BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4316
(377 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56597|NDK5_HUMAN Nucleoside diphosphate kinase homolog 5 OS=Homo sapiens GN=NME5
PE=2 SV=1
Length = 212
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 119/205 (58%), Gaps = 15/205 (7%)
Query: 163 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
E TLA++KP E+I+ I GFTIV+++ + +PEQ + F++ E+ + P L
Sbjct: 13 EKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYV--EKYGKMFFPNL 70
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
YM SGP+ M+LA+ KAI WL L+GP + AK +P SLRA YG +D+ NA++GS
Sbjct: 71 TAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTDDLRNALHGSN 130
Query: 283 NEEEAARDIRFFFKDIIIEPSNAMESDISCEPSSNSFLAHKIYLREFVYPTLQKGLAELV 342
+ A R+IRF F ++I+EP + A K YL + PTL +GL EL
Sbjct: 131 DFAAAEREIRFMFPEVIVEPIPIGQ-------------AAKDYLNLHIMPTLLEGLTELC 177
Query: 343 RMKPAHSYEWFVNWLLENDPFSPKL 367
+ KPA W +WLL+N+P PKL
Sbjct: 178 KQKPADPLIWLADWLLKNNPNKPKL 202
>sp|Q99MH5|NDK5_MOUSE Nucleoside diphosphate kinase homolog 5 OS=Mus musculus GN=Nme5
PE=2 SV=2
Length = 211
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 116/205 (56%), Gaps = 15/205 (7%)
Query: 163 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
E TLAL+KP E+I+ I GFTI++++ +PE + F++ E+ + P L
Sbjct: 13 EKTLALIKPDVVDKEEEIQDIILGSGFTIIQRRKLHLSPEHCSNFYV--EQYGKMFFPNL 70
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
YM SGP+ M+LA+ KAI W LMGP + AK +P SLRA YG +++ NA++GS
Sbjct: 71 TAYMSSGPLVAMILARHKAISYWKELMGPSNSLVAKETHPDSLRAIYGTDELRNALHGSN 130
Query: 283 NEEEAARDIRFFFKDIIIEPSNAMESDISCEPSSNSFLAHKIYLREFVYPTLQKGLAELV 342
+ + R+IRF F +IIEP + A K Y+ +V PTL +GL EL
Sbjct: 131 DFAASEREIRFMFPAVIIEPIPIGQ-------------AAKDYINLYVAPTLLQGLTELC 177
Query: 343 RMKPAHSYEWFVNWLLENDPFSPKL 367
+ KP Y W +WL++N+P PKL
Sbjct: 178 KEKPPDPYLWLADWLMKNNPNKPKL 202
>sp|P90666|TXND3_HELCR Thioredoxin domain-containing protein 3 homolog OS=Heliocidaris
crassispina GN=NME8 PE=1 SV=1
Length = 837
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 161 CYEYTLALVKPHAFR-HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKV 219
E TLAL++P A + H +++ Q IQE GF + +K + T +QA EF+ +E+
Sbjct: 354 TIEKTLALIRPSALKDHKDEMLQKIQEAGFEVCLQKMVQLTEDQAKEFY--KEQEGTPHF 411
Query: 220 PRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI-MNAI 278
L+ M SG V + LAK+ AI+ W +GP D+AK P SLRA+Y + D +N +
Sbjct: 412 EDLIREMTSGEVLALGLAKESAIQSWREFIGPTTIDEAKEKAPDSLRAQYSIPDTQVNVV 471
Query: 279 YGSRNEEEAARDIRFFF-----------------KDIIIEPSNAMESDISCEPSS--NSF 319
+GS + + A +++ FFF K+ IIE +IS + N
Sbjct: 472 HGSDSVDTAEKELGFFFPKQTTLAVIKPDAAGEHKEAIIEKIKEAGFNISLQRDVELNKE 531
Query: 320 LAHKIYL 326
LA K+YL
Sbjct: 532 LASKLYL 538
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 163 EYTLALVKPHAF-RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPR 221
+ TLA++KP A H E I + I+E GF I ++ + E A++ ++ E ++ +
Sbjct: 491 QTTLAVIKPDAAGEHKEAIIEKIKEAGFNISLQRDVELNKELASKLYLEHEGKEFYE--N 548
Query: 222 LVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGS 281
L+ +M SG VMVL+++ A+ W LMGP DPD A+ P SLRA G + + NA++GS
Sbjct: 549 LIDHMSSGLSMVMVLSREDAVDGWRTLMGPTDPDYAREHAPESLRALLGKDVLQNAVHGS 608
Query: 282 RNEEEAARDIRFFFKDIIIEPSNAMESDISC 312
N EEA I F D+ + P ++ ++
Sbjct: 609 SNPEEAKTRIERLFPDVEVLPGGEVKDSVAS 639
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 8/139 (5%)
Query: 163 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T+ L+KP A HV+ I I+E GF I+ + T ++A EF+ EE + +V
Sbjct: 202 EVTVVLIKPDAVANGHVDSIIAKIEEHGFEILTTEDKTLTEDEAREFYKQHEEEEHFEV- 260
Query: 221 RLVCYMVSGPVRVMVLAK----QKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMN 276
LV +M SGP +++VL + + + +L+GP D + AK P SLRA++G + MN
Sbjct: 261 -LVTFMASGPSKILVLTRGDTGEGVVSEVRNLLGPKDIEVAKEEAPDSLRAQFGTDKKMN 319
Query: 277 AIYGSRNEEEAARDIRFFF 295
A++G+ ++E AAR++ F
Sbjct: 320 AMHGADSKETAAREMAFLL 338
>sp|O75414|NDK6_HUMAN Nucleoside diphosphate kinase 6 OS=Homo sapiens GN=NME6 PE=1 SV=3
Length = 186
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 153 APIVQNLHCYEYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFI 209
A I+++ + TLAL+KP A H +E + Q I F IV+ + + E F+
Sbjct: 2 ASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFY- 60
Query: 210 TREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKY 269
RE RLV +M SGP+R +LA + AI+ W LMGP +A+ + P S+R +
Sbjct: 61 -REHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSF 119
Query: 270 GVNDIMNAIYGSRNEEEAARDIRFFFKDI 298
G+ D N +GS + A+R+I FF D
Sbjct: 120 GLTDTRNTTHGSDSVVSASREIAAFFPDF 148
>sp|Q95YJ5|TXND3_CIOIN Thioredoxin domain-containing protein 3 homolog OS=Ciona
intestinalis GN=CiIC3 PE=2 SV=1
Length = 653
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 163 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
+ T+AL+KP + V++I Q I E G ++ + T E+A +F+ +EE +
