Your job contains 1 sequence.
>psy4311
MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI
DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK
LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSLIPT
YEKSFHWNFN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4311
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010747 - symbol:Srp54k "Signal recognition partic... 735 9.6e-73 1
ZFIN|ZDB-GENE-040426-818 - symbol:srp54 "signal recogniti... 707 8.9e-70 1
UNIPROTKB|Q2T9U1 - symbol:SRP54 "Signal recognition parti... 706 1.1e-69 1
UNIPROTKB|P61010 - symbol:SRP54 "Signal recognition parti... 706 1.1e-69 1
UNIPROTKB|P61011 - symbol:SRP54 "Signal recognition parti... 706 1.1e-69 1
UNIPROTKB|F2Z5M9 - symbol:SRP54 "Uncharacterized protein"... 706 1.1e-69 1
UNIPROTKB|Q4R965 - symbol:SRP54 "Signal recognition parti... 706 1.1e-69 1
UNIPROTKB|Q5R4R6 - symbol:SRP54 "Signal recognition parti... 706 1.1e-69 1
RGD|2323636 - symbol:Fam177a1 "family with sequence simil... 703 2.4e-69 1
RGD|621390 - symbol:Srp54 "signal recognition particle 54... 703 2.4e-69 1
UNIPROTKB|E1C6G6 - symbol:SRP54 "Uncharacterized protein"... 699 6.3e-69 1
WB|WBGene00009012 - symbol:F21D5.7 species:6239 "Caenorha... 593 1.1e-57 1
TAIR|locus:2037803 - symbol:ATHSRP54A "signal recognition... 531 4.0e-51 1
TAIR|locus:2028563 - symbol:AT1G48900 species:3702 "Arabi... 523 2.8e-50 1
POMBASE|SPCC188.06c - symbol:srp54 "signal recognition pa... 518 9.5e-50 1
DICTYBASE|DDB_G0275455 - symbol:srp54 "signal recognition... 500 7.7e-48 1
GENEDB_PFALCIPARUM|PF14_0477 - symbol:PF14_0477 "signal r... 444 6.6e-42 1
UNIPROTKB|Q8IKX4 - symbol:PF14_0477 "Signal recognition p... 444 6.6e-42 1
TAIR|locus:2157809 - symbol:AT5G49500 "AT5G49500" species... 442 1.1e-41 1
UNIPROTKB|G3V4F7 - symbol:SRP54 "Signal recognition parti... 438 2.8e-41 1
SGD|S000006292 - symbol:SRP54 "Signal recognition particl... 416 6.1e-39 1
UNIPROTKB|G3V480 - symbol:SRP54 "Signal recognition parti... 314 3.9e-28 1
CGD|CAL0003314 - symbol:SRP54 species:5476 "Candida albic... 252 9.4e-21 1
TIGR_CMR|CHY_1434 - symbol:CHY_1434 "signal recognition p... 235 3.5e-19 1
TAIR|locus:2158103 - symbol:AT5G66970 species:3702 "Arabi... 214 1.6e-17 1
TIGR_CMR|GSU_0642 - symbol:GSU_0642 "signal recognition p... 211 1.6e-16 1
UNIPROTKB|O07347 - symbol:ffh "Signal recognition particl... 210 1.8e-16 1
TAIR|locus:2150620 - symbol:CPSRP54 "chloroplast signal r... 212 2.1e-16 1
UNIPROTKB|G3V346 - symbol:SRP54 "Signal recognition parti... 196 1.3e-15 1
TIGR_CMR|NSE_0540 - symbol:NSE_0540 "signal recognition p... 200 2.5e-15 1
TIGR_CMR|APH_0349 - symbol:APH_0349 "signal recognition p... 195 8.8e-15 1
TIGR_CMR|BA_3983 - symbol:BA_3983 "signal recognition par... 194 1.1e-14 1
TIGR_CMR|NSE_0545 - symbol:NSE_0545 "signal recognition p... 186 2.4e-14 1
TIGR_CMR|SO_1356 - symbol:SO_1356 "signal recognition par... 191 2.5e-14 1
TIGR_CMR|CBU_0450 - symbol:CBU_0450 "signal recognition p... 190 3.3e-14 1
UNIPROTKB|P66844 - symbol:ffh "Signal recognition particl... 191 3.4e-14 1
UNIPROTKB|G3V3L9 - symbol:SRP54 "Signal recognition parti... 182 3.8e-14 1
UNIPROTKB|Q97QD2 - symbol:ffh "Signal recognition particl... 188 7.1e-14 1
TIGR_CMR|CPS_4073 - symbol:CPS_4073 "signal recognition p... 182 2.5e-13 1
TIGR_CMR|ECH_0475 - symbol:ECH_0475 "signal recognition p... 181 3.0e-13 1
NCBI_NP|NP_355632.2 - symbol:ffh "signal recognition part... 180 5.2e-13 1
TIGR_CMR|CBU_1903 - symbol:CBU_1903 "signal recognition p... 173 9.2e-13 1
UNIPROTKB|P0AGD7 - symbol:ffh species:83333 "Escherichia ... 172 2.9e-12 1
TIGR_CMR|CHY_1442 - symbol:CHY_1442 "signal recognition p... 166 4.4e-12 1
TAIR|locus:2118701 - symbol:AT4G30600 species:3702 "Arabi... 168 1.4e-11 1
ASPGD|ASPL0000006202 - symbol:AN6627 species:162425 "Emer... 154 1.9e-11 2
SGD|S000002700 - symbol:SRP101 "Signal recognition partic... 166 2.2e-11 1
TIGR_CMR|SPO_1339 - symbol:SPO_1339 "signal recognition p... 162 2.6e-11 1
TIGR_CMR|VC_0560 - symbol:VC_0560 "signal recognition par... 161 4.7e-11 1
TIGR_CMR|SPO_3246 - symbol:SPO_3246 "signal recognition p... 160 7.2e-11 1
TIGR_CMR|ECH_1111 - symbol:ECH_1111 "signal recognition p... 151 2.3e-10 1
UNIPROTKB|Q97QH0 - symbol:ftsY "Signal recognition partic... 154 2.3e-10 1
TIGR_CMR|CJE_1340 - symbol:CJE_1340 "signal recognition p... 150 2.4e-10 1
UNIPROTKB|P83749 - symbol:ftsY "Signal recognition partic... 146 7.9e-10 1
TIGR_CMR|CJE_0809 - symbol:CJE_0809 "signal recognition p... 149 8.7e-10 1
POMBASE|SPBC3B9.03 - symbol:SPBC3B9.03 "signal recognitio... 146 2.6e-09 1
TIGR_CMR|GSU_1132 - symbol:GSU_1132 "signal recognition p... 142 3.1e-09 1
TIGR_CMR|BA_3985 - symbol:BA_3985 "signal recognition par... 139 5.8e-09 1
TIGR_CMR|VC_0147 - symbol:VC_0147 "signal recognition par... 139 8.3e-09 1
TIGR_CMR|APH_1227 - symbol:APH_1227 "signal recognition p... 134 8.7e-09 2
TIGR_CMR|CPS_0157 - symbol:CPS_0157 "signal recognition p... 139 1.2e-08 1
CGD|CAL0003010 - symbol:orf19.3952 species:5476 "Candida ... 139 1.4e-08 1
FB|FBgn0010391 - symbol:Gtp-bp "GTP-binding protein" spec... 139 1.8e-08 1
UNIPROTKB|P66842 - symbol:ftsY "Signal recognition partic... 138 2.5e-08 1
TIGR_CMR|SO_4586 - symbol:SO_4586 "signal recognition par... 138 3.4e-08 1
DICTYBASE|DDB_G0277377 - symbol:srpR "signal recognition ... 137 1.2e-07 1
UNIPROTKB|P10121 - symbol:ftsY "SRP receptor" species:833... 134 3.5e-07 1
WB|WBGene00009521 - symbol:F38A1.8 species:6239 "Caenorha... 133 7.1e-07 1
MGI|MGI:1914648 - symbol:Srpr "signal recognition particl... 132 1.1e-06 1
RGD|1311504 - symbol:Srpr "signal recognition particle re... 132 1.1e-06 1
UNIPROTKB|P08240 - symbol:SRPR "Signal recognition partic... 132 1.1e-06 1
UNIPROTKB|Q3V8C7 - symbol:flhF "Flagellar biogenesis prot... 129 2.0e-06 1
TIGR_CMR|GSU_3055 - symbol:GSU_3055 "flagellar biosynthet... 129 2.0e-06 1
UNIPROTKB|J9NTJ9 - symbol:SRPR "Signal recognition partic... 129 3.3e-06 1
UNIPROTKB|F1PLH3 - symbol:SRPR "Signal recognition partic... 129 3.3e-06 1
UNIPROTKB|F1S754 - symbol:SRPR "Uncharacterized protein" ... 129 3.3e-06 1
ZFIN|ZDB-GENE-030219-11 - symbol:srpr "signal recognition... 129 3.4e-06 1
UNIPROTKB|F1MNJ2 - symbol:SRPR "Signal recognition partic... 128 4.1e-06 1
UNIPROTKB|J9P788 - symbol:SRPR "Signal recognition partic... 129 4.2e-06 1
UNIPROTKB|Q3MHE8 - symbol:SRPR "Signal recognition partic... 128 4.5e-06 1
TIGR_CMR|CJE_0061 - symbol:CJE_0061 "flagellar biosynthet... 124 5.9e-06 2
UNIPROTKB|F1NXV4 - symbol:SRPR "Uncharacterized protein" ... 127 6.2e-06 1
UNIPROTKB|P06625 - symbol:SRPR "Signal recognition partic... 121 3.9e-05 1
UNIPROTKB|Q722L6 - symbol:LMOf2365_0717 "Putative flagell... 109 0.00068 1
>FB|FBgn0010747 [details] [associations]
symbol:Srp54k "Signal recognition particle protein 54k"
species:7227 "Drosophila melanogaster" [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0005048 "signal sequence binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0005048
GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 HSSP:P70722 EMBL:AY094660
ProteinModelPortal:Q8T3P8 SMR:Q8T3P8 STRING:Q8T3P8 PaxDb:Q8T3P8
PRIDE:Q8T3P8 FlyBase:FBgn0010747 InParanoid:Q8T3P8
OrthoDB:EOG44TMQ3 ChiTaRS:Srp54k ArrayExpress:Q8T3P8 Bgee:Q8T3P8
Uniprot:Q8T3P8
Length = 569
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 142/162 (87%), Positives = 153/162 (94%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKIT+AL SLS ATVINEE LNSMLKEICAALLEADVNI+LVK+LRENVR VI
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
DFDEMA GLNKRRMIQS+V+KEL+KLVDPGVK +QP KGK NV+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAYHY K+NWK+CLVCADTFRAGAYDQ+KQNATKARIPFYGS
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGS 162
>ZFIN|ZDB-GENE-040426-818 [details] [associations]
symbol:srp54 "signal recognition particle 54"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 ZFIN:ZDB-GENE-040426-818 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 GO:GO:0048500 HSSP:P70722 EMBL:BX088587
EMBL:BC045474 EMBL:BC067588 IPI:IPI00483938 RefSeq:NP_957282.1
UniGene:Dr.7990 SMR:Q7ZVN5 STRING:Q7ZVN5 Ensembl:ENSDART00000018678
Ensembl:ENSDART00000133424 GeneID:393963 KEGG:dre:393963
InParanoid:Q7ZVN5 NextBio:20814934 Uniprot:Q7ZVN5
Length = 504
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 136/162 (83%), Positives = 151/162 (93%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+CAALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKRRMIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY++ +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>UNIPROTKB|Q2T9U1 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9913 "Bos taurus" [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0008312 "7S RNA binding" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] [GO:0030942 "endoplasmic reticulum signal
peptide binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 EMBL:BC111270
IPI:IPI00698247 RefSeq:NP_001033290.1 UniGene:Bt.36654 HSSP:Q6MTB9
ProteinModelPortal:Q2T9U1 SMR:Q2T9U1 STRING:Q2T9U1 PRIDE:Q2T9U1
Ensembl:ENSBTAT00000025405 GeneID:614017 KEGG:bta:614017 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 InParanoid:Q2T9U1
OMA:GQQVVKI OrthoDB:EOG45MN54 NextBio:20898897 Uniprot:Q2T9U1
Length = 504
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 135/162 (83%), Positives = 150/162 (92%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY+Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>UNIPROTKB|P61010 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0005829 "cytosol"
evidence=TAS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=ISS;IMP] [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS;IMP] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0008144 "drug binding"
evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006616 "SRP-dependent
cotranslational protein targeting to membrane, translocation"
evidence=IDA] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=IMP]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0006616 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 Reactome:REACT_146484
GO:GO:0030942 PDB:2J37 PDBsum:2J37 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 EMBL:X16318 PIR:S05197 RefSeq:NP_001003272.1
UniGene:Cfa.3810 PDB:2GO5 PDBsum:2GO5 ProteinModelPortal:P61010
SMR:P61010 STRING:P61010 PRIDE:P61010 Ensembl:ENSCAFT00000021158
GeneID:403953 KEGG:cfa:403953 InParanoid:P61010
EvolutionaryTrace:P61010 NextBio:20817443 Uniprot:P61010
Length = 504
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 135/162 (83%), Positives = 150/162 (92%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY+Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>UNIPROTKB|P61011 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008144 "drug
binding" evidence=IDA] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IDA] [GO:0008312 "7S RNA binding" evidence=IDA]
[GO:0006616 "SRP-dependent cotranslational protein targeting to
membrane, translocation" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IDA]
[GO:0042493 "response to drug" evidence=IDA] [GO:0045047 "protein
targeting to ER" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC;TAS] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_17015 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005829 GO:GO:0005730
GO:GO:0042493 GO:GO:0006412 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0043021 GO:GO:0019003
TCDB:3.A.5.9.1 GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0006616
GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0030942 PDB:1MFQ PDBsum:1MFQ CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI OrthoDB:EOG45MN54 EMBL:X86373 EMBL:U51920 EMBL:AK300824
EMBL:AK312853 EMBL:AL049776 EMBL:BC000652 EMBL:BC003389
IPI:IPI00009822 IPI:IPI00929464 PIR:S54143 RefSeq:NP_001139754.1
RefSeq:NP_003127.1 UniGene:Hs.167535 PDB:1QB2 PDBsum:1QB2
ProteinModelPortal:P61011 SMR:P61011 IntAct:P61011 STRING:P61011
PhosphoSite:P61011 DMDM:46577650 PaxDb:P61011 PRIDE:P61011
DNASU:6729 Ensembl:ENST00000216774 Ensembl:ENST00000546080
Ensembl:ENST00000556994 GeneID:6729 KEGG:hsa:6729 UCSC:uc001wso.3
GeneCards:GC14P035452 HGNC:HGNC:11301 HPA:HPA048977 MIM:604857
neXtProt:NX_P61011 PharmGKB:PA36125 InParanoid:P61011
PhylomeDB:P61011 ChiTaRS:SRP54 EvolutionaryTrace:P61011
GenomeRNAi:6729 NextBio:26248 ArrayExpress:P61011 Bgee:P61011
