS
112818]
Length = 534
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTASELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNV 177
Q R+ R+A G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 397 DQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN----- 451
Query: 178 NQTQMMKLNQQMAKM 192
+ QM + ++MA M
Sbjct: 452 KEQQMAAMQKRMAAM 466
>gi|327294833|ref|XP_003232112.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
gi|326466057|gb|EGD91510.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
Length = 534
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTASELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNV 177
Q R+ R+A G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 397 DQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN----- 451
Query: 178 NQTQMMKLNQQMAKM 192
+ QM + ++MA M
Sbjct: 452 KEQQMAAMQKRMAAM 466
>gi|315049435|ref|XP_003174092.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
gi|311342059|gb|EFR01262.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
Length = 543
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPQPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTAPELDG-DG-KVFV 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNV 177
Q RI R+A G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 397 DQPTRIVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN----- 451
Query: 178 NQTQMMKLNQQMAKM 192
+ QM + ++MA M
Sbjct: 452 KEQQMAAMQKRMAAM 466
>gi|326480631|gb|EGE04641.1| signal recognition particle protein [Trichophyton equinum CBS
127.97]
Length = 534
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTASELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNV 177
Q R+ R+A G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 397 DQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN----- 451
Query: 178 NQTQMMKLNQQMAKM 192
+ QM + ++MA M
Sbjct: 452 KEQQMAAMQKRMAAM 466
>gi|212535310|ref|XP_002147811.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
gi|210070210|gb|EEA24300.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
Length = 537
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 12/158 (7%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +T+RD E +IMKMGP S+I GMIPG
Sbjct: 297 MGDMAGLVEHVQAITKDSAGAKETYKHISEGIYTIRDFRENITSIMKMGPLSKISGMIPG 356
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
S + + +++ +L+R++ + DSM ELD+ DG KLF +Q RI RVA G+G T
Sbjct: 357 LS-NITAGLDDEDGTMKLRRMIYLFDSMTTAELDS-DG-KLFVEQPSRIVRVACGSGTTV 413
Query: 142 KEVKDLISQYTKFAAVVKKMGG-------IKGLFKGGD 172
+EV+DL+SQ+ A + K++GG + + KGG+
Sbjct: 414 REVEDLLSQHRMMAGMAKRVGGQRKQMQRAQNMLKGGN 451
>gi|226287163|gb|EEH42676.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb18]
Length = 530
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ GL++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMAGLVEHVQAVTKDSATAKETYKHITAGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G T +EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 397 DQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKRVGGQKKQMQRAQSMLKGGN 451
>gi|225683542|gb|EEH21826.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb03]
Length = 500
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 12/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFS 73
P + MGD+ GL++ V + D +E + I G FTLRD E +IMKMGP S
Sbjct: 259 PFIQKLLGMGDMAGLVEHVQAVTKDSATAKETYKHITAGIFTLRDFRENITSIMKMGPLS 318
Query: 74 QIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F Q RI RV
Sbjct: 319 KISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVFIDQPSRIVRV 375
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
A G+G T +EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 376 ACGSGTTVREVEDLLSQHKMMAGMAKRVGGQKKQMQRAQSMLKGGN 421
>gi|242792738|ref|XP_002482016.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
gi|218718604|gb|EED18024.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
Length = 534
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 96/158 (60%), Gaps = 12/158 (7%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S+I GMIPG
Sbjct: 297 MGDMAGLVEHVQAITKDSAGAKETYKHISAGIYTLRDFRENITSIMKMGPLSKISGMIPG 356
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
S + + +++ +L+R++ + DSM ELD+ DG K+F +Q RI R+A G+G T
Sbjct: 357 LS-NITAGLDDEDGTMKLRRMIYLFDSMTTAELDS-DG-KIFVEQPSRIVRIACGSGTTV 413
Query: 142 KEVKDLISQYTKFAAVVKKMGG-------IKGLFKGGD 172
+EV+DL+SQ+ A + K++GG + + KGG+
Sbjct: 414 REVEDLLSQHRMMAGMAKRVGGQRKQMQRAQNMLKGGN 451
>gi|425773702|gb|EKV12037.1| Signal recognition particle protein SRP54 [Penicillium digitatum
Pd1]
gi|425776013|gb|EKV14252.1| Signal recognition particle protein SRP54 [Penicillium digitatum
PHI26]
Length = 523
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 20/176 (11%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDVAGLVEHVQAMTKDSAGAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
S +++G + E + +L+R++ I DSM ELD DG K F +Q R+ R+A G+G T
Sbjct: 357 LSN--MTQGLDDEDGSLKLRRMVYIFDSMTVAELDG-DG-KNFVEQPSRMVRIAHGSGTT 412
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQ-MMK---LNQQMAKM 192
+EV+D++SQ+ A + K++GG K K + Q Q MMK NQQMA M
Sbjct: 413 VREVEDVLSQHRMMAGMAKRVGGQK---------KQMQQAQNMMKGGNKNQQMAAM 459
>gi|159471143|ref|XP_001693716.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
gi|158283219|gb|EDP08970.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
Length = 503
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 114/184 (61%), Gaps = 10/184 (5%)
Query: 25 GDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GD+ GL+DK+ ++ +D + EL++ I G +R + + F++++++GP SQ+M M+PGF+
Sbjct: 302 GDVSGLMDKIQDVIPEDKQPELLDTISKGNVNMRVLKDMFESVLELGPMSQMMSMLPGFN 361
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + KG+++++ ++R +TI++SM D E+D + K+ S +T R+ R+A+G+G T +
Sbjct: 362 SELMPKGNDKQNQMMIRRYITIIESMTDKEMDTTN-IKMLS-ETSRVNRLARGSGSTPAQ 419
Query: 144 VKDLIS---QYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDPRVL 198
V L+ Y+K+A K + KG GD+ +N QM +M++ + P+++
Sbjct: 420 VLALLESYKHYSKYATQALKAANLPKNLKGMKGDV--QMNPRQMQAALGKMSRALPPQLM 477
Query: 199 HQMG 202
Q+G
Sbjct: 478 QQLG 481
>gi|50555115|ref|XP_504966.1| YALI0F03839p [Yarrowia lipolytica]
gi|54042305|sp|Q99150.2|SRP54_YARLI RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|49650836|emb|CAG77773.1| YALI0F03839p [Yarrowia lipolytica CLIB122]
Length = 536
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GD++GL++ + L LD ++ +E I+ G FTL D+ +Q N++KMG S I GMIPG S
Sbjct: 299 IGDLQGLMETMQSLNLD-QKKTMEHIQEGIFTLADLRDQMGNMLKMGSLSSIAGMIPGLS 357
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
S S++E R+KR++ I+DSMN ELD+ DG+ +F + RITRVA+G+G + +E
Sbjct: 358 -GMASSISDEEGTRRIKRMIYILDSMNQKELDS-DGS-IFKEVPSRITRVARGSGTSIRE 414
Query: 144 VKDLISQYTKFAAVVKKMGGIKGL 167
V++++ Q A++ +MGG G+
Sbjct: 415 VEEVLQQQKMMASMASRMGGKNGM 438
>gi|397643867|gb|EJK76129.1| hypothetical protein THAOC_02125 [Thalassiosira oceanica]
Length = 635
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 54/137 (39%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 25 GDIEGLIDKVNELKL-DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GD+ G ++++ L D EE+++ + GQFTLRD+Y+QFQ++ KMGP ++MGM+PG
Sbjct: 309 GDMRGFMEEIKSLNSGKDREEMMKNMAKGQFTLRDLYKQFQSVSKMGPLDRVMGMMPGMP 368
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR-DGAKLFSKQT-GRITRVAQGAGVTE 141
+ + KG + E +L++ + IMDSM+D ELD + D K T RI R+A G+G
Sbjct: 369 EHLIPKGGDDERSKQLRKFLVIMDSMSDKELDGKIDLQKKNDPATEKRIRRIAAGSGCHP 428
Query: 142 KEVKDLISQYTKFAAVV 158
EV+ L+ Q+ + ++V
Sbjct: 429 MEVRALLQQHKQMESMV 445
>gi|119498779|ref|XP_001266147.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
gi|119414311|gb|EAW24250.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
Length = 522
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 97/159 (61%), Gaps = 14/159 (8%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
S L+ G + E + +L+R++ I DSM ELD+ DG K+F +Q R+ R+A G+G T
Sbjct: 357 LSN--LTAGLDDEDGSLKLRRMVYIFDSMTAAELDS-DG-KIFVEQPSRMVRIACGSGTT 412
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 413 VREVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|70984902|ref|XP_747957.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|66845585|gb|EAL85919.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|159126118|gb|EDP51234.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
A1163]
Length = 522
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 97/159 (61%), Gaps = 14/159 (8%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
S L+ G + E + +L+R++ I DSM ELD+ DG K+F +Q R+ R+A G+G T
Sbjct: 357 LSN--LTAGLDDEDGSLKLRRMVYIFDSMTAAELDS-DG-KIFVEQPSRMVRIACGSGTT 412
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 413 VREVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|303319737|ref|XP_003069868.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109554|gb|EER27723.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 530
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLF 123
+IMKMGP S+I MIPG S L+ G + E + +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLSG--LTAGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVF 395
Query: 124 SKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 396 VDQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN 451
>gi|119183283|ref|XP_001242701.1| hypothetical protein CIMG_06597 [Coccidioides immitis RS]
gi|392865609|gb|EAS31408.2| signal recognition particle protein SRP54 [Coccidioides immitis RS]
Length = 530
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLF 123
+IMKMGP S+I MIPG S L+ G + E + +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLSG--LTAGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVF 395
Query: 124 SKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 396 VDQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN 451
>gi|320034158|gb|EFW16103.1| signal recognition particle protein SRP54 [Coccidioides posadasii
str. Silveira]
Length = 530
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHIAEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLF 123
+IMKMGP S+I MIPG S L+ G + E + +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLSG--LTAGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVF 395
Query: 124 SKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G T +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 396 VDQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN 451
>gi|384250211|gb|EIE23691.1| 54-kd signal recognition particle specific protein [Coccomyxa
subellipsoidea C-169]
Length = 485
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 102/186 (54%), Gaps = 25/186 (13%)
Query: 25 GDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
GD G +DK++E +D EEL++ + G FT+R +YEQ NI KMGP Q
Sbjct: 301 GDWRGFVDKISEAVPEDAMKEELMDSLSKGNFTMRILYEQLANIQKMGPVGQ-------- 352
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
G E+ES AR+K MTIMDSM D ELD + K+ +Q+ R+ RVA+GAG
Sbjct: 353 -------GKEKESAARIKMFMTIMDSMTDKELDCPN-PKVLQEQS-RVMRVARGAGCNPY 403
Query: 143 EVKDLISQYTKFAAVVKKMGGI-KGLFKG-----GDITKNVNQTQMMKLNQQMAKMMDPR 196
V +L+ +Y + A++ GG KG + G+ +N M QQM++M+ P+
Sbjct: 404 CVLELLEEYKRIRALIMGPGGKGKGFMQQMSKQMGNSRGAMNPHNMQMNIQQMSRMLPPQ 463
Query: 197 VLHQMG 202
VL QMG
Sbjct: 464 VLKQMG 469
>gi|115433004|ref|XP_001216639.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
gi|114189491|gb|EAU31191.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
Length = 526
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSAAAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
S E SM +L+R++ I DSM ELD DG K+F +Q R+ R+A G+G T
Sbjct: 357 LSNLTAGLDDEDGSM-KLRRMIYIFDSMTASELDG-DG-KVFVEQPSRMVRIACGSGTTV 413
Query: 142 KEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNVNQTQMMKLNQQMA 190
+EV+DL+SQ+ A + K++GG K + KGG+ + Q+ + ++MA
Sbjct: 414 REVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN-----KEQQLAAMQKRMA 464
>gi|302835417|ref|XP_002949270.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
gi|300265572|gb|EFJ49763.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
Length = 505
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 113/184 (61%), Gaps = 10/184 (5%)
Query: 25 GDIEGLIDKVNELKLDDNE-ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
GD+ GL+DK+ ++ +D + EL++ I G T+ + + F++++++GP SQ+M M+PGF+
Sbjct: 302 GDVSGLMDKIQDVIPEDKQPELLDTISKGNVTMSVLKDMFESVLELGPMSQMMSMLPGFN 361
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
D L KG++++S ++R +TI++SM D E+ N K+ ++ R+ R+A+G+G T ++
Sbjct: 362 SDLLPKGNDKQSQMMIRRYITIIESMTDKEM-NTTNIKIL-QEPSRVNRLARGSGSTPQQ 419
Query: 144 VKDLIS---QYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDPRVL 198
V L+ Y+K+A K + K GD+ +N QM + +M++ + P++L
Sbjct: 420 VLALLESYKHYSKYATQALKAANLPKNLKSMKGDV--QMNPRQMQQALGKMSRALPPQLL 477
Query: 199 HQMG 202
Q+G
Sbjct: 478 QQLG 481
>gi|317031653|ref|XP_001393946.2| signal recognition particle protein [Aspergillus niger CBS 513.88]
Length = 533
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 12/158 (7%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
S E SM +L+R++ I DSM ELD DG K+F +Q R+ R+A G+G T
Sbjct: 357 LSNLTAGLDDEDGSM-KLRRMIYIFDSMTAAELDG-DG-KMFVEQPSRMVRIACGSGTTV 413
Query: 142 KEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 414 REVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|402466990|gb|EJW02377.1| signal recognition particle protein SRP54 [Edhazardia aedis USNM
41457]
Length = 466
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 112/185 (60%), Gaps = 18/185 (9%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GDIEGL++KV+ L +D+ + L++K++ G FTL+D Y+QFQ IM +GP I+ MIPG +
Sbjct: 292 LGDIEGLVEKVSSLNIDE-KALMKKVETGTFTLKDFYDQFQQIMSLGPLQNILSMIPGMN 350
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ E++S L++++ I DS++ E+ N DG + F + R+ RVA+G+G + K
Sbjct: 351 NVNM---PEEDS---LRKMVCIFDSLSKNEI-NSDG-RCFEECPSRVLRVARGSGTSYKM 402
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQM-----MKLNQQMAKMMDPRVL 198
V DL++Q+ + ++KKM I G GD+ N + ++M ++ QM M+ +
Sbjct: 403 VYDLLAQFRQITGMMKKMTKIPGF---GDLA-NKDPSKMSLAEKTRMKNQMKGMLPKNIY 458
Query: 199 HQMGE 203
M +
Sbjct: 459 DSMSQ 463
>gi|3334345|sp|Q00179.1|SRP54_ASPNG RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|598061|gb|AAB04946.1| srpA [Aspergillus niger]
gi|134078502|emb|CAK40424.1| signal recognition particle 54K protein homolog srpA-Aspergillus
niger
gi|350640222|gb|EHA28575.1| hypothetical protein ASPNIDRAFT_56880 [Aspergillus niger ATCC 1015]
gi|1586559|prf||2204256A srpA gene
Length = 534
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 12/158 (7%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 298 MGDMAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 357
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
S E SM +L+R++ I DSM ELD DG K+F +Q R+ R+A G+G T
Sbjct: 358 LSNLTAGLDDEDGSM-KLRRMIYIFDSMTAAELDG-DG-KMFVEQPSRMVRIACGSGTTV 414
Query: 142 KEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 415 REVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 452
>gi|225557139|gb|EEH05426.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
G186AR]
Length = 527
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 12/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFS 73
P + MGD+ L++ V + D +E + I G FTLRD E +IMKMGP S
Sbjct: 289 PFIQKLLGMGDMASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLS 348
Query: 74 QIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F Q RI RV
Sbjct: 349 KISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVFVDQPSRIVRV 405
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
A G+G T +EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 406 ACGSGTTVREVEDLLSQHKMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|169776553|ref|XP_001822743.1| signal recognition particle protein [Aspergillus oryzae RIB40]
gi|83771478|dbj|BAE61610.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 527
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 14/159 (8%)
Query: 24 MGDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +T+RD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSVAAKETYKHISEGIYTVRDFRENISSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
S L+ G + E + +L+R++ I DSM ELD+ DG K+F +Q R+ R+A G+G T
Sbjct: 357 LSN--LTAGLDDEDGSLKLRRMIYIFDSMTTAELDS-DG-KVFVEQPSRMVRIACGSGTT 412
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 413 VREVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|239612234|gb|EEQ89221.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
ER-3]
gi|327353181|gb|EGE82038.1| signal recognition particle protein [Ajellomyces dermatitidis ATCC
18188]
Length = 533
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G T +EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 397 DQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKRVGGQKKHMQRAQNMLKGGN 451
>gi|238503263|ref|XP_002382865.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
gi|220691675|gb|EED48023.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
Length = 527
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 14/159 (8%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +T+RD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSAAAKETYKHISEGIYTVRDFRENISSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
S L+ G + E + +L+R++ I DSM ELD+ DG K+F +Q R+ R+A G+G T
Sbjct: 357 LSN--LTAGLDDEDGSLKLRRMIYIFDSMTTAELDS-DG-KVFVEQPSRMVRIACGSGTT 412
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 413 VREVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|261202392|ref|XP_002628410.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
gi|239590507|gb|EEQ73088.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
Length = 530
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G T +EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 397 DQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKRVGGQKKHMQRAQNMLKGGN 451
>gi|296817061|ref|XP_002848867.1| signal recognition particle protein [Arthroderma otae CBS 113480]
gi|238839320|gb|EEQ28982.1| signal recognition particle protein [Arthroderma otae CBS 113480]
Length = 535
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + D +E + I G FTLRD E
Sbjct: 280 LDLERFAPQPFIQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
+IMKMGP S+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLS-NLTSGLDDEDGSLKLRRMIYIFDSMTASELDG-DG-KVFI 396
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKG-LFKGGDITKNVNQTQMM 183
Q RI R+A G+G T +EV+DL+SQ+ A + KK+GG K + + ++ K N+ Q M
Sbjct: 397 DQPTRIVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGSNKEQQM 456
Query: 184 KLNQQ 188
Q+
Sbjct: 457 AAMQK 461
>gi|67902518|ref|XP_681515.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|40739794|gb|EAA58984.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|259481033|tpe|CBF74199.1| TPA: hypothetical protein similar to srpA gene product (Broad)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 12/158 (7%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 304 MGDMAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 363
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
S E SM +L+R++ I DSM+ ELD+ DG K+F Q R+ R+A G+G +
Sbjct: 364 LSNLTAGLDDEDGSM-KLRRMIYIFDSMSAVELDS-DG-KIFDTQPSRMVRIAHGSGTSV 420
Query: 142 KEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 421 REVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 458
>gi|353227294|emb|CCA77807.1| probable signal recognition particle subunit SRP54 [Piriformospora
indica DSM 11827]
Length = 563
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 17/170 (10%)
Query: 16 PLYCGICCMGDIEGLIDKVNEL---KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGD+ GL++ +++L D +E+ + + G+ ++RD EQ QNIM MGP
Sbjct: 293 PFISQLLGMGDLRGLMEHMSDLARQNPDRQKEMTKAFEEGKLSIRDWREQMQNIMSMGPL 352
Query: 73 SQIMGMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLF------ 123
S+I IPG + + +G+++E+ RLKRL+ I DSM ELD+ DG LF
Sbjct: 353 SKITSKIPGMAGLMEGLAGEGTDEEASRRLKRLICITDSMTPAELDS-DGM-LFLRIGKD 410
Query: 124 SKQTG---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
+K TG R+ RVA+G+G + +EV++++ Q+ A V K+MGG G+ +
Sbjct: 411 NKPTGVTKRVLRVAKGSGASVREVEEVLMQHRMMANVAKQMGGKNGMLQA 460
>gi|121718228|ref|XP_001276141.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
gi|119404339|gb|EAW14715.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
Length = 524
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 14/159 (8%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +T+RD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSAAAKETYKHIAEGIYTVRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
S L+ G + E + +L+R++ I DSM ELD DG K+F +Q R+ RVA G+G T
Sbjct: 357 LSN--LTAGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVFVEQPSRMVRVACGSGTT 412
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 413 VREVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|406606416|emb|CCH42190.1| Signal recognition particle subunit SRP54 [Wickerhamomyces
ciferrii]
Length = 533
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 92/141 (65%), Gaps = 4/141 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GDI+GL++ V L LD N++ ++ ++ G+FTL D +Q QNIMKMGP SQI MIPG
Sbjct: 297 IGDIQGLMEHVQSLDLD-NKDTMKNLQEGKFTLNDFQKQMQNIMKMGPLSQIANMIPGMG 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
Q L + E E+ ++KR++ IMDSM ELD+ DG ++F + RI RVAQG+G + E
Sbjct: 356 Q-MLGQVGEDEASNKMKRMVYIMDSMTKKELDS-DG-QIFINEPTRIIRVAQGSGTSATE 412
Query: 144 VKDLISQYTKFAAVVKKMGGI 164
V+ ++ Q A + ++ G+
Sbjct: 413 VEMILMQQRMMATMAQRTKGM 433
>gi|145514351|ref|XP_001443086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410447|emb|CAK75689.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 17/185 (9%)
Query: 24 MGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI L V ++ + D +LI+K+K G+F++RD+ QF +++K+G +Q M IPG
Sbjct: 296 LGDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIRDLQTQFNSVLKLGSLNQFMSAIPGM 355
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
LSKG+E+ES+ R++R + IM+SM ELD +G F RI R+A+G+G + +
Sbjct: 356 GSSVLSKGNEKESIKRIQRFLCIMNSMTADELDG-EGNLNFC----RIVRIAKGSGTSIE 410
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN-----QQMAKMMDPRV 197
EV L+ ++ K + VV G + GG K N+ + +K N Q+M +DP +
Sbjct: 411 EVHILLDEHKKLSKVV---GNLAKTNLGG---KRGNEFEQLKRNPQQMMQKMKGAIDPSM 464
Query: 198 LHQMG 202
L ++G
Sbjct: 465 LQKLG 469
>gi|145503400|ref|XP_001437676.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404829|emb|CAK70279.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 17/185 (9%)
Query: 24 MGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI L V ++ + D +LI+K+K G+F++RD+ QF +++K+G +Q M IPG
Sbjct: 296 LGDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIRDLQTQFNSVLKLGSLNQFMSAIPGM 355
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
LSKG+E+ES+ R++R + IM+SM ELD +G F RI R+A+G+G + +
Sbjct: 356 GSSVLSKGNEKESIKRIQRFLCIMNSMTADELDG-EGNLNFC----RIVRIAKGSGTSIE 410
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLN-----QQMAKMMDPRV 197
EV L+ ++ K + VV G + GG K N+ + +K N Q+M +DP +
Sbjct: 411 EVHILLDEHKKLSKVV---GNLAKTNLGG---KRGNEFEQLKRNPQQMMQKMKGAIDPSM 464
Query: 198 LHQMG 202
L ++G
Sbjct: 465 LQKLG 469
>gi|240277685|gb|EER41193.1| signal recognition particle protein [Ajellomyces capsulatus H143]
gi|325093770|gb|EGC47080.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
H88]
Length = 527
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 12/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFS 73
P + MGD+ L++ V + D +E + I G FTLRD E +IMKMGP S
Sbjct: 289 PFIQKLLGMGDMASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLS 348
Query: 74 QIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
+I MIPG S + S +++ +L+R++ I DSM ELD DG K+F Q RI RV
Sbjct: 349 KISSMIPGLS-NITSGLDDEDGSLKLRRMIYIFDSMTATELDG-DG-KVFVDQPSRIVRV 405
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
A G+G T +EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 406 ACGSGTTVREVEDLLSQHKMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|358371589|dbj|GAA88196.1| signal recognition particle 54K protein homolog (SrpA) [Aspergillus
kawachii IFO 4308]
Length = 534
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 12/158 (7%)
Query: 24 MGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL++ V + D +E + I G +TLRD E +IMKMGP S++ GMIPG
Sbjct: 297 MGDMAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPG 356
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
S E SM +L+R++ I DSM ELD DG K F +Q R+ R+A G+G T
Sbjct: 357 LSNLTAGLDDEDGSM-KLRRMIYIFDSMTAAELDG-DG-KNFVEQPSRMVRIACGSGTTV 413
Query: 142 KEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
+EV+DL+SQ+ A + K++GG K + KGG+
Sbjct: 414 REVEDLLSQHRMMAGMAKRVGGQKKQMQRAQNMLKGGN 451
>gi|1147795|gb|AAC49735.1| Srp54p [Yarrowia lipolytica]
Length = 536
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 95/144 (65%), Gaps = 4/144 (2%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GD++GL++ + L LD ++ +E I+ G FTL D+ +Q N++KMG S I GMIPG S
Sbjct: 299 IGDLQGLMETMQSLNLD-QKKTMEHIQEGIFTLADLRDQMGNMLKMGSLSSIAGMIPGLS 357
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
S S++E R+KR++ I+DSMN ELD+ DG+ +F + RITRVA+G+ + +E
Sbjct: 358 -GMASSISDEEGTRRIKRMIYILDSMNQKELDS-DGS-IFKEVPSRITRVARGSETSIRE 414
Query: 144 VKDLISQYTKFAAVVKKMGGIKGL 167
V++++ Q A++ +MGG G+
Sbjct: 415 VEEVLQQQKMMASMASRMGGKNGM 438
>gi|320583360|gb|EFW97575.1| Signal recognition particle protein [Ogataea parapolymorpha DL-1]
Length = 530
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 100/170 (58%), Gaps = 15/170 (8%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
+GDI+GL++ V L LD ++ I+ + G+FTLRD+ Q NI+KMGP S+I M+PG
Sbjct: 297 IGDIQGLMEHVQSLNLD-QKDTIKNFQEGKFTLRDLQTQMNNILKMGPLSKIAQMLPGGI 355
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ +++ E+E+ R KR++ +MDSM ELD+ DG +F Q RI RVA+G+G + E
Sbjct: 356 GEMMNQVGEEETSKRFKRMVYVMDSMTKQELDS-DG-DIFVDQPSRIVRVARGSGTSVTE 413
Query: 144 VKDLISQ---YTKFAAVVKKM---------GGIKGLFKGGDITKNVNQTQ 181
V+ ++ Q + + A K M GG G+F ++ + + Q Q
Sbjct: 414 VEAVLMQQKMFARMAQTTKSMQQGGANPMAGGRGGMFNPQNMQRAMQQMQ 463
>gi|440492796|gb|ELQ75334.1| Signal recognition particle, subunit Srp54 [Trachipleistophora
hominis]
Length = 468
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 109/181 (60%), Gaps = 12/181 (6%)
Query: 25 GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQ 84
GD+EGL +K+ +LK+D+ E++ KIK G++TL+D Q Q +M +GP S++M MIPG
Sbjct: 295 GDLEGLAEKIKDLKIDE-REIVNKIKSGKYTLKDFNLQLQQLMSLGPLSKVMEMIPGMGN 353
Query: 85 DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEV 144
+S L++++ I DSM + EL + DG ++ K+T R+TR+A+G+G + V
Sbjct: 354 LPIS------DEGVLRKMVCIFDSMTEKELGS-DG-EILKKETTRVTRIAKGSGTRPELV 405
Query: 145 KDLISQYTKFAAVVKKMGGIKGLFK--GGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
L++Q+ + ++KK+G +G D +K ++ ++ KL QQ + V++QM
Sbjct: 406 LQLVAQFEMMSNLMKKLGNNQGFMNLLNADTSK-MSASEKAKLKQQATGFLPKNVINQME 464
Query: 203 E 203
E
Sbjct: 465 E 465
>gi|294889453|ref|XP_002772820.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239877370|gb|EER04636.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 508
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 108/181 (59%), Gaps = 8/181 (4%)
Query: 24 MGDIEGLIDKV-NELKLDDNEELIEKIKHGQ-FTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGD+ GL D + N + +D+ ++ +E+++ G+ FTLRD+Y Q Q +M MG S+++ M+PG
Sbjct: 302 MGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYSQLQAVMNMGSMSKMLSMLPG 361
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
L S++ S+ R+KR + +MDS+ E+D+ AK ++ T RI R+++G+G
Sbjct: 362 MGGSSLPTMSDEASVKRIKRFLVMMDSLTAAEMDS---AKPITEGT-RIMRISRGSGSHP 417
Query: 142 KEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
V +LI ++ K ++++MG L K GD+T V Q ++ ++ +D L +M
Sbjct: 418 YAVIELIEEHKKMQKMLQRMGKTGLLSKAGDLTNMVRNPQ--QVISKLKASVDHDTLAKM 475
Query: 202 G 202
G
Sbjct: 476 G 476
>gi|258571053|ref|XP_002544330.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
gi|237904600|gb|EEP79001.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
Length = 539
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 14/176 (7%)
Query: 7 LMLCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQ 64
L L + P + MGD+ L++ V + +E + I G FTLRD E
Sbjct: 280 LDLERFAPKPFIQKLLGMGDMASLVEHVQAVTQGSAGAKETYKHISEGIFTLRDFRENIT 339
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLF 123
+IMKMGP S+I MIPG S L+ G + E + +L+R++ I DSM ELD DG K+F
Sbjct: 340 SIMKMGPLSKISSMIPGLSG--LTAGLDDEDGSLKLRRMIYIFDSMTAAELDG-DG-KVF 395
Query: 124 SKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGD 172
Q RI RVA G+G + +EV+DL+SQ+ A + KK+GG K + KGG+
Sbjct: 396 VDQPSRIVRVAYGSGTSVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGN 451
>gi|378727694|gb|EHY54153.1| signal recognition particle protein [Exophiala dermatitidis
NIH/UT8656]
Length = 526
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 17/186 (9%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFS 73
P + GD+ GLI+++ + + +E + + G FTLRDM EQ NIMKMGP S
Sbjct: 292 PFISKLLGYGDMSGLIEQIQSITRESAGMKETQKHLAEGIFTLRDMKEQITNIMKMGPLS 351
Query: 74 QIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
++ GMIPG + S+++ +LKR++ I DSM ELD+ DG L S Q R+ R+
Sbjct: 352 RVAGMIPGLG-SMMQGMSDEDGTEKLKRMIYIYDSMTAKELDS-DGKILIS-QPSRMVRI 408
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGIK-------GLFKGGDITKNVNQTQMMKLN 186
A G+G + ++V++L++Q+ A++ K MG K + +GG+ + QM +
Sbjct: 409 ACGSGTSVRDVEELLTQHKVMASLAKNMGAQKKNMQRAQSMMQGGNKAQ-----QMAAMQ 463
Query: 187 QQMAKM 192
++MA M
Sbjct: 464 KRMASM 469
>gi|255722509|ref|XP_002546189.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
gi|240136678|gb|EER36231.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
Length = 555
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 6/139 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+GLI+ V L L +E + IE IK G+FTL+D Q N +KMGP + I MIP
Sbjct: 314 IGDIQGLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQMNNFLKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + LS+ ++E+ ++K ++ IMDSM EL++ DG ++F K+ RI RVA+GAG
Sbjct: 374 GMS-NLLSQVGDEETSKKIKNMIYIMDSMTTKELES-DG-RIFIKEPSRIIRVARGAGCA 430
Query: 141 EKEVKDLISQYTKFAAVVK 159
EV+ ++ Q+ + + K
Sbjct: 431 AVEVEMILQQHRMMSTMAK 449
>gi|448081661|ref|XP_004194943.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359376365|emb|CCE86947.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 551
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L D+E + +E K G+FTLRD Q N MKMGP + I MIP
Sbjct: 317 IGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQTQMNNFMKMGPLTNIASMIP 376
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ E+E+ +++K ++ IMDSM ELD+ DG ++F + RI RVA+GAG
Sbjct: 377 GMS-NIMSQVGEEETSSKIKNMIYIMDSMTTKELDS-DG-RIFIDEPERIVRVARGAGCA 433
Query: 141 EKEVKDLISQ---YTKFAAVVKKMGGIKGLFKGG 171
EV+ ++ Q + AA K M +G GG
Sbjct: 434 VVEVEMVLQQQRLMSSMAASAKTMNAGQGPQAGG 467
>gi|238614712|ref|XP_002398746.1| hypothetical protein MPER_00599 [Moniliophthora perniciosa FA553]
gi|215475914|gb|EEB99676.1| hypothetical protein MPER_00599 [Moniliophthora perniciosa FA553]
Length = 144
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 85/137 (62%), Gaps = 12/137 (8%)
Query: 40 DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARL 99
D +E+ +K++ G+ ++RD EQ QN+M MGP S+I MIPG Q+ L +GS++E R+
Sbjct: 10 DKQKEMAKKLEDGKLSIRDWREQIQNVMNMGPISKIASMIPGLPQELL-QGSDEEGTLRM 68
Query: 100 KRLMTIMDSMNDGELDN---------RDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQ 150
KR++ I DSM ELD+ +DG + T R+TRVA+G+G + +EV++L+ Q
Sbjct: 69 KRMIFITDSMTAMELDSDGTPFMEMGKDGKPI--GLTWRVTRVARGSGTSVREVEELLCQ 126
Query: 151 YTKFAAVVKKMGGIKGL 167
Y A + K+ GG G
Sbjct: 127 YRMMANMAKQAGGKNGW 143
>gi|443926065|gb|ELU44808.1| signal recognition particle protein [Rhizoctonia solani AG-1 IA]
Length = 597
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGD++GL++ + ++ + D ++E+ +K++ G+ ++RD EQ N+M MGP
Sbjct: 300 PFISKMLGMGDMQGLMETIQDMAMSNPDKHKEMAKKLEEGKLSIRDWREQISNVMSMGPI 359
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSK-----QT 127
S++ MIPG + L +G ++E R+KR++ I DSM ELD+ DG + T
Sbjct: 360 SKLASMIPGLPAELL-QGGDEEGSRRMKRMLFITDSMTAEELDS-DGMIFLERGPDGTPT 417
Query: 128 G---RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
G R+ RVA+G+G +EV++ ++QY A + K GG G
Sbjct: 418 GLSRRVLRVARGSGTNVREVEETLTQYRMMANMAKAAGGKNGWMSA 463
>gi|238879597|gb|EEQ43235.1| signal recognition particle 54 kDa protein [Candida albicans WO-1]
Length = 556
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+GLI+ V L L +E + IE IK G+FTLRD Q N +KMGP + I MIP
Sbjct: 314 IGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQMNNFLKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ ++E+ ++K ++ IMDSM EL++ DG ++F K+ RI RVA+G+G
Sbjct: 374 GLS-NIMSQVGDEETSKKIKNMIYIMDSMTTKELES-DG-RIFIKEPSRIVRVARGSGCA 430
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKG 166
EV+ ++ Q+ + + K +G
Sbjct: 431 VVEVEMILQQHRMMSTMAKSAMAAQG 456
>gi|294948604|ref|XP_002785803.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239899911|gb|EER17599.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 506
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 108/181 (59%), Gaps = 8/181 (4%)
Query: 24 MGDIEGLIDKV-NELKLDDNEELIEKIKHGQ-FTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
+GD+ GL D + N + +D+ ++ +E+++ G+ FTLRD+Y Q Q +M MG S+++ M+PG
Sbjct: 300 IGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYSQLQAVMNMGSMSKMLSMLPG 359
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
L S++ S+ R+KR + +MDS+ E+D+ AK ++ T RI R+++G+G
Sbjct: 360 MGGSSLPTMSDEASVKRIKRFLVMMDSLTAAEMDS---AKPITEGT-RIMRISRGSGSHP 415
Query: 142 KEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
V +LI ++ K ++++MG L K GD+T V Q ++ ++ +D L +M
Sbjct: 416 YAVIELIEEHKKMQKMLQRMGKTGLLSKAGDLTNMVRNPQ--QVISKLKASVDHDTLAKM 473
Query: 202 G 202
G
Sbjct: 474 G 474
>gi|58267554|ref|XP_570933.1| Signal recognition particle 54 kDa protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134112227|ref|XP_775089.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257741|gb|EAL20442.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227167|gb|AAW43626.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 591
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 13/170 (7%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNEL---KLDDNEELIEKIKHGQFTLRDMYEQFQN 65
L + P + MGD++GL++ + ++ D ++L +K++ G+FT+RD EQ N
Sbjct: 288 LERFAPQPFISKLLGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIRDWREQLSN 347
Query: 66 IMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS- 124
IM MG S+I MIPG + G+E+E+ A+LKRL+ I D+M ELD+ DG+ S
Sbjct: 348 IMNMGSISKIASMIPGLPAGIMD-GNEEEASAKLKRLIFITDAMRADELDS-DGSIFVSY 405
Query: 125 -KQ------TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGL 167
KQ R RVA+G+G + +E++DL+ Q A + K+ GG G
Sbjct: 406 DKQGNPVGLNKRAKRVAKGSGTSLRELEDLLVQARMMAGMAKQAGGQNGW 455
>gi|388853536|emb|CCF52935.1| probable SRP54-signal recognition particle subunit [Ustilago
hordei]
Length = 646
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 43/197 (21%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL----DDNEELIEKI-KHGQFTLRDMYEQFQNIMKMG 70
P + MGDI GL+DK+ E+++ + +E+++KI + G F++RD EQ NIM MG
Sbjct: 316 PFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGEGGVFSIRDWREQLSNIMGMG 375
Query: 71 PFSQIMGMIPGFSQDFLSKGSEQESM-ARLKRLMTIMDSMNDGELDN------------R 117
P S+I GMIPG Q G + E+ ++KR+M I D+M ELD+ +
Sbjct: 376 PLSKIAGMIPGMGQMLSGAGGDDEAAGGKMKRMMFITDAMTAEELDSDGRLFYAPIRSKK 435
Query: 118 DGAKLFSKQ-------------------------TGRITRVAQGAGVTEKEVKDLISQYT 152
A + SKQ T R RVA+G+G + KEV++ + QY
Sbjct: 436 PPAPVESKQVAIAESSTAAGRAKKKKKPLQKVRMTARARRVARGSGTSVKEVEEFLMQYR 495
Query: 153 KFAAVVKKMGGIKGLFK 169
++VKKMGG G +
Sbjct: 496 MVGSMVKKMGGKDGFLR 512
>gi|401882649|gb|EJT46899.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 566
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 14/155 (9%)
Query: 16 PLYCGICCMGDIEGLIDKVNELK---LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGDI+GL++ + ++ D ++L +K+ G+FT+RD +Q NIM MG
Sbjct: 295 PFISKLLGMGDIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIRDWKDQLSNIMNMGSL 354
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITR 132
S+I M+PG S + +G E+E+ A+LKR++ I D+M ELD+ G I R
Sbjct: 355 SKIASMVPGMS-GMMEQGGEEEAAAKLKRMIFITDAMRTDELDS----------DGLIFR 403
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGL 167
VAQG+G + +EV++L++Q A + ++ GG G
Sbjct: 404 VAQGSGTSVREVEELLAQARMMAGMARQAGGQNGW 438
>gi|406700686|gb|EKD03851.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 557
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 14/155 (9%)
Query: 16 PLYCGICCMGDIEGLIDKVNELK---LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGDI+GL++ + ++ D ++L +K+ G+FT+RD +Q NIM MG
Sbjct: 286 PFISKLLGMGDIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIRDWKDQLSNIMNMGSL 345
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITR 132
S+I M+PG S + +G E+E+ A+LKR++ I D+M ELD+ G I R
Sbjct: 346 SKIASMVPGMS-GMMEQGGEEEAAAKLKRMIFITDAMRTDELDS----------DGLIFR 394
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGL 167
VAQG+G + +EV++L++Q A + ++ GG G
Sbjct: 395 VAQGSGTSVREVEELLAQARMMAGMARQAGGQNGW 429
>gi|19075709|ref|NP_588209.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe 972h-]
gi|134887|sp|P21565.1|SRP54_SCHPO RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|5096|emb|CAA35951.1| signal recognition particle [Schizosaccharomyces pombe]
gi|173491|gb|AAA35344.1| signal recognition particle 54 kDa subunit [Schizosaccharomyces
pombe]
gi|4678686|emb|CAB41226.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe]
Length = 522
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 87/128 (67%), Gaps = 3/128 (2%)
Query: 41 DNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLK 100
D + +++ ++ G+FT+RD +Q NIMK+GP S++ MIPG S + ++ +++E R+K
Sbjct: 313 DKKNMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMS-NMMNGMNDEEGSLRMK 371
Query: 101 RLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R++ I+DSM + ELD+ DG LF +Q R+ RVA+G+G + EV++ ISQ FA + KK
Sbjct: 372 RMLYIVDSMTEQELDS-DGL-LFVEQPSRVLRVARGSGTSVLEVEETISQVRVFAQMAKK 429
Query: 161 MGGIKGLF 168
+GG G+
Sbjct: 430 IGGKDGIL 437
>gi|321259271|ref|XP_003194356.1| signal recognition particle 54 kDa protein [Cryptococcus gattii
WM276]
gi|317460827|gb|ADV22569.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
gattii WM276]
Length = 590
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 95/170 (55%), Gaps = 13/170 (7%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELK---LDDNEELIEKIKHGQFTLRDMYEQFQN 65
L + P + MGD++GL++ + ++ D ++L +K++ G+FT+RD EQ N
Sbjct: 288 LERFAPQPFISKLLGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIRDWREQLSN 347
Query: 66 IMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSK 125
IM MG S+I MIPG + G+E+E+ A+LKRL+ I D+M ELD+ DG+ S
Sbjct: 348 IMNMGSISKIASMIPGLPAGIMD-GNEEEASAKLKRLIFITDAMRADELDS-DGSIFVSY 405
Query: 126 Q--------TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGL 167
R RVA+G+G + +E++DL+ Q A + K+ GG G
Sbjct: 406 DKEGNPVGLNKRAKRVAKGSGTSLRELEDLLVQARMMAGMAKQAGGQNGW 455
>gi|448086145|ref|XP_004196030.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359377452|emb|CCE85835.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 556
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 9/149 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L D+E + +E K G+FTLRD Q N MKMGP + I MIP
Sbjct: 317 IGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQTQMNNFMKMGPLTNIASMIP 376
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ E+E+ +++K ++ IMDSM ELD+ DG ++F + RI RVA+GAG
Sbjct: 377 GMS-NIMSQVGEEETSSKIKNMIYIMDSMTTKELDS-DG-RIFIDEPERIVRVARGAGCA 433
Query: 141 EKEVKDLISQ---YTKFAAVVKKMGGIKG 166
EV+ ++ Q + AA K M +G
Sbjct: 434 VVEVEMVLQQQRLMSSMAASAKTMNAGQG 462
>gi|68475987|ref|XP_717934.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
gi|68476118|ref|XP_717868.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439602|gb|EAK98918.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439670|gb|EAK98985.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
Length = 556
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+GLI+ V L L +E + IE IK G+FTLRD Q N +KMGP + I MIP
Sbjct: 314 IGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQMNNFLKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ ++E+ ++K ++ IMDSM EL++ DG ++F K+ RI RVA+G+G
Sbjct: 374 GLS-NIMSQVGDEETSKKIKNMIYIMDSMTIKELES-DG-RIFIKEPSRIVRVARGSGCA 430
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKG 166
EV+ ++ Q+ + + K +G
Sbjct: 431 VVEVEMILQQHRMMSTMAKSAMAAQG 456
>gi|3334344|sp|O42816.1|SRP54_CANAL RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|2739331|emb|CAA10999.1| Srp54 protein [Candida albicans]
Length = 556
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+GLI+ V L L +E + IE IK G+FTLRD Q N +KMGP + I MIP
Sbjct: 314 IGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQMNNFLKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ ++E+ ++K ++ IMDSM EL+ DG ++F K+ RI RVA+G+G
Sbjct: 374 GLS-NIMSQVGDEETSKKIKNMIYIMDSMTTKELEC-DG-RIFIKEPSRIVRVARGSGCA 430
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKG 166
EV+ ++ Q+ + + K +G
Sbjct: 431 VVEVEMILQQHRMMSTMAKSAMAAQG 456
>gi|405120876|gb|AFR95646.1| signal recognition particle protein [Cryptococcus neoformans var.