Sbjct: 156 QITVALIKPDVVQNGQVDEILQKISEAGIEVLADEERMLTVEEARDFYKNKEEEE--YFD 213
Query: 221 RLVCYMVSGPVRVMVLAK----QKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMN 276
+L+ Y+ SGP RV+VL K + + W ++GP D AK P SLRA YG + N
Sbjct: 214 QLIDYVTSGPCRVLVLTKGESGEGVVTLWRDIIGPFDAAVAKEENPDSLRAIYGTDATSN 273
Query: 277 AIYGSRNEEEAARDIRFFFKD 297
A++GS + EEA R++ FFF D
Sbjct: 274 ALHGSSSTEEAVRELGFFFPD 294
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 163 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
E TLA++KP A E I ++E GF I +K + E A+E + ++E + L
Sbjct: 460 EQTLAVIKPDAIDEKEQIMGKLKEAGFMISCQKDMNLSKEIASEIYKSKEGSE--YYDHL 517
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
+ +M SGP +MVL+ + A+ + +MGP DP+ AK +P SLRA + + + NAI+
Sbjct: 518 IDHMTSGPTLMMVLSAENAVEKLRDIMGPTDPEVAKESHPESLRAMFAKSILENAIHSPS 577
Query: 283 NEEEAARDIRFFFKD 297
E A IR F D
Sbjct: 578 TNESAQEKIRIVFGD 592
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 165 TLALVKPHAFR-HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRLV 223
TLA+++P A + H + I Q I E GF I +K T EQA F+ E +D LV
Sbjct: 327 TLAIIRPDALQAHKDSILQKIDEAGFKIAMQKEMVLTREQAESFY--SEHKDTDYFEPLV 384
Query: 224 CYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI-MNAIYGSR 282
M GPV + LA A+ W ++GP A P SLRA++ V + +N ++GS
Sbjct: 385 KQMTCGPVLALCLAHDDAVDHWRSMLGPKVVADAVEEQPDSLRAQFRVEEAEVNMLHGSD 444
Query: 283 NEEEAARDIRFFF 295
+ E A ++ F
Sbjct: 445 SAEAAEEELSKIF 457
>sp|O88426|NDK6_RAT Nucleoside diphosphate kinase 6 (Fragment) OS=Rattus norvegicus
GN=Nme6 PE=2 SV=1
Length = 175
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 163 EYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKV 219
+ TLAL+KP A H +E + Q I F IV+ + + PE F+ RE
Sbjct: 1 QLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWKPEDCRRFY--REHEGRFFY 58
Query: 220 PRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIY 279
RLV +M SGP+R +LA + AI+ W LMGP +A+ I P S+R G+ D N +
Sbjct: 59 QRLVEFMTSGPIRAYILAHKDAIQLWRTLMGPTRVFRARHIAPDSIRGSLGLTDTRNTTH 118
Query: 280 GSRNEEEAARDIRFFFKDI 298
GS + A+R+I FF D
Sbjct: 119 GSDSVVSASREIAAFFPDF 137
>sp|Q8N427|TXND3_HUMAN Thioredoxin domain-containing protein 3 OS=Homo sapiens GN=NME8
PE=1 SV=2
Length = 588
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Query: 156 VQNLHCYEYTLALVKPHAF-RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREER 214
+Q+ + TL L+KPHA E I + ++E GF + + K TPEQ + + +
Sbjct: 444 IQHFFPLQSTLGLIKPHATSEQREQILKIVKEAGFDLTQVKKMFLTPEQIEKIYPKVTGK 503
Query: 215 DPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI 274
D K L+ + GP VM+L K A+ W LMGP DP++AK + P S+RA++G++ +
Sbjct: 504 DFYK--DLLEMLSVGPSMVMILTKWNAVAEWRRLMGPTDPEEAKLLSPDSIRAQFGISKL 561
Query: 275 MNAIYGSRNEEEAARDIRFFFKD 297
N ++G+ N EA + F+D
Sbjct: 562 KNIVHGASNAYEAKEVVNRLFED 584
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 163 EYTLALVKPHAF-RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPR 221
E TLAL++P+ F +D+ + I+++ F I++++ + ++A E D +
Sbjct: 316 EKTLALLRPNLFHERKDDVLRIIKDEDFKILEQRQVVLSEKEAQALCKEYENEDYFN--K 373
Query: 222 LVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI-MNAIYG 280
L+ M SGP +VL + ++ W L+GP ++A +P SL A++ ++ + +N +YG
Sbjct: 374 LIENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQFAMDSLPVNQLYG 433
Query: 281 SRNEEEAARDIRFFF 295
S + E A R+I+ FF
Sbjct: 434 SDSLETAEREIQHFF 448
>sp|Q715S9|TXND3_RAT Thioredoxin domain-containing protein 3 OS=Rattus norvegicus
GN=Nme8 PE=2 SV=2
Length = 587
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 165 TLALVKPHAFRHVEDIE--QTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
TLAL+KPH H E +E + I++ F + + K TPE A++ + +D K +
Sbjct: 451 TLALIKPHV-SHKERMEILKAIRDARFELTQMKEMHLTPEHASKVYFKITGKDFYK--NV 507
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
+ + SG VM+L K A+ W +MGPVDP++AK + P SLRA+YG++ + NA++G+
Sbjct: 508 LDVLSSGMSVVMILTKWNAVGEWRRMMGPVDPEEAKLLSPNSLRARYGIDVLRNAVHGAS 567
Query: 283 NEEEAARDIRFFFKD 297
N EAA I F +
Sbjct: 568 NMSEAATAISNVFTE 582
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 165 TLALVKPHAFRHVED-IEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRLV 223
TL L+ P +D + IQ +GFTI+ ++ + E+A E+ D L+
Sbjct: 316 TLGLLYPEVCEEEKDNVLDIIQNEGFTILMQRQVVLSEEEARAVCHVHEDED--YFDNLI 373
Query: 224 CYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI-MNAIYGSR 282
YM S ++VL ++ ++ RW L+GP ++A +P SL ++ + +N YGS
Sbjct: 374 GYMCSNNSYILVLMREHSVERWKELIGPKTVEEAYASHPDSLCVRFASGNFPVNQFYGSS 433
Query: 283 NEEEAARDIRFFF 295
++ A +I FF
Sbjct: 434 SKAAAETEIEHFF 446
>sp|Q715T0|TXND3_MOUSE Thioredoxin domain-containing protein 3 OS=Mus musculus GN=Nme8
PE=2 SV=1
Length = 586
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 165 TLALVKPHAFRHVEDIE--QTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
TLAL+KPH H E +E +TI+E GF + K TPE A + + +D K +
Sbjct: 450 TLALIKPHV-THKERMEILKTIKEAGFELTLMKEMHLTPEHANKIYFKITGKDFYK--NV 506