CleanEx:HS_SRP54 Genevestigator:P61011 GermOnline:ENSG00000100883
Uniprot:P61011
Length = 504
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 135/162 (83%), Positives = 150/162 (92%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY+Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>UNIPROTKB|F2Z5M9 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008144
"drug binding" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:CU469145
RefSeq:XP_001927834.3 ProteinModelPortal:F2Z5M9 SMR:F2Z5M9
PRIDE:F2Z5M9 Ensembl:ENSSSCT00000002187 GeneID:100154361
KEGG:ssc:100154361 Uniprot:F2Z5M9
Length = 504
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 135/162 (83%), Positives = 150/162 (92%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY+Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>UNIPROTKB|Q4R965 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9541 "Macaca fascicularis" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0008144 "drug binding" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=ISS] [GO:0042493 "response to drug" evidence=ISS]
[GO:0045047 "protein targeting to ER" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005634 GO:GO:0042493
GO:GO:0016607 GO:GO:0008144 GO:GO:0003924 GO:GO:0006184
GO:GO:0019003 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0045047 GO:GO:0005786 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 HOVERGEN:HBG061072 EMBL:AB168231
ProteinModelPortal:Q4R965 SMR:Q4R965 PRIDE:Q4R965 Uniprot:Q4R965
Length = 504
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 135/162 (83%), Positives = 150/162 (92%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY+Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>UNIPROTKB|Q5R4R6 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9601 "Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS] [GO:0008144 "drug
binding" evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0030942 "endoplasmic
reticulum signal peptide binding" evidence=ISS] [GO:0042493
"response to drug" evidence=ISS] [GO:0045047 "protein targeting to
ER" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 HOVERGEN:HBG061072 EMBL:CR861178 RefSeq:NP_001126912.1
UniGene:Pab.3814 ProteinModelPortal:Q5R4R6 SMR:Q5R4R6 PRIDE:Q5R4R6
GeneID:100173929 KEGG:pon:100173929 InParanoid:Q5R4R6
Uniprot:Q5R4R6
Length = 504
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 135/162 (83%), Positives = 150/162 (92%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY+Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>RGD|2323636 [details] [associations]
symbol:Fam177a1 "family with sequence similarity 177, member A1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:2323636 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
IPI:IPI00387699 PRIDE:F1M7P5 Ensembl:ENSRNOT00000052076
ArrayExpress:F1M7P5 Uniprot:F1M7P5
Length = 500
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 135/162 (83%), Positives = 149/162 (91%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>RGD|621390 [details] [associations]
symbol:Srp54 "signal recognition particle 54A" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003924 "GTPase activity" evidence=IEA;ISO] [GO:0005525 "GTP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA;ISO] [GO:0006184 "GTP catabolic
process" evidence=ISO] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0008144 "drug
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008312 "7S RNA binding" evidence=IEA;ISO]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA;ISO] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEA;ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA;ISO] [GO:0045047 "protein targeting to ER"
evidence=ISO] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:621390 GO:GO:0005525 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI EMBL:BC079117 IPI:IPI00391089 RefSeq:NP_446323.1
UniGene:Rn.24880 ProteinModelPortal:Q6AYB5 SMR:Q6AYB5 STRING:Q6AYB5
PRIDE:Q6AYB5 Ensembl:ENSRNOT00000049937 GeneID:116650
KEGG:rno:116650 UCSC:RGD:621390 InParanoid:Q6AYB5 NextBio:619403
ArrayExpress:Q6AYB5 Genevestigator:Q6AYB5
GermOnline:ENSRNOG00000032776 Uniprot:Q6AYB5
Length = 504
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 135/162 (83%), Positives = 149/162 (91%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>UNIPROTKB|E1C6G6 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0030942
"endoplasmic reticulum signal peptide binding" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0008144 GO:GO:0003924
GO:GO:0043021 GO:GO:0019003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729
GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:AADN02003392
IPI:IPI00581279 RefSeq:XP_421238.1 ProteinModelPortal:E1C6G6
PRIDE:E1C6G6 Ensembl:ENSGALT00000016327 GeneID:423322
KEGG:gga:423322 NextBio:20825811 Uniprot:E1C6G6
Length = 504
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 133/162 (82%), Positives = 149/162 (91%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D +EMASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK N+IMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LAY Y +K WK CL+CADT+RAGA+DQLKQNATKARIPFYGS
Sbjct: 121 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGS 162
>WB|WBGene00009012 [details] [associations]
symbol:F21D5.7 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008312 "7S
RNA binding" evidence=IEA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0006915 GO:GO:0002119 GO:GO:0003924
GO:GO:0006184 GO:GO:0000003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 EMBL:Z68161 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
OMA:GQQVVKI GO:GO:0048500 EMBL:Z54271 PIR:A88763 PIR:T21140
RefSeq:NP_501507.1 HSSP:P70722 ProteinModelPortal:G5EE80 SMR:G5EE80
EnsemblMetazoa:F21D5.7.1 EnsemblMetazoa:F21D5.7.2 GeneID:259584
KEGG:cel:CELE_F21D5.7 CTD:259584 WormBase:F21D5.7 NextBio:952170
Uniprot:G5EE80
Length = 496
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 110/162 (67%), Positives = 136/162 (83%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKI +A+ L +TVINE L+ MLKE+C AL+E+DV+I+LVK+L++NV++ I
Sbjct: 1 MVLADLGRKIRNAIGKLGQSTVINEGELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
+F+E+ G NKRR IQ +V+ EL+KLVDPGV P KG+ NV MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTPFTPTKGRRNVFMFVGLQGSGKTTTCTK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
+AY+Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 162
>TAIR|locus:2037803 [details] [associations]
symbol:ATHSRP54A "signal recognition particle 54 kDa
subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0051607
"defense response to virus" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003924 GO:GO:0006184 EMBL:AC007591 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 EMBL:L19997
EMBL:AF344329 EMBL:AY086187 IPI:IPI00526094 PIR:S42550
RefSeq:NP_563970.1 UniGene:At.24597 ProteinModelPortal:P37106
SMR:P37106 DIP:DIP-59002N STRING:P37106 PaxDb:P37106 PRIDE:P37106
EnsemblPlants:AT1G15310.1 GeneID:838100 KEGG:ath:AT1G15310
TAIR:At1g15310 eggNOG:COG0541 HOGENOM:HOG000036165
InParanoid:P37106 KO:K03106 OMA:KVIPPQM PhylomeDB:P37106
ProtClustDB:CLSN2686827 Genevestigator:P37106 GermOnline:AT1G15310
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
Uniprot:P37106
Length = 479
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 95/162 (58%), Positives = 136/162 (83%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLA+LG +IT A++ ++N T+I+E+VLN L EI ALL++DV+ LV+K++ N+++++
Sbjct: 1 MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
+ D++A+G NKR +I+ +++KEL +++DPG A P+K KP+V+MFVGLQG+GKTTTCTK
Sbjct: 61 NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
AY++ KK +KA LVCADTFRAGA+DQLKQNATKA+IPFYGS
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGS 162
>TAIR|locus:2028563 [details] [associations]
symbol:AT1G48900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0003924 GO:GO:0006184 EMBL:AC084414 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 ProtClustDB:CLSN2686827
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 EMBL:U12127
EMBL:AY054273 EMBL:AY052331 EMBL:AF446864 IPI:IPI00531486
PIR:G96526 RefSeq:NP_564535.1 UniGene:At.23838
ProteinModelPortal:P49967 SMR:P49967 STRING:P49967 PaxDb:P49967
PRIDE:P49967 EnsemblPlants:AT1G48900.1 GeneID:841312
KEGG:ath:AT1G48900 GeneFarm:1889 TAIR:At1g48900 InParanoid:P49967
OMA:NVQHMSK PhylomeDB:P49967 Genevestigator:P49967
GermOnline:AT1G48900 Uniprot:P49967
Length = 495
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 96/183 (52%), Positives = 144/183 (78%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLA+LG +IT A++ +SN T+I+E+ LN L EI ALL++DV+ LVK+++ N+++++
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
+ +++A+G NKRR+I+ +++ EL K++DPG A P+K K +V+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSLIPT 180
AY++ KK +K LVCADTFRAGA+DQLKQNATKA+IPFYGS + +P+ + + + T
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYT-ESDPV-KIAVEGVDT 178
Query: 181 YEK 183
++K
Sbjct: 179 FKK 181
>POMBASE|SPCC188.06c [details] [associations]
symbol:srp54 "signal recognition particle subunit Srp54"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IMP] [GO:0008312 "7S RNA binding" evidence=IMP]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPCC188.06c
GO:GO:0005525 GO:GO:0005783 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003924 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
OMA:GQQVVKI EMBL:X51613 EMBL:M55518 PIR:A33644 RefSeq:NP_588209.1
ProteinModelPortal:P21565 MINT:MINT-4687605 STRING:P21565
PRIDE:P21565 EnsemblFungi:SPCC188.06c.1 GeneID:2539290
KEGG:spo:SPCC188.06c OrthoDB:EOG4TMV9N NextBio:20800457
Uniprot:P21565
Length = 522
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 95/162 (58%), Positives = 129/162 (79%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MV ADLGR++ SAL S AT +NEE+++++LK IC ALLE DVN++LV++LR N+++ I
Sbjct: 1 MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
+ + G+N +R++Q +V+ EL LVDP V A P+KG+P+VIM VGLQGSGKTTTC+K
Sbjct: 61 NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
LA HY ++ K+CLV ADTFRAGA+DQLKQNA KAR+P++GS
Sbjct: 121 LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGS 162
>DICTYBASE|DDB_G0275455 [details] [associations]
symbol:srp54 "signal recognition particle 54 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 dictyBase:DDB_G0275455 GO:GO:0005525 GO:GO:0045335
GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 OMA:GQQVVKI RefSeq:XP_643640.1
HSSP:P61011 ProteinModelPortal:Q75K18 STRING:Q75K18
EnsemblProtists:DDB0232373 GeneID:8620227 KEGG:ddi:DDB_G0275455
Uniprot:Q75K18
Length = 542
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 92/170 (54%), Positives = 134/170 (78%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLG +++SALRSL+ T++NE+ +N +LKE+ AL ++DV++ L+ ++R+N++ I
Sbjct: 1 MVLADLGNQLSSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
D+MA+GLNKR++I+ V+ ELI+L+DPGV +P KGK N++MFVGLQG+GKTT+ TK
Sbjct: 61 KLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPI 170
LAY Y KK + +VCADTFRAGA+DQ++ NA KA+I +YGS K +P+
Sbjct: 121 LAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEK-DPV 169
>GENEDB_PFALCIPARUM|PF14_0477 [details] [associations]
symbol:PF14_0477 "signal recognition particle
54 kDa protein, putative" species:5833 "Plasmodium falciparum"
[GO:0005048 "signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 85/162 (52%), Positives = 119/162 (73%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVL +LG +IT+A R L +T+ ++ V+ LKEI AL+ +D+N+ +K ++ N++ I
Sbjct: 1 MVLTELGTQITNAFRKLQTSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
+ + G NK++++Q V +ELIKL++ + + P KGK NVI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDIYGNNKKKLVQKYVVEELIKLLEGKKEGYNPVKGKRNVILFVGLQGSGKTTTCTK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
A++Y KK +K LVCADTFRAGA+DQLKQNA K +IPFYGS
Sbjct: 121 YAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGS 162
>UNIPROTKB|Q8IKX4 [details] [associations]
symbol:PF14_0477 "Signal recognition particle SRP54,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005048
"signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 85/162 (52%), Positives = 119/162 (73%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVL +LG +IT+A R L +T+ ++ V+ LKEI AL+ +D+N+ +K ++ N++ I