grubii H99]
Length = 587
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 97/170 (57%), Gaps = 13/170 (7%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELK---LDDNEELIEKIKHGQFTLRDMYEQFQN 65
L + P + MGD++GL++ + ++ D ++L +K++ G+F++RD EQ N
Sbjct: 288 LERFAPQPFISKLLGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFSIRDWREQLSN 347
Query: 66 IMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS- 124
IM MG S+I MIPG + G+E+E+ A+LKRL+ I D+M ELD+ DG+ S
Sbjct: 348 IMNMGSISKIASMIPGLPAGIMD-GNEEEASAKLKRLIFITDAMRADELDS-DGSIFVSY 405
Query: 125 -KQ------TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGL 167
KQ R RVA+G+G + +E++DL+ Q A + K+ GG G
Sbjct: 406 DKQGNPVGLNKRAKRVAKGSGTSLRELEDLLVQARMMAGMAKQAGGQNGW 455
>gi|448508734|ref|XP_003865992.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
gi|380350330|emb|CCG20551.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
Length = 554
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 8/175 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L +E + IE IK G+FTL+D Q N MKMGP + I MIP
Sbjct: 314 IGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQMNNFMKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S +S+ E+E+ +++ ++ IMDSM EL++ DG ++F K+ RI R+A+G+G +
Sbjct: 374 GMS-GLMSQVGEEETSNKIRNMIFIMDSMTTKELES-DG-RIFIKEPSRIVRIARGSGCS 430
Query: 141 EKEVKDLISQYTKFAAVVKK--MGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMM 193
EV+ ++ Q+ +++ K +G GG + N +MM+ Q M
Sbjct: 431 VVEVEMILQQHRMMSSMAKSAVAAQAQGGQPGGPFSGNPQMQRMMQSAQSNPNFM 485
>gi|443894400|dbj|GAC71748.1| signal recognition particle, subunit Srp54 [Pseudozyma antarctica
T-34]
Length = 645
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 45/197 (22%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEE----LIEKIKHGQ-FTLRDMYEQFQNIMKMG 70
P + MGDI GL+DK+ E++++ +E +++KI+ G F++RD EQ NIM MG
Sbjct: 316 PFISKLLGMGDITGLMDKMEEMQMNGGQERQREMLKKIEEGGIFSIRDWREQLSNIMGMG 375
Query: 71 PFSQIMGMIPGFSQDFLSKGSEQESM-ARLKRLMTIMDSMNDGELDNRDG----AKLFSK 125
P S+I GMIPG Q G + E+ ++KR+M I D+M ELD+ DG A + SK
Sbjct: 376 PLSKIAGMIPGMGQMLSGAGGDDEAAGGKMKRMMFITDAMTAEELDS-DGRLFYAPIRSK 434
Query: 126 Q----------------------------------TGRITRVAQGAGVTEKEVKDLISQY 151
+ T R RVA+G+G + KEV++ + QY
Sbjct: 435 KPPVSADTKEVAIAESSTAAAKSKKKKKPQQKVRMTARARRVARGSGTSVKEVEEFLMQY 494
Query: 152 TKFAAVVKKMGGIKGLF 168
+++VKKMGG +G
Sbjct: 495 RLVSSMVKKMGGKQGWL 511
>gi|241957976|ref|XP_002421707.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
gi|223645052|emb|CAX39646.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
Length = 567
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 88/139 (63%), Gaps = 6/139 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+GLI+ V L L +E + IE IK G+FTL+D Q N +KMGP + I MIP
Sbjct: 314 IGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLKDFQNQMNNFLKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ ++E+ ++K ++ IMDSM EL++ DG ++F K+ RI RVA+G+G
Sbjct: 374 GLS-NIMSQVGDEETSKKIKNMIYIMDSMTTKELES-DG-RIFIKEPSRIVRVARGSGCA 430
Query: 141 EKEVKDLISQYTKFAAVVK 159
EV+ ++ Q+ + + K
Sbjct: 431 VVEVEMILQQHRMMSTMAK 449
>gi|149246331|ref|XP_001527635.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
gi|146447589|gb|EDK41977.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
Length = 563
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 89/139 (64%), Gaps = 6/139 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L+L +E + IE IK G+FTL+D Q N MKMGP + I MIP
Sbjct: 314 IGDIQSLIEHVQSLQLHQDEGHKKTIENIKEGKFTLKDFQTQMNNFMKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ E+E+ +++ ++ IMDSM EL++ DG ++F K+ RI RVA+G+G +
Sbjct: 374 GMS-NIMSQVGEEETSKKIRNMIFIMDSMTTKELES-DG-RIFIKEPSRIVRVAKGSGCS 430
Query: 141 EKEVKDLISQYTKFAAVVK 159
EV+ ++ Q+ + + K
Sbjct: 431 AVEVEMILQQHRMMSTMAK 449
>gi|392574127|gb|EIW67264.1| hypothetical protein TREMEDRAFT_72197 [Tremella mesenterica DSM
1558]
Length = 584
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 13/170 (7%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQN 65
L + P + MGD++GL++ + ++ + E E+ +K++ G+F+LRD EQ +
Sbjct: 288 LERFAPQPFVSKLLGMGDMQGLMEHMQDMARANPERQKEMAKKLEQGKFSLRDWREQLSS 347
Query: 66 IMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS- 124
IM MG S+I MIPG + GSE+E+ ++KRLM I D+M ELD+ DG FS
Sbjct: 348 IMNMGSLSKIASMIPGLPAGVMD-GSEEEATMKMKRLMFITDAMRQDELDS-DGLIFFSF 405
Query: 125 KQTG-------RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGL 167
+ G R RVA+G+G + +EV++L++Q A + ++ GG G
Sbjct: 406 DKAGHPVGLNRRARRVARGSGTSLREVEELLAQARMMAGMARQAGGQNGW 455
>gi|429965858|gb|ELA47855.1| signal recognition particle protein SRP54 [Vavraia culicis
'floridensis']
Length = 468
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 108/179 (60%), Gaps = 12/179 (6%)
Query: 25 GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQ 84
GD+EGL +K+ +LK+D+ +E++ KI+ G++TL+D Q Q +M +GP S++M MIPG
Sbjct: 295 GDLEGLAEKIKDLKIDE-KEIVNKIRSGKYTLKDFNLQLQQLMSLGPLSKVMEMIPGMGN 353
Query: 85 DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEV 144
+S L++++ I DSM + EL + DG ++ ++ R+TR+A+G+G + V
Sbjct: 354 FPMS------DEGVLRKMVCIFDSMTEKELGS-DG-EILKREPTRVTRIARGSGTRPELV 405
Query: 145 KDLISQYTKFAAVVKKMGGIKGLFK--GGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
L++Q+ A ++KK+G +G D +K ++ ++ KL QQ + V++QM
Sbjct: 406 LQLVAQFEMMANLMKKLGNNQGFMNLLNADTSK-MSASEKAKLKQQATGFLPKNVINQM 463
>gi|254573270|ref|XP_002493744.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|238033543|emb|CAY71565.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|328354432|emb|CCA40829.1| Signal recognition particle subunit SRP54 [Komagataella pastoris
CBS 7435]
Length = 518
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 11 HYLNFPLYCG------ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQ 64
H NF + G + +GDIEGL++ V + LD + I+ K G+FTL+D Q
Sbjct: 278 HIQNFEKFSGRGFISKLLGIGDIEGLMEHVQSMNLDQGD-TIKNFKEGKFTLQDFQTQLN 336
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
NIMKMGP S++ M+PG + + E+E+ RLKR++ IMDSM EL + DG +LF
Sbjct: 337 NIMKMGPLSKLAQMLPGGMGQLMGQVGEEEASKRLKRMIYIMDSMTKQELSS-DG-RLFI 394
Query: 125 KQTGRITRVAQGAGVTEKEVKDLISQ 150
Q R+ RVA+G+G + EV+ ++ Q
Sbjct: 395 DQPSRMVRVARGSGTSVTEVELVLLQ 420
>gi|260941516|ref|XP_002614924.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
gi|238851347|gb|EEQ40811.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
Length = 569
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 85/130 (65%), Gaps = 6/130 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GD++ LI+ V L L D+E + +E K G+FTLRD Q N +KMGP + I MIP
Sbjct: 335 IGDVQSLIEHVQSLNLQDDENHKKTLENFKEGKFTLRDFQTQMNNFLKMGPLTNIASMIP 394
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +++ E+E+ ++K ++ IMDSM ELD+ DG +LF+K+ RI RVA+G+G +
Sbjct: 395 GMS-NIMNQVGEEETSKKIKNMIYIMDSMTAQELDS-DG-QLFTKEPTRILRVARGSGCS 451
Query: 141 EKEVKDLISQ 150
EV+ ++ Q
Sbjct: 452 AVEVEMVLQQ 461
>gi|226739|prf||1604366A signal recognition particle 54kD protein
Length = 522
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 87/128 (67%), Gaps = 3/128 (2%)
Query: 41 DNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLK 100
D + +++ ++ G+FT+RD +Q NIMK+GP S++ MIPG S + ++ +++E R+K
Sbjct: 313 DKKNMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMS-NMMNGMNDEEGSLRMK 371
Query: 101 RLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R++ I+DSM + ELD+ DG LF +Q R+ RVA+G+G + EV++ ISQ FA + KK
Sbjct: 372 RMLYIVDSMIEQELDS-DGL-LFVEQPSRVLRVARGSGTSVLEVEETISQVRVFAQMAKK 429
Query: 161 MGGIKGLF 168
+GG G+
Sbjct: 430 IGGKDGIL 437
>gi|354544876|emb|CCE41601.1| hypothetical protein CPAR2_801530 [Candida parapsilosis]
Length = 559
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 8/175 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L +E + IE IK G+FTL+D Q N MKMGP + I MIP
Sbjct: 314 IGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQMNNFMKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S +S+ E+E+ +++ ++ IMDSM EL++ DG ++F K+ RI R+A+G+G +
Sbjct: 374 GMS-GLMSQVGEEETSNKIRNMIFIMDSMTTKELES-DG-RMFIKEPSRIVRIARGSGCS 430
Query: 141 EKEVKDLISQYTKFAAVVKK--MGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMM 193
EV+ ++ Q+ +++ K +G GG N +MM+ Q M
Sbjct: 431 VVEVEMILQQHRMMSSMAKSAIAAQAQGGQPGGPFAGNSQMQRMMQNAQSNPNFM 485
>gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM
3638]
gi|397652622|ref|YP_006493203.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
gi|23822176|sp|Q8U070.1|SRP54_PYRFU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM
3638]
gi|393190213|gb|AFN04911.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
Length = 443
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELK--LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL+ ++ EE IE+ G+FTL+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGPLKQILRM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG D +S G E RLK+ IMDSM + EL N + RI R+A
Sbjct: 353 IPGLGYSLPDDVISIGEE-----RLKKFKVIMDSMTEEELLNPEII-----NYSRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + K+VK+L+ QY + + K M
Sbjct: 403 RGSGTSTKDVKELLDQYRQMKKLFKSM 429
>gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus]
Length = 443
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELK--LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL+ ++ EE IE+ G+FTL+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGPLKQILRM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG D +S G E RLK+ IMDSM + EL N + RI R+A
Sbjct: 353 IPGLGYSLPDDVISIGEE-----RLKKFKVIMDSMTEEELLNPEII-----NYSRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + K+VK+L+ QY + + K M
Sbjct: 403 RGSGTSTKDVKELLDQYRQMKKLFKSM 429
>gi|374635569|ref|ZP_09707165.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
gi|373561871|gb|EHP88096.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
Length = 451
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K +EL + EE I+ I G+FTL ++Y Q + I KMGP QIM MIP
Sbjct: 293 LLGMGDLDTLLEKADELVDEKTEESIDAILRGKFTLNELYAQLEAINKMGPIKQIMSMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G L K + Q + +LK+ IMDSM E +N + K RI R+A+GAGV
Sbjct: 353 GLGGG-LPKEAAQVTEQKLKKYRIIMDSMTKEEKENPEIIK-----ASRIQRIARGAGVK 406
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI 173
++EVK+L+ Y V+ + K L GG I
Sbjct: 407 QEEVKELLKYYATTKKAVENLKRGKMLKMGGPI 439
>gi|150399615|ref|YP_001323382.1| signal recognition particle protein Srp54 [Methanococcus vannielii
SB]
gi|166222337|sp|A6UQJ8.1|SRP54_METVS RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150012318|gb|ABR54770.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus vannielii SB]
Length = 450
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 6/132 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K ++ + EE I+ I G+FTL ++Y Q + I KMGP QIMGMIP
Sbjct: 293 LLGMGDLDSLLEKTEDVMDESTEESIDSILKGKFTLVELYAQLETISKMGPMKQIMGMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF + + K + Q + +LKR +MDSM E +N + K T R+ R+A+GAGV
Sbjct: 353 GFGGN-MPKEAAQLTEQKLKRYKIMMDSMTMEEKENPELIK-----TSRLQRIAKGAGVK 406
Query: 141 EKEVKDLISQYT 152
+ E+KDL+ Y
Sbjct: 407 QDEIKDLLKYYA 418
>gi|333911098|ref|YP_004484831.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
gi|333751687|gb|AEF96766.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
Length = 451
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K +EL + EE I+ I G+FTL ++Y Q + I KMGP QIM MIP
Sbjct: 293 LLGMGDLDSLLEKADELVDEKTEESIDAILRGKFTLNELYAQLEAINKMGPIKQIMNMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF L K Q + +LK+ IMDSM E +N + K RI R+A+GAGV
Sbjct: 353 GFGAG-LPKEVVQITEQKLKKYRIIMDSMTKEEKENPEIIK-----ASRIERIARGAGVK 406
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI 173
+EVK+L+ Y ++ + K L GG I
Sbjct: 407 PEEVKELLRYYATTKRAIENLKRGKMLKMGGPI 439
>gi|336121936|ref|YP_004576711.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
gi|334856457|gb|AEH06933.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
Length = 456
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E L++K +L +D EE I+ I G+FTL ++Y Q + I KMGP QIM MIP
Sbjct: 299 LLGMGDLEALLEKTEDLIDEDTEESIDAILKGKFTLNELYSQLEAISKMGPMKQIMSMIP 358
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF + K + + +LK+ IMDSM E +N + K T R+ R+++GAGV
Sbjct: 359 GFG-GAIPKDAANLTEQKLKKYKIIMDSMTKEEKENPEIIK-----TSRMKRISRGAGVK 412
Query: 141 EKEVKDLISQYT 152
++E+K+L+ Y
Sbjct: 413 QEEIKELLKYYA 424
>gi|223477851|ref|YP_002582335.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
gi|214033077|gb|EEB73905.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
Length = 448
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K+ EL+ + EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG D + G E +L+R IMDSM + EL+N D RI R+A
Sbjct: 353 IPGLGYSLPDDAIRVGEE-----KLRRYRIIMDSMTEEELENPDIINY-----SRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + +EV++L++QY + + K +
Sbjct: 403 RGSGTSTREVRELLAQYNQMRKMFKNL 429
>gi|150401682|ref|YP_001325448.1| signal recognition particle protein Srp54 [Methanococcus aeolicus
Nankai-3]
gi|166222333|sp|A6UWG4.1|SRP54_META3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150014385|gb|ABR56836.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus aeolicus Nankai-3]
Length = 450
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K ++ DD EE ++ + G+FTL ++Y Q + I KMG Q+M MIP
Sbjct: 293 LLGMGDLDSLLEKTEDIIDDDTEESLDAMMRGKFTLNELYSQLEAISKMGSMKQLMAMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G + L KG+ + +LK+ IMDSM E +N D K T R+ R+A+GAGV
Sbjct: 353 GMGTN-LPKGAADITEHKLKKYKIIMDSMTSTEKENPDIIK-----TSRMKRIAKGAGVK 406
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQ 179
++E+K+L+ Y+ + M K L GG + K + Q
Sbjct: 407 QEEIKELLKYYSTTKNAFQNMKSGKMLKMGGPMGKIMRQ 445
>gi|242033617|ref|XP_002464203.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
gi|241918057|gb|EER91201.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
Length = 471
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 94/160 (58%), Gaps = 12/160 (7%)
Query: 31 IDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFL 87
++K++ + DDN +++E++ FTLR + + F+ ++ MGP Q++ MIPG D
Sbjct: 303 MEKIHGVPADDNRSPYQILEELTKENFTLRALRKLFRAMLSMGPLGQLVSMIPGLISD-- 360
Query: 88 SKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDL 147
+ SE+E A++KR MT+MDSM D ELD KL +K RI RVA+G+G +EV D+
Sbjct: 361 -RFSEKEGQAKMKRYMTMMDSMTDAELDG-TSTKLMNKS--RINRVARGSGRPVREVVDM 416
Query: 148 ISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQ 187
+ ++ + A ++ K+ +K + DI VN LNQ
Sbjct: 417 LEEHKRMAKMMSKLPNVK---RPNDINHLVNAIPQPLLNQ 453
>gi|344304252|gb|EGW34501.1| hypothetical protein SPAPADRAFT_134434 [Spathaspora passalidarum
NRRL Y-27907]
Length = 559
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 87/139 (62%), Gaps = 6/139 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L ++E + IE IK G+FTL+D Q N +KMGP + I MIP
Sbjct: 314 IGDIQSLIEHVQSLNLQNDEGHKQTIENIKEGKFTLKDFQTQMNNFLKMGPLTNIASMIP 373
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G + +S+ E+E+ ++K ++ IMDSM EL++ DG ++F Q RI R+A+G+G +
Sbjct: 374 GLG-NIMSQVGEEETSKKIKNMIYIMDSMTQKELES-DG-RIFIDQPSRIIRLAKGSGCS 430
Query: 141 EKEVKDLISQYTKFAAVVK 159
EV+ ++ Q+ + + K
Sbjct: 431 AIEVEMILQQHRMMSTMAK 449
>gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus
kodakarensis KOD1]
gi|73919452|sp|Q5JJC8.1|SRP54_PYRKO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus
kodakarensis KOD1]
Length = 448
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K+ EL+ + EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKIEELQKEQEFREEDMEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG +D + G E +LKR IMDSM + EL+N + RI R+A
Sbjct: 353 IPGLGYSLPEDAVRVGEE-----KLKRYKVIMDSMTEEELENPEIINY-----SRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G T EV++L++QY + + K +
Sbjct: 403 RGSGATTAEVRELLNQYNQMKKMFKSL 429
>gi|366996675|ref|XP_003678100.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
gi|342303971|emb|CCC71755.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
Length = 585
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 92/137 (67%), Gaps = 4/137 (2%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L++++ + +D + ++E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 363 IGDIESLMEQIQTVSNEEDTKAVMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 422
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E E+ +++KR++ ++DSM ELD+ DG ++F +Q R+ RVA+G+G +
Sbjct: 423 S-NMMNQVGEDEASSKMKRMIYVLDSMTKEELDS-DG-RIFIEQPSRMIRVAKGSGTSVF 479
Query: 143 EVKDLISQYTKFAAVVK 159
E++ ++ Q FA++ +
Sbjct: 480 EIEGILMQQRMFASMAQ 496
>gi|240104007|ref|YP_002960316.1| signal recognition particle protein Srp54 [Thermococcus
gammatolerans EJ3]
gi|259511389|sp|C5A233.1|SRP54_THEGJ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|239911561|gb|ACS34452.1| Signal recognition particle, subunit SRP54 (srp54) [Thermococcus
gammatolerans EJ3]
Length = 448
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 85/143 (59%), Gaps = 8/143 (5%)
Query: 21 ICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K+ EL+ + EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQM 352
Query: 79 IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
IPG L + + +L+R IMDSM + EL+N D RI R+A+G+G
Sbjct: 353 IPGLGYS-LPDEAVRVGEEKLRRYRIIMDSMTEEELENPDIINY-----SRIKRIARGSG 406
Query: 139 VTEKEVKDLISQYTKFAAVVKKM 161
+ +EV++L++QY + + K +
Sbjct: 407 TSTREVRELLAQYNQMRKMFKNL 429
>gi|150866311|ref|XP_001385860.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
gi|149387567|gb|ABN67831.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
Length = 561
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 84/131 (64%), Gaps = 6/131 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L ++E + +E IK G+FTL+D Q N +KMGP + I MIP
Sbjct: 313 IGDIQSLIEHVQGLNLQNDENHKQTMENIKEGKFTLKDFQNQMNNFLKMGPLTNIASMIP 372
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +S+ E+E+ ++K ++ IMDSM EL++ DG ++F Q RI RVA+G+G
Sbjct: 373 GLS-NIMSQVGEEETSKKIKNMVYIMDSMTTEELES-DG-RIFVDQPSRILRVAKGSGCA 429
Query: 141 EKEVKDLISQY 151
E++ ++ Q+
Sbjct: 430 AVEIEMVLQQH 440
>gi|14520695|ref|NP_126170.1| signal recognition particle protein Srp54 [Pyrococcus abyssi GE5]
gi|12230641|sp|Q9V1E8.1|SRP54_PYRAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|5457911|emb|CAB49401.1| srp54 signal recognition particle, subunit SRP54 [Pyrococcus abyssi
GE5]
gi|380741228|tpe|CCE69862.1| TPA: signal recognition particle protein Srp54 [Pyrococcus abyssi
GE5]
Length = 443
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELK--LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL+ ++ EE +E+ G+FTL+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFKELEKEVEFTEEDLERFLKGKFTLKDMYAQLEAMRKMGPLKQILRM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG + +S G E RL++ IMDSM + EL N D RI R+A
Sbjct: 353 IPGLGYSLPDEVISVGEE-----RLRKFKVIMDSMTEEELMNPDII-----NYSRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + K+VK+L++QY + K M
Sbjct: 403 RGSGTSVKDVKELLNQYNQMKKFFKSM 429
>gi|71015804|ref|XP_758844.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
gi|46098350|gb|EAK83583.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
Length = 638
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 44/196 (22%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL----DDNEELIEKIKHGQ-FTLRDMYEQFQNIMKMG 70
P + MGDI GL+DK+ E+++ + +E+++KI G F++RD EQ NIM MG
Sbjct: 316 PFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGQGGIFSIRDWREQLSNIMGMG 375
Query: 71 PFSQIMGMIPGFSQDFLSKGSEQESM-ARLKRLMTIMDSMNDGELDNRDG----AKLFSK 125
P S+I GMIPG Q G + E+ +++KR+M I D+M ELD+ DG A + SK
Sbjct: 376 PLSKIAGMIPGMGQMLSGAGGDDEAAGSKMKRMMFITDAMTAEELDS-DGRMFYAPIRSK 434
Query: 126 Q--------------------------------TGRITRVAQGAGVTEKEVKDLISQYTK 153
+ T R RVA+G+G + KEV++ + QY
Sbjct: 435 KPPADTKQVAVAESSTAAAKSKKKKKPQSKVRMTARARRVARGSGTSVKEVEEFLMQYRM 494
Query: 154 FAAVVKKMGGIKGLFK 169
A + K++G GLFK
Sbjct: 495 VANMCKRVGKA-GLFK 509
>gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
Length = 453
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 8/143 (5%)
Query: 21 ICCMGDIEGLIDKVNEL--KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL +++ EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 298 LLGLGDIQGLLEKFEELSKEVEFKEEDMEKFLKGKFNLKDMYAQLEAMKKMGPLQQILKM 357
Query: 79 IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
IPG L + S RLK+ IMDSM + EL+N + RI R+A+G+G
Sbjct: 358 IPGMGYS-LPDEMVRMSEVRLKKFKVIMDSMTEEELENPEII-----NYSRIKRIARGSG 411
Query: 139 VTEKEVKDLISQYTKFAAVVKKM 161
T K+VK+LI+QY + + M
Sbjct: 412 TTTKDVKELINQYNQMKKFFRSM 434
>gi|297849956|ref|XP_002892859.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338701|gb|EFH69118.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 444
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQ 74
P + GD GL+DK+ E+ D EL+E + G FTLR MY+QFQ +++ P +Q
Sbjct: 252 PFVSRLLGKGDWSGLVDKLQEVVPKDLQHELVENLSQGNFTLRTMYDQFQCSLQI-PLNQ 310
Query: 75 I---MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRIT 131
+ ++ + + KG ES R KR MT+MDSM + ELD+ + K+F++ RI
Sbjct: 311 VRISCSIVACTIAELMPKGHGDES--RAKRYMTMMDSMTNKELDSSN-TKVFNE--SRIM 365
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMK 184
R+A+G+G +EV +L+ +Y + A K M GIK + K GD++ V QM+K
Sbjct: 366 RIARGSGRLVREVMELLEEYKRIA---KTMKGIK-IPKNGDMSNKVIPPQMLK 414
>gi|375083524|ref|ZP_09730543.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|375083969|ref|ZP_09730981.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741396|gb|EHR77822.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741717|gb|EHR78136.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
Length = 448
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 14/146 (9%)
Query: 21 ICCMGDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL + EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFEELSKETEFTEEDVEKFLRGKFNLKDMYAQLEAMRKMGPLQQILKM 352
Query: 79 IPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
IPG D + K SE+ RLK+ IMDSM + EL+N + RI R+A+
Sbjct: 353 IPGMGYSIPDEVIKVSEE----RLKKFKVIMDSMTEEELENPEII-----NYSRIKRIAR 403
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKM 161
G+G + K+VK+L++QY + K M
Sbjct: 404 GSGTSTKDVKELLNQYKQMKKFFKGM 429
>gi|409095092|ref|ZP_11215116.1| signal recognition particle protein Srp54 [Thermococcus zilligii
AN1]
Length = 449
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 28/165 (16%)
Query: 21 ICCMGDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDIE L++K EL + EE +EK G+F L+DMY Q + + KMGP +++ M
Sbjct: 293 LLGLGDIESLLEKFEELTQEQEIREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLQKVLQM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG + + G E +LKR IMDSM + EL+N D RI R+A
Sbjct: 353 IPGLGYSLPDEAIRVGEE-----KLKRYRVIMDSMTEEELENPDIINY-----SRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYT------------KFAAVVKKMGGIKGL 167
+G+G + KEVK+L++QY K A + K GG+ GL
Sbjct: 403 RGSGTSTKEVKELLAQYNQMRKMFKNLDKRKLAKMAKNFGGLGGL 447
>gi|190347110|gb|EDK39324.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 85/138 (61%), Gaps = 6/138 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L D+E + +E K G+FTLRD Q N KMG + I MIP
Sbjct: 329 IGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQTQMNNFTKMGSLANIASMIP 388
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S +S+ E+E+ +++K ++ IMDSM ELD+ DG ++F++Q RI RVA+GAG
Sbjct: 389 GMS-GIMSQIGEEETSSKIKNMIFIMDSMTTKELDS-DG-RIFTEQPERIIRVARGAGCY 445
Query: 141 EKEVKDLISQYTKFAAVV 158
EV+ ++ Q +A+
Sbjct: 446 AIEVEMVLQQQRMMSAMA 463
>gi|297619646|ref|YP_003707751.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanococcus voltae A3]
gi|297378623|gb|ADI36778.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus voltae A3]
Length = 450
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 22/173 (12%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K +++ + NEE IE I G+FTL ++Y Q + I KMGP QI+ MIP
Sbjct: 293 LLGMGDLDSLLEKTDDIVEEANEEDIEAILKGKFTLVELYSQLETISKMGPMKQILSMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G + K + + +LKR +MDSM + E +N + K T R+ R+A+GAG
Sbjct: 353 GMGAS-MPKEAASLTEQKLKRYKILMDSMTEEEKENPELIK-----TSRMQRIARGAGAK 406
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMM 193
++EVK+L+ Y K F N+ + +M+K+ QM K+M
Sbjct: 407 QEEVKELLKYYQ----------TTKNAF------SNLKRGKMLKMGGQMGKIM 443
>gi|300706383|ref|XP_002995462.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
gi|239604578|gb|EEQ81791.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
Length = 466
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD+ GL K+++LK+D+ +EL K + G FTL D QF+ ++ +GP ++++ M+PG S
Sbjct: 293 MGDLHGLSRKISDLKIDE-KELFNKFQKGTFTLNDFSVQFKQLLSLGPMTKLLEMLPGTS 351
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + K+L+ I+DS++ EL N DG + K+ RI R+A+G+ T +E
Sbjct: 352 N------FQMPDEKKFKKLICILDSLSKSEL-NSDGL-IIEKENSRILRIAKGSASTPQE 403
Query: 144 VKDLISQYTKFAAVVKKMGGIKGL--FKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
V DL+ Q+ + ++K+ I G G D +++++Q K QQ M+ +L M
Sbjct: 404 VYDLLVQFRNMSNMMKRFANIPGYSDLIGKD-PGSLSESQKAKFKQQAKGMLPKDLLDSM 462
>gi|344232045|gb|EGV63924.1| signal recognition particle protein [Candida tenuis ATCC 10573]
Length = 554
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 12/149 (8%)
Query: 11 HYLNFPLY------CGICCMGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYE 61
H +F L+ + +GD++ L+D V L L D+E + +E IK G+FT+RD
Sbjct: 294 HVADFELFKPSSFISKLLGIGDLQSLMDHVKSLNLQDDENHKKTMEHIKEGKFTVRDFQT 353
Query: 62 QFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAK 121
Q N MKMGP + I MIPG + + E+E+ A++K ++ IMDSM ELD+ DG
Sbjct: 354 QMNNFMKMGPLTNIASMIPGMG-NLMGAVGEEEASAKMKDMIYIMDSMTQQELDS-DGL- 410
Query: 122 LFSKQTGRITRVAQGAGVTEKEVKDLISQ 150
LF + RI RVA+GAG +V+ ++ Q
Sbjct: 411 LFIDEPERIVRVARGAGCAVIDVEMVLQQ 439
>gi|12230630|sp|O59307.3|SRP54_PYRHO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 443
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELK--LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL+ ++ EE I++ G+FTL+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYAQLEAMRKMGPLKQILRM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG + +S G E RL++ IMDSM + EL N + RI R+A
Sbjct: 353 IPGLGYSLPDELISVGEE-----RLRKFKVIMDSMTEEELMNPEII-----NYSRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + K+VK+L++QY + K M
Sbjct: 403 RGSGTSIKDVKELLTQYNQMKKFFKSM 429
>gi|14591457|ref|NP_143537.1| signal recognition particle protein Srp54 [Pyrococcus horikoshii
OT3]
gi|3258124|dbj|BAA30807.1| 445aa long hypothetical signal recognition particle protein
[Pyrococcus horikoshii OT3]
Length = 445
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELK--LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL+ ++ EE I++ G+FTL+DMY Q + + KMGP QI+ M
Sbjct: 295 LLGLGDIQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYAQLEAMRKMGPLKQILRM 354
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG + +S G E RL++ IMDSM + EL N + RI R+A
Sbjct: 355 IPGLGYSLPDELISVGEE-----RLRKFKVIMDSMTEEELMNPEII-----NYSRIKRIA 404
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + K+VK+L++QY + K M
Sbjct: 405 RGSGTSIKDVKELLTQYNQMKKFFKSM 431
>gi|374724612|gb|EHR76692.1| signal recognition particle subunit SRP54 [uncultured marine group
II euryarchaeote]
Length = 456
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 29/178 (16%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNE--ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ MGDI+GLID E +D+ E L +++ G+FTL DMY+Q + + K+G ++M
Sbjct: 289 LLGMGDIQGLIDLAPE-DMDEEEAMRLTQRLMSGRFTLNDMYKQMEMMSKVGTIDKLMSF 347
Query: 79 IPGF---SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+PG +SKG ++ L R TIMDSM E + AK+ + RI RVA+
Sbjct: 348 LPGNMLGGMGAMSKGQKEAMQGNLDRYRTIMDSMTAWE--KNEPAKI---KADRIRRVAR 402
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMM 193
GAGV EK+V++LI+Q+ + ++K MGG + KLN+QM KMM
Sbjct: 403 GAGVREKDVRELIAQWNRSRKMMKGMGGNR------------------KLNKQMRKMM 442
>gi|432328008|ref|YP_007246152.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
gi|432134717|gb|AGB03986.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
Length = 449
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNI 66
L H+ + MGD+E L++ EL++D+ E+++EK+ G+F L+DMYE ++ +
Sbjct: 275 LEHFNPTRFISRLLGMGDLETLLETAKELEMDEERAEKVMEKMMSGKFNLKDMYEIWEQM 334
Query: 67 MKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ 126
K G +I+ IP F + K +ES +LKR IMDSM EL+N + K
Sbjct: 335 AKPGLLQKILYSIPFFKMGDIDKNMVEESEEKLKRYRIIMDSMTYEELENPEIIK----- 389
Query: 127 TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
RI R+A+G+G +E+EV+ L+ +Y + +K+M G + L +
Sbjct: 390 ASRIRRIARGSGKSEQEVRALLKEYHRMRKAMKQMRGNRKLMRA 433
>gi|358060767|dbj|GAA93538.1| hypothetical protein E5Q_00182 [Mixia osmundae IAM 14324]
Length = 523
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 18/170 (10%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDD---NEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + MGD++GL++ V E+ ++ E+++K++ G FT+RD+ +Q NIM MGP
Sbjct: 291 PFISKMLGMGDMQGLMETVQEVHQNNPNQRAEMLKKLEAGVFTVRDLKDQMSNIMSMGPL 350
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG---- 128
S+I MIPG D L + + + +KR+M I D+M EL++ DG + T
Sbjct: 351 SKIAQMIPGMG-DMLGGENSEAASHTIKRMMYIFDAMTAEELES-DGKLFHTSPTNTEYR 408
Query: 129 ---------RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFK 169
R+ R+A+G+G + +E + L++Q+ FA + KK GG G +
Sbjct: 409 EGQLREPNKRVLRIARGSGTSVQECEGLLAQHRMFAEMAKKAGGKGGWMQ 458
>gi|389852998|ref|YP_006355232.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
gi|388250304|gb|AFK23157.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
Length = 443
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 87/147 (59%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELK--LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K E++ ++ +EE +E+ G+FTL+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFKEVEKEIELSEEDVERFLKGKFTLKDMYAQLEAMRKMGPLKQILRM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG + +S G E RL++ IMDSM + EL N D RI R+A
Sbjct: 353 IPGLGYSLPDELISVGEE-----RLRKFKVIMDSMTEEELMNPDII-----NYSRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + ++V++L++QY + K M
Sbjct: 403 RGSGTSIRDVRELLNQYKQMKKFFKSM 429
>gi|255716822|ref|XP_002554692.1| KLTH0F11374p [Lachancea thermotolerans]
gi|238936075|emb|CAR24255.1| KLTH0F11374p [Lachancea thermotolerans CBS 6340]
Length = 534
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L++ L +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 300 IGDIESLLEHFQTLSNKEDTKATMENIQQGKFTLLDFQKQMQTIMKMGPLSNIASMIPGM 359
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ L++ SE+E+ R+K+++ +MDSM EL++ DG ++F Q RI RVA+G+G +
Sbjct: 360 G-NMLNQVSEEETTKRMKKMVFVMDSMTKQELES-DG-RIFIDQPSRIVRVARGSGTSAF 416
Query: 143 EVKDLISQ 150
+V+ ++ Q
Sbjct: 417 DVEMILMQ 424
>gi|315230023|ref|YP_004070459.1| signal recognition particle [Thermococcus barophilus MP]
gi|315183051|gb|ADT83236.1| signal recognition particle [Thermococcus barophilus MP]
Length = 448
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 14/146 (9%)
Query: 21 ICCMGDIEGLIDKVNELKLDDN--EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFEELSKAQELKEEDLEKFMRGKFNLKDMYAQLEAMSKMGPLKQILQM 352
Query: 79 IPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
IPG D + + SEQ RL++ IMDSM + EL++ + RI R+A+
Sbjct: 353 IPGLGYSLPDDVVRVSEQ----RLRKFKVIMDSMTEEELEHPEII-----NYSRIKRIAR 403
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKM 161
G+G T K+VK+L+ QY + K M
Sbjct: 404 GSGTTVKDVKELLEQYNQMKKFFKSM 429
>gi|50306973|ref|XP_453464.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642598|emb|CAH00560.1| KLLA0D09020p [Kluyveromyces lactis]
Length = 530
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 92/152 (60%), Gaps = 9/152 (5%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L+++ + DD + +E I+ G+FTL D Q Q IMKMGP S I MIPG
Sbjct: 303 IGDIESLMERFQTVSDQDDAKNTLENIQQGKFTLLDFKNQMQTIMKMGPLSNIANMIPGM 362
