Query psy4317
Match_columns 235
No_of_seqs 199 out of 1845
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 22:27:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4317.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4317hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00151 Lipase: Lipase; Inte 100.0 1.5E-58 3.2E-63 409.8 11.4 220 12-233 30-266 (331)
2 TIGR03230 lipo_lipase lipoprot 100.0 2.8E-54 6.1E-59 392.5 20.4 214 16-233 3-243 (442)
3 cd00707 Pancreat_lipase_like P 100.0 1.4E-53 3.1E-58 370.2 20.5 211 19-233 2-220 (275)
4 PLN02824 hydrolase, alpha/beta 99.7 1.2E-15 2.5E-20 132.6 12.6 106 52-168 28-139 (294)
5 PRK00870 haloalkane dehalogena 99.6 2.9E-15 6.2E-20 130.9 11.5 106 52-167 45-151 (302)
6 PRK11126 2-succinyl-6-hydroxy- 99.6 8.3E-15 1.8E-19 123.0 11.2 102 52-166 1-102 (242)
7 TIGR02240 PHA_depoly_arom poly 99.6 5.3E-15 1.1E-19 127.5 9.7 105 51-167 23-127 (276)
8 PLN02965 Probable pheophorbida 99.6 8.4E-15 1.8E-19 124.9 10.6 102 55-166 5-107 (255)
9 PLN02298 hydrolase, alpha/beta 99.6 1.5E-14 3.3E-19 127.9 12.3 149 14-166 7-169 (330)
10 PLN02385 hydrolase; alpha/beta 99.6 2E-14 4.4E-19 128.3 11.8 112 51-166 85-197 (349)
11 TIGR03611 RutD pyrimidine util 99.6 2.8E-14 6.1E-19 119.2 10.9 105 51-166 11-115 (257)
12 PRK10673 acyl-CoA esterase; Pr 99.6 2.9E-14 6.2E-19 120.5 10.8 102 51-165 14-115 (255)
13 TIGR03056 bchO_mg_che_rel puta 99.6 4.5E-14 9.8E-19 120.2 11.8 104 52-166 27-130 (278)
14 PLN02211 methyl indole-3-aceta 99.5 4.4E-14 9.6E-19 122.4 11.5 108 50-166 15-122 (273)
15 PF12697 Abhydrolase_6: Alpha/ 99.5 4E-14 8.7E-19 115.0 10.5 101 56-167 1-102 (228)
16 PRK03592 haloalkane dehalogena 99.5 3.8E-14 8.2E-19 123.2 10.6 102 52-165 26-127 (295)
17 PLN02679 hydrolase, alpha/beta 99.5 4E-14 8.6E-19 127.3 10.5 104 53-167 88-192 (360)
18 TIGR03343 biphenyl_bphD 2-hydr 99.5 4.2E-14 9.1E-19 121.4 9.9 106 52-166 29-136 (282)
19 TIGR01250 pro_imino_pep_2 prol 99.5 1.8E-13 3.8E-18 115.9 11.8 106 52-166 24-131 (288)
20 PHA02857 monoglyceride lipase; 99.5 1.7E-13 3.8E-18 117.7 11.8 108 52-165 24-131 (276)
21 PRK10349 carboxylesterase BioH 99.5 1.1E-13 2.4E-18 117.6 9.9 98 51-165 11-108 (256)
22 PLN03087 BODYGUARD 1 domain co 99.5 1.4E-13 3E-18 127.9 10.8 106 52-165 200-308 (481)
23 TIGR02427 protocat_pcaD 3-oxoa 99.5 1.2E-13 2.7E-18 114.1 9.5 103 52-166 12-114 (251)
24 PRK03204 haloalkane dehalogena 99.5 1.8E-13 3.8E-18 119.2 10.1 103 52-165 33-135 (286)
25 TIGR03695 menH_SHCHC 2-succiny 99.5 2.5E-13 5.5E-18 111.9 10.5 103 53-166 1-105 (251)
26 PLN02578 hydrolase 99.5 2.2E-13 4.8E-18 122.1 10.8 104 52-167 85-188 (354)
27 PRK10749 lysophospholipase L2; 99.5 3.5E-13 7.5E-18 119.7 11.9 110 51-166 52-166 (330)
28 PRK06489 hypothetical protein; 99.5 3.2E-13 7E-18 121.2 10.2 104 53-165 69-188 (360)
29 TIGR03101 hydr2_PEP hydrolase, 99.4 1.4E-12 3E-17 112.8 12.4 110 52-167 24-135 (266)
30 PLN03084 alpha/beta hydrolase 99.4 8.8E-13 1.9E-17 119.7 10.4 105 52-167 126-233 (383)
31 PLN02511 hydrolase 99.4 1.2E-12 2.6E-17 119.0 11.1 112 50-164 97-208 (388)
32 PRK08775 homoserine O-acetyltr 99.4 5.2E-13 1.1E-17 119.1 7.9 103 53-166 57-173 (343)
33 KOG4409|consensus 99.4 4.2E-13 9E-18 117.8 6.9 107 50-168 87-197 (365)
34 PLN02894 hydrolase, alpha/beta 99.4 2.4E-12 5.2E-17 117.5 11.8 106 51-167 103-212 (402)
35 TIGR01738 bioH putative pimelo 99.4 1.4E-12 2.9E-17 107.7 8.9 98 52-166 3-100 (245)
36 PRK14875 acetoin dehydrogenase 99.4 3.2E-12 6.8E-17 114.1 10.9 104 51-166 129-232 (371)
37 KOG4178|consensus 99.4 6.2E-12 1.3E-16 109.8 12.0 109 49-167 40-149 (322)
38 TIGR01392 homoserO_Ac_trn homo 99.4 1.3E-12 2.9E-17 116.8 7.8 107 52-166 30-162 (351)
39 TIGR01249 pro_imino_pep_1 prol 99.3 8.4E-12 1.8E-16 109.5 11.5 103 52-165 26-129 (306)
40 PRK10985 putative hydrolase; P 99.3 9.1E-12 2E-16 110.3 11.6 112 51-165 56-167 (324)
41 PLN02652 hydrolase; alpha/beta 99.3 1.2E-11 2.7E-16 112.6 11.3 111 51-166 134-245 (395)
42 PRK00175 metX homoserine O-ace 99.3 6.8E-12 1.5E-16 113.6 8.9 107 53-167 48-183 (379)
43 PRK11071 esterase YqiA; Provis 99.3 1.2E-11 2.7E-16 101.8 9.5 91 54-167 2-94 (190)
44 KOG1454|consensus 99.3 2.4E-11 5.1E-16 108.1 10.0 104 51-163 56-160 (326)
45 PLN00021 chlorophyllase 99.3 3.7E-11 7.9E-16 106.3 10.9 114 50-167 49-167 (313)
46 PRK10566 esterase; Provisional 99.3 5.7E-11 1.2E-15 100.5 11.2 99 51-152 25-130 (249)
47 PRK07581 hypothetical protein; 99.2 1.5E-11 3.3E-16 109.2 7.7 109 53-166 41-159 (339)
48 COG2267 PldB Lysophospholipase 99.2 4.8E-11 1E-15 104.9 10.2 109 54-168 35-144 (298)
49 PF12695 Abhydrolase_5: Alpha/ 99.2 4.3E-11 9.4E-16 92.4 8.7 93 55-164 1-93 (145)
50 PLN02980 2-oxoglutarate decarb 99.2 5.9E-11 1.3E-15 124.4 10.7 103 52-165 1370-1479(1655)
51 KOG2564|consensus 99.2 9.9E-11 2.2E-15 100.1 9.9 108 50-164 71-180 (343)
52 TIGR03100 hydr1_PEP hydrolase, 99.2 3.4E-10 7.3E-15 98.1 13.1 108 52-166 25-134 (274)
53 PF05990 DUF900: Alpha/beta hy 99.2 2E-10 4.4E-15 97.6 10.1 116 50-168 15-139 (233)
54 PRK13604 luxD acyl transferase 99.2 2.5E-10 5.3E-15 100.2 10.8 107 50-167 34-142 (307)
55 PRK05077 frsA fermentation/res 99.1 2.9E-10 6.2E-15 104.3 11.0 108 51-166 192-300 (414)
56 COG1647 Esterase/lipase [Gener 99.1 3.8E-10 8.1E-15 93.7 10.5 110 48-168 10-120 (243)
57 KOG1455|consensus 99.1 1.1E-09 2.5E-14 94.7 13.0 114 51-168 52-166 (313)
58 PRK05855 short chain dehydroge 99.1 3.1E-10 6.8E-15 106.9 10.4 90 51-149 23-114 (582)
59 cd00741 Lipase Lipase. Lipase 99.1 5.5E-10 1.2E-14 88.4 10.0 108 110-220 10-125 (153)
60 TIGR01840 esterase_phb esteras 99.1 3.1E-10 6.8E-15 94.5 8.5 110 51-164 11-128 (212)
61 COG0429 Predicted hydrolase of 99.1 6.4E-10 1.4E-14 97.4 10.5 99 50-151 72-171 (345)
62 TIGR02821 fghA_ester_D S-formy 99.1 1.6E-09 3.5E-14 93.9 11.4 109 52-165 41-172 (275)
63 TIGR01607 PST-A Plasmodium sub 99.1 1.1E-09 2.3E-14 97.7 10.2 113 52-165 20-184 (332)
64 PF00561 Abhydrolase_1: alpha/ 99.0 7.6E-10 1.6E-14 91.0 8.0 75 84-165 1-78 (230)
65 PF07859 Abhydrolase_3: alpha/ 99.0 5.8E-10 1.2E-14 92.1 7.3 106 56-166 1-110 (211)
66 COG0596 MhpC Predicted hydrola 99.0 1.7E-09 3.7E-14 88.1 9.9 103 53-167 21-124 (282)
67 TIGR01836 PHA_synth_III_C poly 99.0 1.1E-09 2.4E-14 97.9 9.2 107 53-167 62-172 (350)
68 PF07819 PGAP1: PGAP1-like pro 99.0 3E-09 6.6E-14 89.9 10.5 111 52-164 3-121 (225)
69 PLN02872 triacylglycerol lipas 99.0 7.4E-10 1.6E-14 101.0 6.8 113 51-168 72-199 (395)
70 PRK10162 acetyl esterase; Prov 99.0 3.5E-09 7.5E-14 93.8 10.9 110 52-167 80-196 (318)
71 PLN02442 S-formylglutathione h 99.0 2.2E-09 4.9E-14 93.5 9.4 111 50-165 44-177 (283)
72 KOG2382|consensus 99.0 2.8E-09 6.1E-14 93.2 9.0 108 51-165 50-158 (315)
73 PRK11460 putative hydrolase; P 99.0 6.7E-09 1.5E-13 88.0 10.9 110 50-164 13-136 (232)
74 PF00975 Thioesterase: Thioest 99.0 5.7E-09 1.2E-13 87.1 10.4 106 54-169 1-107 (229)
75 PF02230 Abhydrolase_2: Phosph 98.9 1E-08 2.2E-13 85.7 11.3 140 50-195 11-167 (216)
76 PF01674 Lipase_2: Lipase (cla 98.9 5.4E-09 1.2E-13 87.9 8.0 92 54-150 2-96 (219)
77 PF06342 DUF1057: Alpha/beta h 98.9 2.5E-08 5.4E-13 85.9 11.2 108 52-170 34-141 (297)
78 PRK07868 acyl-CoA synthetase; 98.9 1.9E-08 4.2E-13 101.5 12.3 107 52-165 66-176 (994)
79 TIGR00976 /NonD putative hydro 98.9 1.1E-08 2.3E-13 97.1 9.8 112 52-169 21-135 (550)
80 TIGR03502 lipase_Pla1_cef extr 98.8 2.2E-08 4.9E-13 97.5 11.0 95 52-149 448-575 (792)
81 COG0657 Aes Esterase/lipase [L 98.8 3E-08 6.5E-13 87.2 10.6 111 50-165 76-190 (312)
82 TIGR01838 PHA_synth_I poly(R)- 98.8 7.3E-08 1.6E-12 90.8 13.3 105 52-165 187-301 (532)
83 PF06821 Ser_hydrolase: Serine 98.8 2.8E-08 6.1E-13 80.6 9.0 90 56-167 1-92 (171)
84 PRK06765 homoserine O-acetyltr 98.8 2.1E-08 4.6E-13 91.3 7.9 107 52-165 55-195 (389)
85 PF12740 Chlorophyllase2: Chlo 98.7 3.7E-08 8E-13 84.5 8.5 110 50-166 14-131 (259)
86 PF07224 Chlorophyllase: Chlor 98.7 9.2E-08 2E-12 81.5 10.0 118 48-170 41-161 (307)
87 KOG1838|consensus 98.7 9.2E-08 2E-12 86.5 10.2 93 51-149 123-219 (409)
88 COG4782 Uncharacterized protei 98.7 1.2E-07 2.6E-12 84.1 10.4 114 49-165 112-233 (377)
89 KOG4627|consensus 98.7 9.1E-08 2E-12 78.9 8.4 103 50-162 64-168 (270)
90 KOG1515|consensus 98.7 3.9E-07 8.4E-12 81.3 12.7 117 51-171 88-212 (336)
91 PF05728 UPF0227: Uncharacteri 98.6 3.1E-07 6.7E-12 75.5 9.2 89 56-167 2-92 (187)
92 COG0400 Predicted esterase [Ge 98.6 4.3E-07 9.3E-12 75.8 9.8 115 48-168 13-136 (207)
93 PF01738 DLH: Dienelactone hyd 98.5 5.5E-07 1.2E-11 75.0 9.7 108 51-164 12-130 (218)
94 KOG4667|consensus 98.5 6E-07 1.3E-11 74.6 9.3 97 50-152 30-128 (269)
95 PF10230 DUF2305: Uncharacteri 98.5 6E-07 1.3E-11 77.7 9.6 121 53-175 2-131 (266)
96 PF00326 Peptidase_S9: Prolyl 98.5 5.6E-07 1.2E-11 74.6 8.6 87 77-165 8-98 (213)
97 KOG1552|consensus 98.5 1.4E-06 3.1E-11 74.1 10.9 103 52-165 59-162 (258)
98 PF06028 DUF915: Alpha/beta hy 98.4 1.4E-06 3.1E-11 74.9 9.9 113 50-165 8-142 (255)
99 PF05057 DUF676: Putative seri 98.4 4.9E-07 1.1E-11 75.9 6.7 93 52-151 3-100 (217)
100 PF03403 PAF-AH_p_II: Platelet 98.4 9.7E-07 2.1E-11 80.2 8.8 110 51-166 98-262 (379)
101 PF10503 Esterase_phd: Esteras 98.4 1.2E-06 2.6E-11 73.8 7.8 104 52-159 15-125 (220)
102 PRK04940 hypothetical protein; 98.3 3.6E-06 7.9E-11 68.5 8.6 89 56-166 2-92 (180)
103 PRK10252 entF enterobactin syn 98.3 3.7E-06 8.1E-11 86.7 10.0 105 52-167 1067-1172(1296)
104 COG0412 Dienelactone hydrolase 98.2 2.2E-05 4.8E-10 66.8 11.9 109 51-165 25-145 (236)
105 COG1506 DAP2 Dipeptidyl aminop 98.2 7.5E-06 1.6E-10 78.9 10.0 97 54-151 395-495 (620)
106 COG2272 PnbA Carboxylesterase 98.2 8.8E-06 1.9E-10 75.0 9.5 115 50-167 91-218 (491)
107 COG3319 Thioesterase domains o 98.2 7.1E-06 1.5E-10 70.6 8.2 103 54-167 1-104 (257)
108 KOG4391|consensus 98.2 1.8E-06 3.9E-11 71.9 4.0 104 50-161 75-179 (300)
109 COG3571 Predicted hydrolase of 98.1 5.1E-05 1.1E-09 60.6 11.2 105 50-162 11-120 (213)
110 PRK10439 enterobactin/ferric e 98.1 0.0001 2.2E-09 67.7 14.0 113 50-165 206-322 (411)
111 TIGR01839 PHA_synth_II poly(R) 98.1 2.7E-05 5.9E-10 73.5 10.3 106 51-164 213-326 (560)
112 PF06500 DUF1100: Alpha/beta h 98.0 8.2E-06 1.8E-10 74.3 6.1 109 50-166 187-296 (411)
113 PF06057 VirJ: Bacterial virul 98.0 2.8E-05 6E-10 63.8 8.1 102 55-166 4-107 (192)
114 cd00312 Esterase_lipase Estera 98.0 4.1E-05 8.8E-10 71.5 9.8 110 50-163 92-210 (493)
115 PRK10115 protease 2; Provision 98.0 6.2E-05 1.4E-09 73.4 11.1 108 50-160 442-553 (686)
116 PF12146 Hydrolase_4: Putative 98.0 1.8E-05 3.9E-10 55.9 5.3 64 52-118 15-78 (79)
117 COG3545 Predicted esterase of 97.9 0.00013 2.8E-09 58.9 10.2 94 54-168 3-96 (181)
118 COG2945 Predicted hydrolase of 97.9 8.7E-05 1.9E-09 60.8 9.1 98 50-152 25-126 (210)
119 COG4814 Uncharacterized protei 97.9 0.0001 2.2E-09 62.8 9.7 106 55-163 47-173 (288)
120 COG2021 MET2 Homoserine acetyl 97.9 4.4E-05 9.5E-10 68.2 7.5 106 53-165 51-181 (368)
121 COG3509 LpqC Poly(3-hydroxybut 97.8 0.0001 2.2E-09 64.1 8.7 102 50-152 58-167 (312)
122 KOG2112|consensus 97.8 0.00019 4.1E-09 59.4 9.6 106 52-162 2-124 (206)
123 PF02129 Peptidase_S15: X-Pro 97.8 9.3E-05 2E-09 63.9 8.0 115 50-170 17-140 (272)
124 PF05677 DUF818: Chlamydia CHL 97.8 0.00014 3.1E-09 64.5 9.0 94 51-149 135-235 (365)
125 PF08538 DUF1749: Protein of u 97.8 0.00021 4.5E-09 62.8 9.7 109 52-166 32-148 (303)
126 PF05448 AXE1: Acetyl xylan es 97.8 0.00018 4E-09 64.0 9.5 110 50-166 80-209 (320)
127 KOG2984|consensus 97.8 4.2E-05 9.1E-10 63.2 4.9 112 47-166 36-149 (277)
128 COG1075 LipA Predicted acetylt 97.7 7.4E-05 1.6E-09 66.9 7.0 105 53-169 59-167 (336)
129 PF10340 DUF2424: Protein of u 97.7 0.0002 4.3E-09 64.6 9.5 107 52-169 121-238 (374)
130 PLN02733 phosphatidylcholine-s 97.7 0.0001 2.2E-09 68.3 7.6 90 70-165 109-200 (440)
131 KOG3724|consensus 97.7 0.00032 6.9E-09 67.9 11.0 112 49-163 85-217 (973)
132 COG3208 GrsT Predicted thioest 97.7 0.00013 2.9E-09 61.8 7.6 155 53-218 7-172 (244)
133 PF12048 DUF3530: Protein of u 97.7 0.001 2.3E-08 58.9 13.5 135 32-170 63-233 (310)
134 PF00756 Esterase: Putative es 97.7 5.7E-05 1.2E-09 63.9 4.8 48 116-165 101-149 (251)
135 PF12715 Abhydrolase_7: Abhydr 97.7 0.00015 3.3E-09 65.4 7.5 106 50-159 112-253 (390)
136 PTZ00472 serine carboxypeptida 97.6 0.00019 4.1E-09 67.0 8.2 100 50-150 74-192 (462)
137 KOG2624|consensus 97.6 7.9E-05 1.7E-09 68.0 5.5 119 43-166 65-199 (403)
138 COG4188 Predicted dienelactone 97.6 0.00046 9.9E-09 61.9 10.1 95 51-148 69-178 (365)
139 COG4099 Predicted peptidase [G 97.6 0.00022 4.7E-09 62.2 7.8 101 53-162 191-300 (387)
140 PF09752 DUF2048: Uncharacteri 97.6 0.00052 1.1E-08 61.2 10.0 117 50-171 89-217 (348)
141 COG3150 Predicted esterase [Ge 97.6 0.00074 1.6E-08 54.2 9.5 92 56-168 2-93 (191)
142 PLN02633 palmitoyl protein thi 97.5 0.00073 1.6E-08 59.4 9.5 101 54-163 26-128 (314)
143 PLN02606 palmitoyl-protein thi 97.5 0.0008 1.7E-08 59.1 9.6 102 53-163 26-129 (306)
144 PF00135 COesterase: Carboxyle 97.4 0.00037 8.1E-09 65.1 7.1 111 52-164 124-243 (535)
145 smart00824 PKS_TE Thioesterase 97.4 0.0012 2.7E-08 53.1 9.1 79 83-168 25-104 (212)
146 PF06259 Abhydrolase_8: Alpha/ 97.3 0.0034 7.4E-08 51.1 10.5 117 50-168 16-146 (177)
147 KOG3847|consensus 97.3 0.00094 2E-08 58.7 7.2 43 50-95 115-157 (399)
148 TIGR01849 PHB_depoly_PhaZ poly 97.2 0.0014 3E-08 60.1 8.4 101 53-163 102-205 (406)
149 KOG4840|consensus 97.2 0.0016 3.4E-08 54.7 7.8 110 50-166 33-144 (299)
150 KOG2565|consensus 97.2 0.0012 2.7E-08 59.1 7.4 92 53-152 152-252 (469)
151 COG4757 Predicted alpha/beta h 97.2 0.0012 2.5E-08 55.8 6.5 109 38-149 12-125 (281)
152 KOG3975|consensus 97.2 0.0035 7.6E-08 53.5 9.3 130 49-180 25-161 (301)
153 KOG2541|consensus 97.1 0.0047 1E-07 53.2 9.8 104 52-163 22-125 (296)
154 COG3243 PhaC Poly(3-hydroxyalk 97.1 0.0032 6.9E-08 57.4 9.0 105 52-163 106-214 (445)
155 PF11187 DUF2974: Protein of u 97.1 0.00081 1.8E-08 56.9 4.7 38 129-166 84-123 (224)
156 PF02089 Palm_thioest: Palmito 97.0 0.0019 4.2E-08 56.1 6.9 106 53-163 5-113 (279)
157 PF01764 Lipase_3: Lipase (cla 97.0 0.0015 3.2E-08 50.2 5.6 40 112-152 48-87 (140)
158 COG3458 Acetyl esterase (deace 97.0 0.0015 3.3E-08 56.3 6.0 110 51-167 81-211 (321)
159 PF02450 LCAT: Lecithin:choles 97.0 0.0027 5.9E-08 58.0 8.1 84 71-165 67-159 (389)
160 KOG1516|consensus 96.9 0.0039 8.5E-08 59.0 8.8 95 53-148 112-214 (545)
161 KOG3101|consensus 96.8 0.0011 2.4E-08 55.2 3.2 113 51-165 42-175 (283)
162 cd00519 Lipase_3 Lipase (class 96.7 0.0037 8E-08 52.5 5.6 38 113-151 113-150 (229)
163 PF08840 BAAT_C: BAAT / Acyl-C 96.5 0.0055 1.2E-07 51.2 5.5 54 114-170 6-60 (213)
164 PF03096 Ndr: Ndr family; Int 96.4 0.0057 1.2E-07 53.3 5.3 105 52-166 22-134 (283)
165 PF03583 LIP: Secretory lipase 96.4 0.014 3.1E-07 51.1 7.7 72 71-149 15-91 (290)
166 COG2382 Fes Enterochelin ester 96.3 0.0063 1.4E-07 53.2 5.1 111 50-165 95-211 (299)
167 PF02273 Acyl_transf_2: Acyl t 96.3 0.04 8.7E-07 47.1 9.7 100 44-150 21-122 (294)
168 KOG2931|consensus 96.3 0.023 4.9E-07 49.7 8.3 106 50-165 43-156 (326)
169 COG0627 Predicted esterase [Ge 96.2 0.023 5.1E-07 50.5 8.3 30 130-161 153-182 (316)
170 PF03959 FSH1: Serine hydrolas 96.2 0.014 3.1E-07 48.6 6.4 112 52-168 3-147 (212)
171 PF01083 Cutinase: Cutinase; 96.2 0.052 1.1E-06 44.2 9.5 104 55-162 7-118 (179)
172 PRK05371 x-prolyl-dipeptidyl a 96.1 0.031 6.8E-07 55.4 9.3 84 78-165 274-372 (767)
173 PLN02408 phospholipase A1 96.0 0.0087 1.9E-07 54.0 4.6 24 129-152 200-223 (365)
174 KOG1553|consensus 96.0 0.028 6.1E-07 50.3 7.5 99 52-164 242-342 (517)
175 KOG4372|consensus 95.8 0.0044 9.5E-08 56.2 1.8 91 53-150 80-171 (405)
176 PF05277 DUF726: Protein of un 95.7 0.022 4.7E-07 51.2 5.8 59 106-167 200-261 (345)
177 PF00450 Peptidase_S10: Serine 95.7 0.093 2E-06 47.5 10.1 95 51-150 38-157 (415)
178 KOG2281|consensus 95.7 0.064 1.4E-06 51.5 8.7 101 48-152 637-750 (867)
179 PLN02454 triacylglycerol lipas 95.6 0.021 4.6E-07 52.3 5.4 39 112-151 210-250 (414)
180 PLN02571 triacylglycerol lipas 95.4 0.021 4.5E-07 52.4 4.6 21 130-150 227-247 (413)
181 PLN02310 triacylglycerol lipas 95.4 0.015 3.3E-07 53.1 3.7 23 129-151 209-231 (405)
182 COG1770 PtrB Protease II [Amin 95.4 0.07 1.5E-06 51.3 8.1 139 49-191 444-597 (682)
183 PLN02802 triacylglycerol lipas 95.4 0.019 4.2E-07 53.7 4.3 24 129-152 330-353 (509)
184 KOG2100|consensus 95.4 0.066 1.4E-06 53.1 8.2 112 52-166 525-644 (755)
185 PLN03037 lipase class 3 family 95.3 0.018 3.9E-07 54.0 3.7 23 129-151 318-340 (525)
186 PF05577 Peptidase_S28: Serine 95.2 0.12 2.5E-06 47.7 9.0 117 49-170 25-150 (434)
187 KOG3967|consensus 95.2 0.11 2.4E-06 43.6 7.7 107 50-165 98-226 (297)
188 COG3946 VirJ Type IV secretory 95.2 0.062 1.4E-06 48.9 6.8 82 72-162 277-361 (456)
189 PF07082 DUF1350: Protein of u 95.1 0.28 6E-06 42.0 10.2 90 55-151 19-112 (250)
190 PLN00413 triacylglycerol lipas 95.1 0.029 6.4E-07 52.1 4.6 23 127-149 282-304 (479)
191 PLN02753 triacylglycerol lipas 95.0 0.032 7E-07 52.4 4.6 23 128-150 311-333 (531)
192 KOG4388|consensus 94.9 0.052 1.1E-06 51.5 5.5 91 53-148 396-488 (880)
193 PLN02324 triacylglycerol lipas 94.8 0.051 1.1E-06 49.8 5.2 21 130-150 216-236 (415)
194 PF11144 DUF2920: Protein of u 94.6 0.43 9.4E-06 43.7 10.7 44 52-95 34-77 (403)
195 PLN02162 triacylglycerol lipas 94.6 0.051 1.1E-06 50.5 4.7 24 127-150 276-299 (475)
196 KOG2385|consensus 94.5 0.03 6.5E-07 52.3 3.1 112 102-221 423-540 (633)
197 PLN02847 triacylglycerol lipas 94.3 0.081 1.8E-06 50.5 5.4 25 127-151 249-273 (633)
198 PLN02719 triacylglycerol lipas 94.2 0.06 1.3E-06 50.5 4.3 23 129-151 298-320 (518)
199 PLN02934 triacylglycerol lipas 94.1 0.068 1.5E-06 50.1 4.4 24 127-150 319-342 (515)
200 PF08237 PE-PPE: PE-PPE domain 93.9 0.39 8.5E-06 40.6 8.3 79 83-167 2-91 (225)
201 PF04301 DUF452: Protein of un 93.8 0.24 5.1E-06 41.6 6.8 77 52-163 10-87 (213)
202 PLN02761 lipase class 3 family 93.8 0.072 1.6E-06 50.1 4.1 23 129-151 294-316 (527)
203 COG2819 Predicted hydrolase of 93.7 0.13 2.8E-06 44.4 5.2 40 124-165 132-171 (264)
204 PF11339 DUF3141: Protein of u 93.7 1.4 3E-05 41.7 12.1 117 30-162 48-171 (581)
205 PF11288 DUF3089: Protein of u 93.2 0.22 4.8E-06 41.5 5.7 68 83-150 45-116 (207)
206 KOG2237|consensus 93.2 0.13 2.8E-06 49.4 4.6 101 50-152 467-572 (712)
207 PLN02517 phosphatidylcholine-s 92.9 0.23 5E-06 47.6 5.9 71 72-149 159-233 (642)
208 KOG2369|consensus 92.3 0.21 4.6E-06 46.3 4.7 39 113-152 167-205 (473)
209 KOG2029|consensus 91.4 0.49 1.1E-05 45.2 6.0 64 82-145 477-542 (697)
210 KOG2183|consensus 91.4 1.7 3.8E-05 40.0 9.3 105 44-152 71-190 (492)
211 KOG2551|consensus 91.1 0.67 1.5E-05 39.0 6.0 31 114-148 92-123 (230)
212 KOG4569|consensus 90.7 0.2 4.4E-06 44.9 2.9 26 127-152 169-194 (336)
213 KOG3253|consensus 90.0 0.98 2.1E-05 43.4 6.8 92 51-149 174-270 (784)
214 KOG3043|consensus 89.7 0.95 2.1E-05 38.3 5.8 94 53-149 39-140 (242)
215 PF06309 Torsin: Torsin; Inte 89.3 0.38 8.3E-06 37.0 3.0 32 50-81 49-80 (127)
216 COG2936 Predicted acyl esteras 89.2 1.5 3.3E-05 41.9 7.5 112 51-170 43-160 (563)
217 COG5153 CVT17 Putative lipase 88.8 0.7 1.5E-05 40.6 4.5 26 126-151 273-298 (425)
218 KOG4540|consensus 88.8 0.7 1.5E-05 40.6 4.5 26 126-151 273-298 (425)
219 COG0529 CysC Adenylylsulfate k 88.2 3.8 8.2E-05 33.6 8.1 45 48-93 17-61 (197)
220 COG2939 Carboxypeptidase C (ca 88.2 2.1 4.5E-05 40.3 7.4 96 52-152 100-221 (498)
221 PF09994 DUF2235: Uncharacteri 87.8 9.1 0.0002 33.2 11.0 40 113-152 76-115 (277)
222 KOG4389|consensus 86.7 1.6 3.6E-05 41.0 5.8 90 51-142 132-231 (601)
223 KOG1202|consensus 85.0 2.8 6E-05 43.7 6.8 108 41-165 2111-2218(2376)
224 PF06441 EHN: Epoxide hydrolas 84.2 0.63 1.4E-05 35.0 1.6 19 49-67 88-106 (112)
225 PLN03016 sinapoylglucose-malat 84.0 1.9 4E-05 40.1 5.0 99 50-150 63-186 (433)
226 TIGR03712 acc_sec_asp2 accesso 81.5 4.9 0.00011 37.8 6.7 92 52-152 288-380 (511)
227 PF04083 Abhydro_lipase: Parti 78.9 1.4 3.1E-05 29.5 1.7 22 49-71 39-60 (63)
228 PF05705 DUF829: Eukaryotic pr 76.7 18 0.0004 30.1 8.4 84 55-147 1-86 (240)
229 KOG1551|consensus 76.1 3.7 8.1E-05 35.8 3.9 87 76-165 135-229 (371)
230 PF01583 APS_kinase: Adenylyls 73.9 11 0.00023 30.1 5.8 71 53-126 1-75 (156)
231 KOG2182|consensus 73.6 36 0.00078 32.2 9.9 116 50-171 83-210 (514)
232 COG3727 Vsr DNA G:T-mismatch r 73.1 7.4 0.00016 30.2 4.4 15 51-65 55-71 (150)
233 COG1505 Serine proteases of th 72.1 5.4 0.00012 38.4 4.2 81 70-152 439-523 (648)
234 PLN02213 sinapoylglucose-malat 69.1 17 0.00037 32.2 6.6 65 84-150 2-72 (319)
235 PLN02209 serine carboxypeptida 67.2 13 0.00028 34.6 5.6 67 83-150 117-188 (437)
236 KOG1283|consensus 66.4 19 0.00041 32.4 6.1 98 51-151 29-144 (414)
237 PF07519 Tannase: Tannase and 65.9 12 0.00026 35.2 5.2 41 124-166 110-150 (474)
238 PF05576 Peptidase_S37: PS-10 64.5 8.4 0.00018 35.6 3.7 98 48-152 58-157 (448)
239 PF10081 Abhydrolase_9: Alpha/ 63.8 69 0.0015 28.2 9.0 88 77-164 55-145 (289)
240 COG3673 Uncharacterized conser 63.7 1.1E+02 0.0023 27.7 10.3 35 115-149 108-142 (423)
241 KOG2170|consensus 63.4 7.7 0.00017 34.5 3.2 29 50-78 106-134 (344)
242 cd07227 Pat_Fungal_NTE1 Fungal 62.4 12 0.00026 32.5 4.3 31 117-149 28-58 (269)
243 PF03283 PAE: Pectinacetyleste 62.3 13 0.00029 33.7 4.6 38 114-151 140-178 (361)
244 smart00827 PKS_AT Acyl transfe 62.1 11 0.00023 32.5 3.9 30 119-150 74-103 (298)
245 cd01714 ETF_beta The electron 58.8 67 0.0014 26.4 7.9 72 78-164 72-147 (202)
246 COG2830 Uncharacterized protei 58.6 25 0.00055 28.5 5.0 33 129-165 57-89 (214)
247 cd07224 Pat_like Patatin-like 57.9 17 0.00036 30.7 4.3 33 117-149 17-49 (233)
248 cd07210 Pat_hypo_W_succinogene 57.4 25 0.00055 29.3 5.3 32 116-149 17-48 (221)
249 PF14253 AbiH: Bacteriophage a 57.1 11 0.00023 32.1 3.0 18 127-144 233-250 (270)
250 PRK10279 hypothetical protein; 56.0 18 0.0004 31.8 4.3 31 117-149 23-53 (300)
251 cd07225 Pat_PNPLA6_PNPLA7 Pata 56.0 26 0.00056 31.0 5.3 32 116-149 32-63 (306)
252 PF06792 UPF0261: Uncharacteri 56.0 1E+02 0.0023 28.4 9.2 99 57-160 4-124 (403)
253 KOG2521|consensus 56.0 54 0.0012 29.7 7.3 91 50-145 35-125 (350)
254 TIGR00632 vsr DNA mismatch end 54.6 19 0.00042 27.2 3.7 14 51-64 54-69 (117)
255 cd07205 Pat_PNPLA6_PNPLA7_NTE1 54.2 25 0.00054 27.8 4.5 32 116-149 17-48 (175)
256 cd07207 Pat_ExoU_VipD_like Exo 51.5 36 0.00078 27.2 5.1 33 116-150 16-48 (194)
257 cd07198 Patatin Patatin-like p 51.4 29 0.00062 27.5 4.5 32 117-150 16-47 (172)
258 KOG1282|consensus 51.1 35 0.00076 32.0 5.5 101 50-151 70-190 (454)
259 cd07209 Pat_hypo_Ecoli_Z1214_l 49.0 30 0.00065 28.6 4.4 32 117-150 16-47 (215)
260 PRK02399 hypothetical protein; 48.0 1.9E+02 0.0041 26.8 9.6 99 57-160 6-126 (406)
261 TIGR03131 malonate_mdcH malona 47.8 25 0.00053 30.4 3.8 28 121-150 70-97 (295)
262 cd07228 Pat_NTE_like_bacteria 47.7 35 0.00076 27.1 4.5 32 117-150 18-49 (175)
263 cd07230 Pat_TGL4-5_like Triacy 47.3 29 0.00063 32.1 4.4 31 117-149 91-121 (421)
264 COG4822 CbiK Cobalamin biosynt 46.6 1.1E+02 0.0023 26.1 7.0 77 50-147 135-214 (265)
265 COG1752 RssA Predicted esteras 46.6 29 0.00062 30.4 4.1 33 117-151 29-61 (306)
266 PLN02752 [acyl-carrier protein 44.8 27 0.00059 31.1 3.7 19 132-150 127-145 (343)
267 PRK12467 peptide synthase; Pro 42.9 1E+02 0.0023 36.8 8.7 109 51-170 3690-3799(3956)
268 cd07204 Pat_PNPLA_like Patatin 42.0 39 0.00085 28.7 4.1 34 117-150 17-52 (243)
269 PF00698 Acyl_transf_1: Acyl t 41.9 24 0.00052 31.0 2.9 30 119-150 76-105 (318)
270 cd07208 Pat_hypo_Ecoli_yjju_li 40.5 68 0.0015 27.3 5.4 32 116-149 15-47 (266)
271 KOG0436|consensus 40.0 1.1E+02 0.0024 28.7 6.7 86 51-137 326-425 (578)
272 cd07229 Pat_TGL3_like Triacylg 39.8 44 0.00096 30.7 4.3 31 117-149 101-131 (391)
273 TIGR00128 fabD malonyl CoA-acy 39.3 43 0.00094 28.6 4.0 26 123-150 78-104 (290)
274 cd07222 Pat_PNPLA4 Patatin-lik 38.8 44 0.00095 28.4 3.9 32 117-148 17-50 (246)
275 cd07206 Pat_TGL3-4-5_SDP1 Tria 38.6 51 0.0011 29.1 4.3 31 117-149 87-117 (298)
276 PRK00889 adenylylsulfate kinas 38.6 46 0.001 26.2 3.8 40 52-92 2-41 (175)
277 cd07212 Pat_PNPLA9 Patatin-lik 37.8 61 0.0013 28.6 4.8 19 132-150 35-53 (312)
278 cd07232 Pat_PLPL Patain-like p 37.2 53 0.0011 30.3 4.4 31 117-149 85-115 (407)
279 PF10664 NdhM: Cyanobacterial 37.2 32 0.00069 25.3 2.3 34 105-139 66-102 (108)
280 cd07231 Pat_SDP1-like Sugar-De 36.9 58 0.0013 29.2 4.4 31 117-149 86-116 (323)
281 PF07394 DUF1501: Protein of u 33.5 2.2E+02 0.0047 25.7 7.8 55 82-137 244-299 (392)
282 COG1073 Hydrolases of the alph 33.4 64 0.0014 26.7 4.1 38 51-91 47-84 (299)
283 PF12000 Glyco_trans_4_3: Gkyc 33.3 1.7E+02 0.0036 23.6 6.2 58 83-142 20-79 (171)
284 COG3340 PepE Peptidase E [Amin 32.8 1.1E+02 0.0024 25.8 5.2 44 50-94 29-73 (224)
285 cd01819 Patatin_and_cPLA2 Pata 32.8 74 0.0016 24.8 4.1 31 117-147 16-46 (155)
286 COG3887 Predicted signaling pr 32.2 2.1E+02 0.0045 28.0 7.5 36 111-149 323-365 (655)
287 cd07218 Pat_iPLA2 Calcium-inde 31.8 72 0.0016 27.2 4.1 34 117-150 18-51 (245)
288 COG3640 CooC CO dehydrogenase 31.7 60 0.0013 27.9 3.5 38 56-93 2-39 (255)
289 TIGR03709 PPK2_rel_1 polyphosp 30.5 58 0.0013 28.3 3.3 41 51-92 53-93 (264)
290 smart00037 CNX Connexin homolo 30.5 28 0.00061 20.3 0.9 13 206-221 9-21 (34)
291 PRK07877 hypothetical protein; 29.3 54 0.0012 32.7 3.3 38 127-168 106-143 (722)
292 KOG1578|consensus 29.1 33 0.00071 29.9 1.5 47 114-166 144-193 (276)
293 PF01935 DUF87: Domain of unkn 27.7 66 0.0014 26.4 3.2 37 57-93 26-62 (229)
294 TIGR03707 PPK2_P_aer polyphosp 27.6 69 0.0015 27.2 3.2 42 50-92 27-68 (230)
295 PF03852 Vsr: DNA mismatch end 27.2 37 0.0008 23.6 1.2 14 51-64 54-69 (75)
296 PRK03846 adenylylsulfate kinas 27.1 81 0.0017 25.5 3.5 40 50-90 20-59 (198)
297 smart00400 ZnF_CHCC zinc finge 26.8 59 0.0013 20.6 2.1 18 11-28 4-21 (55)
298 KOG3770|consensus 26.6 81 0.0018 30.5 3.8 28 113-140 343-370 (577)
299 COG0331 FabD (acyl-carrier-pro 26.6 73 0.0016 28.3 3.4 22 127-148 83-104 (310)
300 PF02492 cobW: CobW/HypB/UreG, 26.5 47 0.001 26.5 2.0 21 55-75 1-21 (178)
301 PRK05282 (alpha)-aspartyl dipe 26.4 3E+02 0.0065 23.3 6.9 88 52-146 30-129 (233)
302 COG4947 Uncharacterized protei 26.1 2.9E+02 0.0063 22.8 6.3 32 129-162 101-132 (227)
303 PF08255 Leader_Trp: Trp-opero 25.7 47 0.001 15.4 1.0 11 54-64 2-12 (14)
304 cd07213 Pat17_PNPLA8_PNPLA9_li 25.1 1.1E+02 0.0024 26.5 4.2 19 132-150 37-55 (288)
305 PF11181 YflT: Heat induced st 25.0 1.2E+02 0.0026 21.9 3.8 26 113-138 11-36 (103)
306 COG4425 Predicted membrane pro 23.6 2.9E+02 0.0064 26.2 6.6 60 77-142 343-410 (588)
307 TIGR00455 apsK adenylylsulfate 23.6 1E+02 0.0022 24.4 3.4 40 51-91 15-54 (184)
308 PF01580 FtsK_SpoIIIE: FtsK/Sp 23.4 3.2E+02 0.0069 21.9 6.5 39 56-94 40-81 (205)
309 TIGR02356 adenyl_thiF thiazole 23.4 72 0.0016 26.1 2.6 35 127-166 20-55 (202)
310 cd01483 E1_enzyme_family Super 23.3 1E+02 0.0023 23.3 3.3 36 130-170 1-37 (143)
311 PF03205 MobB: Molybdopterin g 23.1 67 0.0015 24.7 2.2 38 55-93 1-39 (140)
312 TIGR02816 pfaB_fam PfaB family 22.8 1.2E+02 0.0026 29.2 4.2 26 123-150 261-286 (538)
313 COG0541 Ffh Signal recognition 22.5 2E+02 0.0044 26.9 5.4 110 50-160 96-245 (451)
314 cd01492 Aos1_SUMO Ubiquitin ac 22.5 87 0.0019 25.6 2.9 37 128-168 21-57 (197)
315 PRK08644 thiamine biosynthesis 21.8 1.2E+02 0.0026 25.1 3.6 34 127-165 27-61 (212)
316 PF08250 Sperm_act_pep: Sperm- 21.7 22 0.00047 15.0 -0.4 6 135-140 1-6 (10)
317 PF00899 ThiF: ThiF family; I 21.2 99 0.0021 23.2 2.8 35 129-168 3-38 (135)
318 PF03575 Peptidase_S51: Peptid 20.7 1.1E+02 0.0025 23.6 3.1 13 131-143 70-82 (154)
319 cd01715 ETF_alpha The electron 20.7 3.3E+02 0.0071 21.3 5.8 73 77-164 46-119 (168)
320 PF11713 Peptidase_C80: Peptid 20.7 1E+02 0.0022 24.4 2.8 37 105-141 77-116 (157)
321 cd07220 Pat_PNPLA2 Patatin-lik 20.5 1.5E+02 0.0032 25.3 4.0 19 131-149 38-56 (249)
322 PF07643 DUF1598: Protein of u 20.1 2.3E+02 0.005 20.1 4.1 48 115-167 30-79 (84)
No 1
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=100.00 E-value=1.5e-58 Score=409.77 Aligned_cols=220 Identities=43% Similarity=0.697 Sum_probs=178.1
Q ss_pred CCCCCCCceEEEEEcCCCCCCCceeecCCccccccCCCCCCCcEEEEEeCCCCCC-CCCchHHHHHHHHhc--CCeEEEE
Q psy4317 12 CPINEPDDITFLLFTRANSHTPDILRAGHEMDLKMSHMNRQMTTVFYIHGFTEQA-NGESGTTVKDAYLRR--GDFNIIL 88 (235)
Q Consensus 12 ~~~~~~~~v~f~lyt~~n~~~~~~i~~~~~~~i~~~~~~~~~p~vi~iHG~~~s~-~~~~~~~l~~~ll~~--~~~nVi~ 88 (235)
|..+.+.+++|+|||++|++.++++..++.+++.++.|++++|++|+||||.++. +..|...+.++++++ +++|||+
T Consensus 30 p~~~~~~~v~f~LyT~~n~~~~~~l~~~~~~~l~~s~fn~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~ 109 (331)
T PF00151_consen 30 PQSPNEIDVKFYLYTRSNPDNPQLLDNGDPESLRNSNFNPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIV 109 (331)
T ss_dssp ---HHHHT-EEEEEETTEECCEEEEBTSSTHHHHTSS--TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEE
T ss_pred CCCCCCCCeEEEEECCCCCCceeEeccCCcccccccccCCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEE