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
+ + G VMVL K A+ W ++GPVDP++AK + P SLRAKYG++ + NA++G+
Sbjct: 507 LEVLSLGMSLVMVLTKWNAVAEWRRMVGPVDPEEAKLLSPESLRAKYGLDILRNAVHGAS 566
Query: 283 NEEEAARDIRFFFKD 297
N EA+ I F +
Sbjct: 567 NFSEASEIISNVFTE 581
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 163 EYTLALVKPHAFRH-VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPR 221
+ TLAL+ P +D+ I +GFTI+ ++ + E+A E +
Sbjct: 313 QTTLALLHPDICEEEKDDVLNVIHNEGFTILMQRQIVLSEEEARTVCKIHENEE--YFDN 370
Query: 222 LVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDI-MNAIYG 280
L+ +M S V+ L ++ + W L+GP ++A +P SL ++ + N YG
Sbjct: 371 LIGHMTSNHSYVLALRRENGVEYWKTLIGPKTIEEAYASHPQSLCVQFASGNFPTNQFYG 430
Query: 281 SRNEEEAARDIRFFF 295
S ++ A ++I FF
Sbjct: 431 SSSKAAAEKEIAHFF 445
>sp|O88425|NDK6_MOUSE Nucleoside diphosphate kinase 6 OS=Mus musculus GN=Nme6 PE=2 SV=1
Length = 189
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 155 IVQNLHCYEYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITR 211
I+++ + TLAL+KP A H +E + Q I F IV+ + ++ E F+ R
Sbjct: 4 ILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRTRELQWKLEDCRRFY--R 61
Query: 212 EERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGV 271
E RLV +M SGP+R +LA + AI+ W LMGP +A+ I P S+R G+
Sbjct: 62 EHEGRFFYQRLVEFMTSGPIRAYILAHKDAIQLWRTLMGPTRVFRARYIAPDSIRGSLGL 121
Query: 272 NDIMNAIYGSRNEEEAARDIRFFFKD 297
D N +GS + A+R+I FF D
Sbjct: 122 TDTRNTTHGSDSVVSASREIAAFFPD 147
>sp|O67528|NDK_AQUAE Nucleoside diphosphate kinase OS=Aquifex aeolicus (strain VF5)
GN=ndk PE=1 SV=1
Length = 142
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 161 CYEYTLALVKPHAFRHV---EDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPV 217
E TL +VKP A + +++ IQE GF I K F+FTPE+A EF+ ER
Sbjct: 2 AVERTLIIVKPDAMEKGALGKILDRFIQE-GFQIKALKMFRFTPEKAGEFYYVHRERPFF 60
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
+ LV +M SGPV VL + AI+R ++GP D ++A+++ P S+RA++G + NA
Sbjct: 61 Q--ELVEFMSSGPVVAAVLEGEDAIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNA 118
Query: 278 IYGSRNEEEAARDIRFFFKDIII 300
I+ S + E A +I F F + I
Sbjct: 119 IHASDSPESAQYEICFIFSGLEI 141
>sp|Q9QXL7|NDK7_RAT Nucleoside diphosphate kinase 7 OS=Rattus norvegicus GN=Nme7 PE=1
SV=1
Length = 395
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 163 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
E TLAL+KP A +I + I + GFTI K + + ++AA+F + R L
Sbjct: 111 EKTLALIKPDAVSKAGEIIEMINKSGFTITKLRMMTLSRKEAADFHVDHHSRPFYN--EL 168
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
+ ++ SGPV M + + AI W L+GP + A+ P S+RA +G + I NA +GS
Sbjct: 169 IQFITSGPVIAMEILRDDAICEWKRLLGPANSGIARSEAPGSVRALFGTDGIRNAAHGSD 228
Query: 283 NEEEAARDIRFFF 295
E AAR++ FF
Sbjct: 229 TFESAAREMELFF 241
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 165 TLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFF-----ITREERDPV 217
T ++KPHA + I I++ F I + F EF+ + + D
Sbjct: 259 TCCIIKPHAISEGMLGKILIAIRDACFEISAIQMFNMDRANVEEFYEVYKGVLSDYND-- 316
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
+V + SGP + + + + + GP DP+ A+ + P +LRA +G + NA
Sbjct: 317 ----MVTELYSGPCVAIEIQQSNPTKTFREFCGPSDPEIARHLRPETLRANFGKTKVQNA 372
Query: 278 IYGSRNEEEAARDIRFFFK 296
++ + E+ ++++FFK
Sbjct: 373 VHCTDLPEDGLLEVQYFFK 391
>sp|Q6DI51|NDK6_DANRE Nucleoside diphosphate kinase 6 OS=Danio rerio GN=nme6 PE=2 SV=1
Length = 175
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 161 CYEYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPV 217
+ TLA++KP A H +E + Q I E F I++KK + + F+ E
Sbjct: 6 ALQLTLAVIKPDAMAHPLILEALHQKILE-NFIIIRKKDLIWRKADSEMFYA--EHSGRF 62
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
RLV +M SGP+R +LA++ AI W +MGP +A+ P +LR KYG+ D N
Sbjct: 63 FFQRLVEFMSSGPMRAYILAREDAITHWRTMMGPTKVFRARFSSPETLRGKYGLTDTRNT 122
Query: 278 IYGSRNEEEAARDIRFFFKDIIIE 301
+GS + E A R+I FFF + E
Sbjct: 123 THGSDSIESAKREISFFFPEFSAE 146
>sp|Q86XW9|TXND6_HUMAN Thioredoxin domain-containing protein 6 OS=Homo sapiens GN=NME9
PE=1 SV=1
Length = 330
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 165 TLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
TLA++KP A H ++I IQE GF I+ + T + F+ + + + +L
Sbjct: 161 TLAIIKPDAVAHGKTDEIIMKIQEAGFEILTNEERTMTEAEVRLFYQHKAGEEAFE--KL 218
Query: 223 VCYMVSGPVRVMVLAKQKA----IRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAI 278
V +M SGP +++L + + + W +MGP DP+ A+R P SLRA+YG NA+
Sbjct: 219 VHHMCSGPSHLLILTRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGTEMPFNAV 278
Query: 279 YGSRNEEEAARDIRFFF 295
+GSR+ E+A R++ F
Sbjct: 279 HGSRDREDADRELALLF 295
>sp|Q5E776|NDK_VIBF1 Nucleoside diphosphate kinase OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=ndk PE=3 SV=1
Length = 144
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T ++VKP A + + I + I++ G IV K + T EQA F+ E ++