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ L++ SE+E+ ++K ++ I DSM EL++ DG ++F + R+ RVA+G+G T
Sbjct: 363 G-NMLNQFSEEETSKKMKTMVYIFDSMTKKELES-DG-RIFIDEPSRLVRVAKGSGTTVF 419
Query: 143 EVKDLISQ---YTKFAAVVKKMGGIKGLFKGG 171
+++ L+ Q + A K+MGG+ KGG
Sbjct: 420 DIEMLLMQQQMMARMAQTTKQMGGLPT--KGG 449
>gi|150402723|ref|YP_001330017.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C7]
gi|166222336|sp|A6VHE0.1|SRP54_METM7 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150033753|gb|ABR65866.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C7]
Length = 450
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
I MGD++ L++K ++ + EE I+ I G+FTL ++Y Q + I KMGP QI+ MIP
Sbjct: 293 ILGMGDLDSLLEKTEDIMDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G + L K + Q + +LKR +MDSM E +N + K R+ R+A+GAGV
Sbjct: 353 GMGGN-LPKEAAQLTEDKLKRYKIMMDSMTMEEKENPELIK-----ASRLQRIAKGAGVK 406
Query: 141 EKEVKDLISQYT 152
++E+KDL+ Y+
Sbjct: 407 QEEIKDLLKYYS 418
>gi|302306335|ref|NP_982582.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|299788468|gb|AAS50406.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|374105781|gb|AEY94692.1| FAAR041Wp [Ashbya gossypii FDAG1]
Length = 514
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 101/169 (59%), Gaps = 9/169 (5%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L+++ + +D + +E I+ G+FTL D +Q Q IMKMGP S + MIPG
Sbjct: 301 IGDIESLLEQFQTVSNKEDTKATMENIQQGRFTLLDFQKQMQTIMKMGPLSNLASMIPGM 360
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S +S SE E+ ++K+++ ++DSM+ EL++ DG ++F + R+ RVA+G+G +
Sbjct: 361 S-GMMSGISEDETSRKMKKMVYVLDSMSREELES-DG-RVFIDEPARMLRVARGSGTSVF 417
Query: 143 EVKDLISQ---YTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQ 188
EV+ ++ Q + A K MGG+ G+ G + + QMM+ QQ
Sbjct: 418 EVEMILMQQQMMARMAQGAKNMGGLPGMPAGPGMPR--LSPQMMQHAQQ 464
>gi|299117528|emb|CBN75372.1| SRP54, GTPase subunit of the signal recognition particle (Partial)
[Ectocarpus siliculosus]
Length = 507
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 102/181 (56%), Gaps = 11/181 (6%)
Query: 25 GDIEGLIDKVNELK--LDDNEELIEKIKH-GQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
GD++GL+ ++ E + D +E++E+I + G+FTLRD+Y+Q + MK+GP +++MGMIPG
Sbjct: 308 GDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLYKQLSSAMKLGPMNKVMGMIPG 367
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
+ + + K+ + IMDSM D EL DG S+ R+ R+A+G+G
Sbjct: 368 MGE-MAQMANNSTTQGMFKKNLYIMDSMTDDEL---DGKVDLSQCESRLLRIARGSGTHP 423
Query: 142 KEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQM 201
+V+ L+ + F V K+G K + GD +K + L +Q MDP+V+ +
Sbjct: 424 DQVRGLLKLHKHFEKVFGKVG--KNM--KGDASKAKQLQRNPALAKQHLNQMDPKVVESL 479
Query: 202 G 202
G
Sbjct: 480 G 480
>gi|378756834|gb|EHY66858.1| signal recognition particle 54 kDa subunit [Nematocida sp. 1 ERTm2]
Length = 477
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 16/179 (8%)
Query: 24 MGDIEGLIDKVNELKL--DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
+GDI +K+ L + + EELI KIK G+F++ D Y+Q++ I+++GP Q++ +IPG
Sbjct: 295 LGDISSFAEKIEGLNISQEKQEELIGKIKAGEFSIGDFYDQYKRILELGPIGQLLSLIPG 354
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
+ +E+E K++ TI +M EL + ++F + R+ RVA+G+GVT
Sbjct: 355 LNSSMF---NEKE----FKKMGTIFTAMTKKEL--KTNGEVFIRSLSRLVRVAKGSGVTP 405
Query: 142 KEVKDLISQYTKFAAVVKKMGG---IKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDP 195
+V+D I+ Y A + +K+ GL G G KN+ Q+ KMM P
Sbjct: 406 TQVRDAINTYRMMAQMFQKISSNPMFAGLLGGQNGANDKNITPDAARSQINQLKKMMPP 464
>gi|242038763|ref|XP_002466776.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
gi|241920630|gb|EER93774.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
Length = 476
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 31 IDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFL 87
+DK++ + DN +++E++ FTLR + + F+ ++ MGP Q++ MIPG D
Sbjct: 308 MDKMHGIPAYDNRSPYQILEELTKENFTLRALRKLFRAMLSMGPLGQLVSMIPGLISD-- 365
Query: 88 SKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDL 147
+ SE+E A++KR MT+MDSM D ELD KL ++ RI RVA+G+G ++V D+
Sbjct: 366 -RFSEKEGHAKMKRYMTMMDSMTDAELDG-TSTKLMNQS--RIKRVARGSGRPVRDVVDM 421
Query: 148 ISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
+ ++ + A ++ K+ +K + DI VN LNQ K ++ QMG
Sbjct: 422 LEEHKRMAKMMSKLPNVK---RPNDINTLVNAIPQPLLNQFGGKFGLQSLIRQMG 473
>gi|193084084|gb|ACF09754.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote AD1000-40-D7]
Length = 444
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 87/144 (60%), Gaps = 7/144 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD++ L+++ E L + E+ K+ G+FTL DM EQ + + KMGP S++M M+
Sbjct: 288 LLGMGDLQTLLERAEEVLDAESAEDTARKMLSGKFTLIDMREQMEALTKMGPLSKVMEMV 347
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG S + KG E+ +L++ +M+SM + EL+N K+ + RI R+A+G+G
Sbjct: 348 PGMS-GMMKKGQMDETQDKLEKFKVLMNSMTEEELEN---PKIIKRS--RINRIAKGSGS 401
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
+E++DL+ QY + ++ +GG
Sbjct: 402 DPQEIRDLLKQYNQSRKMMSNIGG 425
>gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus
NA1]
gi|229558607|sp|B6YSS1.1|SRP54_THEON RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus
NA1]
Length = 448
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K EL+ EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFEELQKQQEFREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG D + G E RLK+ IMDSM + EL++ + RI R+A
Sbjct: 353 IPGMGYSLPDDAVRVGEE-----RLKKFKVIMDSMTEEELEHPEIINY-----SRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + +EV++L+ QY + + K M
Sbjct: 403 RGSGTSIQEVRELLHQYNQMKKMFKSM 429
>gi|343429513|emb|CBQ73086.1| probable SRP54-signal recognition particle subunit [Sporisorium
reilianum SRZ2]
Length = 637
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 46/191 (24%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEE----LIEKIKHG-QFTLRDMYEQFQNIMKMG 70
P + MGD+ GL+DK+ E++++ +E +++KI+ G F++RD EQ NIM MG
Sbjct: 316 PFISKLLGMGDMSGLMDKMEEMQMNGGQERQREMLKKIEEGGHFSIRDWREQLSNIMGMG 375
Query: 71 PFSQIMGMIPGFSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLFS----- 124
P S+I GMIPG Q G + E+ ++KR+M I D+M ELD+ DG ++F+
Sbjct: 376 PLSKIAGMIPGMGQMLSGAGGDDEAAGNKMKRMMFITDAMTAEELDS-DG-RIFTTPVRS 433
Query: 125 ---------------------------------KQTGRITRVAQGAGVTEKEVKDLISQY 151
+ R RVA+G+G + KEV++ + QY
Sbjct: 434 KKPPAADTKELAVAESSTAAAKSKKKKKPQPKVRMNARARRVARGSGTSVKEVEEFLMQY 493
Query: 152 TKFAAVVKKMG 162
+V +MG
Sbjct: 494 RLVGGMVNRMG 504
>gi|159905503|ref|YP_001549165.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C6]
gi|238686963|sp|A9A9B0.1|SRP54_METM6 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|159886996|gb|ABX01933.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C6]
Length = 450
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
I GD++ L++K ++ + EE I+ I G+FTL ++Y Q + I KMGP QI+ MIP
Sbjct: 293 ILGFGDLDSLLEKTEDIMDESAEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G + + K + Q + +LKR +MDSM E +N + K T R+ R+A+GAGV
Sbjct: 353 GMGGN-MPKEAAQLTEDKLKRYKIMMDSMTMEEKENPELIK-----TSRLQRIARGAGVK 406
Query: 141 EKEVKDLISQYT 152
+E+KDL+ Y+
Sbjct: 407 PEEIKDLLKYYS 418
>gi|449513469|ref|XP_004164333.1| PREDICTED: signal recognition particle 54 kDa protein 3-like
[Cucumis sativus]
Length = 144
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 82/127 (64%), Gaps = 12/127 (9%)
Query: 78 MIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
M+PG+S D + KG E+ES A+LKR MT+MDSM D ELD+ + KL ++ R+ R+A+G+
Sbjct: 1 MLPGYSADLMPKGREKESQAKLKRYMTMMDSMTDEELDSTN-PKLINES--RMMRIARGS 57
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDP 195
G +EV +++ +Y + A V KM G+K KG +++N+N Q M+K++ P
Sbjct: 58 GHRVQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKVLPP 110
Query: 196 RVLHQMG 202
++L Q+G
Sbjct: 111 QILKQIG 117
>gi|146416143|ref|XP_001484041.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+GDI+ LI+ V L L D+E + +E K G+FTLRD Q N KMG + I MIP
Sbjct: 329 IGDIQSLIEHVQLLNLQDDESHKKTMENFKEGKFTLRDFQTQMNNFTKMGSLANIALMIP 388
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S +S+ E+E+ +++K ++ IMD M ELD+ DG ++F++Q RI RVA+GAG
Sbjct: 389 GMS-GIMSQIGEEETSSKIKNMIFIMDLMTTKELDS-DG-RIFTEQPERIIRVARGAGCY 445
Query: 141 EKEVKDLISQYTKFAAVV 158
EV+ ++ Q +A+
Sbjct: 446 AIEVEMVLQQQRMMSAMA 463
>gi|333988486|ref|YP_004521093.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
gi|333826630|gb|AEG19292.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
Length = 443
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 86/149 (57%), Gaps = 12/149 (8%)
Query: 21 ICCMGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDI LI+K E+ DD + + ++ + G+FTL+DMY QF+ + KMGP Q+M MI
Sbjct: 290 LLGMGDIRSLIEKAEEIAKDDIDMDSVDAMMSGKFTLKDMYSQFEMMNKMGPMKQVMNMI 349
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG L K + Q + +L + +MDSM + EL++ + K R+ R+A+G+G+
Sbjct: 350 PGMGSK-LPKNASQMTEEKLGKYKILMDSMTEYELEHPEVIK-----QSRVKRIARGSGM 403
Query: 140 TEKEVKDLISQYTKFAAVVK-----KMGG 163
++VK+L+ Y +K KMGG
Sbjct: 404 RNEDVKELMKYYNVTKKAIKGFGKRKMGG 432
>gi|124028501|ref|YP_001013821.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
gi|171769654|sp|A2BNB5.1|SRP54_HYPBU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|123979195|gb|ABM81476.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
Length = 447
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 18/147 (12%)
Query: 21 ICCMGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD+E L++K+ L+ +++ E+ + ++ G+ T R +Y+Q Q + K+GPF +I+ MI
Sbjct: 293 LLGMGDLESLLEKIERLRGVEEFEKTVAEMMSGKITFRTIYKQLQQVTKLGPFRKILQMI 352
Query: 80 PGFSQ-----DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
PG S D ++ SE+ ++K+ +TIM+SM ELDN + ++ R+ R+A
Sbjct: 353 PGISTMLESLDEAARLSEE----KVKKWLTIMNSMTYEELDNPN----LLEERSRVKRIA 404
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
GAGV EV++L + Y VKKM
Sbjct: 405 VGAGVEPSEVRELYNYYKS----VKKM 427
>gi|118355606|ref|XP_001011062.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila]
gi|89292829|gb|EAR90817.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila SB210]
Length = 460
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 89/139 (64%), Gaps = 6/139 (4%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GD +G+I+ V+E + L+ ++ I++I GQFTLR + + +++I+KMG +Q M MIPG
Sbjct: 295 LGDFKGMIETVSEVIDLESQQQNIKQIAKGQFTLRALQQNYKSILKMGSLNQFMSMIPGM 354
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ SE+E + ++K+ +TIMDSM++ ELD ++ KQ + R+++G+G +
Sbjct: 355 QNIIQGQISEKEQINKIKKSLTIMDSMSNDELDGI--TQITQKQ---LFRISKGSGQPIE 409
Query: 143 EVKDLISQYTKFAAVVKKM 161
VK LI + FA +KK+
Sbjct: 410 NVKLLIDEQKTFAKTLKKI 428
>gi|387594285|gb|EIJ89309.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm3]
gi|387595031|gb|EIJ92658.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm1]
Length = 477
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 16/179 (8%)
Query: 24 MGDIEGLIDKVNELKL--DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
+GDI +K+ L + + EELI KIK G+F++ D Y+Q++ I+++GP Q++ +IPG
Sbjct: 295 LGDISSFAEKIEGLNISPEKQEELIGKIKAGEFSIGDFYDQYKKILELGPIGQLLSLIPG 354
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
+ +E+E K++ I +M EL + ++F + R+ RVA+G G T
Sbjct: 355 MNSSMF---NEKE----FKKMGVIFTAMTKKEL--KTNGEVFIRSLPRLIRVAKGCGATP 405
Query: 142 KEVKDLISQYTKFAAVVKKMGG---IKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDP 195
+V+D I+ Y A + +K+ GL G G + KN+ Q+ KMM P
Sbjct: 406 TQVRDAINTYRMMAQMFQKISSNPMFAGLLGGQNGAMDKNITPDAARSQINQLKKMMPP 464
>gi|193084148|gb|ACF09814.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote SAT1000-53-B3]
Length = 444
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD++ L+++ E L + E+ K+ G+FTL DM EQ + + KMGP S++M M+
Sbjct: 288 LLGMGDLQTLLERAEEVLDAESAEDTARKMLSGKFTLIDMREQMEALTKMGPLSKVMEMV 347
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG S + KG E+ RL++ +M SM EL+N K+ + RI R+A+G+G
Sbjct: 348 PGMS-GMMKKGQMDETQDRLEKFKVLMSSMTKEELEN---PKIIKRS--RINRIAKGSGS 401
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
+E+++L+ Y + ++ +GG
Sbjct: 402 DSQEIRELLKHYNQSRKMMSNLGG 425
>gi|281206952|gb|EFA81136.1| signal recognition particle 54 kDa subunit [Polysphondylium
pallidum PN500]
Length = 504
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 19/185 (10%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++G+++ + ++ D + L E+I G+FT R+M +QF I+ +GP + + M+P
Sbjct: 294 LLGMGDVKGMMNMIADVVPKDTKAL-EEIASGKFTFRNMKQQFLQILNLGPIDKFVQMMP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S +G +LK + I+DSM+DGEL DG + Q RI R+A+G+G
Sbjct: 353 GMSNIPQLQGDAGN--LKLKAYINILDSMSDGEL---DGKHQITPQ--RILRIARGSGRH 405
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGL---FKGGDITKNVNQTQMMKLNQQMAKMMDPRV 197
+EV +L+ Q F + K G++ L KGG NQ + QQ+A M+ P +
Sbjct: 406 PREVAELVEQKKAFEKMFSKGPGLQNLANMAKGG----VPNQRNL----QQLASMVPPEM 457
Query: 198 LHQMG 202
+ +MG
Sbjct: 458 MKKMG 462
>gi|444321446|ref|XP_004181379.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
gi|387514423|emb|CCH61860.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
Length = 536
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 87/137 (63%), Gaps = 4/137 (2%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L+++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 303 IGDIESLLEQFQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 362
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +S+ SE+E+ ++K+++ ++DSM EL++ DG ++F + R+ RVA+G+G +
Sbjct: 363 G-NLMSQVSEEETSQKMKKMVYVLDSMTKQELES-DG-RIFIDEPSRMVRVAKGSGTSVF 419
Query: 143 EVKDLISQYTKFAAVVK 159
EV+ ++ Q A + K
Sbjct: 420 EVEMILMQQQMMARMAK 436
>gi|440794394|gb|ELR15555.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 8/136 (5%)
Query: 24 MGDIEGLIDKV-NELKLDDNEE-------LIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
MG+I L++ + N + D + E + ++ G FTLRD+YEQ I+KMGP +++
Sbjct: 301 MGNIPALMETMKNAVGADTSAEGKRDSALMANRLLQGGFTLRDLYEQMTTILKMGPLNKV 360
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPG + F E + ++K+ M IMDSM D ELD+ + K R+ R+A+
Sbjct: 361 IEMIPGMDKLFQPNEEEGDPARKVKKFMIIMDSMTDDELDDPEVWKKEKDVQSRVHRIAR 420
Query: 136 GAGVTEKEVKDLISQY 151
GAG +V L++ Y
Sbjct: 421 GAGCAVTDVNALLANY 436
>gi|336364891|gb|EGN93244.1| hypothetical protein SERLA73DRAFT_172158 [Serpula lacrymans var.
lacrymans S7.3]
Length = 566
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 33/205 (16%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPF 72
P + +GD++GL++ + +L D +E+ +K + G+ GP
Sbjct: 295 PFISKLLGLGDMQGLMEHMQDLATQNPDKQKEMAKKTRRGE------------TKHPGPI 342
Query: 73 SQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLF--SKQ---- 126
S+I MIPG Q+ LS GS++E R+KR++ I DSM ELD+ DGA SK
Sbjct: 343 SKIASMIPGLPQELLS-GSDEEGSLRMKRMIYITDSMTSTELDS-DGAVFMDMSKDGKPV 400
Query: 127 --TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMK 184
T R+TRVA+G+G + +EV++L+ QY A + K+ GG G + +++ +
Sbjct: 401 GLTWRVTRVAKGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAMQKMQSIAGGRGRG 460
Query: 185 LN--------QQMAKMMDPRVLHQM 201
N Q M + M P L QM
Sbjct: 461 ANGMPTPAQIQAMQRAMPPGALQQM 485
>gi|50292271|ref|XP_448568.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527880|emb|CAG61531.1| unnamed protein product [Candida glabrata]
Length = 532
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 95/151 (62%), Gaps = 10/151 (6%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIEGL +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 303 IGDIEGLFEQLKTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 362
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +S+ E+E+ ++K+++ ++DSM EL++ DG ++F Q R+ RVA+G+G +
Sbjct: 363 G-NMMSQVGEEETSQKMKKMVYVLDSMTKEELES-DG-RIFIDQPSRLVRVARGSGTSVF 419
Query: 143 EV------KDLISQYTKFAAVVKKMGGIKGL 167
+V + ++++ + A + K+ GG+ G+
Sbjct: 420 DVEMILMQQQMMARMAQNAKMGKQGGGMPGM 450
>gi|402225128|gb|EJU05189.1| signal recognition particle protein [Dacryopinax sp. DJM-731 SS1]
Length = 558
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDNE---ELIEKIKHGQFTLRDMYEQFQN 65
L + P + MGDI+GL++++ E+ D E E+++ ++ G+F+++D EQ N
Sbjct: 287 LERFAPEPFISKMLGMGDIQGLVEQMQEMAQRDPEKQKEVMKNLEQGKFSIKDWREQMGN 346
Query: 66 IMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDN--------- 116
+M MG S+ MIPG GSE+E ++ KR++ + DSM EL++
Sbjct: 347 VMSMGSISKFASMIPGLPD---MAGSEEEISSKFKRMIYMTDSMTAYELESDGLCFVDME 403
Query: 117 RDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
+DG K R RVA+G+G + EV++++ QY A + K GG G +
Sbjct: 404 KDG-KTPIGVNWRAQRVARGSGTSVAEVEEMLFQYRMMANMAKGAGGKNGWIQA 456
>gi|366998227|ref|XP_003683850.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
gi|357522145|emb|CCE61416.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
Length = 537
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIEGL+++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 306 IGDIEGLLEQFQTVSNSEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNITQMIPGM 365
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL + DG +LF + R+ RVA+G+G +
Sbjct: 366 S-NIMNQVGEEETSKKMKKMIYVLDSMTKEELGS-DG-RLFIDEPSRMVRVARGSGTSVF 422
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 423 EVEMILIQ 430
>gi|154151417|ref|YP_001405035.1| signal recognition particle protein Srp54 [Methanoregula boonei
6A8]
gi|153999969|gb|ABS56392.1| GTP-binding signal recognition particle SRP54, G- domain
[Methanoregula boonei 6A8]
Length = 441
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP-GF 82
MGD++ L++KV E ++ D ++ E + G FTLRDMY+Q + + KMGP QIM M+P G
Sbjct: 290 MGDLQALVEKVQEAQMADEVDM-EAMMKGHFTLRDMYKQLEALNKMGPLKQIMSMLPMGN 348
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
Q L +G + ++ R +MDSM+ ELD+ L + + R+ R+A+GAG T +
Sbjct: 349 MQ--LPEGVYDVTSTKMARYRILMDSMSPKELDD---PSLIN--SSRMQRIARGAGGTPE 401
Query: 143 EVKDLISQYTKFAAVVKKMGGIKG 166
EV++L+ Y +K + G G
Sbjct: 402 EVRELLKYYKMMHKTLKGLRGSGG 425
>gi|254580797|ref|XP_002496384.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
gi|238939275|emb|CAR27451.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
Length = 536
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L+++ + +D + +E ++ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 303 IGDIESLLEQFQTVSNTEDTKATMENLQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 362
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +S+ E+E+ ++K+++ ++DSM EL++ DG ++F Q R+ RVA+G+G +
Sbjct: 363 G-NMMSQVGEEETSQKMKKMVYVLDSMTRQELES-DG-RIFVDQPSRLVRVAKGSGTSVF 419
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 420 EVEMILMQ 427
>gi|365982761|ref|XP_003668214.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
gi|343766980|emb|CCD22971.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
Length = 539
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q +MKMGP S I MIPG
Sbjct: 304 IGDIESLFEQLQTVSNKEDTQATMENIQKGKFTLLDFKKQMQTMMKMGPISNIAQMIPGM 363
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +S+ E+E+ ++K+++ + DSM EL++ DG ++F +Q R+ RVA+G+G +
Sbjct: 364 S-NMMSQVGEEETSQKMKKMVYVFDSMTKEELES-DG-RMFIEQPSRMVRVARGSGTSVL 420
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 421 EVEMILMQ 428
>gi|320100244|ref|YP_004175836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
gi|319752596|gb|ADV64354.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
Length = 450
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 10 CHYLNFPLYCG-ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMK 68
N P + I +GDIE LI+KV ++LD EE ++ G+ +R +Y+Q ++ K
Sbjct: 277 LEVFNPPRFVSRILGLGDIESLIEKVRRVQLDFTEEDARRLIEGKVNMRLVYKQLVSLRK 336
Query: 69 MGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG 128
MGP +IM MIPG + ++ ++ + + I++SM ELDN D + +
Sbjct: 337 MGPLGKIMQMIPGLGVKIPFEVDSKQLEEKMSKWLAIINSMTYEELDNPD---IIDRS-- 391
Query: 129 RITRVAQGAGVTEKEVKDLISQY 151
R+ R+A+GAGV ++VK+L+ QY
Sbjct: 392 RMKRIARGAGVEVEDVKELLKQY 414
>gi|367012263|ref|XP_003680632.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
gi|359748291|emb|CCE91421.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
Length = 527
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L+++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 303 IGDIESLLEQFQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 362
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +S+ E+E+ ++K+++ ++DSM EL++ DG ++F Q R+ RVA+G+G +
Sbjct: 363 G-NMMSQVGEEETSKKMKKMVYVLDSMTREELES-DG-RIFIDQPSRMVRVARGSGTSVF 419
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 420 EVEMILMQ 427
>gi|401842173|gb|EJT44430.1| SRP54-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 539
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 305 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 364
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F +Q R+ RVA+G+G +
Sbjct: 365 S-NMMNQVGEEETSQKMKKMVYVLDSMTREELES-DG-RMFVEQPTRMVRVAKGSGTSVF 421
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 422 EVEMILMQ 429
>gi|432330521|ref|YP_007248664.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
gi|432137230|gb|AGB02157.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
Length = 442
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP-GF 82
MGD++ L+++ NE ++ + + + G+FTLRDMY+Q + + KMGP QIMGM+P G
Sbjct: 290 MGDLKALVERANE-AINPEDVDVNAMMKGKFTLRDMYKQLEALNKMGPLKQIMGMLPLGN 348
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
Q L +G + ++ R IMDSM ELD L + + R+ R+A GAG T
Sbjct: 349 MQ--LPEGVYDVTSTKMVRYRIIMDSMTAAELDE---PSLIN--SSRMQRIAHGAGATPD 401
Query: 143 EVKDLISQY 151
EV++LI Y
Sbjct: 402 EVRELIKYY 410
>gi|365757890|gb|EHM99761.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 427
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 193 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 252
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F +Q R+ RVA+G+G +
Sbjct: 253 S-NMMNQVGEEETSQKMKKMVYVLDSMTREELES-DG-RMFVEQPTRMVRVAKGSGTSVF 309
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 310 EVEMILMQ 317
>gi|218884721|ref|YP_002429103.1| GTP-binding signal recognition particle SRP54, G- domain-containing
protein [Desulfurococcus kamchatkensis 1221n]
gi|218766337|gb|ACL11736.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Desulfurococcus kamchatkensis 1221n]
Length = 449
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 10 CHYLNFPLYCG-ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMK 68
N P + I +GDIE L++KV L+LD EE +++ G+ +R +Y+Q ++ K
Sbjct: 277 LEVFNPPRFVSRILGLGDIESLVEKVRRLQLDFTEEDAKRLIEGKINMRLVYKQLVSLRK 336
Query: 69 MGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG 128
MGP ++IM MIPG + ++ +L + + ++SM EL+N D + K
Sbjct: 337 MGPLAKIMQMIPGLGVKLPLEVDPKQLEVKLSKWLAAINSMTYEELENPD---IIDK--S 391
Query: 129 RITRVAQGAGVTEKEVKDLISQY 151
RI R+A GAGV +V++L+ QY
Sbjct: 392 RIKRIAYGAGVEIDDVRELLKQY 414
>gi|390937784|ref|YP_006401522.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Desulfurococcus fermentans DSM 16532]
gi|390190891|gb|AFL65947.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Desulfurococcus fermentans DSM 16532]
Length = 451
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 10 CHYLNFPLYCG-ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMK 68
N P + I +GDIE L++KV L+LD EE +++ G+ +R +Y+Q ++ K
Sbjct: 279 LEVFNPPRFVSRILGLGDIESLVEKVRRLQLDFTEEDAKRLIEGKINMRLVYKQLVSLRK 338
Query: 69 MGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG 128
MGP ++IM MIPG + ++ +L + + ++SM EL+N D + K
Sbjct: 339 MGPLAKIMQMIPGLGVKLPLEVDPKQLEVKLSKWLAAINSMTYEELENPD---IIDK--S 393
Query: 129 RITRVAQGAGVTEKEVKDLISQY 151
RI R+A GAGV +V++L+ QY
Sbjct: 394 RIKRIAYGAGVEIDDVRELLKQY 416
>gi|156844088|ref|XP_001645108.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156115765|gb|EDO17250.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 577
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 307 IGDIESLFEQLQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNITQMIPGM 366
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ + +++ E+E+ ++K+++ ++DSM EL++ DG ++F Q R+ RVA+G+G +
Sbjct: 367 N-NLMNQVGEEETSQKMKKMIYVLDSMTKEELES-DG-RIFIDQPTRMVRVAKGSGTSVF 423
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 424 EVEMILMQ 431
>gi|45359114|ref|NP_988671.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis S2]
gi|74579561|sp|Q6LX03.1|SRP54_METMP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|45047989|emb|CAF31107.1| signal recognition particle protein SRP54 [Methanococcus
maripaludis S2]
Length = 450
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Query: 32 DKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGS 91
+K ++ + EE I+ I G+FTL ++Y Q + I KMGP QI+ MIPG + + K +
Sbjct: 304 EKTEDIMDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGN-MPKEA 362
Query: 92 EQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQY 151
Q + A+LKR +MDSM E +N + K T R+ R+A+GAGV ++E+KDL+ Y
Sbjct: 363 AQLTEAKLKRYKIMMDSMTMEEKENPELIK-----TSRLQRIAKGAGVKQEEIKDLLKYY 417
Query: 152 T 152
+
Sbjct: 418 S 418
>gi|331223009|ref|XP_003324178.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303168|gb|EFP79759.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 635
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 25/178 (14%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELKL----DDNEELIEKIKHGQFTLRDMYEQFQ 64
L + P + MGDI ++ + +L+ + EE+ ++I+ G FT+RD+ +Q
Sbjct: 300 LERFAPEPFISKLLGMGDIGEFLETMQDLQSATPSQNREEMRQRIERGVFTIRDLRDQMS 359
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMA-RLKRLMTIMDSMNDGELDNRDGAKLF 123
N+ +MG S+I MIPG S G + + M+ ++KR++ I D+M+ ELD+ DG+ +F
Sbjct: 360 NLTQMGSISKIASMIPGMSNMMAGLGGDGDEMSQKMKRMVFIFDAMSPQELDS-DGS-IF 417
Query: 124 SK--QTG----------------RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
K +TG R+ R+A+G+G + EV+ +++Q+ FA +VK GG
Sbjct: 418 RKKRRTGDNTRQLADGEPREPHPRVLRIARGSGTSVDEVEGMLAQHAMFATMVKGAGG 475
>gi|363751038|ref|XP_003645736.1| hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889370|gb|AET38919.1| Hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
Length = 536
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L+++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 302 IGDIESLLEQFKTVSNKEDTKATMENIQQGKFTLLDFQKQMQTIMKMGPLSNIASMIPGL 361
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ ++ +E+E+ ++K+++ ++DSM EL++ DG ++ Q R+ RVA+G+G +
Sbjct: 362 G-NMMNSVTEEETSKKMKKMVYVLDSMTKEELES-DG-RILIDQPSRLIRVARGSGTSVF 418
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 419 EVEMILMQ 426
>gi|374629551|ref|ZP_09701936.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
gi|373907664|gb|EHQ35768.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
Length = 439
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 15/149 (10%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP--- 80
MGD++ LI+K E+ + D E + + G+FTLRDMY+Q +++ KMGP Q+M M+P
Sbjct: 290 MGDLKSLIEKAEEV-MADEEFDVNAMMKGKFTLRDMYKQLESLKKMGPLKQVMSMLPMGG 348
Query: 81 -GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
+D S +++R IMDSM + EL+N + S R+ R++ GAG
Sbjct: 349 AKIPEDVFDTTS-----VKMERYKIIMDSMTNDELEN---PSVISGS--RVHRISLGAGA 398
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLF 168
T +EV++L+ Y +K G G F
Sbjct: 399 TPEEVRELLKYYKTMQRAIKGFRGAGGKF 427
>gi|224084412|ref|XP_002335343.1| predicted protein [Populus trichocarpa]
gi|222833644|gb|EEE72121.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 80/127 (62%), Gaps = 12/127 (9%)
Query: 78 MIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
M+PGFS + + KG E+ES A++KR MT+MDSM + ELD+ + KL + R+ R+A+GA
Sbjct: 1 MLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTNEELDSSN-PKLLN--DSRMMRIARGA 57
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG--GDITKNVNQTQMMKLNQQMAKMMDP 195
G ++V +++ +Y + A V +M G+K KG +++N+N Q M K++ P
Sbjct: 58 GRPIRDVMEMLEEYKRLAKVWSEMKGLKIPEKGEMSSLSRNMNA-------QHMNKVLPP 110
Query: 196 RVLHQMG 202
++L Q+G
Sbjct: 111 QMLKQLG 117
>gi|404497721|ref|YP_006721827.1| signal recognition particle protein [Geobacter metallireducens
GS-15]
gi|418068002|ref|ZP_12705326.1| signal recognition particle protein [Geobacter metallireducens
RCH3]
gi|78195323|gb|ABB33090.1| signal recognition particle protein [Geobacter metallireducens
GS-15]
gi|373557781|gb|EHP84167.1| signal recognition particle protein [Geobacter metallireducens
RCH3]
Length = 452
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 17 LYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGDI L++K + E L +K+K QF L D Q Q I KMG I
Sbjct: 290 LVSRILGMGDILTLVEKAQATFDATETERLQQKLKKSQFDLEDFRSQLQQIKKMGSLESI 349
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR---DGAKLFSKQTGRITR 132
+GMIPG + Q S LKR+ I+DSM GE N +G+ R R
Sbjct: 350 LGMIPGVGKAMKQMQGAQPSEKELKRIEAIIDSMTPGERANHQIINGS--------RRLR 401
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKG 170
+A+G+G T +EV L+ ++T+ V+K++ G KGL +G
Sbjct: 402 IAKGSGTTVQEVNQLLKRFTEAQKVMKQLQKMGPKGLMRG 441
>gi|365762561|gb|EHN04095.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 510
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 274 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 333
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F ++ R+ RVA+G+G +
Sbjct: 334 S-NMMNQVGEEETSQKMKKMVYVLDSMTKEELES-DG-RMFIEEPTRMVRVAKGSGTSVF 390
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 391 EVEMILMQ 398
>gi|116753684|ref|YP_842802.1| signal recognition particle protein Srp54 [Methanosaeta thermophila
PT]
gi|121693787|sp|A0B638.1|SRP54_METTP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|116665135|gb|ABK14162.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanosaeta
thermophila PT]
Length = 444
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%), Gaps = 7/141 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP-GF 82
MGDI+GLI+K E++++ + + ++ + G+FTL+DMY+Q + + KMGP QIM M+P G
Sbjct: 291 MGDIKGLIEKAQEVQIESDVD-VDAMMKGKFTLKDMYKQLEAMNKMGPLKQIMQMLPFGG 349
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
LS Q + RL+ IMDSM D EL++ K+ + RI R+A+G+G +
Sbjct: 350 IGIELSDKEYQVTKERLEAYRFIMDSMTDEELED---PKIIN--ASRIKRIARGSGTRPE 404
Query: 143 EVKDLISQYTKFAAVVKKMGG 163
VK+L+ + +K M G
Sbjct: 405 LVKELLKSHAAMQKAIKGMRG 425
>gi|323306831|gb|EGA60116.1| Srp54p [Saccharomyces cerevisiae FostersO]
Length = 547
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 305 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 364
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F ++ R+ RVA+G+G +
Sbjct: 365 S-NMMNQVGEEETSQKMKKMVYVLDSMTKEELES-DG-RMFIEEPTRMVRVAKGSGTSVF 421
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 422 EVEMILMQ 429
>gi|207340327|gb|EDZ68711.1| YPR088Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 541
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 305 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 364
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F ++ R+ RVA+G+G +
Sbjct: 365 S-NMMNQVGEEETSQKMKKMVYVLDSMTKEELES-DG-RMFIEEPTRMVRVAKGSGTSVF 421
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 422 EVEMILMQ 429
>gi|323302581|gb|EGA56388.1| Srp54p [Saccharomyces cerevisiae FostersB]
Length = 452
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 305 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 364
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F ++ R+ RVA+G+G +
Sbjct: 365 S-NMMNQVGEEETSQKMKKMVYVLDSMTKEELES-DG-RMFIEEPTRMVRVAKGSGTSVF 421
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 422 EVEMILMQ 429
>gi|6325345|ref|NP_015413.1| Srp54p [Saccharomyces cerevisiae S288c]
gi|1711516|sp|P20424.2|SRP54_YEAST RecName: Full=Signal recognition particle subunit SRP54; AltName:
Full=Signal recognition particle 54 kDa protein homolog
gi|4542|emb|CAA35952.1| signal recognition particle [Saccharomyces cerevisiae]
gi|172705|gb|AAA35092.1| signal recognition particle 54 kDa subunit [Saccharomyces
cerevisiae]
gi|1230693|gb|AAB68136.1| Srp54p: Signal recognition particle 54 kd subunit (Swiss Prot.