Confidence 4555667899999999999999999878888999999999999999999999999 677999999999888 7999999
Q ss_pred EeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 89 VDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 89 vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
|||+.++. ..|..++.+++.|++.|+++|..|. +.+++.++||||||||||||||++|+++....+|+|||+||||+|
T Consensus 110 VDWs~~a~-~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 110 VDWSRGAS-NNYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp EE-HHHHS-S-HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred Ecchhhcc-ccccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 99999877 5799999999999999999999998 788999999999999999999999999977228999999999999
Q ss_pred CCCCCCCCCCCCccCCCeeEEEeeCC-----CCCCCcccccceeeecCCCCCCCCCCCccc--------cccccccccc
Q psy4317 168 LYGFTGGEGHLSKEDADFVDVIHTDG-----GILGFPVPIGHADFFPNGGFPVQPGCHIRQ--------LLRKNSIEHF 233 (235)
Q Consensus 168 ~f~~~~~~~~l~~~dA~~v~viht~~-----~~~G~~~~~g~~d~y~ngg~~~qpgC~~~~--------~~~~~~~~~~ 233 (235)
+|+..+...||+++||+|||||||++ +.+|+.+|+||+|||||||. .||||.... |+|.+..+.|
T Consensus 189 ~F~~~~~~~rL~~~DA~fVdvIHT~~~~~~~~~~G~~~~~Gh~DFYpNgG~-~QPGC~~~~~~~~~~~~CsH~ra~~~f 266 (331)
T PF00151_consen 189 LFENNPPSERLDKSDAKFVDVIHTNAGTLPGGGLGTSEPIGHVDFYPNGGR-RQPGCGNDSLELTRFISCSHMRAVEYF 266 (331)
T ss_dssp TTTTS-TTTS--GGGSSEEEEE-SSES-HHH-SSBESS--SSEEEEETTTT-S-TTSSS-CHTTCSHHHHHHHHHHHHH
T ss_pred cccCCChhHhhhccCCceEEEEEcCCccccCCccccccccccceeecCCCc-cCCCCccccccceecchhhhHHHHHHH
Confidence 99988888999999999999999999 89999999999999999999 699999776 8999888765
No 2
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=100.00 E-value=2.8e-54 Score=392.54 Aligned_cols=214 Identities=34% Similarity=0.601 Sum_probs=189.1
Q ss_pred CCCceEEEEEcCCCCCC-CceeecCCccccccCCCCCCCcEEEEEeCCCCCCC-CCchHHHHHHHHhc-CCeEEEEEeCC
Q psy4317 16 EPDDITFLLFTRANSHT-PDILRAGHEMDLKMSHMNRQMTTVFYIHGFTEQAN-GESGTTVKDAYLRR-GDFNIILVDWS 92 (235)
Q Consensus 16 ~~~~v~f~lyt~~n~~~-~~~i~~~~~~~i~~~~~~~~~p~vi~iHG~~~s~~-~~~~~~l~~~ll~~-~~~nVi~vD~~ 92 (235)
.+++++|+||||+|++. .++|+..++++|.++.|++++|++|+||||.++.. ..|...++++++.+ .++|||++||+
T Consensus 3 ~~i~~~F~L~Tr~n~~~~~~~l~~~~~~si~~s~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~ 82 (442)
T TIGR03230 3 TDIESKFSLRTPEEPDDDTCYIVPGQPDSIADCNFNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWL 82 (442)
T ss_pred cccccEEEEEecCCCCCCceEEecCChhhhhhcCcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECC
Confidence 46889999999999987 56898888889999999999999999999998653 34777777777644 37999999999
Q ss_pred CCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCCC
Q psy4317 93 GLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYGF 171 (235)
Q Consensus 93 ~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~~ 171 (235)
+++. ..|+.+..+++.+|++++++++.|. +.+++++++||||||||||||+++|+..+. +|+|||+||||+|+|..
T Consensus 83 g~g~-s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAgP~F~~ 159 (442)
T TIGR03230 83 SRAQ-QHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAGPTFEY 159 (442)
T ss_pred CcCC-CCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCCCcccc
Confidence 9887 5687777888999999999999987 456788999999999999999999998765 89999999999999998
Q ss_pred CCCCCCCCccCCCeeEEEeeCCC-----CCCCcccccceeeecCCCCCCCCCCCc------------------ccccccc
Q psy4317 172 TGGEGHLSKEDADFVDVIHTDGG-----ILGFPVPIGHADFFPNGGFPVQPGCHI------------------RQLLRKN 228 (235)
Q Consensus 172 ~~~~~~l~~~dA~~v~viht~~~-----~~G~~~~~g~~d~y~ngg~~~qpgC~~------------------~~~~~~~ 228 (235)
.++..||+++||+|||||||+++ .+|+.+|+||+|||||||. .||||.. ..|+|.+
T Consensus 160 ~~~~~rLd~~DA~fVdVIHTd~~~~~~~~lG~~~piGh~DFYPNGG~-~QPGC~~~~~~~~~~~~~~~~~~~~~~CsH~R 238 (442)
T TIGR03230 160 ADAPSTLSPDDADFVDVLHTNTRGSPDRSIGIQRPVGHIDIYPNGGT-FQPGCDIQETLLVIAEKGLGNMDQLVKCSHER 238 (442)
T ss_pred cccccccCCCCCCeEEEEEecCCccccccccccccccceEeccCCCC-CCCCCCccccccccccccccccCcCccchhHH
Confidence 88889999999999999999974 6999999999999999998 8999974 2588888
Q ss_pred ccccc
Q psy4317 229 SIEHF 233 (235)
Q Consensus 229 ~~~~~ 233 (235)
.++.|
T Consensus 239 a~~~f 243 (442)
T TIGR03230 239 SIHLF 243 (442)
T ss_pred HHHHH
Confidence 87766
No 3
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=1.4e-53 Score=370.23 Aligned_cols=211 Identities=48% Similarity=0.826 Sum_probs=192.4
Q ss_pred ceEEEEEcCCCCCCCceeecCCccccccCCCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC
Q psy4317 19 DITFLLFTRANSHTPDILRAGHEMDLKMSHMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP 98 (235)
Q Consensus 19 ~v~f~lyt~~n~~~~~~i~~~~~~~i~~~~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~ 98 (235)
+++|+||||+|++.++.+..+|..++..+.|++++|++|+||||.++.+..|...++++++.++++|||++||++.+. .
T Consensus 2 ~~~f~l~t~~~~~~~~~~~~~~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~-~ 80 (275)
T cd00707 2 DVRFLLYTRENPNCPQLLFADDPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGAN-P 80 (275)
T ss_pred CCEEEEecCCCCCCceEecCCChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccc-c
Confidence 689999999999999999988777899999999999999999999998656888888888877789999999998855 6
Q ss_pred chhhhhcchHHHHHHHHHHHHHHHh-cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCCCCCCCCC
Q psy4317 99 WYTNAATNTHIVGHFIAAFIRFLQS-KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYGFTGGEGH 177 (235)
Q Consensus 99 ~y~~~~~~~~~v~~~l~~~l~~l~~-~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~~~~~~~~ 177 (235)
.|+.+..+++.++++++++++.|.+ .+++.++++|||||||||||+++|+.+++ +|++|++||||+|.|.......|
T Consensus 81 ~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~p~f~~~~~~~r 158 (275)
T cd00707 81 NYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAGPLFSGADPEDR 158 (275)
T ss_pred ChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCcccccCCCcccc
Confidence 7888888899999999999999874 46778999999999999999999999876 89999999999999998778889
Q ss_pred CCccCCCeeEEEeeCCCCCCCcccccceeeecCCCCCCCCCCCc-------cccccccccccc
Q psy4317 178 LSKEDADFVDVIHTDGGILGFPVPIGHADFFPNGGFPVQPGCHI-------RQLLRKNSIEHF 233 (235)
Q Consensus 178 l~~~dA~~v~viht~~~~~G~~~~~g~~d~y~ngg~~~qpgC~~-------~~~~~~~~~~~~ 233 (235)
|+++||+|||||||+++.+|+.+|+||+|||||||. .||||.. ..|+|.+..+.|
T Consensus 159 l~~~dA~~V~vihT~~~~~G~~~~~gh~dfypngg~-~QpgC~~~~~~~~~~~CsH~ra~~~~ 220 (275)
T cd00707 159 LDPSDAQFVDVIHTDGGLLGFSQPIGHADFYPNGGR-DQPGCPKDILSSDFVACSHQRAVHYF 220 (275)
T ss_pred cCCCCCCeEEEEEeCCCCCCccccccceEeccCCCC-CCCCCCCccccccccccchHHHHHHH
Confidence 999999999999999999999999999999999999 6999986 579999988776
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.66 E-value=1.2e-15 Score=132.59 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=83.2
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchh------hhhcchHHHHHHHHHHHHHHHhcC
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYT------NAATNTHIVGHFIAAFIRFLQSKG 125 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~------~~~~~~~~v~~~l~~~l~~l~~~~ 125 (235)
+.|+|||+|||.++.. .|. .+...+ .. .++|+++|++|.+.+.... ....+++..++++.++++.+
T Consensus 28 ~~~~vlllHG~~~~~~-~w~-~~~~~L-~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l---- 99 (294)
T PLN02824 28 SGPALVLVHGFGGNAD-HWR-KNTPVL-AK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV---- 99 (294)
T ss_pred CCCeEEEECCCCCChh-HHH-HHHHHH-Hh-CCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh----
Confidence 4589999999999887 365 444544 44 4899999999977643211 12357788888999999876
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
..++++||||||||.||..++...|+ +|.++++++|+.+.
T Consensus 100 -~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~ 139 (294)
T PLN02824 100 -VGDPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRG 139 (294)
T ss_pred -cCCCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCccc
Confidence 45899999999999999999999887 89999999986543
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=2.9e-15 Score=130.85 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=80.3
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhh-hhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTN-AATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~-~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
++|+|||||||.++.. .|. .+.+. |.+.+|+|+++|++|++.+..-.. ...+.+..++++.++++.+ +.++
T Consensus 45 ~~~~lvliHG~~~~~~-~w~-~~~~~-L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l-----~~~~ 116 (302)
T PRK00870 45 DGPPVLLLHGEPSWSY-LYR-KMIPI-LAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL-----DLTD 116 (302)
T ss_pred CCCEEEEECCCCCchh-hHH-HHHHH-HHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-----CCCC
Confidence 4689999999987765 354 55554 443379999999999776432111 1235677778888888765 5678
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
++||||||||.+|..++...++ +|.++++++|..+
T Consensus 117 v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 151 (302)
T PRK00870 117 VTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTGLP 151 (302)
T ss_pred EEEEEEChHHHHHHHHHHhChh--heeEEEEeCCCCC
Confidence 9999999999999999998876 8999999987544
No 6
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.60 E-value=8.3e-15 Score=123.01 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=78.4
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
++|+|||+|||.++.. .|. .+.+. + + +|+|+++|++|.+.+... ...++...++++.++++.+ ..+++
T Consensus 1 ~~p~vvllHG~~~~~~-~w~-~~~~~-l-~-~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~l~~~l~~~-----~~~~~ 68 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQ-DWQ-PVGEA-L-P-DYPRLYIDLPGHGGSAAI--SVDGFADVSRLLSQTLQSY-----NILPY 68 (242)
T ss_pred CCCEEEEECCCCCChH-HHH-HHHHH-c-C-CCCEEEecCCCCCCCCCc--cccCHHHHHHHHHHHHHHc-----CCCCe
Confidence 3688999999999886 465 44454 4 3 699999999997764322 1236777778888888764 56899
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++|||||||.+|..++...++. +|++|+++++..
T Consensus 69 ~lvG~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~ 102 (242)
T PRK11126 69 WLVGYSLGGRIAMYYACQGLAG-GLCGLIVEGGNP 102 (242)
T ss_pred EEEEECHHHHHHHHHHHhCCcc-cccEEEEeCCCC
Confidence 9999999999999999987653 599999887653
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.59 E-value=5.3e-15 Score=127.47 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=82.1
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
+++++|||+|||.++.. .|. .+.+. +.+ +++|+++|++|.+.+.. +....+.+.+++++.++++.+ +.++
T Consensus 23 ~~~~plvllHG~~~~~~-~w~-~~~~~-L~~-~~~vi~~Dl~G~G~S~~-~~~~~~~~~~~~~~~~~i~~l-----~~~~ 92 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLE-LVF-PFIEA-LDP-DLEVIAFDVPGVGGSST-PRHPYRFPGLAKLAARMLDYL-----DYGQ 92 (276)
T ss_pred CCCCcEEEEeCCCcchH-HHH-HHHHH-hcc-CceEEEECCCCCCCCCC-CCCcCcHHHHHHHHHHHHHHh-----CcCc
Confidence 35578999999998886 354 44443 554 69999999999876432 222345677788888888876 5678
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
++||||||||.||..+|.+.++ +|++|++++|+..
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~ 127 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPE--RCKKLILAATAAG 127 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHH--HhhheEEeccCCc
Confidence 9999999999999999999887 8999999998753
No 8
>PLN02965 Probable pheophorbidase
Probab=99.59 E-value=8.4e-15 Score=124.91 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=77.9
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCC-ccEEE
Q psy4317 55 TVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPL-HKMHV 133 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~-~~i~l 133 (235)
.|||+|||..+.. .|. .+...|... +|+|+++|++|.+.+..-.....++...++++.++++.| +. +++++
T Consensus 5 ~vvllHG~~~~~~-~w~-~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l-----~~~~~~~l 76 (255)
T PLN02965 5 HFVFVHGASHGAW-CWY-KLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL-----PPDHKVIL 76 (255)
T ss_pred EEEEECCCCCCcC-cHH-HHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc-----CCCCCEEE
Confidence 4999999998766 355 455554344 799999999998764321112345677788888888875 34 58999
Q ss_pred EEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 134 IGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 134 IGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
|||||||.|+..++..+++ +|.++++++++.
T Consensus 77 vGhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~ 107 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTD--KISMAIYVAAAM 107 (255)
T ss_pred EecCcchHHHHHHHHhCch--heeEEEEEcccc
Confidence 9999999999999998877 899999998864
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.58 E-value=1.5e-14 Score=127.85 Aligned_cols=149 Identities=13% Similarity=0.113 Sum_probs=96.1
Q ss_pred CCCCCceEEEEEcCCCCC--------CCceeecCCccccccCCC-----CCCCcEEEEEeCCCCCCCCCchHHHHHHHHh
Q psy4317 14 INEPDDITFLLFTRANSH--------TPDILRAGHEMDLKMSHM-----NRQMTTVFYIHGFTEQANGESGTTVKDAYLR 80 (235)
Q Consensus 14 ~~~~~~v~f~lyt~~n~~--------~~~~i~~~~~~~i~~~~~-----~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~ 80 (235)
...+.+|.||.-+++.+. +...+...|-..|....+ .+.+++|||+|||..+... .+..+...+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~-~~~~~~~~L~~ 85 (330)
T PLN02298 7 HATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISW-TFQSTAIFLAQ 85 (330)
T ss_pred CCCCCCccccccCCHHHHhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcce-ehhHHHHHHHh
Confidence 345667788876655331 011222223223332222 1346789999999866431 13334443444
Q ss_pred cCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhc-CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcc
Q psy4317 81 RGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSK-GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRI 159 (235)
Q Consensus 81 ~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~-~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI 159 (235)
.||+|+++|++|.+.+........+++..++++..+++.+... ..+..+++|+||||||.+|..++...++ +|.++
T Consensus 86 -~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~l 162 (330)
T PLN02298 86 -MGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGA 162 (330)
T ss_pred -CCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeE
Confidence 4799999999997764322122345677788899999988632 2334579999999999999998888776 79999
Q ss_pred cccCCCC
Q psy4317 160 TGLDPAF 166 (235)
Q Consensus 160 ~~ldPa~ 166 (235)
+++.|..
T Consensus 163 vl~~~~~ 169 (330)
T PLN02298 163 VLVAPMC 169 (330)
T ss_pred EEecccc
Confidence 9998764
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.57 E-value=2e-14 Score=128.35 Aligned_cols=112 Identities=11% Similarity=0.099 Sum_probs=81.7
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHh-cCCCCc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQS-KGFPLH 129 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~-~~~~~~ 129 (235)
..+++|||+|||.++.. .|+..+...+.+. +|+|+++|++|.+.+..-.....+....++++.++++.+.. ...+..
T Consensus 85 ~~~~~iv~lHG~~~~~~-~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~ 162 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCT-FFFEGIARKIASS-GYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGL 162 (349)
T ss_pred CCCeEEEEECCCCCccc-hHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCC
Confidence 35789999999988765 2455666555444 79999999999776431101123556677778788877652 223445
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+++|+||||||.||..++...++ ++.++++++|+.
T Consensus 163 ~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~ 197 (349)
T PLN02385 163 PSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMC 197 (349)
T ss_pred CEEEEEeccchHHHHHHHHhCcc--hhhheeEecccc
Confidence 89999999999999999988876 799999998864
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.56 E-value=2.8e-14 Score=119.17 Aligned_cols=105 Identities=14% Similarity=0.171 Sum_probs=78.9
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
.++|+|||+|||.++.. .|. .+.. .+.+ +|+|+++|++|.+.+..-.....+....++++.++++.+ +.++
T Consensus 11 ~~~~~iv~lhG~~~~~~-~~~-~~~~-~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-----~~~~ 81 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS-YWA-PQLD-VLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-----NIER 81 (257)
T ss_pred CCCCEEEEEcCCCcchh-HHH-HHHH-HHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-----CCCc
Confidence 45789999999999876 354 3444 3454 699999999997654321122345677777888888765 4678
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++++||||||.+|..++...++ +|.+++++++..
T Consensus 82 ~~l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~ 115 (257)
T TIGR03611 82 FHFVGHALGGLIGLQLALRYPE--RLLSLVLINAWS 115 (257)
T ss_pred EEEEEechhHHHHHHHHHHChH--HhHHheeecCCC
Confidence 9999999999999999888776 799999888643
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.55 E-value=2.9e-14 Score=120.51 Aligned_cols=102 Identities=18% Similarity=0.252 Sum_probs=79.1
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
.++|+|||+||+.++... | ..+... +.+ +|+|+++|++|.+.+. .. ...+....++++.++++.+ ..++
T Consensus 14 ~~~~~iv~lhG~~~~~~~-~-~~~~~~-l~~-~~~vi~~D~~G~G~s~-~~-~~~~~~~~~~d~~~~l~~l-----~~~~ 82 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDN-L-GVLARD-LVN-DHDIIQVDMRNHGLSP-RD-PVMNYPAMAQDLLDTLDAL-----QIEK 82 (255)
T ss_pred CCCCCEEEECCCCCchhH-H-HHHHHH-Hhh-CCeEEEECCCCCCCCC-CC-CCCCHHHHHHHHHHHHHHc-----CCCc
Confidence 467899999999988762 4 445554 444 6999999999976533 22 2245677778888888775 5578
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
++||||||||.+|..++...++ +|.++++++++
T Consensus 83 ~~lvGhS~Gg~va~~~a~~~~~--~v~~lvli~~~ 115 (255)
T PRK10673 83 ATFIGHSMGGKAVMALTALAPD--RIDKLVAIDIA 115 (255)
T ss_pred eEEEEECHHHHHHHHHHHhCHh--hcceEEEEecC
Confidence 9999999999999999988776 89999999864
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.55 E-value=4.5e-14 Score=120.16 Aligned_cols=104 Identities=18% Similarity=0.129 Sum_probs=77.5
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
+.|+|||+|||.++.. .|. .+... +.+ +|+|+++|++|.+.+..-.....+++..++++.++++.+ ..+++
T Consensus 27 ~~~~vv~~hG~~~~~~-~~~-~~~~~-l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~-----~~~~~ 97 (278)
T TIGR03056 27 AGPLLLLLHGTGASTH-SWR-DLMPP-LAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE-----GLSPD 97 (278)
T ss_pred CCCeEEEEcCCCCCHH-HHH-HHHHH-Hhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc-----CCCCc
Confidence 4689999999988766 354 44444 454 599999999997653211111345677778888877764 45789
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+|+||||||.++..++...++ ++.+++.++++.
T Consensus 98 ~lvG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~ 130 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALDGPV--TPRMVVGINAAL 130 (278)
T ss_pred eEEEECccHHHHHHHHHhCCc--ccceEEEEcCcc
Confidence 999999999999999988876 789999888753
No 14
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.55 E-value=4.4e-14 Score=122.38 Aligned_cols=108 Identities=14% Similarity=0.125 Sum_probs=78.4
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
+.++|+|||+||+..+.. .| ..+... |...+|+|+++|+++.+.+..-.....+++..++++.++++.+ . ..+
T Consensus 15 ~~~~p~vvliHG~~~~~~-~w-~~~~~~-L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l---~-~~~ 87 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSW-CW-YKIRCL-MENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL---P-ENE 87 (273)
T ss_pred cCCCCeEEEECCCCCCcC-cH-HHHHHH-HHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc---C-CCC
Confidence 466889999999988876 35 455554 4434799999999997653211111245666666677676654 1 247
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+++||||||||.++..++..+++ +|.+++.+++..
T Consensus 88 ~v~lvGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~~ 122 (273)
T PLN02211 88 KVILVGHSAGGLSVTQAIHRFPK--KICLAVYVAATM 122 (273)
T ss_pred CEEEEEECchHHHHHHHHHhChh--heeEEEEecccc
Confidence 89999999999999999988776 899999997643
No 15
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.54 E-value=4e-14 Score=114.99 Aligned_cols=101 Identities=20% Similarity=0.305 Sum_probs=78.1
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhh-hhcchHHHHHHHHHHHHHHHhcCCCCccEEEE
Q psy4317 56 VFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTN-AATNTHIVGHFIAAFIRFLQSKGFPLHKMHVI 134 (235)
Q Consensus 56 vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~-~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lI 134 (235)
|||+||+.++.. .| ..+.+.+ ++ +++|+++|++|.+.+..... ...+.+..++++.++++.+ ..+++++|
T Consensus 1 vv~~hG~~~~~~-~~-~~~~~~l-~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SW-DPLAEAL-AR-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL-----GIKKVILV 71 (228)
T ss_dssp EEEE-STTTTGG-GG-HHHHHHH-HT-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT-----TTSSEEEE
T ss_pred eEEECCCCCCHH-HH-HHHHHHH-hC-CCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc-----cccccccc
Confidence 799999999985 34 4566655 54 89999999999766432221 2355677778888888775 44799999
Q ss_pred EechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 135 GFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 135 GHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
|||+||.++..++...++ +|.++++++|...
T Consensus 72 G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPD--RVKGLVLLSPPPP 102 (228)
T ss_dssp EETHHHHHHHHHHHHSGG--GEEEEEEESESSS
T ss_pred cccccccccccccccccc--ccccceeeccccc
Confidence 999999999999998887 8999999998774
No 16
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.54 E-value=3.8e-14 Score=123.16 Aligned_cols=102 Identities=11% Similarity=0.104 Sum_probs=80.0
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
++|+|||+||+.++.. .|. .+...+.+ .++|+++|++|.+.+. .+....+....++++.++++.+ ..+++
T Consensus 26 ~g~~vvllHG~~~~~~-~w~-~~~~~L~~--~~~via~D~~G~G~S~-~~~~~~~~~~~a~dl~~ll~~l-----~~~~~ 95 (295)
T PRK03592 26 EGDPIVFLHGNPTSSY-LWR-NIIPHLAG--LGRCLAPDLIGMGASD-KPDIDYTFADHARYLDAWFDAL-----GLDDV 95 (295)
T ss_pred CCCEEEEECCCCCCHH-HHH-HHHHHHhh--CCEEEEEcCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-----CCCCe
Confidence 4689999999998775 354 55555543 3699999999977643 2222346777788888888876 46899
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
++|||||||.||..++...|+ +|++|++++|.
T Consensus 96 ~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~ 127 (295)
T PRK03592 96 VLVGHDWGSALGFDWAARHPD--RVRGIAFMEAI 127 (295)
T ss_pred EEEEECHHHHHHHHHHHhChh--heeEEEEECCC
Confidence 999999999999999999887 89999999973
No 17
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.53 E-value=4e-14 Score=127.30 Aligned_cols=104 Identities=15% Similarity=0.181 Sum_probs=78.5
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEE
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMH 132 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~ 132 (235)
.|+|||+|||.++.. .|...+ .. +.. +|+|+++|++|.+.+..-.....+++..++++.++++.+ ..++++
T Consensus 88 gp~lvllHG~~~~~~-~w~~~~-~~-L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-----~~~~~~ 158 (360)
T PLN02679 88 GPPVLLVHGFGASIP-HWRRNI-GV-LAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-----VQKPTV 158 (360)
T ss_pred CCeEEEECCCCCCHH-HHHHHH-HH-Hhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-----cCCCeE
Confidence 489999999998876 365443 43 454 699999999997764321112345677778888888765 467999
Q ss_pred EEEechhhHHHHHHHH-hcCCCCCCCcccccCCCCC
Q psy4317 133 VIGFSLGAEIAGFTGK-ALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 133 lIGHSlGa~va~~~a~-~~~~~g~v~rI~~ldPa~p 167 (235)
||||||||.++..++. +.|+ +|.++++++|++.
T Consensus 159 lvGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~ 192 (360)
T PLN02679 159 LIGNSVGSLACVIAASESTRD--LVRGLVLLNCAGG 192 (360)
T ss_pred EEEECHHHHHHHHHHHhcChh--hcCEEEEECCccc
Confidence 9999999999988776 4565 8999999998753
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.53 E-value=4.2e-14 Score=121.36 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=75.1
Q ss_pred CCcEEEEEeCCCCCCCCCchHH--HHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTT--VKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~--l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
+.|+|||+|||.++.. .|... ....+++. +|+|+++|++|.+.+.............++++.++++.+ +.+
T Consensus 29 ~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-----~~~ 101 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL-----DIE 101 (282)
T ss_pred CCCeEEEECCCCCchh-hHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc-----CCC
Confidence 4578999999987765 25321 12334444 699999999997764321111111113456677777665 678
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+++++||||||.++..++.+.++ +|.++++++|+.
T Consensus 102 ~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 136 (282)
T TIGR03343 102 KAHLVGNSMGGATALNFALEYPD--RIGKLILMGPGG 136 (282)
T ss_pred CeeEEEECchHHHHHHHHHhChH--hhceEEEECCCC
Confidence 99999999999999999998877 899999998863
No 19
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.51 E-value=1.8e-13 Score=115.85 Aligned_cols=106 Identities=14% Similarity=0.094 Sum_probs=78.1
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhh--hcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNA--ATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~--~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
.+++|||+||+.++... |+..+. .++...+|+|+++|++|.+.+..-... ..++...++++..+++.+ +.+
T Consensus 24 ~~~~vl~~hG~~g~~~~-~~~~~~-~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 96 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHE-YLENLR-ELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL-----GLD 96 (288)
T ss_pred CCCeEEEEcCCCCccHH-HHHHHH-HHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-----CCC
Confidence 36789999999877653 555554 355544799999999997653311111 245677777777777664 457
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++++|||||||.++..++...++ ++.++++++|+.
T Consensus 97 ~~~liG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 131 (288)
T TIGR01250 97 KFYLLGHSWGGMLAQEYALKYGQ--HLKGLIISSMLD 131 (288)
T ss_pred cEEEEEeehHHHHHHHHHHhCcc--ccceeeEecccc
Confidence 79999999999999999988876 799999887653
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=99.50 E-value=1.7e-13 Score=117.65 Aligned_cols=108 Identities=14% Similarity=0.133 Sum_probs=74.5
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
.+++||++|||.++.. ++..+.+.+.++ +|+|+++|++|++.+..............+++.+.+..+.+ ..+.+++
T Consensus 24 ~~~~v~llHG~~~~~~--~~~~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~-~~~~~~~ 99 (276)
T PHA02857 24 PKALVFISHGAGEHSG--RYEELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKS-TYPGVPV 99 (276)
T ss_pred CCEEEEEeCCCccccc--hHHHHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHh-hCCCCCE
Confidence 3567888899987765 345666655444 79999999999776432211222333333445555544432 1345689
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+|+||||||.+|..++...++ +|++|++++|.
T Consensus 100 ~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~ 131 (276)
T PHA02857 100 FLLGHSMGATISILAAYKNPN--LFTAMILMSPL 131 (276)
T ss_pred EEEEcCchHHHHHHHHHhCcc--ccceEEEeccc
Confidence 999999999999999988776 79999999885
No 21
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.50 E-value=1.1e-13 Score=117.62 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=70.5
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
.+.|+|||||||.++.. .|. .+... +.+ .|+|+++|++|.+.+..+. ..+...++++ +.+. ..++
T Consensus 11 ~g~~~ivllHG~~~~~~-~w~-~~~~~-L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~-------l~~~--~~~~ 75 (256)
T PRK10349 11 QGNVHLVLLHGWGLNAE-VWR-CIDEE-LSS-HFTLHLVDLPGFGRSRGFG--ALSLADMAEA-------VLQQ--APDK 75 (256)
T ss_pred CCCCeEEEECCCCCChh-HHH-HHHHH-Hhc-CCEEEEecCCCCCCCCCCC--CCCHHHHHHH-------HHhc--CCCC
Confidence 34467999999998876 365 45554 454 5999999999977644331 2233333222 2222 3589
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+++|||||||.+|..+|...++ +|.++++++|+
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~--~v~~lili~~~ 108 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPE--RVQALVTVASS 108 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChH--hhheEEEecCc
Confidence 9999999999999999998876 89999999985
No 22
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.49 E-value=1.4e-13 Score=127.87 Aligned_cols=106 Identities=18% Similarity=0.252 Sum_probs=76.6
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHH--hcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHH-HHHHHHHhcCCCC
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYL--RRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIA-AFIRFLQSKGFPL 128 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll--~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~-~~l~~l~~~~~~~ 128 (235)
.+|+|||+|||.++.. .|...+...+. .+.+|+|+++|++|++.+..-.....+++..++++. .+++.+ ..