Sbjct: 4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFD-- 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV YM+SGPV V VL + A+ R+ LMG +P++A SLRA Y ++ N+++G
Sbjct: 62 ELVAYMMSGPVMVQVLEGENAVVRYRELMGKTNPEEAA---CGSLRADYAISMRYNSVHG 118
Query: 281 SRNEEEAARDIRFFFKDIIIEPSNA 305
+ + E AAR+I +FF + I P A
Sbjct: 119 ADSPESAAREIAYFFAEDEICPRPA 143
>sp|B5FAW8|NDK_VIBFM Nucleoside diphosphate kinase OS=Vibrio fischeri (strain MJ11)
GN=ndk PE=3 SV=1
Length = 144
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T ++VKP A + + I + I++ G IV K + T EQA F+ E ++
Sbjct: 4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFD-- 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV YM+SGPV V VL + A+ R+ LMG +P++A SLRA Y ++ N+++G
Sbjct: 62 ELVAYMMSGPVMVQVLEGENAVVRYRELMGKTNPEEAA---CGSLRADYAISMRYNSVHG 118
Query: 281 SRNEEEAARDIRFFFKDIIIEP 302
+ + E AAR+I +FF + I P
Sbjct: 119 ADSPESAAREIAYFFAEDEICP 140
>sp|B3DL53|NDK6_XENTR Nucleoside diphosphate kinase 6 OS=Xenopus tropicalis GN=nme6 PE=2
SV=1
Length = 179
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 163 EYTLALVKPHAFRH---VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKV 219
+ TLAL+KP A + E + Q I E F I++ K + + F+ E +
Sbjct: 11 QLTLALIKPDAVANPVISEAVHQKILENNFLIIRHKELHWRSTDSQRFYC--EHKGRFFY 68
Query: 220 PRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIY 279
RLV +M SGP++ +LA + A++ W +LMGP +A+ + P ++R G+ D N +
Sbjct: 69 QRLVEFMSSGPMQAYILAHEDAVQLWRNLMGPTKVFRARIVAPGTVRGDLGLTDTRNTTH 128
Query: 280 GSRNEEEAARDIRFFF 295
GS + E A R+I FFF
Sbjct: 129 GSDSVESACREITFFF 144
>sp|B0USF1|NDK_HAES2 Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 2336)
GN=ndk PE=3 SV=1
Length = 141
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TLA++KP A + +I +++KGF I+ K EQA F+ E R+
Sbjct: 4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFY--AEHRNKAFFT 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV YM S P+ V+VL K+ A++ + MG +P+ A+ +LR ++ +N N+++G
Sbjct: 62 ELVKYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAEN---GTLRYEFAINQTQNSVHG 118
Query: 281 SRNEEEAARDIRFFFKD 297
S + E A R+I +FF +
Sbjct: 119 SDSLENAQREIAYFFAE 135
>sp|Q9QXL8|NDK7_MOUSE Nucleoside diphosphate kinase 7 OS=Mus musculus GN=Nme7 PE=2 SV=1
Length = 395
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 163 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
E TLAL+KP A +I + I + GFTI K + T ++AA+F + R L
Sbjct: 111 EKTLALIKPDAVSKAGEIIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYN--EL 168
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
+ ++ SGPV M + + AI W L+GP + ++ P S+RA +G + + NA +G
Sbjct: 169 IQFITSGPVIAMEILRDDAICEWKRLLGPANSGLSRTDAPGSIRALFGTDGVRNAAHGPD 228
Query: 283 NEEEAARDIRFFF 295
AAR++ FF
Sbjct: 229 TFASAAREMELFF 241
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 148 GDEVPAPIVQNLHCYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAA 205
G PA + +C T ++KPHA + I++ F + + F
Sbjct: 245 GGCGPANTAKFTNC---TCCIIKPHAISEGMLGKNLIAIRDACFGMSAIQMFNLDRANVE 301
Query: 206 EFF-----ITREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRI 260
EF+ + E D +V + SGP + + + + + GP DP+ A+ +
Sbjct: 302 EFYEVYKGVVSEYND------MVTELCSGPCVAIEIQQSNPTKTFREFCGPADPEIARHL 355
Query: 261 YPLSLRAKYGVNDIMNAIYGSRNEEEAARDIRFFFK 296
P +LRA +G + NA++ + E+ ++++FFK
Sbjct: 356 RPETLRAIFGKTKVQNAVHCTDLPEDGLLEVQYFFK 391
>sp|Q0I2G6|NDK_HAES1 Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 129Pt)
GN=ndk PE=3 SV=1
Length = 141
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TLA++KP A + +I +++KGF I+ K EQA F+ E D
Sbjct: 4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYT--EHSDKAFFA 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L+ YM S P+ V+VL K+ A++ + MG +P+ A+ +LR ++ +N N+++G
Sbjct: 62 ELIRYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAEN---GTLRYEFAINQTQNSVHG 118
Query: 281 SRNEEEAARDIRFFFKD 297
S + E A R+I +FF +
Sbjct: 119 SDSLENAQREIAYFFAE 135
>sp|B6EGY3|NDK_ALISL Nucleoside diphosphate kinase OS=Aliivibrio salmonicida (strain
LFI1238) GN=ndk PE=3 SV=1
Length = 144
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T ++VKP A + + I + I++ G +V K T EQA F+ E ++
Sbjct: 4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQVVAAKMLSLTKEQAQGFYAEHEGKEFFDA- 62
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV YM SGPV V VL + I R+ LMG +PD+A SLR+ Y ++ N+++G
Sbjct: 63 -LVEYMTSGPVMVQVLEGESVITRYRELMGKTNPDEAA---CGSLRSDYAISMRYNSVHG 118
Query: 281 SRNEEEAARDIRFFF 295
S + E AAR+I +FF
Sbjct: 119 SDSPESAAREIAYFF 133
>sp|C4L7J5|NDK_TOLAT Nucleoside diphosphate kinase OS=Tolumonas auensis (strain DSM 9187
/ TA4) GN=ndk PE=3 SV=1
Length = 143
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T +++KP A + +I + G I+ K + EQAA F+ E +
Sbjct: 4 ERTFSIIKPDAVAKNIIGEIYHRFECAGLHIIAAKMLHLSQEQAAGFYA--EHKGKPFYD 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L+ +M SGP+ V VL Q AIRR L+G DP+KA+ ++RA + ++ NA++G