accession number P20424) [Saccharomyces cerevisiae]
gi|151942868|gb|EDN61214.1| Signal recognition particle (SRP) subunit [Saccharomyces cerevisiae
YJM789]
gi|256272197|gb|EEU07192.1| Srp54p [Saccharomyces cerevisiae JAY291]
gi|259150240|emb|CAY87043.1| Srp54p [Saccharomyces cerevisiae EC1118]
gi|285815613|tpg|DAA11505.1| TPA: Srp54p [Saccharomyces cerevisiae S288c]
gi|323331335|gb|EGA72753.1| Srp54p [Saccharomyces cerevisiae AWRI796]
gi|323335166|gb|EGA76456.1| Srp54p [Saccharomyces cerevisiae Vin13]
gi|323346316|gb|EGA80606.1| Srp54p [Saccharomyces cerevisiae Lalvin QA23]
gi|323350224|gb|EGA84371.1| Srp54p [Saccharomyces cerevisiae VL3]
gi|349581893|dbj|GAA27050.1| K7_Srp54p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296095|gb|EIW07198.1| Srp54p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|226740|prf||1604366B signal recognition particle 54kD protein
Length = 541
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 305 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 364
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F ++ R+ RVA+G+G +
Sbjct: 365 S-NMMNQVGEEETSQKMKKMVYVLDSMTKEELES-DG-RMFIEEPTRMVRVAKGSGTSVF 421
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 422 EVEMILMQ 429
>gi|4538|emb|CAA34781.1| Srh1p [Saccharomyces cerevisiae]
Length = 541
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 305 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 364
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F ++ R+ RVA+G+G +
Sbjct: 365 S-NMMNQVGEEETSQKMKKMVYVLDSMTKEELES-DG-RMFIEEPTRMVRVAKGSGTSVF 421
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 422 EVEMILMQ 429
>gi|262303837|gb|ACY44511.1| signal recognition particle [Periplaneta americana]
Length = 101
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|262303845|gb|ACY44515.1| signal recognition particle [Peripatoides novaezealandiae]
Length = 101
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLLVMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|262303773|gb|ACY44479.1| signal recognition particle [Ctenolepisma lineata]
Length = 101
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|262303829|gb|ACY44507.1| signal recognition particle [Machiloides banksi]
gi|262303849|gb|ACY44517.1| signal recognition particle [Pedetontus saltator]
Length = 101
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|157813186|gb|ABV81338.1| putative signal recognition particle protein [Forficula
auricularia]
gi|262303833|gb|ACY44509.1| signal recognition particle [Nicoletia meinerti]
Length = 101
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|134045071|ref|YP_001096557.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C5]
gi|166222335|sp|A4FVX4.1|SRP54_METM5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|132662696|gb|ABO34342.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanococcus maripaludis C5]
Length = 450
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Query: 32 DKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGS 91
+K ++ + EE I+ I G+FTL ++Y Q + I KMGP QI+ MIPG + L K +
Sbjct: 304 EKTEDIMDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGN-LPKEA 362
Query: 92 EQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQY 151
Q + +LKR +MDSM L+ ++ +L +T R+ R+A+GAGV + E+KDL+ Y
Sbjct: 363 AQLTEDKLKRYKIMMDSMT---LEEKENPELI--KTSRLQRIAKGAGVKQDEIKDLLKYY 417
Query: 152 T 152
+
Sbjct: 418 S 418
>gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
Length = 442
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
Query: 21 ICCMGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD++ L++KV E+ ++ EE ++ I G+FTL+DM QF+ + KMGP Q+M M+
Sbjct: 290 LLGMGDLKSLLEKVEEVSDEELAEESLDAILSGKFTLKDMRVQFEMMGKMGPLQQVMNML 349
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + L K + + + +++ + IMDSM + EL+ D KQ+ RI R+++G+G
Sbjct: 350 PGVGK--LPKDATKMTEETIRKYLIIMDSMTEEELEKPD----IIKQS-RIRRISRGSGT 402
Query: 140 TEKEVKDLISQYTKFAAVVK-----KMGGIKG 166
++VK+L+ Y +K KMGG G
Sbjct: 403 RNEDVKELLKYYRVTRKAMKGLGRRKMGGPMG 434
>gi|365857004|ref|ZP_09397006.1| signal recognition particle protein [Acetobacteraceae bacterium
AT-5844]
gi|363716997|gb|EHM00386.1| signal recognition particle protein [Acetobacteraceae bacterium
AT-5844]
Length = 461
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L++K E + D+ E+L K++ GQF L D Q + I KMG S I+GM+
Sbjct: 298 ILGMGDIVSLVEKAAETIDRDEAEKLAAKMQKGQFDLEDYASQLKQIGKMGSLSGILGML 357
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + + LKR I+ SM E N D K K+ R+A GAGV
Sbjct: 358 PGIGKLKAQIDESKLDNSILKRQAAIIGSMTVKERRNPDILKASRKK-----RIAAGAGV 412
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGI--KGLFKGG 171
+ +EV L+ Q+ +A++K+M I KGL +GG
Sbjct: 413 SVQEVNRLLKQFDDMSAMMKRMSKIGQKGLMRGG 446
>gi|283768302|ref|ZP_06341214.1| signal recognition particle protein [Bulleidia extructa W1219]
gi|283104694|gb|EFC06066.1| signal recognition particle protein [Bulleidia extructa W1219]
Length = 466
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K E L +++N L EK+ +GQFT+ DM QF+ I KMGP I+ MI
Sbjct: 295 ILGMGDVVSLVEKAQEKLDMEENARLAEKMMNGQFTMGDMLRQFEQIQKMGPLGGILKMI 354
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG +Q L + +SMA +K I+ SM E D + K+ R+A G+
Sbjct: 355 PGMNQYAGMLDEAKAGKSMAHMK---AIIQSMTPYERAFPDKMRGSMKK-----RIASGS 406
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGI 164
G T EV LI+Q+ K ++ MGG+
Sbjct: 407 GRTVDEVNKLINQFNKMKKLMDAMGGL 433
>gi|84490317|ref|YP_448549.1| signal recognition particle protein Srp54 [Methanosphaera
stadtmanae DSM 3091]
gi|121731822|sp|Q2NE47.1|SRP54_METST RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|84373636|gb|ABC57906.1| signal recognition particle, 54 kDa protein [Methanosphaera
stadtmanae DSM 3091]
Length = 444
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 24 MGDIEGLIDKVNELKLD-DNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGD++ LI+K E+ + ++E+I+ I G+FTL+DM Q + + KMGP QIM +IPG
Sbjct: 294 MGDLDTLIEKAAEVTSEKSDKEMIDSIISGKFTLKDMENQLEMMNKMGPIQQIMKLIPGL 353
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ S + + +L +M+SM EL+N + K RI R+++GAG+T
Sbjct: 354 GNQLPANAS-KVTEEKLGMYKILMNSMTTYELENPEVIK-----KSRINRISRGAGLTND 407
Query: 143 EVKDLISQYTKFAAVVKKMG 162
+VKDL+ Y +K MG
Sbjct: 408 DVKDLLKYYNVTKKALKGMG 427
>gi|262303817|gb|ACY44501.1| signal recognition particle [Limnadia lenticularis]
Length = 101
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + +GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGLGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|262303799|gb|ACY44492.1| signal recognition particle [Euperipatoides rowelli]
gi|262303839|gb|ACY44512.1| signal recognition particle [Peripatus sp. 'Pep']
Length = 101
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|60623872|ref|NP_377232.2| signal recognition particle protein [Sulfolobus tokodaii str. 7]
gi|28380160|sp|Q971S9.2|SRP54_SULTO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|342306424|dbj|BAK54513.1| signal recognition particle 54 kDa protein [Sulfolobus tokodaii
str. 7]
Length = 445
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 92/159 (57%), Gaps = 18/159 (11%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKH-----GQFTLRDMYEQFQNIMKMGPFSQI 75
I MGDIE +I+K+ +++ E++ +K++ + TLRD+Y+Q + KMGP ++I
Sbjct: 290 ILGMGDIESIIEKIK--GMEEYEQIQKKMEEVMSGKAKLTLRDIYKQLTALRKMGPLNKI 347
Query: 76 MGMIPGFSQDFLSKGSEQESMA--RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
+ M+PGF F EQ + ++K+ + IM+SM ELDN + K RI R+
Sbjct: 348 LQMLPGFGV-FSQIPEEQLKLGEEKIKKFLVIMNSMTYKELDN---PSIIDKS--RIRRI 401
Query: 134 AQGAGVTEKEVKDLISQY---TKFAAVVKKMGGIKGLFK 169
A+G+G + +EVK+L+ QY +VK+ G+ LF+
Sbjct: 402 AKGSGTSPEEVKELLKQYQVTNNLLKMVKRRKGLAKLFE 440
>gi|262303801|gb|ACY44493.1| signal recognition particle [Eurypauropus spinosus]
Length = 101
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|262303855|gb|ACY44520.1| signal recognition particle [Scutigerella sp. 'Scu3']
Length = 101
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|262303785|gb|ACY44485.1| signal recognition particle [Daphnia magna]
Length = 101
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + +GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFISKLLGLGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|401623147|gb|EJS41254.1| srp54p [Saccharomyces arboricola H-6]
Length = 543
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDIE L +++ + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 305 IGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 364
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
S + +++ E+E+ ++K+++ ++DSM EL++ DG ++F + R+ RVA+G+G +
Sbjct: 365 S-NMMNQVGEEETSQKMKKMVYVLDSMTREELES-DG-RMFIDEPTRMVRVAKGSGTSVF 421
Query: 143 EVKDLISQ 150
EV+ ++ Q
Sbjct: 422 EVEMILMQ 429
>gi|157813202|gb|ABV81346.1| putative signal recognition particle protein [Speleonectes
tulumensis]
Length = 101
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEKI+HGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKIRHGQFTLRDMYE 101
>gi|123974885|ref|XP_001314049.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121896072|gb|EAY01234.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 482
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Query: 19 CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
I D + L+ K+ + +D EL ++I GQ+ R+MYEQ++ I+ MG + I+
Sbjct: 291 ANILGYADPKALMHKLEVVDMDKQAELAQRIMKGQYGFREMYEQYKTILDMGDITGIINA 350
Query: 79 IPGFSQDFLSKGSEQESM-ARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
+ + L KG + M + LK+ + I+DSM+D E+D+ LF K+ RI R+++G
Sbjct: 351 VG--MKSLLPKGFSNDDMTSTLKKYLVIIDSMSDKEMDD---PSLF-KEKNRIVRISRGT 404
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRV 197
G+ + ++ +I + FA K K + ++Q +MM+ QQMAK ++P +
Sbjct: 405 GMKTEMIEMVIKEQKNFAQAFKAFSKNKMFSNMLQNSGKMSQNEMMQAAQQMAKNINPGL 464
Query: 198 LHQM 201
Q+
Sbjct: 465 AKQL 468
>gi|262303857|gb|ACY44521.1| signal recognition particle [Scolopendra polymorpha]
Length = 101
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLMGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|328861050|gb|EGG10154.1| hypothetical protein MELLADRAFT_115576 [Melampsora larici-populina
98AG31]
Length = 617
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 26/177 (14%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLIDKVNELKLDDNEE----LIEKIKHGQFTLRDMYEQFQ 64
L + P + M D++G ++K+ +L+ + E+++ G+FTLRD+ +Q
Sbjct: 297 LERFSPGPFISKVLGMADVDGFLEKMQDLQQSTPAHKREEMRERMERGEFTLRDLRDQMT 356
Query: 65 NIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFS 124
N+ +MGP S+I MIPG F G++ + +++KR++ I D+M+ ELD+ DG +LF
Sbjct: 357 NVAQMGPLSKIASMIPGMGAMF--GGNDDDMSSKMKRMLFIFDAMSPKELDS-DG-QLFR 412
Query: 125 KQTG------------------RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG 163
RI R+A+G+G + EV+ +I+Q+ A +VK GG
Sbjct: 413 APKAQKKDTNGMDEGVPREPHPRILRIARGSGTSVDEVEAMIAQHVMVATMVKTAGG 469
>gi|262303841|gb|ACY44513.1| signal recognition particle [Polyzonium germanicum]
Length = 101
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|157813196|gb|ABV81343.1| putative signal recognition particle protein [Narceus americanus]
Length = 101
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|403214075|emb|CCK68576.1| hypothetical protein KNAG_0B01290 [Kazachstania naganishii CBS
8797]
Length = 537
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
Query: 24 MGDIEGLIDKVNELK-LDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GD EGL+++ + +D + L+E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 303 IGDFEGLMEQFQTISNKEDTQALLENIQQGKFTLLDFQKQMQTIMKMGPLSNIAQMIPGM 362
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +++ E E+ +K+++ ++DSM EL++ DG + F + R+ RVA+G+G +
Sbjct: 363 G-NMMNQIGEDEASKSMKKMVYMLDSMTKRELES-DG-RCFIDEPSRMVRVARGSGTSVF 419
Query: 143 EVKDLISQ 150
+V+ L+ Q
Sbjct: 420 DVETLLMQ 427
>gi|262303803|gb|ACY44494.1| signal recognition particle [Hanseniella sp. 'Han2']
Length = 101
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|147919502|ref|YP_686758.1| signal recognition particle protein Srp54 [Methanocella arvoryzae
MRE50]
gi|121687852|sp|Q0W2G1.1|SRP54_UNCMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|110622154|emb|CAJ37432.1| signal recognition particle [Methanocella arvoryzae MRE50]
Length = 444
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP--- 80
MGD+ L+++ NE+ L ++ +EK+ G+FTL DMY+Q + I KMGP QIM M+P
Sbjct: 291 MGDLRALVERANEV-LQKDDVNVEKMMQGKFTLNDMYDQLEAINKMGPLKQIMSMLPLGG 349
Query: 81 --GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
G D + K ++ +LK IMDSM E RD KL + RI RVA G+G
Sbjct: 350 LGGNITDDMYKMTQD----KLKGYKVIMDSMTAAE---RDDPKLIG--SSRIARVAHGSG 400
Query: 139 VTEKEVKDLISQY 151
+ +EV++L+ +
Sbjct: 401 KSPEEVRELLKYH 413
>gi|340624864|ref|YP_004743317.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
gi|339905132|gb|AEK20574.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
Length = 450
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 32 DKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGS 91
+K ++ + EE I+ I G+FTL ++Y Q + I KMGP QI+ MIPG + + K +
Sbjct: 304 EKTEDIMDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGN-MPKEA 362
Query: 92 EQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQY 151
Q + +LKR +MDSM E +N + K T R+ R+A+GAGV ++E+KDL+ Y
Sbjct: 363 AQLTEDKLKRYKIMMDSMTMEEKENPELIK-----TSRLQRIAKGAGVKQEEIKDLLKYY 417
Query: 152 T 152
+
Sbjct: 418 S 418
>gi|337283719|ref|YP_004623193.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
gi|334899653|gb|AEH23921.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
Length = 443
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 42 NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG----FSQDFLSKGSEQESMA 97
+E+ +E+ G+FTL+DMY Q + + KMGP QI+ MIPG + +S G E
Sbjct: 316 SEKDVERFLKGKFTLKDMYAQLEAMQKMGPLKQILRMIPGLGYSLPDEVISVGEE----- 370
Query: 98 RLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAV 157
RLK+ IMDSM + EL+N G +S R+ R+A+G+G + K+VK+L+ QY +
Sbjct: 371 RLKKFRVIMDSMTEEELEN-PGIINYS----RMKRIARGSGTSVKDVKELLEQYKQMKRF 425
Query: 158 VKKM 161
K M
Sbjct: 426 FKTM 429
>gi|262303781|gb|ACY44483.1| signal recognition particle [Craterostigmus tasmanianus]
Length = 101
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLMGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|126179907|ref|YP_001047872.1| signal recognition particle protein Srp54 [Methanoculleus
marisnigri JR1]
gi|125862701|gb|ABN57890.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoculleus marisnigri JR1]
Length = 443
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L+++ E ++ ++ +K G+FTLRDMY+Q + + KMGP QIM M+P
Sbjct: 291 MGDLKALVERAEEAVSGEDLDVNAMLK-GKFTLRDMYKQLEALNKMGPLKQIMSMLPLGG 349
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ S +++R IMDSM ELD D + L S RI R+A+GAGVT +
Sbjct: 350 MQIPDDAYDITS-TKMQRYKVIMDSMTPPELD--DPSTLGSS---RIQRIARGAGVTPDD 403
Query: 144 VKDLISQY 151
V+DLI Y
Sbjct: 404 VRDLIKYY 411
>gi|262303825|gb|ACY44505.1| signal recognition particle [Lynceus sp. 'Lyn']
Length = 101
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + +GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFISKLLGLGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|328874643|gb|EGG23008.1| signal recognition particle 54 kDa subunit [Dictyostelium
fasciculatum]
Length = 502
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ +GD+ G+++ + ++ D E + G FT R+M +QFQ IM MGP +I+ M P
Sbjct: 294 LLGLGDVNGMVEMIQDVVPPDPNAWKE-MSEGNFTFRNMKQQFQQIMNMGPIEKIVQMFP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + +G E +LK MTI+DSM D ELD + R+ R+A+G+G
Sbjct: 353 GMSNMPMLQGGEGN--LKLKAYMTILDSMTDDELDGKK-----QMNPSRMLRIARGSGRH 405
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLF------KGGDITKNVNQTQMMKLNQQMAKMMD 194
+EV +L Q F + KK GG+ L KGG + N QQ+A M+
Sbjct: 406 PREVGELTEQKKMFEKMFKKGGGLSNLANMAGGGKGGQMPNPKNL-------QQLAGMVP 458
Query: 195 P 195
P
Sbjct: 459 P 459
>gi|70607071|ref|YP_255941.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449067310|ref|YP_007434392.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449069580|ref|YP_007436661.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
gi|73920792|sp|O07853.2|SRP54_SULAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68567719|gb|AAY80648.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449035818|gb|AGE71244.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449038088|gb|AGE73513.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
Length = 444
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 16/161 (9%)
Query: 21 ICCMGDIEGLIDKVNELKLDDN-EELIEKIKHGQ--FTLRDMYEQFQNIMKMGPFSQIMG 77
+ +GDIE +I+K+ ++ +N E+ +E + G+ TLRD+Y+Q + KMGP +I
Sbjct: 290 LLGLGDIESIIEKIKSVEDYENLEKRMEDVISGKTKLTLRDIYKQLIALRKMGPLGKIFQ 349
Query: 78 MIPGFSQDFLSKGSEQE---SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
M+PG LS+ E++ +++ M IM+SM ELDN + K R+ R+A
Sbjct: 350 MLPGAG--ILSQVPEEQLKLGEEKIRTFMAIMNSMTYKELDN---PSIIDK--ARMRRIA 402
Query: 135 QGAGVTEKEVKDLISQY---TKFAAVVKKMGGIKGLFKGGD 172
+GAGVT +EVK+L+ QY +VK+ G+ LF G +
Sbjct: 403 KGAGVTVEEVKELLKQYQMTNNLLKMVKRRKGLAKLFGGSN 443
>gi|390960743|ref|YP_006424577.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
gi|390519051|gb|AFL94783.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
Length = 448
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ MGDIEGL++K+ EL+ EE +EK G+F L+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGMGDIEGLLEKLEELQKQQEFKEEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG D + G E +LKR IMDSM + EL++ + RI R+A
Sbjct: 353 IPGLGYSLPDDAVKVGEE-----KLKRYRVIMDSMTEEELEHPEII-----NYSRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + EV++L++QY + + K M
Sbjct: 403 RGSGTSTAEVRELLNQYNQMKKMFKSM 429
>gi|2231060|emb|CAA73234.1| fifty-four homologue of SRP54 [Sulfolobus acidocaldarius]
Length = 446
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 16/161 (9%)
Query: 21 ICCMGDIEGLIDKVNELKLDDN-EELIEKIKHGQ--FTLRDMYEQFQNIMKMGPFSQIMG 77
+ +GDIE +I+K+ ++ +N E+ +E + G+ TLRD+Y+Q + KMGP +I
Sbjct: 292 LLGLGDIESIIEKIKSVEDYENLEKRMEDVISGKTKLTLRDIYKQLIALRKMGPLGKIFQ 351
Query: 78 MIPGFSQDFLSKGSEQE---SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
M+PG LS+ E++ +++ M IM+SM ELDN + K R+ R+A
Sbjct: 352 MLPGAG--ILSQVPEEQLKLGEEKIRTFMAIMNSMTYKELDN---PSIIDK--ARMRRIA 404
Query: 135 QGAGVTEKEVKDLISQY---TKFAAVVKKMGGIKGLFKGGD 172
+GAGVT +EVK+L+ QY +VK+ G+ LF G +
Sbjct: 405 KGAGVTVEEVKELLKQYQMTNNLLKMVKRRKGLAKLFGGSN 445
>gi|262303757|gb|ACY44471.1| signal recognition particle [Acheta domesticus]
Length = 101
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLD+NEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDENEELIEKIKHGQFTLRDMYE 101
>gi|296241780|ref|YP_003649267.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
gi|296094364|gb|ADG90315.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
Length = 448
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ GDIEGL+++V ++L+ E+ +E I G+ +R +Y+Q ++ KMGP +I+ MIP
Sbjct: 291 VLGYGDIEGLVERVKRIQLELTEKDVEDIMEGRLNMRLVYKQLVSLRKMGPLRKILQMIP 350
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G + ++ +L + + +++SM ELDN ++ K R+ R+A+GAGV
Sbjct: 351 GLGVKIPFEVDPKDLELKLSKWLAVINSMTYDELDN---PEIIDKS--RLKRIARGAGVD 405
Query: 141 EKEVKDLISQY 151
+ V++L+ QY
Sbjct: 406 AEYVRELLKQY 416
>gi|262303783|gb|ACY44484.1| signal recognition particle [Dinothrombium pandorae]
Length = 101
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|262303805|gb|ACY44495.1| signal recognition particle [Hadrurus arizonensis]
gi|262303807|gb|ACY44496.1| signal recognition particle [Heterometrus spinifer]
Length = 101
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|262303859|gb|ACY44522.1| signal recognition particle [Stenochrus portoricensis]
Length = 101
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|355571041|ref|ZP_09042311.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
gi|354826323|gb|EHF10539.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
Length = 440
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L++K E L E + + G+F+LRDMY Q + + +MGP QIM M+P +
Sbjct: 290 MGDLKALVEKAEE-TLAAAEVDVNAMLRGKFSLRDMYNQLEAVTRMGPLKQIMSMLPLGN 348
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + S +++R IMDSM E+D D + + S RI R+A+GAG + +E
Sbjct: 349 MEIPEDAYDITS-TKMQRYRIIMDSMTAAEMD--DPSVIGSS---RIQRIARGAGASPEE 402
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLF 168
V++L+ Y +K + G +G F
Sbjct: 403 VRELLRYYKMMKRALKGVRGGQGRF 427
>gi|395646259|ref|ZP_10434119.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
gi|395442999|gb|EJG07756.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
Length = 438
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L ++ E+ + D E + + G+FTLRDMY+Q + + KMGP Q+M M+P
Sbjct: 290 MGDLKALAERAEEV-MADEEMDVNAMLRGKFTLRDMYKQLETVNKMGPLKQVMSMLPLGG 348
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ S +++R +MDSM ELD+ ++ S R+ R+++GAGV+ ++
Sbjct: 349 MQIPDDAYDVTS-TKMERYKVVMDSMTSAELDD---PQIIS--GSRVHRISRGAGVSPED 402
Query: 144 VKDLISQYTKFAAVVKKMGGIK 165
V++L+ Y +K M G K
Sbjct: 403 VRELLKYYRVMQRALKGMRGSK 424
>gi|157813206|gb|ABV81348.1| putative signal recognition particle protein [Triops longicaudatus]
Length = 101
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + +GDIEGLIDKVN+LKLDDNEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGLGDIEGLIDKVNDLKLDDNEELIEKIKHGQFTLRDMYE 101
>gi|262303779|gb|ACY44482.1| signal recognition particle [Cryptocellus centralis]
gi|262303793|gb|ACY44489.1| signal recognition particle [Eremocosta gigasella]
Length = 101
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|262303851|gb|ACY44518.1| signal recognition particle [Prokoenenia wheeleri]
Length = 101
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|330507723|ref|YP_004384151.1| signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
gi|328928531|gb|AEB68333.1| Signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
Length = 445
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 13/144 (9%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP--- 80
MGDI+ LI++ E++ + E +E + G+FTL+DMY+Q + + K+GP QIM M+P
Sbjct: 291 MGDIKTLIERAQEVQTE-QEVDVESLMRGKFTLKDMYQQMEAMNKLGPLKQIMQMLPMGG 349
Query: 81 -GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
GF LS Q + RL + +MDSM ELD+ K+ + RI R++QG+G
Sbjct: 350 LGFE---LSDKEYQMTKDRLDKYRVVMDSMTAAELDD---PKIIT--ASRIKRISQGSGA 401
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
+ V++L+ + +K M G
Sbjct: 402 SPDLVRELLKSHQAMQKALKGMRG 425
>gi|157813194|gb|ABV81342.1| putative signal recognition particle protein [Mastigoproctus
giganteus]
Length = 101
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|157813188|gb|ABV81339.1| putative signal recognition particle protein [Lithobius forticatus]
Length = 101
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDN+ELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLMGMGDIEGLIDKVNELKLDDNDELIEKLKHGQFTLRDMYE 101
>gi|262303765|gb|ACY44475.1| signal recognition particle [Amblyomma sp. 'Amb2']
Length = 101
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|282165325|ref|YP_003357710.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
gi|282157639|dbj|BAI62727.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
Length = 442
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L++K NE+ L + +EK+ G+FTL DMY Q + I KMGP QIM M+P
Sbjct: 291 MGDLKALVEKANEV-LSQKDVNVEKMMTGKFTLNDMYSQLEAINKMGPLKQIMSMLPLGG 349
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + + + +++ IMDSM + D +D KL + RI R+A G+G ++
Sbjct: 350 LGNIPDDAYRMTQDKMQGYRIIMDSMTE---DEKDDPKLIG--SSRIARIAMGSGRAPED 404
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQ 179
V++L+ +Y K + K M G+KG GG KN+ +
Sbjct: 405 VRELL-KYHKM--MQKAMKGMKG---GGQSNKNLKK 434
>gi|262303853|gb|ACY44519.1| signal recognition particle [Scutigera coleoptrata]
Length = 101
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + +GDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMYE
Sbjct: 56 PFVSKLMGLGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMYE 101
>gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
Length = 443
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEEL--IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ +GDI+GL++K E++ + + +E+ G+FTL+DMY Q + + KMGP QI+ M
Sbjct: 293 LLGLGDIQGLLEKFKEIEKEIEIKEEDLERFLRGKFTLKDMYAQLEAMRKMGPLKQILRM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG + +S G E RL++ IMDSM + EL N + RI R+A
Sbjct: 353 IPGLGYSLPDELISVGEE-----RLRKFKVIMDSMTEEELMNPEII-----NYSRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + K+VK+L++QY + K M
Sbjct: 403 RGSGTSVKDVKELLNQYRQMKKFFKSM 429
>gi|341582011|ref|YP_004762503.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
gi|340809669|gb|AEK72826.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
Length = 448
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 85/147 (57%), Gaps = 16/147 (10%)
Query: 21 ICCMGDIEGLIDKVNELKLDD--NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ MGDIEGL++K+ EL+ +EE +EK G+F L+DMY Q + + KMGP Q++ M
Sbjct: 293 LLGMGDIEGLLEKLEELQKQQAVSEEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQVLQM 352
Query: 79 IPG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
IPG D + G E +L+R IMDSM + EL++ + RI R+A
Sbjct: 353 IPGLGYSLPDDAVRVGEE-----KLRRYRVIMDSMTEEELEHPEIINY-----SRIKRIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM 161
+G+G + EV++L++QY + + K M
Sbjct: 403 RGSGTSTAEVRELLNQYNQMKKMFKSM 429
>gi|429961678|gb|ELA41223.1| hypothetical protein VICG_01712 [Vittaforma corneae ATCC 50505]
Length = 399
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI+GLI++++ +++D E++IEK+ G+F L D + I+ +GP S+++ MIPG
Sbjct: 229 MGDIDGLIERLSSIEID-KEDVIEKLTTGKFRLIDFKNIYTQIVSLGPISKMLEMIPGLG 287
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ S + KR+M + DSM EL++ +F K+ RI RVA+G+G
Sbjct: 288 NMAIPDES------KFKRIMHMFDSMTRKELESN--GDVFLKEPSRIDRVARGSGTHRDL 339
Query: 144 VKDLISQYTKFAAVVKKM 161
V +++ + + ++++KK+
Sbjct: 340 VSEMLGNFRQMSSMMKKL 357
>gi|262303847|gb|ACY44516.1| signal recognition particle [Polyxenus fasciculatus]
Length = 100
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 39/45 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMY 60
P + MGDIEGLIDKVNELKLDDNEELIEK+KHGQFTLRDMY
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGQFTLRDMY 100
>gi|262303809|gb|ACY44497.1| signal recognition particle [Idiogaryops pumilis]
Length = 101
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNEL+LDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELRLDDNEELIEKLKHGEFTLRDMYE 101
>gi|397779468|ref|YP_006543941.1| Signal recognition 54 kDa protein [Methanoculleus bourgensis MS2]
gi|396937970|emb|CCJ35225.1| Signal recognition 54 kDa protein AltName: Full=SRP54
[Methanoculleus bourgensis MS2]
Length = 442
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L+++ E ++ ++ +K G+FTLRDMY+Q + + KMGP QIM M+P
Sbjct: 291 MGDLKALVERAEEAVSAEDIDVNAMLK-GKFTLRDMYKQLEALNKMGPLKQIMSMLPLGG 349
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ S ++ R IMDSM ELD D A + S R+ R+A+GAGV ++
Sbjct: 350 MQIPDDAYDITS-TKMARYKVIMDSMTPSELD--DPAVIGSS---RVQRIARGAGVAPED 403
Query: 144 VKDLISQY 151
V+DLI Y
Sbjct: 404 VRDLIKYY 411
>gi|262303821|gb|ACY44503.1| signal recognition particle [Leiobunum verrucosum]
Length = 101
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKHGEFTLRDMYE 101
>gi|262303861|gb|ACY44523.1| signal recognition particle [Tomocerus sp. 'Tom2']
Length = 101
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKL+DNEELIEKIKHG FTLRDMYE
Sbjct: 56 PFISKLLGMGDIEGLIDKVNELKLEDNEELIEKIKHGHFTLRDMYE 101
>gi|88604251|ref|YP_504429.1| signal recognition particle protein Srp54 [Methanospirillum
hungatei JF-1]
gi|88189713|gb|ABD42710.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanospirillum hungatei JF-1]
Length = 437
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L ++V E +D+ + + + G+FTLRDMY Q + + KMGP Q++ M+P
Sbjct: 289 MGDLKALAERVQE-SIDEQDIDVNAMLSGKFTLRDMYRQLEAVNKMGPLKQVLSMLPLGG 347
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
D ++ + + +++ + IMDSM ELD D L RI R+AQGAG +E
Sbjct: 348 MDLPTEALDV-TASKMGKYRVIMDSMTATELD--DPTVL---NGSRIQRIAQGAGAQLEE 401
Query: 144 VKDLISQYTKFAAVVKKM-GGIKGL 167
V++LI Y K + GG KG+
Sbjct: 402 VRELIKYYKMMKRTFKGLKGGEKGM 426
>gi|448354426|ref|ZP_21543183.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
gi|445637943|gb|ELY91090.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
Length = 493
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + +++D++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 319 LLGMGDLGQLAERVERAMEQTQIEDDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 378
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+ IMDSM D E K + K G +I
Sbjct: 379 DMIPGFGGGIKDQLPDDAMDVTQERMHSFSVIMDSMTDAE-------KEYPKAIGASQIE 431
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 432 RIARGSGTSEEQVRELLQQYKMMEKTIKQFQGM 464
>gi|262303843|gb|ACY44514.1| signal recognition particle [Phrynus marginemaculatus]
Length = 101
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKL+DNEELIEK+KHG+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLEDNEELIEKLKHGEFTLRDMYE 101
>gi|289581472|ref|YP_003479938.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Natrialba magadii ATCC 43099]
gi|448283112|ref|ZP_21474391.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
gi|289531025|gb|ADD05376.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrialba magadii ATCC 43099]
gi|445574820|gb|ELY29308.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
Length = 464
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + +++D++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTQIEDDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+ IMDSM D E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMHSFSVIMDSMTDAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEQVRELLQQYKMMEKTIKQFQGM 433
>gi|219851208|ref|YP_002465640.1| signal recognition particle protein Srp54 [Methanosphaerula
palustris E1-9c]
gi|219545467|gb|ACL15917.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosphaerula palustris E1-9c]
Length = 440
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ L+++ E ++ + + + G+FTLRDMY+Q + + KMGP QIM M+P +
Sbjct: 290 MGDLKALVERAEEAITTEDVD-VNSMLRGKFTLRDMYKQLEAVNKMGPLKQIMSMLPLGN 348
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
D + E ++ R IMDSM + ELD D A + S R+ R+A GAG + E
Sbjct: 349 VDIPNDVYEVTG-TKMVRYRIIMDSMTNEELD--DPAVIGSS---RMHRIATGAGASPDE 402
Query: 144 VKDLISQYTKFAAVVKKMGGIKGLF 168
V++L+ + +K M G G F
Sbjct: 403 VRELLRYHKTMQRALKGMRGAGGKF 427
>gi|289596592|ref|YP_003483288.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
gi|289534379|gb|ADD08726.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
Length = 449
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 95/164 (57%), Gaps = 7/164 (4%)
Query: 9 LCHYLNFPLYCGICCMGDIEGLID--KVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNI 66
L H+ + MGD+E L++ K ELK ++ E+++E++ G+F L+DMYE ++ +
Sbjct: 275 LEHFNPTRFISRLLGMGDLETLLETAKELELKEEEAEKVMERMMSGKFNLKDMYEIWEQM 334
Query: 67 MKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ 126
K G +I+ +P F + KG +ES +L++ IMDSM EL+N + K
Sbjct: 335 AKPGLLQKILYSLPFFKMGDIDKGMVEESEEKLRKYRIIMDSMTYEELENPEIIK----- 389
Query: 127 TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
+ RI R+A+G+G +E+EV+ L+ +Y + +K+M G + L +
Sbjct: 390 SSRIKRIARGSGRSEQEVRSLLKEYNRMKKTMKQMRGNRKLMRA 433
>gi|262303761|gb|ACY44473.1| signal recognition particle [Ammothea hilgendorfi]
Length = 101
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+K GQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKQGQFTLRDMYE 101
>gi|262303863|gb|ACY44524.1| signal recognition particle [Streptocephalus seali]