T Consensus 200 ~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l-----g~ 273 (481)
T PLN03087 200 AKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY-----KV 273 (481)
T ss_pred CCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc-----CC
Confidence 3579999999998876 36544433332 123799999999997764321112245566666663 455543 56
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+++++|||||||.+|..++..+|+ +|.++++++|+
T Consensus 274 ~k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~ 308 (481)
T PLN03087 274 KSFHIVAHSLGCILALALAVKHPG--AVKSLTLLAPP 308 (481)
T ss_pred CCEEEEEECHHHHHHHHHHHhChH--hccEEEEECCC
Confidence 899999999999999999998887 89999999875
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.49 E-value=1.2e-13 Score=114.09 Aligned_cols=103 Identities=16% Similarity=0.149 Sum_probs=78.3
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
++|++||+||+..+.. .| ..+.. .+.. +|+|+++|++|.+.+. ......++...++++.++++.+ +.+++
T Consensus 12 ~~~~li~~hg~~~~~~-~~-~~~~~-~l~~-~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~i~~~-----~~~~v 81 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-MW-DPVLP-ALTP-DFRVLRYDKRGHGLSD-APEGPYSIEDLADDVLALLDHL-----GIERA 81 (251)
T ss_pred CCCeEEEEcCcccchh-hH-HHHHH-Hhhc-ccEEEEecCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-----CCCce
Confidence 6789999999987766 34 44544 3554 6999999999976532 1222345677777788877765 45789
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+++||||||.++..++...++ +|.++++++|+.
T Consensus 82 ~liG~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~ 114 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAARRPD--RVRALVLSNTAA 114 (251)
T ss_pred EEEEeCchHHHHHHHHHHCHH--HhHHHhhccCcc
Confidence 999999999999998888766 799999988754
No 24
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.48 E-value=1.8e-13 Score=119.16 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=76.0
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
++|+|||+|||..+.. .| ..+.+. +.+ +|+|+++|++|.+.+..-.....+.+..++++.++++.+ +.+++
T Consensus 33 ~~~~iv~lHG~~~~~~-~~-~~~~~~-l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 103 (286)
T PRK03204 33 TGPPILLCHGNPTWSF-LY-RDIIVA-LRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-----GLDRY 103 (286)
T ss_pred CCCEEEEECCCCccHH-HH-HHHHHH-HhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh-----CCCCE
Confidence 4689999999986544 24 344443 554 599999999997653311111234566777777777765 56789
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+++||||||.||..++...++ +|+++++++|.
T Consensus 104 ~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~ 135 (286)
T PRK03204 104 LSMGQDWGGPISMAVAVERAD--RVRGVVLGNTW 135 (286)
T ss_pred EEEEECccHHHHHHHHHhChh--heeEEEEECcc
Confidence 999999999999999988777 89999988764
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.48 E-value=2.5e-13 Score=111.85 Aligned_cols=103 Identities=13% Similarity=0.223 Sum_probs=73.0
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhh-hhcchHHHHHH-HHHHHHHHHhcCCCCcc
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTN-AATNTHIVGHF-IAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~-~~~~~~~v~~~-l~~~l~~l~~~~~~~~~ 130 (235)
+|+||++||+.++... | ..+...+ .+ +++|+++|+++.+.+..... ...+++..+++ +..+++.+ +.++
T Consensus 1 ~~~vv~~hG~~~~~~~-~-~~~~~~L-~~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 71 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-W-QALIELL-GP-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL-----GIEP 71 (251)
T ss_pred CCEEEEEcCCCCchhh-H-HHHHHHh-cc-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc-----CCCe
Confidence 4789999999988763 4 4555544 44 79999999999765332111 12334444444 44444432 5678
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++++||||||.+|..++...++ +|.++++++|..
T Consensus 72 ~~l~G~S~Gg~ia~~~a~~~~~--~v~~lil~~~~~ 105 (251)
T TIGR03695 72 FFLVGYSMGGRIALYYALQYPE--RVQGLILESGSP 105 (251)
T ss_pred EEEEEeccHHHHHHHHHHhCch--heeeeEEecCCC
Confidence 9999999999999999998876 799999888753
No 26
>PLN02578 hydrolase
Probab=99.48 E-value=2.2e-13 Score=122.06 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=78.9
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
++|+|||+|||.++.. .|. .+...+ .. +|+|+++|++|.+.+. .+....+....++++.++++.+ ..+++
T Consensus 85 ~g~~vvliHG~~~~~~-~w~-~~~~~l-~~-~~~v~~~D~~G~G~S~-~~~~~~~~~~~a~~l~~~i~~~-----~~~~~ 154 (354)
T PLN02578 85 EGLPIVLIHGFGASAF-HWR-YNIPEL-AK-KYKVYALDLLGFGWSD-KALIEYDAMVWRDQVADFVKEV-----VKEPA 154 (354)
T ss_pred CCCeEEEECCCCCCHH-HHH-HHHHHH-hc-CCEEEEECCCCCCCCC-CcccccCHHHHHHHHHHHHHHh-----ccCCe
Confidence 4578999999998764 354 444544 44 5999999999976532 1222345566667788888765 35789
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
++|||||||.||..+|.+.++ +|+++++++|++.
T Consensus 155 ~lvG~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~ 188 (354)
T PLN02578 155 VLVGNSLGGFTALSTAVGYPE--LVAGVALLNSAGQ 188 (354)
T ss_pred EEEEECHHHHHHHHHHHhChH--hcceEEEECCCcc
Confidence 999999999999999999887 8999999998754
No 27
>PRK10749 lysophospholipase L2; Provisional
Probab=99.48 E-value=3.5e-13 Score=119.66 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=80.6
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhh-----hhcchHHHHHHHHHHHHHHHhcC
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTN-----AATNTHIVGHFIAAFIRFLQSKG 125 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~-----~~~~~~~v~~~l~~~l~~l~~~~ 125 (235)
..+++|||+||+.++.. .+..++..+++. +|+|+++|++|.+.+..... ...+++...+++..+++.+.+.
T Consensus 52 ~~~~~vll~HG~~~~~~--~y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~- 127 (330)
T PRK10749 52 HHDRVVVICPGRIESYV--KYAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP- 127 (330)
T ss_pred CCCcEEEEECCccchHH--HHHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc-
Confidence 35679999999987654 234555555554 79999999999776432110 1135667777888888775422
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
.+..+++++||||||.+|..++...++ ++++++++.|+.
T Consensus 128 ~~~~~~~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~p~~ 166 (330)
T PRK10749 128 GPYRKRYALAHSMGGAILTLFLQRHPG--VFDAIALCAPMF 166 (330)
T ss_pred CCCCCeEEEEEcHHHHHHHHHHHhCCC--CcceEEEECchh
Confidence 356789999999999999988887776 799999998864
No 28
>PRK06489 hypothetical protein; Provisional
Probab=99.46 E-value=3.2e-13 Score=121.25 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=73.2
Q ss_pred CcEEEEEeCCCCCCCCCch-HHHHHHH-------HhcCCeEEEEEeCCCCCCCCchhh------hhcchHHHHHHHHHHH
Q psy4317 53 MTTVFYIHGFTEQANGESG-TTVKDAY-------LRRGDFNIILVDWSGLSAFPWYTN------AATNTHIVGHFIAAFI 118 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~-~~l~~~l-------l~~~~~nVi~vD~~~~~~~~~y~~------~~~~~~~v~~~l~~~l 118 (235)
.|+|||+|||.++... |. ..+.+.+ +.+ +|+||++|++|++.+..-.. ...++...++++.+++
T Consensus 69 gpplvllHG~~~~~~~-~~~~~~~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l 146 (360)
T PRK06489 69 DNAVLVLHGTGGSGKS-FLSPTFAGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLV 146 (360)
T ss_pred CCeEEEeCCCCCchhh-hccchhHHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHH
Confidence 6899999999998764 44 2443333 233 69999999999765432111 0234555555555543
Q ss_pred -HHHHhcCCCCccEE-EEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 119 -RFLQSKGFPLHKMH-VIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 119 -~~l~~~~~~~~~i~-lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+.+ +.++++ ||||||||.||..++.++|+ +|.++++++++
T Consensus 147 ~~~l-----gi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~ 188 (360)
T PRK06489 147 TEGL-----GVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQ 188 (360)
T ss_pred HHhc-----CCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccC
Confidence 433 567886 89999999999999999887 89999998875
No 29
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.44 E-value=1.4e-12 Score=112.85 Aligned_cols=110 Identities=24% Similarity=0.286 Sum_probs=79.2
Q ss_pred CCcEEEEEeCCCCCCCC--CchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 52 QMTTVFYIHGFTEQANG--ESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~--~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
.+|+|||+|||.+..+. ..+..+++.+.+ .+|+|+++|+++.+.+.... ...+.....+++..+++.+.+.+ .+
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~-~Gy~Vl~~Dl~G~G~S~g~~-~~~~~~~~~~Dv~~ai~~L~~~~--~~ 99 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAA-GGFGVLQIDLYGCGDSAGDF-AAARWDVWKEDVAAAYRWLIEQG--HP 99 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCcc-ccCCHHHHHHHHHHHHHHHHhcC--CC
Confidence 36899999999875432 123344555444 47999999999976643211 12345556677777777776543 57
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
+++|+||||||.++..++...++ ++.++++++|...
T Consensus 100 ~v~LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~ 135 (266)
T TIGR03101 100 PVTLWGLRLGALLALDAANPLAA--KCNRLVLWQPVVS 135 (266)
T ss_pred CEEEEEECHHHHHHHHHHHhCcc--ccceEEEeccccc
Confidence 89999999999999998888776 7999999998754
No 30
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.42 E-value=8.8e-13 Score=119.68 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=81.7
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhh---hhcchHHHHHHHHHHHHHHHhcCCCC
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTN---AATNTHIVGHFIAAFIRFLQSKGFPL 128 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~---~~~~~~~v~~~l~~~l~~l~~~~~~~ 128 (235)
++|+|||||||.++.. .|. .+... +.. +|+|+++|++|.+.+..-.. ...++...++++.++++.+ ..
T Consensus 126 ~~~~ivllHG~~~~~~-~w~-~~~~~-L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-----~~ 196 (383)
T PLN03084 126 NNPPVLLIHGFPSQAY-SYR-KVLPV-LSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-----KS 196 (383)
T ss_pred CCCeEEEECCCCCCHH-HHH-HHHHH-Hhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh-----CC
Confidence 4689999999998776 354 45554 454 69999999999766432111 1246777888888888876 46
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
++++|||||+||.||..++..+++ +|.++++++|+.+
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~ 233 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLT 233 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCc
Confidence 789999999999999999999887 8999999998753
No 31
>PLN02511 hydrolase
Probab=99.42 E-value=1.2e-12 Score=118.98 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=76.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
..++|+||++|||.++....|...+...++++ +|+|+++|++|.+.+.... .........+++.++++.+... .+..
T Consensus 97 ~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~-g~~vv~~d~rG~G~s~~~~-~~~~~~~~~~Dl~~~i~~l~~~-~~~~ 173 (388)
T PLN02511 97 PADAPVLILLPGLTGGSDDSYVRHMLLRARSK-GWRVVVFNSRGCADSPVTT-PQFYSASFTGDLRQVVDHVAGR-YPSA 173 (388)
T ss_pred CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC-CCEEEEEecCCCCCCCCCC-cCEEcCCchHHHHHHHHHHHHH-CCCC
Confidence 35688999999999887655766666555655 7999999999976533211 1111123345777788877632 2446
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldP 164 (235)
++++|||||||.++..++...++...|.+++++.+
T Consensus 174 ~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~ 208 (388)
T PLN02511 174 NLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCN 208 (388)
T ss_pred CEEEEEechhHHHHHHHHHhcCCCCCceEEEEECC
Confidence 89999999999999987777665213667666544
No 32
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.41 E-value=5.2e-13 Score=119.07 Aligned_cols=103 Identities=15% Similarity=0.128 Sum_probs=73.1
Q ss_pred CcEEEEEeCCCCCCCC----------CchHHHHH---HHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHH
Q psy4317 53 MTTVFYIHGFTEQANG----------ESGTTVKD---AYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIR 119 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~----------~~~~~l~~---~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~ 119 (235)
++++||+||+.++... .|+..+.. .+..+ +|+||++|++|.+.+.. ....+...++++.++++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~-~~~Vi~~Dl~G~g~s~~---~~~~~~~~a~dl~~ll~ 132 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPA-RFRLLAFDFIGADGSLD---VPIDTADQADAIALLLD 132 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCcc-ccEEEEEeCCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 4457777776666542 14444443 23234 69999999999765321 12345667788888887
Q ss_pred HHHhcCCCCcc-EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 120 FLQSKGFPLHK-MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 120 ~l~~~~~~~~~-i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
.| ..++ ++||||||||.||..++..+|+ +|.++++++++.
T Consensus 133 ~l-----~l~~~~~lvG~SmGG~vA~~~A~~~P~--~V~~LvLi~s~~ 173 (343)
T PRK08775 133 AL-----GIARLHAFVGYSYGALVGLQFASRHPA--RVRTLVVVSGAH 173 (343)
T ss_pred Hc-----CCCcceEEEEECHHHHHHHHHHHHChH--hhheEEEECccc
Confidence 75 4555 4799999999999999999887 899999999864
No 33
>KOG4409|consensus
Probab=99.40 E-value=4.2e-13 Score=117.83 Aligned_cols=107 Identities=18% Similarity=0.206 Sum_probs=77.4
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC--chhhhhcchHHHHHHHHHHHHHHH--hcC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP--WYTNAATNTHIVGHFIAAFIRFLQ--SKG 125 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--~y~~~~~~~~~v~~~l~~~l~~l~--~~~ 125 (235)
+.+++++||||||+++.. .|...+ +.+. . ..+|.++|++|.+.++ .++..... +..++++.+. ...
T Consensus 87 ~~~~~plVliHGyGAg~g-~f~~Nf-~~La-~-~~~vyaiDllG~G~SSRP~F~~d~~~------~e~~fvesiE~WR~~ 156 (365)
T KOG4409|consen 87 SANKTPLVLIHGYGAGLG-LFFRNF-DDLA-K-IRNVYAIDLLGFGRSSRPKFSIDPTT------AEKEFVESIEQWRKK 156 (365)
T ss_pred ccCCCcEEEEeccchhHH-HHHHhh-hhhh-h-cCceEEecccCCCCCCCCCCCCCccc------chHHHHHHHHHHHHH
Confidence 367889999999998876 366555 3443 3 6999999999965532 22211111 1224454444 223
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
.++++++||||||||.+|..+|..+|+ +|++|+++||.+-.
T Consensus 157 ~~L~KmilvGHSfGGYLaa~YAlKyPe--rV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 157 MGLEKMILVGHSFGGYLAAKYALKYPE--RVEKLILVSPWGFP 197 (365)
T ss_pred cCCcceeEeeccchHHHHHHHHHhChH--hhceEEEecccccc
Confidence 578899999999999999999999998 89999999999754
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.40 E-value=2.4e-12 Score=117.53 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=72.5
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHH----HHHHHHHHHHHHHhcCC
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHI----VGHFIAAFIRFLQSKGF 126 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~----v~~~l~~~l~~l~~~~~ 126 (235)
.++|+|||+|||.++.. .|...+ .. +.+ +|+|+++|++|.+.+............ +.+++.++++. +
T Consensus 103 ~~~p~vvllHG~~~~~~-~~~~~~-~~-L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-----l 173 (402)
T PLN02894 103 EDAPTLVMVHGYGASQG-FFFRNF-DA-LAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA-----K 173 (402)
T ss_pred CCCCEEEEECCCCcchh-HHHHHH-HH-HHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH-----c
Confidence 45789999999988765 355443 44 444 599999999997653321111111122 22333333332 2
Q ss_pred CCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
+.++++|+||||||.+|..++...++ +|.++++++|++.
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~~~ 212 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYALKHPE--HVQHLILVGPAGF 212 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCch--hhcEEEEECCccc
Confidence 56789999999999999999998877 8999999998753
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.39 E-value=1.4e-12 Score=107.66 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=68.8
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
++|+|||+|||.++.. .| ..+... +.. +++|+++|++|.+.+... ...++..+++++. + + ..+++
T Consensus 3 g~~~iv~~HG~~~~~~-~~-~~~~~~-l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~---~-~-----~~~~~ 67 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAE-VF-RCLDEE-LSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIA---A-Q-----APDPA 67 (245)
T ss_pred CCceEEEEcCCCCchh-hH-HHHHHh-hcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHH---H-h-----CCCCe
Confidence 4588999999988876 35 455544 444 699999999997653321 1123333333222 1 1 13689
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++|||||||.++..++...++ ++.+++++++..
T Consensus 68 ~lvG~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~ 100 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAATHPD--RVRALVTVASSP 100 (245)
T ss_pred EEEEEcHHHHHHHHHHHHCHH--hhheeeEecCCc
Confidence 999999999999999988776 799999988754
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.38 E-value=3.2e-12 Score=114.11 Aligned_cols=104 Identities=24% Similarity=0.266 Sum_probs=78.1
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
+++|+|||+|||.++... |. .+... +.+ +|+|+++|+++.+.+.. .....+...+++++.++++.+ +.++
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~-~~~~~-l~~-~~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~ 198 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WL-FNHAA-LAA-GRPVIALDLPGHGASSK-AVGAGSLDELAAAVLAFLDAL-----GIER 198 (371)
T ss_pred CCCCeEEEECCCCCccch-HH-HHHHH-Hhc-CCEEEEEcCCCCCCCCC-CCCCCCHHHHHHHHHHHHHhc-----CCcc
Confidence 357899999999998773 54 44443 455 49999999999765321 112345667777777777654 5678
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++|+||||||.+|..++...+. ++.++++++|..
T Consensus 199 ~~lvG~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~ 232 (371)
T PRK14875 199 AHLVGHSMGGAVALRLAARAPQ--RVASLTLIAPAG 232 (371)
T ss_pred EEEEeechHHHHHHHHHHhCch--heeEEEEECcCC
Confidence 9999999999999998888766 799999998763
No 37
>KOG4178|consensus
Probab=99.37 E-value=6.2e-12 Score=109.82 Aligned_cols=109 Identities=19% Similarity=0.221 Sum_probs=86.0
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhh-hhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 49 MNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTN-AATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~-~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
...+.|.|+++|||..++.+ |..++ ..+..+ +|+|+++|++|.+.+..=.. ...++..++.++..+++.| .
T Consensus 40 g~~~gP~illlHGfPe~wys-wr~q~-~~la~~-~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L-----g 111 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYS-WRHQI-PGLASR-GYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL-----G 111 (322)
T ss_pred cCCCCCEEEEEccCCccchh-hhhhh-hhhhhc-ceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh-----c
Confidence 46689999999999999884 76665 445554 59999999999766321111 3356778888888999887 4
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
.++++++||++||.||..++..+|+ +|.+++.+.-..+
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFP 149 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChh--hcceEEEecCCCC
Confidence 7999999999999999999999998 8999988764443
No 38
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.36 E-value=1.3e-12 Score=116.80 Aligned_cols=107 Identities=14% Similarity=0.048 Sum_probs=77.8
Q ss_pred CCcEEEEEeCCCCCCCCC---------chHHHH---HHHHhcCCeEEEEEeCCC--CCCCCc---------hh--hhhcc
Q psy4317 52 QMTTVFYIHGFTEQANGE---------SGTTVK---DAYLRRGDFNIILVDWSG--LSAFPW---------YT--NAATN 106 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~---------~~~~l~---~~ll~~~~~nVi~vD~~~--~~~~~~---------y~--~~~~~ 106 (235)
.+|+|||+||+.++.... |+..+. ..++. .+|+||++|++| ++++.. |. .....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~ 108 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLIT 108 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC-CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCc
Confidence 457999999999976432 454443 13334 479999999999 433211 11 01245
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcc-EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 107 THIVGHFIAAFIRFLQSKGFPLHK-MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 107 ~~~v~~~l~~~l~~l~~~~~~~~~-i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++..++++.++++.| ..++ ++||||||||.+|..++..+|+ +|.+++++++..
T Consensus 109 ~~~~~~~~~~~~~~l-----~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 162 (351)
T TIGR01392 109 IRDDVKAQKLLLDHL-----GIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHHHc-----CCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCC
Confidence 677778888888765 4577 9999999999999999988887 899999998754
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.34 E-value=8.4e-12 Score=109.46 Aligned_cols=103 Identities=15% Similarity=0.079 Sum_probs=73.0
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCch-hhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWY-TNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y-~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
+.++|||+||+.++... + .+... +...+|+|+++|++|.+.+..- .....+...+++++..+++.+ +.++
T Consensus 26 ~~~~lvllHG~~~~~~~-~--~~~~~-~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-----~~~~ 96 (306)
T TIGR01249 26 DGKPVVFLHGGPGSGTD-P--GCRRF-FDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL-----GIKN 96 (306)
T ss_pred CCCEEEEECCCCCCCCC-H--HHHhc-cCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-----CCCC
Confidence 45789999999877652 1 22222 3223699999999997653311 001234556666777676654 5678
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
++++||||||.++..++...++ +|.+++++++.
T Consensus 97 ~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~ 129 (306)
T TIGR01249 97 WLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIF 129 (306)
T ss_pred EEEEEECHHHHHHHHHHHHChH--hhhhheeeccc
Confidence 9999999999999999988876 79999988764
No 40
>PRK10985 putative hydrolase; Provisional
Probab=99.34 E-value=9.1e-12 Score=110.35 Aligned_cols=112 Identities=18% Similarity=0.218 Sum_probs=72.2
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
..+|+||++||+.++....+...+...+.++ ||+|+++|++|.+.+..-......... ..++..+++.+.+. .+..+
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~~~~~~~-~~D~~~~i~~l~~~-~~~~~ 132 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHRIYHSGE-TEDARFFLRWLQRE-FGHVP 132 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcceECCCc-hHHHHHHHHHHHHh-CCCCC
Confidence 3578999999999887655666666655554 899999999996542211000011111 24566666666532 24568
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
++++||||||.++..++...++..++.+++.+.|.
T Consensus 133 ~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p 167 (324)
T PRK10985 133 TAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAP 167 (324)
T ss_pred EEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCC
Confidence 99999999999876555444331147887777664
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.32 E-value=1.2e-11 Score=112.64 Aligned_cols=111 Identities=20% Similarity=0.247 Sum_probs=77.6
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
+.+++|||+|||.++.. .+..+++.+.++ +|+|+++||+|++.+..-.....+.+...+++..+++.+... .+..+
T Consensus 134 ~~~~~Vl~lHG~~~~~~--~~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~-~~~~~ 209 (395)
T PLN02652 134 EMRGILIIIHGLNEHSG--RYLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSE-NPGVP 209 (395)
T ss_pred CCceEEEEECCchHHHH--HHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHh-CCCCC
Confidence 35679999999988754 244566655544 799999999997653321111234556667888888887632 23347
Q ss_pred EEEEEechhhHHHHHHHHhcCCC-CCCCcccccCCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTV-DKLPRITGLDPAF 166 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~-g~v~rI~~ldPa~ 166 (235)
++|+||||||.++..++.+ ++. .+|+.+++..|+.
T Consensus 210 i~lvGhSmGG~ial~~a~~-p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 210 CFLFGHSTGGAVVLKAASY-PSIEDKLEGIVLTSPAL 245 (395)
T ss_pred EEEEEECHHHHHHHHHHhc-cCcccccceEEEECccc
Confidence 9999999999999987764 321 2789999888864
No 42
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.31 E-value=6.8e-12 Score=113.59 Aligned_cols=107 Identities=12% Similarity=0.029 Sum_probs=77.9
Q ss_pred CcEEEEEeCCCCCCCC-----------CchHHHHH---HHHhcCCeEEEEEeCCC--CCCCC-c---------hhh--hh
Q psy4317 53 MTTVFYIHGFTEQANG-----------ESGTTVKD---AYLRRGDFNIILVDWSG--LSAFP-W---------YTN--AA 104 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~-----------~~~~~l~~---~ll~~~~~nVi~vD~~~--~~~~~-~---------y~~--~~ 104 (235)
+|+|||+||+.++... .|+..++. .++.. +|+||++|++| ++++. . |.. ..
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTD-RYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCcc-ceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 6899999999999863 13444431 23343 79999999987 22211 0 100 13
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCcc-EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 105 TNTHIVGHFIAAFIRFLQSKGFPLHK-MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 105 ~~~~~v~~~l~~~l~~l~~~~~~~~~-i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
.++...++++.++++.| ..++ ++||||||||.+|..++..+++ +|.++++++++..
T Consensus 127 ~~~~~~~~~~~~~l~~l-----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL-----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh-----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcc
Confidence 46777888888888876 5677 5999999999999999999887 8999999997654
No 43
>PRK11071 esterase YqiA; Provisional
Probab=99.30 E-value=1.2e-11 Score=101.76 Aligned_cols=91 Identities=18% Similarity=0.322 Sum_probs=64.6
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhc--CCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRR--GDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~--~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
|+|||+|||.++..+ |.......++.+ .+++|+++|+++.+ +..++.+.++++.+ ..+++
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-----~~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH-----GGDPL 63 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-----CCCCe
Confidence 689999999999885 543332344432 36999999999652 12344555555543 45789
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
++|||||||.+|..++...+. ++++++|+..
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~ 94 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFML-----PAVVVNPAVR 94 (190)
T ss_pred EEEEECHHHHHHHHHHHHcCC-----CEEEECCCCC
Confidence 999999999999999998752 3567877643
No 44
>KOG1454|consensus
Probab=99.27 E-value=2.4e-11 Score=108.13 Aligned_cols=104 Identities=14% Similarity=0.199 Sum_probs=71.8
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhh-hcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNA-ATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~-~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
.++|+||++|||.++.. .|... ...+.+..|+.|.++|..|++.+...+.. ..++......+..++... ..+
T Consensus 56 ~~~~pvlllHGF~~~~~-~w~~~-~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-----~~~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSF-SWRRV-VPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-----FVE 128 (326)
T ss_pred CCCCcEEEeccccCCcc-cHhhh-ccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-----cCc
Confidence 47889999999999765 36544 44454444599999999996632333322 233433333333333332 356
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLD 163 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ld 163 (235)
++++|||||||.+|..+|..+|+ .|+.++++|
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~ 160 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLD 160 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcc--cccceeeec
Confidence 79999999999999999999998 799999555
No 45
>PLN00021 chlorophyllase
Probab=99.26 E-value=3.7e-11 Score=106.35 Aligned_cols=114 Identities=16% Similarity=0.174 Sum_probs=71.9
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHh--cCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQS--KGFP 127 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~--~~~~ 127 (235)
....|+|||+|||..+.. ++..+.+.+.++ ||.|+++|+++.+.. ...........+...+.+.++.+.. ...+
T Consensus 49 ~g~~PvVv~lHG~~~~~~--~y~~l~~~Las~-G~~VvapD~~g~~~~-~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d 124 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNS--FYSQLLQHIASH-GFIVVAPQLYTLAGP-DGTDEIKDAAAVINWLSSGLAAVLPEGVRPD 124 (313)
T ss_pred CCCCCEEEEECCCCCCcc--cHHHHHHHHHhC-CCEEEEecCCCcCCC-CchhhHHHHHHHHHHHHhhhhhhcccccccC
Confidence 346789999999988754 456666665554 799999999874321 1111111111111111111111111 1256
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCC---CCCcccccCCCCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVD---KLPRITGLDPAFP 167 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g---~v~rI~~ldPa~p 167 (235)
.++++|+||||||.+|..+|...++.. ++..++++||...
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 789999999999999999887765421 6899999999653
No 46
>PRK10566 esterase; Provisional
Probab=99.25 E-value=5.7e-11 Score=100.48 Aligned_cols=99 Identities=18% Similarity=0.072 Sum_probs=66.1
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhh-hh----cchHHHHHHHHHHHHHHHhc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTN-AA----TNTHIVGHFIAAFIRFLQSK 124 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~-~~----~~~~~v~~~l~~~l~~l~~~ 124 (235)
+..|+||++||+.++.. ++..+...+.+ .||+|+++|+++.+.+. .-.. .. .......+++..+++.+.+.
T Consensus 25 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~-~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL--VYSYFAVALAQ-AGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREE 101 (249)
T ss_pred CCCCEEEEeCCCCcccc--hHHHHHHHHHh-CCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 45789999999988765 34455555544 48999999999864311 0000 00 01112234556667766644
Q ss_pred C-CCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 125 G-FPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 125 ~-~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
+ ++.++|.++||||||.++..++...+.
T Consensus 102 ~~~~~~~i~v~G~S~Gg~~al~~~~~~~~ 130 (249)
T PRK10566 102 GWLLDDRLAVGGASMGGMTALGIMARHPW 130 (249)
T ss_pred CCcCccceeEEeecccHHHHHHHHHhCCC
Confidence 4 678999999999999999998877553
No 47
>PRK07581 hypothetical protein; Validated
Probab=99.25 E-value=1.5e-11 Score=109.21 Aligned_cols=109 Identities=16% Similarity=0.162 Sum_probs=65.1
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHH--HHHhcCCeEEEEEeCCCCCCCCchhhh--hcch-----HHHHHHHHHHHHHHHh
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKD--AYLRRGDFNIILVDWSGLSAFPWYTNA--ATNT-----HIVGHFIAAFIRFLQS 123 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~--~ll~~~~~nVi~vD~~~~~~~~~y~~~--~~~~-----~~v~~~l~~~l~~l~~ 123 (235)
.|+|+++||+.++... |. .+.. ..+...+|+||++|++|.+.+..-... ..++ ..++++++.....|.+
T Consensus 41 ~~~vll~~~~~~~~~~-~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (339)
T PRK07581 41 DNAILYPTWYSGTHQD-NE-WLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE 118 (339)
T ss_pred CCEEEEeCCCCCCccc-ch-hhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH
Confidence 3456666666655442 32 2211 123323699999999997664211100 0111 1234455542222221
Q ss_pred cCCCCcc-EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 124 KGFPLHK-MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 124 ~~~~~~~-i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
.+..++ ++||||||||.||..+|..+|+ +|.+|++++.+.
T Consensus 119 -~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~ 159 (339)
T PRK07581 119 -KFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTA 159 (339)
T ss_pred -HhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCC
Confidence 025678 5899999999999999999987 899999997643
No 48
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.24 E-value=4.8e-11 Score=104.90 Aligned_cols=109 Identities=19% Similarity=0.244 Sum_probs=80.5
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhhhhcchHHHHHHHHHHHHHHHhcCCCCccEE
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMH 132 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~ 132 (235)
.+||++||....... + ..++..+..+ ||.|+++||||.+.+. .-.....++...-.++..+++...+. ....+++
T Consensus 35 g~Vvl~HG~~Eh~~r-y-~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~-~~~~p~~ 110 (298)
T COG2267 35 GVVVLVHGLGEHSGR-Y-EELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEP-DPGLPVF 110 (298)
T ss_pred cEEEEecCchHHHHH-H-HHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhcc-CCCCCeE
Confidence 689999999988763 3 4566666655 8999999999977653 12222334566666777777766432 2457899
Q ss_pred EEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 133 VIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 133 lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
|+||||||-||..++...+. +|.++++..|+-.+
T Consensus 111 l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l 144 (298)
T COG2267 111 LLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGL 144 (298)
T ss_pred EEEeCcHHHHHHHHHHhCCc--cccEEEEECccccC
Confidence 99999999999998888775 89999888776544
No 49
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.23 E-value=4.3e-11 Score=92.43 Aligned_cols=93 Identities=16% Similarity=0.273 Sum_probs=68.3
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEE
Q psy4317 55 TVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVI 134 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lI 134 (235)
+|||+||+.++... +..+.+.+.++ ||+|+.+|+++.+.+.. . .++.++++.+.+...+.+++.++
T Consensus 1 ~vv~~HG~~~~~~~--~~~~~~~l~~~-G~~v~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~i~l~ 66 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD--YQPLAEALAEQ-GYAVVAFDYPGHGDSDG----A-------DAVERVLADIRAGYPDPDRIILI 66 (145)
T ss_dssp EEEEECTTTTTTHH--HHHHHHHHHHT-TEEEEEESCTTSTTSHH----S-------HHHHHHHHHHHHHHCTCCEEEEE
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHHC-CCEEEEEecCCCCccch----h-------HHHHHHHHHHHhhcCCCCcEEEE
Confidence 58999999998652 45666666665 89999999998766311 1 13444444432111278999999
Q ss_pred EechhhHHHHHHHHhcCCCCCCCcccccCC
Q psy4317 135 GFSLGAEIAGFTGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 135 GHSlGa~va~~~a~~~~~~g~v~rI~~ldP 164 (235)
||||||.++..++... . +++.++.+.|
T Consensus 67 G~S~Gg~~a~~~~~~~-~--~v~~~v~~~~ 93 (145)
T PF12695_consen 67 GHSMGGAIAANLAARN-P--RVKAVVLLSP 93 (145)
T ss_dssp EETHHHHHHHHHHHHS-T--TESEEEEESE
T ss_pred EEccCcHHHHHHhhhc-c--ceeEEEEecC
Confidence 9999999999988875 3 7999999988
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.20 E-value=5.9e-11 Score=124.37 Aligned_cols=103 Identities=17% Similarity=0.325 Sum_probs=78.8
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchh-------hhhcchHHHHHHHHHHHHHHHhc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYT-------NAATNTHIVGHFIAAFIRFLQSK 124 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~-------~~~~~~~~v~~~l~~~l~~l~~~ 124 (235)
++|+|||+|||.++.. .|.. +... +.. +|+|+++|++|++.+..-. ....+++.+++++.++++.+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~-~~~~-L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l--- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIP-IMKA-ISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI--- 1442 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHH-HHHH-HhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---
Confidence 4689999999999987 3654 4444 444 5999999999976532110 11235677777888787765
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
..++++|+||||||.||..++..+|+ +|++++++++.
T Consensus 1443 --~~~~v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~ 1479 (1655)
T PLN02980 1443 --TPGKVTLVGYSMGARIALYMALRFSD--KIEGAVIISGS 1479 (1655)
T ss_pred --CCCCEEEEEECHHHHHHHHHHHhChH--hhCEEEEECCC
Confidence 46799999999999999999998887 89999999864
No 51
>KOG2564|consensus
Probab=99.20 E-value=9.9e-11 Score=100.10 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=79.9
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
.+..|.+++.||.+.+.-+ | ..++.++..+-..+++++|+|+++++..-.....+.+.+++++..+++.+. +=.+.
T Consensus 71 ~t~gpil~l~HG~G~S~LS-f-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~f--ge~~~ 146 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALS-F-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELF--GELPP 146 (343)
T ss_pred CCCccEEEEeecCcccchh-H-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHh--ccCCC
Confidence 4578899999999887753 4 455667776667889999999988753223344567788889988888875 32467
Q ss_pred cEEEEEechhhHHHHHHHHh--cCCCCCCCcccccCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKA--LGTVDKLPRITGLDP 164 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~--~~~~g~v~rI~~ldP 164 (235)
+|.||||||||.||.+.|.. +| .+..|+.+|-
T Consensus 147 ~iilVGHSmGGaIav~~a~~k~lp---sl~Gl~viDV 180 (343)
T KOG2564|consen 147 QIILVGHSMGGAIAVHTAASKTLP---SLAGLVVIDV 180 (343)
T ss_pred ceEEEeccccchhhhhhhhhhhch---hhhceEEEEE
Confidence 89999999999999876554 44 3666666664
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.19 E-value=3.4e-10 Score=98.11 Aligned_cols=108 Identities=17% Similarity=0.149 Sum_probs=74.3
Q ss_pred CCcEEEEEeCCCCCCCCCc--hHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 52 QMTTVFYIHGFTEQANGES--GTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~--~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
+++.||++||+.+.....+ +..+.+.+.+ .+|+|+++|++|.+.+.... ...+...+++.++++.+.+.--..+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~-~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAE-AGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 4567889998775443222 2345555544 47999999999977643211 2344555678888887764311346
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+++++||||||.++..++.. +. +|+++++++|..
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~--~v~~lil~~p~~ 134 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DL--RVAGLVLLNPWV 134 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CC--CccEEEEECCcc
Confidence 89999999999999988765 33 799999998763
No 53
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.16 E-value=2e-10 Score=97.58 Aligned_cols=116 Identities=15% Similarity=0.266 Sum_probs=82.9
Q ss_pred CCCCcEEEEEeCCCCCCCCCc--hHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGES--GTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~--~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
.+++..+||||||..+..... ..++.. .+... ..+|.+.|+..+....|.....+....+..++++|..|.+. ..
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~-~~~~~-~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~-~~ 91 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAH-DLGFP-GVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA-PG 91 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHH-HhCCC-ceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-cC
Confidence 457889999999998865321 122322 23232 48999999997665568776677778888899999988754 24
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCC------C-CCCcccccCCCCCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTV------D-KLPRITGLDPAFPL 168 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~------g-~v~rI~~ldPa~p~ 168 (235)
..+|||++||||+.|...+-+.+... . ++..|+++.|.-+.
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 68999999999999988776553321 1 67788888776554
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.16 E-value=2.5e-10 Score=100.25 Aligned_cols=107 Identities=14% Similarity=0.139 Sum_probs=74.2
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCC-CCC-CchhhhhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGL-SAF-PWYTNAATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~-~~~-~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
...+++||+.||++++.. .+..+++.|. +.|++|+.+|++++ +.+ ..|.... +..-..++..+++++.+. .