Sbjct: 1 MVLTELGTQITNAFRKLQTSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNI 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
+ + G NK++++Q V +ELIKL++ + + P KGK NVI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDIYGNNKKKLVQKYVVEELIKLLEGKKEGYNPVKGKRNVILFVGLQGSGKTTTCTK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
A++Y KK +K LVCADTFRAGA+DQLKQNA K +IPFYGS
Sbjct: 121 YAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGS 162
>TAIR|locus:2157809 [details] [associations]
symbol:AT5G49500 "AT5G49500" species:3702 "Arabidopsis
thaliana" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005525 "GTP
binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=IEA;ISS] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003924 GO:GO:0006184 EMBL:AB023033
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106
ProtClustDB:CLSN2686827 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 EMBL:U12126 IPI:IPI00534798 RefSeq:NP_199761.1
UniGene:At.29781 ProteinModelPortal:P49966 SMR:P49966 IntAct:P49966
STRING:P49966 PRIDE:P49966 GeneID:835010 KEGG:ath:AT5G49500
TAIR:At5g49500 InParanoid:P49966 Genevestigator:P49966
GermOnline:AT5G49500 Uniprot:P49966
Length = 497
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 83/172 (48%), Positives = 127/172 (73%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLA+LG +I SA++ ++N T+I+E+ LN L EI ALL++DV+ LVK+++ N+++++
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGS--GKTTTC 118
+ +++A+G NKRR+I+ +++ EL K++DPG A P+K KP+V+MFVGLQG K
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120
Query: 119 TKLAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPI 170
+ +K +K LVCADTFRAGA+DQLKQNATK++IP+YGS G +P+
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGS-DPV 171
>UNIPROTKB|G3V4F7 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 Pfam:PF00448 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0048500 EMBL:AL049776
HGNC:HGNC:11301 ChiTaRS:SRP54 ProteinModelPortal:G3V4F7 SMR:G3V4F7
Ensembl:ENST00000555557 ArrayExpress:G3V4F7 Bgee:G3V4F7
Uniprot:G3V4F7
Length = 440
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 81/98 (82%), Positives = 90/98 (91%)
Query: 65 MASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
MASGLNKR+MIQ +V+KEL+KLVDPGVKA P KGK NVIMFVGLQGSGKTTTC+KLAY+
Sbjct: 1 MASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYY 60
Query: 125 YLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
Y +K WK CL+CADTFRAGA+DQLKQNATKARIPFYGS
Sbjct: 61 YQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGS 98
>SGD|S000006292 [details] [associations]
symbol:SRP54 "Signal recognition particle (SRP) subunit
(homolog of mammalian SRP54)" species:4932 "Saccharomyces
cerevisiae" [GO:0008312 "7S RNA binding" evidence=IEA;IDA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA;IMP] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=IC;ISA] [GO:0005525 "GTP binding"
evidence=IEA;ISA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005048 "signal sequence binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0045047
"protein targeting to ER" evidence=IPI] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA;IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 SGD:S000006292
GO:GO:0005525 GO:GO:0005096 GO:GO:0043547 GO:GO:0003924
GO:GO:0006184 EMBL:BK006949 EMBL:U51033 GO:GO:0005048 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824 OrthoDB:EOG4TMV9N
EMBL:X16908 EMBL:M55517 EMBL:X51614 PIR:S69073 RefSeq:NP_015413.1
ProteinModelPortal:P20424 SMR:P20424 DIP:DIP-2943N IntAct:P20424
MINT:MINT-484768 STRING:P20424 PaxDb:P20424 PeptideAtlas:P20424
EnsemblFungi:YPR088C GeneID:856203 KEGG:sce:YPR088C CYGD:YPR088c
OMA:TAGRHKE NextBio:981405 Genevestigator:P20424 GermOnline:YPR088C
Uniprot:P20424
Length = 541
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 94/170 (55%), Positives = 121/170 (71%)
Query: 1 MVLADLGRKITSALRS-LSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVR-Q 58
MVLADLG++I SA+ + +SN ++ MLK I ALLE+DVNI LV KLR N+R Q
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 59 VID---FDEMASGLNKRRMIQSSVYKELIKLVD-PGV--KAHQPQKGKPNVIMFVGLQGS 112
++ ++ + +++IQ +V+ EL KLV G KA P+K K N+IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKLAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
GKTT+CTKLA +Y K+ +K LVCADTFRAGA+DQLKQNA +ARIPFYGS
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGS 170
>UNIPROTKB|G3V480 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR013822 Pfam:PF02881
SMART:SM00963 GO:GO:0005525 GO:GO:0006614 SUPFAM:SSF47364
EMBL:AL049776 HGNC:HGNC:11301 ChiTaRS:SRP54
ProteinModelPortal:G3V480 SMR:G3V480 Ensembl:ENST00000555746
ArrayExpress:G3V480 Bgee:G3V480 Uniprot:G3V480
Length = 74
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 63/74 (85%), Positives = 70/74 (94%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADVNIKLVK+LRENV+ I
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 DFDEMASGLNKRRM 74
D +EMASGLNKR+M
Sbjct: 61 DLEEMASGLNKRKM 74
>CGD|CAL0003314 [details] [associations]
symbol:SRP54 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005048
"signal sequence binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
CGD:CAL0003314 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AACQ01000049 EMBL:AACQ01000048 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0048500 RefSeq:XP_717868.1
RefSeq:XP_717934.1 ProteinModelPortal:Q5A885 STRING:Q5A885
GeneID:3640377 GeneID:3640507 KEGG:cal:CaO19.10753
KEGG:cal:CaO19.3243 Uniprot:Q5A885
Length = 556
Score = 252 (93.8 bits), Expect = 9.4e-21, P = 9.4e-21
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 53 RENVRQVIDFDEMASGLNKRRMIQSSVYKEL---IKLVDPGVKAHQPQKGKPNVIMFVGL 109
R+ ++++I FDE+ + ++ ++ K+L K ++ G K K +VIMFVGL
Sbjct: 72 RKKLQKII-FDELCALVDSN--VEPPKPKKLSTSTKTIN-GKKVRL-SKESSHVIMFVGL 126
Query: 110 QGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGS 162
QG+GKTT+CTKLA +Y K+ +K LVCADTFRAGA+DQLKQNA KA IP+YGS
Sbjct: 127 QGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYYGS 179
Score = 203 (76.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 43/101 (42%), Positives = 68/101 (67%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MVLADLG ++ AL S+ + + ++ + M+K+IC+ALLE+DVN+KLV KLR N++ I
Sbjct: 1 MVLADLGSRLRGALSSVESGS---DDEIQQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 DFDEMA---SGLNKRRMIQSSVYKELIKLVDPGVKAHQPQK 98
D ++ S +NKR+ +Q ++ EL LVD V+ +P+K
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKK 98
>TIGR_CMR|CHY_1434 [details] [associations]
symbol:CHY_1434 "signal recognition particle protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005048 "signal
sequence binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI RefSeq:YP_360266.1
ProteinModelPortal:Q3AC68 SMR:Q3AC68 STRING:Q3AC68 GeneID:3728502
KEGG:chy:CHY_1434 PATRIC:21275999
BioCyc:CHYD246194:GJCN-1433-MONOMER Uniprot:Q3AC68
Length = 446
Score = 235 (87.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 60/171 (35%), Positives = 89/171 (52%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
MV +L K+ + L + EE +N L+E+ ALLEADVN ++VK V++
Sbjct: 1 MVFENLSNKLQEVFKKLKGKGRLTEEDVNLALREVRIALLEADVNFQVVKDFIAKVKEKA 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKP-NVIMFVGLQGSGKTTTCT 119
E+ L + + V++ELI L+ A G P +IM VGLQG+GKTTT
Sbjct: 61 VGHEVLESLTPGQQVIKIVHEELINLMGK-TNAKLNDAGSPPTIIMLVGLQGAGKTTTAA 119
Query: 120 KLAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPI 170
KLAY K+ K LV AD +R A QL+ +P + + G+++P+
Sbjct: 120 KLAYLLKKQGKKPLLVAADVYRPAAIKQLQVLGDTIDVPVF--TMGEQSPV 168
>TAIR|locus:2158103 [details] [associations]
symbol:AT5G66970 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR013822
Pfam:PF00448 GO:GO:0005525 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006614 SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106
EMBL:DQ447113 IPI:IPI00530911 RefSeq:NP_201498.2 UniGene:At.55720
ProteinModelPortal:Q1PDF5 SMR:Q1PDF5 STRING:Q1PDF5
EnsemblPlants:AT5G66970.1 GeneID:836831 KEGG:ath:AT5G66970
TAIR:At5g66970 HOGENOM:HOG000124785 InParanoid:Q1PDF5 OMA:YARYHRK
PhylomeDB:Q1PDF5 ProtClustDB:CLSN2702272 ArrayExpress:Q1PDF5
Genevestigator:Q1PDF5 Uniprot:Q1PDF5
Length = 175
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 51/160 (31%), Positives = 87/160 (54%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
M L ++ +I + ++ + ++ L S L EI ALL+AD+ V ++ ++I
Sbjct: 1 MALEEVRGRIGRSFEEMNKTSNMDCTKLKSCLNEITCALLDADIPRLAVDEIETKSLEII 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
+ + K +I + +EL +DPG A K +P+++MF+GL+G KT TC K
Sbjct: 61 NLPKAPK--KKGALIYMMMLQELSSKLDPGKSALIRGKLEPSIVMFIGLRGVDKTKTCAK 118
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFY 160
A ++ KK ++ LVCADTF+ A+ +L + A K +P Y
Sbjct: 119 YARYHRKKGFRPALVCADTFKFDAFVRLNK-AAKDEVPVY 157
>TIGR_CMR|GSU_0642 [details] [associations]
symbol:GSU_0642 "signal recognition particle protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867
RefSeq:NP_951699.1 ProteinModelPortal:Q74FG7 GeneID:2685362
KEGG:gsu:GSU0642 PATRIC:22024031 BioCyc:GSUL243231:GH27-644-MONOMER
Uniprot:Q74FG7
Length = 452
Score = 211 (79.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 57/170 (33%), Positives = 87/170 (51%)
Query: 2 VLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVID 61
+L +L K+ + L V++EE + L+E+ LLEADVN K+VK E VR
Sbjct: 1 MLENLSDKLDVLFKKLRGQGVMSEENIKEALREVRLVLLEADVNFKVVKDFVERVRVRAV 60
Query: 62 FDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNV-IMFVGLQGSGKTTTCTK 120
++ L + + V +EL+ L+ G KP V IM VGLQG+GKTT+C K
Sbjct: 61 GTQVLQSLTPGQQVIKIVQEELVALMGGGEDNSLDLAAKPPVPIMMVGLQGAGKTTSCGK 120
Query: 121 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPI 170
LA + + LV AD +R A +QLK + + + S+ ++P+
Sbjct: 121 LARLLKGQRRRPLLVPADVYRPAAIEQLKTLGRQLSVEVF-DSRADQDPV 169
>UNIPROTKB|O07347 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2J7P
PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW PDBsum:2J7P
PDBsum:2XKV PDB:1RY1 PDBsum:1RY1 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
EMBL:U82109 PDB:1FFH PDB:1JPJ PDB:1JPN PDB:1LS1 PDB:1NG1 PDB:1O87
PDB:2C03 PDB:2C04 PDB:2FFH PDB:2IY3 PDB:2J45 PDB:2J46 PDB:2NG1
PDB:3NG1 PDBsum:1FFH PDBsum:1JPJ PDBsum:1JPN PDBsum:1LS1
PDBsum:1NG1 PDBsum:1O87 PDBsum:2C03 PDBsum:2C04 PDBsum:2FFH
PDBsum:2IY3 PDBsum:2J45 PDBsum:2J46 PDBsum:2NG1 PDBsum:3NG1
ProteinModelPortal:O07347 SMR:O07347 IntAct:O07347
EvolutionaryTrace:O07347 Uniprot:O07347
Length = 430
Score = 210 (79.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 55/153 (35%), Positives = 82/153 (53%)
Query: 6 LGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEM 65
L ++ A+ L I EE L + L+EI AL++ADVN+++ + E VR+ ++
Sbjct: 5 LSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQV 64
Query: 66 ASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHY 125
L +I ++VY+ L + + G +A P N+ VGLQGSGKTTT KLA +Y
Sbjct: 65 LESLTPAEVILATVYEALKEAL--GGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYY 122
Query: 126 LKKNWKACLVCADTFRAGAYDQLKQNATKARIP 158
K + LV ADT R A +QL+ K +P
Sbjct: 123 KGKGRRPLLVAADTQRPAAREQLRLLGEKVGVP 155
>TAIR|locus:2150620 [details] [associations]
symbol:CPSRP54 "chloroplast signal recognition particle
54 kDa subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005048 "signal sequence binding" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006617 "SRP-dependent cotranslational protein targeting to
membrane, signal sequence recognition" evidence=ISS] [GO:0008312
"7S RNA binding" evidence=IEA;ISS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0045038 "protein import into chloroplast
thylakoid membrane" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080085 "signal recognition particle, chloroplast targeting"
evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0003924
GO:GO:0006184 EMBL:AL162873 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 PDB:2HUG PDB:3UI2 PDBsum:2HUG
PDBsum:3UI2 TCDB:3.A.5.1.2 GO:GO:0080085 eggNOG:COG0541 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 EMBL:Z21970 EMBL:AF092168
EMBL:AY050999 EMBL:BT000976 IPI:IPI00538977 PIR:S36637
RefSeq:NP_196014.1 UniGene:At.435 ProteinModelPortal:P37107
SMR:P37107 DIP:DIP-752N IntAct:P37107 MINT:MINT-126488
STRING:P37107 PaxDb:P37107 PRIDE:P37107 ProMEX:P37107
EnsemblPlants:AT5G03940.1 GeneID:830273 KEGG:ath:AT5G03940
GeneFarm:1888 TAIR:At5g03940 HOGENOM:HOG000036164 InParanoid:P37107
OMA:DSGKTEQ PhylomeDB:P37107 ProtClustDB:CLSN2686225