Length = 101
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + +GDIEGLIDKVNELKLD+NEELIEKIKHGQFTLRDMYE
Sbjct: 56 PFIKKLLGLGDIEGLIDKVNELKLDENEELIEKIKHGQFTLRDMYE 101
>gi|389860812|ref|YP_006363052.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
gi|388525716|gb|AFK50914.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
Length = 447
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%), Gaps = 5/148 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
I +GD+EGL+++V + K++ +E+ +E I G+ +R +Y+Q ++ KMGP +I+ MIP
Sbjct: 289 IMGLGDLEGLLERVKKAKVELSEKDVEDILEGRVNMRIVYKQLVSLRKMGPLRKILEMIP 348
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G + + ++++ + ++SM ELDN ++ K R+ R++ GAGV
Sbjct: 349 GLQVRMPVEVDSKTLEEKMEKWLAAINSMTYEELDN---PEVIDKS--RVKRISYGAGVD 403
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLF 168
++VK L+ QY ++ K++ K L
Sbjct: 404 PEDVKALLKQYEAVKSISKQLKRQKNLL 431
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 14/154 (9%)
Query: 16 PLY-----CGICCMGDIEGLIDKVNELKLDDNEELI--EKIKHGQFTLRDMYEQFQNIMK 68
P Y I MGDI L++K E+ +D+ E L EK+ G+FTL D +Q Q I +
Sbjct: 282 PFYPDRVASRILGMGDIVSLVEKAQEV-IDEKEALSMQEKLLSGEFTLEDFRKQLQMIQR 340
Query: 69 MGPFSQIMGMIPGF-SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQT 127
+GP Q++ MIPG SQ L + E +LKR+ I++SM E R+ A +
Sbjct: 341 LGPLQQVIRMIPGLGSQKILKQLEEVIDDKKLKRIEAIINSMTPEE--RRNHAII---NA 395
Query: 128 GRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKM 161
R R+A+G+G + KEV L+ Q+ + +K+M
Sbjct: 396 SRKRRIARGSGTSVKEVDALLKQFVQMKMAMKQM 429
>gi|262303775|gb|ACY44480.1| signal recognition particle [Nymphon unguiculatum-charcoti complex
sp. SEM-1997]
Length = 101
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+K GQFTLRDMYE
Sbjct: 56 PFISKLLGMGDIEGLIDKVNELKLDDNEELIEKLKQGQFTLRDMYE 101
>gi|448303902|ref|ZP_21493848.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
gi|445592529|gb|ELY46716.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
Length = 460
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + +++D++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTEIEDDDWEPEDMLSGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM D E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E+ V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTNEENVRELLQQYKMMEKTIKQFQGM 433
>gi|448712956|ref|ZP_21701886.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
gi|445789882|gb|EMA40556.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
Length = 463
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++ + E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEQTEIEEEDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++R IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGSGIKDQLPDDAMDVTQDRMRRFQVIMDSMTEAE-------KEYPKAIGQSQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V+ L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEDVRQLLEQYKMMEKTIKQFQGM 433
>gi|410084092|ref|XP_003959623.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
gi|372466215|emb|CCF60488.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
Length = 528
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
Query: 24 MGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GD+E L + + + +D + +E I+ G+FTL D +Q Q IMKMGP S I MIPG
Sbjct: 304 IGDMESLFETLQTVTNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGM 363
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ +++ E+E+ +K+++ ++DSM EL++ DG ++F + R+ RVA+G+G +
Sbjct: 364 G-NMMNQVGEEETSRSMKKMVYVLDSMTKEELES-DG-RIFIDEPSRMVRVARGSGTSVI 420
Query: 143 EVKDLISQYTKFAAVVKKMGGIKGLFKGG 171
+V+ ++ Q A + + + + GG
Sbjct: 421 DVEMILQQQQMMARMAQSVKAAQPGAAGG 449
>gi|448308178|ref|ZP_21498058.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
gi|445594431|gb|ELY48589.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
Length = 463
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + +++D++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTQVEDDDWEPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM D E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQDRMRTFSVIMDSMTDTE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEKVRELLEQYKMMEKTIKQFQGM 433
>gi|448357209|ref|ZP_21545915.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
gi|445650017|gb|ELZ02948.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
Length = 462
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + +++D++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTQIEDDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+ IMDSM D E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMTDAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEKVRELLQQYKMMEKTIKQFQGM 433
>gi|448380959|ref|ZP_21561316.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
gi|445663615|gb|ELZ16358.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
Length = 464
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPG +D L + + R++ IMDSM D E K + K G +I
Sbjct: 348 DMIPGLGGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE-------KEYPKAIGASQIQ 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E+EV++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEEVRELLQQYKMMERTIKQFQGM 433
>gi|383619954|ref|ZP_09946360.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|448696432|ref|ZP_21697906.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|445783638|gb|EMA34466.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
Length = 462
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMQQTEIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMRKFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTDEEDVRELLQQYKMMEKTIKQFQGM 433
>gi|262303797|gb|ACY44491.1| signal recognition particle [Endeis laevis]
Length = 101
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEEL+EK+K GQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELLEKLKQGQFTLRDMYE 101
>gi|262303813|gb|ACY44499.1| signal recognition particle [Metajapyx subterraneus]
Length = 101
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLI KVNELKLD+NEELI+KIKHGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLITKVNELKLDENEELIDKIKHGQFTLRDMYE 101
>gi|325968148|ref|YP_004244340.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
gi|323707351|gb|ADY00838.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
Length = 446
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 13/137 (9%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E LI+KV ++ +D +++E+I+ G+ L + +Q +IMK+GP S+IM ++P
Sbjct: 294 LLGMGDLEALIEKVRAIEEED--KIMEEIEEGKINLLTIKKQIDSIMKLGPLSKIMELLP 351
Query: 81 G------FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ L + + L+R I+DSM EL N + RI R+A
Sbjct: 352 ASMLPMQYRTVMLDEEKVSNAQEMLRRWRHILDSMTKEELLNPEII-----NASRIRRIA 406
Query: 135 QGAGVTEKEVKDLISQY 151
+GAGVT K+VK+L++ Y
Sbjct: 407 KGAGVTSKDVKELLNYY 423
>gi|448401706|ref|ZP_21571772.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
gi|445666396|gb|ELZ19062.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
Length = 463
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEQTEIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQQRMRTFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEQVRELLEQYKMMEKTIKQFQGM 433
>gi|336252741|ref|YP_004595848.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
gi|335336730|gb|AEH35969.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
Length = 464
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V E + ++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMLETETEEDDWDPEDMLQGQFTLHDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMRSFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E +V++L+ QY +K+ G+
Sbjct: 401 RIAKGSGTSEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|124486290|ref|YP_001030906.1| signal recognition particle protein Srp54 [Methanocorpusculum
labreanum Z]
gi|166222334|sp|A2STI3.1|SRP54_METLZ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|124363831|gb|ABN07639.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanocorpusculum labreanum Z]
Length = 446
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K E ++ + + + G+FTL DMY+Q + + KMGP Q++ M+P
Sbjct: 288 LLGMGDLKALVEKAEE-SMNAEDVDVNAMLRGKFTLNDMYKQLEAVQKMGPLKQVLSMLP 346
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
+ + S E + ++K+ IMDSM ELD L + T R+ RVA+G+G +
Sbjct: 347 MGNMNVPSDALEG-TADKMKKFRIIMDSMTPQELDE---PALIN--TSRMIRVAKGSGSS 400
Query: 141 EKEVKDLISQY 151
+EV+DLI Y
Sbjct: 401 VEEVRDLIKYY 411
>gi|157813190|gb|ABV81340.1| putative signal recognition particle protein [Limulus polyphemus]
gi|262303777|gb|ACY44481.1| signal recognition particle [Carcinoscorpius rotundicauda]
Length = 101
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEELIEK+K G+FTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDDNEELIEKLKQGEFTLRDMYE 101
>gi|172048109|sp|A5UMY7.2|SRP54_METS3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 445
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDI+ LI+K + + D E+ ++ + G+FTL DM QF+ + MGP Q++ MI
Sbjct: 290 LLGMGDIQTLIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMI 349
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG +SK + + + ++ IM SM E++N KL KQ+ RI R+A GAGV
Sbjct: 350 PGLGNK-VSKEASKMTEDKIDGYKVIMSSMTKKEMEN---PKLI-KQS-RIRRIAMGAGV 403
Query: 140 TEKEVKDLISQYTKFAAVVKKMG 162
E EV+DL+ Y +K +G
Sbjct: 404 EESEVRDLLKYYNNTKKTMKGIG 426
>gi|159117703|ref|XP_001709071.1| SRP GTPase [Giardia lamblia ATCC 50803]
gi|157437186|gb|EDO81397.1| SRP GTPase [Giardia lamblia ATCC 50803]
Length = 530
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 25 GDIEGLIDKVNELKLDDNEEL--IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
GDI GL + + +D + + ++ H F+ RD EQ +N+ KMGP +I M+PGF
Sbjct: 300 GDIVGLHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASMVPGF 359
Query: 83 SQDFLSKGSEQES-MARLKRLMTIMDSMNDGELDNRDGAKLFSKQ-----TGRITRVAQG 136
SQ S + +S + L+ TIMDSM ELD+ +L K+ R+ R+A G
Sbjct: 360 SQMAASGDIDMDSEVKHLQIFNTIMDSMAAKELDSN--TELLKKEGEDKFRSRVRRIAIG 417
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMG 162
+G T +EV + + T+F+ + KMG
Sbjct: 418 SGHTIEEVLEFFDKATEFSEIFGKMG 443
>gi|408380979|ref|ZP_11178529.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
gi|407816244|gb|EKF86806.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
Length = 443
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
Query: 21 ICCMGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDI LI++ E+ +D + E ++ + G+FTL+DMY QF+ + KMGP Q+M M+
Sbjct: 290 LLGMGDIRSLIERAEEIAEEDVDAEAMDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNML 349
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG L K + Q + +L + +MDSM + EL + + KQ+ R+ R+A+G+G+
Sbjct: 350 PGMGNK-LPKNASQVTEEKLSKYKILMDSMTEQELTHPE----IIKQS-RVKRIARGSGM 403
Query: 140 TEKEVKDLISQYTKFAAVVK-----KMGG 163
++VK+L+ Y +K KMGG
Sbjct: 404 RNEDVKELLKYYQVTKKAIKGFGKRKMGG 432
>gi|148643420|ref|YP_001273933.1| signal recognition particle protein Srp54 [Methanobrevibacter
smithii ATCC 35061]
gi|222445662|ref|ZP_03608177.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii
DSM 2375]
gi|288869608|ref|ZP_05975207.2| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
gi|148552437|gb|ABQ87565.1| signal recognition particle GTPase SRP54 [Methanobrevibacter
smithii ATCC 35061]
gi|222435227|gb|EEE42392.1| Signal peptide binding domain protein [Methanobrevibacter smithii
DSM 2375]
gi|288860574|gb|EFC92872.1| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
Length = 447
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDI+ LI+K + + D E+ ++ + G+FTL DM QF+ + MGP Q++ MI
Sbjct: 292 LLGMGDIQTLIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMI 351
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG +SK + + + ++ IM SM E++N KL KQ+ RI R+A GAGV
Sbjct: 352 PGLGNK-VSKEASKMTEDKIDGYKVIMSSMTKKEMEN---PKLI-KQS-RIRRIAMGAGV 405
Query: 140 TEKEVKDLISQYTKFAAVVKKMG 162
E EV+DL+ Y +K +G
Sbjct: 406 EESEVRDLLKYYNNTKKTMKGIG 428
>gi|344256359|gb|EGW12463.1| Signal recognition particle 54 kDa protein [Cricetulus griseus]
Length = 71
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 40/42 (95%)
Query: 161 MGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLHQMG 202
MGGIKGLFKGGD++KNV+Q+QM KLNQQMAKMMDPRVLH MG
Sbjct: 1 MGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMG 42
>gi|386003024|ref|YP_005921323.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
gi|357211080|gb|AET65700.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
Length = 446
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP--G 81
MGDI+ LI++ E K+++ + +E + G+FTL+DM +Q + I KMGP QIM M+P G
Sbjct: 291 MGDIKTLIERAQETKVEEEVD-VEALMRGKFTLKDMCKQMEAINKMGPLKQIMQMLPLGG 349
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
D LS Q + RL++ IM SM + EL++ K+ + RI R+++G+G
Sbjct: 350 MGLD-LSDQEYQVTKDRLEKYRVIMSSMTEAELED---PKIIT--ASRIKRISRGSGTPP 403
Query: 142 KEVKDLISQYTKFAAVVKKMGG 163
+ V++L+ + +K M G
Sbjct: 404 ELVRELLKSHKAMQKALKGMRG 425
>gi|288931995|ref|YP_003436055.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
gi|288894243|gb|ADC65780.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
Length = 431
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEEL-IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDI+ L++KV ++ EEL E G+FTL+D+Y+Q + + KMGP S+I M+
Sbjct: 283 LLGMGDIKALLEKVE--RIVKEEELDPEAFLKGKFTLKDVYKQLEAMNKMGPISKIFEML 340
Query: 80 P-GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
P GFS + E + ++K+ IMDSM + EL N K+ + RI R+A G+G
Sbjct: 341 PFGFSLKVDDEALEM-TQEKMKKFKVIMDSMTEEELLN---PKIID--SSRIRRIAIGSG 394
Query: 139 VTEKEVKDLISQYTKFAAVVKKM 161
T ++VK+L++ Y ++K++
Sbjct: 395 TTPQDVKELLNYYNTMKNLMKRL 417
>gi|262303759|gb|ACY44472.1| signal recognition particle [Achelia echinata]
Length = 101
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 38/46 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNEL LDDNEELIEK+K GQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELNLDDNEELIEKLKQGQFTLRDMYE 101
>gi|262303831|gb|ACY44508.1| signal recognition particle [Milnesium tardigradum]
Length = 101
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELK++DNEEL+EKIKHG+F+LRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKIEDNEELMEKIKHGEFSLRDMYE 101
>gi|354593878|ref|ZP_09011921.1| signal recognition particle protein [Commensalibacter intestini
A911]
gi|353672989|gb|EHD14685.1| signal recognition particle protein [Commensalibacter intestini
A911]
Length = 462
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I +GDI GL++K +E + +++E L +K+ G+F L D Q I KMG S IM M+
Sbjct: 295 ILGLGDIAGLVEKASETIDQEESERLAKKMLKGKFDLDDYSAQIAQINKMGSISNIMDMM 354
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + G+++ + LKR I+ SM E R + + R R+A G+G
Sbjct: 355 PGMGKMKEKLGNKELDTSILKRHQAIISSMTKAE---RKQPAII--KASRKKRIAAGSGS 409
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
T +EV L+ QY + A+++K+ G+KGL + G
Sbjct: 410 TVQEVNRLLKQYDQMASMMKRFNKLGVKGLMRQG 443
>gi|308162746|gb|EFO65124.1| SRP GTPase [Giardia lamblia P15]
Length = 530
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 25 GDIEGLIDKVNELKLDDNEEL--IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
GDI GL + + +D + + ++ H F+ RD EQ +N+ KMGP +I M+PGF
Sbjct: 300 GDIVGLHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASMVPGF 359
Query: 83 SQDFLSKGSEQES-MARLKRLMTIMDSMNDGELDNRDGAKLFSKQ-----TGRITRVAQG 136
SQ S + +S + L+ TIMDSM ELD+ +L K+ R+ R+A G
Sbjct: 360 SQMAASGDIDMDSEVKHLQIFNTIMDSMAAKELDSN--TELLRKEGEDKFRSRVKRIAIG 417
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMG 162
+G T EV + + T+F+ + KMG
Sbjct: 418 SGHTVDEVLEFFDKATEFSEIFGKMG 443
>gi|448388336|ref|ZP_21565191.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
gi|445670472|gb|ELZ23072.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
Length = 464
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + G FTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTEMEEDDWDPEDMLQGSFTLHDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQDRMRTFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G TE+EV++L+ QY +K+ G+
Sbjct: 401 RIARGSGTTEEEVRELLQQYKMMEKTIKQFQGM 433
>gi|62733121|gb|AAX95238.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
Length = 1072
Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 6/142 (4%)
Query: 24 MGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGD+ ++K E ++ +D EL +KI +F D +Q QN+ KMG S+++GMIPG
Sbjct: 356 MGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMIPGM 415
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
++ ++ E E KRL + +N + R+ +L ++ R RVA+ +G +E+
Sbjct: 416 NKVTPAQIREAE-----KRLAFVESMINAMTAEEREKPELLAESRDRRIRVAEESGKSEQ 470
Query: 143 EVKDLISQYTKFAAVVKKMGGI 164
EV L++Q + A ++K+ G+
Sbjct: 471 EVSQLVAQLFQMRAQMQKLMGV 492
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q Q I +MG FS+I+GMI
Sbjct: 791 ILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMI 850
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +E+ LK + ++++ M E R+ +L ++ R RVA+ +G
Sbjct: 851 PGMNK--VTPAQIREAEKNLKFMESMINVMTPEE---RERPELLAESRERRIRVAKESGK 905
Query: 140 TEKE 143
E++
Sbjct: 906 NERQ 909
>gi|290979105|ref|XP_002672275.1| predicted protein [Naegleria gruberi]
gi|284085850|gb|EFC39531.1| predicted protein [Naegleria gruberi]
Length = 484
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 51 HGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMN 110
+G FT+RD+ EQ +I+ MGP S+++ MI GFS+ +G E ++K+ +TIM SMN
Sbjct: 325 NGVFTMRDLKEQLLSIVNMGPPSRVLSMIFGFSEFPKIEGQEY----KVKKYLTIMGSMN 380
Query: 111 DGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAV 157
+ ELD D KL Q+ RI R+A+G+G K+V +L+ Y +F +
Sbjct: 381 ETELDCADFTKLSDMQS-RILRIARGSGKNSKDVVELLDNYKQFQST 426
>gi|157813208|gb|ABV81349.1| putative signal recognition particle protein [Tanystylum
orbiculare]
Length = 101
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 38/46 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNEL LDDNEELIEK+K GQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELHLDDNEELIEKLKQGQFTLRDMYE 101
>gi|347835298|emb|CCD49870.1| hypothetical protein [Botryotinia fuckeliana]
Length = 191
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 67 MKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQ 126
MKMGP S++ GMIPG + + +++ +LKR++ I DSM ELD+ DG K+F +Q
Sbjct: 1 MKMGPLSKMAGMIPGMG-NMMQGMDDEDGAMKLKRMIYICDSMTAKELDS-DG-KMFLEQ 57
Query: 127 TGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGG-IKGLFKGGDITKNVN-QTQMMK 184
R+TR+A G+G + +E++DL++Q+ A + K MGG +K + K N Q QM
Sbjct: 58 PTRMTRIACGSGTSVREIEDLLTQHKMMAGMAKTMGGSMKNMQKAQGAMGGANKQQQMAA 117
Query: 185 LNQQMAKM 192
+ +++A M
Sbjct: 118 MQKRLASM 125
>gi|156960074|gb|ABU98505.1| signal recognition particle 54 kDa subunit [Sympodium caeruleum]
gi|156960080|gb|ABU98508.1| signal recognition particle 54 kDa subunit [Ovabunda verseveldti]
Length = 44
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 40/44 (90%)
Query: 25 GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMK 68
G IEGL DKVNELKL+DNEELI K+K GQFTLRDMYEQFQNIMK
Sbjct: 1 GXIEGLXDKVNELKLEDNEELIGKLKQGQFTLRDMYEQFQNIMK 44
>gi|148265784|ref|YP_001232490.1| signal recognition particle protein [Geobacter uraniireducens Rf4]
gi|146399284|gb|ABQ27917.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geobacter
uraniireducens Rf4]
Length = 449
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 17 LYCGICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGD+ LI+K + + E L +K+K F L D Q Q + KMG I
Sbjct: 290 LVSRILGMGDVLTLIEKAQSTFDATEAERLQKKLKKSNFDLDDFKGQLQQLKKMGSLESI 349
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPG + Q S LKR+ I+DSM E N R R+A+
Sbjct: 350 MGMIPGMGKMMKQMQGAQPSERELKRIEAIIDSMTRAERANHS-----IINGSRRLRIAK 404
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKG 170
G+G + +EV L+ ++T+ VVK++ G KGL KG
Sbjct: 405 GSGTSVQEVNQLLKRFTEAQKVVKQLQKLGPKGLMKG 441
>gi|347522718|ref|YP_004780288.1| GTP-binding signal recognition particle SRP54 G- domain containing
protein [Pyrolobus fumarii 1A]
gi|343459600|gb|AEM38036.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Pyrolobus fumarii 1A]
Length = 445
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 89/150 (59%), Gaps = 13/150 (8%)
Query: 21 ICCMGDIEGLIDKVNELKL-DDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDIEG+++++ L+ ++ E+ +E++ G+ R +Y Q + + +MGP +++ M+
Sbjct: 293 LLGMGDIEGILERIKRLEAAEEFEKTVEEMLEGKLNFRILYRQLRQLTRMGPLRKVLQML 352
Query: 80 PGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQG 136
PG D ++K E+ ++++ + IMDSM ELD+ ++ K R+ R+A+G
Sbjct: 353 PGVGLAVTDEIAKLGEE----KIRKWLAIMDSMTYEELDH---PEIIDKS--RMRRIARG 403
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMGGIKG 166
AGV +VK+L++ Y +++++ KG
Sbjct: 404 AGVELDDVKELVNYYRNLQRMLRRLKKQKG 433
>gi|307596389|ref|YP_003902706.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Vulcanisaeta distributa DSM 14429]
gi|307551590|gb|ADN51655.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Vulcanisaeta distributa DSM 14429]
Length = 446
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 80/137 (58%), Gaps = 13/137 (9%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E LI+K+ +++ +++E+I+ G+ L + +Q +IMK+GP S+I+ ++P
Sbjct: 294 LLGMGDLEALIEKIR--AIEEESKIMEEIEEGKINLLTIKKQIDSIMKLGPLSKILELLP 351
Query: 81 G--FSQDFLSKGSEQESMAR----LKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
+ + ++E M+ L+R I+DSM EL N D RI R+A
Sbjct: 352 TSMLPMQYRAVMLDEEKMSNAQEMLRRWRHILDSMTKEELLNPDII-----NASRIRRIA 406
Query: 135 QGAGVTEKEVKDLISQY 151
+GAGVT K+VK+L++ Y
Sbjct: 407 KGAGVTPKDVKELLNYY 423
>gi|402697944|gb|AFQ91159.1| signal recognition particle 54kDa, partial [Apalone ferox]
Length = 103
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 89 KGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
KG+EQESM RLK+LMTI DSMND ELD+ DGAK+FSKQ GRI RVA+G+
Sbjct: 55 KGNEQESMXRLKKLMTIXDSMNDQELDSTDGAKVFSKQPGRIQRVARGS 103
>gi|433592885|ref|YP_007282381.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|448335331|ref|ZP_21524480.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
gi|433307665|gb|AGB33477.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|445617570|gb|ELY71166.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
Length = 463
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPG +D L + + R++ IMDSM D E K + K G +I
Sbjct: 348 DMIPGLGGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE-------KEYPKAIGASQIQ 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEQVRELLQQYKMMEKTIKQFQGM 433
>gi|383319835|ref|YP_005380676.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
gi|379321205|gb|AFD00158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
Length = 442
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 12/145 (8%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP--G 81
MGD++ L++K NE+ L + +EK+ G+FTL DMY Q + I KMGP QIM M+P G
Sbjct: 291 MGDLKALVEKANEV-LSQKDVNVEKMMSGRFTLNDMYAQLEAINKMGPLKQIMSMLPLGG 349
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
+ ++ + + +L IMDSM + E ++ KL + RI R+A+G+G +
Sbjct: 350 LGAN-ITDDVYKMTQDKLLSYRIIMDSMTEAE---KEDPKLIG--SSRIMRIARGSGRSP 403
Query: 142 KEVKDLISQYTKFAAVVKKMGGIKG 166
++V++L+ +Y K + K M G+KG
Sbjct: 404 EDVRELL-KYHKM--MQKAMKGMKG 425
>gi|156960068|gb|ABU98502.1| signal recognition particle 54 kDa subunit [Xenia ternatana]
Length = 44
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 40/44 (90%)
Query: 25 GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMK 68
GDIEGL DKVNELKL+DNEELI K+K GQFTLRDMYEQFQ IMK
Sbjct: 1 GDIEGLXDKVNELKLEDNEELIGKLKQGQFTLRDMYEQFQXIMK 44
>gi|312137225|ref|YP_004004562.1| signal recognition particle subunit ffh/srp54 (srp54)
[Methanothermus fervidus DSM 2088]
gi|311224944|gb|ADP77800.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanothermus fervidus DSM 2088]
Length = 449
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 20/150 (13%)
Query: 24 MGDIEGLIDKVNELKLDDNE--ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP- 80
MGDI+ LI+K + ++++ E ++ + G+FTL+D+ QF+ + KMGP QI+ M+P
Sbjct: 299 MGDIKSLIEKFERVVEEEDKISETVDTMLSGKFTLKDLKTQFETMKKMGPLKQILNMLPL 358
Query: 81 --GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
++F SK +E ++K+ IMDSM + EL+N K R+ R+A+GAG
Sbjct: 359 AGNIPKNF-SKITED----KIKKYCVIMDSMTEEELENPRIIKY-----SRVKRIARGAG 408
Query: 139 VTEKEVKDLISQYTKFAAVVK-----KMGG 163
V ++V++L+ Y +K K+GG
Sbjct: 409 VRNEDVRELLRYYKTTKKALKGFERRKLGG 438
>gi|448611250|ref|ZP_21661884.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
gi|445743682|gb|ELZ95163.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
Length = 464
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 16/149 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V E + +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMTETQAEDEDWDPEEMMKGSFTLKDMQKQMEAMNKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ +MDSM D EL+N ++ G R+
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTKDRMRSFEVVMDSMTDEELEN-------PRKVGASRVR 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R+AQG+G E+ +++L+ Q+ +K+
Sbjct: 401 RIAQGSGQDEETIQELLEQHRMMEQTIKQ 429
>gi|410722282|ref|ZP_11361588.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
gi|410597317|gb|EKQ51944.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
Length = 443
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
Query: 21 ICCMGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDI LI++ E+ +D + E ++ + G+FTL+DMY QF+ + KMGP Q+M M+
Sbjct: 290 LLGMGDIRSLIERAEEIAEEDVDTEAMDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNML 349
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG L K + Q + +L + +MDSM + EL + + KQ+ R+ R+A+G+G+
Sbjct: 350 PGMGNK-LPKNASQVTEEKLGKYKILMDSMTEQELTHPE----IIKQS-RVKRIARGSGM 403
Query: 140 TEKEVKDLISQYTKFAAVVK-----KMGG 163
++VK+L+ Y +K KMGG
Sbjct: 404 RNEDVKELLKYYQVTKKAIKGFGKRKMGG 432
>gi|262303795|gb|ACY44490.1| signal recognition particle [Ephemerella inconstans]
Length = 101
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLIDKVNELKLDDNEEL++KI+ GQFTLRDMYE
Sbjct: 56 PFISKLLGMGDIEGLIDKVNELKLDDNEELMQKIRQGQFTLRDMYE 101
>gi|222054584|ref|YP_002536946.1| signal recognition particle protein [Geobacter daltonii FRC-32]
gi|221563873|gb|ACM19845.1| signal recognition particle protein [Geobacter daltonii FRC-32]
Length = 449
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 17 LYCGICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGD+ LI+K + + E L +K+K F L D Q Q + KMG I
Sbjct: 290 LVSRILGMGDVLTLIEKAQSTFDTKEAERLQKKLKKSNFDLDDFKAQLQQLKKMGSLESI 349
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR---DGAKLFSKQTGRITR 132
MGMIPG + Q S LKR+ I+DSM E N +G+ R R
Sbjct: 350 MGMIPGMGKMMKQMQGAQPSEKELKRIEAIIDSMTRQERANHQMINGS--------RRLR 401
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKG 170
+A+G+G + +EV L+ ++T+ VVK++ G KGL KG
Sbjct: 402 IAKGSGTSVQEVNQLLKRFTEAQKVVKQLQKLGPKGLMKG 441
>gi|144898174|emb|CAM75038.1| Signal recognition particle GTPase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 455
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 18/159 (11%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K E ++ D+ E+L ++I+ G+F L DM QF+ + KMG I+GM+
Sbjct: 293 ILGMGDVVSLVEKAMENIEQDEAEKLAKRIEKGKFDLNDMLSQFKQVEKMGDLKGIIGML 352
Query: 80 PGFSQDFLSKGSEQESMARLK-----RLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
PG L K + Q A++ R ++ SM E N D K K+ R+A
Sbjct: 353 PG-----LGKMANQLKDAKIDDKMVGRQKAVILSMTLAERKNPDLIKASRKK-----RIA 402
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
G+GV+ ++V L+ QY + A V+KK+G G KGL + G
Sbjct: 403 AGSGVSVQDVNKLLKQYQQMADVMKKVGKLGQKGLMRHG 441
>gi|307353993|ref|YP_003895044.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanoplanus petrolearius DSM 11571]
gi|307157226|gb|ADN36606.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanoplanus petrolearius DSM 11571]
Length = 441
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGD++ LI++ E ++ E + + G+FTLRDMY+Q +++ KMGP Q+M M+P
Sbjct: 290 MGDLKSLIERAEE-AINAEEVDVNAMMKGKFTLRDMYKQLESLKKMGPLKQVMSMLP-LG 347
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+ + + + +++ IMDSM + ELD+ RI R+A GAGV+++E
Sbjct: 348 NIEIPEDAFDTTGKKMEAYKVIMDSMTNEELDDPS-----VIHASRIQRIATGAGVSQEE 402
Query: 144 VKDLISQY 151
V++L+ +
Sbjct: 403 VRELLKYH 410
>gi|448607296|ref|ZP_21659441.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
gi|445738308|gb|ELZ89833.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
Length = 464
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V +E + +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMKGNFTLKDMQKQMEAMDKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + EL+N ++ G R+
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEAELEN-------PRKVGASRVK 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R+AQG+G E+ +++L+ Q+ +K+
Sbjct: 401 RIAQGSGQDEETIQELLEQHRMMEQTIKQ 429
>gi|284163555|ref|YP_003401834.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Haloterrigena turkmenica DSM 5511]
gi|284013210|gb|ADB59161.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Haloterrigena turkmenica DSM 5511]
Length = 463
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++ + E + G FTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTEMEEEDWDPEDMLQGSFTLHDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQDRMRTFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G TE+EV++L+ QY +K+ G+
Sbjct: 401 RIARGSGTTEEEVRELLQQYKMMEKTIKQFQGM 433
>gi|297526052|ref|YP_003668076.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Staphylothermus hellenicus DSM 12710]
gi|297254968|gb|ADI31177.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Staphylothermus hellenicus DSM 12710]
Length = 444
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
I +GD+EGL++KV +K++ E+ +E+ G+ +R +Y+Q ++ KMGP +I+ MIP
Sbjct: 293 ILGIGDLEGLVEKVRRIKVEFTEKDVEEFLSGRLNMRLVYKQLVSLRKMGPLRKILQMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + ++ ++K+ + I++SM ELD + + +A GAGV
Sbjct: 353 GLSLKIPLEIEAGKAEEKIKKWLAIINSMTYEELDKPEIIDRRRTRR-----IAYGAGVK 407
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFK 169
++V++L+ QY + K++ K L K
Sbjct: 408 TEDVRELLKQYEMMKKLSKQLRKRKDLLK 436
>gi|448544114|ref|ZP_21625427.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|448551126|ref|ZP_21629268.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|448558381|ref|ZP_21633055.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
gi|445705618|gb|ELZ57511.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|445710682|gb|ELZ62480.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|445713269|gb|ELZ65048.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
Length = 465
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V +E + +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMKGNFTLKDMQKQMEAMDKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + EL+N ++ G R+
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEAELEN-------PRKVGASRVR 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R+AQG+G E+ +++L+ Q+ +K+
Sbjct: 401 RIAQGSGQDEETIQELLEQHRMMEQTIKQ 429
>gi|325957954|ref|YP_004289420.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
gi|325329386|gb|ADZ08448.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
Length = 447
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 46 IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTI 105
++ + G+FTL+DMY QF+ + KMGP Q+M MIPG L K + Q + +L + +
Sbjct: 320 VDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMIPGAGGK-LPKNASQVTEEKLSKYKIL 378
Query: 106 MDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVK-----K 160
MDSM D EL++ + K R+ R+A+G+G+ ++VK+L+ Y +K K
Sbjct: 379 MDSMTDQELEHPEVIK-----QSRVKRIARGSGMKNEDVKELLKYYNVTKKAMKGFGKRK 433
Query: 161 MGGIKG 166
MGG G