T Consensus 34 ~~~~~~vIi~HGf~~~~~--~~~~~A~~La-~~G~~vLrfD~rg~~GeS~G~~~~~t--~s~g~~Dl~aaid~lk~~--~ 106 (307)
T PRK13604 34 PKKNNTILIASGFARRMD--HFAGLAEYLS-SNGFHVIRYDSLHHVGLSSGTIDEFT--MSIGKNSLLTVVDWLNTR--G 106 (307)
T ss_pred CCCCCEEEEeCCCCCChH--HHHHHHHHHH-HCCCEEEEecCCCCCCCCCCccccCc--ccccHHHHHHHHHHHHhc--C
Confidence 345689999999999753 3566776554 45899999998764 432 3332211 111235777778888654 3
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
.++|.|+||||||.+|..+|... +++.+++..|...
T Consensus 107 ~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~ 142 (307)
T PRK13604 107 INNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVN 142 (307)
T ss_pred CCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCccc
Confidence 57899999999999987776642 5777888878766
No 55
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.14 E-value=2.9e-10 Score=104.31 Aligned_cols=108 Identities=15% Similarity=0.213 Sum_probs=72.1
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHh-cCCCCc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQS-KGFPLH 129 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~-~~~~~~ 129 (235)
...|+||++||+.+.....| ..+...+..+ ||+|+++|++|.+.+..+.. ..+.... ...+++.|.+ ..++.+
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~-~~~~~~La~~-Gy~vl~~D~pG~G~s~~~~~-~~d~~~~---~~avld~l~~~~~vd~~ 265 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYY-RLFRDYLAPR-GIAMLTIDMPSVGFSSKWKL-TQDSSLL---HQAVLNALPNVPWVDHT 265 (414)
T ss_pred CCccEEEEeCCcccchhhhH-HHHHHHHHhC-CCEEEEECCCCCCCCCCCCc-cccHHHH---HHHHHHHHHhCcccCcc
Confidence 45677777777766544334 3455555554 79999999999765432211 1122222 2345555543 236789
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+|.++||||||.+|..+|...++ +|+.++.++|..
T Consensus 266 ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~ 300 (414)
T PRK05077 266 RVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVV 300 (414)
T ss_pred cEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCcc
Confidence 99999999999999998887665 799999988764
No 56
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.14 E-value=3.8e-10 Score=93.66 Aligned_cols=110 Identities=17% Similarity=0.263 Sum_probs=80.3
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhhhhcchHHHHHHHHHHHHHHHhcCC
Q psy4317 48 HMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTNAATNTHIVGHFIAAFIRFLQSKGF 126 (235)
Q Consensus 48 ~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~~~~~~~~v~~~l~~~l~~l~~~~~ 126 (235)
.|..++..|++||||+|+... ++.+.+ +|++.||.|.++.++|++... .+. ..+.++--+++.+..++|.+.++
T Consensus 10 ~f~~G~~AVLllHGFTGt~~D--vr~Lgr-~L~e~GyTv~aP~ypGHG~~~e~fl--~t~~~DW~~~v~d~Y~~L~~~gy 84 (243)
T COG1647 10 TFEGGNRAVLLLHGFTGTPRD--VRMLGR-YLNENGYTVYAPRYPGHGTLPEDFL--KTTPRDWWEDVEDGYRDLKEAGY 84 (243)
T ss_pred eeccCCEEEEEEeccCCCcHH--HHHHHH-HHHHCCceEecCCCCCCCCCHHHHh--cCCHHHHHHHHHHHHHHHHHcCC
Confidence 356677899999999999874 667765 556668999999999987632 111 12233444455555666655554
Q ss_pred CCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
+.|.++|.||||-+|+.+|.+++ +++|+.+.++.-.
T Consensus 85 --~eI~v~GlSmGGv~alkla~~~p----~K~iv~m~a~~~~ 120 (243)
T COG1647 85 --DEIAVVGLSMGGVFALKLAYHYP----PKKIVPMCAPVNV 120 (243)
T ss_pred --CeEEEEeecchhHHHHHHHhhCC----ccceeeecCCccc
Confidence 78999999999999999999985 6788888766543
No 57
>KOG1455|consensus
Probab=99.12 E-value=1.1e-09 Score=94.72 Aligned_cols=114 Identities=13% Similarity=0.139 Sum_probs=80.9
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCCCCc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGFPLH 129 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~~~~ 129 (235)
+.+-.|+++||+.+..+. .+..++..+... ||-|+++||.|++.+..-..-+.++..+.+++..+++.+. +.....-
T Consensus 52 ~pr~lv~~~HG~g~~~s~-~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~l 129 (313)
T KOG1455|consen 52 EPRGLVFLCHGYGEHSSW-RYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGL 129 (313)
T ss_pred CCceEEEEEcCCcccchh-hHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCC
Confidence 345589999999988763 245566655554 8999999999976644333335677778788888887655 2223444
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
...|.||||||.||..++.+-|. ...+++++.|--+.
T Consensus 130 p~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i 166 (313)
T KOG1455|consen 130 PRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKI 166 (313)
T ss_pred CeeeeecCcchHHHHHHHhhCCc--ccccceeeeccccc
Confidence 67899999999999999987555 56666666554333
No 58
>PRK05855 short chain dehydrogenase; Validated
Probab=99.12 E-value=3.1e-10 Score=106.87 Aligned_cols=90 Identities=18% Similarity=0.181 Sum_probs=65.7
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCch-hhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWY-TNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y-~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
+++|+|||+|||.++.. .|. .+... +.+ +|+|+++|++|.+.+..- .....+.+..++++..+++.+ ..+
T Consensus 23 ~~~~~ivllHG~~~~~~-~w~-~~~~~-L~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l-----~~~ 93 (582)
T PRK05855 23 PDRPTVVLVHGYPDNHE-VWD-GVAPL-LAD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV-----SPD 93 (582)
T ss_pred CCCCeEEEEcCCCchHH-HHH-HHHHH-hhc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh-----CCC
Confidence 34789999999998876 354 44444 454 699999999997664211 112345778888898888876 334
Q ss_pred c-EEEEEechhhHHHHHHHHh
Q psy4317 130 K-MHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 130 ~-i~lIGHSlGa~va~~~a~~ 149 (235)
+ ++||||||||.++..++..
T Consensus 94 ~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 94 RPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CcEEEEecChHHHHHHHHHhC
Confidence 4 9999999999998877666
No 59
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.11 E-value=5.5e-10 Score=88.42 Aligned_cols=108 Identities=32% Similarity=0.518 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCC--CCCCcccccCCCCCCCCCCCCCCCCCccCCCeeE
Q psy4317 110 VGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTV--DKLPRITGLDPAFPLYGFTGGEGHLSKEDADFVD 187 (235)
Q Consensus 110 v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~--g~v~rI~~ldPa~p~f~~~~~~~~l~~~dA~~v~ 187 (235)
+.+.+.+.++...+. .+..+|+++||||||+||..++..+... .++.+++.++|+.+....... ..+.+..+.++.
T Consensus 10 ~~~~i~~~~~~~~~~-~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~-~~~~~~~~~~~~ 87 (153)
T cd00741 10 LANLVLPLLKSALAQ-YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE-DRLDPSDALFVD 87 (153)
T ss_pred HHHHHHHHHHHHHHH-CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH-HhhhccCCccEE
Confidence 344444555443321 3678999999999999999999988652 267889999999887653211 245667789999
Q ss_pred EEeeCCCCCCCc------ccccceeeecCCCCCCCCCCC
Q psy4317 188 VIHTDGGILGFP------VPIGHADFFPNGGFPVQPGCH 220 (235)
Q Consensus 188 viht~~~~~G~~------~~~g~~d~y~ngg~~~qpgC~ 220 (235)
.||...+..+.. ...+..+||+|++. .++.|.
T Consensus 88 ~i~~~~D~v~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~ 125 (153)
T cd00741 88 RIVNDNDIVPRLPPGGEGYPHGGAEFYINGGK-SQPGCC 125 (153)
T ss_pred EEEECCCccCCCCCCcCCCeecceEEEECCCC-CCCccc
Confidence 999988776644 56788999999998 565554
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.10 E-value=3.1e-10 Score=94.51 Aligned_cols=110 Identities=13% Similarity=0.090 Sum_probs=72.0
Q ss_pred CCCcEEEEEeCCCCCCCCCch--HHHHHHHHhcCCeEEEEEeCCCCCCCC-c---hhhhh-cchHHHHHHHHHHHHHHH-
Q psy4317 51 RQMTTVFYIHGFTEQANGESG--TTVKDAYLRRGDFNIILVDWSGLSAFP-W---YTNAA-TNTHIVGHFIAAFIRFLQ- 122 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~--~~l~~~ll~~~~~nVi~vD~~~~~~~~-~---y~~~~-~~~~~v~~~l~~~l~~l~- 122 (235)
...|+||++||+.++... +. ..+. .++.+.++.|+++|+++.+... . |.... ........++.++++.+.
T Consensus 11 ~~~P~vv~lHG~~~~~~~-~~~~~~~~-~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 11 GPRALVLALHGCGQTASA-YVIDWGWK-AAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCEEEEeCCCCCCHHH-HhhhcChH-HHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 457999999999987652 21 0122 3444458999999999853211 1 11100 001112245667777766
Q ss_pred hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCC
Q psy4317 123 SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 123 ~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldP 164 (235)
+..++.++|.|+||||||.++..++...++ ++..++.+..
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g 128 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAG 128 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecC
Confidence 456788899999999999999999888776 6777776653
No 61
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.10 E-value=6.4e-10 Score=97.40 Aligned_cols=99 Identities=20% Similarity=0.308 Sum_probs=72.1
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
+..+|+||++||..|+.++++...+..++.++ +|.|+++|||+.+.+.+-..-... .-...+++.+++++.+.. ...
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~r-g~~~Vv~~~Rgcs~~~n~~p~~yh-~G~t~D~~~~l~~l~~~~-~~r 148 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSRR-GWLVVVFHFRGCSGEANTSPRLYH-SGETEDIRFFLDWLKARF-PPR 148 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHhc-CCeEEEEecccccCCcccCcceec-ccchhHHHHHHHHHHHhC-CCC
Confidence 55678999999999999988888888877666 699999999997653321110011 111256778888876433 568
Q ss_pred cEEEEEechhh-HHHHHHHHhcC
Q psy4317 130 KMHVIGFSLGA-EIAGFTGKALG 151 (235)
Q Consensus 130 ~i~lIGHSlGa-~va~~~a~~~~ 151 (235)
++..||+|||| +++-+.+.+-.
T Consensus 149 ~~~avG~SLGgnmLa~ylgeeg~ 171 (345)
T COG0429 149 PLYAVGFSLGGNMLANYLGEEGD 171 (345)
T ss_pred ceEEEEecccHHHHHHHHHhhcc
Confidence 99999999999 77777777643
No 62
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.06 E-value=1.6e-09 Score=93.92 Aligned_cols=109 Identities=12% Similarity=0.165 Sum_probs=69.0
Q ss_pred CCcEEEEEeCCCCCCCCCchHH-HHHHHHhcCCeEEEEEeCCC--CCCC------------Cchhhhh--------cchH
Q psy4317 52 QMTTVFYIHGFTEQANGESGTT-VKDAYLRRGDFNIILVDWSG--LSAF------------PWYTNAA--------TNTH 108 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~-l~~~ll~~~~~nVi~vD~~~--~~~~------------~~y~~~~--------~~~~ 108 (235)
+.|+|+++||+.++... |... ....++.+.++.||++|... .+.+ ..|.... ....
T Consensus 41 ~~P~vvllHG~~~~~~~-~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHEN-FMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCCCCccH-HHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 47999999999988763 4321 12345555579999999842 2110 1111110 0112
Q ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 109 IVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 109 ~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
.+.++|..+++. ..+++.+++.|+||||||++|..++...++ ++..++++.|.
T Consensus 120 ~~~~~l~~~~~~--~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~ 172 (275)
T TIGR02821 120 YIVQELPALVAA--QFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHHh--hCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEEEECCc
Confidence 223333333332 235678899999999999999999998887 78888877665
No 63
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.05 E-value=1.1e-09 Score=97.70 Aligned_cols=113 Identities=13% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCcEEEEEeCCCCCCCCCch------------------------HHHHHHHHhcCCeEEEEEeCCCCCCCCch---hhhh
Q psy4317 52 QMTTVFYIHGFTEQANGESG------------------------TTVKDAYLRRGDFNIILVDWSGLSAFPWY---TNAA 104 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~------------------------~~l~~~ll~~~~~nVi~vD~~~~~~~~~y---~~~~ 104 (235)
.+.+|+++||+.+.....+. ..+++.+.++ ||+|+++|++|.+.+... ....
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~-G~~V~~~D~rGHG~S~~~~~~~g~~ 98 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN-GYSVYGLDLQGHGESDGLQNLRGHI 98 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC-CCcEEEecccccCCCccccccccch
Confidence 46699999999988753211 2345555554 799999999997653321 1112
Q ss_pred cchHHHHHHHHHHHHHHHhc------------------CCC-CccEEEEEechhhHHHHHHHHhcCCC-----C-CCCcc
Q psy4317 105 TNTHIVGHFIAAFIRFLQSK------------------GFP-LHKMHVIGFSLGAEIAGFTGKALGTV-----D-KLPRI 159 (235)
Q Consensus 105 ~~~~~v~~~l~~~l~~l~~~------------------~~~-~~~i~lIGHSlGa~va~~~a~~~~~~-----g-~v~rI 159 (235)
.+++.+.+++.++++.+.+. ..+ ...+.|+||||||.|+..++..++.. + .+..+
T Consensus 99 ~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~ 178 (332)
T TIGR01607 99 NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGC 178 (332)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceE
Confidence 45677777788888765431 112 34699999999999999877654321 1 46666
Q ss_pred cccCCC
Q psy4317 160 TGLDPA 165 (235)
Q Consensus 160 ~~ldPa 165 (235)
+.+.|.
T Consensus 179 i~~s~~ 184 (332)
T TIGR01607 179 ISLSGM 184 (332)
T ss_pred EEeccc
Confidence 655554
No 64
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.04 E-value=7.6e-10 Score=91.05 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=61.2
Q ss_pred eEEEEEeCCCCCCCCc---hhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccc
Q psy4317 84 FNIILVDWSGLSAFPW---YTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRIT 160 (235)
Q Consensus 84 ~nVi~vD~~~~~~~~~---y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~ 160 (235)
|+|+++|++|.+.+.. ..........+++++..+++.+ +.+++++|||||||.++..++..+|+ +|++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lv 73 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-----GIKKINLVGHSMGGMLALEYAAQYPE--RVKKLV 73 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-----TTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-----CCCCeEEEEECCChHHHHHHHHHCch--hhcCcE
Confidence 6899999999766443 3344566777778888888776 56779999999999999999999988 899999
Q ss_pred ccCCC
Q psy4317 161 GLDPA 165 (235)
Q Consensus 161 ~ldPa 165 (235)
++.+.
T Consensus 74 l~~~~ 78 (230)
T PF00561_consen 74 LISPP 78 (230)
T ss_dssp EESES
T ss_pred EEeee
Confidence 88775
No 65
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.04 E-value=5.8e-10 Score=92.12 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=66.9
Q ss_pred EEEEeC--CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEE
Q psy4317 56 VFYIHG--FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHV 133 (235)
Q Consensus 56 vi~iHG--~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~l 133 (235)
||++|| |...... +...+...+..+.++.|+++|||...+ ..|+.. ++++.+.+..+++...+.+++.++|+|
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~p~-~~~p~~---~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLAPE-APFPAA---LEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---TTT-SSTTHH---HHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeecccccc-cccccc---ccccccceeeeccccccccccccceEE
Confidence 789999 4433332 334455556553489999999998765 445433 233334444444443345788999999
Q ss_pred EEechhhHHHHHHHHhcCCCC--CCCcccccCCCC
Q psy4317 134 IGFSLGAEIAGFTGKALGTVD--KLPRITGLDPAF 166 (235)
Q Consensus 134 IGHSlGa~va~~~a~~~~~~g--~v~rI~~ldPa~ 166 (235)
+|+|.||++|..++....+.+ +++.++++.|..
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 999999999999888765431 578888887743
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.03 E-value=1.7e-09 Score=88.14 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=71.7
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcC-CeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRG-DFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~-~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
.|+++++||+.++... |.... ..+.... .++|+++|+++.+.+. .. .......+.++..+++.+ ..+++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~-~~~~~~~~~~~~~~~d~~g~g~s~--~~-~~~~~~~~~~~~~~~~~~-----~~~~~ 90 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVF-KVLPALAARYRVIAPDLRGHGRSD--PA-GYSLSAYADDLAALLDAL-----GLEKV 90 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHH-HHhhccccceEEEEecccCCCCCC--cc-cccHHHHHHHHHHHHHHh-----CCCce
Confidence 5599999999998874 54421 1222221 2899999999876643 00 112222255666666654 44569
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
+++|||+||.++..++...++ ++++++.+++...
T Consensus 91 ~l~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 91 VLVGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred EEEEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 999999999999999999887 7999999987654
No 67
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.02 E-value=1.1e-09 Score=97.92 Aligned_cols=107 Identities=10% Similarity=0.171 Sum_probs=71.3
Q ss_pred CcEEEEEeCCCCCCCCC---chHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHH-HHHHHHHHHHHhcCCCC
Q psy4317 53 MTTVFYIHGFTEQANGE---SGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVG-HFIAAFIRFLQSKGFPL 128 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~---~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~-~~l~~~l~~l~~~~~~~ 128 (235)
+++|+++||+..+.... ....+++.+.++ ||+|+++||++.+.+.. ..+..... .++.+.++.+.+. .+.
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~-G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~-~~~ 135 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLER-GQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRT-SKL 135 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHC-CCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHH-hCC
Confidence 55799999986443210 123556655554 79999999998644211 12233332 3466666666532 245
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
++++++||||||.++..++...++ +|.+++.+.|...
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~ 172 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVD 172 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCch--heeeEEEeccccc
Confidence 789999999999999988887766 7999999876543
No 68
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.00 E-value=3e-09 Score=89.90 Aligned_cols=111 Identities=15% Similarity=0.194 Sum_probs=67.2
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHH-------hcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYL-------RRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSK 124 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll-------~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~ 124 (235)
++.+||||||..|+... + +.+..... ....+.++.+|+........-..-..+.+.+.+.+..+++.+...
T Consensus 3 ~g~pVlFIhG~~Gs~~q-~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ-V-RSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCCEEEEECcCCCCHhH-H-HHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhc
Confidence 57789999998888653 2 23322221 112488999999874221100001123344444454444444223
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCC-CCCCcccccCC
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTV-DKLPRITGLDP 164 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~-g~v~rI~~ldP 164 (235)
..+.++|+||||||||.||..+....... .+|..|+.|..
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 35789999999999999998877654322 27888888853
No 69
>PLN02872 triacylglycerol lipase
Probab=98.99 E-value=7.4e-10 Score=100.98 Aligned_cols=113 Identities=15% Similarity=0.095 Sum_probs=76.4
Q ss_pred CCCcEEEEEeCCCCCCCCCch-----HHHHHHHHhcCCeEEEEEeCCCCCCC---Cchhh---h--hcchHHHH-HHHHH
Q psy4317 51 RQMTTVFYIHGFTEQANGESG-----TTVKDAYLRRGDFNIILVDWSGLSAF---PWYTN---A--ATNTHIVG-HFIAA 116 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~-----~~l~~~ll~~~~~nVi~vD~~~~~~~---~~y~~---~--~~~~~~v~-~~l~~ 116 (235)
..+|+|+|+||+.++... |. ..++.. |...||.|+++|+||...+ ..+.. . ..+....+ .++.+
T Consensus 72 ~~~~~Vll~HGl~~ss~~-w~~~~~~~sla~~-La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDA-WFLNSPEQSLGFI-LADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred CCCCeEEEeCcccccccc-eeecCcccchHHH-HHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHH
Confidence 347899999999877763 42 233333 3444799999999985321 01111 0 13456666 68999
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCC-CCCCcccccCCCCCC
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTV-DKLPRITGLDPAFPL 168 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~-g~v~rI~~ldPa~p~ 168 (235)
+++.+.+.. .+++++|||||||.++..++. .++. .+|..++++.|+...
T Consensus 150 ~id~i~~~~--~~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 150 MIHYVYSIT--NSKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred HHHHHHhcc--CCceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHHhcchhhh
Confidence 999876432 378999999999999875553 3432 278889999998754
No 70
>PRK10162 acetyl esterase; Provisional
Probab=98.99 E-value=3.5e-09 Score=93.82 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=70.8
Q ss_pred CCcEEEEEeC--CC-CCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCC
Q psy4317 52 QMTTVFYIHG--FT-EQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPL 128 (235)
Q Consensus 52 ~~p~vi~iHG--~~-~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~ 128 (235)
..|+||++|| |. ++.+ .|. .+...+....++.|+++||+.... ..|+... .++...+..+.+...+.+++.
T Consensus 80 ~~p~vv~~HGGg~~~g~~~-~~~-~~~~~la~~~g~~Vv~vdYrlape-~~~p~~~---~D~~~a~~~l~~~~~~~~~d~ 153 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLD-THD-RIMRLLASYSGCTVIGIDYTLSPE-ARFPQAI---EEIVAVCCYFHQHAEDYGINM 153 (318)
T ss_pred CCCEEEEEeCCcccCCCch-hhh-HHHHHHHHHcCCEEEEecCCCCCC-CCCCCcH---HHHHHHHHHHHHhHHHhCCCh
Confidence 4689999999 33 3333 233 344445554589999999998655 4455433 332222333333333557788
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCC----CCCCcccccCCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTV----DKLPRITGLDPAFP 167 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~----g~v~rI~~ldPa~p 167 (235)
++|.|+|||+||++|..++..+.+. .++..++++.|...
T Consensus 154 ~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 154 SRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 9999999999999999888765321 15777777766543
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=98.99 E-value=2.2e-09 Score=93.53 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=69.9
Q ss_pred CCCCcEEEEEeCCCCCCCCCchH--HHHHHHHhcCCeEEEEEeCCCCC-----CC---------Cchhhhh-------cc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGT--TVKDAYLRRGDFNIILVDWSGLS-----AF---------PWYTNAA-------TN 106 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~--~l~~~ll~~~~~nVi~vD~~~~~-----~~---------~~y~~~~-------~~ 106 (235)
....|+|+|+||+.++... |.. .+. .++...++.|+.+|....+ .. ..|.... ..
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~-~~~~~~~~-~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDEN-FIQKSGAQ-RAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRM 121 (283)
T ss_pred CCCCCEEEEecCCCcChHH-HHHhhhHH-HHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccch
Confidence 3468999999999988753 432 222 3445558999999976422 00 0111110 11
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 107 THIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 107 ~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
...+.+++.++++...+ .++.++++|+||||||++|..++...++ ++..++.+.|.
T Consensus 122 ~~~~~~~l~~~i~~~~~-~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~ 177 (283)
T PLN02442 122 YDYVVKELPKLLSDNFD-QLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVSAFAPI 177 (283)
T ss_pred hhhHHHHHHHHHHHHHH-hcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEEEECCc
Confidence 12233444444443321 2477899999999999999999988876 78877777665
No 72
>KOG2382|consensus
Probab=98.96 E-value=2.8e-09 Score=93.23 Aligned_cols=108 Identities=16% Similarity=0.179 Sum_probs=81.4
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
...|+++++||..|+... | ..+...+.+..+..|+++|.|.++.+. +. ...+-..++.++..||+..... ....+
T Consensus 50 ~~~Pp~i~lHGl~GS~~N-w-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp-~~-~~h~~~~ma~dv~~Fi~~v~~~-~~~~~ 124 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKEN-W-RSVAKNLSRKLGRDVYAVDVRNHGSSP-KI-TVHNYEAMAEDVKLFIDGVGGS-TRLDP 124 (315)
T ss_pred CCCCceEEecccccCCCC-H-HHHHHHhcccccCceEEEecccCCCCc-cc-cccCHHHHHHHHHHHHHHcccc-cccCC
Confidence 478999999999999963 4 577777777677899999999987743 22 2345677888888888875311 13568
Q ss_pred EEEEEechhh-HHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 131 MHVIGFSLGA-EIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 131 i~lIGHSlGa-~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+.|+|||||| .+++..+...+. .+.+++.+|-+
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~s 158 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKKPD--LIERLIVEDIS 158 (315)
T ss_pred ceecccCcchHHHHHHHHHhcCc--ccceeEEEecC
Confidence 9999999999 666666666666 79999988853
No 73
>PRK11460 putative hydrolase; Provisional
Probab=98.96 E-value=6.7e-09 Score=87.98 Aligned_cols=110 Identities=16% Similarity=0.208 Sum_probs=66.1
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCC------CCCchhh-------hhcchHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLS------AFPWYTN-------AATNTHIVGHFIAA 116 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~------~~~~y~~-------~~~~~~~v~~~l~~ 116 (235)
.+.+|+||++||++++... | ..+.+.+... ..++.+++.++.. ....|.. ....+......+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~-~-~~l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVA-M-GEIGSWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCcEEEEEeCCCCChHH-H-HHHHHHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 5568899999999999874 4 3455544333 3334444444311 0011110 01112233334445
Q ss_pred HHHHHH-hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCC
Q psy4317 117 FIRFLQ-SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 117 ~l~~l~-~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldP 164 (235)
+++.+. +.+++.++|+|+|||+||.++..++...++ .++.++++.+
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg 136 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSG 136 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEecc
Confidence 555554 456778899999999999999988877665 6777776644
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.95 E-value=5.7e-09 Score=87.11 Aligned_cols=106 Identities=16% Similarity=0.146 Sum_probs=77.6
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEE
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHV 133 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~l 133 (235)
++||++|+..|+.. .+..+++.+-.. .+.|+.+++++..... ....+++.++....+.|... .+...++|
T Consensus 1 ~~lf~~p~~gG~~~--~y~~la~~l~~~-~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~----~~~gp~~L 70 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS--SYRPLARALPDD-VIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRAR----QPEGPYVL 70 (229)
T ss_dssp -EEEEESSTTCSGG--GGHHHHHHHTTT-EEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHH----TSSSSEEE
T ss_pred CeEEEEcCCccCHH--HHHHHHHhCCCC-eEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhh----CCCCCeee
Confidence 47999999999765 456777654321 3999999999865322 22356677776666666554 12338999
Q ss_pred EEechhhHHHHHHHHhcCCCC-CCCcccccCCCCCCC
Q psy4317 134 IGFSLGAEIAGFTGKALGTVD-KLPRITGLDPAFPLY 169 (235)
Q Consensus 134 IGHSlGa~va~~~a~~~~~~g-~v~rI~~ldPa~p~f 169 (235)
+|||+||.||..+|+.+.+.| ++.+|+++|...|..
T Consensus 71 ~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~ 107 (229)
T PF00975_consen 71 AGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSI 107 (229)
T ss_dssp EEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTC
T ss_pred hccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCc
Confidence 999999999999999986656 799999999766654
No 75
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.94 E-value=1e-08 Score=85.73 Aligned_cols=140 Identities=15% Similarity=0.160 Sum_probs=79.2
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCC------CCCC--Cchh---------hhhcchHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSG------LSAF--PWYT---------NAATNTHIVGH 112 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~------~~~~--~~y~---------~~~~~~~~v~~ 112 (235)
.+.+++||++||++++.. .+..+........+..+|++.-+. .+.. ..|. .....+....+
T Consensus 11 ~~~~~lvi~LHG~G~~~~--~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSED--LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--TTS-HH--HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcc--hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 678899999999998873 233333312233468888876542 1110 1111 01233455556
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCCCCCCCCCCCccCCCeeEEEeeC
Q psy4317 113 FIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYGFTGGEGHLSKEDADFVDVIHTD 192 (235)
Q Consensus 113 ~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~~~~~~~~l~~~dA~~v~viht~ 192 (235)
.|.++|+.+.+.+++.++|+|.|||.||.+|..++...+. +++.++++....|.... ............+=.+|-.
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~--~~~~~~~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESE--LEDRPEALAKTPILIIHGD 164 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCC--CHCCHCCCCTS-EEEEEET
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeecccccccc--ccccccccCCCcEEEEecC
Confidence 6777777766777899999999999999999999999887 89999999766554332 1111112224566677776
Q ss_pred CCC
Q psy4317 193 GGI 195 (235)
Q Consensus 193 ~~~ 195 (235)
.+.
T Consensus 165 ~D~ 167 (216)
T PF02230_consen 165 EDP 167 (216)
T ss_dssp T-S
T ss_pred CCC
Confidence 543
No 76
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.90 E-value=5.4e-09 Score=87.91 Aligned_cols=92 Identities=20% Similarity=0.239 Sum_probs=54.0
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhcCCeE---EEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRRGDFN---IILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~n---Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
.+||||||..++....|. .+++.|.++ ||. |++++|................+. ++.|+++|+.+.+.. .. +
T Consensus 2 ~PVVlVHG~~~~~~~~w~-~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~-~~~l~~fI~~Vl~~T-Ga-k 76 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS-TLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCES-AKQLRAFIDAVLAYT-GA-K 76 (219)
T ss_dssp --EEEE--TTTTTCGGCC-HHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHH-HHHHHHHHHHHHHHH-T---
T ss_pred CCEEEECCCCcchhhCHH-HHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhh-HHHHHHHHHHHHHhh-CC-E
Confidence 469999999987766665 555655555 798 899999765431211112213333 367888888876332 24 9
Q ss_pred EEEEEechhhHHHHHHHHhc
Q psy4317 131 MHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~ 150 (235)
|.|||||||+.++.++.+..
T Consensus 77 VDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 77 VDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEEETCHHHHHHHHHHHC
T ss_pred EEEEEcCCcCHHHHHHHHHc
Confidence 99999999999999887754
No 77
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.87 E-value=2.5e-08 Score=85.90 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=80.0
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
...|||=+||-.||++. ++.+.+.|-+ .+.++|.++|||.+.+..|+....+-..-...+..+++.| +++ +++
T Consensus 34 ~~gTVv~~hGsPGSH~D--FkYi~~~l~~-~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l---~i~-~~~ 106 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHND--FKYIRPPLDE-AGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDEL---GIK-GKL 106 (297)
T ss_pred CceeEEEecCCCCCccc--hhhhhhHHHH-cCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHc---CCC-Cce
Confidence 34589999999999984 6777765544 4899999999998766666544433344345566666665 554 789
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYG 170 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~ 170 (235)
.++|||.|+-.|..++...+ +..+++++|.|-...
T Consensus 107 i~~gHSrGcenal~la~~~~----~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 107 IFLGHSRGCENALQLAVTHP----LHGLVLINPPGLRPH 141 (297)
T ss_pred EEEEeccchHHHHHHHhcCc----cceEEEecCCccccc
Confidence 99999999999999998874 457888988765433
No 78
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.86 E-value=1.9e-08 Score=101.49 Aligned_cols=107 Identities=12% Similarity=0.098 Sum_probs=66.1
Q ss_pred CCcEEEEEeCCCCCCCCCchHH----HHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 52 QMTTVFYIHGFTEQANGESGTT----VKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~----l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
.+++|||+|||..+.. .|... +.+.+.+ .+|+|+++||........+. ..+.......+.+.++.+.+.+
T Consensus 66 ~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~-~g~~v~~~d~G~~~~~~~~~--~~~l~~~i~~l~~~l~~v~~~~-- 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHR-AGLDPWVIDFGSPDKVEGGM--ERNLADHVVALSEAIDTVKDVT-- 139 (994)
T ss_pred CCCcEEEECCCCCCcc-ceecCCcccHHHHHHH-CCCEEEEEcCCCCChhHcCc--cCCHHHHHHHHHHHHHHHHHhh--
Confidence 5689999999988876 35422 3444444 47999999995322111110 1222222234444554433222
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
.+++++|||||||.++..++...++. +|++++.+++.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~~~ 176 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFGSP 176 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEecc
Confidence 36899999999999998777644433 79999886543
No 79
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.86 E-value=1.1e-08 Score=97.11 Aligned_cols=112 Identities=11% Similarity=0.093 Sum_probs=77.2
Q ss_pred CCcEEEEEeCCCCCCCC--CchHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhhhhcchHHHHHHHHHHHHHHHhcCCCC
Q psy4317 52 QMTTVFYIHGFTEQANG--ESGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTNAATNTHIVGHFIAAFIRFLQSKGFPL 128 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~--~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~ 128 (235)
..|+||++|||..+... .+.......++++ ||.|+++|.+|.+.+. .+.. .. ...++++.++++++.+.....
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~-Gy~vv~~D~RG~g~S~g~~~~--~~-~~~~~D~~~~i~~l~~q~~~~ 96 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQ-GYAVVIQDTRGRGASEGEFDL--LG-SDEAADGYDLVDWIAKQPWCD 96 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhC-CcEEEEEeccccccCCCceEe--cC-cccchHHHHHHHHHHhCCCCC
Confidence 57899999999976431 1222223334444 8999999999965432 2211 11 345567888888887544344
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLY 169 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f 169 (235)
.+|.++|||+||.++..+|...++ +++.|+...+....+
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLY 135 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchh
Confidence 699999999999999999888665 788888777665544
No 80
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.83 E-value=2.2e-08 Score=97.50 Aligned_cols=95 Identities=18% Similarity=0.125 Sum_probs=67.5
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCc----------------hh------hhhcchHH
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPW----------------YT------NAATNTHI 109 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~----------------y~------~~~~~~~~ 109 (235)
+.|+|||+||+.++... | ..+...+..+ +|+|+++|+++++.+.. |. .+..++++
T Consensus 448 g~P~VVllHG~~g~~~~-~-~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ 524 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-A-LAFAGTLAAA-GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQ 524 (792)
T ss_pred CCcEEEEeCCCCCCHHH-H-HHHHHHHHhC-CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHH
Confidence 45799999999998763 4 4555555444 79999999998765311 11 11236777
Q ss_pred HHHHHHHHHHHHH------hc-----CCCCccEEEEEechhhHHHHHHHHh
Q psy4317 110 VGHFIAAFIRFLQ------SK-----GFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 110 v~~~l~~~l~~l~------~~-----~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
...++..+...+. +. .++..+++++||||||.++..++..
T Consensus 525 ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 525 SILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 7778877777775 11 1456799999999999999876654
No 81
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.82 E-value=3e-08 Score=87.23 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=74.0
Q ss_pred CCCCcEEEEEeC--CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 50 NRQMTTVFYIHG--FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 50 ~~~~p~vi~iHG--~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
..+.|+||++|| |....... ...+...++...++.|+++||+...+ ..|+... .++.+.+..+.++..+.+.+
T Consensus 76 ~~~~p~vly~HGGg~~~g~~~~-~~~~~~~~~~~~g~~vv~vdYrlaPe-~~~p~~~---~d~~~a~~~l~~~~~~~g~d 150 (312)
T COG0657 76 AATAPVVLYLHGGGWVLGSLRT-HDALVARLAAAAGAVVVSVDYRLAPE-HPFPAAL---EDAYAAYRWLRANAAELGID 150 (312)
T ss_pred CCCCcEEEEEeCCeeeecChhh-hHHHHHHHHHHcCCEEEecCCCCCCC-CCCCchH---HHHHHHHHHHHhhhHhhCCC
Confidence 446899999999 44443322 22334445555689999999999776 4566443 33333444444444456889
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCC--CCCcccccCCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVD--KLPRITGLDPA 165 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g--~v~rI~~ldPa 165 (235)
+++|.|.|+|.||++|..++....+.+ .....+++-|.
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 999999999999999999888765421 34444555444
No 82
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.81 E-value=7.3e-08 Score=90.82 Aligned_cols=105 Identities=7% Similarity=0.139 Sum_probs=66.0
Q ss_pred CCcEEEEEeCCCCCCCCCch----HHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcch-HHHHHHHHHHHHHHHhcCC
Q psy4317 52 QMTTVFYIHGFTEQANGESG----TTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNT-HIVGHFIAAFIRFLQSKGF 126 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~----~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~-~~v~~~l~~~l~~l~~~~~ 126 (235)
.+++|+|||||..... .+. ..+++.++++ ||+|+++||++.+.+.... .. ..+.+.+.+.++.+.+. .
T Consensus 187 ~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~----~~ddY~~~~i~~al~~v~~~-~ 259 (532)
T TIGR01838 187 HKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADK----TFDDYIRDGVIAALEVVEAI-T 259 (532)
T ss_pred CCCcEEEECcccccce-eeecccchHHHHHHHHC-CcEEEEEECCCCCcccccC----ChhhhHHHHHHHHHHHHHHh-c
Confidence 5688999999975543 221 3466655554 7999999999965422110 11 22223455555554421 2
Q ss_pred CCccEEEEEechhhHHHHH----HHHhc-CCCCCCCcccccCCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGF----TGKAL-GTVDKLPRITGLDPA 165 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~----~a~~~-~~~g~v~rI~~ldPa 165 (235)
+.+++++|||||||.++.. ++... ++ +|+++|.+...