EvolutionaryTrace:P37107 Genevestigator:P37107 GermOnline:AT5G03940
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 Uniprot:P37107
Length = 564
Score = 212 (79.7 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 53/153 (34%), Positives = 83/153 (54%)
Query: 10 ITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVR-QVIDFDEMASG 68
+ +A L V+ ++ + +++I ALLEADV++ +V++ ++V Q + + G
Sbjct: 85 LEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGMG-VIRG 143
Query: 69 LNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYLKK 128
+ + + V+ EL+KL+ V Q K P VI+ GLQG GKTT C KLA YLKK
Sbjct: 144 VKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLAC-YLKK 202
Query: 129 NWKAC-LVCADTFRAGAYDQLKQNATKARIPFY 160
K+C L+ D +R A DQL + +P Y
Sbjct: 203 QGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVY 235
>UNIPROTKB|G3V346 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR013822 Pfam:PF02881
GO:GO:0005525 GO:GO:0006614 SUPFAM:SSF47364 EMBL:AL049776
HGNC:HGNC:11301 ChiTaRS:SRP54 ProteinModelPortal:G3V346 SMR:G3V346
Ensembl:ENST00000554803 ArrayExpress:G3V346 Bgee:G3V346
Uniprot:G3V346
Length = 44
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 40/44 (90%), Positives = 43/44 (97%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADV 44
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLEADV
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADV 44
>TIGR_CMR|NSE_0540 [details] [associations]
symbol:NSE_0540 "signal recognition particle protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0048501 "signal recognition
particle, plasma membrane targeting" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500 RefSeq:YP_506423.1
ProteinModelPortal:Q2GDM3 STRING:Q2GDM3 GeneID:3931977
KEGG:nse:NSE_0540 PATRIC:22681129
BioCyc:NSEN222891:GHFU-559-MONOMER Uniprot:Q2GDM3
Length = 449
Score = 200 (75.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 53/146 (36%), Positives = 81/146 (55%)
Query: 6 LGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEM 65
L +KI AL + N VI E+ + ++++ LEADV++ + K+ NVR+ +
Sbjct: 5 LSKKIGGALDGIKNRGVITEKEFDDFVRKLRLTFLEADVSLPVTKQFIANVRESVIGKSR 64
Query: 66 ASGLNKRRMIQSSVYKELIKLVD-PGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
G++ +I S V +EL+K++ K P+ GK ++MFVGLQG GKTTT KLA
Sbjct: 65 VKGISTPAVIGSVVKEELVKILGGESQKFEFPKFGK-QILMFVGLQGVGKTTTAAKLALL 123
Query: 125 YLKKNWKACLVCA-DTFRAGAYDQLK 149
KK K L+ + D +R A QL+
Sbjct: 124 IRKKFKKNILLSSVDIYRPAARKQLE 149
>TIGR_CMR|APH_0349 [details] [associations]
symbol:APH_0349 "signal recognition particle protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_504956.1 ProteinModelPortal:Q2GKZ5 STRING:Q2GKZ5
GeneID:3930944 KEGG:aph:APH_0349 PATRIC:20949288
BioCyc:APHA212042:GHPM-378-MONOMER Uniprot:Q2GKZ5
Length = 449
Score = 195 (73.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 55/146 (37%), Positives = 86/146 (58%)
Query: 6 LGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEM 65
L + +SAL+ LS I+ + + ++++I ALL+ADVN+ +V + ENV+ I ++
Sbjct: 5 LTKGFSSALQRLSGKREISSKDFDLVIEDITQALLDADVNLGVVDEFIENVKSKIVGGDV 64
Query: 66 ASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGK-PNVIMFVGLQGSGKTTTCTKLAYH 124
G+ +M+ + + LI+++ K+ KGK P VIM VGLQG GKTT K+A
Sbjct: 65 VKGVLPEQMVIKRIEECLIEVLG-NEKSALDLKGKIPAVIMMVGLQGVGKTTNTVKVALR 123
Query: 125 YLKKNWKACLVCA-DTFRAGAYDQLK 149
LKK+ K LV + D +R A +QLK
Sbjct: 124 -LKKDSKNPLVASLDVYRPAAREQLK 148
>TIGR_CMR|BA_3983 [details] [associations]
symbol:BA_3983 "signal recognition particle protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 RefSeq:NP_846225.1 RefSeq:YP_020622.1
RefSeq:YP_029947.1 HSSP:O07347 ProteinModelPortal:Q81WJ2 SMR:Q81WJ2
EnsemblBacteria:EBBACT00000009811 EnsemblBacteria:EBBACT00000016655
EnsemblBacteria:EBBACT00000023730 GeneID:1087538 GeneID:2820002
GeneID:2848277 KEGG:ban:BA_3983 KEGG:bar:GBAA_3983 KEGG:bat:BAS3696
BioCyc:BANT260799:GJAJ-3754-MONOMER
BioCyc:BANT261594:GJ7F-3871-MONOMER Uniprot:Q81WJ2
Length = 449
Score = 194 (73.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 57/163 (34%), Positives = 85/163 (52%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQ-V 59
M L ++ ++ + ++E + M++E+ ALLEADVN K+VK + V +
Sbjct: 1 MAFEGLADRLQQTMQKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFVKRVSERA 60
Query: 60 IDFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKP-NVIMFVGLQGSGKTTTC 118
+ D M S L + + V +EL +L+ G ++ KP VIM VGLQG+GKTTT
Sbjct: 61 VGQDVMKS-LTPGQQVIKVVQEELTELMG-GEQSKIAIANKPPTVIMMVGLQGAGKTTTT 118
Query: 119 TKLAYHYLKK-NWKACLVCADTFRAGAYDQLKQNATKARIPFY 160
KLA KK N K LV AD +R A QL+ + +P +
Sbjct: 119 GKLANLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVF 161
>TIGR_CMR|NSE_0545 [details] [associations]
symbol:NSE_0545 "signal recognition particle-docking
protein FtsY" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 GO:GO:0017111 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_506428.1
ProteinModelPortal:Q2GDL8 STRING:Q2GDL8 GeneID:3931766
KEGG:nse:NSE_0545 PATRIC:22681139 OMA:RIISQNQ
BioCyc:NSEN222891:GHFU-564-MONOMER Uniprot:Q2GDL8
Length = 309
Score = 186 (70.5 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 49/169 (28%), Positives = 89/169 (52%)
Query: 2 VLADLGRKITSALRSLSNAT---VINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQ 58
V + + IT + LS+ E++ S ++++ L+ AD+ + +++ + V++
Sbjct: 5 VFSSIRNSITKSRDYLSSGIDNIFAKEKISESTIEQLEELLISADIGPTVTERIIKTVKK 64
Query: 59 VIDFDEMASGLNKRRMIQSSVYKELIKLVDP-GVKAHQPQKGKPNVIMFVGLQGSGKTTT 117
+ ++ G ++S +E+ K++DP K PQ G P VI+F G+ G+GKTTT
Sbjct: 65 I----KVKDG-ESLEQVKSITREEMKKVLDPTSKKLIFPQTG-PQVIVFCGVNGNGKTTT 118
Query: 118 CTKLAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGK 166
KLAY ++++N + D FRA A +QL+ A +A F+ S K
Sbjct: 119 IGKLAYKFIQENKTVMIAACDLFRAAAIEQLRFWAERASATFFSSETSK 167
>TIGR_CMR|SO_1356 [details] [associations]
symbol:SO_1356 "signal recognition particle protein Ffh"
species:211586 "Shewanella oneidensis MR-1" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR001251
PROSITE:PS50191 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347 RefSeq:NP_716976.1
ProteinModelPortal:Q8EH73 GeneID:1169177 KEGG:son:SO_1356
PATRIC:23522366 Uniprot:Q8EH73
Length = 457
Score = 191 (72.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 53/167 (31%), Positives = 88/167 (52%)
Query: 5 DLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDE 64
+L +++ L+++S + EE + L+E+ ALLEADV + +V++ NV++ E
Sbjct: 4 NLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAVGQE 63
Query: 65 MASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
+A L+ + V EL K + +A P V+M GLQG+GKTT+ KL
Sbjct: 64 VAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKLGKL 123
Query: 125 YLKKNWKACLVC-ADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPI 170
++ K+ LV AD +R A QL+ AT+ + F+ S ++ PI
Sbjct: 124 LRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQK-PI 169
>TIGR_CMR|CBU_0450 [details] [associations]
symbol:CBU_0450 "signal recognition particle protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
RefSeq:NP_819486.1 ProteinModelPortal:Q83E79 PRIDE:Q83E79
GeneID:1208334 KEGG:cbu:CBU_0450 PATRIC:17929591
BioCyc:CBUR227377:GJ7S-448-MONOMER Uniprot:Q83E79
Length = 461
Score = 190 (71.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 56/185 (30%), Positives = 93/185 (50%)
Query: 2 VLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVID 61
+L +L ++T+++ L + EE + S L +I +AL+EADV + +VK E+VR+
Sbjct: 1 MLNNLTNRLTTSINKLRGLGRLTEENIQSTLHDIRSALIEADVALPVVKDFIEHVREKAL 60
Query: 62 FDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKL 121
E+ + + V EL L+ + P VI+ GLQGSGKTTT KL
Sbjct: 61 GQEVIGNVRPGEALVKVVQDELTHLLGDELVEINLNAQPPIVIVMAGLQGSGKTTTVAKL 120
Query: 122 AYHYLKKNWKACLVC-ADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSLIPT 180
A L+ K+ +V AD +R A QL+ A++ F+ ++ + P+ + + +
Sbjct: 121 ARWLLEIQKKSVMVASADVYRPAAIQQLETLASQINAIFF-PTQADQKPVE-IAKAALKQ 178
Query: 181 YEKSF 185
EK F
Sbjct: 179 AEKQF 183
>UNIPROTKB|P66844 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003924
GO:GO:0006184 EMBL:BX842581 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 TCDB:3.A.5.2.2 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 PIR:D70747 RefSeq:NP_217432.1
RefSeq:NP_337496.1 RefSeq:YP_006516369.1 ProteinModelPortal:P66844
SMR:P66844 PRIDE:P66844 EnsemblBacteria:EBMYCT00000003158
EnsemblBacteria:EBMYCT00000069261 GeneID:13317709 GeneID:888242
GeneID:925291 KEGG:mtc:MT2984 KEGG:mtu:Rv2916c KEGG:mtv:RVBD_2916c
PATRIC:18128328 TubercuList:Rv2916c Uniprot:P66844
Length = 525
Score = 191 (72.3 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 49/160 (30%), Positives = 81/160 (50%)
Query: 6 LGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEM 65
L ++T+AL+ L + + +++ +EI ALLEADV++ +V+ +++ E+
Sbjct: 5 LSDRLTAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEV 64
Query: 66 ASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHY 125
+S LN + + V +ELI ++ + K P V+M GLQGSGKTT KLA
Sbjct: 65 SSALNPAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTTLAGKLAARL 124
Query: 126 LKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKG 165
+ LV D R A +QL+ +A +P + G
Sbjct: 125 RGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPG 164
>UNIPROTKB|G3V3L9 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR013822 Pfam:PF02881
GO:GO:0005525 GO:GO:0006614 SUPFAM:SSF47364 EMBL:AL049776
HGNC:HGNC:11301 ChiTaRS:SRP54 ProteinModelPortal:G3V3L9 SMR:G3V3L9
Ensembl:ENST00000556380 ArrayExpress:G3V3L9 Bgee:G3V3L9
Uniprot:G3V3L9
Length = 55
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLE 41
MVLADLGRKITSALRSLSNAT+INEEVLN+MLKE+C ALLE
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLE 41
>UNIPROTKB|Q97QD2 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
PIR:F95149 RefSeq:NP_345751.1 ProteinModelPortal:Q97QD2
EnsemblBacteria:EBSTRT00000025249 GeneID:931801 KEGG:spn:SP_1287
PATRIC:19706973 Uniprot:Q97QD2
Length = 523
Score = 188 (71.2 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 54/162 (33%), Positives = 80/162 (49%)
Query: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI 60
M L ++ + ++L I+E + KEI ALLEADV + +VK + VR+
Sbjct: 1 MAFESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERA 60
Query: 61 DFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTK 120
E+ LN + I V +EL ++ P +IM VGLQG+GKTT K
Sbjct: 61 VGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGK 120
Query: 121 LAYHYLKK--NWKACLVCADTFRAGAYDQLKQNATKARIPFY 160
LA + LKK N + ++ AD +R A DQLK + +P +
Sbjct: 121 LA-NKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVF 161
>TIGR_CMR|CPS_4073 [details] [associations]
symbol:CPS_4073 "signal recognition particle protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=ISS] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_270728.1
ProteinModelPortal:Q47WU4 SMR:Q47WU4 STRING:Q47WU4 GeneID:3519232
KEGG:cps:CPS_4073 PATRIC:21471017
BioCyc:CPSY167879:GI48-4086-MONOMER Uniprot:Q47WU4
Length = 463
Score = 182 (69.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 50/183 (27%), Positives = 95/183 (51%)
Query: 5 DLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDE 64
+L +++ L+++S + E+ + L+E+ ALLEADV + ++++ V++ +
Sbjct: 4 NLSERLSKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVIREFIAKVKEKAVGTD 63
Query: 65 MASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
++ L ++ V KEL + + + P V++ GLQG+GKTT+ KLA
Sbjct: 64 VSKSLTPGQIFVKIVQKELESAMGEVNEGLDLRAAPPAVVLMAGLQGAGKTTSVAKLAKF 123
Query: 125 YLKKNWKACLVC-ADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSLIPTYEK 183
++ K LV AD +R A QL+ A + + F+ S K+ PI ++ + I +K
Sbjct: 124 LTEREKKKVLVVSADVYRPAAIKQLETLAEEISVGFFPSDI-KQKPI-DIANAAIDHAKK 181
Query: 184 SFH 186
+F+
Sbjct: 182 NFY 184
>TIGR_CMR|ECH_0475 [details] [associations]
symbol:ECH_0475 "signal recognition particle protein"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005048 "signal sequence
binding" evidence=ISS] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_507291.1 ProteinModelPortal:Q2GGZ2 STRING:Q2GGZ2
GeneID:3927281 KEGG:ech:ECH_0475 PATRIC:20576422
BioCyc:ECHA205920:GJNR-477-MONOMER Uniprot:Q2GGZ2
Length = 448
Score = 181 (68.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 6 LGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEM 65
L +T+ ++ + + VI+ E ++ ++E+ ALLEADV++ +VK NV++ I
Sbjct: 5 LTSSLTNVIQKMQSKHVISSEDFDAAMEEVKVALLEADVSLAVVKDFISNVKEKIVGGTT 64
Query: 66 ASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKP-NVIMFVGLQGSGKTTTCTKLAYH 124