Sbjct: 434 MGGPLG 439
>gi|288922435|ref|ZP_06416623.1| signal recognition particle protein [Frankia sp. EUN1f]
gi|288346238|gb|EFC80579.1| signal recognition particle protein [Frankia sp. EUN1f]
Length = 526
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ LI++ + +++ E + K+ +FTL D EQ + KMGP ++GM+
Sbjct: 296 ILGMGDVLTLIEQAEKAFEVEQAEAMALKMATAEFTLEDFLEQMLTVRKMGPIGNLLGML 355
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG Q D L++ +++ L R++ I+ SM E RD L Q R RVA+G+
Sbjct: 356 PGMGQIKDQLAQVDDRD----LDRVVAIIRSMTPAE--RRDPKIL---QASRKARVARGS 406
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
GVT EV L+ ++ + ++K+M G GL G
Sbjct: 407 GVTVTEVNQLLDRFGEARKMMKQMAGGSGLIPG 439
>gi|126465672|ref|YP_001040781.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
gi|171769996|sp|A3DML3.1|SRP54_STAMF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|126014495|gb|ABN69873.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
Length = 441
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
I +GD+EGLI+KV +K++ E+ +E+ G+ +R +Y+Q ++ KMGP +I+ MIP
Sbjct: 290 ILGIGDLEGLIEKVRRIKVEFTEKDVEEFLSGRLNMRLVYKQLVSLRKMGPLRKILQMIP 349
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G S + ++ ++K+ + I++SM ELD + + +A GAGV
Sbjct: 350 GLSLKIPLEIEAGKAEEKIKKWLAIINSMTYEELDKPEIIDRRRIRR-----IAYGAGVK 404
Query: 141 EKEVKDLISQY 151
++V++L+ QY
Sbjct: 405 PEDVRELLKQY 415
>gi|262303769|gb|ACY44477.1| signal recognition particle [Artemia salina]
Length = 101
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + +GDI GLIDKVNELKLDDNEEL+EK+KHG+FTLRDMYE
Sbjct: 56 PFIRKLLGLGDIAGLIDKVNELKLDDNEELVEKLKHGKFTLRDMYE 101
>gi|156960070|gb|ABU98503.1| signal recognition particle 54 kDa subunit [Xenia sp. OC108]
Length = 41
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 28 EGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMK 68
EGLIDKVNELKL+DNEELI K+K GQFTLRDMYEQFQNIMK
Sbjct: 1 EGLIDKVNELKLEDNEELIGKLKQGQFTLRDMYEQFQNIMK 41
>gi|23014875|ref|ZP_00054671.1| COG0541: Signal recognition particle GTPase [Magnetospirillum
magnetotacticum MS-1]
Length = 454
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ GL++K E L ++ E L ++++ G+F L DM +QF + KMG I+GM+
Sbjct: 293 ILGMGDVVGLVEKAMETLDQEEAERLAKRMEKGKFDLDDMRKQFAQVRKMGDLKGILGML 352
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG + L + M + R I+ SM E N D K K+ R+A GA
Sbjct: 353 PGIGKMAGALKDANIDNKM--VARQEAIITSMTKAERKNPDLIKASRKK-----RIAAGA 405
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
GV ++V L+ QY + A ++KK+G G KGL + G
Sbjct: 406 GVEVQDVNKLLKQYQQMADMMKKVGKLGQKGLMRHG 441
>gi|224138482|ref|XP_002322825.1| predicted protein [Populus trichocarpa]
gi|222867455|gb|EEF04586.1| predicted protein [Populus trichocarpa]
Length = 576
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI F D +Q + + KMG ++++GMI
Sbjct: 381 ILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSANFDFNDFLKQTRAVAKMGSMTRVIGMI 440
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ G +E+ LK + +++ M E R+ +L ++ R RVAQ +G
Sbjct: 441 PGMAK--VTPGQVREAEKNLKIMEAMIEVMTPEE---REKPELLAESPERRKRVAQASGK 495
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQ 188
TE++V L++Q + +M + G+ +GG I N +K Q+
Sbjct: 496 TEQQVSQLVAQLFQMRV---RMKNLMGVMEGGSIPSLSNLEDALKTKQK 541
>gi|452965666|gb|EME70686.1| Signal recognition particle GTPase [Magnetospirillum sp. SO-1]
Length = 454
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ GL++K E L ++ E L ++++ G+F L DM +QF + KMG I+GM+
Sbjct: 293 ILGMGDVVGLVEKAMETLDQEEAERLAKRMEKGKFDLDDMRKQFAQVRKMGDLKGILGML 352
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG + L + M + R I+ SM E N D K K+ R+A GA
Sbjct: 353 PGIGKMAGALKDANIDNKM--VARQEAIITSMTKAERRNPDLIKASRKK-----RIAAGA 405
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
GV ++V L+ QY + A ++KK+G G KGL + G
Sbjct: 406 GVEVQDVNKLLKQYQQMADMMKKVGKLGQKGLMRHG 441
>gi|83313161|ref|YP_423425.1| Signal recognition particle GTPase [Magnetospirillum magneticum
AMB-1]
gi|82948002|dbj|BAE52866.1| Signal recognition particle GTPase [Magnetospirillum magneticum
AMB-1]
Length = 454
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ GL++K E L ++ E L ++++ G+F L DM +QF + KMG I+GM+
Sbjct: 293 ILGMGDVVGLVEKAMETLDQEEAERLAKRMEKGKFDLDDMRKQFAQVRKMGDLKGILGML 352
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG + L + M + R I+ SM E N D K K+ R+A GA
Sbjct: 353 PGIGKMAGALKDANIDNKM--VARQEAIITSMTKAERRNPDLIKASRKK-----RIAAGA 405
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
GV ++V L+ QY + A ++KK+G G KGL + G
Sbjct: 406 GVEVQDVNKLLKQYQQMADMMKKVGKLGQKGLMRHG 441
>gi|406921336|gb|EKD59225.1| hypothetical protein ACD_55C00104G0001, partial [uncultured
bacterium]
Length = 254
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 17 LYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGDI L++K + E L +K+K QF L D Q Q I KMG I
Sbjct: 92 LVSRILGMGDILTLVEKAQATFDSQEAERLQQKLKKSQFDLEDFRNQLQQIKKMGSIESI 151
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR---DGAKLFSKQTGRITR 132
+GMIPG + Q S LKR+ I+ SM E N +G+ R R
Sbjct: 152 LGMIPGVGKAMKQLQGAQPSERELKRIEAIIGSMTPAERANHAIINGS--------RRLR 203
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKG 170
+A+G+G T +EV L+ ++T+ ++K++ G KGL +G
Sbjct: 204 IAKGSGTTVQEVNQLLKRFTEAQKMMKQLQKLGPKGLMRG 243
>gi|325294335|ref|YP_004280849.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064783|gb|ADY72790.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 448
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 14/145 (9%)
Query: 16 PLY-----CGICCMGDIEGLIDKVNELKLDDNEELI--EKIKHGQFTLRDMYEQFQNIMK 68
P Y I MGDI L++K E+ +D+ E L EK+ G+FTL D +Q + I +
Sbjct: 282 PFYPDRVASRILGMGDIVSLVEKAQEV-IDEKEALSMQEKLLSGEFTLEDFRQQLRMIQR 340
Query: 69 MGPFSQIMGMIPGF-SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQT 127
+GP QI+ MIPG SQ L + + +LKR+ I++SM E R+ A +
Sbjct: 341 LGPLQQIIRMIPGLSSQKMLKQLEKAIDDKKLKRIEAIINSMTPEE--RRNHAII---NA 395
Query: 128 GRITRVAQGAGVTEKEVKDLISQYT 152
R R+A+G+G + KEV LI Q+
Sbjct: 396 SRKRRIAKGSGTSVKEVDALIKQFV 420
>gi|289192492|ref|YP_003458433.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
gi|288938942|gb|ADC69697.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
Length = 451
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E L++K ++ + EE I+ I G+FTL ++ Q + I MG +I+ MIP
Sbjct: 293 LLGMGDLESLLEKAEDMVDEKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF + K + A++K+ I+ SM E R+ K+ + RI R+A+G+G T
Sbjct: 353 GFG-GAMPKELSHLTEAKIKKYKVIISSMTKEE---RENPKII--KASRIRRIARGSGTT 406
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI 173
E +V++++ Y + K+ K L GG +
Sbjct: 407 ENDVREVLKYYETTKNAIDKLRKGKMLRIGGPL 439
>gi|15668272|ref|NP_247065.1| signal recognition particle protein Srp54 [Methanocaldococcus
jannaschii DSM 2661]
gi|2500886|sp|Q57565.1|SRP54_METJA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|1590878|gb|AAB98081.1| signal recognition particle, subunit SRP54 [Methanocaldococcus
jannaschii DSM 2661]
Length = 451
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E L++K ++ + EE I+ I G+FTL ++ Q + I MG +I+ MIP
Sbjct: 293 LLGMGDLESLLEKAEDMVDEKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF + K + A++K+ I+ SM E R+ K+ + RI R+A+G+G T
Sbjct: 353 GFG-GAMPKELSHLTEAKIKKYKVIISSMTKEE---RENPKII--KASRIRRIARGSGTT 406
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDI 173
E +V++++ Y + K+ K L GG +
Sbjct: 407 ENDVREVLRYYETTKNAIDKLRKGKMLRIGGPL 439
>gi|349699228|ref|ZP_08900857.1| signal recognition particle protein [Gluconacetobacter europaeus
LMG 18494]
Length = 464
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I +GDI GL++K + L +++E+L K+ G+F L D Q + I KMG S I+GM+
Sbjct: 295 ILGLGDIAGLVEKAADTLDHEESEKLALKMMQGKFDLDDYAAQIRQINKMGSISGILGML 354
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + G ++ + LKR I+ SM E R + + R R+A G+G
Sbjct: 355 PGMGKLKDALGDKELDTSVLKRHQAIISSMTRKE---RRTPSII--KASRKKRIAAGSGT 409
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
T +E+ L+ QY A+++K+ G+KGL + G
Sbjct: 410 TVQEINRLLKQYDAMASMMKRFSKLGVKGLMRQG 443
>gi|347760145|ref|YP_004867706.1| signal recognition particle protein [Gluconacetobacter xylinus NBRC
3288]
gi|347579115|dbj|BAK83336.1| signal recognition particle protein [Gluconacetobacter xylinus NBRC
3288]
Length = 464
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I +GDI GL++K + L +++E+L K+ G+F L D Q + I KMG S I+GM+
Sbjct: 295 ILGLGDIAGLVEKAADTLDHEESEKLALKMMQGKFDLDDYAAQIRQINKMGSISGILGML 354
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + G ++ + LKR I+ SM E R + + R R+A G+G
Sbjct: 355 PGMGKLKDALGDKELDTSVLKRHQAIISSMTRKE---RRTPSII--KASRKKRIAAGSGT 409
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
T +E+ L+ QY A+++K+ G+KGL + G
Sbjct: 410 TVQEINRLLKQYDAMASMMKRFSKLGVKGLMRQG 443
>gi|330993998|ref|ZP_08317928.1| Signal recognition particle protein [Gluconacetobacter sp. SXCC-1]
gi|329758944|gb|EGG75458.1| Signal recognition particle protein [Gluconacetobacter sp. SXCC-1]
Length = 453
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I +GDI GL++K + L +++E+L K+ G+F L D Q + I KMG S I+GM+
Sbjct: 284 ILGLGDIAGLVEKAADTLDHEESEKLALKMMQGKFDLDDYAAQIRQINKMGSISGILGML 343
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + G ++ + LKR I+ SM E R + + R R+A G+G
Sbjct: 344 PGMGKLKDALGDKELDTSVLKRHQAIISSMTRKE---RRTPSII--KASRKKRIAAGSGT 398
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
T +E+ L+ QY A+++K+ G+KGL + G
Sbjct: 399 TVQEINRLLKQYDAMASMMKRFSKLGVKGLMRQG 432
>gi|197123778|ref|YP_002135729.1| signal recognition particle protein [Anaeromyxobacter sp. K]
gi|196173627|gb|ACG74600.1| signal recognition particle protein [Anaeromyxobacter sp. K]
Length = 550
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 17 LYCGICCMGDIEGLI-DKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I GDI GL+ D + + E +KI G FTL D Q + + KMGP ++
Sbjct: 298 LASRILGFGDIVGLVKDFEQHVDEETAEAEAQKILSGDFTLEDFVNQIRMVRKMGPLGEL 357
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M P F + L + + + A L R++ ++DSM E D S R+ R+A+
Sbjct: 358 MEKFPMFGE--LPENFQFDDSA-LTRIVAMVDSMTQAERLRPD-----SITDQRVKRIAK 409
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
GAG TEK+V+DL+ QY V+K++G GL + + Q+M+L + K M+
Sbjct: 410 GAGRTEKDVRDLLKQYNAMRGVMKQVGSAPGL-----LARLPGVKQLMQLRKMQGKGME 463
>gi|262303811|gb|ACY44498.1| signal recognition particle [Ischnura verticalis]
gi|262303819|gb|ACY44502.1| signal recognition particle [Plathemis lydia]
Length = 101
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 40/46 (86%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLID+V+EL+LD+NEEL+EKI+HGQFTLRDMYE
Sbjct: 56 PFVSKLLGMGDIEGLIDRVSELRLDENEELMEKIRHGQFTLRDMYE 101
>gi|220918542|ref|YP_002493846.1| signal recognition particle protein [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956396|gb|ACL66780.1| signal recognition particle protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 550
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 17 LYCGICCMGDIEGLI-DKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I GDI GL+ D + + E +KI G FTL D Q + + KMGP ++
Sbjct: 298 LASRILGFGDIVGLVKDFEQHVDEETAEAEAQKILSGDFTLEDFVNQIRMVRKMGPLGEL 357
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M P F + L + + + A L R++ ++DSM E D S R+ R+A+
Sbjct: 358 MEKFPMFGE--LPENFQFDDSA-LTRIVAMVDSMTQAERLRPD-----SITDQRVKRIAK 409
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
GAG TEK+V+DL+ QY V+K++G GL + + Q+M+L + K M+
Sbjct: 410 GAGRTEKDVRDLLKQYNAMRGVMKQVGSAPGL-----LARLPGVKQLMQLRKMQGKGME 463
>gi|349685659|ref|ZP_08896801.1| signal recognition particle protein [Gluconacetobacter oboediens
174Bp2]
Length = 464
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I +GDI GL++K + L +++E+L K+ G+F L D Q + I KMG S I+GM+
Sbjct: 295 ILGLGDIAGLVEKAADTLDHEESEKLALKMMQGKFDLDDYAAQIRQINKMGSISGILGML 354
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + G ++ + LKR I+ SM E R + + R R+A G+G
Sbjct: 355 PGMGKLKDALGDKELDTSVLKRHQAIISSMTRKE---RRTPSII--KASRKKRIAAGSGT 409
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
T +E+ L+ QY A+++K+ G+KGL + G
Sbjct: 410 TVQEINRLLKQYDAMASMMKRFSKLGVKGLMRQG 443
>gi|326404546|ref|YP_004284628.1| signal recognition particle protein [Acidiphilium multivorum
AIU301]
gi|325051408|dbj|BAJ81746.1| signal recognition particle protein [Acidiphilium multivorum
AIU301]
Length = 462
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L++K E + E+L +K+ G+F L D EQ + I KMG S IMGM+
Sbjct: 300 ILGMGDIVSLVEKAAENVDQQKAEQLAKKMARGKFDLEDYAEQLKQITKMGSLSGIMGML 359
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + LKR I+ SM E N D K K+ RVA G+G
Sbjct: 360 PGVGKIKQQLAEADLDTSILKRQAAIISSMTKAERANPDIMKASRKK-----RVAAGSGT 414
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
+ +EV L+ Q+ + ++K+ G KGL +GG
Sbjct: 415 SVQEVNRLLKQFEQMKDMMKRAQKLGQKGLARGG 448
>gi|256810320|ref|YP_003127689.1| signal recognition particle protein Srp54 [Methanocaldococcus
fervens AG86]
gi|256793520|gb|ACV24189.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus fervens AG86]
Length = 451
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K ++ + EE I+ I G+FTL ++ Q + I MG +I+ MIP
Sbjct: 293 LLGMGDLDSLLEKAEDMVDEKTEESIDAIMKGKFTLNELLTQLEAIENMGSMKKILSMIP 352
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF + K + A++K+ I+ SM E R+ K+ + RI R+A+G+G T
Sbjct: 353 GFG-GAMPKELSNLTEAKIKKYKVIISSMTKEE---RENPKII--KASRIRRIARGSGTT 406
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQ 179
E EV++++ Y + K+ K L GG + + + Q
Sbjct: 407 ENEVREVLKYYETTKNAIDKLRKGKMLRIGGPLGQILRQ 445
>gi|385806157|ref|YP_005842555.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
gi|383796020|gb|AFH43103.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
Length = 453
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 87/151 (57%), Gaps = 5/151 (3%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDIE ++++V + + ++ EE+ + + G ++ +Y+Q + I MGP +I+ MI
Sbjct: 294 ILGMGDIEAILERVYSTMSQNELEEMADSLMSGNLNMKLIYKQIKQIRSMGPIGKILRMI 353
Query: 80 PGFSQDFLS-KGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
PG S +G+ + S ++ + I++SM E++ + L ++ RI R+A GAG
Sbjct: 354 PGLSMSLPEDEGALKVSEKKMDMWLNIINSMTYEEMEKPE---LLEREKSRIRRIAIGAG 410
Query: 139 VTEKEVKDLISQYTKFAAVVKKMGGIKGLFK 169
V +++V++L++ Y ++K++ K L K
Sbjct: 411 VAQEDVRELLNYYNYIKKLLKQLKRRKSLLK 441
>gi|148261145|ref|YP_001235272.1| signal recognition particle protein [Acidiphilium cryptum JF-5]
gi|146402826|gb|ABQ31353.1| signal recognition particle subunit FFH/SRP54 (srp54) [Acidiphilium
cryptum JF-5]
Length = 457
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L++K E + E+L +K+ G+F L D EQ + I KMG S IMGM+
Sbjct: 295 ILGMGDIVSLVEKAAENVDQQKAEQLAKKMARGKFDLEDYAEQLKQITKMGSLSGIMGML 354
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + LKR I+ SM E N D K K+ RVA G+G
Sbjct: 355 PGVGKIKQQLAEADLDTSILKRQAAIISSMTKAERANPDIMKASRKK-----RVAAGSGT 409
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
+ +EV L+ Q+ + ++K+ G KGL +GG
Sbjct: 410 SVQEVNRLLKQFEQMKDMMKRAQKLGQKGLARGG 443
>gi|292654301|ref|YP_003534198.1| signal recognition particle protein [Haloferax volcanii DS2]
gi|433434645|ref|ZP_20408024.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|448293845|ref|ZP_21483948.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|448573620|ref|ZP_21641103.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|448597768|ref|ZP_21654693.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
gi|28380161|sp|Q977V2.1|SRP54_HALVD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54; AltName: Full=Hv54h
gi|15277690|gb|AAK93963.1|AF395887_1 signal recognition particle 54 kDa subunit-like protein [Haloferax
volcanii]
gi|291371443|gb|ADE03670.1| signal recognition particle 54K protein [Haloferax volcanii DS2]
gi|432192665|gb|ELK49503.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|445569766|gb|ELY24337.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|445718526|gb|ELZ70216.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|445739229|gb|ELZ90738.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
Length = 465
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V +E + +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMKGNFTLKDMQKQMEAMDKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + EL+N ++ G R+
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELEN-------PRKVGASRVR 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R+AQG+G E+ +++L+ Q+ +K+
Sbjct: 401 RIAQGSGQDEETIQELLEQHRMMEQTIKQ 429
>gi|298675575|ref|YP_003727325.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanohalobium evestigatum Z-7303]
gi|298288563|gb|ADI74529.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanohalobium evestigatum Z-7303]
Length = 440
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS 83
MGDI LI+K E ++ + +E + G+FTL+DMY+Q + + KMGP Q+M M+PG
Sbjct: 291 MGDIRSLIEKAEESLSEEELD-VESMMQGRFTLKDMYKQLEAVNKMGPLKQVMQMMPGGM 349
Query: 84 QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKE 143
+S+ Q + +L R IMDSM +D D KL + RI R+++G+G +
Sbjct: 350 GQNISEEQFQVTSEKLSRYRIIMDSMT---VDEMDDPKLIG--SSRIKRISRGSGSKPDD 404
Query: 144 VKDLISQYTKFAAVVKKMGG 163
V++L+ + +K G
Sbjct: 405 VRELLKYHKTMQNAMKNFRG 424
>gi|39995748|ref|NP_951699.1| signal recognition particle protein [Geobacter sulfurreducens PCA]
gi|39982512|gb|AAR33972.1| signal recognition particle protein [Geobacter sulfurreducens PCA]
Length = 452
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 17 LYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGDI L++K + E L +K+K QF L D Q Q I KMG I
Sbjct: 290 LVSRILGMGDILTLVEKAQATFDSQEAERLQQKLKKSQFDLEDFRNQLQQIKKMGSIESI 349
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR---DGAKLFSKQTGRITR 132
+GMIPG + Q S LKR+ I+ SM E N +G+ R R
Sbjct: 350 LGMIPGVGKAMKQLQGAQPSERELKRIEAIIGSMTPAERANHAIINGS--------RRLR 401
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKG 170
+A+G+G T +EV L+ ++T+ ++K++ G KGL +G
Sbjct: 402 IAKGSGTTVQEVNQLLKRFTEAQKMMKQLQKLGPKGLMRG 441
>gi|330802872|ref|XP_003289436.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
gi|325080478|gb|EGC34032.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
Length = 516
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 85/134 (63%), Gaps = 8/134 (5%)
Query: 25 GDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQ 84
GDI+G+++K+ E+ +D+ L E I G+FTLR M +QFQ I+++GP + + MIPG SQ
Sbjct: 298 GDIKGMLEKIKEVIPEDSSSLKE-IAQGKFTLRSMQQQFQQILQLGPIDKFVQMIPGMSQ 356
Query: 85 DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEV 144
+G+E +LK + I+DS++D EL DG K +++ RI +AQGAG KEV
Sbjct: 357 MPQLQGNEGN--LKLKAYINILDSLSDKEL---DGKKPITQK--RILAIAQGAGRHPKEV 409
Query: 145 KDLISQYTKFAAVV 158
+L+ Q+ F ++
Sbjct: 410 LELLEQHKMFEKLI 423
>gi|338980293|ref|ZP_08631582.1| Signal recognition particle protein [Acidiphilium sp. PM]
gi|338208802|gb|EGO96632.1| Signal recognition particle protein [Acidiphilium sp. PM]
Length = 462
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L++K E + E+L K+ G+F L D EQ + I KMG S IMGM+
Sbjct: 300 ILGMGDIVSLVEKAAENVDQQKAEQLARKMARGKFDLEDYAEQLKQITKMGSLSGIMGML 359
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + LKR I+ SM E N D K K+ RVA G+G
Sbjct: 360 PGVGKIKQQLAEADLDTSILKRQAAIISSMTKAERANPDIMKASRKK-----RVAAGSGT 414
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
+ +EV L+ Q+ + ++K+ G KGL +GG
Sbjct: 415 SVQEVNRLLKQFEQMKDMMKRAQKLGQKGLARGG 448
>gi|409911192|ref|YP_006889657.1| signal recognition particle protein [Geobacter sulfurreducens
KN400]
gi|298504758|gb|ADI83481.1| signal recognition particle protein [Geobacter sulfurreducens
KN400]
Length = 452
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 17 LYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGDI L++K + E L +K+K QF L D Q Q I KMG I
Sbjct: 290 LVSRILGMGDILTLVEKAQATFDSQEAERLQQKLKKSQFDLEDFRNQLQQIKKMGSIESI 349
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR---DGAKLFSKQTGRITR 132
+GMIPG + Q S LKR+ I+ SM E N +G+ R R
Sbjct: 350 LGMIPGVGKAMKQLQGAQPSERELKRIEAIIGSMTPAERANHAIINGS--------RRLR 401
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKG 170
+A+G+G T +EV L+ ++T+ ++K++ G KGL +G
Sbjct: 402 IAKGSGTTVQEVNQLLKRFTEAQKMMKQLQKLGPKGLMRG 441
>gi|428773330|ref|YP_007165118.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
gi|428687609|gb|AFZ47469.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Cyanobacterium stanieri PCC 7202]
Length = 483
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L++K EL + D E++ K+ +F D +Q + + MG F+ +M +I
Sbjct: 293 ILNMGDIVSLVEKAQEELDIGDVEKMQRKMMEAKFDFNDFLKQMRLLKNMGSFAGVMKLI 352
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ + G+ ++ ++LK +I++SM E R+ +L +K R R+AQG+G
Sbjct: 353 PGMNK--IGAGALEKGESQLKITESIINSMTKQE---RENPELLAKSPSRRRRIAQGSGH 407
Query: 140 TEKEVKDLISQYTKFAAVVKKM 161
EKEV LIS +T+ +++++M
Sbjct: 408 QEKEVSRLISDFTRMRSMMQQM 429
>gi|448312267|ref|ZP_21502014.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
gi|445601867|gb|ELY55848.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
Length = 465
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + G FTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTQVEEDDWDPEDMLQGSFTLHDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQDRMRKFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEEDVRELLQQYKMMEKTIKQFQGM 433
>gi|295111654|emb|CBL28404.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Synergistetes bacterium SGP1]
Length = 447
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
I MGDI+GL++KV D +++ +K QFTL + QFQ I KMGP ++M MIP
Sbjct: 292 IMGMGDIQGLVEKVQAADAGDAQKIANSLKGKQFTLETLLLQFQQIEKMGPLGKVMEMIP 351
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GFS+ ++ A ++R I+ SM E R ++ + R R+A G+G +
Sbjct: 352 GFSR-LKGINVDEADNAAIRRSKAIIQSMTPAE---RRNPRII--KGSRRRRIALGSGTS 405
Query: 141 EKEVKDLISQY 151
+ V L++QY
Sbjct: 406 VQMVNQLLAQY 416
>gi|158430970|pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
gi|158430971|pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
Length = 432
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E L++K ++ + EE I+ I G+FTL ++ Q + I MG +I+ MIP
Sbjct: 292 LLGMGDLESLLEKAEDMVDEKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIP 351
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF + K + A++K+ I+ SM E R+ K+ + RI R+A+G+G T
Sbjct: 352 GFG-GAMPKELSHLTEAKIKKYKVIISSMTKEE---RENPKII--KASRIRRIARGSGTT 405
Query: 141 EKEVKDLISQYTKFAAVVKKM 161
E +V++++ Y + K+
Sbjct: 406 ENDVREVLRYYETTKNAIDKL 426
>gi|448622352|ref|ZP_21669046.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
gi|445754434|gb|EMA05839.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
Length = 464
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V +E + +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMKGNFTLKDMQKQMEAMDKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + EL+N ++ G R+
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEEELEN-------PRKVGASRVK 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R+AQG+G E+ +++L+ Q+ +K+
Sbjct: 401 RIAQGSGQDEETIQELLEQHRMMEQTIKQ 429
>gi|262303791|gb|ACY44488.1| signal recognition particle [Eumesocampa frigilis]
Length = 101
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 38/46 (82%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGLI KVNELKLD+N ELI+KIKHGQFTLRDMYE
Sbjct: 56 PFISKLLGMGDIEGLIGKVNELKLDENTELIDKIKHGQFTLRDMYE 101
>gi|430812103|emb|CCJ30439.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 314
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 10/117 (8%)
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPG +Q + +G E+ES + KRL+ IMDSM + ELD+ DG K+F+ + RI R+A
Sbjct: 156 ISMIPGTAQ--MMEGIEEESSRKFKRLIYIMDSMTEKELDS-DG-KIFTNEPSRIIRIAM 211
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKM 192
G+G + EVK L+SQ+ A + KK+G KGG +N+N ++K QQ+A +
Sbjct: 212 GSGTSVSEVKGLLSQHHIMAGIAKKVGE-----KGGLKNQNMN-PNLLKNPQQIASI 262
>gi|323714481|pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
Recognition Particle
Length = 454
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E L++K ++ + EE I+ I G+FTL ++ Q + I MG +I+ MIP
Sbjct: 292 LLGMGDLESLLEKAEDMVDEKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIP 351
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GF + K + A++K+ I+ SM E R+ K+ + RI R+A+G+G T
Sbjct: 352 GFG-GAMPKELSHLTEAKIKKYKVIISSMTKEE---RENPKII--KASRIRRIARGSGTT 405
Query: 141 EKEVKDLISQYTKFAAVVKKM 161
E +V++++ Y + K+
Sbjct: 406 ENDVREVLRYYETTKNAIDKL 426
>gi|336179501|ref|YP_004584876.1| signal recognition particle protein [Frankia symbiont of Datisca
glomerata]
gi|334860481|gb|AEH10955.1| signal recognition particle protein [Frankia symbiont of Datisca
glomerata]
Length = 530
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 12/144 (8%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ LI++ + + + E+L K+ +FTL D EQ + KMGP + ++GM+
Sbjct: 296 ILGMGDVLTLIEQAEKAFEAEQAEQLAAKMAASEFTLSDFLEQMLTVRKMGPIANLLGML 355
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG Q D L++ +++ + R++ I+ SM E RD ++ Q R RVA+G+
Sbjct: 356 PGMGQMKDQLAQIDDRD----VDRVVAIIRSMTPAE---RDDPRIL--QASRKARVARGS 406
Query: 138 GVTEKEVKDLISQYTKFAAVVKKM 161
GVT EV L+ ++ + V+K+M
Sbjct: 407 GVTVTEVNQLLDRFEEARKVMKQM 430
>gi|158312999|ref|YP_001505507.1| signal recognition particle protein [Frankia sp. EAN1pec]
gi|158108404|gb|ABW10601.1| signal recognition particle protein [Frankia sp. EAN1pec]
Length = 521
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ LI++ + +++ E + K+ + +FTL D EQ + KMGP ++GM+
Sbjct: 296 ILGMGDVLTLIEQAEKAFEVEQAEAMAVKMANSEFTLEDFLEQMLTVRKMGPIGNLLGML 355
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG Q D L++ +++ L R++ I+ SM E RD L Q R RVA+G+
Sbjct: 356 PGMGQIKDQLAQVDDRD----LDRVVAIIRSMTPAE--RRDPKIL---QASRKARVARGS 406
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
GVT EV L+ ++ + ++++M G GL G
Sbjct: 407 GVTVTEVNQLLDRFGEARKMMRQMAGGAGLPAG 439
>gi|390557792|ref|ZP_10243195.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
gi|390174633|emb|CCF82484.1| signal recognition particle-like (SRP) GTPase [Nitrolancetus
hollandicus Lb]
Length = 507
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 17/193 (8%)
Query: 17 LYCGICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGD+ LI++ E+ D++++L EK+ G F L D Q Q I KMGP +Q+
Sbjct: 289 LASRILGMGDVLTLIERAQTEITEDESKKLEEKVLTGSFNLEDFLRQLQQIKKMGPLTQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPG Q L + Q S K + I+ SM E + K R R+A
Sbjct: 349 LEMIPGIGQ-ALRQQDVQVSDDEYKHIEAIIYSMTPEERRRPEIIK-----PSRRRRIAM 402
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMG--------GIKGLFKGGDITKNVNQTQMMKLNQ 187
G+G ++ EV L++Q+ + ++ +G GI+GL G + ++ + + + Q
Sbjct: 403 GSGTSQAEVNQLLTQFKQMQKMMADLGQAGAGKKKGIRGLLSGKNPFAGLDDSTLEAMMQ 462
Query: 188 QMAKM--MDPRVL 198
Q + + +DP L
Sbjct: 463 QGSGIPGLDPSRL 475
>gi|448560514|ref|ZP_21633962.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|448582785|ref|ZP_21646289.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
gi|445722164|gb|ELZ73827.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|445732433|gb|ELZ84016.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
Length = 463
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V +E + +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMKGNFTLKDMQKQMEAMNKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ +MDSM + EL+N ++ G R+
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTKDRMRAFEVVMDSMTEEELEN-------PRKVGASRVK 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R+AQG+G E+ +++L+ Q+ +K+
Sbjct: 401 RIAQGSGQDEETIQELLEQHRMMEQTIKQ 429
>gi|389845623|ref|YP_006347862.1| signal recognition particle protein [Haloferax mediterranei ATCC
33500]
gi|448616760|ref|ZP_21665470.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
gi|388242929|gb|AFK17875.1| signal recognition particle 54K protein [Haloferax mediterranei
ATCC 33500]
gi|445751415|gb|EMA02852.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
Length = 464
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V +E + +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMQGSFTLKDMQKQMEAMNKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + EL+N ++ G R+
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELEN-------PRKVGASRVK 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKK 160
R++QG+G E+ +++L+ Q+ +K+
Sbjct: 401 RISQGSGQDEETIQELLEQHRMMEQTIKQ 429
>gi|160915188|ref|ZP_02077401.1| hypothetical protein EUBDOL_01196 [Eubacterium dolichum DSM 3991]
gi|158432987|gb|EDP11276.1| signal recognition particle protein [Eubacterium dolichum DSM 3991]
Length = 470
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L+++ E + ++ + ++ G FTL DM QFQ + KMG +M MI
Sbjct: 295 ILGMGDIMSLVEQAQEKMDIEAANKTANRMMSGTFTLNDMLMQFQQMKKMGSLGNLMKMI 354
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG +Q F + E ++ ++K+ I+ SM E +N D + R RVA G+G
Sbjct: 355 PGMNQ-FAGQIDEAKADDKMKKNEAIILSMTPEERENPD-----IMRASRKNRVANGSGT 408
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIK--GLFKGGDITKNVNQTQMMKLNQQM 189
T +V L++ Y K ++K+MG + G+ G+++K QM +N+ M
Sbjct: 409 TVADVNRLLNDYNKMKTMMKQMGNLSKGGMPAMGNMSKLGAMKQMRNMNKMM 460
>gi|448589278|ref|ZP_21649437.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
gi|445735706|gb|ELZ87254.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
Length = 461
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V E +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMAETTAEDEDWDPEEMMKGSFTLKDMQKQMEAMNKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
MIPG +D L + + R++ IMDSM D EL+N ++ R+ R+
Sbjct: 348 DMIPGLGGGLKDQLPDDAMDVTKDRMRSFEIIMDSMTDEELEN---PRIIG--ASRVQRI 402
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
AQG+G E+ +++L+ Q+ +K+ G+
Sbjct: 403 AQGSGRDEETIQELLEQHRMMERTIKQFQGM 433
>gi|448363999|ref|ZP_21552593.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
gi|445644887|gb|ELY97894.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
Length = 461
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKV----NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V ++ ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMDQTEIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E +V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTNEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|435850492|ref|YP_007312078.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
gi|433661122|gb|AGB48548.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
Length = 439
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP-GF 82
MGDI+GLI+K E L + E +E + G+FTL+DMY+Q + + KMGP QIM M+P G
Sbjct: 291 MGDIQGLIEKAQE-NLKEEELDMEAMMRGRFTLKDMYKQLETLNKMGPMKQIMQMLPLGG 349
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ + + Q + +L + +MDSM + E+ N +L + RI R++ G+G
Sbjct: 350 MGVKVPEEAYQVTGEKLTKYRVVMDSMTEEEMLN---PRLIG--SARIKRISMGSGCGPD 404
Query: 143 EVKDLISQYTKFAAVVKKMGGIK 165
+V++L+ Y +K + G K
Sbjct: 405 DVRELLKYYKTMQNTMKGLRGGK 427
>gi|449451269|ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
gi|449482550|ref|XP_004156318.1| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Cucumis sativus]
Length = 572
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 92/169 (54%), Gaps = 9/169 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q + + +MG ++++GMI
Sbjct: 378 ILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMI 437
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + ++ +E+ LK + +++++M E R+ +L ++ R RVAQ +G
Sbjct: 438 PGMGK--VTPAQVREAEKSLKIMESMIEAMTPEE---REKPELLAESPARRKRVAQDSGK 492
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQ 188
TE++V L++Q + +M + G+ +GG I N + +K Q+
Sbjct: 493 TEQQVSQLVAQLFQMRV---RMKNLMGVMEGGSIPALNNLEEALKAEQK 538
>gi|448578870|ref|ZP_21644246.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
gi|445725453|gb|ELZ77077.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
Length = 461