Sbjct: 62 NLLKFMTSGPIVVQVLEGQDAIRRHRELLGSTDPEKAQ---AGTIRADHAISVTQNAVHG 118
Query: 281 SRNEEEAARDIRFFFKDIIIEP 302
S + E AAR+I FFF + I P
Sbjct: 119 SDSSESAAREIEFFFTEDEICP 140
>sp|Q5E9Y9|NDK7_BOVIN Nucleoside diphosphate kinase 7 OS=Bos taurus GN=NME7 PE=2 SV=1
Length = 377
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 163 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
E TLAL+KP A +I + I + GFT+ K K + ++A +F I + R + L
Sbjct: 92 EKTLALIKPDAVSKAGEIIEIINKAGFTLTKLKMMTLSRKEATDFHIDHQSRPFLN--EL 149
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
+ ++ SGP+ M + + A+ W L+GP + A+ P S+RA +G + I NA +G
Sbjct: 150 IQFITSGPIIAMEILRDDAVCEWKRLLGPANSGLARTDAPESIRALFGTDGIKNAAHGPD 209
Query: 283 NEEEAARDIRFFF 295
+ AAR++ FF
Sbjct: 210 SFACAAREMELFF 222
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 152 PAPIVQNLHCYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFI 209
PA + +C T +VKPHA + I TI++ GF I + F EF+
Sbjct: 230 PANTAKFTNCT--TCCIVKPHAVSEGLLGKILMTIRDAGFEISAMQMFNMDRINVEEFY- 286
Query: 210 TREERDPV--KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRA 267
E V + +V M SGP M + + + GP DP+ A+ + P +LRA
Sbjct: 287 --EVYKGVVSEYNEMVTEMYSGPCVAMEIQQTNPTMTFREFCGPADPEIARHLRPGTLRA 344
Query: 268 KYGVNDIMNAIYGSRNEEEAARDIRFFFK 296
+G I NA++ + E+ ++++FFK
Sbjct: 345 IFGKTKIQNAVHCTDLPEDGLLEVQYFFK 373
>sp|Q3A2Z3|NDK_PELCD Nucleoside diphosphate kinase OS=Pelobacter carbinolicus (strain
DSM 2380 / Gra Bd 1) GN=ndk PE=3 SV=1
Length = 137
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 163 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREER---DPV 217
E TLA++KP AF H I I E+GF ++ K + +QAA F+ E + D +
Sbjct: 2 ERTLAIIKPDAFAAGHAGGILARIYEEGFRVIGMKKLALSEKQAAGFYYVHEGKPFFDDL 61
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
K +M SGP VMVL AIR+W LMG +P A +LR ++G + NA
Sbjct: 62 K-----GFMSSGPCVVMVLEADGAIRKWRDLMGATNPADAA---AGTLRKEFGTSLGRNA 113
Query: 278 IYGSRNEEEAARDIRFFFKDI 298
++GS E AA ++ +FF +
Sbjct: 114 VHGSDAPETAAFEVGYFFAGL 134
>sp|C1DE61|NDK_AZOVD Nucleoside diphosphate kinase OS=Azotobacter vinelandii (strain DJ
/ ATCC BAA-1303) GN=ndk PE=3 SV=1
Length = 143
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 161 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 218
E TL+++KP A + +I ++ G ++V K + + +A F+ +ER K
Sbjct: 2 AVERTLSIIKPDAVAKNVIGEILTRFEKAGLSVVAAKMVQLSEREAGGFYAEHKERPFFK 61
Query: 219 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAI 278
LV +M SGPV V VL + AI + LMG DP KA+ P ++RA + V+ NA+
Sbjct: 62 --DLVSFMTSGPVVVQVLEGEGAIAKNRELMGATDPKKAE---PGTIRADFAVSIDENAV 116
Query: 279 YGSRNEEEAARDIRFFF 295
+GS +E AAR+I +FF
Sbjct: 117 HGSDSEASAAREIAYFF 133
>sp|B8IZ74|NDK_DESDA Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans
(strain ATCC 27774 / DSM 6949) GN=ndk PE=3 SV=1
Length = 139
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
+ T A++KP A +I ++ G IV K + QAA F+ ER P
Sbjct: 3 QSTFAIIKPDAVSRQLTGEILAAMEASGLKIVALKRLHLSKAQAAGFYAVHRER-PF-FD 60
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L YM SGPV +VL + A+ RW LMG +P +A+ P +LRA+YG + NA++G
Sbjct: 61 SLTDYMSSGPVVCVVLRGEDAVPRWRALMGATNPAQAE---PGTLRARYGQSLEANAVHG 117
Query: 281 SRNEEEAARDIRFFFKDIII 300
S +E AA +I +FF + I
Sbjct: 118 SDAQETAAFEIGYFFNGLEI 137
>sp|Q6MGU4|NDK_BDEBA Nucleoside diphosphate kinase OS=Bdellovibrio bacteriovorus (strain
ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) GN=ndk PE=3
SV=1
Length = 141
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T +++KP+A + + DI + G I K T +A EF+ + R P
Sbjct: 4 EQTFSIIKPNAMKKNAIGDIVSMFEANGLKIAAAKITVLTTAKAEEFYAEHKAR-PF-FG 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV +M SGPV +M L + A+ + +MG DP KA P ++RAK+G N NA++G
Sbjct: 62 ELVSFMTSGPVMLMCLQGEGAVLKNREIMGATDPKKAN---PGTVRAKFGDNVGENAVHG 118
Query: 281 SRNEEEAARDIRFFFK 296
S + E AAR++ FF+
Sbjct: 119 SDSPESAARELALFFE 134
>sp|B4EZT7|NDK_PROMH Nucleoside diphosphate kinase OS=Proteus mirabilis (strain HI4320)
GN=ndk PE=3 SV=1
Length = 141
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 165 TLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
T +++KP+A + + I + GF+IV K T EQA F+ E + L
Sbjct: 6 TFSIIKPNAVKKNVIGAIYNRFESAGFSIVAAKMLHLTREQAEGFY--EEHKGRPFFDGL 63
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
V +M SGP+ V VL + AI+R LMG +PD A +LRA Y + NA++GS
Sbjct: 64 VEFMTSGPIMVQVLEGENAIQRHRDLMGATNPDNA---LAGTLRADYADSFTENAVHGSD 120
Query: 283 NEEEAARDIRFFFKDIIIEP 302
+E AAR+I +FF + I P
Sbjct: 121 SEASAAREIAYFFTENEICP 140
>sp|Q87S20|NDK_VIBPA Nucleoside diphosphate kinase OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=ndk PE=3 SV=1
Length = 141
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 161 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERD--- 215
E T ++VKP A + +I I++ G I+ K T EQA+ F+ E ++
Sbjct: 2 ALERTFSIVKPDAVERNLIGEIYNRIEKAGLRIIAAKMVHLTEEQASGFYAEHEGKEFFQ 61