T Consensus 260 g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~ 301 (532)
T TIGR01838 260 GEKQVNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTL 301 (532)
T ss_pred CCCCeEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecC
Confidence 5689999999999998632 23332 33 79999988654
No 83
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.80 E-value=2.8e-08 Score=80.58 Aligned_cols=90 Identities=16% Similarity=0.156 Sum_probs=59.4
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhc-CCCCccEEEE
Q psy4317 56 VFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSK-GFPLHKMHVI 134 (235)
Q Consensus 56 vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~-~~~~~~i~lI 134 (235)
|++||||.++....|+..+.+.+-.. ++|-..||. .. ++.+++..|.+. ....++++||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~--~~V~~~~~~----~P--------------~~~~W~~~l~~~i~~~~~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS--VRVEQPDWD----NP--------------DLDEWVQALDQAIDAIDEPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS--EEEEEC--T----S----------------HHHHHHHHHHCCHC-TTTEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC--eEEeccccC----CC--------------CHHHHHHHHHHHHhhcCCCeEEE
Confidence 68999999999989999998766432 788877771 11 234455555522 1224569999
Q ss_pred EechhhHHHHHHH-HhcCCCCCCCcccccCCCCC
Q psy4317 135 GFSLGAEIAGFTG-KALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 135 GHSlGa~va~~~a-~~~~~~g~v~rI~~ldPa~p 167 (235)
|||||+..+..++ ..... +|++++++.|..+
T Consensus 61 aHSLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQK--KVAGALLVAPFDP 92 (171)
T ss_dssp EETHHHHHHHHHHHHTCCS--SEEEEEEES--SC
T ss_pred EeCHHHHHHHHHHhhcccc--cccEEEEEcCCCc
Confidence 9999999998777 44333 8999999988765
No 84
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.76 E-value=2.1e-08 Score=91.31 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=75.4
Q ss_pred CCcEEEEEeCCCCCCC-----------CCchHHHHHH--HHhcCCeEEEEEeCCCCCCC--C----------------ch
Q psy4317 52 QMTTVFYIHGFTEQAN-----------GESGTTVKDA--YLRRGDFNIILVDWSGLSAF--P----------------WY 100 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~-----------~~~~~~l~~~--ll~~~~~nVi~vD~~~~~~~--~----------------~y 100 (235)
..+.|++.|+++++.. ..|+..++-. .++-..|.||++|.-|...+ + .|
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 3578999999999642 2366555431 23333599999999874210 0 01
Q ss_pred h--hhhcchHHHHHHHHHHHHHHHhcCCCCccEE-EEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 101 T--NAATNTHIVGHFIAAFIRFLQSKGFPLHKMH-VIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 101 ~--~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~-lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
. -...+++++++++.++++.| ..++++ +|||||||++|..++..+|+ +|++++.+..+
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~l-----gi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~~ 195 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSL-----GIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIGN 195 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHc-----CCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEecC
Confidence 1 11246777777777777765 568887 99999999999999999988 89999988654
No 85
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.75 E-value=3.7e-08 Score=84.49 Aligned_cols=110 Identities=17% Similarity=0.243 Sum_probs=73.3
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhc-----
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSK----- 124 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~----- 124 (235)
..+-|++||+||+. ... .|+..+...+... ||-|+.+|+..... ......++..++.+.++.+.|...
T Consensus 14 ~g~yPVv~f~~G~~-~~~-s~Ys~ll~hvASh-GyIVV~~d~~~~~~----~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v 86 (259)
T PF12740_consen 14 AGTYPVVLFLHGFL-LIN-SWYSQLLEHVASH-GYIVVAPDLYSIGG----PDDTDEVASAAEVIDWLAKGLESKLPLGV 86 (259)
T ss_pred CCCcCEEEEeCCcC-CCH-HHHHHHHHHHHhC-ceEEEEecccccCC----CCcchhHHHHHHHHHHHHhcchhhccccc
Confidence 45689999999999 333 3677777776665 79999999655222 111122333333333333333321
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCC--C-CCCcccccCCCC
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTV--D-KLPRITGLDPAF 166 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~--g-~v~rI~~ldPa~ 166 (235)
..|.+++.|.|||-||.+|..++....+. . +++.+++|||..
T Consensus 87 ~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 87 KPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 24788999999999999998777765221 1 899999999986
No 86
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.73 E-value=9.2e-08 Score=81.51 Aligned_cols=118 Identities=14% Similarity=0.168 Sum_probs=75.9
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcC--
Q psy4317 48 HMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKG-- 125 (235)
Q Consensus 48 ~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~-- 125 (235)
.-...-|.|+|+|||.-..+ |+.++...+... ||-|+++++........+ ........+++.+.+-++.+...+
T Consensus 41 ~~~G~yPVilF~HG~~l~ns--~Ys~lL~HIASH-GfIVVAPQl~~~~~p~~~-~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 41 SEAGTYPVILFLHGFNLYNS--FYSQLLAHIASH-GFIVVAPQLYTLFPPDGQ-DEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred CcCCCccEEEEeechhhhhH--HHHHHHHHHhhc-CeEEEechhhcccCCCch-HHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 33667889999999986643 666776655554 799999998764321111 111222222222222222222122
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcC-CCCCCCcccccCCCCCCCC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALG-TVDKLPRITGLDPAFPLYG 170 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~-~~g~v~rI~~ldPa~p~f~ 170 (235)
.+++++.++|||.||..|-.+|..+. +. ++..++++||....-+
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a~~l-kfsaLIGiDPV~G~~k 161 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYATSL-KFSALIGIDPVAGTSK 161 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhcccccC-chhheecccccCCCCC
Confidence 47789999999999999987777653 33 8999999999866544
No 87
>KOG1838|consensus
Probab=98.71 E-value=9.2e-08 Score=86.46 Aligned_cols=93 Identities=16% Similarity=0.297 Sum_probs=68.0
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC---chhhhhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP---WYTNAATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~---~y~~~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
.+.|+||++||.++++.+.+.+.++....++ ||+|++++-||.+... .-...+..+ .||.++++++.+ .++
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~-G~r~VVfN~RG~~g~~LtTpr~f~ag~t----~Dl~~~v~~i~~-~~P 196 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRK-GYRVVVFNHRGLGGSKLTTPRLFTAGWT----EDLREVVNHIKK-RYP 196 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhC-CcEEEEECCCCCCCCccCCCceeecCCH----HHHHHHHHHHHH-hCC
Confidence 5679999999999999888888888765555 7999999999954321 000112333 467777877753 357
Q ss_pred CccEEEEEechhhHHHH-HHHHh
Q psy4317 128 LHKMHVIGFSLGAEIAG-FTGKA 149 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~-~~a~~ 149 (235)
..++..||+||||.|.. ++|..
T Consensus 197 ~a~l~avG~S~Gg~iL~nYLGE~ 219 (409)
T KOG1838|consen 197 QAPLFAVGFSMGGNILTNYLGEE 219 (409)
T ss_pred CCceEEEEecchHHHHHHHhhhc
Confidence 78999999999998876 55555
No 88
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.70 E-value=1.2e-07 Score=84.10 Aligned_cols=114 Identities=14% Similarity=0.272 Sum_probs=80.4
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchH--HHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCC
Q psy4317 49 MNRQMTTVFYIHGFTEQANGESGT--TVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGF 126 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~~~~~~--~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~ 126 (235)
|...+..++|+|||..+-...-.+ +|... +.. ....|++-|+..++...|.........-..+|+.+|+.|.+..
T Consensus 112 ~s~~k~vlvFvHGfNntf~dav~R~aqI~~d-~g~-~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~- 188 (377)
T COG4782 112 FSSAKTVLVFVHGFNNTFEDAVYRTAQIVHD-SGN-DGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK- 188 (377)
T ss_pred ccCCCeEEEEEcccCCchhHHHHHHHHHHhh-cCC-CcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC-
Confidence 346788999999999876643222 22221 222 4778999999977756676666667777788999999887433
Q ss_pred CCccEEEEEechhhHHHHHHHHhcCCC------CCCCcccccCCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALGTV------DKLPRITGLDPA 165 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~~~------g~v~rI~~ldPa 165 (235)
+.++|+|++||||..++..+-+++.-. .+++.+++-.|.
T Consensus 189 ~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 189 PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 468999999999999998877765321 156666665454
No 89
>KOG4627|consensus
Probab=98.68 E-value=9.1e-08 Score=78.87 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=64.3
Q ss_pred CCCCcEEEEEeC--CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 50 NRQMTTVFYIHG--FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 50 ~~~~p~vi~iHG--~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
....|..||||| |.....+. --.++...+++ +|+|.+++|.-..+.. ...+.-.+....++++.++.-+
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~-clsiv~~a~~~-gY~vasvgY~l~~q~h-------tL~qt~~~~~~gv~filk~~~n 134 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKM-CLSIVGPAVRR-GYRVASVGYNLCPQVH-------TLEQTMTQFTHGVNFILKYTEN 134 (270)
T ss_pred CCCccEEEEEecchhhcCchhc-ccchhhhhhhc-CeEEEEeccCcCcccc-------cHHHHHHHHHHHHHHHHHhccc
Confidence 456789999999 44333322 22334444454 7999999987655421 1222222333445554444445
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCCCCCccccc
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGL 162 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~l 162 (235)
.+++.+-|||.|||+|..+-.+..+. +|..++++
T Consensus 135 ~k~l~~gGHSaGAHLa~qav~R~r~p-rI~gl~l~ 168 (270)
T KOG4627|consen 135 TKVLTFGGHSAGAHLAAQAVMRQRSP-RIWGLILL 168 (270)
T ss_pred ceeEEEcccchHHHHHHHHHHHhcCc-hHHHHHHH
Confidence 67899999999999998776665443 77776655
No 90
>KOG1515|consensus
Probab=98.67 E-value=3.9e-07 Score=81.26 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=80.7
Q ss_pred CCCcEEEEEeC--CC-CCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHH-HHhcCC
Q psy4317 51 RQMTTVFYIHG--FT-EQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRF-LQSKGF 126 (235)
Q Consensus 51 ~~~p~vi~iHG--~~-~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~-l~~~~~ 126 (235)
...|.+||+|| |. ++.....+..+...+..+.+..|++||||...+ ..++.+. ++.-..+..+.++ +.+.+.
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE-h~~Pa~y---~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE-HPFPAAY---DDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC-CCCCccc---hHHHHHHHHHHHhHHHHhCC
Confidence 67899999999 32 222222233333344455589999999999877 4565433 3333456666665 667789
Q ss_pred CCccEEEEEechhhHHHHHHHHhcCCC----CCCCcccccCCCCCCCCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALGTV----DKLPRITGLDPAFPLYGF 171 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~~~----g~v~rI~~ldPa~p~f~~ 171 (235)
|.++|.|.|-|.||.||..+|.+..+. .+|..++++=|..-..+.
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 999999999999999999888876421 278888888776544443
No 91
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.59 E-value=3.1e-07 Score=75.52 Aligned_cols=89 Identities=24% Similarity=0.381 Sum_probs=55.2
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHhc--CCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEE
Q psy4317 56 VFYIHGFTEQANGESGTTVKDAYLRR--GDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHV 133 (235)
Q Consensus 56 vi~iHG~~~s~~~~~~~~l~~~ll~~--~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~l 133 (235)
++++|||.++..+.-...+. +++.. .+.+++.+|++... ......+.++++.. ..+++.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~-~~~~~~~~~~~~~~p~l~~~p------------~~a~~~l~~~i~~~-----~~~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALK-QYFAEHGPDIQYPCPDLPPFP------------EEAIAQLEQLIEEL-----KPENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHH-HHHHHhCCCceEECCCCCcCH------------HHHHHHHHHHHHhC-----CCCCeEE
Confidence 78999999998764333343 34432 13455655544221 11112333444332 3456999
Q ss_pred EEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 134 IGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 134 IGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
||.||||..|.++|.+++ ++. ++++||..
T Consensus 64 iGSSlGG~~A~~La~~~~----~~a-vLiNPav~ 92 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG----LPA-VLINPAVR 92 (187)
T ss_pred EEEChHHHHHHHHHHHhC----CCE-EEEcCCCC
Confidence 999999999999999874 444 68888843
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=98.58 E-value=4.3e-07 Score=75.79 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=73.2
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCC----CCCC-CchhhhhcchHHHH---HHHHHHHH
Q psy4317 48 HMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSG----LSAF-PWYTNAATNTHIVG---HFIAAFIR 119 (235)
Q Consensus 48 ~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~----~~~~-~~y~~~~~~~~~v~---~~l~~~l~ 119 (235)
.-++..|+||++||++++... +.. +.. ++ ..+..++.+--+- .... ..|.....+.+.+. ..++++++
T Consensus 13 ~~~p~~~~iilLHG~Ggde~~-~~~-~~~-~~-~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 13 PGDPAAPLLILLHGLGGDELD-LVP-LPE-LI-LPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCCCCcEEEEEecCCCChhh-hhh-hhh-hc-CCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 346788899999999988764 333 222 22 2356666653221 1110 11111222233333 33444444
Q ss_pred HHH-hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 120 FLQ-SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 120 ~l~-~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
.+. +++++.+++.++|||-||.|+..+....+. .+++++++-|..|.
T Consensus 89 ~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~ 136 (207)
T COG0400 89 ELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPL 136 (207)
T ss_pred HHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCC
Confidence 443 678899999999999999999999999876 79999988776655
No 93
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.54 E-value=5.5e-07 Score=75.04 Aligned_cols=108 Identities=15% Similarity=0.146 Sum_probs=72.8
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCC--CCchhhhhc--------chHHHHHHHHHHHHH
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSA--FPWYTNAAT--------NTHIVGHFIAAFIRF 120 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~--~~~y~~~~~--------~~~~v~~~l~~~l~~ 120 (235)
.++|.||++|++.|-. .+.+.+++.+..+ ||.|+++|+-.+.. ...+..... ..+.+..++...++.
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~ 88 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDY 88 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 4678999999988866 3667788877665 79999999866433 112221111 123556677777888
Q ss_pred HHhcC-CCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCC
Q psy4317 121 LQSKG-FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 121 l~~~~-~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldP 164 (235)
|.+.. .+.++|-+||+|+||.+|..++... . ++...+..=|
T Consensus 89 l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~--~~~a~v~~yg 130 (218)
T PF01738_consen 89 LRAQPEVDPGKIGVVGFCWGGKLALLLAARD-P--RVDAAVSFYG 130 (218)
T ss_dssp HHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-T--TSSEEEEES-
T ss_pred HHhccccCCCcEEEEEEecchHHhhhhhhhc-c--ccceEEEEcC
Confidence 87443 6778999999999999999988875 3 5777766656
No 94
>KOG4667|consensus
Probab=98.53 E-value=6e-07 Score=74.56 Aligned_cols=97 Identities=16% Similarity=0.243 Sum_probs=70.5
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC--chhhhhcchHHHHHHHHHHHHHHHhcCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP--WYTNAATNTHIVGHFIAAFIRFLQSKGFP 127 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--~y~~~~~~~~~v~~~l~~~l~~l~~~~~~ 127 (235)
-.+.++++++|||.++.+......++.++ .+.++-++.+|++|.+++. .|+ .+.+..|++|..+++.+....
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~-e~~gis~fRfDF~GnGeS~gsf~~---Gn~~~eadDL~sV~q~~s~~n-- 103 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKAL-EKEGISAFRFDFSGNGESEGSFYY---GNYNTEADDLHSVIQYFSNSN-- 103 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHH-HhcCceEEEEEecCCCCcCCcccc---CcccchHHHHHHHHHHhccCc--
Confidence 34677899999999999876666776654 4558999999999965532 222 334455688999998875311
Q ss_pred CccEEEEEechhhHHHHHHHHhcCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
..=-.++|||-|+-|+...+..+.+
T Consensus 104 r~v~vi~gHSkGg~Vvl~ya~K~~d 128 (269)
T KOG4667|consen 104 RVVPVILGHSKGGDVVLLYASKYHD 128 (269)
T ss_pred eEEEEEEeecCccHHHHHHHHhhcC
Confidence 1112689999999999988887764
No 95
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.52 E-value=6e-07 Score=77.74 Aligned_cols=121 Identities=21% Similarity=0.159 Sum_probs=79.8
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhc--CCeEEEEEeCCCCCCCCch-----hhhhcchHHHHHHHHHHHHHHHh-c
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRR--GDFNIILVDWSGLSAFPWY-----TNAATNTHIVGHFIAAFIRFLQS-K 124 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~--~~~nVi~vD~~~~~~~~~y-----~~~~~~~~~v~~~l~~~l~~l~~-~ 124 (235)
++.++||.|=.|-.. ++..+.+.+.++ ..+.|+++...|......- .....+.+..-+--.++++.+.. .
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 567899999888765 555555555443 5799999999997542221 11223444333333344544432 2
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCC-CCCCcccccCCCCCCCCCCCCC
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTV-DKLPRITGLDPAFPLYGFTGGE 175 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~-g~v~rI~~ldPa~p~f~~~~~~ 175 (235)
..+..+++|||||+||.|+..+.++++.. .+|.++++|=|.-.-...++..
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G 131 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNG 131 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchh
Confidence 12567899999999999999999998821 2899999998876655544433
No 96
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.50 E-value=5.6e-07 Score=74.58 Aligned_cols=87 Identities=11% Similarity=0.174 Sum_probs=58.6
Q ss_pred HHHhcCCeEEEEEeCCCCCCCC-chhhh-hcch-HHHHHHHHHHHHHHHh-cCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 77 AYLRRGDFNIILVDWSGLSAFP-WYTNA-ATNT-HIVGHFIAAFIRFLQS-KGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 77 ~ll~~~~~nVi~vD~~~~~~~~-~y~~~-~~~~-~~v~~~l~~~l~~l~~-~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
.++...||.|+.+|+|+.+... .+... ..+. ....+++.+.++.|.+ ..+++++|.|+|||+||+++..++.+.++
T Consensus 8 ~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~ 87 (213)
T PF00326_consen 8 QLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPD 87 (213)
T ss_dssp HHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCC
T ss_pred HHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccce
Confidence 4564558999999999965421 12111 1111 2334667778888874 34789999999999999999999987676
Q ss_pred CCCCCcccccCCC
Q psy4317 153 VDKLPRITGLDPA 165 (235)
Q Consensus 153 ~g~v~rI~~ldPa 165 (235)
+++.++...|.
T Consensus 88 --~f~a~v~~~g~ 98 (213)
T PF00326_consen 88 --RFKAAVAGAGV 98 (213)
T ss_dssp --GSSEEEEESE-
T ss_pred --eeeeeecccee
Confidence 67777766554
No 97
>KOG1552|consensus
Probab=98.49 E-value=1.4e-06 Score=74.06 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=68.4
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCCCCcc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGFPLHK 130 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~~~~~ 130 (235)
..+++++.||-...... ...+...+-.+-+.||+.+||+|.+.+..=+ +..++ -+++..+.+.|. ..| +.++
T Consensus 59 ~~~~lly~hGNa~Dlgq--~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p-sE~n~---y~Di~avye~Lr~~~g-~~~~ 131 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQ--MVELFKELSIFLNCNVVSYDYSGYGRSSGKP-SERNL---YADIKAVYEWLRNRYG-SPER 131 (258)
T ss_pred cceEEEEcCCcccchHH--HHHHHHHHhhcccceEEEEecccccccCCCc-ccccc---hhhHHHHHHHHHhhcC-CCce
Confidence 46899999998555441 1122222333347999999999966533211 12222 246777777777 566 7899
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
|.|.|+|||+..+..+|.+.+ +..+++..|-
T Consensus 132 Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf 162 (258)
T KOG1552|consen 132 IILYGQSIGTVPTVDLASRYP----LAAVVLHSPF 162 (258)
T ss_pred EEEEEecCCchhhhhHhhcCC----cceEEEeccc
Confidence 999999999999888888864 4555555443
No 98
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.45 E-value=1.4e-06 Score=74.95 Aligned_cols=113 Identities=18% Similarity=0.338 Sum_probs=65.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHH-hcCC---eEEEEEeCCCC----C---CCCc-------hhhhh-cchHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYL-RRGD---FNIILVDWSGL----S---AFPW-------YTNAA-TNTHIV 110 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll-~~~~---~nVi~vD~~~~----~---~~~~-------y~~~~-~~~~~v 110 (235)
.....+.||||||.++..+ +..|++.+. +.+. .-++-|+-.|. + .... |.... .+....
T Consensus 8 ~~~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~q 85 (255)
T PF06028_consen 8 NQSTTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQ 85 (255)
T ss_dssp --S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHH
T ss_pred ccCCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHH
Confidence 3455678899999999875 456777665 3321 22344444331 0 0001 11122 345667
Q ss_pred HHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCC---CCCcccccCCC
Q psy4317 111 GHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVD---KLPRITGLDPA 165 (235)
Q Consensus 111 ~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g---~v~rI~~ldPa 165 (235)
++.|..++..|.+. +..+++.+|||||||.++..+........ +|.+++.|+..
T Consensus 86 a~wl~~vl~~L~~~-Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 86 AKWLKKVLKYLKKK-YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp HHHHHHHHHHHHHC-C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred HHHHHHHHHHHHHh-cCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 77888888888743 35789999999999999987666543221 67888888543
No 99
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.44 E-value=4.9e-07 Score=75.94 Aligned_cols=93 Identities=19% Similarity=0.239 Sum_probs=52.6
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHh---c-CCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCC
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLR---R-GDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGF 126 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~---~-~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~ 126 (235)
..-.|||+||+.|+... | ..+.+.+.. . .+-+++..-.... .......++..++.+++-|.... +...
T Consensus 3 ~~hLvV~vHGL~G~~~d-~-~~~~~~l~~~~~~~~~~~i~~~~~~~n-----~~~T~~gI~~~g~rL~~eI~~~~~~~~~ 75 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPAD-M-RYLKNHLEKIPEDLPNARIVVLGYSNN-----EFKTFDGIDVCGERLAEEILEHIKDYES 75 (217)
T ss_pred CCEEEEEeCCCCCCHHH-H-HHHHHHHHHhhhhcchhhhhhhccccc-----ccccchhhHHHHHHHHHHHHHhcccccc
Confidence 45589999999999653 3 445444433 1 1122222222111 11122345666666655554333 2222
Q ss_pred CCccEEEEEechhhHHHHHHHHhcC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
...+|.+|||||||.|+-++.....
T Consensus 76 ~~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 76 KIRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred ccccceEEEecccHHHHHHHHHHhh
Confidence 3468999999999999987766543
No 100
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.43 E-value=9.7e-07 Score=80.20 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=60.1
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchh-----------------h--------h--
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYT-----------------N--------A-- 103 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~-----------------~--------~-- 103 (235)
..-|+|||-||+.++.+. +..+..++..+ ||-|+++|.+.++....|. . .
T Consensus 98 ~~~PvvIFSHGlgg~R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE--TT--TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCCCCcchhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 567899999999999884 45666677776 7999999999764211110 0 0
Q ss_pred ----h---cchHHHHHHHHHHHHHHHh--c-------------------CCCCccEEEEEechhhHHHHHHHHhcCCCCC
Q psy4317 104 ----A---TNTHIVGHFIAAFIRFLQS--K-------------------GFPLHKMHVIGFSLGAEIAGFTGKALGTVDK 155 (235)
Q Consensus 104 ----~---~~~~~v~~~l~~~l~~l~~--~-------------------~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~ 155 (235)
. ..++.=..++.++++.|.+ . .++.++|.++|||+||..+..++..- . +
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~--r 251 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-T--R 251 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--T--T
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-c--C
Confidence 0 0011112234444444431 1 14578999999999999999887774 3 7
Q ss_pred CCcccccCCCC
Q psy4317 156 LPRITGLDPAF 166 (235)
Q Consensus 156 v~rI~~ldPa~ 166 (235)
++..++|||..
T Consensus 252 ~~~~I~LD~W~ 262 (379)
T PF03403_consen 252 FKAGILLDPWM 262 (379)
T ss_dssp --EEEEES---
T ss_pred cceEEEeCCcc
Confidence 88999999975
No 101
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.38 E-value=1.2e-06 Score=73.79 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=67.2
Q ss_pred CCcEEEEEeCCCCCCCCCchH--HHHHHHHhcCCeEEEEEeCCCCCC-CCch--hh-hhcchHHHHHHHHHHHHHHH-hc
Q psy4317 52 QMTTVFYIHGFTEQANGESGT--TVKDAYLRRGDFNIILVDWSGLSA-FPWY--TN-AATNTHIVGHFIAAFIRFLQ-SK 124 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~--~l~~~ll~~~~~nVi~vD~~~~~~-~~~y--~~-~~~~~~~v~~~l~~~l~~l~-~~ 124 (235)
..|+||++||..++... +.. .+ +.+.++.+|-|+.++...... ...+ .. ....-..-...|+++++.+. +.
T Consensus 15 ~~PLVv~LHG~~~~a~~-~~~~s~~-~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAED-FAAGSGW-NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCEEEEeCCCCCCHHH-HHhhcCH-HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 57899999999988652 211 11 234455678888888654211 1111 11 00111112235777777776 56
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcc
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRI 159 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI 159 (235)
.+|.++|++.|+|.||.++..++..+|+ .+..+
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~ 125 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD--LFAAV 125 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc--cceEE
Confidence 7999999999999999999999998887 45544
No 102
>PRK04940 hypothetical protein; Provisional
Probab=98.31 E-value=3.6e-06 Score=68.52 Aligned_cols=89 Identities=18% Similarity=0.294 Sum_probs=51.9
Q ss_pred EEEEeCCCCCCCCCc--hHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEE
Q psy4317 56 VFYIHGFTEQANGES--GTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHV 133 (235)
Q Consensus 56 vi~iHG~~~s~~~~~--~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~l 133 (235)
||++|||.+++.+.- ...+. ++ ..+.+++ +++ ..++. ...+.+.+++..+...+. .+++.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~--~~-~p~~~~~--~l~-----~~~P~------~a~~~l~~~i~~~~~~~~-~~~~~l 64 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ--FI-DPDVRLI--SYS-----TLHPK------HDMQHLLKEVDKMLQLSD-DERPLI 64 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe--ee-CCCCeEE--ECC-----CCCHH------HHHHHHHHHHHHhhhccC-CCCcEE
Confidence 789999999987621 22222 23 2345554 443 11221 111223344433221111 256899
Q ss_pred EEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 134 IGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 134 IGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
||+||||.-|.++|.++. + +.|+++||.
T Consensus 65 iGSSLGGyyA~~La~~~g----~-~aVLiNPAv 92 (180)
T PRK04940 65 CGVGLGGYWAERIGFLCG----I-RQVIFNPNL 92 (180)
T ss_pred EEeChHHHHHHHHHHHHC----C-CEEEECCCC
Confidence 999999999999999873 4 446889985
No 103
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.27 E-value=3.7e-06 Score=86.73 Aligned_cols=105 Identities=21% Similarity=0.177 Sum_probs=74.8
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
++|+++++||+.++.. .| ..+.. .+.. +++|+.+|.++..... .....++.+++++.+.++.+ ....++
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~-~~l~~-~l~~-~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~----~~~~p~ 1135 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QF-SVLSR-YLDP-QWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQ----QPHGPY 1135 (1296)
T ss_pred CCCCeEEecCCCCchH-HH-HHHHH-hcCC-CCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhh----CCCCCE
Confidence 3578999999999875 24 45544 3444 6999999999865321 12246677777777777654 123479
Q ss_pred EEEEechhhHHHHHHHHhcCCCC-CCCcccccCCCCC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVD-KLPRITGLDPAFP 167 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g-~v~rI~~ldPa~p 167 (235)
+++||||||.+|..+|..+...+ ++..++.+|+..+
T Consensus 1136 ~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1136 HLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred EEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 99999999999999999764332 7888888886543
No 104
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.21 E-value=2.2e-05 Score=66.82 Aligned_cols=109 Identities=13% Similarity=0.131 Sum_probs=74.3
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCC-CCCCchh--h-hh-------cchHHHHHHHHHHHH
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGL-SAFPWYT--N-AA-------TNTHIVGHFIAAFIR 119 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~-~~~~~y~--~-~~-------~~~~~v~~~l~~~l~ 119 (235)
...|.||++|++.+-.. ..+.+.+.+..+ ||-|+++|+=.. +...... . .. .....+..++...++
T Consensus 25 ~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~ 101 (236)
T COG0412 25 GGFPGVIVLHEIFGLNP--HIRDVARRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALD 101 (236)
T ss_pred CCCCEEEEEecccCCch--HHHHHHHHHHhC-CcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHH
Confidence 33489999999888765 467777766554 899999997652 1111111 1 00 111455567788888
Q ss_pred HHHhcC-CCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 120 FLQSKG-FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 120 ~l~~~~-~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
.|.... .+.++|-++|+||||.++..++...+ +++..+..-|.
T Consensus 102 ~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~---~v~a~v~fyg~ 145 (236)
T COG0412 102 YLARQPQVDPKRIGVVGFCMGGGLALLAATRAP---EVKAAVAFYGG 145 (236)
T ss_pred HHHhCCCCCCceEEEEEEcccHHHHHHhhcccC---CccEEEEecCC
Confidence 887544 67899999999999999999988854 35555544443
No 105
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.21 E-value=7.5e-06 Score=78.95 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=61.5
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCC-Cchhhhhc-ch-HHHHHHHHHHHHHHHhcC-CCCc
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAF-PWYTNAAT-NT-HIVGHFIAAFIRFLQSKG-FPLH 129 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~-~~y~~~~~-~~-~~v~~~l~~~l~~l~~~~-~~~~ 129 (235)
|+||++||-........+......+.. .||.|+.+|+||.... ..|..+.. .. ....+++.+.++.|.+.+ ++.+
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~-~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLAS-AGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhc-CCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChH
Confidence 899999997654443212222233444 4899999999985331 12222111 00 112245556666665555 6889
Q ss_pred cEEEEEechhhHHHHHHHHhcC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~ 151 (235)
++.|.|||.||.++..++.+.+
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~ 495 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP 495 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc
Confidence 9999999999999999888765
No 106
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.19 E-value=8.8e-06 Score=75.03 Aligned_cols=115 Identities=17% Similarity=0.089 Sum_probs=70.5
Q ss_pred CCCCcEEEEEeC---CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCC----Cchh--hh-hc--chHHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHG---FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAF----PWYT--NA-AT--NTHIVGHFIAAF 117 (235)
Q Consensus 50 ~~~~p~vi~iHG---~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~----~~y~--~~-~~--~~~~v~~~l~~~ 117 (235)
..+.|++|+||| -.|+.+..+... ..|.+++++-|+.++||-+.-. ..+. .+ .. -+.+....|.++
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV 168 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWV 168 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHH
Confidence 345799999999 334444433322 2345555699999999976431 1111 00 01 122333334444
Q ss_pred HHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCC-CCCCcccccCCCCC
Q psy4317 118 IRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTV-DKLPRITGLDPAFP 167 (235)
Q Consensus 118 l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~-g~v~rI~~ldPa~p 167 (235)
-+.+...|-|++||+|.|+|.||+.+..+-.. |.- |.+.|.+++.++..
T Consensus 169 ~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 169 RDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 45555788899999999999999887644333 322 37888888877665
No 107
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.18 E-value=7.1e-06 Score=70.62 Aligned_cols=103 Identities=18% Similarity=0.148 Sum_probs=74.1
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEE
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHV 133 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~l 133 (235)
|++|++|+-.|.... +..+.. ++.. ...|+.++.++..... ....+.+.+++...+.|..++ +--..+|
T Consensus 1 ~pLF~fhp~~G~~~~--~~~L~~-~l~~-~~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~Q----P~GPy~L 69 (257)
T COG3319 1 PPLFCFHPAGGSVLA--YAPLAA-ALGP-LLPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQ----PEGPYVL 69 (257)
T ss_pred CCEEEEcCCCCcHHH--HHHHHH-Hhcc-CceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhC----CCCCEEE
Confidence 579999998887642 344443 4444 5889999998864311 123455665555555555542 4457999
Q ss_pred EEechhhHHHHHHHHhcCCCC-CCCcccccCCCCC
Q psy4317 134 IGFSLGAEIAGFTGKALGTVD-KLPRITGLDPAFP 167 (235)
Q Consensus 134 IGHSlGa~va~~~a~~~~~~g-~v~rI~~ldPa~p 167 (235)
+|+|+||.||..+|+++...| .|..++.||+..+
T Consensus 70 ~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 70 LGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999999999986666 8999999998877
No 108
>KOG4391|consensus
Probab=98.17 E-value=1.8e-06 Score=71.91 Aligned_cols=104 Identities=14% Similarity=0.215 Sum_probs=71.2
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGFPL 128 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~~~ 128 (235)
+.++||++++|+-.|+-. ..-.++.-+...-+.||+.++|||.+.+..-+. ..... -+-...++.|. ....+.
T Consensus 75 E~S~pTlLyfh~NAGNmG--hr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-E~GL~---lDs~avldyl~t~~~~dk 148 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMG--HRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS-EEGLK---LDSEAVLDYLMTRPDLDK 148 (300)
T ss_pred cCCCceEEEEccCCCccc--chhhHHHHHHHHcCceEEEEEeeccccCCCCcc-cccee---ccHHHHHHHHhcCccCCc
Confidence 448999999999988865 233455555555689999999999766432221 11111 12334567766 344678
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccc
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITG 161 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ 161 (235)
.++.+.|-|+||.||..+|..... ++..++.
T Consensus 149 tkivlfGrSlGGAvai~lask~~~--ri~~~iv 179 (300)
T KOG4391|consen 149 TKIVLFGRSLGGAVAIHLASKNSD--RISAIIV 179 (300)
T ss_pred ceEEEEecccCCeeEEEeeccchh--heeeeee
Confidence 899999999999999988877554 5655543
No 109
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.12 E-value=5.1e-05 Score=60.58 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=69.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC---c-hhhhhcch-HHHHHHHHHHHHHHHhc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP---W-YTNAATNT-HIVGHFIAAFIRFLQSK 124 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~---~-y~~~~~~~-~~v~~~l~~~l~~l~~~ 124 (235)
.+..-+||+.||-..+-++.....+..++..+ ++.|..++++...... . -+....+. +.....++++-..
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~---- 85 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG---- 85 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc----
Confidence 33444899999999998888888887766554 8999999988643210 0 01111111 1211234444433
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccccc
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGL 162 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~l 162 (235)
....+..+-||||||.++.+++..+.. .|..++.|
T Consensus 86 -l~~gpLi~GGkSmGGR~aSmvade~~A--~i~~L~cl 120 (213)
T COG3571 86 -LAEGPLIIGGKSMGGRVASMVADELQA--PIDGLVCL 120 (213)
T ss_pred -ccCCceeeccccccchHHHHHHHhhcC--CcceEEEe
Confidence 244578999999999999999998765 67777766
No 110
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.07 E-value=0.0001 Score=67.71 Aligned_cols=113 Identities=13% Similarity=0.042 Sum_probs=65.9
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCC---eEEEEEeCCCCC-CCCchhhhhcchHHHHHHHHHHHHHHHhcC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGD---FNIILVDWSGLS-AFPWYTNAATNTHIVGHFIAAFIRFLQSKG 125 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~---~nVi~vD~~~~~-~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~ 125 (235)
....|+|+++||-.-.... ....+.+.+.+.+. .-|+.+|-.... ....++....-...+.++|.-+|+......
T Consensus 206 ~~~~PvlyllDG~~w~~~~-~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~ 284 (411)
T PRK10439 206 PEERPLAILLDGQFWAESM-PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFS 284 (411)
T ss_pred CCCCCEEEEEECHHhhhcC-CHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCC
Confidence 3467999999993222221 12344455555432 456777753211 111222111112333333333333321122
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
.+.++..|+|+||||..|.+++.++|+ +++.++.+.|+
T Consensus 285 ~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs 322 (411)
T PRK10439 285 DDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGS 322 (411)
T ss_pred CCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccc
Confidence 366789999999999999999999988 89999988776
No 111
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.07 E-value=2.7e-05 Score=73.51 Aligned_cols=106 Identities=7% Similarity=0.051 Sum_probs=67.6
Q ss_pred CCCcEEEEEeCCCCCCCCCc----hHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCC
Q psy4317 51 RQMTTVFYIHGFTEQANGES----GTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGF 126 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~----~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~ 126 (235)
..++++++|+.|..... .+ .+.+++-++++ |+.|+++||++-..... ...+++..+.|.+.++.+.+. -
T Consensus 213 v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~q-G~~VflIsW~nP~~~~r----~~~ldDYv~~i~~Ald~V~~~-t 285 (560)
T TIGR01839 213 QHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKN-QLQVFIISWRNPDKAHR----EWGLSTYVDALKEAVDAVRAI-T 285 (560)
T ss_pred cCCCcEEEechhhhhhh-eeecCCcchHHHHHHHc-CCeEEEEeCCCCChhhc----CCCHHHHHHHHHHHHHHHHHh-c
Confidence 34678999999884332 12 13455555554 89999999998543211 122332224666667666532 2
Q ss_pred CCccEEEEEechhhHHHHH----HHHhcCCCCCCCcccccCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGF----TGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~----~a~~~~~~g~v~rI~~ldP 164 (235)
..++|+++||||||.++.. ++...++. +|+.+|.+..
T Consensus 286 G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~-~V~sltllat 326 (560)
T TIGR01839 286 GSRDLNLLGACAGGLTCAALVGHLQALGQLR-KVNSLTYLVS 326 (560)
T ss_pred CCCCeeEEEECcchHHHHHHHHHHHhcCCCC-ceeeEEeeec
Confidence 4578999999999999875 44444432 7999887644
No 112
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.04 E-value=8.2e-06 Score=74.30 Aligned_cols=109 Identities=17% Similarity=0.240 Sum_probs=62.4
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhc-CCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSK-GFPL 128 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~-~~~~ 128 (235)
+...|+||++-|.- +...++...+.+.+..+ |++++.+|.+|-+.+..++.. .+...+ ...++++|.+. -+|.