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V E +D + E++ G FTL+DM +Q + + KMGP Q++
Sbjct: 288 LLGMGDLKQLSERVERAMAETTAEDEDWDPEEMMKGSFTLKDMQKQMEAMNKMGPLDQVL 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
MIPG +D L + + R++ IMDSM D EL+N ++ R+ R+
Sbjct: 348 DMIPGLGGGLKDQLPDDAMDVTKDRMRSFEIIMDSMTDEELEN---PRIIG--ASRVQRI 402
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
AQG+G E+ +++L+ Q+ +K+ G+
Sbjct: 403 AQGSGRDEETIQELLEQHRMMERTIKQFQGM 433
>gi|157813214|gb|ABV81352.1| putative signal recognition particle protein [Prodoxus
quinquepunctellus]
Length = 101
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGL+DKVNELKLDDN+EL+EK+KHGQFTLR MYE
Sbjct: 56 PFINKLLGMGDIEGLLDKVNELKLDDNDELLEKLKHGQFTLRAMYE 101
>gi|157813212|gb|ABV81351.1| putative signal recognition particle protein [Cydia pomonella]
Length = 101
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGL+DKVNELKLDDN+EL+EK+KHGQFTLR MYE
Sbjct: 56 PFINKLLGMGDIEGLLDKVNELKLDDNDELLEKLKHGQFTLRAMYE 101
>gi|222615533|gb|EEE51665.1| hypothetical protein OsJ_33001 [Oryza sativa Japonica Group]
Length = 550
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD+ ++K E ++ +D EL +KI +F D +Q QN+ KMG S+++GMI
Sbjct: 363 VLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMI 422
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ E E KRL + +N + R+ +L ++ R RVA+ +G
Sbjct: 423 PGMNKVTPAQIREAE-----KRLAFVESMINAMTAEEREKPELLAESRDRRIRVAEESGK 477
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGI 164
+E+EV L++Q + A ++K+ G+
Sbjct: 478 SEQEVSQLVAQLFQMRAQMQKLMGV 502
>gi|305663445|ref|YP_003859733.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
gi|304378014|gb|ADM27853.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
Length = 453
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEE--LIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
I +GD+ LIDK+ ++ + E L + I G+ +L D+Y Q Q + K+GP S+I+ +
Sbjct: 293 ILGLGDLPTLIDKLKSIERSSDLEKRLTKAIATGKISLVDLYLQIQTMRKLGPLSKILQL 352
Query: 79 IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
IPG S + + S ++ + + I++SM EL N + + K RI R+A G+G
Sbjct: 353 IPGLSLLPVDDKQLKISEEKMDKWLAIINSMTYEELRNPN---IIDK--SRINRIAIGSG 407
Query: 139 VTEKEVKDLISQYTKFAAVVKKMGGIKGLFK--GGDITK 175
T +VK+L+ Y ++K M GL + G D++K
Sbjct: 408 TTADDVKELLKYYELVNTMIKNMKRRYGLLRKLGIDLSK 446
>gi|315427553|dbj|BAJ49153.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
Length = 466
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 11/136 (8%)
Query: 19 CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ M DIE ++++V +L +E+ E I G+FTL DM EQ ++ K+GP +++
Sbjct: 316 ASLLGMPDIESIVERVKLAELTADEKQFEAILKGKFTLEDMVEQVNSLTKLGPLKKLLAK 375
Query: 79 IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR---DGAKLFSKQTGRITRVAQ 135
+P D +++ R+K+ I+ SM E ++ DG+ RI R+A
Sbjct: 376 LPFPGMDAFPDDQLEKAQDRIKKWNAIIKSMTAEEKNDPSILDGS--------RIRRIAY 427
Query: 136 GAGVTEKEVKDLISQY 151
GAGV E++V++L+ Y
Sbjct: 428 GAGVLERDVRELLRSY 443
>gi|352681831|ref|YP_004892355.1| signal recognition particle subunit SRP54 [Thermoproteus tenax Kra
1]
gi|350274630|emb|CCC81275.1| signal recognition particle, subunit SRP54 [Thermoproteus tenax Kra
1]
Length = 439
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 7/131 (5%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD+E L+++V + + E+++E ++ G+ L +Q ++K+GP S+IM ++P
Sbjct: 290 VLGMGDLESLVERVKAVL--EEEKILEDLESGRMDLLSFKKQLDALLKLGPLSKIMELLP 347
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
G +S+ + S LK+ I+ SM EL +D + L RI R+A GAGVT
Sbjct: 348 GTLASKISEEQIELSQKNLKKWRAILSSMTKEEL--KDPSIL---NASRIRRIAIGAGVT 402
Query: 141 EKEVKDLISQY 151
K+VKD++ Y
Sbjct: 403 PKDVKDMLRAY 413
>gi|296536512|ref|ZP_06898602.1| signal recognition particle protein [Roseomonas cervicalis ATCC
49957]
gi|296263168|gb|EFH09703.1| signal recognition particle protein [Roseomonas cervicalis ATCC
49957]
Length = 461
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L+++ E + + E+L K++ GQF L D Q + I KMG S I+GM+
Sbjct: 299 ILGMGDIVSLVERAAETIDKAEAEKLAAKMQKGQFDLEDYAAQLKQIGKMGSLSGILGML 358
Query: 80 PGFSQDFLSKGSEQESMAR--LKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG + L E ++ LKR I+ SM E N + K K+ R+A G+
Sbjct: 359 PGVGK--LKSQLEDANLDNTILKRQAAIIGSMTPKERRNPEILKASRKK-----RIAAGS 411
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
G T +EV L+ Q+ +A++K+M G KGL +GG
Sbjct: 412 GTTVQEVNRLLKQFDDMSAMMKRMNKLGQKGLMRGG 447
>gi|336476226|ref|YP_004615367.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanosalsum zhilinae DSM 4017]
gi|335929607|gb|AEH60148.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 439
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 83/141 (58%), Gaps = 7/141 (4%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP-GF 82
MGDI+ L++K E LD +E +E + G+FTL+DMY+Q + + KMGP QIM M+P G
Sbjct: 291 MGDIKTLLEKAEE-SLDKDELDMEAMMKGRFTLKDMYKQMEALNKMGPMKQIMQMLPLGG 349
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ + + Q + +L R IMDSM + E+ N +L + RI R+++G+G + +
Sbjct: 350 LGAKIPEDAYQVTGDKLTRYRIIMDSMTEEEMLN---PRLIG--SSRIKRISRGSGNSPE 404
Query: 143 EVKDLISQYTKFAAVVKKMGG 163
+V++L+ + +K M G
Sbjct: 405 DVRELLKYHKMMQNAMKGMRG 425
>gi|315425555|dbj|BAJ47216.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
gi|343484393|dbj|BAJ50047.1| signal recognition particle, subunit SRP54 [Candidatus
Caldiarchaeum subterraneum]
Length = 466
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 19 CGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
+ M DIE ++++V +L +E+ E I G+FTL DM EQ ++ K+GP +++
Sbjct: 316 ASLLGMPDIESIVERVKLAELTADEKQFEAILKGKFTLEDMVEQVNSLTKLGPLKKLLAK 375
Query: 79 IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNR---DGAKLFSKQTGRITRVAQ 135
+P D L +++ R+++ I+ SM E ++ DG+ RI R+A
Sbjct: 376 LPFPGIDALPDDQLEKAQDRIRKWNAIIKSMTAEEKNDPSILDGS--------RIRRIAY 427
Query: 136 GAGVTEKEVKDLISQY 151
GAGV E++V++L+ Y
Sbjct: 428 GAGVLERDVRELLRSY 443
>gi|397772073|ref|YP_006539619.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|448342497|ref|ZP_21531447.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
gi|397681166|gb|AFO55543.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|445625512|gb|ELY78869.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
Length = 464
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V E +++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEETDIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPG +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTDEEQVRELLQQYKMMERTMKQFQGM 433
>gi|238009706|gb|ACR35888.1| unknown [Zea mays]
gi|413916133|gb|AFW56065.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 351
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D +EL +KI +F D +Q Q I KMG FS+++GMI
Sbjct: 162 ILGMGDVLSFVEKAQEVMRQEDADELQKKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMI 221
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +E+ LK + ++++ M L+ R+ +L ++ R RVA+ +G
Sbjct: 222 PGMNK--VTPAQIREAEKNLKFMESMINVMT---LEERERPELLAESRERRKRVAKDSGK 276
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
TE++V L++Q + A ++KM G
Sbjct: 277 TEQQVSQLVAQLFQMRAKMQKMMG 300
>gi|148508291|gb|ABQ76075.1| signal recognition particle 54K protein [uncultured haloarchaeon]
Length = 465
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 24 MGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
MGD++ L ++V E + D++ E I G FTL+DM +Q + + +MGP Q+M MI
Sbjct: 291 MGDLKQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMI 350
Query: 80 PGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQG 136
PG +D L + + R++ IMDSM + EL++ S R+ R+A+G
Sbjct: 351 PGLGGGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELEDP-----RSVGASRVRRIARG 405
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMGGI 164
+G E+ V++L+ Q+ +K+ G+
Sbjct: 406 SGTDEETVRELLQQHKMMERTIKQFQGM 433
>gi|110669292|ref|YP_659103.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
gi|121687082|sp|Q18EV2.1|SRP54_HALWD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|109627039|emb|CAJ53515.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
Length = 466
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 24 MGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
MGD++ L ++V E + D++ E I G FTL+DM +Q + + +MGP Q+M MI
Sbjct: 291 MGDLKQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMI 350
Query: 80 PGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQG 136
PG +D L + + R++ IMDSM + EL++ S R+ R+A+G
Sbjct: 351 PGLGGGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELEDP-----RSVGASRVRRIARG 405
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMGGI 164
+G E+ V++L+ Q+ +K+ G+
Sbjct: 406 SGTDEETVRELLQQHKMMERTIKQFQGM 433
>gi|86159726|ref|YP_466511.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85776237|gb|ABC83074.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 550
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 17 LYCGICCMGDIEGLI-DKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I GDI GL+ D + + E +KI G FTL D Q + + KMGP ++
Sbjct: 298 LASRILGFGDIVGLVKDFEQHVDEETAEAEAQKILSGDFTLEDFVNQIRMVRKMGPLGEL 357
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M P F + L + + + A L R++ ++DSM E D S R+ R+A+
Sbjct: 358 MEKFPMFGE--LPENFQFDDSA-LTRIVAMVDSMTQAERLRPD-----SITEPRLKRIAK 409
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
G+G TEK+V+DL+ QY V+K++G GL + + Q+M+L + K M+
Sbjct: 410 GSGRTEKDVRDLLKQYNAMRGVMKQVGSAPGL-----LARLPGVKQLMQLRKMQGKGME 463
>gi|385804856|ref|YP_005841256.1| signal recognition particle protein [Haloquadratum walsbyi C23]
gi|339730348|emb|CCC41677.1| signal recognition particle 54K protein [Haloquadratum walsbyi C23]
Length = 466
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 24 MGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
MGD++ L ++V E + D++ E I G FTL+DM +Q + + +MGP Q+M MI
Sbjct: 291 MGDLKQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMI 350
Query: 80 PGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQG 136
PG +D L + + R++ IMDSM + EL++ S R+ R+A+G
Sbjct: 351 PGLGGGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELEDP-----RSVGASRVRRIARG 405
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMGGI 164
+G E+ V++L+ Q+ +K+ G+
Sbjct: 406 SGTDEETVRELLQQHKMMERTIKQFQGM 433
>gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
Length = 444
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 24 MGDIEGLIDKVNELKLDDNE--ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPG 81
MGDI LI+K E+ +D++E + + + G+FTL DM QF+ + MGP Q+M MIPG
Sbjct: 293 MGDIRSLIEKAEEV-IDEDEATKTMNNMLSGKFTLVDMRSQFEMMNSMGPMQQVMNMIPG 351
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
+ K + Q + ++ IM SM + E+ N K+ KQ+ RI R+A+GAGV E
Sbjct: 352 LGGK-IPKEASQMTEDKINGFKIIMSSMTEEEMLN---PKII-KQS-RIQRIARGAGVEE 405
Query: 142 KEVKDLISQYTKFAAVVK 159
+VK+L+ Y +K
Sbjct: 406 SDVKELLRYYNNTKKAMK 423
>gi|226501792|ref|NP_001142003.1| uncharacterized protein LOC100274153 [Zea mays]
gi|194706754|gb|ACF87461.1| unknown [Zea mays]
gi|413916134|gb|AFW56066.1| hypothetical protein ZEAMMB73_792527 [Zea mays]
Length = 556
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D +EL +KI +F D +Q Q I KMG FS+++GMI
Sbjct: 367 ILGMGDVLSFVEKAQEVMRQEDADELQKKILSAKFNFNDFLKQTQMIAKMGSFSRLIGMI 426
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +E+ LK + ++++ M L+ R+ +L ++ R RVA+ +G
Sbjct: 427 PGMNK--VTPAQIREAEKNLKFMESMINVMT---LEERERPELLAESRERRKRVAKDSGK 481
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
TE++V L++Q + A ++KM G
Sbjct: 482 TEQQVSQLVAQLFQMRAKMQKMMG 505
>gi|443321269|ref|ZP_21050328.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
gi|442789014|gb|ELR98688.1| signal recognition particle subunit FFH/SRP54 (srp54) [Gloeocapsa
sp. PCC 73106]
Length = 481
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 17 LYCGICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGDI L++K EL + D E++ KI +F D +Q + + MG I
Sbjct: 289 LASRILNMGDILTLVEKAQEELDIADLEKMHAKITEAKFDFNDFLKQMRLLKNMGSLGGI 348
Query: 76 MGMIPG---FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITR 132
+ +IPG S L+KG Q LK+ +++SM E N D L SK GR R
Sbjct: 349 LKLIPGMNKLSNSDLAKGESQ-----LKQTEAMINSMTKEERSNPD---LLSKSPGRRRR 400
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKK------------MGGIKGLF 168
+A+G+G EK++ L++ +T+ +++++ MGG+ GLF
Sbjct: 401 IAKGSGFQEKDISKLVTDFTRMRSMMQQMSSGGMPALPGGMGGMDGLF 448
>gi|218185264|gb|EEC67691.1| hypothetical protein OsI_35150 [Oryza sativa Indica Group]
Length = 550
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD+ ++K E ++ +D EL +KI +F D +Q QN+ KMG S+++GMI
Sbjct: 363 VLGMGDVLSFVEKAQEVMRQEDAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVVGMI 422
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ E E KRL + +N + R+ +L ++ R RVA+ +G
Sbjct: 423 PGMNKVTPAQIREAE-----KRLAFVESMINAMTAEEREKPELLAESRDRRIRVAEESGK 477
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGI 164
+E EV L++Q + A ++K+ G+
Sbjct: 478 SEHEVSQLVAQLFQMRAQMQKLMGV 502
>gi|119872111|ref|YP_930118.1| GTP-binding signal recognition particle [Pyrobaculum islandicum DSM
4184]
gi|158512993|sp|A1RS43.1|SRP54_PYRIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119673519|gb|ABL87775.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
islandicum DSM 4184]
Length = 433
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 79/134 (58%), Gaps = 13/134 (9%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K+ + + E+++++I+ G+ L +Q + ++K+GP S+++ ++P
Sbjct: 290 VLGMGDLDALVEKIK--AVFEEEKVLQEIESGRLDLLTFKKQIEGLLKLGPLSKVLQLLP 347
Query: 81 GFSQDFLSKGSEQE---SMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
G F +K SE++ S LK+ I+ SM EL N D RI R+A GA
Sbjct: 348 G---GFAAKISEEQVELSQKNLKKWYAILSSMTIEELKNPDIL-----NASRIRRIALGA 399
Query: 138 GVTEKEVKDLISQY 151
GVT K+VK++++ Y
Sbjct: 400 GVTPKDVKEMLTVY 413
>gi|429191533|ref|YP_007177211.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|448325331|ref|ZP_21514725.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
gi|429135751|gb|AFZ72762.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|445615834|gb|ELY69473.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
Length = 463
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + L++++ E + G FTL DM +Q + + MG Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTDLEEDDWDPEDMLQGNFTLNDMQKQMEAVNNMGALDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM D E K + K G +I
Sbjct: 348 DMIPGFGSGVKDQLPDDAMDVTQERMRTFSVIMDSMTDTE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E EV++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEDEVRELLQQYKMMEKTIKQFQGM 433
>gi|118579532|ref|YP_900782.1| signal recognition particle protein [Pelobacter propionicus DSM
2379]
gi|118502242|gb|ABK98724.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pelobacter
propionicus DSM 2379]
Length = 453
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 17 LYCGICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGD+ L++K + D E L +K+K QF L D Q Q I KMG I
Sbjct: 290 LVSRILGMGDVLTLVEKAQSVFDEKDAERLKQKLKKNQFDLEDFLAQLQQIRKMGSLESI 349
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
MGMIPG + Q S + R+ I+ SM GE N R R+A+
Sbjct: 350 MGMIPGMGKMMKQMQGAQPSDKEINRIEAIIRSMTPGERANHS-----IINGSRRLRIAK 404
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKM 161
G+G + EV L+ ++T+ VVK++
Sbjct: 405 GSGTSVPEVNQLLKRFTEAQKVVKQL 430
>gi|448366728|ref|ZP_21554851.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
gi|445654183|gb|ELZ07039.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
Length = 461
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTEIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E +V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTNEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|448351062|ref|ZP_21539872.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
gi|445635250|gb|ELY88421.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
Length = 461
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTEIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E +V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTNEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|51246651|ref|YP_066535.1| signal recognition particle protein (SRP54) [Desulfotalea
psychrophila LSv54]
gi|50877688|emb|CAG37528.1| probable signal recognition particle protein (SRP54) [Desulfotalea
psychrophila LSv54]
Length = 480
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 21 ICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ LI+K + D +L K++ QFTL D +Q Q I KMG QI+ M+
Sbjct: 321 ILGMGDVLTLIEKAEAVVDKDQANKLAHKLQTNQFTLEDFLDQIQQIKKMGSLDQILSMV 380
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ K + Q + L + I+ SM L R KL + T R R+A G+G
Sbjct: 381 PGINKLKKIKDAPQPNEKELGKTEAIIRSMT---LKERRNHKLIN--TSRRQRIADGSGT 435
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
+ +V ++ Y++ ++KKM G GL G
Sbjct: 436 SITDVNRVLKSYSEMLKMMKKMRGKPGLITG 466
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 17 LYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I MGD+ LI+K + + ++ ++L EK+ G F L D Q Q + KMGP +Q+
Sbjct: 289 LATRILGMGDVLSLIEKAQQQISQEEGKKLQEKLLAGTFDLEDFLRQLQQVKKMGPLTQL 348
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
+ MIPG Q L + Q S KR+ I+ SM E N D +S++ R+AQ
Sbjct: 349 LEMIPGMGQ-LLRQQQVQISDDEYKRIEAIILSMTPEERRNPDIIN-YSRR----RRIAQ 402
Query: 136 GAGVTEKEVKDLISQYTKFA---------AVVKKMGGIKGLFKGGD 172
G+G T EV L++Q+ + A + G ++GL G+
Sbjct: 403 GSGTTIAEVSQLLTQFKQMQRMMAELGQLAAGRSRGPLRGLLGAGN 448
>gi|218441087|ref|YP_002379416.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
gi|218173815|gb|ACK72548.1| signal recognition particle protein [Cyanothece sp. PCC 7424]
Length = 488
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K EL L D E++ KI QF D +Q + + MG ++ +I
Sbjct: 293 ILNMGDVLTLVEKAQEELDLSDVEKMQSKILQAQFDFNDFLKQMRLLKNMGSLGGLLKLI 352
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + LS + LKR ++++SM E N D L + GR R+A+G+G
Sbjct: 353 PGMGK--LSGSDIAKGETELKRTESMINSMTKEERANPD---LLASSPGRRRRIAKGSGH 407
Query: 140 TEKEVKDLISQYTKFAAVVKKMG 162
+E +V +LI +T+ A++K+MG
Sbjct: 408 SESDVSNLIKNFTRMRAMMKQMG 430
>gi|342321672|gb|EGU13604.1| Signal recognition particle 54 kDa protein, putative [Rhodotorula
glutinis ATCC 204091]
Length = 612
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 56/207 (27%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKL---DDNEELIEKIKHGQFTLRDMYEQFQNIMKM--- 69
P + MGD++GL+++ E+ L + E++++K++ G+FT+RD+ +Q +M M
Sbjct: 304 PFISKMLGMGDMQGLVERAQEMALANPERQEKMMKKLEKGEFTVRDLKDQLATVMGMCVA 363
Query: 70 -------------------------GPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMT 104
GP S + MIPG S+ G E S R+KR+
Sbjct: 364 GSFLRSSRSTAFELLTGKCRAYAYRGPLSNLASMIPGMSEMMGGGGEEDVSR-RMKRVAF 422
Query: 105 IMDSMNDGELDN-----RDGAKL-------------------FSKQTGRITRVAQGAGVT 140
I DSM ELD+ RD + R+ RVA+G+G +
Sbjct: 423 IFDSMTTEELDSDGSLFRDSVPSAKGKEKEKDEEKDPSNPMGLREPNKRVLRVARGSGTS 482
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGL 167
+EV++L++Q+ FA + K+MGG GL
Sbjct: 483 VQEVEELLAQHQMFAKMAKRMGGKNGL 509
>gi|153006211|ref|YP_001380536.1| signal recognition particle protein [Anaeromyxobacter sp. Fw109-5]
gi|152029784|gb|ABS27552.1| signal recognition particle protein [Anaeromyxobacter sp. Fw109-5]
Length = 550
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 14/179 (7%)
Query: 17 LYCGICCMGDIEGLI-DKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
L I GDI GL+ D + + E +KI G FTL D Q + + KMGP ++
Sbjct: 298 LASRILGFGDIVGLVKDFEQHVDEETAEAEAQKILSGDFTLEDFVNQIRLVRKMGPLGEL 357
Query: 76 MGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
M P F L +G + + A L +++ ++DSM E D GR+ R+A+
Sbjct: 358 MEKFPLFGD--LPEGFQFDDQA-LTKIVAMVDSMTKAERLRPD-----VITEGRVKRIAR 409
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMD 194
G+G EKEV+DL+ QY V+K++G GL +++ Q+M L + K M+
Sbjct: 410 GSGRGEKEVRDLLKQYNAMRGVMKQVGSAPGL-----LSRLPGVKQLMSLRKLQGKGME 463
>gi|435845547|ref|YP_007307797.1| signal recognition particle GTPase [Natronococcus occultus SP4]
gi|433671815|gb|AGB36007.1| signal recognition particle GTPase [Natronococcus occultus SP4]
Length = 464
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + +++ E E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMQQTDVEEEEWDPEDMLTGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMRAYSVIMDSMTETE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G +E +V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTSEDQVRELLEQYKMMERTIKQFQGM 433
>gi|167043460|gb|ABZ08157.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine microorganism HF4000_APKG2H5]
Length = 504
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Query: 24 MGDIEGLID-KVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
+GDI+GLID +L ++ L +++ G+FTL DMY Q + + K+G +++ +P
Sbjct: 344 LGDIQGLIDLAPGDLDQEEAARLAQRLMSGRFTLTDMYSQMEMMSKIGTVDKLLSHLPDA 403
Query: 83 ---SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
+S+ +Q+ L++ IMDSM E +D L ++ RI R+A+G+GV
Sbjct: 404 MFGGMGNMSRAQKQQMQGNLEKFRVIMDSMTQEE---KDQPHLL--KSSRIRRIARGSGV 458
Query: 140 TEKEVKDLISQYTKFAAVVKKM 161
EK+VK+L++Q+ + +++ M
Sbjct: 459 YEKDVKELLTQWNRSRKMMRGM 480
>gi|381179016|ref|ZP_09887879.1| signal recognition particle subunit FFH/SRP54 (srp54) [Treponema
saccharophilum DSM 2985]
gi|380769031|gb|EIC03007.1| signal recognition particle subunit FFH/SRP54 (srp54) [Treponema
saccharophilum DSM 2985]
Length = 443
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 17 LYCGICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
+ I MGDI L++K E + +++ + L +K+ G+F+L DM +QF+ + KMG S +
Sbjct: 290 IASRILGMGDIVSLVEKAQETVDIEEAQRLEKKMSRGEFSLNDMLDQFERVGKMGSISSL 349
Query: 76 MGMIPGFSQDFLSKGSEQES---MARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITR 132
M MIPG S G ES + +KR I+ +M E N R R
Sbjct: 350 MEMIPGLS------GKIDESKIDLGAMKRQKAIIQAMTKKERANH-----LIIGPSRRKR 398
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMGGIKGL 167
+A+G+G + EV LI Q+ K ++KK+ KGL
Sbjct: 399 IARGSGTSVAEVNKLIKQFEKTKLMMKKLTKNKGL 433
>gi|332705584|ref|ZP_08425660.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
gi|332355376|gb|EGJ34840.1| signal recognition particle subunit FFH/SRP54 [Moorea producens 3L]
Length = 479
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K E+ + D E++ +K+ +F D +Q + + MG +M ++
Sbjct: 293 ILGMGDVLTLVEKAQEEIDIADAEQMQQKMLEAKFDFSDFLKQMRLLKNMGSLGGLMKLV 352
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + LS Q+ +LK+ ++ SM E N D L + R R+AQG+G
Sbjct: 353 PGMGK--LSSSQLQQGETKLKQSEAMISSMTSEERRNPD---LLASSPSRRRRIAQGSGH 407
Query: 140 TEKEVKDLISQYTKFAAVVKKMG 162
TEK+V+ L+S++T+ +++++MG
Sbjct: 408 TEKDVRGLVSEFTRMRSLMQQMG 430
>gi|253741984|gb|EES98841.1| SRP GTPase [Giardia intestinalis ATCC 50581]
Length = 530
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 25 GDIEGLIDKVNELKLDDNEEL--IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
GDI GL + + +D + + ++ H F+ RD EQ +N+ KMGP +I M+PGF
Sbjct: 300 GDIMGLHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASMVPGF 359
Query: 83 SQDFLSKGSEQES-MARLKRLMTIMDSMNDGELDN------RDGAKLFSKQTGRITRVAQ 135
SQ S + +S + +L+ TIMDSM ELD+ ++G F R R+A
Sbjct: 360 SQMAASGDLDMDSEVKQLQIFNTIMDSMAAKELDSNTEILKKEGEDKFRS---RAKRIAI 416
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMG 162
G+G T +EV + + +F+ + KMG
Sbjct: 417 GSGYTVEEVLEFFDKAAEFSEMFGKMG 443
>gi|428226672|ref|YP_007110769.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
gi|427986573|gb|AFY67717.1| signal recognition particle subunit FFH/SRP54 (srp54) [Geitlerinema
sp. PCC 7407]
Length = 482
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K E L D E++ EKI +F D +Q + + MG ++ +I
Sbjct: 293 ILGMGDVLTLVEKAQEEFDLADAEKMQEKILEAKFDFNDFLKQMRFLKNMGSLGSVIKLI 352
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ +S ++ ++LKR +++ SM E N D L S R RVA+G+G
Sbjct: 353 PGLNK--ISSEQLEQGESQLKRAESMISSMTKAERRNPD---LLSSSPSRRQRVAKGSGH 407
Query: 140 TEKEVKDLISQYTKFAAVVKKMG 162
+E++V L+S + + A++++MG
Sbjct: 408 SERDVSKLVSDFQRMRAMMQQMG 430
>gi|448347056|ref|ZP_21535935.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
gi|445631393|gb|ELY84625.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
Length = 464
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V E +++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEETDIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPG +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMTETE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTDEEQVRELLQQYKMMERTMKQFQGM 433
>gi|448302117|ref|ZP_21492101.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
gi|445582113|gb|ELY36458.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
Length = 465
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + ++++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLGQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPGF +D L + + R+ IMDSM + E K + K G +I
Sbjct: 348 DMIPGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMTEAE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E+ V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTEEENVRELLQQYKMMEKTIKQFQGM 433
>gi|108864006|gb|ABG22369.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
Length = 482
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q Q I +MG FS+I+GMI
Sbjct: 293 ILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMI 352
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +E+ LK + ++++ M E R+ +L ++ R RVA+ +G
Sbjct: 353 PGMNK--VTPAQIREAEKNLKFMESMINVMTPEE---RERPELLAESRERRIRVAKESGK 407
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
E++V L++Q + A ++KM G
Sbjct: 408 NERQVSQLVAQLFRMRAQMQKMMG 431
>gi|115484239|ref|NP_001065781.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|62701662|gb|AAX92735.1| signal recognition particle protein, putative [Oryza sativa
Japonica Group]
gi|108864005|gb|ABG22368.1| Signal recognition particle 54 kDa protein, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113644485|dbj|BAF27626.1| Os11g0153700 [Oryza sativa Japonica Group]
gi|215765043|dbj|BAG86740.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615534|gb|EEE51666.1| hypothetical protein OsJ_33002 [Oryza sativa Japonica Group]
Length = 557
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q Q I +MG FS+I+GMI
Sbjct: 368 ILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMI 427
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +E+ LK + ++++ M E R+ +L ++ R RVA+ +G
Sbjct: 428 PGMNK--VTPAQIREAEKNLKFMESMINVMTPEE---RERPELLAESRERRIRVAKESGK 482
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
E++V L++Q + A ++KM G
Sbjct: 483 NERQVSQLVAQLFRMRAQMQKMMG 506
>gi|448337308|ref|ZP_21526388.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
gi|445625973|gb|ELY79324.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
Length = 463
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V E +++++ E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEETDIEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPG +D L + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMTETE-------KEYPKAIGASQIE 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTDEEQVRELLQQYKMMERTMKQFQGM 433
>gi|218185265|gb|EEC67692.1| hypothetical protein OsI_35151 [Oryza sativa Indica Group]
Length = 557
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q Q I +MG FS+I+GMI
Sbjct: 368 ILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSFSRIIGMI 427
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +E+ LK + ++++ M E R+ +L ++ R RVA+ +G
Sbjct: 428 PGMNK--VTPAQIREAEKNLKFMESMINVMTPEE---RERPELLAESRERRIRVAKESGK 482
Query: 140 TEKEVKDLISQYTKFAAVVKKMGG 163
E++V L++Q + A ++KM G
Sbjct: 483 NERQVSQLVAQLFRMRAQMQKMMG 506
>gi|448315945|ref|ZP_21505583.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
gi|445610291|gb|ELY64065.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
Length = 462
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 52 GQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS---QDFLSKGSEQESMARLKRLMTIMDS 108
GQFTL DM +Q + + MGP Q+M MIPGF +D L + + R++ IMDS
Sbjct: 324 GQFTLNDMQKQMEAMNNMGPLDQVMDMIPGFGGGIKDQLPDDAMDVTQERMRTFSVIMDS 383
Query: 109 MNDGELDNRDGAKLFSKQTG--RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
M D E K + K G +I R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 384 MTDTE-------KEYPKAIGASQIERIARGSGTSEEQVRELLQQYKMMERTIKQFQGM 434
>gi|242055585|ref|XP_002456938.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
gi|241928913|gb|EES02058.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
Length = 487
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 18/157 (11%)
Query: 24 MGDIEGLIDKVNE------LKLDDNEELIEK--------IKHGQFT--LRDMYEQFQNIM 67
MGD+ G +DK+ + + D +E +E+ +K FT LR +Y F+ +
Sbjct: 318 MGDLPGFMDKIEDAMTTMTMAADQGQEGLEQQLLHELTTVKGASFTFTLRALYSLFRLVQ 377
Query: 68 KMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLF--SK 125
+MGP ++ +P K E+ ++KR MTIMDSM+ ELD D KL +
Sbjct: 378 RMGPLGHLVSFLPAGLLGDKGKQEEEGQQDKIKRYMTIMDSMSAAELDGADPMKLMMTKQ 437
Query: 126 QTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMG 162
Q RI RVA+G+G +V +L+ ++ + A ++ ++
Sbjct: 438 QQSRINRVARGSGRPVSQVVELLQEHKRMAEMLSELA 474
>gi|242084798|ref|XP_002442824.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
gi|241943517|gb|EES16662.1| hypothetical protein SORBIDRAFT_08g003410 [Sorghum bicolor]
Length = 559
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q Q I +MG FS+++GMI
Sbjct: 370 ILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQMIAQMGSFSRLIGMI 429
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +E+ LK + ++++ M E R+ +L ++ R RVA+ +G
Sbjct: 430 PGMNK--VTPAQIREAEKNLKFMESMINVMTPEE---RERPELLAESRERRKRVAKDSGK 484
Query: 140 TEKEVKDLISQYTKFAAVVKK-MGGIKG 166
TE++V L++Q + A ++K MG I+G
Sbjct: 485 TEQQVGQLVAQLFQMRAKMQKMMGAIQG 512
>gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3334341|sp|O27376.1|SRP54_METTH RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 442
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 7/117 (5%)
Query: 46 IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTI 105
++ I G+FTLRDM QF+ + KMGP Q+M M+PG + L K + + + +++ + I
Sbjct: 316 LDAILSGKFTLRDMRVQFEMMGKMGPLQQVMSMLPGAGK--LPKDASRMTEETIRKYLII 373
Query: 106 MDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMG 162
MDSM + EL+ D K RI R+A+G+G ++VK+L+ Y +K +G
Sbjct: 374 MDSMTEEELEKPDIIK-----HSRIRRIARGSGTRNEDVKELLKYYRVTKKAMKGLG 425
>gi|73668456|ref|YP_304471.1| signal recognition particle protein Srp54 [Methanosarcina barkeri
str. Fusaro]
gi|121731303|sp|Q46E01.1|SRP54_METBF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|72395618|gb|AAZ69891.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanosarcina barkeri str. Fusaro]
Length = 443
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 21/168 (12%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
+ MGD++ L++K E L + + +E + G+FTL+DMY+Q + + KMGP QIM M+P
Sbjct: 288 LLGMGDLKSLMEKAEET-LSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLP 346
Query: 81 GFSQDF----LSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQG 136
LS Q + ++K TIMDSM + E+ + KL RI R+++G
Sbjct: 347 LGMGGMGGVKLSDEMFQATSDKMKNYKTIMDSMTEEEMTD---PKLIG--GSRIKRISRG 401
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMK 184
+G + +EV++L+ + +K F+GG N +MMK
Sbjct: 402 SGCSPEEVRELLKYHKTMQTALKG-------FRGG----KFNIQKMMK 438
>gi|254421926|ref|ZP_05035644.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
gi|196189415|gb|EDX84379.1| signal recognition particle protein [Synechococcus sp. PCC 7335]
Length = 491
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K E+ + D E+L EKI +F D +Q + + MG + IM MI
Sbjct: 293 ILGMGDVLTLVEKAQEEVDIADAEKLQEKILSAKFDFNDFLKQTRLMKNMGSLAGIMKMI 352
Query: 80 PG----FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQ 135