Query: 216 PVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIM 275
P+K +M SGP+ V VL + AI R+ LMG +P++A +LRA Y ++
Sbjct: 62 PLKE-----FMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA---AGTLRADYALSMRH 113
Query: 276 NAIYGSRNEEEAARDIRFFFKDIIIEP 302
N+++GS + E AAR+I FFF + I P
Sbjct: 114 NSVHGSDSPESAAREIEFFFPESEICP 140
>sp|Q5L6Z2|NDK_CHLAB Nucleoside diphosphate kinase OS=Chlamydophila abortus (strain
S26/3) GN=ndk PE=3 SV=1
Length = 141
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 163 EYTLALVKPHAF--RHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TL+++KP + H+ +I ++ GF I K + ++A F+ + R +
Sbjct: 2 EQTLSIIKPDSVGKAHIGEIIAIFEKSGFRIAAMKMLHLSVKEAEGFYAVHKSRPFFQ-- 59
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV +M+SGPV VMVL A+ R +MG +P +A P ++RA++G + +NA++G
Sbjct: 60 ELVDFMISGPVVVMVLEGNNAVARNREIMGATNPQEAA---PGTIRAQFGESIGINAVHG 116
Query: 281 SRNEEEAARDIRFFFKDIIIEPSNA 305
S + E AA +I +FF + I S A
Sbjct: 117 SDSLENAAIEINYFFSKVEIVNSAA 141
>sp|A7MU38|NDK_VIBHB Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=ndk PE=3 SV=1
Length = 141
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T ++VKP A + +I I++ G IV K T EQA+ F+ E + P P
Sbjct: 4 ERTFSIVKPDAVERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGK-PF-FP 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L +M SGP+ V VL + AI R+ LMG +P++A ++RA Y ++ N+++G
Sbjct: 62 ALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAA---CGTIRADYALSMRHNSVHG 118
Query: 281 SRNEEEAARDIRFFFKDIIIEP 302
S + E AAR+I FFF + I P
Sbjct: 119 SDSPESAAREIEFFFPESEICP 140
>sp|B6IN60|NDK_RHOCS Nucleoside diphosphate kinase OS=Rhodospirillum centenum (strain
ATCC 51521 / SW) GN=ndk PE=3 SV=1
Length = 140
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 161 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 218
E TL++VKP A R I +E G IV +K + T EQA +F+I ER P
Sbjct: 2 AVERTLSIVKPDATRRNLTGKINARFEEAGLRIVAQKRIRLTREQAEQFYIVHAER-PF- 59
Query: 219 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAI 278
LV +M+SGPV V VL + A+ R +MG +P A P ++R + + N++
Sbjct: 60 YGELVSFMISGPVVVQVLEGENAVARNREIMGATNPANAA---PGTIRKDFAESIEANSV 116
Query: 279 YGSRNEEEAARDIRFFF 295
+GS + E AA +I +FF
Sbjct: 117 HGSDSLENAATEIAYFF 133
>sp|Q9Y5B8|NDK7_HUMAN Nucleoside diphosphate kinase 7 OS=Homo sapiens GN=NME7 PE=1 SV=1
Length = 376
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 163 EYTLALVKPHAFRHVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVPRL 222
E TLAL+KP A +I + I + GFTI K K + ++A +F + + R L
Sbjct: 92 EKTLALIKPDAISKAGEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSRPFFN--EL 149
Query: 223 VCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYGSR 282
+ ++ +GP+ M + + AI W L+GP + A+ S+RA +G + I NA +G
Sbjct: 150 IQFITTGPIIAMEILRDDAICEWKRLLGPANSGVARTDASESIRALFGTDGIRNAAHGPD 209
Query: 283 NEEEAARDIRFFF 295
+ AAR++ FF
Sbjct: 210 SFASAAREMELFF 222
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 152 PAPIVQNLHCYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFF- 208
PA + +C T +VKPHA + I I++ GF I + F EF+
Sbjct: 230 PANTAKFTNC---TCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYE 286
Query: 209 ----ITREERDPVKVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLS 264
+ E D +V M SGP M + + A + + GP DP+ A+ + P +
Sbjct: 287 VYKGVVTEYHD------MVTEMYSGPCVAMEIQQNNATKTFREFCGPADPEIARHLRPGT 340
Query: 265 LRAKYGVNDIMNAIYGSRNEEEAARDIRFFFK 296
LRA +G I NA++ + E+ ++++FFK
Sbjct: 341 LRAIFGKTKIQNAVHCTDLPEDGLLEVQYFFK 372
>sp|B7VJT4|NDK_VIBSL Nucleoside diphosphate kinase OS=Vibrio splendidus (strain LGP32)
GN=ndk PE=3 SV=1
Length = 144
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 13/148 (8%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERD---PV 217
E T ++VKP A + V +I I++ G I+ K T QA+ F+ E ++ P+
Sbjct: 4 ERTFSIVKPDAVKRNLVGEIYHRIEKAGLQIIAAKMVSLTEAQASGFYAEHEGKEFFGPL 63
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
K +M SGP+ V VL + AI R+ LMG +P++A ++RA Y ++ N+
Sbjct: 64 KE-----FMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA---CGTIRADYAISMRYNS 115
Query: 278 IYGSRNEEEAARDIRFFFKDIIIEPSNA 305
++GS + E AAR+I FFF + I P A
Sbjct: 116 VHGSDSPESAAREIEFFFPESEICPRPA 143
>sp|B3PDL7|NDK_CELJU Nucleoside diphosphate kinase OS=Cellvibrio japonicus (strain
Ueda107) GN=ndk PE=3 SV=1
Length = 141
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 161 CYEYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 218
E T +++KP A + H+ I ++ G ++ ++ + TP QA F+ + R
Sbjct: 2 AVEQTFSIIKPDAVKNNHIGAIVARFEKAGLKVIAQRMLQLTPAQAEGFYAEHKGRSFYD 61
Query: 219 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAI 278
LV +M SGPV V VL + AI LMG DP KA P ++RA + ++ NA+
Sbjct: 62 --ELVAFMTSGPVVVQVLYGENAIALNRELMGATDPTKAA---PGTIRADFSMSMPANAV 116
Query: 279 YGSRNEEEAARDIRFFF 295
+GS + AAR+I +FF
Sbjct: 117 HGSDSPISAAREIAYFF 133