T Consensus 187 ~~p~P~VIv~gGlD-s~qeD~~~l~~~~l~~r-GiA~LtvDmPG~G~s~~~~l~-~D~~~l---~~aVLd~L~~~p~VD~ 260 (411)
T PF06500_consen 187 EKPYPTVIVCGGLD-SLQEDLYRLFRDYLAPR-GIAMLTVDMPGQGESPKWPLT-QDSSRL---HQAVLDYLASRPWVDH 260 (411)
T ss_dssp SS-EEEEEEE--TT-S-GGGGHHHHHCCCHHC-T-EEEEE--TTSGGGTTT-S--S-CCHH---HHHHHHHHHHSTTEEE
T ss_pred CCCCCEEEEeCCcc-hhHHHHHHHHHHHHHhC-CCEEEEEccCCCcccccCCCC-cCHHHH---HHHHHHHHhcCCccCh
Confidence 34455565555554 44434544444434445 899999999996654333321 222332 33456666533 3688
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++|.++|.|+||++|..+|..-++ ||+.++.+.|..
T Consensus 261 ~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~v 296 (411)
T PF06500_consen 261 TRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPV 296 (411)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---
T ss_pred hheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchH
Confidence 899999999999999999876555 899999988753
No 113
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.02 E-value=2.8e-05 Score=63.77 Aligned_cols=102 Identities=17% Similarity=0.293 Sum_probs=74.7
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEE
Q psy4317 55 TVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVI 134 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lI 134 (235)
.+||+-|=+|=.. ....+++++.++ |+.|+.+|- ..|.....+-++++.+++++++...+. ...+++.||
T Consensus 4 ~~v~~SGDgGw~~--~d~~~a~~l~~~-G~~VvGvds------l~Yfw~~rtP~~~a~Dl~~~i~~y~~~-w~~~~vvLi 73 (192)
T PF06057_consen 4 LAVFFSGDGGWRD--LDKQIAEALAKQ-GVPVVGVDS------LRYFWSERTPEQTAADLARIIRHYRAR-WGRKRVVLI 73 (192)
T ss_pred EEEEEeCCCCchh--hhHHHHHHHHHC-CCeEEEech------HHHHhhhCCHHHHHHHHHHHHHHHHHH-hCCceEEEE
Confidence 4667766222111 345677765554 899999993 456666667788899999999887632 245899999
Q ss_pred EechhhHHHHHHHHhcCCC--CCCCcccccCCCC
Q psy4317 135 GFSLGAEIAGFTGKALGTV--DKLPRITGLDPAF 166 (235)
Q Consensus 135 GHSlGa~va~~~a~~~~~~--g~v~rI~~ldPa~ 166 (235)
|+|.||-|.-.+..++|.. .+|..+++|.|+.
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999999998888888753 2899999998873
No 114
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.98 E-value=4.1e-05 Score=71.50 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=62.6
Q ss_pred CCCCcEEEEEeC--C-CCCCCCCchHHHHHHHHhcCC-eEEEEEeCCCCCCCCchh---hhhcc--hHHHHHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHG--F-TEQANGESGTTVKDAYLRRGD-FNIILVDWSGLSAFPWYT---NAATN--THIVGHFIAAFIRF 120 (235)
Q Consensus 50 ~~~~p~vi~iHG--~-~~s~~~~~~~~l~~~ll~~~~-~nVi~vD~~~~~~~~~y~---~~~~~--~~~v~~~l~~~l~~ 120 (235)
.+..|++|+||| | .++...... ..+....+ +-|+.++||.+....... ....+ +.++...|..+-+.
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~----~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~ 167 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPG----DGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDN 167 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCCh----HHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 356799999999 2 222222111 22333444 999999999543200000 00111 23333333333344
Q ss_pred HHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccC
Q psy4317 121 LQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLD 163 (235)
Q Consensus 121 l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ld 163 (235)
+.+.|.++++|+|.|||.||+.+..+...-...+.+.+++.+.
T Consensus 168 i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~s 210 (493)
T cd00312 168 IAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQS 210 (493)
T ss_pred HHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhc
Confidence 4466889999999999999999887665522112567766553
No 115
>PRK10115 protease 2; Provisional
Probab=97.97 E-value=6.2e-05 Score=73.44 Aligned_cols=108 Identities=12% Similarity=-0.021 Sum_probs=70.8
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhhhhcch--HHHHHHHHHHHHHHHhcC-
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTNAATNT--HIVGHFIAAFIRFLQSKG- 125 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~~~~~~--~~v~~~l~~~l~~l~~~~- 125 (235)
+.+.|++|++||-.+....+.+......++.+ |+.|+.++.||++... .|..+.... ...-+++...+++|.+.+
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~r-G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~ 520 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGY 520 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHHHHHHHHC-CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Confidence 34569999999955544333333333456676 7999999999976532 222211000 012245666677777656
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcCCCCCCCccc
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRIT 160 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~ 160 (235)
.+.+++.+.|-|.||.+++.+..+.|+ +.+-++
T Consensus 521 ~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v 553 (686)
T PRK10115 521 GSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVI 553 (686)
T ss_pred CChHHeEEEEECHHHHHHHHHHhcChh--heeEEE
Confidence 689999999999999999988887676 444444
No 116
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.95 E-value=1.8e-05 Score=55.93 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=45.0
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHH
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFI 118 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l 118 (235)
.+.+|+++||+..... ++..++..|.+ .++.|+++|++|.+.+........+++.+-+++.+++
T Consensus 15 ~k~~v~i~HG~~eh~~--ry~~~a~~L~~-~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSG--RYAHLAEFLAE-QGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHHHHH--HHHHHHHHHHh-CCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4679999999987765 56777766555 5899999999998765432223455666666666554
No 117
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.92 E-value=0.00013 Score=58.89 Aligned_cols=94 Identities=13% Similarity=0.160 Sum_probs=58.5
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEE
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHV 133 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~l 133 (235)
+.+|+|||+.+|....|......++. ++-.++... +. .+..++-++++-+.+. .-.+.++|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~-----~a~rveq~~------w~-----~P~~~dWi~~l~~~v~---a~~~~~vl 63 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP-----NARRVEQDD------WE-----APVLDDWIARLEKEVN---AAEGPVVL 63 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc-----cchhcccCC------CC-----CCCHHHHHHHHHHHHh---ccCCCeEE
Confidence 56899999999998778766544322 222232221 11 1111222333333332 12345999
Q ss_pred EEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 134 IGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 134 IGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
|+||||.-++..++.+... +|..+.++.|+-+.
T Consensus 64 VAHSLGc~~v~h~~~~~~~--~V~GalLVAppd~~ 96 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQR--QVAGALLVAPPDVS 96 (181)
T ss_pred EEecccHHHHHHHHHhhhh--ccceEEEecCCCcc
Confidence 9999999999998888765 79998888776533
No 118
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.91 E-value=8.7e-05 Score=60.79 Aligned_cols=98 Identities=20% Similarity=0.224 Sum_probs=65.8
Q ss_pred CCCCcEEEEEeC---CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCC-CCchhhhhcchHHHHHHHHHHHHHHHhcC
Q psy4317 50 NRQMTTVFYIHG---FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSA-FPWYTNAATNTHIVGHFIAAFIRFLQSKG 125 (235)
Q Consensus 50 ~~~~p~vi~iHG---~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~-~~~y~~~~~~~~~v~~~l~~~l~~l~~~~ 125 (235)
.+.+|..|++|= +.|+.+......+...+.++ |+.++.+|+|+-+. ...|......++ +.+..++++....
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~-G~atlRfNfRgVG~S~G~fD~GiGE~~----Da~aaldW~~~~h 99 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKR-GFATLRFNFRGVGRSQGEFDNGIGELE----DAAAALDWLQARH 99 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhC-CceEEeecccccccccCcccCCcchHH----HHHHHHHHHHhhC
Confidence 467889999997 55555544555666555554 89999999999333 234444444343 3445566665333
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
-+.....|.|+|.||.|++.++.+.++
T Consensus 100 p~s~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 100 PDSASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred CCchhhhhcccchHHHHHHHHHHhccc
Confidence 233334789999999999999999876
No 119
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.90 E-value=0.0001 Score=62.79 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=65.9
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHhcC----CeEEEEEeCCCCC-------CCCchhh-------hhcchHHHHHHHHH
Q psy4317 55 TVFYIHGFTEQANGESGTTVKDAYLRRG----DFNIILVDWSGLS-------AFPWYTN-------AATNTHIVGHFIAA 116 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~~~l~~~ll~~~----~~nVi~vD~~~~~-------~~~~y~~-------~~~~~~~v~~~l~~ 116 (235)
+.|||||+.|+.++ ...|++.++.++ ..-++.||-.+.- ....||. -..+....+.-+..
T Consensus 47 PTIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 47 PTIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ceEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 57799999999885 456666665432 2456667765521 1112221 11222333556666
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCC-C--CCCcccccC
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTV-D--KLPRITGLD 163 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~-g--~v~rI~~ld 163 (235)
.+..|.+ .++..++.+|||||||--+.++...+... . .+.+++.|+
T Consensus 125 ~msyL~~-~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~ 173 (288)
T COG4814 125 AMSYLQK-HYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLA 173 (288)
T ss_pred HHHHHHH-hcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEec
Confidence 7777653 35678999999999997776655544432 1 788888884
No 120
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.88 E-value=4.4e-05 Score=68.23 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=68.4
Q ss_pred CcEEEEEeCCCCCCCC---------CchHHHHHHH--HhcCCeEEEEEeCCCCC--CCC---------chhh--hhcchH
Q psy4317 53 MTTVFYIHGFTEQANG---------ESGTTVKDAY--LRRGDFNIILVDWSGLS--AFP---------WYTN--AATNTH 108 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~---------~~~~~l~~~l--l~~~~~nVi~vD~~~~~--~~~---------~y~~--~~~~~~ 108 (235)
...|+++||++++... .|+..+...= +.-..|.||++|--|+. ++. .|-. ...+++
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~ 130 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIR 130 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHH
Confidence 4479999999996532 1766554321 23335999999988742 211 0111 122344
Q ss_pred HHHHHHHHHHHHHHhcCCCCccEE-EEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 109 IVGHFIAAFIRFLQSKGFPLHKMH-VIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 109 ~v~~~l~~~l~~l~~~~~~~~~i~-lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
++.+.-..+++.| .++++. +||-||||+.|...+..+|+ +|.+++.|..+
T Consensus 131 D~V~aq~~ll~~L-----GI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~ 181 (368)
T COG2021 131 DMVRAQRLLLDAL-----GIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATA 181 (368)
T ss_pred HHHHHHHHHHHhc-----CcceEeeeeccChHHHHHHHHHHhChH--HHhhhheeccc
Confidence 4333333344444 567887 99999999999999999998 89999888653
No 121
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.83 E-value=0.0001 Score=64.05 Aligned_cols=102 Identities=21% Similarity=0.188 Sum_probs=66.7
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCC---CCC-Cch---hhhhcchHHHHHHHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGL---SAF-PWY---TNAATNTHIVGHFIAAFIRFLQ 122 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~---~~~-~~y---~~~~~~~~~v~~~l~~~l~~l~ 122 (235)
..+.|.||++||-.++....-...=.+++..+.+|-|+.+|--.. ..- ... ..-...+.+++ .|.+++..|.
T Consensus 58 ~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVg-flr~lva~l~ 136 (312)
T COG3509 58 PSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVG-FLRALVAKLV 136 (312)
T ss_pred CCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHH-HHHHHHHHHH
Confidence 445689999999888864321000013455566898888852211 110 111 11123445554 5778888877
Q ss_pred -hcCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 123 -SKGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 123 -~~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
+.++++++|++.|.|-||.++..++-..++
T Consensus 137 ~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~ 167 (312)
T COG3509 137 NEYGIDPARVYVTGLSNGGRMANRLACEYPD 167 (312)
T ss_pred HhcCcCcceEEEEeeCcHHHHHHHHHhcCcc
Confidence 788999999999999999999998888776
No 122
>KOG2112|consensus
Probab=97.81 E-value=0.00019 Score=59.40 Aligned_cols=106 Identities=20% Similarity=0.358 Sum_probs=72.5
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCC-------CCC-Cch---------hhhhcchHHHHHHH
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGL-------SAF-PWY---------TNAATNTHIVGHFI 114 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~-------~~~-~~y---------~~~~~~~~~v~~~l 114 (235)
.+.+||++||..++... |.+.+ .. +.-.+...|.+--+.. ... ..| ..........+..+
T Consensus 2 h~atIi~LHglGDsg~~-~~~~~-~~-l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i 78 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSG-WAQFL-KQ-LPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNI 78 (206)
T ss_pred ceEEEEEEecCCCCCcc-HHHHH-Hc-CCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHH
Confidence 35689999999999884 65444 33 4444677777643321 000 011 11234456677788
Q ss_pred HHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccccc
Q psy4317 115 AAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGL 162 (235)
Q Consensus 115 ~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~l 162 (235)
+++++...+.|++.++|.+-|+||||.+|.+++..++. .+..+..+
T Consensus 79 ~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~--~l~G~~~~ 124 (206)
T KOG2112|consen 79 ANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK--ALGGIFAL 124 (206)
T ss_pred HHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc--ccceeecc
Confidence 88888877889999999999999999999999998854 45554443
No 123
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.78 E-value=9.3e-05 Score=63.91 Aligned_cols=115 Identities=11% Similarity=0.106 Sum_probs=72.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHH--------HHHHHhcCCeEEEEEeCCCCCCC-CchhhhhcchHHHHHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTV--------KDAYLRRGDFNIILVDWSGLSAF-PWYTNAATNTHIVGHFIAAFIRF 120 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l--------~~~ll~~~~~nVi~vD~~~~~~~-~~y~~~~~~~~~v~~~l~~~l~~ 120 (235)
....|+||..|+|..+......... ...+.++ ||.|+.+|.||.+.+ ..+... .+.-+++..++|++
T Consensus 17 ~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~-GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W 92 (272)
T PF02129_consen 17 GGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAER-GYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEW 92 (272)
T ss_dssp SSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHT-T-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHH
T ss_pred CCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhC-CCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHH
Confidence 4567899999999965421111110 0115554 899999999995443 333211 34455778888888
Q ss_pred HHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCC
Q psy4317 121 LQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYG 170 (235)
Q Consensus 121 l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~ 170 (235)
+.+......+|-++|.|.+|..+..+|..-+. .++.|+...+....+.
T Consensus 93 ~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 93 IAAQPWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHCTTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred HHhCCCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 87555555699999999999999999986555 5777666655544443
No 124
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.78 E-value=0.00014 Score=64.47 Aligned_cols=94 Identities=14% Similarity=0.211 Sum_probs=63.0
Q ss_pred CCCcEEEEEeCCCCCCCCCc-----hHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH--h
Q psy4317 51 RQMTTVFYIHGFTEQANGES-----GTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ--S 123 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~-----~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~--~ 123 (235)
.....|++.-|=.+.-.... ...+. .+....+.||++++|||-+.+...+ +.+.+..+-...++.|. +
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~-~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQ-RFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHH-HHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhcc
Confidence 45668888888554433210 01222 2333457999999999965544333 23555566666777776 3
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
.|.+.++|.+-||||||.|++.+.+.
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHh
Confidence 67889999999999999999887665
No 125
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.76 E-value=0.00021 Score=62.77 Aligned_cols=109 Identities=17% Similarity=0.205 Sum_probs=65.7
Q ss_pred CCcEEEEEeCCCCCCCC-CchHHHHHHHHhcCCeEEEEEeCCC-CCCCCchhhhhcchHHHHHHHHHHHHHHHhc--C-C
Q psy4317 52 QMTTVFYIHGFTEQANG-ESGTTVKDAYLRRGDFNIILVDWSG-LSAFPWYTNAATNTHIVGHFIAAFIRFLQSK--G-F 126 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~-~~~~~l~~~ll~~~~~nVi~vD~~~-~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~--~-~ 126 (235)
.+..||||-|.++..-+ ++...|++++ ...+|.|+-+-++. +.. | ...+.+.-+++|+++++.|... | .
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL-~~~~wsl~q~~LsSSy~G---~--G~~SL~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEAL-EETGWSLFQVQLSSSYSG---W--GTSSLDRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHH-T-TT-EEEEE--GGGBTT---S---S--HHHHHHHHHHHHHHHHHHS----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHh-ccCCeEEEEEEecCccCC---c--CcchhhhHHHHHHHHHHHHHHhhcccc
Confidence 45689999999886543 5788888765 44589999998875 222 1 2234555567888999988843 2 4
Q ss_pred CCccEEEEEechhhHHHHHHHHhcCC---CCCCCcccccCCCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALGT---VDKLPRITGLDPAF 166 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~~---~g~v~rI~~ldPa~ 166 (235)
..++|+|+|||-|.|-+..+...... ..+|.++++-.|.+
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 67899999999999999987776432 11788877765543
No 126
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.75 E-value=0.00018 Score=63.95 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=66.0
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCC-CCCc-----------h-hhhhcc------hHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLS-AFPW-----------Y-TNAATN------THIV 110 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~-~~~~-----------y-~~~~~~------~~~v 110 (235)
....|.||.+||+.+... .|...+ .+... |+-|+.+|.+|.+ .+.. | .....+ .+.+
T Consensus 80 ~~~~Pavv~~hGyg~~~~-~~~~~~--~~a~~-G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSG-DPFDLL--PWAAA-GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp SSSEEEEEEE--TT--GG-GHHHHH--HHHHT-T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred CCCcCEEEEecCCCCCCC-Cccccc--ccccC-CeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 456788999999998854 344333 24444 7999999999854 2111 1 011111 2344
Q ss_pred HHHHHHHHHHHHh-cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 111 GHFIAAFIRFLQS-KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 111 ~~~l~~~l~~l~~-~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
-.+....++.|.+ -.+|.++|.+.|.|.||.++..+|..- + +|+.++..-|..
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd-~--rv~~~~~~vP~l 209 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD-P--RVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-S--T-SEEEEESESS
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-c--cccEEEecCCCc
Confidence 4556666777663 336789999999999999999988863 3 788877766654
No 127
>KOG2984|consensus
Probab=97.75 E-value=4.2e-05 Score=63.24 Aligned_cols=112 Identities=13% Similarity=0.073 Sum_probs=80.5
Q ss_pred CCCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCc--hhhhhcchHHHHHHHHHHHHHHHhc
Q psy4317 47 SHMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPW--YTNAATNTHIVGHFIAAFIRFLQSK 124 (235)
Q Consensus 47 ~~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~--y~~~~~~~~~v~~~l~~~l~~l~~~ 124 (235)
.....+...|+++.|-.|+..++|..++.. +.....+.|++.|-+|.+.+.. ....+.-...-+++...+++.|
T Consensus 36 ~~~G~G~~~iLlipGalGs~~tDf~pql~~-l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL--- 111 (277)
T KOG2984|consen 36 CKYGHGPNYILLIPGALGSYKTDFPPQLLS-LFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL--- 111 (277)
T ss_pred eecCCCCceeEecccccccccccCCHHHHh-cCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh---
Confidence 334555667999999999998888888754 4333349999999999766321 1112233344455555666665
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
+.+++.|.|.|=||..|..+|...++ +|.|++....+.
T Consensus 112 --k~~~fsvlGWSdGgiTalivAak~~e--~v~rmiiwga~a 149 (277)
T KOG2984|consen 112 --KLEPFSVLGWSDGGITALIVAAKGKE--KVNRMIIWGAAA 149 (277)
T ss_pred --CCCCeeEeeecCCCeEEEEeeccChh--hhhhheeecccc
Confidence 78999999999999999998888777 799988775543
No 128
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.75 E-value=7.4e-05 Score=66.88 Aligned_cols=105 Identities=15% Similarity=0.194 Sum_probs=65.3
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeE---EEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCCCC
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFN---IILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGFPL 128 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~n---Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~~~ 128 (235)
+-+++++||...+.. .|. .+. .++...++. +..+++++.. ..++. ...+..|...++... .. ..
T Consensus 59 ~~pivlVhG~~~~~~-~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~--~~~~~-----~~~~~ql~~~V~~~l~~~--ga 126 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFL-PLD-YRLAILGWLTNGVYAFELSGGD--GTYSL-----AVRGEQLFAYVDEVLAKT--GA 126 (336)
T ss_pred CceEEEEccCcCCcc-hhh-hhh-hhhcchHHHhcccccccccccC--CCccc-----cccHHHHHHHHHHHHhhc--CC
Confidence 448999999955554 232 332 234444555 7888887552 22221 122234444444432 22 35
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLY 169 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f 169 (235)
+++.+|||||||.++.++...++...+|++++.|.++-..-
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 89999999999999999999886323899999887664443
No 129
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.74 E-value=0.0002 Score=64.62 Aligned_cols=107 Identities=19% Similarity=0.158 Sum_probs=65.9
Q ss_pred CCcEEEEEeCCCCCCCCC--chHHHHH--HHHhcCCeEEEEEeCCCCC---CCCchhhhhcchHHHHHHHHHHHHHHH-h
Q psy4317 52 QMTTVFYIHGFTEQANGE--SGTTVKD--AYLRRGDFNIILVDWSGLS---AFPWYTNAATNTHIVGHFIAAFIRFLQ-S 123 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~--~~~~l~~--~ll~~~~~nVi~vD~~~~~---~~~~y~~~~~~~~~v~~~l~~~l~~l~-~ 123 (235)
+.|++|++||-+=--... ....+.. .++. +..++++||+..+ ....|+... .++.+..+.|. +
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL-------~qlv~~Y~~Lv~~ 191 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQL-------RQLVATYDYLVES 191 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHH-------HHHHHHHHHHHhc
Confidence 479999999943222211 1111211 1232 5789999999866 334555321 23445555665 4
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHhcCCCC---CCCcccccCCCCCCC
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKALGTVD---KLPRITGLDPAFPLY 169 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g---~v~rI~~ldPa~p~f 169 (235)
.| .++|+|+|-|.||+++..+.+++.... .-++++++.|-....
T Consensus 192 ~G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 192 EG--NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred cC--CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 44 479999999999999988777765421 456777777765443
No 130
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.72 E-value=0.0001 Score=68.25 Aligned_cols=90 Identities=7% Similarity=-0.047 Sum_probs=56.5
Q ss_pred chHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 70 SGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 70 ~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
.+..+++.|.+. ||.+ ..|+.+.+-+..+. .......++++++++.+.+. ....+++||||||||.++..++..
T Consensus 109 ~~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~-~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 109 YFHDMIEQLIKW-GYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKA-SGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHc-CCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHH-cCCCCEEEEEECHhHHHHHHHHHH
Confidence 345666665554 6654 67877765422211 12233445677777766532 234789999999999999987766
Q ss_pred cCCC--CCCCcccccCCC
Q psy4317 150 LGTV--DKLPRITGLDPA 165 (235)
Q Consensus 150 ~~~~--g~v~rI~~ldPa 165 (235)
.++. +.|++++.|.++
T Consensus 183 ~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred CCHhHHhHhccEEEECCC
Confidence 5542 268888888443
No 131
>KOG3724|consensus
Probab=97.72 E-value=0.00032 Score=67.90 Aligned_cols=112 Identities=16% Similarity=0.209 Sum_probs=63.2
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHHHHHHH---------------hcCCeEEEEEeCCCCCCCCchhh-hhcchHHHHH
Q psy4317 49 MNRQMTTVFYIHGFTEQANGESGTTVKDAYL---------------RRGDFNIILVDWSGLSAFPWYTN-AATNTHIVGH 112 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll---------------~~~~~nVi~vD~~~~~~~~~y~~-~~~~~~~v~~ 112 (235)
...+.-+|+||.|=.|+... .+.++..-. ....+..+++|+.+--. .-+-. -...++.|-+
T Consensus 85 lelsGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~t-Am~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 85 LELSGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFT-AMHGHILLDQTEYVND 161 (973)
T ss_pred ccCCCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhh-hhccHhHHHHHHHHHH
Confidence 35567789999998888652 233322111 12347888888876211 00111 1233455544
Q ss_pred HHHHHHHHHHh-cCCC---CccEEEEEechhhHHHHHHHHhcCCC-CCCCcccccC
Q psy4317 113 FIAAFIRFLQS-KGFP---LHKMHVIGFSLGAEIAGFTGKALGTV-DKLPRITGLD 163 (235)
Q Consensus 113 ~l~~~l~~l~~-~~~~---~~~i~lIGHSlGa~va~~~a~~~~~~-g~v~rI~~ld 163 (235)
+|...++...+ ...+ +..|.||||||||.||..+...-... |.|..|+-+.
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 55443333322 1233 77899999999999998766542111 2677776653
No 132
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.72 E-value=0.00013 Score=61.76 Aligned_cols=155 Identities=18% Similarity=0.126 Sum_probs=85.8
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEE
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMH 132 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~ 132 (235)
++.+|.+|=-+++.. .++.... .+.. +..+++|.|+|.+.... .....+++.+++.|+.-+.- -..-..+.
T Consensus 7 ~~~L~cfP~AGGsa~--~fr~W~~-~lp~-~iel~avqlPGR~~r~~-ep~~~di~~Lad~la~el~~----~~~d~P~a 77 (244)
T COG3208 7 RLRLFCFPHAGGSAS--LFRSWSR-RLPA-DIELLAVQLPGRGDRFG-EPLLTDIESLADELANELLP----PLLDAPFA 77 (244)
T ss_pred CceEEEecCCCCCHH--HHHHHHh-hCCc-hhheeeecCCCcccccC-CcccccHHHHHHHHHHHhcc----ccCCCCee
Confidence 445555654444443 2333333 2332 68999999999654211 11234566665555555541 02335689
Q ss_pred EEEechhhHHHHHHHHhcCCCC-CCCcccccCCCCCCCCCCCCCCCCCccCCCeeEEEeeCCCC----------CCCccc
Q psy4317 133 VIGFSLGAEIAGFTGKALGTVD-KLPRITGLDPAFPLYGFTGGEGHLSKEDADFVDVIHTDGGI----------LGFPVP 201 (235)
Q Consensus 133 lIGHSlGa~va~~~a~~~~~~g-~v~rI~~ldPa~p~f~~~~~~~~l~~~dA~~v~viht~~~~----------~G~~~~ 201 (235)
+.||||||.+|-.+|+.+.+.| .+..+....-..|...... .....+|+.+++-+---++. .-+..|
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~--~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LP 155 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGK--QIHHLDDADFLADLVDLGGTPPELLEDPELMALFLP 155 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccC--CccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHH
Confidence 9999999999999999987654 4344444444455333322 22334667666643221110 112345
Q ss_pred ccceeeecCCCCCCCCC
Q psy4317 202 IGHADFFPNGGFPVQPG 218 (235)
Q Consensus 202 ~g~~d~y~ngg~~~qpg 218 (235)
+=..||....+-+.+|-
T Consensus 156 ilRAD~~~~e~Y~~~~~ 172 (244)
T COG3208 156 ILRADFRALESYRYPPP 172 (244)
T ss_pred HHHHHHHHhcccccCCC
Confidence 66678877766655554
No 133
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.71 E-value=0.001 Score=58.88 Aligned_cols=135 Identities=15% Similarity=0.133 Sum_probs=83.1
Q ss_pred CCceeecCCcccccc---CCCCCCCcEEEEEeCCCCCCCCC-chHHHHHHHHhcCCeEEEEEeCCCCCC--CCc------
Q psy4317 32 TPDILRAGHEMDLKM---SHMNRQMTTVFYIHGFTEQANGE-SGTTVKDAYLRRGDFNIILVDWSGLSA--FPW------ 99 (235)
Q Consensus 32 ~~~~i~~~~~~~i~~---~~~~~~~p~vi~iHG~~~s~~~~-~~~~l~~~ll~~~~~nVi~vD~~~~~~--~~~------ 99 (235)
..+.|..++...+.- ..-.+.+-.||++|||..+.+.+ ....+...+-.. |++.+++-.+.... ...
T Consensus 63 e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~-GW~Tlsit~P~~~~~~~p~~~~~~~ 141 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDH-GWATLSITLPDPAPPASPNRATEAE 141 (310)
T ss_pred hcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhc-CceEEEecCCCcccccCCccCCCCC
Confidence 345566554432211 11133455899999999998742 345565555444 79999998877110 000
Q ss_pred ---------hhh---------------hhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCC
Q psy4317 100 ---------YTN---------------AATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDK 155 (235)
Q Consensus 100 ---------y~~---------------~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~ 155 (235)
... .......+...|..++..+.+.+ ..++.||||+.||..+..+....+.. .
T Consensus 142 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~--~~~ivlIg~G~gA~~~~~~la~~~~~-~ 218 (310)
T PF12048_consen 142 EVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG--GKNIVLIGHGTGAGWAARYLAEKPPP-M 218 (310)
T ss_pred CCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHhcCCCc-c
Confidence 000 00112345556667777665543 46799999999998887666654433 6
Q ss_pred CCcccccCCCCCCCC
Q psy4317 156 LPRITGLDPAFPLYG 170 (235)
Q Consensus 156 v~rI~~ldPa~p~f~ 170 (235)
+..+|.++|-.|.-.
T Consensus 219 ~daLV~I~a~~p~~~ 233 (310)
T PF12048_consen 219 PDALVLINAYWPQPD 233 (310)
T ss_pred cCeEEEEeCCCCcch
Confidence 899999999877644
No 134
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.67 E-value=5.7e-05 Score=63.90 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=36.2
Q ss_pred HHHHHHH-hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 116 AFIRFLQ-SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 116 ~~l~~l~-~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+++..+. +.....++..|+|+||||..|.+++.+.|+ ..+.++++.|+
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcc
Confidence 3444444 344434448999999999999999999988 79999888765
No 135
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.66 E-value=0.00015 Score=65.38 Aligned_cols=106 Identities=15% Similarity=0.204 Sum_probs=56.4
Q ss_pred CCCCcEEEEEeCCCCCCCC----------------CchHHHHHHHHhcCCeEEEEEeCCCCCCCC---------c--hhh
Q psy4317 50 NRQMTTVFYIHGFTEQANG----------------ESGTTVKDAYLRRGDFNIILVDWSGLSAFP---------W--YTN 102 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~----------------~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~---------~--y~~ 102 (235)
...-|.||.+||..+.... .+...+...+. +.||-|+++|-.+.++.. + |..
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA-k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~ 190 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA-KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQA 190 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH-TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH-hCCCEEEEEccccccccccccccccccchhHHH
Confidence 4566789999997654311 01223454444 458999999998854311 1 111
Q ss_pred hhcch--------HHHHHHHHHHHHHHHh-cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcc
Q psy4317 103 AATNT--------HIVGHFIAAFIRFLQS-KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRI 159 (235)
Q Consensus 103 ~~~~~--------~~v~~~l~~~l~~l~~-~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI 159 (235)
...+. ...+.+.-..+++|.+ -.++.++|-++||||||..+.++|.. .+ +|.-.
T Consensus 191 la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL-Dd--RIka~ 253 (390)
T PF12715_consen 191 LARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL-DD--RIKAT 253 (390)
T ss_dssp HHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--T--T--EE
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc-ch--hhHhH
Confidence 11111 2222333345566653 34789999999999999999998887 33 56443
No 136
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.64 E-value=0.00019 Score=66.97 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=61.7
Q ss_pred CCCCcEEEEEeCCCCCCCCC--------ch-----HHHH-HHHHhcCCeEEEEEeCCCCCCCCchh---hhhcchHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGE--------SG-----TTVK-DAYLRRGDFNIILVDWSGLSAFPWYT---NAATNTHIVGH 112 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~--------~~-----~~l~-~~ll~~~~~nVi~vD~~~~~~~~~y~---~~~~~~~~v~~ 112 (235)
..++|++|+++|-.|.++.. +. ..+. +.+.-....|++.+|.+.+.. ..|. ....+.+.+++
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G-~S~~~~~~~~~~~~~~a~ 152 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVG-FSYADKADYDHNESEVSE 152 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcC-cccCCCCCCCCChHHHHH
Confidence 34678999999987776421 00 0000 111111248999999874321 1111 11244577888
Q ss_pred HHHHHHHHHHh-c-CCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 113 FIAAFIRFLQS-K-GFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 113 ~l~~~l~~l~~-~-~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
++.++++.+.+ . .+...+++|+|||+||+.+-.+|.++
T Consensus 153 d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 153 DMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred HHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHH
Confidence 88888876542 2 13457999999999999998777765
No 137
>KOG2624|consensus
Probab=97.64 E-value=7.9e-05 Score=68.05 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=78.8
Q ss_pred ccccCCCCCCCcEEEEEeCCCCCCCCCchH-----HHHHHHHhcCCeEEEEEeCCCC--CCC-Cchhhh------hcchH
Q psy4317 43 DLKMSHMNRQMTTVFYIHGFTEQANGESGT-----TVKDAYLRRGDFNIILVDWSGL--SAF-PWYTNA------ATNTH 108 (235)
Q Consensus 43 ~i~~~~~~~~~p~vi~iHG~~~s~~~~~~~-----~l~~~ll~~~~~nVi~vD~~~~--~~~-~~y~~~------~~~~~ 108 (235)
.|+..+ ..+|+|++.||...++.. |.. .++- +|...||.|-+-+-||. +.. ..+... ..+..
T Consensus 65 RIp~~~--~~rp~Vll~HGLl~sS~~-Wv~n~p~~sLaf-~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~ 140 (403)
T KOG2624|consen 65 RIPRGK--KKRPVVLLQHGLLASSSS-WVLNGPEQSLAF-LLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWH 140 (403)
T ss_pred eecCCC--CCCCcEEEeecccccccc-ceecCccccHHH-HHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchh
Confidence 454444 789999999999888763 532 2222 24445899999999983 210 011110 12233
Q ss_pred HHH-HHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCC-CCCCcccccCCCC
Q psy4317 109 IVG-HFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTV-DKLPRITGLDPAF 166 (235)
Q Consensus 109 ~v~-~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~-g~v~rI~~ldPa~ 166 (235)
++| .||-.+|+.+.+.. ..++++.||||.|+.+...+...-++. .+|+...+|.|+.
T Consensus 141 Em~~yDLPA~IdyIL~~T-~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 141 EMGTYDLPAMIDYILEKT-GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhhhcCHHHHHHHHHHhc-cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 333 36778888766332 458999999999999887766665443 2899999999987
No 138
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.64 E-value=0.00046 Score=61.87 Aligned_cols=95 Identities=18% Similarity=0.133 Sum_probs=60.7
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCC--CC-Cchhh----hhcchHHHHHHHHHHHHHHHh
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLS--AF-PWYTN----AATNTHIVGHFIAAFIRFLQS 123 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~--~~-~~y~~----~~~~~~~v~~~l~~~l~~l~~ 123 (235)
...|.|++-||.+++.+. +.++++.+... +|-|..+|.++.. +. ..|.. ......+-..+|..+|+.|.+
T Consensus 69 ~~~PlvvlshG~Gs~~~~--f~~~A~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~ 145 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTG--FAWLAEHLASY-GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQ 145 (365)
T ss_pred CcCCeEEecCCCCCCccc--hhhhHHHHhhC-ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHH
Confidence 468999999999998664 45667666555 7999999999832 11 11111 000111122344455554442
Q ss_pred c--------CCCCccEEEEEechhhHHHHHHHH
Q psy4317 124 K--------GFPLHKMHVIGFSLGAEIAGFTGK 148 (235)
Q Consensus 124 ~--------~~~~~~i~lIGHSlGa~va~~~a~ 148 (235)
. .++..+|-++|||+||+.+++.+.
T Consensus 146 ~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 146 LTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred hhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 2 267889999999999999987653
No 139
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.63 E-value=0.00022 Score=62.18 Aligned_cols=101 Identities=11% Similarity=0.118 Sum_probs=57.9
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHH-----HHh-cCCeEEEEEeCCC-CCCCCchhhhhcchHHHHHHHHHHHH-HHH-h
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDA-----YLR-RGDFNIILVDWSG-LSAFPWYTNAATNTHIVGHFIAAFIR-FLQ-S 123 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~-----ll~-~~~~nVi~vD~~~-~~~~~~y~~~~~~~~~v~~~l~~~l~-~l~-~ 123 (235)
-|.|+|+||-....+.. ...+... +.. +-.+-|+++-|.. ..++.. ++...-...-+++. .|. +
T Consensus 191 ~PLvlfLHgagq~g~dn-~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~------~t~~~l~~~idli~~vlas~ 263 (387)
T COG4099 191 YPLVLFLHGAGQGGSDN-DKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE------KTLLYLIEKIDLILEVLAST 263 (387)
T ss_pred ccEEEEEecCCCCCchh-hhhhhcCccceeeecccCceEEEccccccccccccc------ccchhHHHHHHHHHHHHhhc
Confidence 48999999987766532 1111110 011 1124566666665 222111 11111122333443 333 5
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccccc
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGL 162 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~l 162 (235)
..+|.++|+++|.|+||..+..++..+|+ ....++.+
T Consensus 264 ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~i 300 (387)
T COG4099 264 YNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPI 300 (387)
T ss_pred cCcccceEEEEeecCcchhhHHHHHhCch--hhheeeee
Confidence 67899999999999999999999999987 34444333
No 140
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.60 E-value=0.00052 Score=61.25 Aligned_cols=117 Identities=9% Similarity=0.112 Sum_probs=73.0
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCc------hhhhhcch----HHHHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPW------YTNAATNT----HIVGHFIAAFIR 119 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~------y~~~~~~~----~~v~~~l~~~l~ 119 (235)
.+.+|.+|.+.|-++.....-...++..+++. |+.-+.+.-+-++.... ....+.+. .....+...++.
T Consensus 89 ~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 89 SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred cCCCceEEEecCCCccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 35688888899977654321122347777777 79999998776543110 00111111 112234455677
Q ss_pred HHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC--CCCCC
Q psy4317 120 FLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF--PLYGF 171 (235)
Q Consensus 120 ~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~--p~f~~ 171 (235)
++.+.|+ .++-|.|.||||++|.++|...+. .|.-+-.|.+.. +.|..