G+ +MI + LI+++ G + + KP +VIM VGLQG GKTTT KLA
Sbjct: 65 VKGVLPTQMIIKKIQDCLIEVL--GSEKCELDISKPLSVIMMVGLQGVGKTTTTAKLALK 122
Query: 125 YLKKNWKACLVCADTFRAGAYDQLK 149
K + + D +R A QL+
Sbjct: 123 LKNKKKEVVMASLDVYRPAAQKQLE 147
>NCBI_NP|NP_355632.2 [details] [associations]
symbol:ffh "signal recognition particle protein"
species:176299 "Agrobacterium fabrum str. C58" [GO:0009306 "protein
secretion" evidence=ISS] REFSEQ:NC_003062 Ncbi:NP_355632
Length = 523
Score = 180 (68.4 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 47/147 (31%), Positives = 79/147 (53%)
Query: 5 DLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDE 64
+L ++ S L L+ + E + + L+E+ ALLEADV +++V+ + VR+
Sbjct: 4 NLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAVGAA 63
Query: 65 MASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
+ + +M+ V+ EL++++ + P VIM VGLQGSGKTTT K+A
Sbjct: 64 VLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKIAKR 123
Query: 125 YLKKNWKACLVCA-DTFRAGAYDQLKQ 150
++ K L+ + DT R A +QL+Q
Sbjct: 124 LTDRDKKKVLMASLDTRRPAAQEQLRQ 150
>TIGR_CMR|CBU_1903 [details] [associations]
symbol:CBU_1903 "signal recognition particle-docking
protein FtsY" species:227377 "Coxiella burnetii RSA 493"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0051301 GO:GO:0003924 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:NRIPDEL
RefSeq:NP_820880.1 HSSP:P10121 ProteinModelPortal:Q83AI3 SMR:Q83AI3
PRIDE:Q83AI3 GeneID:1209816 KEGG:cbu:CBU_1903 PATRIC:17932545
BioCyc:CBUR227377:GJ7S-1878-MONOMER Uniprot:Q83AI3
Length = 324
Score = 173 (66.0 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 17 LSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQ 76
LSN + + + S+L+E+ LL AD+ I+ + + N+ Q + L+ + +
Sbjct: 43 LSNLVLGKKTIDASLLEELEMILLSADIGIEATQSILNNLSQQV----ARKSLSDPKALI 98
Query: 77 SSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVC 136
++ EL+ +++P K H P VI+ VG+ G GKTTT KLA+ Y + + L
Sbjct: 99 DALKIELLNILEPCQK-HLEISASPFVILTVGVNGVGKTTTIAKLAHFYQSQKKRVMLAA 157
Query: 137 ADTFRAGAYDQLKQNATKARIPFYGSSKG 165
DTFRA A +QL+ + P G
Sbjct: 158 GDTFRAAAIEQLQTWGQRNNAPVIAQQPG 186
>UNIPROTKB|P0AGD7 [details] [associations]
symbol:ffh species:83333 "Escherichia coli K-12"
[GO:0048500 "signal recognition particle" evidence=IEA;IMP]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IMP;IDA] [GO:0006612
"protein targeting to membrane" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISS;IMP;IDA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA;IMP]
[GO:0003723 "RNA binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006612 GO:GO:0003924 GO:GO:0008312 PDB:2XXA PDBsum:2XXA
TCDB:3.A.5.1.1 GO:GO:0006614 SUPFAM:SSF47364 PDB:2XKV PDBsum:2XKV
EMBL:X01818 PDB:2J28 PDBsum:2J28 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI PIR:E65039
RefSeq:NP_417101.1 RefSeq:YP_490833.1 PDB:1DUL PDB:1HQ1 PDB:2PXB
PDB:2PXD PDB:2PXE PDB:2PXF PDB:2PXK PDB:2PXL PDB:2PXP PDB:2PXQ
PDB:2PXT PDB:2PXU PDB:2PXV PDB:3LQX PDBsum:1DUL PDBsum:1HQ1
PDBsum:2PXB PDBsum:2PXD PDBsum:2PXE PDBsum:2PXF PDBsum:2PXK
PDBsum:2PXL PDBsum:2PXP PDBsum:2PXQ PDBsum:2PXT PDBsum:2PXU
PDBsum:2PXV PDBsum:3LQX ProteinModelPortal:P0AGD7 SMR:P0AGD7
DIP:DIP-31865N IntAct:P0AGD7 MINT:MINT-1218614 PRIDE:P0AGD7
EnsemblBacteria:EBESCT00000004690 EnsemblBacteria:EBESCT00000014850
GeneID:12933092 GeneID:947102 KEGG:ecj:Y75_p2558 KEGG:eco:b2610
PATRIC:32120619 EchoBASE:EB0296 EcoGene:EG10300
ProtClustDB:PRK10867 BioCyc:EcoCyc:EG10300-MONOMER
BioCyc:ECOL316407:JW5414-MONOMER EvolutionaryTrace:P0AGD7
Genevestigator:P0AGD7 GO:GO:0048500 Uniprot:P0AGD7
Length = 453
Score = 172 (65.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 49/174 (28%), Positives = 87/174 (50%)
Query: 5 DLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDE 64
+L +++ LR++S + E+ + L+E+ ALLEADV + +V++ V++ E
Sbjct: 4 NLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHE 63
Query: 65 MASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
+ L + V EL+ + + P V++ GLQG+GKTT+ KL
Sbjct: 64 VNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKF 123
Query: 125 YLKKNWKACLVC-ADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSL 177
+K+ K LV AD +R A QL+ A + + F+ S G++ P+ + +L
Sbjct: 124 LREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQK-PVDIVNAAL 176
>TIGR_CMR|CHY_1442 [details] [associations]
symbol:CHY_1442 "signal recognition particle-docking
protein FtsY" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047
"signal recognition particle binding" evidence=ISS] [GO:0009306
"protein secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0031226
eggNOG:COG0552 KO:K03110 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 RefSeq:YP_360274.1 ProteinModelPortal:Q3AC60
SMR:Q3AC60 STRING:Q3AC60 GeneID:3728659 KEGG:chy:CHY_1442
PATRIC:21276015 HOGENOM:HOG000036277 OMA:NRIPDEL
BioCyc:CHYD246194:GJCN-1441-MONOMER Uniprot:Q3AC60
Length = 303
Score = 166 (63.5 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 47/162 (29%), Positives = 82/162 (50%)
Query: 8 RKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIK----LVKKLRENVRQVIDFD 63
+ I + + + + ++EE+ L+EI L+E DV +K LV+KLR+ R+
Sbjct: 16 QNIVAKIEDVFKKSTVDEELFEK-LEEI---LIEGDVGVKPSLELVEKLRKTARE----- 66
Query: 64 EMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAY 123
+ ++ + +E++K+++ G + P VI+ VG+ G GKTTT KLAY
Sbjct: 67 ---RRITDSEQLKQVLKEEILKILEAGDNKLKNVPRTPLVILVVGVNGVGKTTTIGKLAY 123
Query: 124 HYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKG 165
++ ++ + L DTFRA A +QL+ K P +G
Sbjct: 124 YFKQQGKQVLLAAGDTFRAAAIEQLEIWGNKVGCPVIKQKEG 165
>TAIR|locus:2118701 [details] [associations]
symbol:AT4G30600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006605 "protein targeting" evidence=ISS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005783 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003924
EMBL:AL161577 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
HOGENOM:HOG000201671 OMA:LILWSSC EMBL:AY065066 EMBL:AY133612
IPI:IPI00534083 PIR:A85358 RefSeq:NP_194789.1 UniGene:At.4581
HSSP:P83749 ProteinModelPortal:Q9M0A0 SMR:Q9M0A0 STRING:Q9M0A0
PaxDb:Q9M0A0 PRIDE:Q9M0A0 EnsemblPlants:AT4G30600.1 GeneID:829183
KEGG:ath:AT4G30600 TAIR:At4g30600 InParanoid:Q9M0A0
PhylomeDB:Q9M0A0 ProtClustDB:CLSN2685629 ArrayExpress:Q9M0A0
Genevestigator:Q9M0A0 Uniprot:Q9M0A0
Length = 634
Score = 168 (64.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 45/168 (26%), Positives = 89/168 (52%)
Query: 11 TSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLN 70
+S +S++ + L LK + L+ +V ++ +KL E+V ++ +++S
Sbjct: 331 SSVFQSITGKANLERTDLGPALKALKERLMTKNVAEEIAEKLCESVEASLEGKKLSSFTR 390
Query: 71 KRRMIQSSVYKELIKLVDP--------GVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLA 122
+Q+++ L++++ P V A + Q+ KP V++FVG+ G GK+T K+A
Sbjct: 391 ISSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQR-KPYVVVFVGVNGVGKSTNLAKVA 449
Query: 123 YHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKG-KRNP 169
Y + + DTFR+GA +QL+ +A + +IP + KG +++P
Sbjct: 450 YWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIF--EKGYEKDP 495
>ASPGD|ASPL0000006202 [details] [associations]
symbol:AN6627 species:162425 "Emericella nidulans"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 EMBL:BN001301 SUPFAM:SSF64356
EMBL:AACD01000110 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 HOGENOM:HOG000201671
OrthoDB:EOG42Z7ZQ RefSeq:XP_664231.1 ProteinModelPortal:Q5AYK3
STRING:Q5AYK3 EnsemblFungi:CADANIAT00007408 GeneID:2870372
KEGG:ani:AN6627.2 OMA:THETGRR Uniprot:Q5AYK3
Length = 636
Score = 154 (59.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 43/155 (27%), Positives = 78/155 (50%)
Query: 10 ITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVI------DFD 63
I LR++ ++ E L LK + LL+ +V + +L E V+Q + +F
Sbjct: 323 IGGLLRNIVGGKILTEADLEKPLKAMEDHLLKKNVAREAAVRLCEGVKQELVGKKTGNFQ 382
Query: 64 EMASGLNK------RRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTT 117
+ + L R+++ + +L+ +D KA++ +P VI VG+ G GK+T
Sbjct: 383 SVDAALKSAMESSLRKILTPTSSLDLLHEIDTVTKANKQGTSRPYVISIVGVNGVGKSTN 442
Query: 118 CTKLAYHYLKKNWKACLVCADTFRAGAYDQLKQNA 152
K+ Y L+ N++ + DTFR+GA +QL+ +A
Sbjct: 443 LGKICYFLLQNNYRILIAACDTFRSGAVEQLRVHA 477
Score = 36 (17.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 2 VLADLGRKITSALRSLSN 19
VL DLG ++ S L + N
Sbjct: 287 VLKDLGDEVHSILENADN 304
>SGD|S000002700 [details] [associations]
symbol:SRP101 "Signal recognition particle (SRP) receptor
alpha subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005525
"GTP binding" evidence=IEA;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA;IC;TAS]
[GO:0005047 "signal recognition particle binding" evidence=ISS;IMP]
[GO:0005785 "signal recognition particle receptor complex"
evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0045047 "protein targeting to ER"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SGD:S000002700 GO:GO:0005525
EMBL:BK006938 GO:GO:0017111 SUPFAM:SSF64356 EMBL:U51031
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 RefSeq:NP_010578.3
GeneID:851886 KEGG:sce:YDR292C KO:K13431 RefSeq:NP_010582.3
GeneID:851890 KEGG:sce:YDR296W GO:GO:0005785 TCDB:3.A.5.8.1
GO:GO:0005047 PDB:1NRJ PDBsum:1NRJ HOGENOM:HOG000201671
GeneTree:ENSGT00550000074936 OrthoDB:EOG42Z7ZQ EMBL:M77274
PIR:S70121 ProteinModelPortal:P32916 SMR:P32916 DIP:DIP-1672N
IntAct:P32916 MINT:MINT-364995 STRING:P32916 PaxDb:P32916
PeptideAtlas:P32916 EnsemblFungi:YDR292C CYGD:YDR292c OMA:HVENLAQ
EvolutionaryTrace:P32916 NextBio:969862 Genevestigator:P32916
GermOnline:YDR292C InterPro:IPR015284 Pfam:PF09201 Uniprot:P32916
Length = 621
Score = 166 (63.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 50/183 (27%), Positives = 90/183 (49%)
Query: 17 LSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQ 76
L N T INE L S+L+++ L+ +V + L + V + + A+ + +
Sbjct: 301 LGNKT-INESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDLVGSKTANWTSVENTAR 359
Query: 77 SSVYKELIKLVDPGV-----------KAHQPQKGK--PNVIMFVGLQGSGKTTTCTKLAY 123
S+ K L +++ PGV ++ + ++GK P V VG+ G GK+T +KLA+
Sbjct: 360 ESLTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAF 419
Query: 124 HYLKKNWKACLVCADTFRAGAYDQLKQNATK-ARIPFYGSSKGKRNPIHNMGLSLIPTYE 182
L+ N+K +V DTFR+GA +QL+ + A++ +G +N G + +E
Sbjct: 420 WLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFE 479
Query: 183 KSF 185
+
Sbjct: 480 AGY 482
>TIGR_CMR|SPO_1339 [details] [associations]
symbol:SPO_1339 "signal recognition particle-docking
protein FtsY" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_166581.1 ProteinModelPortal:Q5LTS4 SMR:Q5LTS4
GeneID:3192959 KEGG:sil:SPO1339 PATRIC:23375989 Uniprot:Q5LTS4
Length = 390
Score = 162 (62.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 43/163 (26%), Positives = 83/163 (50%)
Query: 4 ADLGRKITSALRSL-SNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDF 62
A GR + L + ATV+ + + ML+++ L+ AD+ + ++ N+ +
Sbjct: 92 AGTGRGLLGRLFARPGGATVVRRTLDDDMLEQLEELLIAADMGVDTALRVTANMAE---- 147
Query: 63 DEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLA 122
+ L+ + I++ + +E+ ++++P + +P V++ VG+ GSGKTTT KLA
Sbjct: 148 GRIGRKLSTQE-IKALLAQEITRIMEPVARPMPLYPKRPQVVLVVGVNGSGKTTTIGKLA 206
Query: 123 YHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKG 165
+ K + DTFRA A +QL+ +A +P + +G
Sbjct: 207 SQFKAAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEG 249
>TIGR_CMR|VC_0560 [details] [associations]
symbol:VC_0560 "signal recognition particle protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 PIR:H82306 RefSeq:NP_230211.1
HSSP:P07019 ProteinModelPortal:Q9KUG1 SMR:Q9KUG1 DNASU:2615237
GeneID:2615237 KEGG:vch:VC0560 PATRIC:20080238 Uniprot:Q9KUG1
Length = 461
Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 50/183 (27%), Positives = 94/183 (51%)
Query: 5 DLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDE 64
+L +++ L+++S + E+ + L+E+ ALLEADV + +V+ V++ E
Sbjct: 4 NLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAVGVE 63
Query: 65 MASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
++ L + V ++L ++ +A P VI+ GLQG+GKTT+ KL+
Sbjct: 64 VSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKLSKL 123
Query: 125 YLKKNWKACLVC-ADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSLIPTYEK 183
+++ K LV AD +R A QL+ A + F+ S+ ++ PI ++ + I +K
Sbjct: 124 LKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQK-PI-DIANAAIDHAKK 181
Query: 184 SFH 186
F+
Sbjct: 182 KFY 184