>sp|Q3YQT1|NDK_EHRCJ Nucleoside diphosphate kinase OS=Ehrlichia canis (strain Jake)
GN=ndk PE=3 SV=2
Length = 141
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TL+++KP + + I+ G IV +K T QA EF+ + + +P
Sbjct: 3 ERTLSILKPDVVKRNITGQVNSYIENSGLKIVTQKMCLLTRFQAEEFYAIHKSQHFF-IP 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV +MVSGP+ V VL + AI + LMG DP KA P ++R + N N ++G
Sbjct: 62 -LVDFMVSGPIIVQVLEGENAISLYRELMGATDPKKAN---PGTIRGDFAENIDANCVHG 117
Query: 281 SRNEEEAARDIRFFFKD 297
S + + A R+IRFFF D
Sbjct: 118 SDSLDNAVREIRFFFSD 134
>sp|Q6MEA9|NDK1_PARUW Nucleoside diphosphate kinase 1 OS=Protochlamydia amoebophila
(strain UWE25) GN=ndk1 PE=3 SV=2
Length = 141
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Query: 163 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TL+++KP A + ++ +I ++ G I K T +QA++F+ ++R P
Sbjct: 4 EQTLSIIKPDAVQNNYIGEIISRFEQAGLKIAAIKMTTLTKDQASKFYAIHKDR-PF-YN 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV +M SGPV VMVL +AI + LMG DP KA++ +LRA + + NA++G
Sbjct: 62 DLVNFMSSGPVVVMVLEGNQAIAKNRELMGATDPKKAEK---GTLRADFAESMSRNAVHG 118
Query: 281 SRNEEEAARDIRFFFK 296
S + E A ++ FFFK
Sbjct: 119 SDSSETAEEEVLFFFK 134
>sp|Q2GF82|NDK_EHRCR Nucleoside diphosphate kinase OS=Ehrlichia chaffeensis (strain
Arkansas) GN=ndk PE=3 SV=1
Length = 142
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TL+++KP + + I+ G I+ +K T QA EF+ + + VP
Sbjct: 3 EKTLSILKPDVIKRNITGQVNSYIENSGLKIIIQKMCLLTRCQAEEFYAIHKSQHFF-VP 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L+ +MVSGP+ V VL + AI + +MG DP KA P ++RA + N N ++G
Sbjct: 62 -LIDFMVSGPIIVQVLQGENAISLYREIMGATDPKKAS---PGTIRADFAENIDANCVHG 117
Query: 281 SRNEEEAARDIRFFFKD 297
S + + A R+IRFFF D
Sbjct: 118 SDSLDNAMREIRFFFSD 134
>sp|Q9Z7T5|NDK_CHLPN Nucleoside diphosphate kinase OS=Chlamydia pneumoniae GN=ndk PE=3
SV=1
Length = 144
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Query: 163 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TL+++KP + H+ +I ++ G I K + +A F+ ER +
Sbjct: 2 EQTLSIIKPDSVSKAHIGEILSIFEQSGLRIAAMKMMHLSQTEAEGFYFVHRERPFFQ-- 59
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV +MVSGPV V+VL A+ R LMG +P +A ++RAK+G + +NA++G
Sbjct: 60 ELVDFMVSGPVVVLVLEGANAVSRNRELMGATNPAEAA---SGTIRAKFGESIGVNAVHG 116
Query: 281 SRNEEEAARDIRFFFKDI 298
S E AA +I +FF I
Sbjct: 117 SDTLENAAVEIAYFFSKI 134
>sp|A7I3D2|NDK_CAMHC Nucleoside diphosphate kinase OS=Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ndk PE=3
SV=1
Length = 137
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
+ TL+++KP A + I + G I K K + A++F+ +ER
Sbjct: 2 QQTLSIIKPDAVEKGVIGKIIDRFESAGLRIAAAKKIKLSKCDASQFYAIHKERSFFN-- 59
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV YM SGPV VMVL + A+ + LMG DP KA P ++RA + + NA++G
Sbjct: 60 DLVDYMTSGPVVVMVLEGENAVAKNRELMGATDPKKAA---PGTIRADFAESIDANAVHG 116
Query: 281 SRNEEEAARDIRFFF 295
S +EE A +I FFF
Sbjct: 117 SDSEENAKNEIAFFF 131
>sp|Q2NS36|NDK_SODGM Nucleoside diphosphate kinase OS=Sodalis glossinidius (strain
morsitans) GN=ndk PE=3 SV=1
Length = 143
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T +++KP+A + I Q + G T+V K + T EQA F+ E +
Sbjct: 4 ERTFSIIKPNAVAKNVIGAIIQRFESTGLTVVGAKMLQLTREQAEGFYA--EHKGKPFFD 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV +M+SGP+ V VL + A+RR +MG + A +LRA Y + NA++G
Sbjct: 62 SLVDFMISGPILVQVLEGEDAVRRNREIMGATNLANA---LAGTLRADYADSFTENAVHG 118
Query: 281 SRNEEEAARDIRFFFKD 297
S + E AAR+I +FF D
Sbjct: 119 SDSAESAAREIAYFFAD 135
>sp|A5FY40|NDK_ACICJ Nucleoside diphosphate kinase OS=Acidiphilium cryptum (strain JF-5)
GN=ndk PE=3 SV=1
Length = 140
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Query: 161 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 218
E TL+++KP A R I +E G IV +K + T +QA F+ +ER P
Sbjct: 2 ATERTLSIIKPDATRRNLTGRINAKFEEAGLRIVAQKRIRLTKDQAEAFYGVHKER-PF- 59
Query: 219 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAI 278
LV +M SGPV V VL A+ R +MG DP KA+ ++RA++ + N++
Sbjct: 60 FAGLVSFMTSGPVVVQVLEGDDAVARNRAIMGATDPRKAE---AGTIRAEFAEDIEANSV 116
Query: 279 YGSRNEEEAARDIRFFFKDIII 300
+GS + AA++I FFF + I
Sbjct: 117 HGSDAADTAAQEIAFFFAGVEI 138
>sp|C3LT09|NDK_VIBCM Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1
(strain M66-2) GN=ndk PE=3 SV=1
Length = 142
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREER---DPV 217
E T +++KP A + + +I I++ G I+ K + EQA+ F+ E + +P+
Sbjct: 4 ERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPL 63
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
K +M SGP+ V VL + AI R+ LMG +P++A +LRA Y ++ N+
Sbjct: 64 KE-----FMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA---CGTLRADYALSMRYNS 115
Query: 278 IYGSRNEEEAARDIRFFFKDIIIEP 302
++GS + AAR+I FFF + I P
Sbjct: 116 VHGSDSPASAAREIEFFFPESEICP 140
>sp|Q9KTX4|NDK_VIBCH Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=ndk PE=3
SV=1
Length = 142