T Consensus 168 Wl~~~G~--~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~~sAs~vFt~ 217 (348)
T PF09752_consen 168 WLEREGY--GPLGLTGISMGGHMAALAASNWPR--PVALVPCLSWSSASVVFTE 217 (348)
T ss_pred HHHhcCC--CceEEEEechhHhhHHhhhhcCCC--ceeEEEeecccCCCcchhh
Confidence 7775564 589999999999999999999876 566555555443 34543
No 141
>COG3150 Predicted esterase [General function prediction only]
Probab=97.58 E-value=0.00074 Score=54.22 Aligned_cols=92 Identities=17% Similarity=0.284 Sum_probs=55.1
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEE
Q psy4317 56 VFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIG 135 (235)
Q Consensus 56 vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIG 135 (235)
++++|||.+|..+. -..+..++++. .+-.+.++-..- ..+ .+...+.+.+++..+ ..++..|||
T Consensus 2 ilYlHGFnSSP~sh-ka~l~~q~~~~---~~~~i~y~~p~l-~h~------p~~a~~ele~~i~~~-----~~~~p~ivG 65 (191)
T COG3150 2 ILYLHGFNSSPGSH-KAVLLLQFIDE---DVRDIEYSTPHL-PHD------PQQALKELEKAVQEL-----GDESPLIVG 65 (191)
T ss_pred eEEEecCCCCcccH-HHHHHHHHHhc---cccceeeecCCC-CCC------HHHHHHHHHHHHHHc-----CCCCceEEe
Confidence 78999999988753 33344445543 233333332211 122 233334444455443 234589999
Q ss_pred echhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 136 FSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 136 HSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
-||||.-|.+++.... ++. +.++|+.--
T Consensus 66 ssLGGY~At~l~~~~G----ira-v~~NPav~P 93 (191)
T COG3150 66 SSLGGYYATWLGFLCG----IRA-VVFNPAVRP 93 (191)
T ss_pred ecchHHHHHHHHHHhC----Chh-hhcCCCcCc
Confidence 9999999999998864 433 578888533
No 142
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.51 E-value=0.00073 Score=59.40 Aligned_cols=101 Identities=10% Similarity=0.063 Sum_probs=62.0
Q ss_pred cEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchh-hhhcchHHHHHHHHHHHHHHHhcCCCCccEE
Q psy4317 54 TTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYT-NAATNTHIVGHFIAAFIRFLQSKGFPLHKMH 132 (235)
Q Consensus 54 p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~-~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~ 132 (235)
-++|+-||.+++...+-...+.+.+....|.-+.++-...... ..|. ..-..++.+.+.|++ +..| .+-++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~-~s~~~~~~~Qve~vce~l~~-~~~l------~~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGNGVG-DSWLMPLTQQAEIACEKVKQ-MKEL------SQGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECCCcc-ccceeCHHHHHHHHHHHHhh-chhh------hCcEE
Confidence 3588999999988765444444333222455566665544322 2232 222344555555554 3333 24589
Q ss_pred EEEechhhHHHHHHHHhcCC-CCCCCcccccC
Q psy4317 133 VIGFSLGAEIAGFTGKALGT-VDKLPRITGLD 163 (235)
Q Consensus 133 lIGHSlGa~va~~~a~~~~~-~g~v~rI~~ld 163 (235)
+||||-||.++..+..+.+. . +|..++-|.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p-~V~nlISlg 128 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGP-PVYNYISLA 128 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCC-CcceEEEec
Confidence 99999999999988888765 3 687777664
No 143
>PLN02606 palmitoyl-protein thioesterase
Probab=97.50 E-value=0.0008 Score=59.07 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=58.9
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHh-cCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLR-RGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~-~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
..+||+.||.+++....-...+.+ ++. ..+.-+..+-.......+.+-..-..++.+.+.|++ +..| .+-+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~-~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~-~~~L------~~G~ 97 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQ-FLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQ-MKEL------SEGY 97 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHH-HHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhc-chhh------cCce
Confidence 446899999997776544445544 333 223433333321111111112222344555555554 3333 2458
Q ss_pred EEEEechhhHHHHHHHHhcCC-CCCCCcccccC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGT-VDKLPRITGLD 163 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~-~g~v~rI~~ld 163 (235)
++||||-||+++..+..+.+. . +|..++-|.
T Consensus 98 naIGfSQGglflRa~ierc~~~p-~V~nlISlg 129 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAP-PVINYVSLG 129 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCC-CcceEEEec
Confidence 999999999999988888765 3 677777663
No 144
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.42 E-value=0.00037 Score=65.12 Aligned_cols=111 Identities=11% Similarity=0.020 Sum_probs=57.8
Q ss_pred CCcEEEEEeC--CCC-CCCCCchHHHHHHHHhcCCeEEEEEeCCCCCC----CCchhhhhcchH--HHHHHHHHHHHHHH
Q psy4317 52 QMTTVFYIHG--FTE-QANGESGTTVKDAYLRRGDFNIILVDWSGLSA----FPWYTNAATNTH--IVGHFIAAFIRFLQ 122 (235)
Q Consensus 52 ~~p~vi~iHG--~~~-s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~----~~~y~~~~~~~~--~v~~~l~~~l~~l~ 122 (235)
..|++|+||| |.. +.+.... .- ..++..++.-||.++||-+.- .........|.. +.-..|.++-+.+.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~-~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPY-DG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGG-HT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGG
T ss_pred ccceEEEeecccccCCCcccccc-cc-cccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhh
Confidence 5799999999 222 2211122 21 233444589999999997421 010000013332 22223333333344
Q ss_pred hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCC
Q psy4317 123 SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 123 ~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldP 164 (235)
..|=|+++|+|.|||.||..+......-...+.+.|.++...
T Consensus 202 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 202 AFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 678899999999999999988764444111238999887754
No 145
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.40 E-value=0.0012 Score=53.09 Aligned_cols=79 Identities=13% Similarity=0.015 Sum_probs=51.4
Q ss_pred CeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCC-CCCcccc
Q psy4317 83 DFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVD-KLPRITG 161 (235)
Q Consensus 83 ~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g-~v~rI~~ 161 (235)
++.|+.+|.++....... ....+..+..+.+.+... ....+++++||||||.++..++..+...+ ++..++.
T Consensus 25 ~~~v~~~~~~g~~~~~~~---~~~~~~~~~~~~~~l~~~----~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~ 97 (212)
T smart00824 25 RRDVSALPLPGFGPGEPL---PASADALVEAQAEAVLRA----AGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVL 97 (212)
T ss_pred CccEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 589999999986432211 123333333333333322 23467899999999999999888765433 7888888
Q ss_pred cCCCCCC
Q psy4317 162 LDPAFPL 168 (235)
Q Consensus 162 ldPa~p~ 168 (235)
+|+..|.
T Consensus 98 ~~~~~~~ 104 (212)
T smart00824 98 LDTYPPG 104 (212)
T ss_pred EccCCCC
Confidence 8876654
No 146
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.30 E-value=0.0034 Score=51.13 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=73.9
Q ss_pred CCCCcEEEEEeCCCCCCCCCchH------HHHHHH---H--hcCCeEEEEEeCCCCCCC-Cchhh--hhcchHHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGT------TVKDAY---L--RRGDFNIILVDWSGLSAF-PWYTN--AATNTHIVGHFIA 115 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~------~l~~~l---l--~~~~~nVi~vD~~~~~~~-~~y~~--~~~~~~~v~~~l~ 115 (235)
+..+.+.+++.|-..+....+.. .+.... . ...+-.|-+|-|-++-.- ..... .....+.-+..|.
T Consensus 16 d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~ 95 (177)
T PF06259_consen 16 DTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLA 95 (177)
T ss_pred CCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHH
Confidence 45567899999987776543211 122111 1 012346777777764321 11111 1233566778899
Q ss_pred HHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 116 AFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 116 ~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
.|++-|....-+..++++||||.|+-+++.+++.... .+..++.+-.++-.
T Consensus 96 ~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--~vddvv~~GSPG~g 146 (177)
T PF06259_consen 96 RFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--RVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--CcccEEEECCCCCC
Confidence 9998887333456789999999999999999988332 89999888655433
No 147
>KOG3847|consensus
Probab=97.27 E-value=0.00094 Score=58.66 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=32.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLS 95 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~ 95 (235)
+.+-|++||-||..++.+ .+..+--.+..+ ||-|.++..|-.+
T Consensus 115 ~~k~PvvvFSHGLggsRt--~YSa~c~~LASh-G~VVaavEHRD~S 157 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRT--LYSAYCTSLASH-GFVVAAVEHRDRS 157 (399)
T ss_pred CCCccEEEEecccccchh--hHHHHhhhHhhC-ceEEEEeecccCc
Confidence 446789999999999987 345555556555 7999999988643
No 148
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.24 E-value=0.0014 Score=60.07 Aligned_cols=101 Identities=16% Similarity=0.176 Sum_probs=67.0
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEE
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMH 132 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~ 132 (235)
+|+|+++--+.+.... ..+.+++.++. |+.|+++||..... ........++++..+.|.++++.+ ..+ +|
T Consensus 102 ~~pvLiV~Pl~g~~~~-L~RS~V~~Ll~--g~dVYl~DW~~p~~-vp~~~~~f~ldDYi~~l~~~i~~~-----G~~-v~ 171 (406)
T TIGR01849 102 GPAVLIVAPMSGHYAT-LLRSTVEALLP--DHDVYITDWVNARM-VPLSAGKFDLEDYIDYLIEFIRFL-----GPD-IH 171 (406)
T ss_pred CCcEEEEcCCchHHHH-HHHHHHHHHhC--CCcEEEEeCCCCCC-CchhcCCCCHHHHHHHHHHHHHHh-----CCC-Cc
Confidence 3789999888855432 34666776665 69999999998653 111222334444335666666654 334 99
Q ss_pred EEEechhhHHHHHHHHhcCCCC---CCCcccccC
Q psy4317 133 VIGFSLGAEIAGFTGKALGTVD---KLPRITGLD 163 (235)
Q Consensus 133 lIGHSlGa~va~~~a~~~~~~g---~v~rI~~ld 163 (235)
++|+++||-.+..++..+.+.+ +++.+|++.
T Consensus 172 l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~ 205 (406)
T TIGR01849 172 VIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMG 205 (406)
T ss_pred EEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEe
Confidence 9999999999876666653321 688988763
No 149
>KOG4840|consensus
Probab=97.23 E-value=0.0016 Score=54.75 Aligned_cols=110 Identities=14% Similarity=0.143 Sum_probs=69.8
Q ss_pred CCCCcEEEEEeCCCCCCCC-CchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANG-ESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPL 128 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~-~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~ 128 (235)
+..+..||||-|.++.--. .+...+.. ++.+.+|.++-+-.+..-. .| .....++-+++|..+++++...+..
T Consensus 33 gv~~~~vvfiGGLgdgLl~~~y~~~L~~-~lde~~wslVq~q~~Ssy~--G~--Gt~slk~D~edl~~l~~Hi~~~~fS- 106 (299)
T KOG4840|consen 33 GVESVKVVFIGGLGDGLLICLYTTMLNR-YLDENSWSLVQPQLRSSYN--GY--GTFSLKDDVEDLKCLLEHIQLCGFS- 106 (299)
T ss_pred CceEEEEEEEcccCCCccccccHHHHHH-HHhhccceeeeeecccccc--cc--ccccccccHHHHHHHHHHhhccCcc-
Confidence 4456679999998765432 34555554 4555579888887664211 12 2234555567899999988766654
Q ss_pred ccEEEEEechhhHHHHHHH-HhcCCCCCCCcccccCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTG-KALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a-~~~~~~g~v~rI~~ldPa~ 166 (235)
++|.|+|||-|.+-..++- +...+. +|..-++..|.+
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r-~iraaIlqApVS 144 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDR-KIRAAILQAPVS 144 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchH-HHHHHHHhCccc
Confidence 4999999999999887655 322221 454445555554
No 150
>KOG2565|consensus
Probab=97.20 E-value=0.0012 Score=59.12 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=64.8
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcC---------CeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHh
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRG---------DFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQS 123 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~---------~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~ 123 (235)
-.+++++|||.|+-.. ++ .+.+ +|... -|.||++..+|.+-+..-.....+...+|..+++++-+|
T Consensus 152 v~PlLl~HGwPGsv~E-Fy-kfIP-lLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL-- 226 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVRE-FY-KFIP-LLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL-- 226 (469)
T ss_pred ccceEEecCCCchHHH-HH-hhhh-hhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh--
Confidence 3479999999999873 44 3444 33322 289999999996542221223345556666666666655
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
..++..|=|---|+.|+..+|..+|+
T Consensus 227 ---g~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 227 ---GYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred ---CcceeEeecCchHHHHHHHHHhhcch
Confidence 56899999999999999999999887
No 151
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.17 E-value=0.0012 Score=55.83 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=60.4
Q ss_pred cCCccccccCCCCC--CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhh--cchHH-HHH
Q psy4317 38 AGHEMDLKMSHMNR--QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAA--TNTHI-VGH 112 (235)
Q Consensus 38 ~~~~~~i~~~~~~~--~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~--~~~~~-v~~ 112 (235)
..|-.++.-..|.. +.+-.+++-|-.+-... +++.++.. +.+.||.|+.+||+|.+++..-.... ....+ .-.
T Consensus 12 ~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~-fYRrfA~~-a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~ 89 (281)
T COG4757 12 APDGYSLPGQRFPADGKASGRLVVAGATGVGQY-FYRRFAAA-AAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARL 89 (281)
T ss_pred cCCCccCccccccCCCCCCCcEEecccCCcchh-HhHHHHHH-hhccCceEEEEecccccCCCccccccCccchhhhhhc
Confidence 33333444444432 23334555554444432 45666654 45558999999999965532111000 11111 112
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 113 FIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 113 ~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
++...+..+.+. .+-...+.||||+|||+.+.++++
T Consensus 90 D~~aal~~~~~~-~~~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 90 DFPAALAALKKA-LPGHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred chHHHHHHHHhh-CCCCceEEeeccccceeecccccC
Confidence 455555555421 245678999999999999888776
No 152
>KOG3975|consensus
Probab=97.16 E-value=0.0035 Score=53.49 Aligned_cols=130 Identities=13% Similarity=0.064 Sum_probs=73.9
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCC--eEEEEEeCCCCCCCC---c-hhhhh-cchHHHHHHHHHHHHHH
Q psy4317 49 MNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGD--FNIILVDWSGLSAFP---W-YTNAA-TNTHIVGHFIAAFIRFL 121 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~--~nVi~vD~~~~~~~~---~-y~~~~-~~~~~v~~~l~~~l~~l 121 (235)
.+.+++.++.|.|=.|... ++..++..+..... ..|..+...+++..+ . -.+.. ...--...++..-++.+
T Consensus 25 ~~~~~~li~~IpGNPG~~g--FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFi 102 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLG--FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFI 102 (301)
T ss_pred CCCCceEEEEecCCCCchh--HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHH
Confidence 3567889999999888875 56666666654322 334555444433211 0 00000 00001112233333344
Q ss_pred HhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCCCCCCCCCCCc
Q psy4317 122 QSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYGFTGGEGHLSK 180 (235)
Q Consensus 122 ~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~~~~~~~~l~~ 180 (235)
.+.--...+++++|||.||.+...+.........|.+.++|=|...-....+.--++++
T Consensus 103 k~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~ 161 (301)
T KOG3975|consen 103 KEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTK 161 (301)
T ss_pred HHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeee
Confidence 33333457899999999999999887764332388898888777655554444444444
No 153
>KOG2541|consensus
Probab=97.12 E-value=0.0047 Score=53.16 Aligned_cols=104 Identities=9% Similarity=0.020 Sum_probs=63.0
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccE
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKM 131 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i 131 (235)
...++|+.||..++..+.-+..+.+.+....+.-|.++|.-.+.....+ ..+.+.++...+.+....+ -.+-+
T Consensus 22 s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l----~pl~~Qv~~~ce~v~~m~~---lsqGy 94 (296)
T KOG2541|consen 22 SPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSL----MPLWEQVDVACEKVKQMPE---LSQGY 94 (296)
T ss_pred ccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhh----ccHHHHHHHHHHHHhcchh---ccCce
Confidence 3356889999999887533344443333345788999998766321211 1222222222233332211 14568
Q ss_pred EEEEechhhHHHHHHHHhcCCCCCCCcccccC
Q psy4317 132 HVIGFSLGAEIAGFTGKALGTVDKLPRITGLD 163 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ld 163 (235)
++||.|-||.+|..++...++. .|...+-|.
T Consensus 95 nivg~SQGglv~Raliq~cd~p-pV~n~ISL~ 125 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNP-PVKNFISLG 125 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCC-CcceeEecc
Confidence 9999999999999999887654 676666553
No 154
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.09 E-value=0.0032 Score=57.43 Aligned_cols=105 Identities=11% Similarity=0.192 Sum_probs=67.9
Q ss_pred CCcEEEEEeCCCCCCCCC---chHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHH-HHHHHHHHHHHhcCCC
Q psy4317 52 QMTTVFYIHGFTEQANGE---SGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVG-HFIAAFIRFLQSKGFP 127 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~---~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~-~~l~~~l~~l~~~~~~ 127 (235)
.+++++++|=|.....-- ....++. ++-+.|..|.++||++-.. ..+..+.++.. ..+.+.++.+.+.. .
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~-~l~~~g~~vfvIsw~nPd~----~~~~~~~edYi~e~l~~aid~v~~it-g 179 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVR-WLLEQGLDVFVISWRNPDA----SLAAKNLEDYILEGLSEAIDTVKDIT-G 179 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHH-HHHHcCCceEEEeccCchH----hhhhccHHHHHHHHHHHHHHHHHHHh-C
Confidence 466799999988654210 1223443 3334589999999997432 12233333222 45555555544322 3
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCCCCCcccccC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLD 163 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ld 163 (235)
.++|++|||+.||.++..+..+++.. +|+.+|.+-
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lt 214 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLT 214 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhc-ccccceeee
Confidence 58999999999999999888887764 699998873
No 155
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.06 E-value=0.00081 Score=56.85 Aligned_cols=38 Identities=21% Similarity=0.361 Sum_probs=31.2
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCC--CCCCcccccCCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTV--DKLPRITGLDPAF 166 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~--g~v~rI~~ldPa~ 166 (235)
.++.+.|||+||.+|.+++....+. .+|.++...|.++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 4699999999999999999886542 2889998888754
No 156
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.04 E-value=0.0019 Score=56.10 Aligned_cols=106 Identities=11% Similarity=0.065 Sum_probs=48.1
Q ss_pred CcEEEEEeCCCCCCCCC-chHHHHHHHH--hcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 53 MTTVFYIHGFTEQANGE-SGTTVKDAYL--RRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~-~~~~l~~~ll--~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
..+||+.||.+++...+ -...+.+ +. ..+|.-|.+++............-..++....+.+.+.+...-+ + .+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~-~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~--L-~~ 80 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKE-LIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPE--L-AN 80 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHH-HHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG--G-TT
T ss_pred CCcEEEEEcCccccCChhHHHHHHH-HHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChh--h-hc
Confidence 34699999999875322 2233322 22 22577788888754321000000012233322333333332111 1 25
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLD 163 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ld 163 (235)
-+|+||||-||.++..+..+.+.. .|..++-|.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~-~V~nlISlg 113 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDP-PVHNLISLG 113 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS--EEEEEEES
T ss_pred ceeeeeeccccHHHHHHHHHCCCC-CceeEEEec
Confidence 699999999999999988887654 677776653
No 157
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.03 E-value=0.0015 Score=50.20 Aligned_cols=40 Identities=25% Similarity=0.333 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 112 HFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 112 ~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
..+.+.++.+.+.. +..+|.+.||||||.+|..++..+..
T Consensus 48 ~~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 48 DQILDALKELVEKY-PDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHhhhh
Confidence 34444444444322 34789999999999999988887654
No 158
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.03 E-value=0.0015 Score=56.35 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=73.2
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCC----Cchhhh----------------hcchHHH
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAF----PWYTNA----------------ATNTHIV 110 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~----~~y~~~----------------~~~~~~v 110 (235)
...|.||-.||++++.. .|...+ .+.. .||.|+++|-||-+.+ ..++.. ..-.+.+
T Consensus 81 ~~~P~vV~fhGY~g~~g-~~~~~l--~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v 156 (321)
T COG3458 81 GKLPAVVQFHGYGGRGG-EWHDML--HWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGV 156 (321)
T ss_pred CccceEEEEeeccCCCC-Cccccc--cccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeee
Confidence 56889999999999987 465444 2333 4799999999994332 122211 0112344
Q ss_pred HHHHHHHHHHHHhcC-CCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCC
Q psy4317 111 GHFIAAFIRFLQSKG-FPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFP 167 (235)
Q Consensus 111 ~~~l~~~l~~l~~~~-~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p 167 (235)
-.++.++++.+.+.. ++.++|-+-|-|-||.++..++..-+ +|++.+..=|-..
T Consensus 157 ~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~---rik~~~~~~Pfl~ 211 (321)
T COG3458 157 FLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP---RIKAVVADYPFLS 211 (321)
T ss_pred hHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh---hhhcccccccccc
Confidence 456666777665433 78899999999999999998877633 6777655545433
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.03 E-value=0.0027 Score=57.95 Aligned_cols=84 Identities=13% Similarity=0.113 Sum_probs=53.9
Q ss_pred hHHHHHHHHhc---CCeEEEE--EeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHH
Q psy4317 71 GTTVKDAYLRR---GDFNIIL--VDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGF 145 (235)
Q Consensus 71 ~~~l~~~ll~~---~~~nVi~--vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~ 145 (235)
+..+++.|.+. .+.++.+ .|||.... ........|.++|+...+.. -++|+||||||||.++.+
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~~~~--~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAYKKN--GKKVVLIAHSMGGLVARY 135 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCchHHHH
Confidence 45666666542 1333333 59986533 11233356777777765432 579999999999999988
Q ss_pred HHHhcCCC----CCCCcccccCCC
Q psy4317 146 TGKALGTV----DKLPRITGLDPA 165 (235)
Q Consensus 146 ~a~~~~~~----g~v~rI~~ldPa 165 (235)
+-+..+.. ..|++++.+.++
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCC
Confidence 77765321 179999988655
No 160
>KOG1516|consensus
Probab=96.95 E-value=0.0039 Score=59.02 Aligned_cols=95 Identities=16% Similarity=0.019 Sum_probs=52.8
Q ss_pred CcEEEEEeCCCCCCCC--CchHHHHHHHHhcCCeEEEEEeCCCCCC----CCchhhhhcchH--HHHHHHHHHHHHHHhc
Q psy4317 53 MTTVFYIHGFTEQANG--ESGTTVKDAYLRRGDFNIILVDWSGLSA----FPWYTNAATNTH--IVGHFIAAFIRFLQSK 124 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~--~~~~~l~~~ll~~~~~nVi~vD~~~~~~----~~~y~~~~~~~~--~v~~~l~~~l~~l~~~ 124 (235)
.|++|+|||-.-...+ .+........+...+.-|+.+.+|-+.- ..+- ....+.. +....|.++-+.+...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~-~~~gN~gl~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDS-AAPGNLGLFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCC-CCCCcccHHHHHHHHHHHHHHHHhc
Confidence 7999999993221111 1111111223333467888888886521 0100 0112322 2223343333444467
Q ss_pred CCCCccEEEEEechhhHHHHHHHH
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGK 148 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~ 148 (235)
|-++++|+|.|||.||..+..+..
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhc
Confidence 779999999999999999866443
No 161
>KOG3101|consensus
Probab=96.79 E-value=0.0011 Score=55.23 Aligned_cols=113 Identities=16% Similarity=0.193 Sum_probs=64.0
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCC-----CC---------Cchhhhh-----cchHHHH
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLS-----AF---------PWYTNAA-----TNTHIVG 111 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~-----~~---------~~y~~~~-----~~~~~v~ 111 (235)
+.-|+++++-|.+-+...-..+.-......+.+..|+.+|-+..+ +. ..|..+. .+.+...
T Consensus 42 k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 42 KRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred CcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 346899999999887754211111112234457888888876521 11 1122111 1122222
Q ss_pred HHHHHHHHHHHh--cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 112 HFIAAFIRFLQS--KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 112 ~~l~~~l~~l~~--~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
....++.+.+.+ ..+++.++-|.|||||||=|.-.+.+-+. +-+++.+..|.
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~--kykSvSAFAPI 175 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS--KYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc--cccceeccccc
Confidence 223344444442 23677899999999999987655544333 67777777664
No 162
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.67 E-value=0.0037 Score=52.50 Aligned_cols=38 Identities=24% Similarity=0.328 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcC
Q psy4317 113 FIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 113 ~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
.+...+..+.+. .+..++.+.||||||.+|..++..+.
T Consensus 113 ~~~~~~~~~~~~-~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 113 QVLPELKSALKQ-YPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHHHHHhh-CCCceEEEEccCHHHHHHHHHHHHHH
Confidence 344444433322 35678999999999999999888764
No 163
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.49 E-value=0.0055 Score=51.23 Aligned_cols=54 Identities=22% Similarity=0.406 Sum_probs=39.7
Q ss_pred HHHHHHHHHhc-CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCC
Q psy4317 114 IAAFIRFLQSK-GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYG 170 (235)
Q Consensus 114 l~~~l~~l~~~-~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~ 170 (235)
..+.+++|.+. .++.++|-|+|.|.||-+|..+|..++ .|+.++++.|+.-.+.
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~---~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP---QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS---SEEEEEEES--SB--S
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC---CccEEEEeCCceeEec
Confidence 45667777743 467789999999999999999999987 5899999888866655
No 164
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.43 E-value=0.0057 Score=53.32 Aligned_cols=105 Identities=11% Similarity=0.138 Sum_probs=66.2
Q ss_pred CCcEEEEEeCCCCCCCCCch-----HHHHHHHHhcCCeEEEEEeCCCCCCC-Cchhh--hhcchHHHHHHHHHHHHHHHh
Q psy4317 52 QMTTVFYIHGFTEQANGESG-----TTVKDAYLRRGDFNIILVDWSGLSAF-PWYTN--AATNTHIVGHFIAAFIRFLQS 123 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~-----~~l~~~ll~~~~~nVi~vD~~~~~~~-~~y~~--~~~~~~~v~~~l~~~l~~l~~ 123 (235)
++|++|=.|-.+-|..+-+. ..+. .++ ..+.|+=||.+|.... ...+. ...+++++|++|.++++++
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~-~i~--~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-- 96 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQ-EIL--QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-- 96 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHH-HHH--TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH--
T ss_pred CCceEEEeccccccchHHHHHHhcchhHH-HHh--hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC--
Confidence 68999999999988764221 2222 233 3699999999984321 12222 1356788999999999987
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
.++.++-+|--.||.|....|-.+|+ +|..++++.|..
T Consensus 97 ---~lk~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~ 134 (283)
T PF03096_consen 97 ---GLKSVIGFGVGAGANILARFALKHPE--RVLGLILVNPTC 134 (283)
T ss_dssp ---T---EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---
T ss_pred ---CccEEEEEeeccchhhhhhccccCcc--ceeEEEEEecCC
Confidence 56889999999999999999988888 899999988753
No 165
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.38 E-value=0.014 Score=51.15 Aligned_cols=72 Identities=19% Similarity=0.354 Sum_probs=46.5
Q ss_pred hHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH---h-cCCC-CccEEEEEechhhHHHHH
Q psy4317 71 GTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ---S-KGFP-LHKMHVIGFSLGAEIAGF 145 (235)
Q Consensus 71 ~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~---~-~~~~-~~~i~lIGHSlGa~va~~ 145 (235)
...+...+|++ ||.|++.||.|.+. .|... +..|..+.+.++... . .++. ..++.++|||-||+-++.
T Consensus 15 e~~~l~~~L~~-GyaVv~pDY~Glg~--~y~~~----~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~ 87 (290)
T PF03583_consen 15 EAPFLAAWLAR-GYAVVAPDYEGLGT--PYLNG----RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALW 87 (290)
T ss_pred HHHHHHHHHHC-CCEEEecCCCCCCC--cccCc----HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHH
Confidence 34455677877 79999999998654 35322 223333334443333 1 3443 368999999999999987
Q ss_pred HHHh
Q psy4317 146 TGKA 149 (235)
Q Consensus 146 ~a~~ 149 (235)
++..
T Consensus 88 AA~l 91 (290)
T PF03583_consen 88 AAEL 91 (290)
T ss_pred HHHH
Confidence 7754
No 166
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.34 E-value=0.0063 Score=53.21 Aligned_cols=111 Identities=7% Similarity=0.091 Sum_probs=65.4
Q ss_pred CCCCcEEEEEeC--CCCCCCCCchHHHHHHHHhc---CCeEEEEEeCCCCCC-CCchhhhhcchHHHHHHHHHHHHHHHh
Q psy4317 50 NRQMTTVFYIHG--FTEQANGESGTTVKDAYLRR---GDFNIILVDWSGLSA-FPWYTNAATNTHIVGHFIAAFIRFLQS 123 (235)
Q Consensus 50 ~~~~p~vi~iHG--~~~s~~~~~~~~l~~~ll~~---~~~nVi~vD~~~~~~-~~~y~~~~~~~~~v~~~l~~~l~~l~~ 123 (235)
..+.|++++.|| |..+.. .. .+.+++... ....+|.+|+-.-.. ...|.......+.+++.|-=+++.-..
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~--i~-~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGR--IP-RILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred cccccEEEEeccHHHHhcCC--hH-HHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCc
Confidence 346889999999 444433 22 334455443 247888888754211 011222222334444444333332211
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
.-...+.-.|+|-||||-++.++|..+++ .+++|....|.
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps 211 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGS 211 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCc
Confidence 11234566799999999999999999998 78888766554
No 167
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=96.34 E-value=0.04 Score=47.13 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=56.3
Q ss_pred cccCCCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCC-CC-CCchhhhhcchHHHHHHHHHHHHHH
Q psy4317 44 LKMSHMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGL-SA-FPWYTNAATNTHIVGHFIAAFIRFL 121 (235)
Q Consensus 44 i~~~~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~-~~-~~~y~~~~~~~~~v~~~l~~~l~~l 121 (235)
.+.......+++|++..||...-. -+..++. |+...||+|+..|-..+ +. +... ....+..-.++|..++++|
T Consensus 21 ~P~~~~~~~~~tiliA~Gf~rrmd--h~agLA~-YL~~NGFhViRyDsl~HvGlSsG~I--~eftms~g~~sL~~V~dwl 95 (294)
T PF02273_consen 21 RPKNNEPKRNNTILIAPGFARRMD--HFAGLAE-YLSANGFHVIRYDSLNHVGLSSGDI--NEFTMSIGKASLLTVIDWL 95 (294)
T ss_dssp ---TTS---S-EEEEE-TT-GGGG--GGHHHHH-HHHTTT--EEEE---B---------------HHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEecchhHHHH--HHHHHHH-HHhhCCeEEEeccccccccCCCCCh--hhcchHHhHHHHHHHHHHH
Confidence 344445566799999999997765 3556764 66666899999997763 11 1111 1123334446788888998
Q ss_pred HhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 122 QSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 122 ~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
.+.| ..++-||.-||-|.||..++...
T Consensus 96 ~~~g--~~~~GLIAaSLSaRIAy~Va~~i 122 (294)
T PF02273_consen 96 ATRG--IRRIGLIAASLSARIAYEVAADI 122 (294)
T ss_dssp HHTT-----EEEEEETTHHHHHHHHTTTS
T ss_pred HhcC--CCcchhhhhhhhHHHHHHHhhcc
Confidence 8655 57899999999999999998875
No 168
>KOG2931|consensus
Probab=96.32 E-value=0.023 Score=49.70 Aligned_cols=106 Identities=11% Similarity=0.117 Sum_probs=77.4
Q ss_pred CCCCcEEEEEeCCCCCCCCCc-----hHHHHHHHHhcCCeEEEEEeCCCCCCC-Cchhhh--hcchHHHHHHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGES-----GTTVKDAYLRRGDFNIILVDWSGLSAF-PWYTNA--ATNTHIVGHFIAAFIRFL 121 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~-----~~~l~~~ll~~~~~nVi~vD~~~~~~~-~~y~~~--~~~~~~v~~~l~~~l~~l 121 (235)
+.++|.+|=.|...-+..+-+ ...++ .++. .+.|+-||-+|.... ..++.. ..+++.+|++|-.+++++
T Consensus 43 ~~~kpaiiTyhDlglN~~scFq~ff~~p~m~-ei~~--~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f 119 (326)
T KOG2931|consen 43 KGNKPAIITYHDLGLNHKSCFQGFFNFPDMA-EILE--HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF 119 (326)
T ss_pred CCCCceEEEecccccchHhHhHHhhcCHhHH-HHHh--heEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 346888888999888876532 23333 3443 499999999984221 112211 346788888888888876
Q ss_pred HhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 122 QSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 122 ~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
..+.|+-+|--.||.|....|...|+ +|..|+++++.
T Consensus 120 -----~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~ 156 (326)
T KOG2931|consen 120 -----GLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCD 156 (326)
T ss_pred -----CcceEEEecccccHHHHHHHHhcChh--heeEEEEEecC
Confidence 67889999999999999998988888 89999988654
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=96.24 E-value=0.023 Score=50.45 Aligned_cols=30 Identities=13% Similarity=0.036 Sum_probs=23.7
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccc
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITG 161 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ 161 (235)
+.-|+||||||+=|..+|.+.++ +.+.+..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS 182 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPD--RFKSASS 182 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcc--hhceecc
Confidence 67899999999999998888765 4444443
No 170
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.20 E-value=0.014 Score=48.59 Aligned_cols=112 Identities=18% Similarity=0.301 Sum_probs=48.2
Q ss_pred CCcEEEEEeCCCCCCCCCch---HHHHHHHHhcCCeEEEEEeCCCCC-C---CC---------------chh--hh---h
Q psy4317 52 QMTTVFYIHGFTEQANGESG---TTVKDAYLRRGDFNIILVDWSGLS-A---FP---------------WYT--NA---A 104 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~---~~l~~~ll~~~~~nVi~vD~~~~~-~---~~---------------~y~--~~---~ 104 (235)
.++.|+.+|||..|..- +. ..+.+. +...++..+.+|-+--. . .. .|. .. .
T Consensus 3 ~k~riLcLHG~~~na~i-f~~q~~~l~~~-l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEI-FRQQTSALRKA-LKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--HHH-HHHHTHHHHHH-HHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCHHH-HHHHHHHHHHH-HhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 57889999999999752 22 233333 33225889999876522 0 00 010 00 0
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCC-----CC-CCCcccccCCCCCC
Q psy4317 105 TNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGT-----VD-KLPRITGLDPAFPL 168 (235)
Q Consensus 105 ~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~-----~g-~v~rI~~ldPa~p~ 168 (235)
.....+.+.+..+.+.+.+.| + =.-|+|||.||.+|..++..... .. .++-++.+....|.
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~G-P--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENG-P--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred ccccCHHHHHHHHHHHHHhcC-C--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 112333444555555554444 1 13699999999999877654321 01 46666777655554
No 171
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.18 E-value=0.052 Score=44.20 Aligned_cols=104 Identities=16% Similarity=0.182 Sum_probs=51.3
Q ss_pred EEEEEeCCCCCCCCCch-HHHHHHHHhcC---CeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 55 TVFYIHGFTEQANGESG-TTVKDAYLRRG---DFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~-~~l~~~ll~~~---~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
.||+..|........+. ..+.+.+.+.. ...+..|+|+.......|..++ ..=...+.++|+..... .+-.+
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~---~~G~~~~~~~i~~~~~~-CP~~k 82 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSV---AAGVANLVRLIEEYAAR-CPNTK 82 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHH---HHHHHHHHHHHHHHHHH-STTSE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccH---HHHHHHHHHHHHHHHHh-CCCCC
Confidence 47778887765543332 22333332222 3667778888754312354332 11122334444333211 35679
Q ss_pred EEEEEechhhHHHHHHHHh--cCCC--CCCCccccc
Q psy4317 131 MHVIGFSLGAEIAGFTGKA--LGTV--DKLPRITGL 162 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~--~~~~--g~v~rI~~l 162 (235)
|.|+|+|.||+|+..+... ++.. .+|..++++
T Consensus 83 ivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlf 118 (179)
T PF01083_consen 83 IVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLF 118 (179)
T ss_dssp EEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEE
T ss_pred EEEEecccccHHHHHHHHhccCChhhhhhEEEEEEe
Confidence 9999999999999988776 3221 156555554
No 172
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.11 E-value=0.031 Score=55.42 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=54.7
Q ss_pred HHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhc---------------CCCCccEEEEEechhhHH
Q psy4317 78 YLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSK---------------GFPLHKMHVIGFSLGAEI 142 (235)
Q Consensus 78 ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~---------------~~~~~~i~lIGHSlGa~v 142 (235)
++...||.|+.+|.+|...+...... .. ..-.++..++|++|... .-...+|-++|.|+||.+
T Consensus 274 ~~~~rGYaVV~~D~RGtg~SeG~~~~-~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 274 YFLPRGFAVVYVSGIGTRGSDGCPTT-GD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHhCCeEEEEEcCCCCCCCCCcCcc-CC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 34444899999999995443322111 11 22345677778887621 112469999999999999
Q ss_pred HHHHHHhcCCCCCCCcccccCCC
Q psy4317 143 AGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 143 a~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+..+|...++ .++.|+...+.