>TIGR_CMR|SPO_3246 [details] [associations]
symbol:SPO_3246 "signal recognition particle protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_168449.1
ProteinModelPortal:Q5LNF9 GeneID:3195205 KEGG:sil:SPO3246
PATRIC:23379937 Uniprot:Q5LNF9
Length = 510
Score = 160 (61.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 44/150 (29%), Positives = 76/150 (50%)
Query: 5 DLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDE 64
+L +++ L+ ++EE + + L+E+ ALLEADV++ + + + V+
Sbjct: 4 NLSERLSGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVARDFVKAVQDKATGQA 63
Query: 65 MASGLNKRRMIQSSVYKELIKLV----DPG-VKAHQPQKGKPNVIMFVGLQGSGKTTTCT 119
+ + + + V+ L+ ++ DPG +K P P I+ VGLQG GKTTT
Sbjct: 64 VTKSVTPGQQVVKIVHDTLVDVLRGAEDPGKLKIDNP----PAPILMVGLQGGGKTTTTA 119
Query: 120 KLAYHYLKKNWKACLVCA-DTFRAGAYDQL 148
KLA ++ K L+ + D +R A DQL
Sbjct: 120 KLAKRLKEREGKKVLMASLDVYRPAAMDQL 149
>TIGR_CMR|ECH_1111 [details] [associations]
symbol:ECH_1111 "signal recognition particle-docking
protein FtsY" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006184 GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_507895.1
ProteinModelPortal:Q2GF88 STRING:Q2GF88 GeneID:3927733
KEGG:ech:ECH_1111 PATRIC:20577558 OMA:ADMGVET
BioCyc:ECHA205920:GJNR-1114-MONOMER Uniprot:Q2GF88
Length = 310
Score = 151 (58.2 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 50/159 (31%), Positives = 80/159 (50%)
Query: 9 KITSALRSL-SNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMAS 67
K++ ++ + S+ +++E L LKE+ L+ ADV L + + F+EM
Sbjct: 23 KLSDGIKKIFSSGKKVDQETLEE-LKEL---LITADVGYDNASLLTQKLAST-KFNEMDD 77
Query: 68 GLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYLK 127
K+++ +S + ++ V+ + + KP+VIM G G+GKTTT KLA H K
Sbjct: 78 NTVKQKLAES--IENILLQVEKPLSINN----KPHVIMVCGTNGNGKTTTIGKLA-HRFK 130
Query: 128 KNWKACLVCA-DTFRAGAYDQLKQNATKARIPFYGSSKG 165
K LV A DTFRA A +QL + K P ++G
Sbjct: 131 NTGKKVLVAACDTFRAAATEQLIVWSQKVNFPVVTGNQG 169
>UNIPROTKB|Q97QH0 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HSSP:P83749 PIR:D95144
RefSeq:NP_345709.1 ProteinModelPortal:Q97QH0
EnsemblBacteria:EBSTRT00000026851 GeneID:931757 KEGG:spn:SP_1244
PATRIC:19706881 OMA:DEGKSVI Uniprot:Q97QH0
Length = 429
Score = 154 (59.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 43/154 (27%), Positives = 76/154 (49%)
Query: 8 RKITSALRSLSNATVIN-EEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMA 66
+K + + NA N V +E+ L+ +DV +++ L E +R ++
Sbjct: 133 KKTRTGFGARLNAFFANFRSVDEEFFEELEELLIMSDVGVQVASNLTEELR----YEAKL 188
Query: 67 SGLNKRRMIQSSVYKELIKLVDPGVKAHQPQKGKPN--VIMFVGLQGSGKTTTCTKLAYH 124
K +++ + ++L++L + + + N V++FVG+ G GKTT+ KLA+
Sbjct: 189 ENAKKPDVLRRVIIEKLVELYEKDGSYDESIHFQDNLTVMLFVGVNGVGKTTSIGKLAHR 248
Query: 125 YLKKNWKACLVCADTFRAGAYDQLKQNATKARIP 158
Y + K LV ADTFRAGA QL + + +P
Sbjct: 249 YKQAGKKVMLVAADTFRAGAVAQLAEWGRRVDVP 282
>TIGR_CMR|CJE_1340 [details] [associations]
symbol:CJE_1340 "signal recognition particle-docking
protein FtsY" species:195099 "Campylobacter jejuni RM1221"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005737 GO:GO:0003924
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0031226
eggNOG:COG0552 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HOGENOM:HOG000036277
RefSeq:YP_179327.1 ProteinModelPortal:Q5HTQ8 STRING:Q5HTQ8
GeneID:3231847 KEGG:cjr:CJE1340 PATRIC:20044480 OMA:DLVTPKQ
BioCyc:CJEJ195099:GJC0-1366-MONOMER Uniprot:Q5HTQ8
Length = 288
Score = 150 (57.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 46/142 (32%), Positives = 77/142 (54%)
Query: 24 NEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKEL 83
N+++ +L+EI LLEADV+ ++V+++ + + +E+ KR M +Y++
Sbjct: 23 NKKITKDLLEEI---LLEADVSYEIVEEI---IYYLPPQNEVKKEDLKRVMGSYFLYEK- 75
Query: 84 IKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAG 143
+ + KP V + +G+ G+GKTT+ KLAY Y +N K L DTFRAG
Sbjct: 76 ----------KETNQEKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAG 125
Query: 144 AYDQLKQNATKARIPFYGSSKG 165
A +QLK A K + +++G
Sbjct: 126 AIEQLKLWAQKVDVDIVLTAQG 147
>UNIPROTKB|P83749 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0006184
GO:GO:0017111 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
EMBL:AY484668 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2IYL PDB:2J7P PDB:2Q9A
PDB:2Q9B PDB:2Q9C PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW
PDBsum:2IYL PDBsum:2J7P PDBsum:2Q9A PDBsum:2Q9B PDBsum:2Q9C
PDBsum:2XKV ProteinModelPortal:P83749 SMR:P83749 IntAct:P83749
EvolutionaryTrace:P83749 Uniprot:P83749
Length = 304
Score = 146 (56.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 28 LNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELIKLV 87
L +L+E+ ALL ADV + +++ + VR ASG R+ ++ +V ++L+ ++
Sbjct: 28 LEEVLEELEMALLAADVGLSATEEILQEVR--------ASG---RKDLKEAVKEKLVGML 76
Query: 88 DPGVK-------AHQPQKGKP-----NVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLV 135
+P + PQK KP V++ VG+ G GKTTT KL +Y K
Sbjct: 77 EPDERRATLRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFC 136
Query: 136 CADTFRAGAYDQLKQNATKARIPFYGSSKG 165
DTFRA QL + + IP +G
Sbjct: 137 AGDTFRAAGGTQLSEWGKRLSIPVIQGPEG 166
>TIGR_CMR|CJE_0809 [details] [associations]
symbol:CJE_0809 "signal recognition particle protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
OMA:DSGKTEQ PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
ProtClustDB:PRK10867 GO:GO:0048500 RefSeq:YP_178813.1
ProteinModelPortal:Q5HV72 STRING:Q5HV72 GeneID:3230759
KEGG:cjr:CJE0809 PATRIC:20043363 BioCyc:CJEJ195099:GJC0-824-MONOMER
Uniprot:Q5HV72
Length = 445
Score = 149 (57.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 49/165 (29%), Positives = 86/165 (52%)
Query: 10 ITSALRSLSNAT--VINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMAS 67
++ + +S N V +E+ L + L+ + ALL+ADV+ K+ K+L +I+ D +
Sbjct: 5 VSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHKVTKELLT----LIEEDVKQN 60
Query: 68 GLNKRRMIQS-SVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYL 126
G+ +++ + + V E I V+ + P V++ GLQG GKTT+ KLA +YL
Sbjct: 61 GIGQKQFLNAIKVNLENILSVNGKNQGFVFASKPPTVVLMAGLQGGGKTTSTIKLA-NYL 119
Query: 127 K-KNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPI 170
K +N K + D R A +QL+Q I + + +++PI
Sbjct: 120 KLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELF-FIENEKDPI 163
>POMBASE|SPBC3B9.03 [details] [associations]
symbol:SPBC3B9.03 "signal recognition particle receptor
alpha subunit Srp101 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003924 "GTPase activity" evidence=ISM] [GO:0005047
"signal recognition particle binding" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPBC3B9.03
GO:GO:0005525 GO:GO:0005829 GO:GO:0005634 EMBL:CU329671
GO:GO:0003924 GenomeReviews:CU329671_GR SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 HSSP:Q6MTB9 HOGENOM:HOG000201671
PIR:T40342 RefSeq:NP_596660.1 ProteinModelPortal:O43032
STRING:O43032 EnsemblFungi:SPBC3B9.03.1 GeneID:2540909
KEGG:spo:SPBC3B9.03 OMA:PVEANND OrthoDB:EOG42Z7ZQ NextBio:20802024
Uniprot:O43032
Length = 547
Score = 146 (56.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 41/146 (28%), Positives = 75/146 (51%)
Query: 12 SALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVR------QVIDFDEM 65
S +L + EE L+ +LK++ L + +V + +L E+V+ +V FD +
Sbjct: 245 SLFSNLIGGKYLKEEDLSPILKQMQEHLTKKNVANSIALELCESVKASLINKKVGSFDTV 304
Query: 66 ASGLNKR---RMIQSSVYKELIKLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLA 122
+ +NK R+ Q + L+ +++ + + +P I +G+ G GK+TT K+A
Sbjct: 305 KNTVNKAFRDRLTQILTPSTSLDLLH-SIRSVRKNENRPYTISLIGVNGVGKSTTLAKIA 363
Query: 123 YHYLKKNWKACLVCADTFRAGAYDQL 148
Y L N++ + DTFR+GA +QL
Sbjct: 364 YWLLSNNFRILVAACDTFRSGAIEQL 389
>TIGR_CMR|GSU_1132 [details] [associations]
symbol:GSU_1132 "signal recognition particle-docking
protein FtsY" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:NP_952185.1
ProteinModelPortal:Q74E32 SMR:Q74E32 GeneID:2686843
KEGG:gsu:GSU1132 PATRIC:22025026 OMA:HLMAELE
BioCyc:GSUL243231:GH27-1142-MONOMER Uniprot:Q74E32
Length = 350
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 25 EEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELI 84
+E+ L+E+ L+ AD+ ++ +L + Q + +E+ G R ++ ++ L
Sbjct: 77 KEIDADTLEELEEILITADLGVQTTVELIRGLEQRLSRNELKDGEALREALKEDIHGRLA 136
Query: 85 KLVDPGVKAHQPQK--GKPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRA 142
+ AHQ P VIM +G+ G GKTTT KLA + + K L DTFRA
Sbjct: 137 R------DAHQLDVTGASPFVIMVIGVNGVGKTTTIGKLAARFTAQGKKVILAAGDTFRA 190
Query: 143 GAYDQLK 149
A +QL+
Sbjct: 191 AAAEQLQ 197
>TIGR_CMR|BA_3985 [details] [associations]
symbol:BA_3985 "signal recognition particle-docking protein
FtsY" species:198094 "Bacillus anthracis str. Ames" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 HSSP:P83749 HOGENOM:HOG000036277
RefSeq:NP_846227.1 RefSeq:YP_020624.1 RefSeq:YP_029949.1
ProteinModelPortal:Q81WJ0 SMR:Q81WJ0 DNASU:1086789
EnsemblBacteria:EBBACT00000008913 EnsemblBacteria:EBBACT00000016260
EnsemblBacteria:EBBACT00000019469 GeneID:1086789 GeneID:2817443
GeneID:2848220 KEGG:ban:BA_3985 KEGG:bar:GBAA_3985 KEGG:bat:BAS3698
OMA:LVYRYRK BioCyc:BANT260799:GJAJ-3756-MONOMER
BioCyc:BANT261594:GJ7F-3873-MONOMER Uniprot:Q81WJ0
Length = 329
Score = 139 (54.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 41/128 (32%), Positives = 68/128 (53%)
Query: 26 EVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELIK 85
+V +E+ L+ ADV + V +L + +++ + + R +Q+ + ++LI+
Sbjct: 46 KVDEDFFEELEEILIGADVGVSTVMELIDQLKEEVQ----RRNIQDPREVQAVISEKLIE 101
Query: 86 LV--DPGVKAH-QPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCA-DTFR 141
+ D QK V++FVG+ G GKTTT K+A H K K+ L+ A DTFR
Sbjct: 102 IYKGDSDFTNEVNMQKDGLTVVLFVGVNGVGKTTTIGKMA-HKFKSEGKSVLLAAGDTFR 160
Query: 142 AGAYDQLK 149
AGA +QL+
Sbjct: 161 AGAIEQLE 168
>TIGR_CMR|VC_0147 [details] [associations]
symbol:VC_0147 "signal recognition particle-docking protein
FtsY" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0051301 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 OMA:VEAVAIQ HSSP:P10121 PIR:B82360
RefSeq:NP_229805.1 ProteinModelPortal:Q9KVJ6 SMR:Q9KVJ6
DNASU:2614855 GeneID:2614855 KEGG:vch:VC0147 PATRIC:20079332
Uniprot:Q9KVJ6
Length = 391
Score = 139 (54.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 25 EEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELI 84
+++ + + +E+ LL ADV + K+ N+ ++ G +++ + + L
Sbjct: 114 KKIDDDLFEELEEQLLIADVGMDTTSKIIANLTARASRQQLRDGEALYGLLKEEMAEILS 173
Query: 85 KLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAGA 144
++ P V +K KP VI+ VG+ G GKTTT KLA + + K L DTFRA A
Sbjct: 174 QVEQPLVI--DTEK-KPYVILMVGVNGVGKTTTIGKLAKQFQAQGKKVMLAAGDTFRAAA 230
Query: 145 YDQLKQNATKARIPFYGSSKG 165
+QL+ + ++P G
Sbjct: 231 VEQLQVWGERNQVPVIAQHTG 251
>TIGR_CMR|APH_1227 [details] [associations]
symbol:APH_1227 "signal recognition particle-docking
protein FtsY" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_505757.1 ProteinModelPortal:Q2GIP4 STRING:Q2GIP4
GeneID:3931129 KEGG:aph:APH_1227 PATRIC:20951240
BioCyc:APHA212042:GHPM-1232-MONOMER Uniprot:Q2GIP4
Length = 305
Score = 134 (52.2 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 101 PNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFY 160
P++I+ G+ GSGKTTT KLA+ ++KKN + DTFRA A +QL A + P
Sbjct: 103 PHIILLCGVNGSGKTTTVAKLAHKFMKKNMSVIIGACDTFRAAAVEQLNVWAERISCPIV 162
Query: 161 GSSKG 165
+ G
Sbjct: 163 TGTIG 167
Score = 37 (18.1 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 4 ADLGRKITSALRSLSNATVINEEVLNSMLKEICAAL----LEADVNIKLVKKLRENVRQ 58
AD+ + ALR L +T + +V + ++I + +V +KL ++ EN Q
Sbjct: 34 ADVDQSTLKALRDLLISTDMGPDVADFFTQKISTLKFTDSVAEEVRLKLASEI-ENFLQ 91
>TIGR_CMR|CPS_0157 [details] [associations]
symbol:CPS_0157 "signal recognition particle-docking
protein FtsY" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0031226
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_266925.1
ProteinModelPortal:Q48AI8 SMR:Q48AI8 STRING:Q48AI8 GeneID:3519649
KEGG:cps:CPS_0157 PATRIC:21463731 OMA:VEAVAIQ
BioCyc:CPSY167879:GI48-260-MONOMER Uniprot:Q48AI8
Length = 481
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 25 EEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELI 84
+++ + + +E+ LL ADV ++ K+ E++ Q + ++ +++ + K +
Sbjct: 206 KQIDDDLFEELETHLLLADVGVETTMKIIESLTQSANRKQLKDASALYDLLKIELKKVIE 265
Query: 85 KLVDPGVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAGA 144
+ P V P+ P VI+ VG+ G GKTTT KLA + + L DTFRA A
Sbjct: 266 DVSQPLVI---PEDDGPFVILMVGVNGVGKTTTIGKLAKQFQAQGKSVMLAAGDTFRAAA 322