PG S D L +G +Q LKR +++SM ++ R ++ S R RVA+
Sbjct: 353 PGMGNKLSSDQLQQGEQQ-----LKRCEAMINSMT---MEERQNPEVLSGSPSRRRRVAK 404
Query: 136 GAGVTEKEVKDLISQYTKFAAVVKKMG 162
GAG EK+V L+S + + ++++MG
Sbjct: 405 GAGYAEKDVGKLVSDFQRMRGLMQQMG 431
>gi|448424654|ref|ZP_21582510.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|448481727|ref|ZP_21605057.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
gi|448504282|ref|ZP_21613899.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|448521573|ref|ZP_21618231.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445681864|gb|ELZ34289.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|445702163|gb|ELZ54123.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|445702513|gb|ELZ54461.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445821674|gb|EMA71461.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
Length = 463
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V E + +D + E + G+FTL+DM Q + KMGP Q+M
Sbjct: 288 LLGMGDLKQLSERVERAMQETQEEDGDWDPEDMLQGEFTLKDMKRQMDAMNKMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
MIPG D L + + R++R IMDSM + EL+N ++ + R+ R+
Sbjct: 348 DMIPGLGGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELEN---PRVVGQS--RVERI 402
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
A+G+G E+ V+ L+ Q++ + + G+
Sbjct: 403 ARGSGTDEETVQQLLEQHSMMEETIGQFQGM 433
>gi|448450371|ref|ZP_21592270.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
gi|445812223|gb|EMA62219.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
Length = 463
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V E + +D + E + G+FTL+DM Q + KMGP Q+M
Sbjct: 288 LLGMGDLKQLSERVERAMQETQEEDGDWDPEDMLQGEFTLKDMKRQMDAMNKMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRV 133
MIPG D L + + R++R IMDSM + EL+N ++ + R+ R+
Sbjct: 348 DMIPGLGGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELEN---PRVVGQS--RVERI 402
Query: 134 AQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
A+G+G E+ V+ L+ Q++ + + G+
Sbjct: 403 ARGSGTDEETVQQLLEQHSMMEETIGQFQGM 433
>gi|440583671|emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
angustifolius]
Length = 731
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q +++ +MG S+++GMI
Sbjct: 376 ILGMGDVLSFVEKSKEVMQQEDAEELQKKIMSAKFDFNDFLKQTRSVARMGSVSRVIGMI 435
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ +++ L+ ++++M E R+ +L ++ R RVAQ +G
Sbjct: 436 PGMAK--VTPAQIRDAEKNLQITEAMIEAMTPEE---REKPELLAESPERRKRVAQDSGK 490
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVLH 199
TE++V L++Q + +M + G+ +GG + N + +K +++ + LH
Sbjct: 491 TEQQVSQLVAQIFQMRV---RMKNLLGVMEGGSMPALSNLEESLKTEEKIQNLDAYLFLH 547
>gi|402820240|ref|ZP_10869807.1| hypothetical protein IMCC14465_10410 [alpha proteobacterium
IMCC14465]
gi|402510983|gb|EJW21245.1| hypothetical protein IMCC14465_10410 [alpha proteobacterium
IMCC14465]
Length = 504
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ GL++K E L + E++ ++K GQFTL DM EQ + + +MG + ++ M+
Sbjct: 292 ILGMGDVVGLVEKAAETLDAEKAEKMAARMKKGQFTLEDMAEQLKQMQRMGGMAGVLSML 351
Query: 80 PGFSQDFLSKGSEQESM-----ARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVA 134
PG + L K ++Q L R I+ SM E DN KL + R RVA
Sbjct: 352 PG---NLLGKKAKQLGNLGMDDKELIRQAAIVSSMTQAEKDN---PKLLN--ASRKKRVA 403
Query: 135 QGAGVTEKEVKDLISQYTKFAAVVKKM--GGIKGL 167
G+G ++V L+ + + A ++KKM GG+ G+
Sbjct: 404 AGSGTQVQDVNKLVKMHRQMADMMKKMGKGGLSGM 438
>gi|359481606|ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
chloroplastic-like [Vitis vinifera]
gi|297740127|emb|CBI30309.3| unnamed protein product [Vitis vinifera]
Length = 567
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ ++K E ++ +D EEL +KI +F D +Q + + +MG ++++GMI
Sbjct: 372 ILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMGSMTRVLGMI 431
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + ++ +E+ LK + ++++M E R+ +L ++ R RVAQ +G
Sbjct: 432 PGMGK--VTPAQIREAEKSLKMMEGMIEAMTPEE---REKPELLAESPVRRKRVAQDSGK 486
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQ 188
TE++V L++Q + +M + G+ +GG I N + +K Q+
Sbjct: 487 TEQQVSQLVAQLFQMRV---RMKNLMGVMEGGSIPALSNLEETLKSEQK 532
>gi|336065750|ref|YP_004560608.1| signal recognition particle protein SRP54 [Erysipelothrix
rhusiopathiae str. Fujisawa]
gi|334295696|dbj|BAK31567.1| signal recognition particle protein SRP54 [Erysipelothrix
rhusiopathiae str. Fujisawa]
Length = 431
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L++K E + ++ +E E++ GQFTL DM Q Q + KMGP S +M M+
Sbjct: 290 ILGMGDIVSLVEKAQEKMDIEASERSAERMMKGQFTLDDMLIQLQQVSKMGPLSGLMKMM 349
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG +Q + + ++ + +K+ ++ SM E R+ K+ ++ R R+A+G+G
Sbjct: 350 PGANQ-LAGQIDDADASSTMKKTEAMILSMTPEE---RNDPKII--RSTRKRRIAEGSGT 403
Query: 140 TEKEVKDLISQYTK 153
+ +V L+SQY K
Sbjct: 404 STTDVNRLLSQYEK 417
>gi|262303763|gb|ACY44474.1| signal recognition particle [Abacion magnum]
Length = 98
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 36/43 (83%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRD 58
P + MGDIEGLIDKVNELKLD NEELIEK+KHGQFTLRD
Sbjct: 56 PFVSKLLGMGDIEGLIDKVNELKLDXNEELIEKLKHGQFTLRD 98
>gi|410670619|ref|YP_006922990.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
gi|409169747|gb|AFV23622.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
Length = 439
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
Query: 24 MGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP-GF 82
MGDI+ LI+K E L D E ++ + G+FTL+DMY+Q +++ K+GP QIM M+P G
Sbjct: 291 MGDIKSLIEKAEE-TLADEELDVQSMMMGRFTLKDMYKQLESLNKLGPMKQIMQMLPLGG 349
Query: 83 SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEK 142
+ + + Q + +LKR +MDSM + E+ N ++ + RI R+A G+G + +
Sbjct: 350 LGAKIPEDAYQVTGDKLKRYRILMDSMTEEEMLN---PRVIG--SSRIKRIAIGSGSSAE 404
Query: 143 EVKDLISQY 151
+V++L+ +
Sbjct: 405 DVRELLKYH 413
>gi|323341682|ref|ZP_08081915.1| signal recognition particle protein [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322464107|gb|EFY09300.1| signal recognition particle protein [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 431
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L++K E + ++ +E E++ GQFTL DM Q Q + KMGP S +M M+
Sbjct: 290 ILGMGDIVSLVEKAQEKMDIEASERSAERMMKGQFTLDDMLIQLQQVSKMGPLSGLMKMM 349
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG +Q + + ++ + +K+ ++ SM E R+ K+ ++ R R+A+G+G
Sbjct: 350 PGANQ-LAGQIDDADASSTMKKTEAMILSMTPEE---RNDPKII--RSTRKRRIAEGSGT 403
Query: 140 TEKEVKDLISQYTK 153
+ +V L+SQY K
Sbjct: 404 STTDVNRLLSQYEK 417
>gi|327401116|ref|YP_004341955.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
gi|327316624|gb|AEA47240.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
Length = 436
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 10/133 (7%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEEL-IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGDI+ L++KV ++ EEL E G FTL+D+Y+Q + + KMGP S+I ++
Sbjct: 284 LLGMGDIKALLEKVE--RVVSEEELDPEAFLKGTFTLKDVYKQIEAMNKMGPISKIFELL 341
Query: 80 P-GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
P GFS E + ++K+ IMDSM + EL N K+ + RI R+A G+G
Sbjct: 342 PFGFSMKVDDSMMEM-TQEKMKKFRVIMDSMTEEELLN---PKIID--SSRIRRIAIGSG 395
Query: 139 VTEKEVKDLISQY 151
+ +EVK+L+ Y
Sbjct: 396 TSPQEVKELLKYY 408
>gi|320527196|ref|ZP_08028382.1| signal recognition particle protein [Solobacterium moorei F0204]
gi|320132387|gb|EFW24931.1| signal recognition particle protein [Solobacterium moorei F0204]
Length = 471
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K E L L++ ++ E++ GQFT+ DM +QF+ I K+GP IM MI
Sbjct: 295 ILGMGDVVTLVEKAQEKLDLEEANKMAERMLAGQFTMADMLKQFEQIQKLGPLGGIMKMI 354
Query: 80 PGFSQ--DFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG +Q L + +SM +K I+ SM E + + + K+ RVA+G+
Sbjct: 355 PGMNQYAGMLDEAKASDSMRHMK---AIIQSMTLEERAHPEKMRGTMKK-----RVARGS 406
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMGGIK 165
G + EV LI+Q+ K ++ MG ++
Sbjct: 407 GRSVDEVNKLINQFGKMKKLMDSMGNMQ 434
>gi|404253854|ref|ZP_10957822.1| signal recognition particle protein [Sphingomonas sp. PAMC 26621]
Length = 505
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ GL+++ E ++++D E++ K+ G+F L D+ Q + +MG + GMI
Sbjct: 294 ILGMGDVVGLVERAAEAIQVEDAEKMAAKLAKGEFDLDDLRAQLGQMRRMGGLGALAGMI 353
Query: 80 PGF--SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG ++ ++ G+ E + L R ++ SM E R +L + + R RVA+G+
Sbjct: 354 PGMAKAKQAMASGAMDEKI--LVRFDAMITSMTPKE---RRKPELLNAK--RKIRVAKGS 406
Query: 138 GVTEKEVKDLISQYTKFAAV---VKKMGGIKGLFK 169
G T +EV L+ + + A +KKMGG+KG+ K
Sbjct: 407 GTTVQEVNKLLKMHQEMANAMKKIKKMGGLKGMAK 441
>gi|254414856|ref|ZP_05028620.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178345|gb|EDX73345.1| signal recognition particle protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 486
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ L++K E+ + D ++ EK+ + QF D +Q + + MG +M ++
Sbjct: 293 ILGMGDVLTLVEKAQEEIDMADAAQMQEKMLNAQFDFSDFLKQMRLLKNMGSLGGLMKLM 352
Query: 80 PG---FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQG 136
PG S D L KG +LK+ +++SM E N D L + R R+A+G
Sbjct: 353 PGMGKLSSDQLEKGE-----GKLKQTEAMINSMTAEERRNPD---LLAGSPSRRRRIARG 404
Query: 137 AGVTEKEVKDLISQYTKFAAVVKKMG 162
+G +E+EV LIS++TK +++K+MG
Sbjct: 405 SGHSEREVSSLISEFTKMRSLMKQMG 430
>gi|384564944|ref|ZP_10012048.1| signal recognition particle protein [Saccharomonospora glauca K62]
gi|384520798|gb|EIE97993.1| signal recognition particle protein [Saccharomonospora glauca K62]
Length = 510
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ LI++ + + E K+ G+ TL D EQ Q + +MGP ++GM+
Sbjct: 296 ILGMGDVLTLIEQAEQAFDQEKAERAAAKLGTGELTLEDFLEQMQAVRRMGPIGNLLGML 355
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG Q + + Q + L RL I+ M E R K+ + R R+A+G+GV
Sbjct: 356 PGAGQ--MKEQLAQVDDSHLDRLQAIIRGMTPAE---RANPKIIN--ASRRQRIAKGSGV 408
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDIT 174
T +EV DL++++ + ++++M G G GG T
Sbjct: 409 TVREVNDLVNRFFEARKMMQQMAGRFGFGLGGSAT 443
>gi|320354484|ref|YP_004195823.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
gi|320122986|gb|ADW18532.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfobulbus propionicus DSM 2032]
Length = 449
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 21 ICCMGDIEGLIDKVNELKLDDN-EELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ LI+K + N E L +KI+ FTL D +Q Q I KMG QIMGMI
Sbjct: 293 ILGMGDVLSLIEKAEAVVDQKNAERLAKKIQKNAFTLEDFLDQIQQIKKMGTLEQIMGMI 352
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ K + + L + I+ SM L R ++ R R+A G+G
Sbjct: 353 PGINKLKQLKDAPKPDQKELVKTEAIIRSMT---LKERRNHRIID--ASRRVRIANGSGT 407
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGLFKGG 171
+ EV ++ YT ++K + G KG+ GG
Sbjct: 408 SVAEVNRVLKSYTMMLKMMKNLKG-KGIVSGG 438
>gi|335441201|ref|ZP_08561922.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
gi|334888372|gb|EGM26671.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
Length = 465
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 16/140 (11%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEEL----IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD++ L ++V + EE E + G+FTL+DM +Q + + KMGP Q+M
Sbjct: 288 LLGMGDLKQLTERVERAMEETQEEEGDWGPEDMLDGEFTLKDMRKQMEAMNKMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPG D L + + R++ IMDSM D EL+N +Q G R
Sbjct: 348 DMIPGLGGGMMDQLPDDAMDVTQERMRDFEVIMDSMTDDELEN-------PRQIGRSRTE 400
Query: 132 RVAQGAGVTEKEVKDLISQY 151
R+A+G+G E+ +++L+ Q+
Sbjct: 401 RIARGSGKPEERIRELLEQH 420
>gi|326487934|dbj|BAJ89806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495310|dbj|BAJ85751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 554
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 21 ICCMGDIEGLIDKVNEL-KLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
+ MGD+ ++K E+ + +D EL +KI +F D +Q QN+ KMG S+++GMI
Sbjct: 363 VLGMGDVLSFVEKAQEVVRQEDTTELQKKIMSAKFDFNDFLKQTQNVAKMGSMSRVIGMI 422
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG ++ ++ E E KRL + +N + ++ +L ++ R RVA+ +
Sbjct: 423 PGMNKVTPAQIREAE-----KRLAFVESMINAMTAEEKEKPELLAESRERRIRVAEESEK 477
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGI 164
TE+EV L++Q + A +KK+ G+
Sbjct: 478 TEQEVSQLVAQLFQMRAQMKKLMGM 502
>gi|448634293|ref|ZP_21674691.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
gi|445749266|gb|EMA00711.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
Length = 469
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEEL-IEKIKHGQFTLRDMYEQFQNIMKMGPFSQI 75
+ MGD++ L ++V E + D+E+ E + GQFTL+DM +Q Q + MGP Q+
Sbjct: 288 LLGMGDLKQLTERVERAMEETQEGDDEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQV 347
Query: 76 MGMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITR 132
M MIPG D L + + R++ IMDSM + EL+N ++ + R R
Sbjct: 348 MDMIPGLGGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEAELEN---PRVVGQ--SRTER 402
Query: 133 VAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
+ +G+G E+ V++L+ Q+ + ++K+ G+
Sbjct: 403 ICRGSGKPEERVRELLQQHKQMEQMLKQFQGM 434
>gi|20095048|ref|NP_614895.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
gi|23822175|sp|Q8TUY9.1|SRP54_METKA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|19888324|gb|AAM02825.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
Length = 447
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 51 HGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMN 110
G+FTL+D+YEQ + + KMGP +++ +PG + Q + RLK+ IMDSM
Sbjct: 320 EGEFTLKDLYEQLEALSKMGPVDKLLQYVPGMGGGRNVRKISQITEERLKKYKVIMDSMT 379
Query: 111 DGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYTKFAAVVKKM 161
+ EL+N ++ +K RI R+A G+G +E++V +L++ Y V++ +
Sbjct: 380 EKELEN---PEILNKS--RIRRIAIGSGTSERDVIELLNHYRMMKDVIEDI 425
>gi|229582222|ref|YP_002840621.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
gi|259511387|sp|C3NHT9.1|SRP54_SULIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228012938|gb|ACP48699.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
Length = 447
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 28/166 (16%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIK-----HGQFTLRDMYEQFQNIMKMGPFSQI 75
I MGDIE +++KV L++ E++ +K++ G+ TLRD+Y Q + KMGP S++
Sbjct: 291 ILGMGDIESILEKVK--GLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKV 348
Query: 76 MGMIPGF-------SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG 128
+ IPG S+D L G E +++R + ++SM EL+N + K
Sbjct: 349 LQHIPGLGVMLPTPSEDQLKLGEE-----KIRRWLAALNSMTYKELEN---PSIIDKS-- 398
Query: 129 RITRVAQGAGVTEKEVKDLISQYTKFAAVVK----KMGGIKGLFKG 170
R+ R+A+G+G+ ++V++L+ Y ++K + G I LF G
Sbjct: 399 RMRRIAEGSGLEVEDVRELLEWYNNMNKLLKMVKRRRGSIDKLFGG 444
>gi|395493528|ref|ZP_10425107.1| signal recognition particle protein [Sphingomonas sp. PAMC 26617]
Length = 502
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGD+ GL+++ E ++++D E++ K+ G+F L D+ Q + +MG + GMI
Sbjct: 294 ILGMGDVVGLVERAAEAIQVEDAEKMAAKLAKGEFDLDDLRAQLGQMRRMGGLGALAGMI 353
Query: 80 PGF--SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
PG ++ ++ G+ E + L R ++ SM E R +L + + R RVA+G+
Sbjct: 354 PGMAKAKQAMASGAIDEKI--LVRFDAMITSMTPKE---RRKPELLNAK--RKIRVAKGS 406
Query: 138 GVTEKEVKDLISQYTKFAAV---VKKMGGIKGLFK 169
G T +EV L+ + + A +KKMGG+KG+ K
Sbjct: 407 GTTVQEVNKLLKMHQEMANAMKKIKKMGGLKGMAK 441
>gi|229579027|ref|YP_002837425.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus Y.G.57.14]
gi|284997634|ref|YP_003419401.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
gi|259511388|sp|C3NDW4.1|SRP54_SULIY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228009741|gb|ACP45503.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus Y.G.57.14]
gi|284445529|gb|ADB87031.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
Length = 447
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 28/166 (16%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIK-----HGQFTLRDMYEQFQNIMKMGPFSQI 75
I MGDIE +++KV L++ E++ +K++ G+ TLRD+Y Q + KMGP S++
Sbjct: 291 ILGMGDIESILEKVK--GLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKV 348
Query: 76 MGMIPGF-------SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG 128
+ IPG S+D L G E +++R + ++SM EL+N + K
Sbjct: 349 LQHIPGLGVMLPTPSEDQLKLGEE-----KIRRWLAALNSMTYKELEN---PSIIDKS-- 398
Query: 129 RITRVAQGAGVTEKEVKDLISQYTKFAAVVK----KMGGIKGLFKG 170
R+ R+A+G+G+ ++V++L+ Y ++K + G I LF G
Sbjct: 399 RMRRIAEGSGLEVEDVRELLEWYNNMNKLLKMVKRRRGSIDKLFGG 444
>gi|227830212|ref|YP_002831992.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus L.S.2.15]
gi|259511385|sp|C3MPN4.1|SRP54_SULIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227456660|gb|ACP35347.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus L.S.2.15]
Length = 447
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 28/166 (16%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIK-----HGQFTLRDMYEQFQNIMKMGPFSQI 75
I MGDIE +++KV L++ E++ +K++ G+ TLRD+Y Q + KMGP S++
Sbjct: 291 ILGMGDIESILEKVK--GLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKV 348
Query: 76 MGMIPGF-------SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG 128
+ IPG S+D L G E +++R + ++SM EL+N + K
Sbjct: 349 LQHIPGLGVMLPTPSEDQLKLGEE-----KIRRWLAALNSMTYKELEN---PSIIDKS-- 398
Query: 129 RITRVAQGAGVTEKEVKDLISQYTKFAAVVK----KMGGIKGLFKG 170
R+ R+A+G+G+ ++V++L+ Y ++K + G I LF G
Sbjct: 399 RMRRIAEGSGLEVEDVRELLEWYNNMNKLLKMVKRRRGSIDKLFGG 444
>gi|239908107|ref|YP_002954848.1| signal recognition particle protein [Desulfovibrio magneticus RS-1]
gi|239797973|dbj|BAH76962.1| signal recognition particle protein [Desulfovibrio magneticus RS-1]
Length = 505
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI LI+K ++ ++ E+ K++ QFTL D Q + I K+G ++ +I
Sbjct: 293 ILGMGDILTLIEKAQTDVDAEEAAEMERKLRKAQFTLEDFRTQMRRIKKLGSLEGLLKLI 352
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG SQ G Q + R+ I++SM E RD KL + T R R+A+G+GV
Sbjct: 353 PGMSQVRKQLGDVQMPEKEMARVEAIINSMTKAE---RDNPKLIN--TSRRERIAKGSGV 407
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKGL 167
T EV L+ +T+ ++++M G KG+
Sbjct: 408 TVLEVSQLLKNFTQMQKMMQRMMGGKGM 435
>gi|332295825|ref|YP_004437748.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Thermodesulfobium narugense DSM 14796]
gi|332178928|gb|AEE14617.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Thermodesulfobium narugense DSM 14796]
Length = 437
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 80
I MGDIEGLI++V+++K+D +++ E+I+ F E + I KMGP +++ MIP
Sbjct: 289 IVGMGDIEGLIERVSDIKIDTSKKPPEEIEKWNFD--TFLESMRQIRKMGPLEELLSMIP 346
Query: 81 GFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVT 140
GFS K + ++KR+ +M SM E R ++ R R+A+G+G +
Sbjct: 347 GFSNIKQMKNMIPDE-KQMKRIEAVMLSMTPKE---RKKPEIIDASRKR--RIAKGSGTS 400
Query: 141 EKEVKDLISQYTKFAAVVKKMGGIKGLFKG 170
+EV L+ QY F KKM K L KG
Sbjct: 401 IQEVNQLLKQYEMF----KKMFKSKNLKKG 426
>gi|227827525|ref|YP_002829305.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus M.14.25]
gi|229584728|ref|YP_002843230.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238619682|ref|YP_002914508.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|385773194|ref|YP_005645760.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
gi|385775828|ref|YP_005648396.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus REY15A]
gi|259511383|sp|C3N5B0.1|SRP54_SULIA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511384|sp|C4KGX6.1|SRP54_SULIK RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511386|sp|C3MYM8.1|SRP54_SULIM RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227459321|gb|ACP38007.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus M.14.25]
gi|228019778|gb|ACP55185.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238380752|gb|ACR41840.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|323474576|gb|ADX85182.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus REY15A]
gi|323477308|gb|ADX82546.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
Length = 447
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 28/166 (16%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIK-----HGQFTLRDMYEQFQNIMKMGPFSQI 75
I MGDIE +++KV L++ E++ +K++ G+ TLRD+Y Q + KMGP S++
Sbjct: 291 ILGMGDIESILEKVK--GLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKV 348
Query: 76 MGMIPGF-------SQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG 128
+ IPG S+D L G E +++R + ++SM EL+N + K
Sbjct: 349 LQHIPGLGVMLPTPSEDQLKLGEE-----KIRRWLAALNSMTYKELEN---PSIIDKS-- 398
Query: 129 RITRVAQGAGVTEKEVKDLISQYTKFAAVVK----KMGGIKGLFKG 170
R+ R+A+G+G+ ++V++L+ Y ++K + G I LF G
Sbjct: 399 RMRRIAEGSGLEVEDVRELLEWYNNMNKLLKMVKRRRGSIDKLFGG 444
>gi|374633768|ref|ZP_09706133.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
gi|373523556|gb|EHP68476.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
Length = 447
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 23/150 (15%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKH-----GQFTLRDMYEQFQNIMKMGPFSQI 75
+ MGD+E +I+K+ ++D E + +K++ + TLRD+Y+Q + KMGP S+I
Sbjct: 291 VLGMGDVEAIIEKIK--AVEDYEGIQKKMQEVTSGKSRLTLRDLYKQIIAMRKMGPLSKI 348
Query: 76 MGMIPGFS------QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGR 129
+ ++PG + +D + G + +++R + IM+SM ELDN L KQ R
Sbjct: 349 LQLMPGINLMGDIPEDQIKVGEK-----KMQRWLAIMNSMTYEELDN---PSLLDKQ--R 398
Query: 130 ITRVAQGAGVTEKEVKDLISQYTKFAAVVK 159
+ R+A G+G +EVK+LI + +K
Sbjct: 399 MKRIAMGSGTEVEEVKELIEHFNTIQRTLK 428
>gi|284162145|ref|YP_003400768.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Archaeoglobus profundus DSM 5631]
gi|284012142|gb|ADB58095.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Archaeoglobus profundus DSM 5631]
Length = 435
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 10/130 (7%)
Query: 24 MGDIEGLIDKVNELKLDDNEEL-IEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIP-G 81
MGDI+ LI+KV ++ EEL EK G FTL+D+Y+Q + + KMGP +I ++P G
Sbjct: 287 MGDIKALIEKVE--RVAKQEELDPEKFLKGTFTLKDIYKQIEAMQKMGPIKKIFELLPFG 344
Query: 82 FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTE 141
F E + ++K+ IMDSM + EL N K+ + RI R+A G+G T
Sbjct: 345 FGLKVDDNIMEM-TQEKMKKFKVIMDSMTEEELLN---PKIID--SSRIRRIAIGSGTTP 398
Query: 142 KEVKDLISQY 151
++VK+L+ Y
Sbjct: 399 QDVKELLRYY 408
>gi|302761692|ref|XP_002964268.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
gi|300167997|gb|EFJ34601.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
Length = 467
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 30/184 (16%)
Query: 24 MGDIEGLIDKVNELKLDD-NEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGF 82
MGDI G +K+ E+ + EL++K+ G + + + +Q +NI MG SQ+M MIPGF
Sbjct: 295 MGDIAGFANKIKEVVPSELQPELVQKLADGNISFKFLCDQIENITSMGSLSQLMSMIPGF 354
Query: 83 S----QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
+ Q F + + ++ I+DSM + E R+ + L RI R+A+G+G
Sbjct: 355 NNINVQSF--------DIQQFRKYRVILDSMTNEE---RNSSSL---SESRILRLAKGSG 400
Query: 139 VTEKEVKDLISQYTKFAAVVKKMGGIKGLFKGGDITKNVNQTQMMKLNQQMAKMMDPRVL 198
+ V+ +++ + K+M G+K L K GD+ K K Q ++KM+ ++
Sbjct: 401 TSVDNVQQMVNHVKTMS---KQMKGLK-LNKKGDLGKG-------KSMQDLSKMLPANIV 449
Query: 199 HQMG 202
Q G
Sbjct: 450 KQFG 453
>gi|339018071|ref|ZP_08644214.1| signal recognition particle GTPase FFH/SRP54 [Acetobacter
tropicalis NBRC 101654]
gi|338752848|dbj|GAA07518.1| signal recognition particle GTPase FFH/SRP54 [Acetobacter
tropicalis NBRC 101654]
Length = 478
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 21 ICCMGDIEGLIDKV-NELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I +GDI GL++K + L ++ E L +K+ G+F L D Q + I K+G S I+GM+
Sbjct: 309 ILGLGDIAGLVEKAADTLDHEEGERLAKKMMAGKFDLDDYASQIRQINKLGSISGIVGML 368
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG + + G + + LK+ + I+ SM GE R + + R R+A G+G
Sbjct: 369 PGMGKLKEALGDKDLDTSVLKKHLAIISSMTKGE---RKKPAII--KASRKKRIAAGSGT 423
Query: 140 TEKEVKDLISQYTKFAAVVKKMG--GIKGLFKGG 171
T +EV L+ Q+ + ++K+ G+KGL + G
Sbjct: 424 TVQEVNKLLKQFDMMSDMMKRFNKLGVKGLMRQG 457
>gi|296109473|ref|YP_003616422.1| GTP-binding signal recognition particle SRP54 G- domain protein
[methanocaldococcus infernus ME]
gi|295434287|gb|ADG13458.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus infernus ME]
Length = 448
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 33 KVNELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQDFLSKGSE 92
K +E+ + EE +E I G+FTL ++ Q + I MG +I+ MIPG S + K
Sbjct: 303 KADEIIDEKAEESVEAIMRGKFTLNELKAQLEAIENMGSMKKILSMIPGLSG--MPKELS 360
Query: 93 QESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGVTEKEVKDLISQYT 152
+ A++KR I+DSM ++ R+ K+ + RI R+A+G+G +E EVK+++ Y
Sbjct: 361 HLTEAKIKRYKVIIDSMT---MEERENPKII--KASRIRRIARGSGSSESEVKEVLRYYE 415
Query: 153 KFAAVVKKMGGIKGLFKGGDITKNVNQ 179
++K+ K L GG + + + Q
Sbjct: 416 TTKNAIEKLRKGKMLRVGGPLGQILRQ 442
>gi|157813200|gb|ABV81345.1| putative signal recognition particle protein [Podura aquatica]
Length = 101
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 16 PLYCGICCMGDIEGLIDKVNELKLDDNEELIEKIKHGQFTLRDMYE 61
P + MGDIEGL+DKVN+L L++N+ELI+KIKHGQFTLRDMYE
Sbjct: 56 PFISKLLGMGDIEGLMDKVNQLNLENNDELIDKIKHGQFTLRDMYE 101
>gi|146304520|ref|YP_001191836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
gi|172046932|sp|A4YHL0.1|SRP54_METS5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|145702770|gb|ABP95912.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
Length = 446
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 23/150 (15%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNEELIEKIKH-----GQFTLRDMYEQFQNIMKMGPFSQI 75
I MGD+E +I+K+ ++D E + +K+ + TLRDMY+Q + KMGP S+I
Sbjct: 291 ILGMGDLEAIIEKMK--AMEDYEGIQKKMGEVMTGKSKLTLRDMYKQIVAVRKMGPLSKI 348
Query: 76 MGMIPG------FSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGR 129
+ +IPG +D + G + +++R ++IM+SM ELDN + KQ R
Sbjct: 349 LQLIPGMNMMGDIPEDQVKVGEQ-----KMQRWLSIMNSMTYQELDN---PSIIDKQ--R 398
Query: 130 ITRVAQGAGVTEKEVKDLISQYTKFAAVVK 159
+ R+A G+G +EV++LI + +K
Sbjct: 399 MRRIAMGSGTEVEEVRELIEHFNTVQRTLK 428
>gi|448320595|ref|ZP_21510081.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
gi|445605497|gb|ELY59419.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
Length = 466
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 52 GQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFS---QDFLSKGSEQESMARLKRLMTIMDS 108
GQFTL DM +Q + + MGP Q+M MIPGF +D L + + R++ IMDS
Sbjct: 324 GQFTLNDMQKQMEAMNNMGPLDQVMDMIPGFGGGIKDQLPDDAMDVTQERMRAFSVIMDS 383
Query: 109 MNDGELDNRDGAKLFSKQTG--RITRVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
M + E K + K G +I R+A+G+G +E++V++L+ QY +K+ G+
Sbjct: 384 MTETE-------KEYPKAIGADQIERIARGSGTSEEQVRELLQQYKMMERTIKQFQGM 434
>gi|289548587|ref|YP_003473575.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
gi|289182204|gb|ADC89448.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
Length = 437
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I +GDI+ L+++ + + D+ + L +I G+F L DM +Q + ++ MGP +I+GM+
Sbjct: 288 ILGLGDIQSLVERAQQVIPEDEAQALAVRIMKGEFDLEDMLKQIRFVLNMGPLDKIIGML 347
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG Q + E + LKR I+ SM E N L KQ R+A+G+G
Sbjct: 348 PGLGQ-YAKHLKLDEKL--LKRKEAIILSMTKEERKNPAIINLSRKQ-----RIARGSGT 399
Query: 140 TEKEVKDLISQYTKFAAVVKKMGGIKG 166
T EV L+ +Y + +++K+ KG
Sbjct: 400 TVSEVNKLLKEYEEARKLIRKLKNAKG 426
>gi|223986417|ref|ZP_03636422.1| hypothetical protein HOLDEFILI_03734 [Holdemania filiformis DSM
12042]
gi|223961613|gb|EEF66120.1| hypothetical protein HOLDEFILI_03734 [Holdemania filiformis DSM
12042]
Length = 462
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 21 ICCMGDIEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMI 79
I MGDI L+++ E + L+ +E+ K+ G FTL DM +Q + + KMG IM MI
Sbjct: 295 ILGMGDIMTLVEQAQEKMDLEQSEKSARKMMEGTFTLDDMLQQVEQVQKMGSLGSIMKMI 354
Query: 80 PGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAGV 139
PG +Q F S+ ++++ ++ R I+ SM E +D L + R R+A G+G
Sbjct: 355 PGLNQ-FASQMDDEKTTRQMNRSKAIIRSMTKEE--RQDPGIL---RASRKKRIAAGSGT 408
Query: 140 TEKEVKDLISQYTK 153
T +EV L++Q+ K
Sbjct: 409 TVQEVNALVNQFEK 422
>gi|374296102|ref|YP_005046293.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
gi|359825596|gb|AEV68369.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
Length = 450
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 15 FP--LYCGICCMGDIEGLIDKVNELKLDDNE--ELIEKIKHGQFTLRDMYEQFQNIMKMG 70
FP + I MGD+ LI+K E D+ + EL K++ QFTL D EQ Q I KMG
Sbjct: 286 FPDRMASRILGMGDVLSLIEKAQE-AFDEKKALELERKMRTQQFTLEDFLEQMQQIKKMG 344
Query: 71 PFSQIMGMIPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRI 130
P ++I+GMIPG + + L+ + +S L R I+ SM E R+ + + R
Sbjct: 345 PLNKILGMIPGINAEALNAINTADSEKELARFEAIIKSMTKQE---RNDPSIIN--GSRR 399
Query: 131 TRVAQGAGVTEKEVKDLISQYTKFAAVVKKM 161
R+A G+G ++V ++ + + ++K M
Sbjct: 400 KRIAAGSGTKVQDVNKVLKSFEEMKKMMKLM 430
>gi|283780035|ref|YP_003370790.1| signal recognition particle protein [Pirellula staleyi DSM 6068]
gi|283438488|gb|ADB16930.1| signal recognition particle protein [Pirellula staleyi DSM 6068]
Length = 491
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 21 ICCMGDIEGLIDKVNELKLDDNE--ELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM 78
I +GD+ GL+D V +D+ + EL K+ G FTL D +Q +++++ G +++GM
Sbjct: 293 ILGLGDVLGLVDVVRS-AVDEQQAKELEAKLAAGDFTLDDFKKQLKSVLQPGLMMKMLGM 351
Query: 79 IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGAG 138
+PG D S ++ +RL+ I+DSM E R K+ Q R R+A+GAG
Sbjct: 352 LPGMG-DLTKMMSGMDAEGGARRLVGIIDSMTPQE---RRIPKIIDMQ--RRQRIARGAG 405
Query: 139 VTEKEVKDLISQYTKFAAVVKKMGG 163
V +EV +L+ QY A ++K M G
Sbjct: 406 VQPQEVNELLKQYNTMAPIMKMMAG 430
>gi|448330573|ref|ZP_21519853.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
gi|445611451|gb|ELY65203.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
Length = 464
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 21 ICCMGDIEGLIDKVN----ELKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIM 76
+ MGD+ L ++V + +++ + E + GQFTL DM +Q + + MGP Q+M
Sbjct: 288 LLGMGDLSQLAERVERAMEQTDMEEEDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVM 347
Query: 77 GMIPGFS---QDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTG--RIT 131
MIPG +D L + + + R++ IMDSM + E K + K G +I
Sbjct: 348 DMIPGIGGGIKDQLPEDAMDVTQERMQTFTVIMDSMTEAE-------KEYPKAIGASQIQ 400
Query: 132 RVAQGAGVTEKEVKDLISQYTKFAAVVKKMGGI 164
R+A+G+G E++V++L+ QY +K+ G+
Sbjct: 401 RIARGSGTEEEQVRELLQQYKMMERTMKQFQGM 433
>gi|269793026|ref|YP_003317930.1| signal recognition particle protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100661|gb|ACZ19648.1| signal recognition particle protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 447
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 22/163 (13%)
Query: 21 ICCMGDIEGLIDKVNELKLD-DNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGM- 78
I MGD+ GL+++V + + D E L E IK +FTL DM Q + + KMGP +++ M
Sbjct: 293 ILGMGDVMGLLERVQQATSEEDVERLSESIKRNRFTLEDMLIQLRQVQKMGPLEKVIEML 352
Query: 79 -IPGFSQDFLSKGSEQESMARLKRLMTIMDSMNDGELDNRDGAKLFSKQTGRITRVAQGA 137
IPG S+ + + R+K + I+ SM E N + K R R+AQG+
Sbjct: 353 PIPGVSKALKDANVDPK---RIKHMEAIILSMTPRERRNPEIIK-----GSRRRRIAQGS 404
Query: 138 GVTEKEVKDLISQYTKFAAVVKKMG-----------GIKGLFK 169
G + + V L+ QY + ++K G G+KGLF+
Sbjct: 405 GTSVQMVNQLLHQYEQMKDLMKAFGKGPKRGFKVPPGLKGLFR 447
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,919,296,386
Number of Sequences: 23463169
Number of extensions: 113972154
Number of successful extensions: 392942
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2948
Number of HSP's successfully gapped in prelim test: 1755
Number of HSP's that attempted gapping in prelim test: 385346
Number of HSP's gapped (non-prelim): 4914
length of query: 203
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 68
effective length of database: 9,191,667,552
effective search space: 625033393536
effective search space used: 625033393536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)