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREER---DPV 217
E T +++KP A + + +I I++ G I+ K + EQA+ F+ E + +P+
Sbjct: 4 ERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPL 63
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
K +M SGP+ V VL + AI R+ LMG +P++A +LRA Y ++ N+
Sbjct: 64 KE-----FMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA---CGTLRADYALSMRYNS 115
Query: 278 IYGSRNEEEAARDIRFFFKDIIIEP 302
++GS + AAR+I FFF + I P
Sbjct: 116 VHGSDSPASAAREIEFFFPESEICP 140
>sp|A5F3F7|NDK_VIBC3 Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=ndk PE=3 SV=1
Length = 142
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREER---DPV 217
E T +++KP A + + +I I++ G I+ K + EQA+ F+ E + +P+
Sbjct: 4 ERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPL 63
Query: 218 KVPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNA 277
K +M SGP+ V VL + AI R+ LMG +P++A +LRA Y ++ N+
Sbjct: 64 KE-----FMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA---CGTLRADYALSMRYNS 115
Query: 278 IYGSRNEEEAARDIRFFFKDIIIEP 302
++GS + AAR+I FFF + I P
Sbjct: 116 VHGSDSPASAAREIEFFFPESEICP 140
>sp|B0SJT4|NDK_LEPBP Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / ATCC 23582 / Paris) GN=ndk PE=3 SV=1
Length = 137
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 163 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T ++KP A + H+ DI Q I+++GF I+ K K + E A +F+ R P
Sbjct: 2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAAR-PF-YN 59
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L YM SGP+ L + A+ W ++G DP +AK ++RA + + NA++G
Sbjct: 60 DLCTYMASGPIVACALERDNAVAHWRDVIGATDPKEAK---AGTIRALFAESKEANAVHG 116
Query: 281 SRNEEEAARDIRFFFK 296
S + A ++I FFFK
Sbjct: 117 SDSVANALQEIAFFFK 132
>sp|B0S9J3|NDK_LEPBA Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / Ames) GN=ndk PE=3 SV=1
Length = 137
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 163 EYTLALVKPHAFR--HVEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T ++KP A + H+ DI Q I+++GF I+ K K + E A +F+ R P
Sbjct: 2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAAR-PF-YN 59
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L YM SGP+ L + A+ W ++G DP +AK ++RA + + NA++G
Sbjct: 60 DLCTYMASGPIVACALERDNAVAHWRDVIGATDPKEAK---AGTIRALFAESKEANAVHG 116
Query: 281 SRNEEEAARDIRFFFK 296
S + A ++I FFFK
Sbjct: 117 SDSVANALQEIAFFFK 132
>sp|A6VV02|NDK_MARMS Nucleoside diphosphate kinase OS=Marinomonas sp. (strain MWYL1)
GN=ndk PE=3 SV=1
Length = 135
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 161 CYEYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVK 218
E TL+++KP A + +I + GF IV+ K + E A F+ +ER K
Sbjct: 2 ALERTLSIIKPDAVAKNVIGEIYTRFERAGFKIVEAKMIQLDDELAGGFYAEHKERPFYK 61
Query: 219 VPRLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAI 278
LV +M SGPV V VL + A+ R LMG +P +A +LRA Y + NA+
Sbjct: 62 --DLVAFMTSGPVVVSVLEGEGAVLRHRELMGATNPKEAA---AGTLRADYATSIDANAV 116
Query: 279 YGSRNEEEAARDIRFFF 295
+GS + E A R+I +FF
Sbjct: 117 HGSDSVESATREIAYFF 133
>sp|Q3JCN5|NDK_NITOC Nucleoside diphosphate kinase OS=Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848) GN=ndk PE=3 SV=1
Length = 143
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E TL+++KP A + +I + G IV + + EQA EF+ ++R
Sbjct: 4 ERTLSIIKPDAVAKNIIGEIYTRFENAGLRIVAARMLHLSKEQAQEFYTVHKDRPFYN-- 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
LV +M SGPV V VL + AI R +MG +P +A P ++RA + N NA++G
Sbjct: 62 DLVGFMTSGPVMVQVLEGENAIARNREIMGATNPKEA---VPGTIRADFAENIDANAVHG 118
Query: 281 SRNEEEAARDIRFFFK 296
S A ++I FFFK
Sbjct: 119 SDGSGTAEQEINFFFK 134
>sp|Q7MNF4|NDK_VIBVY Nucleoside diphosphate kinase OS=Vibrio vulnificus (strain YJ016)
GN=ndk PE=3 SV=1
Length = 141
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 163 EYTLALVKPHAFRH--VEDIEQTIQEKGFTIVKKKTFKFTPEQAAEFFITREERDPVKVP 220
E T +++KP A + +I I++ G I+ K EQA+ F+ E ++ P
Sbjct: 4 ERTFSIIKPDAVERNLIGEIYHRIEKAGLRIIAAKMVHLNDEQASGFYAEHEGKE--FFP 61
Query: 221 RLVCYMVSGPVRVMVLAKQKAIRRWLHLMGPVDPDKAKRIYPLSLRAKYGVNDIMNAIYG 280
L +M SGP+ V VL + AI R+ LMG +P++A ++RA Y ++ N+++G
Sbjct: 62 ALKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAA---CGTIRADYALSMRHNSVHG 118
Query: 281 SRNEEEAARDIRFFFKDIIIEP 302
S + AAR+I FFF + I P
Sbjct: 119 SDSPASAAREIAFFFPESEICP 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,612,083
Number of Sequences: 539616
Number of extensions: 6541525
Number of successful extensions: 22040
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 422
Number of HSP's that attempted gapping in prelim test: 20955
Number of HSP's gapped (non-prelim): 752
length of query: 377
length of database: 191,569,459
effective HSP length: 119
effective length of query: 258
effective length of database: 127,355,155
effective search space: 32857629990
effective search space used: 32857629990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)