Query: 145 YDQLKQNATKARIPFYGSSKG 165
+QL+ + IP G
Sbjct: 323 VEQLQVWGERNNIPVIAQHTG 343
>CGD|CAL0003010 [details] [associations]
symbol:orf19.3952 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045047 "protein targeting to ER" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 CGD:CAL0003010 GO:GO:0005525
GO:GO:0003924 EMBL:AACQ01000012 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
RefSeq:XP_721861.1 ProteinModelPortal:Q5AK68 STRING:Q5AK68
GeneID:3636513 KEGG:cal:CaO19.3952 Uniprot:Q5AK68
Length = 535
Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 48 LVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYK-----ELIKLVDPGVKA---HQPQKG 99
+ K + + I D++ + L+ + + +VYK EL K++ P V H ++
Sbjct: 256 ITKNITPGIATTI-IDKIKTKLSANKKVTMAVYKQALTDELTKILTPNVSTDLLHDIKRN 314
Query: 100 -----KPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCA-DTFRAGAYDQLK 149
+P VI VG+ G GK+T KLA+ +L+ N L+CA DTFR+GA +QLK
Sbjct: 315 AELNTRPYVISVVGVNGVGKSTNLAKLAFWFLQNNLNV-LICACDTFRSGAVEQLK 369
>FB|FBgn0010391 [details] [associations]
symbol:Gtp-bp "GTP-binding protein" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0007409
"axonogenesis" evidence=IEP] [GO:0050708 "regulation of protein
secretion" evidence=IEP] [GO:0005785 "signal recognition particle
receptor complex" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005789 GO:GO:0005811 EMBL:AE014298
GO:GO:0003924 GO:GO:0003723 GO:GO:0007409 GO:GO:0050708
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 OMA:LILWSSC EMBL:AY061329
EMBL:S65640 RefSeq:NP_524887.2 UniGene:Dm.129
ProteinModelPortal:Q9U5L1 SMR:Q9U5L1 IntAct:Q9U5L1 MINT:MINT-765133
STRING:Q9U5L1 PaxDb:Q9U5L1 EnsemblMetazoa:FBtr0073480 GeneID:47251
KEGG:dme:Dmel_CG2522 CTD:47251 FlyBase:FBgn0010391
GeneTree:ENSGT00550000074936 InParanoid:Q9U5L1 OrthoDB:EOG4W0VV7
PhylomeDB:Q9U5L1 GenomeRNAi:47251 NextBio:838983 Bgee:Q9U5L1
GermOnline:CG2522 Uniprot:Q9U5L1
Length = 614
Score = 139 (54.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/183 (21%), Positives = 91/183 (49%)
Query: 10 ITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGL 69
+ S + + A ++ L L+++ L+ +V ++ KL ++V +D +M +
Sbjct: 297 LLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEIAAKLCDSVAASLDGKQMGTFD 356
Query: 70 NKRRMIQSSVYKELIKLVDPGVKA-------HQPQKGKPNVIMFVGLQGSGKTTTCTKLA 122
+ ++ ++ + L++++ P + + G+P I+F G+ G GK+T K+
Sbjct: 357 SIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKIC 416
Query: 123 YHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSLIPTYE 182
+ ++ ++ + DTFRAGA +QL+ + T+ + ++K H+ G +++ YE
Sbjct: 417 FWLIENDFNVLIAACDTFRAGAVEQLRTH-TRHLNALHPAAK------HD-GRNMVQLYE 468
Query: 183 KSF 185
K +
Sbjct: 469 KGY 471
>UNIPROTKB|P66842 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006184 EMBL:BX842581 GO:GO:0017111 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 PIR:A70748 RefSeq:NP_217437.1
RefSeq:NP_337502.1 RefSeq:YP_006516374.1 ProteinModelPortal:P66842
SMR:P66842 TCDB:3.A.5.2.2 PhosSite:P12071727 PRIDE:P66842
EnsemblBacteria:EBMYCT00000000121 EnsemblBacteria:EBMYCT00000072194
GeneID:13317714 GeneID:887205 GeneID:925285 KEGG:mtc:MT2989
KEGG:mtu:Rv2921c KEGG:mtv:RVBD_2921c PATRIC:18128342
TubercuList:Rv2921c OMA:FIGIGEN Uniprot:P66842
Length = 422
Score = 138 (53.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 37/116 (31%), Positives = 60/116 (51%)
Query: 39 LLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELIKLVDPGVKAHQPQK 98
LL AD+ + +R + + + + R +++ + EL +D ++A P
Sbjct: 162 LLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMDRSIRA-LPHA 220
Query: 99 GKPNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAGAYDQLKQNATK 154
G P+V++ VG+ G+GKTTT KLA + + L ADTFRA A DQL+ A +
Sbjct: 221 GHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAAR 276
>TIGR_CMR|SO_4586 [details] [associations]
symbol:SO_4586 "signal recognition particle-docking protein
FtsY" species:211586 "Shewanella oneidensis MR-1" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031226 HOGENOM:HOG000036278
KO:K03110 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
HSSP:P10121 RefSeq:NP_720102.1 ProteinModelPortal:Q8E8S5 SMR:Q8E8S5
GeneID:1172171 KEGG:son:SO_4586 PATRIC:23528839 OMA:PDNANGP
Uniprot:Q8E8S5
Length = 510
Score = 138 (53.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 25 EEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELI 84
+++ + + +E+ LL ADV ++ +L +++ + + L + + E+
Sbjct: 230 KKIDDELFEELEEQLLIADVGVETTGRLIKSLTEHASRKQ----LKDAEALYDLLRDEMQ 285
Query: 85 KLVDPGVKAHQPQKGK-PNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAG 143
K +DP P+ P VI+ VG+ G GKTTT KLA Y ++ L DTFRA
Sbjct: 286 KTLDPVAIPLVPENANGPFVILMVGVNGVGKTTTIGKLAKQYQRQGKSVMLAAGDTFRAA 345
Query: 144 AYDQLKQNATKARIPFYGSSKG 165
A +QL+ + IP G
Sbjct: 346 AVEQLQVWGQRNNIPVVAQHTG 367
>DICTYBASE|DDB_G0277377 [details] [associations]
symbol:srpR "signal recognition particle receptor
alpha subunit" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 dictyBase:DDB_G0277377 GO:GO:0005525
GO:GO:0005789 GO:GO:0003924 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005785 GO:GO:0005047
HSSP:P08240 RefSeq:XP_642799.1 ProteinModelPortal:Q54ZR7
STRING:Q54ZR7 EnsemblProtists:DDB0252680 GeneID:8620992
KEGG:ddi:DDB_G0277377 OMA:LILWSSC ProtClustDB:CLSZ2846855
Uniprot:Q54ZR7
Length = 615
Score = 137 (53.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 39/156 (25%), Positives = 78/156 (50%)
Query: 17 LSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQ 76
L+ VI+++ L +L + L + +V + K+ +++ ++ ++A+ +++
Sbjct: 317 LTGNRVIDKQDLEPILADFKLHLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVK 376
Query: 77 SSVYKELIKLVDPG-----VKAHQPQKGK-PNVIMFVGLQGSGKTTTCTKLAYHYLKKNW 130
+ + +++ P ++ Q KGK P I+F G+ G GK+T K+ Y +
Sbjct: 377 QQMEDTITRILTPKRNIDILREVQAVKGKRPYSIVFSGVNGVGKSTNLAKVCYWLTANGY 436
Query: 131 KACLVCADTFRAGAYDQLKQNATKARIPFY--GSSK 164
K L DTFR+GA +QLK +A + + + G SK
Sbjct: 437 KCMLAACDTFRSGAIEQLKTHADRLNVHLFERGYSK 472
>UNIPROTKB|P10121 [details] [associations]
symbol:ftsY "SRP receptor" species:83333 "Escherichia coli
K-12" [GO:0006184 "GTP catabolic process" evidence=IEA;IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031226 "intrinsic to
plasma membrane" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005829 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0031226 EMBL:X04398
PIR:S03130 RefSeq:NP_417921.1 RefSeq:YP_491970.1 PDB:1FTS PDB:2QY9
PDB:2XXA PDB:2YHS PDBsum:1FTS PDBsum:2QY9 PDBsum:2XXA PDBsum:2YHS
ProteinModelPortal:P10121 SMR:P10121 DIP:DIP-9709N IntAct:P10121
MINT:MINT-1247716 TCDB:3.A.5.1.1 PRIDE:P10121
EnsemblBacteria:EBESCT00000004496 EnsemblBacteria:EBESCT00000016891
GeneID:12933505 GeneID:947978 KEGG:ecj:Y75_p3714 KEGG:eco:b3464
PATRIC:32122372 EchoBASE:EB0342 EcoGene:EG10346 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 OMA:AETNAEY ProtClustDB:PRK10416
BioCyc:EcoCyc:EG10346-MONOMER BioCyc:ECOL316407:JW3429-MONOMER
EvolutionaryTrace:P10121 Genevestigator:P10121 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 Uniprot:P10121
Length = 497
Score = 134 (52.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 39/142 (27%), Positives = 70/142 (49%)
Query: 25 EEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRRMIQSSVYKELI 84
+++ + + +E+ LL ADV ++ +K+ N+ + ++ +++ + E++
Sbjct: 221 KKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEM-GEIL 279
Query: 85 KLVDPGVKAHQPQKGK-PNVIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTFRAG 143
VD + +GK P VI+ VG+ G GKTTT KLA + ++ L DTFRA
Sbjct: 280 AKVDEPLNV----EGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAA 335
Query: 144 AYDQLKQNATKARIPFYGSSKG 165
A +QL+ + IP G
Sbjct: 336 AVEQLQVWGQRNNIPVIAQHTG 357
>WB|WBGene00009521 [details] [associations]
symbol:F38A1.8 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0048477
SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:FO080472 EMBL:FO081324 EMBL:FO081776
RefSeq:NP_741303.2 ProteinModelPortal:G4RYA5 SMR:G4RYA5
EnsemblMetazoa:F38A1.8 GeneID:185438 KEGG:cel:CELE_F38A1.8
CTD:185438 WormBase:F38A1.8 NextBio:928280 Uniprot:G4RYA5
Length = 625
Score = 133 (51.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 38/149 (25%), Positives = 81/149 (54%)
Query: 12 SALRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNK 71
S ++ L ++ E LN +++++ L+ +V + +K+ ++V ++ + +
Sbjct: 316 SMIKGLVGEKKLSAEDLNPLIEKMRENLILKNVASEPAEKICQSVVSKLEGKVVNNFSRV 375
Query: 72 RRMIQSSVYKELIKLVDPGVKA-------HQPQKGKPNVIMFVGLQGSGKTTTCTKLAYH 124
+ ++++V + L++L+ P + + G+P VI+F G+ G GK+T K+ +
Sbjct: 376 AQEVKTAVRESLVQLLTPKHRVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKITF- 434
Query: 125 YLKKNWKACLVCA-DTFRAGAYDQLKQNA 152
+L +N L+ A DTFRAGA +QL+ +A
Sbjct: 435 WLTENKHRVLIAAGDTFRAGAVEQLRTHA 463
>MGI|MGI:1914648 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005785 "signal recognition particle
receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 MGI:MGI:1914648 GO:GO:0005525 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:AK004967 EMBL:AK038017 EMBL:BC012512 EMBL:BC021839
IPI:IPI00119695 RefSeq:NP_080406.1 UniGene:Mm.284688
ProteinModelPortal:Q9DBG7 SMR:Q9DBG7 STRING:Q9DBG7
PhosphoSite:Q9DBG7 PaxDb:Q9DBG7 PRIDE:Q9DBG7
Ensembl:ENSMUST00000034541 GeneID:67398 KEGG:mmu:67398
UCSC:uc009osy.1 InParanoid:Q9DBG7 NextBio:324466 Bgee:Q9DBG7
Genevestigator:Q9DBG7 GermOnline:ENSMUSG00000032042 Uniprot:Q9DBG7
Length = 636
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/148 (21%), Positives = 74/148 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 322 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 381
Query: 74 MIQSSVYKELIKLVDPGVKAHQ-------PQKGKPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + ++ +P V+ F G+ G GK+T K+++ L
Sbjct: 382 TVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLL 441
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 442 ENGFSVLIAACDTFRAGAVEQLRTHTRR 469
>RGD|1311504 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10116 "Rattus norvegicus" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:1311504 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:BC105782 IPI:IPI00362579 RefSeq:NP_001029322.1
UniGene:Rn.18349 SMR:Q3KRC3 STRING:Q3KRC3
Ensembl:ENSRNOT00000015177 GeneID:315548 KEGG:rno:315548
UCSC:RGD:1311504 InParanoid:Q3KRC3 NextBio:669402
Genevestigator:Q3KRC3 Uniprot:Q3KRC3
Length = 636
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/148 (21%), Positives = 74/148 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 322 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 381
Query: 74 MIQSSVYKELIKLVDPGVKAHQ-------PQKGKPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + ++ +P V+ F G+ G GK+T K+++ L
Sbjct: 382 TVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLL 441
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 442 ENGFSVLIAACDTFRAGAVEQLRTHTRR 469
>UNIPROTKB|P08240 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005047 "signal recognition particle binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=TAS] [GO:0006613
"cotranslational protein targeting to membrane" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0016021 Reactome:REACT_116125 GO:GO:0006987 EMBL:CH471065
GO:GO:0006412 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
PDB:2GO5 PDBsum:2GO5 PDB:2FH5 PDBsum:2FH5 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X06272 EMBL:AK312377 EMBL:AP001318 EMBL:BC001162 EMBL:BC009110
EMBL:BC013583 IPI:IPI00385267 PIR:A29440 RefSeq:NP_001171313.1
RefSeq:NP_003130.2 UniGene:Hs.368376 ProteinModelPortal:P08240
SMR:P08240 IntAct:P08240 MINT:MINT-1404634 STRING:P08240
PhosphoSite:P08240 DMDM:20455516 PaxDb:P08240 PRIDE:P08240
DNASU:6734 Ensembl:ENST00000332118 GeneID:6734 KEGG:hsa:6734
UCSC:uc001qdh.3 GeneCards:GC11M126132 HGNC:HGNC:11307 MIM:182180
neXtProt:NX_P08240 PharmGKB:PA36131 InParanoid:P08240 OMA:KEGSDGP
ChiTaRS:SRPR EvolutionaryTrace:P08240 GenomeRNAi:6734 NextBio:26272
ArrayExpress:P08240 Bgee:P08240 CleanEx:HS_SRPR
Genevestigator:P08240 GermOnline:ENSG00000182934 Uniprot:P08240
Length = 638
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/148 (21%), Positives = 74/148 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 324 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 383
Query: 74 MIQSSVYKELIKLVDPGVKAHQ-------PQKGKPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + ++ +P V+ F G+ G GK+T K+++ L
Sbjct: 384 TVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 444 ENGFSVLIAACDTFRAGAVEQLRTHTRR 471
>UNIPROTKB|Q3V8C7 [details] [associations]
symbol:flhF "Flagellar biogenesis protein FlhF"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR020006 Pfam:PF00448 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005886 GO:GO:0019861
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0043064
GO:GO:0006614 KO:K02404 HOGENOM:HOG000254735 RefSeq:NP_954097.2
ProteinModelPortal:Q3V8C7 GeneID:2686907 KEGG:gsu:GSU3055
PATRIC:22028961 OMA:YRNELLV ProtClustDB:CLSK829079
BioCyc:GSUL243231:GH27-2995-MONOMER TIGRFAMs:TIGR03499
Uniprot:Q3V8C7
Length = 451
Score = 129 (50.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/112 (36%), Positives = 53/112 (47%)
Query: 53 RENVRQVIDF--DEMASG--LNKRRMIQSSVYKELIKLVDP-GVKAHQPQKGKPNVIMFV 107
R +R V+D E G + R +K IK P VK K P +I V
Sbjct: 208 RGAIRAVMDHLKPEARKGGTVEAIRSFLPQAFKSAIKCSGPLTVK-----KNGPRIIALV 262
Query: 108 GLQGSGKTTTCTKLAYHY-LKKNWKACLVCADTFRAGAYDQLKQNATKARIP 158
G G GKTTT KLA HY L++ +A L+ D FR GA +QLK + +P
Sbjct: 263 GPTGVGKTTTIAKLAAHYALREGHRAALITIDNFRVGAVEQLKTYSRIMGVP 314
>TIGR_CMR|GSU_3055 [details] [associations]
symbol:GSU_3055 "flagellar biosynthetic protein FlhF,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0001539
"ciliary or flagellar motility" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0009288 "bacterial-type
flagellum" evidence=ISS] [GO:0009296 "flagellum assembly"
evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR020006 Pfam:PF00448 SMART:SM00382 SMART:SM00962
GO:GO:0005525 GO:GO:0005886 GO:GO:0019861 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 GO:GO:0043064 GO:GO:0006614
KO:K02404 HOGENOM:HOG000254735 RefSeq:NP_954097.2
ProteinModelPortal:Q3V8C7 GeneID:2686907 KEGG:gsu:GSU3055
PATRIC:22028961 OMA:YRNELLV ProtClustDB:CLSK829079
BioCyc:GSUL243231:GH27-2995-MONOMER TIGRFAMs:TIGR03499
Uniprot:Q3V8C7
Length = 451
Score = 129 (50.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/112 (36%), Positives = 53/112 (47%)
Query: 53 RENVRQVIDF--DEMASG--LNKRRMIQSSVYKELIKLVDP-GVKAHQPQKGKPNVIMFV 107
R +R V+D E G + R +K IK P VK K P +I V
Sbjct: 208 RGAIRAVMDHLKPEARKGGTVEAIRSFLPQAFKSAIKCSGPLTVK-----KNGPRIIALV 262
Query: 108 GLQGSGKTTTCTKLAYHY-LKKNWKACLVCADTFRAGAYDQLKQNATKARIP 158
G G GKTTT KLA HY L++ +A L+ D FR GA +QLK + +P
Sbjct: 263 GPTGVGKTTTIAKLAAHYALREGHRAALITIDNFRVGAVEQLKTYSRIMGVP 314
>UNIPROTKB|J9NTJ9 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 Ensembl:ENSCAFT00000045313
Uniprot:J9NTJ9
Length = 637
Score = 129 (50.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/148 (22%), Positives = 74/148 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 323 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 382
Query: 74 MIQSSVYKELIKLVDPGVKAHQ------PQKG-KPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ +P V+ F G+ G GK+T K+++ L
Sbjct: 383 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 442
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 443 ENGFSVLIAACDTFRAGAVEQLRTHTRR 470
>UNIPROTKB|F1PLH3 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 RefSeq:XP_546411.3
Ensembl:ENSCAFT00000016629 GeneID:489293 KEGG:cfa:489293
Uniprot:F1PLH3
Length = 638
Score = 129 (50.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/148 (22%), Positives = 74/148 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 324 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 383
Query: 74 MIQSSVYKELIKLVDPGVKAHQ------PQKG-KPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ +P V+ F G+ G GK+T K+++ L
Sbjct: 384 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 444 ENGFSVLIAACDTFRAGAVEQLRTHTRR 471
>UNIPROTKB|F1S754 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:CU466237 EMBL:FP102836 EMBL:GACC01000039
Ensembl:ENSSSCT00000016593 Uniprot:F1S754
Length = 638
Score = 129 (50.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/148 (22%), Positives = 74/148 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 324 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVASKLEGKVMGTFSTVTS 383
Query: 74 MIQSSVYKELIKLVDPGVKAHQ------PQKG-KPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ +P V+ F G+ G GK+T K+++ L
Sbjct: 384 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 444 ENGFSVLIAACDTFRAGAVEQLRTHTRR 471
>ZFIN|ZDB-GENE-030219-11 [details] [associations]
symbol:srpr "signal recognition particle receptor
(docking protein)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
ZFIN:ZDB-GENE-030219-11 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
CTD:6734 GeneTree:ENSGT00550000074936 EMBL:CU469519 IPI:IPI00799782
RefSeq:XP_697518.3 UniGene:Dr.79180 Ensembl:ENSDART00000086823
GeneID:569063 KEGG:dre:569063 NextBio:20889487 Uniprot:E7EZW6
Length = 650
Score = 129 (50.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/144 (23%), Positives = 73/144 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + + +E + +L ++ L+ +V ++ +L ++V + ++ M +
Sbjct: 336 LKGLVGSKNLTQEDMEPVLDKMKDHLIAKNVAAEIASQLCDSVAKKLEGKVMGTFTTVAS 395
Query: 74 MIQSSVYKELIKLVDP--------GVKAHQPQKGKPNVIMFVGLQGSGKTTTCTKLAYHY 125
++ ++ L++++ P V + Q+ KP VI F G+ G GK+T K++Y
Sbjct: 396 TVKQALQDSLVQILQPKRRVDILRDVLEARSQR-KPFVITFCGVNGVGKSTNLAKISYWL 454
Query: 126 LKKNWKACLVCADTFRAGAYDQLK 149
++ + + DTFRAGA +QL+
Sbjct: 455 IENGFTVLIAACDTFRAGAVEQLR 478
>UNIPROTKB|F1MNJ2 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 IPI:IPI00695733
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:DAAA02063109
Ensembl:ENSBTAT00000018762 Uniprot:F1MNJ2
Length = 598
Score = 128 (50.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 33/148 (22%), Positives = 73/148 (49%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + + E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 325 LKGLVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 384
Query: 74 MIQSSVYKELIKLVDPGVKAHQ------PQKG-KPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ +P V+ F G+ G GK+T K+++ L
Sbjct: 385 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 444
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 445 ENGFSVLIAACDTFRAGAVEQLRTHTRR 472
>UNIPROTKB|J9P788 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:AAEX03003376
EMBL:AAEX03003378 EMBL:AAEX03003377 EMBL:AAEX03003379
Ensembl:ENSCAFT00000047935 Uniprot:J9P788
Length = 773
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 33/148 (22%), Positives = 74/148 (50%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 459 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 518
Query: 74 MIQSSVYKELIKLVDPGVKAHQ------PQKG-KPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ +P V+ F G+ G GK+T K+++ L
Sbjct: 519 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 578
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 579 ENGFSVLIAACDTFRAGAVEQLRTHTRR 606
>UNIPROTKB|Q3MHE8 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
EMBL:BC105264 IPI:IPI00695733 RefSeq:NP_001068590.1 UniGene:Bt.5518
HSSP:P08240 ProteinModelPortal:Q3MHE8 SMR:Q3MHE8 STRING:Q3MHE8
PRIDE:Q3MHE8 GeneID:281504 KEGG:bta:281504 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 InParanoid:Q3MHE8
OrthoDB:EOG4W0XCP NextBio:20805473 Uniprot:Q3MHE8
Length = 639
Score = 128 (50.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 33/148 (22%), Positives = 73/148 (49%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + + E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 325 LKGLVGSKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 384
Query: 74 MIQSSVYKELIKLVDPGVKAHQ------PQKG-KPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ +P V+ F G+ G GK+T K+++ L
Sbjct: 385 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 444
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA +QL+ + +
Sbjct: 445 ENGFSVLIAACDTFRAGAVEQLRTHTRR 472
>TIGR_CMR|CJE_0061 [details] [associations]
symbol:CJE_0061 "flagellar biosynthetic protein FlhF"
species:195099 "Campylobacter jejuni RM1221" [GO:0001539 "ciliary
or flagellar motility" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0017111 GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
RefSeq:YP_178086.1 ProteinModelPortal:Q5HX99 STRING:Q5HX99
GeneID:3230824 KEGG:cjr:CJE0061 PATRIC:20041827 OMA:KVATNEY
BioCyc:CJEJ195099:GJC0-65-MONOMER Uniprot:Q5HX99
Length = 484
Score = 124 (48.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 100 KPNVIMFVGLQGSGKTTTCTKLAYHYL--KKNWKACLVCADTFRAGAYDQLKQNATKARI 157
K ++M VG G GKTTT KLA+ Y K +K ++ DT+R GA +QL Q A ++
Sbjct: 281 KQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQYAKMMKL 340
Query: 158 PFYGSSKGK 166
P S + K
Sbjct: 341 PIIDSIEPK 349
Score = 35 (17.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 23 INEEVLN-SMLKEICAALLEADVNIKLVKK 51
I + LN S L E+ A+ E+D L K+
Sbjct: 36 IRPKTLNRSALYEVMVAIEESDYEEHLKKQ 65
Score = 35 (17.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 5/32 (15%), Positives = 19/32 (59%)
Query: 69 LNKRRMIQSSVYKELIKLVDPGVKAHQPQKGK 100
+ + + +S++Y+ ++ + + + H ++GK
Sbjct: 36 IRPKTLNRSALYEVMVAIEESDYEEHLKKQGK 67
>UNIPROTKB|F1NXV4 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
OMA:LILWSSC GeneTree:ENSGT00550000074936 EMBL:AADN02042027
IPI:IPI00593518 Ensembl:ENSGALT00000001579 Uniprot:F1NXV4
Length = 644
Score = 127 (49.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 36/179 (20%), Positives = 86/179 (48%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + + + ++ +L+++ L+ +V ++ +L E+V + ++ M +
Sbjct: 330 LKGLVGSKSLTRQDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTS 389
Query: 74 MIQSSVYKELIKLVDPGVKAH------QPQKGK-PNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ + P V+ F G+ G GK+T K+++ +
Sbjct: 390 TVKQALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLI 449
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSSKGKRNPIHNMGLSLIPTYEKSF 185
+ + + DTFRAGA +QL+ + + S G G +++ YEK +
Sbjct: 450 ENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHG--------GRTMVQLYEKGY 500
>UNIPROTKB|P06625 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005789 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 Reactome:REACT_146484 GO:GO:0005047
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X03184 PIR:A24570 ProteinModelPortal:P06625 SMR:P06625
STRING:P06625 PRIDE:P06625 InParanoid:P06625 Uniprot:P06625
Length = 638
Score = 121 (47.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 31/148 (20%), Positives = 73/148 (49%)
Query: 14 LRSLSNATVINEEVLNSMLKEICAALLEADVNIKLVKKLRENVRQVIDFDEMASGLNKRR 73
L+ L + ++ E + S+L ++ L+ +V + +L E+V ++ M +
Sbjct: 324 LKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTS 383
Query: 74 MIQSSVYKELIKLVDPGVKAHQ------PQKG-KPNVIMFVGLQGSGKTTTCTKLAYHYL 126
++ ++ + L++++ P + Q+ +P V+ F G+ G GK+T K+++ L
Sbjct: 384 TVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLL 443
Query: 127 KKNWKACLVCADTFRAGAYDQLKQNATK 154
+ + + DTFRAGA + ++ + +
Sbjct: 444 ENGFSVLIAACDTFRAGAVEHVRTHTRR 471
>UNIPROTKB|Q722L6 [details] [associations]
symbol:LMOf2365_0717 "Putative flagellar biosynthesis
protein FlhF" species:265669 "Listeria monocytogenes serotype 4b
str. F2365" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000897 InterPro:IPR020006 Pfam:PF00448 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
TIGRFAMs:TIGR03499 RefSeq:YP_013321.1 ProteinModelPortal:Q722L6
STRING:Q722L6 GeneID:2797398 KEGG:lmf:LMOf2365_0717 PATRIC:20322642
HOGENOM:HOG000254016 OMA:QFHGKKK ProtClustDB:PRK12726
Uniprot:Q722L6
Length = 407
Score = 109 (43.4 bits), Expect = 0.00068, P = 0.00068
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 28 LNSMLKEICAALLEA-DVNIKLVKKLR-ENVRQVIDFDEMASGLNKRRMIQSSVYKELIK 85
L ++ +E+ + E + N VK L+ + D M +G + + ++++ ++
Sbjct: 126 LAALNRELAVKMREEREQNSDFVKFLKGRGISDTYVADFMQAGRKQFKQVETAHLDDITD 185
Query: 86 LVDP---GVKAHQPQKGKPN--VIMFVGLQGSGKTTTCTKLAYHYLKKNWKACLVCADTF 140
P G A + N +I +G G GKTTT KL + LK+N + DTF
Sbjct: 186 WFVPYLSGKLAVEDSFDLSNHRIISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFITTDTF 245
Query: 141 RAGAYDQLKQNATK 154
R+GA +Q + A K
Sbjct: 246 RSGAVEQFQGYADK 259
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 190 0.00091 110 3 11 22 0.44 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 84
No. of states in DFA: 589 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.48u 0.08s 19.56t Elapsed: 00:00:32
Total cpu time: 19.49u 0.08s 19.57t Elapsed: 00:00:32
Start: Thu Aug 15 12:14:18 2013 End: Thu Aug 15 12:14:50 2013