T Consensus 352 ~~~aAa~~pp--~LkAIVp~a~i 372 (767)
T PRK05371 352 PNAVATTGVE--GLETIIPEAAI 372 (767)
T ss_pred HHHHHhhCCC--cceEEEeeCCC
Confidence 9988887555 57777665443
No 173
>PLN02408 phospholipase A1
Probab=96.04 E-value=0.0087 Score=54.03 Aligned_cols=24 Identities=33% Similarity=0.498 Sum_probs=20.7
Q ss_pred ccEEEEEechhhHHHHHHHHhcCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
-+|++.||||||.+|..+|..+..
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 369999999999999998887654
No 174
>KOG1553|consensus
Probab=96.01 E-value=0.028 Score=50.26 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=61.3
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC--chhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP--WYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
++..||..-|-.|-..-.-+ ..-++. +|.|+-.+.+|.+.+. .|+. +....++.+.++..+ ..|+..+
T Consensus 242 gq~LvIC~EGNAGFYEvG~m----~tP~~l-gYsvLGwNhPGFagSTG~P~p~---n~~nA~DaVvQfAI~--~Lgf~~e 311 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEVGVM----NTPAQL-GYSVLGWNHPGFAGSTGLPYPV---NTLNAADAVVQFAIQ--VLGFRQE 311 (517)
T ss_pred CceEEEEecCCccceEeeee----cChHHh-CceeeccCCCCccccCCCCCcc---cchHHHHHHHHHHHH--HcCCCcc
Confidence 45667777775554332111 111232 7999999999965533 3432 222222223333221 3578899
Q ss_pred cEEEEEechhhHHHHHHHHhcCCCCCCCcccccCC
Q psy4317 130 KMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDP 164 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldP 164 (235)
+|+|.|.|.||.-+.++|..+|+ |+.+ .||.
T Consensus 312 dIilygWSIGGF~~~waAs~YPd---Vkav-vLDA 342 (517)
T KOG1553|consen 312 DIILYGWSIGGFPVAWAASNYPD---VKAV-VLDA 342 (517)
T ss_pred ceEEEEeecCCchHHHHhhcCCC---ceEE-Eeec
Confidence 99999999999999999999986 5554 4444
No 175
>KOG4372|consensus
Probab=95.84 E-value=0.0044 Score=56.18 Aligned_cols=91 Identities=16% Similarity=0.202 Sum_probs=52.8
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHH-HHHHhcCCCCccE
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFI-RFLQSKGFPLHKM 131 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l-~~l~~~~~~~~~i 131 (235)
.-.||++||..+.....|...+........+..++..+..+. +.+....++.+|..+++.+ +.+.. .+.++|
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~-----~~~T~~Gv~~lG~Rla~~~~e~~~~--~si~kI 152 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNN-----MCQTFDGVDVLGERLAEEVKETLYD--YSIEKI 152 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccc-----hhhccccceeeecccHHHHhhhhhc--ccccee
Confidence 348999999888222224444433333334554554444432 2233344556666666653 33321 246899
Q ss_pred EEEEechhhHHHHHHHHhc
Q psy4317 132 HVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~ 150 (235)
-+|||||||-++.++-.++
T Consensus 153 SfvghSLGGLvar~AIgyl 171 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIGYL 171 (405)
T ss_pred eeeeeecCCeeeeEEEEee
Confidence 9999999999987755443
No 176
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.75 E-value=0.022 Score=51.19 Aligned_cols=59 Identities=15% Similarity=0.226 Sum_probs=39.2
Q ss_pred chHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCC---CCCCcccccCCCCC
Q psy4317 106 NTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTV---DKLPRITGLDPAFP 167 (235)
Q Consensus 106 ~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~---g~v~rI~~ldPa~p 167 (235)
..+..+..|++.+.. ......+|+||||||||.+..+.-..+.+. +.|..++++-.+.+
T Consensus 200 rA~~aG~~LA~~L~~---~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 200 RAEKAGKVLADALLS---RNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHHHHHHHHHHH---hcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 344566666665543 223445799999999999988776666543 26888888854333
No 177
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.72 E-value=0.093 Score=47.54 Aligned_cols=95 Identities=11% Similarity=0.082 Sum_probs=56.9
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHH-------------------HHHHhcCCeEEEEEeCCCCCCCCchhhh----hcch
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVK-------------------DAYLRRGDFNIILVDWSGLSAFPWYTNA----ATNT 107 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~-------------------~~ll~~~~~nVi~vD~~~~~~~~~y~~~----~~~~ 107 (235)
.++|++|++.|-.|.++. + -.+. ..+.+ ..|++.||.+-+.. -.|... ..+.
T Consensus 38 ~~~Pl~~wlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~l~~n~~sW~~--~an~l~iD~PvGtG-fS~~~~~~~~~~~~ 112 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSM-W-GLFGENGPFRINPDGPYTLEDNPYSWNK--FANLLFIDQPVGTG-FSYGNDPSDYVWND 112 (415)
T ss_dssp CSS-EEEEEE-TTTB-TH-H-HHHCTTSSEEEETTSTSEEEE-TT-GGG--TSEEEEE--STTST-T-EESSGGGGS-SH
T ss_pred CCccEEEEecCCceeccc-c-ccccccCceEEeeccccccccccccccc--ccceEEEeecCceE-Eeeccccccccchh
Confidence 457888888888776642 1 0000 01222 48999999887544 223221 2367
Q ss_pred HHHHHHHHHHHHHHH-hcC-CCCccEEEEEechhhHHHHHHHHhc
Q psy4317 108 HIVGHFIAAFIRFLQ-SKG-FPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 108 ~~v~~~l~~~l~~l~-~~~-~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+.+++++.++|+.+. +.. +...+++|.|-|.||+-+-.+|..+
T Consensus 113 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i 157 (415)
T PF00450_consen 113 DQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYI 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhh
Confidence 888899988887665 322 3456899999999999877766653
No 178
>KOG2281|consensus
Probab=95.66 E-value=0.064 Score=51.51 Aligned_cols=101 Identities=12% Similarity=0.123 Sum_probs=64.9
Q ss_pred CCCCCCcEEEEEeCCCCC----CCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhhhh-c-----chHHHHHHHHH
Q psy4317 48 HMNRQMTTVFYIHGFTEQ----ANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTNAA-T-----NTHIVGHFIAA 116 (235)
Q Consensus 48 ~~~~~~p~vi~iHG~~~s----~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~~~-~-----~~~~v~~~l~~ 116 (235)
.+.++-|||++|=|-.+- .+..|..++.-..|+..||.|+.+|-||.+... .+-.+. . .+++.. +
T Consensus 637 ~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQV----e 712 (867)
T KOG2281|consen 637 QPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQV----E 712 (867)
T ss_pred CCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhH----H
Confidence 345667899999996552 122355566555666678999999999865421 121111 1 122221 2
Q ss_pred HHHHHH-hcC-CCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 117 FIRFLQ-SKG-FPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 117 ~l~~l~-~~~-~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
-++.|. +.| +++++|.|-|.|.||.++.++-.++|+
T Consensus 713 glq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 713 GLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred HHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 233333 334 689999999999999999988887775
No 179
>PLN02454 triacylglycerol lipase
Probab=95.63 E-value=0.021 Score=52.33 Aligned_cols=39 Identities=23% Similarity=0.212 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCCCc--cEEEEEechhhHHHHHHHHhcC
Q psy4317 112 HFIAAFIRFLQSKGFPLH--KMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 112 ~~l~~~l~~l~~~~~~~~--~i~lIGHSlGa~va~~~a~~~~ 151 (235)
+++...|+.+.+.. +.+ +|++.||||||.+|..+|..+.
T Consensus 210 ~qvl~~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLaA~di~ 250 (414)
T PLN02454 210 SQLLAKIKELLERY-KDEKLSIVLTGHSLGASLATLAAFDIV 250 (414)
T ss_pred HHHHHHHHHHHHhC-CCCCceEEEEecCHHHHHHHHHHHHHH
Confidence 34445555554321 233 4999999999999999887653
No 180
>PLN02571 triacylglycerol lipase
Probab=95.43 E-value=0.021 Score=52.39 Aligned_cols=21 Identities=29% Similarity=0.539 Sum_probs=19.1
Q ss_pred cEEEEEechhhHHHHHHHHhc
Q psy4317 130 KMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~ 150 (235)
+|++.||||||.+|..+|..+
T Consensus 227 sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDI 247 (413)
T ss_pred cEEEeccchHHHHHHHHHHHH
Confidence 689999999999999988775
No 181
>PLN02310 triacylglycerol lipase
Probab=95.43 E-value=0.015 Score=53.14 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=19.9
Q ss_pred ccEEEEEechhhHHHHHHHHhcC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
.+|+|.||||||.+|..+|..+.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHH
Confidence 47999999999999998887653
No 182
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.41 E-value=0.07 Score=51.30 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=79.9
Q ss_pred CCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCC--Cchhhhhcch-HHHHHHHHHHHHHHHhcC
Q psy4317 49 MNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAF--PWYTNAATNT-HIVGHFIAAFIRFLQSKG 125 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~--~~y~~~~~~~-~~v~~~l~~~l~~l~~~~ 125 (235)
.+.+.|.+++.=|-=|....+++....-.|+.+ |+-....--||++.. ..|..+..-- ..--.+..+..+.|.+.+
T Consensus 444 ~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g 522 (682)
T COG1770 444 LDGSAPLLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEG 522 (682)
T ss_pred CCCCCcEEEEEeccccccCCcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcC
Confidence 456677777777733333334444434467787 687777777776542 2332221000 000123334456666556
Q ss_pred C-CCccEEEEEechhhHHHHHHHHhcCCCCCCCccc-----------ccCCCCCCCCCCCCCCCCCccCCCeeEEEee
Q psy4317 126 F-PLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRIT-----------GLDPAFPLYGFTGGEGHLSKEDADFVDVIHT 191 (235)
Q Consensus 126 ~-~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~-----------~ldPa~p~f~~~~~~~~l~~~dA~~v~viht 191 (235)
+ ..+++.++|=|.||+++|.++..-|+ ..+.|+ .|||.-|+-.. .-.+.=++.|+++-+.|.+
T Consensus 523 ~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvltTMlD~slPLT~~-E~~EWGNP~d~e~y~yikS 597 (682)
T COG1770 523 YTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLTTMLDPSLPLTVT-EWDEWGNPLDPEYYDYIKS 597 (682)
T ss_pred cCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhhhhcCCCCCCCcc-chhhhCCcCCHHHHHHHhh
Confidence 4 56799999999999999999999877 455554 46777777543 1223333444444444433
No 183
>PLN02802 triacylglycerol lipase
Probab=95.38 E-value=0.019 Score=53.66 Aligned_cols=24 Identities=38% Similarity=0.497 Sum_probs=20.7
Q ss_pred ccEEEEEechhhHHHHHHHHhcCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
-+|+|.||||||.+|..+|..+..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~ 353 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELAT 353 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 379999999999999998887643
No 184
>KOG2100|consensus
Probab=95.37 E-value=0.066 Score=53.07 Aligned_cols=112 Identities=11% Similarity=0.041 Sum_probs=63.9
Q ss_pred CCcEEEEEeCCCCCCCC--CchHHHHHHHHhcCCeEEEEEeCCCCCC-CCchhhhh-cch--HHHHHHHHHHHHHHHh-c
Q psy4317 52 QMTTVFYIHGFTEQANG--ESGTTVKDAYLRRGDFNIILVDWSGLSA-FPWYTNAA-TNT--HIVGHFIAAFIRFLQS-K 124 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~--~~~~~l~~~ll~~~~~nVi~vD~~~~~~-~~~y~~~~-~~~--~~v~~~l~~~l~~l~~-~ 124 (235)
+-|.++.+||-.++... .+............++-|+.+|.||.+. ...+..+. .+. .++ ++....++.+.+ .
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev-~D~~~~~~~~~~~~ 603 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEV-KDQIEAVKKVLKLP 603 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcch-HHHHHHHHHHHhcc
Confidence 45678889998864321 1222222223344589999999999433 22222211 111 111 223333333332 2
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcc-cccCCCC
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRI-TGLDPAF 166 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI-~~ldPa~ 166 (235)
-+|.++|.|.|+|.||.++..+...-+. .+-+- +++.|..
T Consensus 604 ~iD~~ri~i~GwSyGGy~t~~~l~~~~~--~~fkcgvavaPVt 644 (755)
T KOG2100|consen 604 FIDRSRVAIWGWSYGGYLTLKLLESDPG--DVFKCGVAVAPVT 644 (755)
T ss_pred cccHHHeEEeccChHHHHHHHHhhhCcC--ceEEEEEEeccee
Confidence 4799999999999999999887776543 33333 5666653
No 185
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.27 E-value=0.018 Score=54.01 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=19.7
Q ss_pred ccEEEEEechhhHHHHHHHHhcC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
-+|+|.||||||.+|..+|..+.
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHH
Confidence 47999999999999998886653
No 186
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.22 E-value=0.12 Score=47.71 Aligned_cols=117 Identities=12% Similarity=0.042 Sum_probs=64.5
Q ss_pred CCCCCcEEEEEeCCCCCCCCCch-HHHHHHHHhcCCeEEEEEeCCCCCCCCchhh------hhcchHHHHHHHHHHHHHH
Q psy4317 49 MNRQMTTVFYIHGFTEQANGESG-TTVKDAYLRRGDFNIILVDWSGLSAFPWYTN------AATNTHIVGHFIAAFIRFL 121 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~~~~~-~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~------~~~~~~~v~~~l~~~l~~l 121 (235)
+.++.|++|++ |--+..+..+. ..+...+.++-+.-||++..|-.+++..+.. ...++++.-+|++.|++.+
T Consensus 25 ~~~~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 25 YKPGGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp --TTSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 45556655555 43333321121 1122334444578899999999776543322 1135677778899999888
Q ss_pred H-hc-CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCC
Q psy4317 122 Q-SK-GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYG 170 (235)
Q Consensus 122 ~-~~-~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~ 170 (235)
. +. ..+..+++++|=|.||.+|+++-..+|. .+.. ++..++|+..
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~g--a~ASSapv~a 150 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDG--AWASSAPVQA 150 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SE--EEEET--CCH
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEE--EEeccceeee
Confidence 7 33 2344689999999999999999999987 3443 3334455443
No 187
>KOG3967|consensus
Probab=95.21 E-value=0.11 Score=43.64 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=62.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHH---------------HHHHHHhcCCeEEEEEeCCCCCC-------CCchhhhhcch
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTT---------------VKDAYLRRGDFNIILVDWSGLSA-------FPWYTNAATNT 107 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~---------------l~~~ll~~~~~nVi~vD~~~~~~-------~~~y~~~~~~~ 107 (235)
...++.+|+|||-+--....|.+. +..+ .+.||-||+++-..... ...|.. ..+
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rA--v~~Gygviv~N~N~~~kfye~k~np~kyir--t~v 173 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRA--VAEGYGVIVLNPNRERKFYEKKRNPQKYIR--TPV 173 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHH--HHcCCcEEEeCCchhhhhhhcccCcchhcc--chH
Confidence 345678999999554433334432 2222 23479999998663211 112221 111
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 108 HIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 108 ~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+. +..+ + ..+. .-...+++.+|.||.||.....+-.+++...+|..|.+-|.+
T Consensus 174 eh-~~yv--w-~~~v-~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 174 EH-AKYV--W-KNIV-LPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HH-HHHH--H-HHHh-cccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 11 1111 1 1221 123578999999999999999888887754478888777776
No 188
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.20 E-value=0.062 Score=48.92 Aligned_cols=82 Identities=21% Similarity=0.333 Sum_probs=59.9
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH-hcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 72 TTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ-SKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 72 ~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~-~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+.+.++ |++.|+.|+-+| +..|.....+-+.++.++.+++++.. +. ...++.|||+|.||-|.=++-+++
T Consensus 277 k~v~~~-l~~~gvpVvGvd------sLRYfW~~rtPe~~a~Dl~r~i~~y~~~w--~~~~~~liGySfGADvlP~~~n~L 347 (456)
T COG3946 277 KEVAEA-LQKQGVPVVGVD------SLRYFWSERTPEQIAADLSRLIRFYARRW--GAKRVLLIGYSFGADVLPFAYNRL 347 (456)
T ss_pred HHHHHH-HHHCCCceeeee------hhhhhhccCCHHHHHHHHHHHHHHHHHhh--CcceEEEEeecccchhhHHHHHhC
Confidence 455554 555689999998 25677777777899999999998876 34 457999999999999987777777
Q ss_pred CCCC--CCCccccc
Q psy4317 151 GTVD--KLPRITGL 162 (235)
Q Consensus 151 ~~~g--~v~rI~~l 162 (235)
+... +|..+.+|
T Consensus 348 ~~~~r~~v~~~~ll 361 (456)
T COG3946 348 PPATRQRVRMVSLL 361 (456)
T ss_pred CHHHHHHHHHHHHH
Confidence 6521 44444443
No 189
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.14 E-value=0.28 Score=42.04 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=51.0
Q ss_pred EEEEEeC-CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHh-cCCCCc--c
Q psy4317 55 TVFYIHG-FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQS-KGFPLH--K 130 (235)
Q Consensus 55 ~vi~iHG-~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~-~~~~~~--~ 130 (235)
+|=||=| |-++.=...++.+.+.+.++ ||.||+.=|...-+ ... -.+.+-+.....++.|.+ .++... .
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~-Gy~ViAtPy~~tfD--H~~----~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADR-GYAVIATPYVVTFD--HQA----IAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhC-CcEEEEEecCCCCc--HHH----HHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 4555656 44443222556676666655 79999987765322 111 122333334444445542 233322 5
Q ss_pred EEEEEechhhHHHHHHHHhcC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~ 151 (235)
++=||||||+-+-..++..+.
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred eeeeecccchHHHHHHhhhcc
Confidence 677999999988877776653
No 190
>PLN00413 triacylglycerol lipase
Probab=95.11 E-value=0.029 Score=52.12 Aligned_cols=23 Identities=30% Similarity=0.401 Sum_probs=20.1
Q ss_pred CCccEEEEEechhhHHHHHHHHh
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+..++++.||||||.+|..+|..
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHH
Confidence 55689999999999999988864
No 191
>PLN02753 triacylglycerol lipase
Probab=95.02 E-value=0.032 Score=52.44 Aligned_cols=23 Identities=26% Similarity=0.351 Sum_probs=20.1
Q ss_pred CccEEEEEechhhHHHHHHHHhc
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
.-+|++.||||||.+|..+|..+
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 45899999999999999988765
No 192
>KOG4388|consensus
Probab=94.86 E-value=0.052 Score=51.54 Aligned_cols=91 Identities=18% Similarity=0.107 Sum_probs=57.3
Q ss_pred CcEEEEEeC--CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 53 MTTVFYIHG--FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 53 ~p~vi~iHG--~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
+-.|+=+|| |-...+......+ +.|.+.-+.-||.|||+-... ..++.+ ++++--...++|....-.|--.++
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YL-r~Wa~aL~cPiiSVdYSLAPE-aPFPRa---leEv~fAYcW~inn~allG~TgEr 470 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYL-RSWAQALGCPIISVDYSLAPE-APFPRA---LEEVFFAYCWAINNCALLGSTGER 470 (880)
T ss_pred ceEEEEecCCceeeeccccccHHH-HHHHHHhCCCeEEeeeccCCC-CCCCcH---HHHHHHHHHHHhcCHHHhCcccce
Confidence 335666888 3333332222333 345555589999999998766 445544 344444455666554445666799
Q ss_pred EEEEEechhhHHHHHHHH
Q psy4317 131 MHVIGFSLGAEIAGFTGK 148 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~ 148 (235)
|.++|-|.||.++.-++-
T Consensus 471 iv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 471 IVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred EEEeccCCCcceeehhHH
Confidence 999999999988654443
No 193
>PLN02324 triacylglycerol lipase
Probab=94.80 E-value=0.051 Score=49.84 Aligned_cols=21 Identities=29% Similarity=0.464 Sum_probs=19.0
Q ss_pred cEEEEEechhhHHHHHHHHhc
Q psy4317 130 KMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~~a~~~ 150 (235)
+|++.||||||.+|..+|..+
T Consensus 216 sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHH
Confidence 699999999999999988765
No 194
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=94.65 E-value=0.43 Score=43.66 Aligned_cols=44 Identities=20% Similarity=0.301 Sum_probs=29.8
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCC
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLS 95 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~ 95 (235)
.+-.|++|-||+++.+..+...+++.+.++-+..||.|+|.+..
T Consensus 34 ~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~ 77 (403)
T PF11144_consen 34 IKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFC 77 (403)
T ss_pred ceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeehee
Confidence 34479999999999997665566554444335666667887743
No 195
>PLN02162 triacylglycerol lipase
Probab=94.59 E-value=0.051 Score=50.48 Aligned_cols=24 Identities=29% Similarity=0.321 Sum_probs=20.0
Q ss_pred CCccEEEEEechhhHHHHHHHHhc
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+..++++.||||||.+|..+|..+
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHH
Confidence 456899999999999998876643
No 196
>KOG2385|consensus
Probab=94.54 E-value=0.03 Score=52.27 Aligned_cols=112 Identities=21% Similarity=0.229 Sum_probs=64.7
Q ss_pred hhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcC---CCCCCCcccccCCCCCCCCCCCCCCCC
Q psy4317 102 NAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALG---TVDKLPRITGLDPAFPLYGFTGGEGHL 178 (235)
Q Consensus 102 ~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~---~~g~v~rI~~ldPa~p~f~~~~~~~~l 178 (235)
-+.......|+.|++.+.. ..+....|+||||||||.+...--..+. +.+.|..++++..+.|. +. ...+
T Consensus 423 ia~dRa~kaG~lLAe~L~~---r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~-k~---~~w~ 495 (633)
T KOG2385|consen 423 IALDRADKAGELLAEALCK---RSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT-KA---KLWL 495 (633)
T ss_pred HHhhHHHHHHHHHHHHHHH---hccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC-CH---HHHH
Confidence 3444556677777766633 1235678999999999999764333332 22378888888654443 21 1112
Q ss_pred C---ccCCCeeEEEeeCCCCCCCcccccceeeecCCCCCCCCCCCc
Q psy4317 179 S---KEDADFVDVIHTDGGILGFPVPIGHADFFPNGGFPVQPGCHI 221 (235)
Q Consensus 179 ~---~~dA~~v~viht~~~~~G~~~~~g~~d~y~ngg~~~qpgC~~ 221 (235)
. --.-+||.+..++.=.+|+-...-..-|=.=+|. +||-|..
T Consensus 496 k~r~vVsGRFVNgYs~nDW~L~~lfRa~s~~~~avaGi-~~~~~i~ 540 (633)
T KOG2385|consen 496 KARSVVSGRFVNGYSTNDWTLGYLFRASSAQFGAVAGI-PQPICIP 540 (633)
T ss_pred HHHhheecceeeeeecchHHHHHHHHHhhcccccccCC-CccccCC
Confidence 2 1235788888777555565433333334333455 5888864
No 197
>PLN02847 triacylglycerol lipase
Probab=94.29 E-value=0.081 Score=50.52 Aligned_cols=25 Identities=32% Similarity=0.494 Sum_probs=21.5
Q ss_pred CCccEEEEEechhhHHHHHHHHhcC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
+.-++.|+||||||.+|..++..+.
T Consensus 249 PdYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHHh
Confidence 4468999999999999999888764
No 198
>PLN02719 triacylglycerol lipase
Probab=94.18 E-value=0.06 Score=50.54 Aligned_cols=23 Identities=26% Similarity=0.419 Sum_probs=20.0
Q ss_pred ccEEEEEechhhHHHHHHHHhcC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
-+|++.||||||.+|..+|..+.
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl~ 320 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDVA 320 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHHH
Confidence 47999999999999999887653
No 199
>PLN02934 triacylglycerol lipase
Probab=94.07 E-value=0.068 Score=50.13 Aligned_cols=24 Identities=33% Similarity=0.336 Sum_probs=20.4
Q ss_pred CCccEEEEEechhhHHHHHHHHhc
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+..++++.||||||.+|..++..+
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHHHH
Confidence 556899999999999999887653
No 200
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.86 E-value=0.39 Score=40.60 Aligned_cols=79 Identities=22% Similarity=0.242 Sum_probs=45.5
Q ss_pred CeEEEEEeCCCCC------CCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCC--
Q psy4317 83 DFNIILVDWSGLS------AFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVD-- 154 (235)
Q Consensus 83 ~~nVi~vD~~~~~------~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g-- 154 (235)
++++..|+|+..- ....|.. -+++-.+.+.+.+....-..++++++|+|.||.||..+.+++...+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~------Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~ 75 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDE------SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDP 75 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccch------HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCC
Confidence 5778888988721 1112221 1222233333333321125678999999999999998877764311
Q ss_pred ---CCCcccccCCCCC
Q psy4317 155 ---KLPRITGLDPAFP 167 (235)
Q Consensus 155 ---~v~rI~~ldPa~p 167 (235)
.+.-+..=||..|
T Consensus 76 ~~~~l~fVl~gnP~rp 91 (225)
T PF08237_consen 76 PPDDLSFVLIGNPRRP 91 (225)
T ss_pred CcCceEEEEecCCCCC
Confidence 3444445577655
No 201
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=93.82 E-value=0.24 Score=41.60 Aligned_cols=77 Identities=10% Similarity=0.253 Sum_probs=45.6
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEE-EEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNI-ILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nV-i~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
++..+||.-||+.+.+- +. .+....++.| ++.||+...-. . . +. ..++
T Consensus 10 ~~~LilfF~GWg~d~~~--f~----hL~~~~~~D~l~~yDYr~l~~d----------------~-~-~~-------~y~~ 58 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSP--FS----HLILPENYDVLICYDYRDLDFD----------------F-D-LS-------GYRE 58 (213)
T ss_pred CCeEEEEEecCCCChHH--hh----hccCCCCccEEEEecCcccccc----------------c-c-cc-------cCce
Confidence 45789999999988762 22 2211124444 44577643210 0 0 11 2478
Q ss_pred EEEEEechhhHHHHHHHHhcCCCCCCCcccccC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVDKLPRITGLD 163 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ld 163 (235)
|+||+.|||-.+|..+-+.. ++.+-++++
T Consensus 59 i~lvAWSmGVw~A~~~l~~~----~~~~aiAIN 87 (213)
T PF04301_consen 59 IYLVAWSMGVWAANRVLQGI----PFKRAIAIN 87 (213)
T ss_pred EEEEEEeHHHHHHHHHhccC----CcceeEEEE
Confidence 99999999999987765443 345555554
No 202
>PLN02761 lipase class 3 family protein
Probab=93.81 E-value=0.072 Score=50.10 Aligned_cols=23 Identities=30% Similarity=0.416 Sum_probs=19.9
Q ss_pred ccEEEEEechhhHHHHHHHHhcC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
-+|++.||||||.+|..+|..+.
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa 316 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIA 316 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHH
Confidence 47999999999999998887653
No 203
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=93.72 E-value=0.13 Score=44.40 Aligned_cols=40 Identities=20% Similarity=0.188 Sum_probs=33.0
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
...+.++..|+||||||-++..+....|+ .+++..+..|+
T Consensus 132 y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 132 YRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred cccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecch
Confidence 34677889999999999999999888776 68887777665
No 204
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=93.67 E-value=1.4 Score=41.69 Aligned_cols=117 Identities=16% Similarity=0.080 Sum_probs=75.8
Q ss_pred CCCCceeecCCccccccCCCCCCCcEEEEE-----eC--CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhh
Q psy4317 30 SHTPDILRAGHEMDLKMSHMNRQMTTVFYI-----HG--FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTN 102 (235)
Q Consensus 30 ~~~~~~i~~~~~~~i~~~~~~~~~p~vi~i-----HG--~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~ 102 (235)
|.++.++.+--+.. ...++.++++|+| || .+|-+. ...+.-+ +.. |.-|+.|.+.....
T Consensus 48 PvNYaLlrI~pp~~---~~~d~~krP~vViDPRAGHGpGIGGFK~---dSevG~A-L~~-GHPvYFV~F~p~P~------ 113 (581)
T PF11339_consen 48 PVNYALLRITPPEG---VPVDPTKRPFVVIDPRAGHGPGIGGFKP---DSEVGVA-LRA-GHPVYFVGFFPEPE------ 113 (581)
T ss_pred CcceeEEEeECCCC---CCCCCCCCCeEEeCCCCCCCCCccCCCc---ccHHHHH-HHc-CCCeEEEEecCCCC------
Confidence 44566666543333 2345666666666 55 333332 2344433 444 68888887765432
Q ss_pred hhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccccc
Q psy4317 103 AATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGL 162 (235)
Q Consensus 103 ~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~l 162 (235)
...++.+|....+.+++.+.+..-+..+..|||-.-||..+.++|...|+ +++-|+.-
T Consensus 114 pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvla 171 (581)
T PF11339_consen 114 PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLA 171 (581)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeec
Confidence 22456778888888998887544344489999999999999999999887 67777654
No 205
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.21 E-value=0.22 Score=41.55 Aligned_cols=68 Identities=10% Similarity=0.011 Sum_probs=36.3
Q ss_pred CeEEEEEeCCCCCCCCch----hhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 83 DFNIILVDWSGLSAFPWY----TNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 83 ~~nVi~vD~~~~~~~~~y----~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
-.||+++=||..+-.... .......+..-.++.+..+...+..-+...++|+|||-|+.+...+-+..
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 478888888864321101 01111111111233333333222222456899999999999998877663
No 206
>KOG2237|consensus
Probab=93.16 E-value=0.13 Score=49.36 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=62.7
Q ss_pred CCCCcEEEEEeC-CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhhhhcch--HHHHHHHHHHHHHHHhcC
Q psy4317 50 NRQMTTVFYIHG-FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTNAATNT--HIVGHFIAAFIRFLQSKG 125 (235)
Q Consensus 50 ~~~~p~vi~iHG-~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~~~~~~--~~v~~~l~~~l~~l~~~~ 125 (235)
+.++|.+++.|| |.-+-...|. .-...++++ |+.....|-||++... .|-....-+ ...-++...-.+.|.+.|
T Consensus 467 dg~~P~LLygYGay~isl~p~f~-~srl~lld~-G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g 544 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGISLDPSFR-ASRLSLLDR-GWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG 544 (712)
T ss_pred cCCCceEEEEecccceeeccccc-cceeEEEec-ceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC
Confidence 456787777777 4445443332 212235665 7888888999976521 121111111 111123444456676666
Q ss_pred -CCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 126 -FPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 126 -~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
..+++..+.|.|.||.+++.+..+.|+
T Consensus 545 yt~~~kL~i~G~SaGGlLvga~iN~rPd 572 (712)
T KOG2237|consen 545 YTQPSKLAIEGGSAGGLLVGACINQRPD 572 (712)
T ss_pred CCCccceeEecccCccchhHHHhccCch
Confidence 468899999999999999999998887
No 207
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=92.94 E-value=0.23 Score=47.62 Aligned_cols=71 Identities=13% Similarity=0.022 Sum_probs=40.6
Q ss_pred HHHHHHHHhc----CCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHH
Q psy4317 72 TTVKDAYLRR----GDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTG 147 (235)
Q Consensus 72 ~~l~~~ll~~----~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a 147 (235)
..+++.|... .+......|||...... . .-...-..|.++|+.+.+.. .-++|+|||||||+.++.+.-
T Consensus 159 ~kLIe~L~~iGY~~~nL~gAPYDWRls~~~l---e---~rd~YF~rLK~lIE~ay~~n-ggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 159 AVLIANLARIGYEEKNMYMAAYDWRLSFQNT---E---VRDQTLSRLKSNIELMVATN-GGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred HHHHHHHHHcCCCCCceeecccccccCccch---h---hhhHHHHHHHHHHHHHHHHc-CCCeEEEEEeCCchHHHHHHH
Confidence 4566665543 12344556887542200 0 00111234667777655321 247899999999999999765
Q ss_pred Hh
Q psy4317 148 KA 149 (235)
Q Consensus 148 ~~ 149 (235)
+.
T Consensus 232 ~w 233 (642)
T PLN02517 232 KW 233 (642)
T ss_pred Hh
Confidence 54
No 208
>KOG2369|consensus
Probab=92.31 E-value=0.21 Score=46.33 Aligned_cols=39 Identities=15% Similarity=0.012 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 113 FIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 113 ~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
.|++.|+...+. ..-++|.||+||||+.+..+.-+.++.
T Consensus 167 kLK~~iE~~~~~-~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 167 KLKKKIETMYKL-NGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHHHHH-cCCCceEEEecCCccHHHHHHHhcccc
Confidence 455555544322 134799999999999999887776554
No 209
>KOG2029|consensus
Probab=91.39 E-value=0.49 Score=45.25 Aligned_cols=64 Identities=17% Similarity=0.117 Sum_probs=40.9
Q ss_pred CCeEEEEEeCCCCCCC-CchhhhhcchHHHHHHHHHHHHHHHhcCCC-CccEEEEEechhhHHHHH
Q psy4317 82 GDFNIILVDWSGLSAF-PWYTNAATNTHIVGHFIAAFIRFLQSKGFP-LHKMHVIGFSLGAEIAGF 145 (235)
Q Consensus 82 ~~~nVi~vD~~~~~~~-~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~-~~~i~lIGHSlGa~va~~ 145 (235)
.+.+||.++|+..-.. ..|-.+....+.++....+++++|...++. -..|.-|||||||-.+-.
T Consensus 477 p~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~ 542 (697)
T KOG2029|consen 477 PKSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKK 542 (697)
T ss_pred ccceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHH
Confidence 4577888877752110 011112223345556677888888877765 678899999999977643
No 210
>KOG2183|consensus
Probab=91.37 E-value=1.7 Score=39.97 Aligned_cols=105 Identities=10% Similarity=0.052 Sum_probs=66.8
Q ss_pred cccCCCCCCCcEEEEEeCCCCCCC-----CCchHHHHHHHHhcCCeEEEEEeCCCCCCCCch-----hhh----hcchHH
Q psy4317 44 LKMSHMNRQMTTVFYIHGFTEQAN-----GESGTTVKDAYLRRGDFNIILVDWSGLSAFPWY-----TNA----ATNTHI 109 (235)
Q Consensus 44 i~~~~~~~~~p~vi~iHG~~~s~~-----~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y-----~~~----~~~~~~ 109 (235)
+.+..|.+++-+|+|.-|=-|+-. +.+..++++. .+.-+|.+..|-.+++..| ..+ ..+.++
T Consensus 71 in~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~----~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQ 146 (492)
T KOG2183|consen 71 INDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPE----LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQ 146 (492)
T ss_pred EecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHh----hCceEEEeehhccccCCCCcchhccChhhhccccHHH
Confidence 444556767577888877555432 1233344432 2566888899886654322 211 134455
Q ss_pred HHHHHHHHHHHHH-hcCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 110 VGHFIAAFIRFLQ-SKGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 110 v~~~l~~~l~~l~-~~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
.-.+.+++|..|. +.+.....|+.+|=|.||++|+.+-..+|-
T Consensus 147 ALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 147 ALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred HHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 5566777888887 444456789999999999999987777663
No 211
>KOG2551|consensus
Probab=91.09 E-value=0.67 Score=39.04 Aligned_cols=31 Identities=26% Similarity=0.593 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcC-CCCccEEEEEechhhHHHHHHHH
Q psy4317 114 IAAFIRFLQSKG-FPLHKMHVIGFSLGAEIAGFTGK 148 (235)
Q Consensus 114 l~~~l~~l~~~~-~~~~~i~lIGHSlGa~va~~~a~ 148 (235)
|.-+.+.+.+.| .| -|+|||-||.++++++.
T Consensus 92 l~yl~~~i~enGPFD----GllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFD----GLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHhCCCc----cccccchhHHHHHHhhc
Confidence 444445555555 33 48999999999998887
No 212
>KOG4569|consensus
Probab=90.71 E-value=0.2 Score=44.86 Aligned_cols=26 Identities=31% Similarity=0.436 Sum_probs=22.2
Q ss_pred CCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
+--+|.+-||||||.+|..+|..+-.
T Consensus 169 ~~~~i~vTGHSLGgAlA~laa~~i~~ 194 (336)
T KOG4569|consen 169 PNYSIWVTGHSLGGALASLAALDLVK 194 (336)
T ss_pred CCcEEEEecCChHHHHHHHHHHHHHH
Confidence 45689999999999999999888654
No 213
>KOG3253|consensus
Probab=90.04 E-value=0.98 Score=43.39 Aligned_cols=92 Identities=12% Similarity=0.116 Sum_probs=54.7
Q ss_pred CCCcEEEEEeCCC-CCCCCCchHHHHHHHHhc-CCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHH---hcC
Q psy4317 51 RQMTTVFYIHGFT-EQANGESGTTVKDAYLRR-GDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQ---SKG 125 (235)
Q Consensus 51 ~~~p~vi~iHG~~-~s~~~~~~~~l~~~ll~~-~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~---~~~ 125 (235)
+..|.+|++||-. ....++|+......+-.. +=..|..+|++..... .++...++.+..+..... ...
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhcc
Confidence 4678899999977 333333332222222111 1256777787764331 345555566666665322 233
Q ss_pred CCCccEEEEEechhhHHHHHHHHh
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
++...|.|+|.|||+.|+-++.-.
T Consensus 247 fpha~IiLvGrsmGAlVachVSps 270 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPS 270 (784)
T ss_pred CCCCceEEEecccCceeeEEeccc
Confidence 678899999999998777665543
No 214
>KOG3043|consensus
Probab=89.74 E-value=0.95 Score=38.29 Aligned_cols=94 Identities=15% Similarity=0.175 Sum_probs=59.0
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCC---CCC---Cchhh--hhcchHHHHHHHHHHHHHHHhc
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGL---SAF---PWYTN--AATNTHIVGHFIAAFIRFLQSK 124 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~---~~~---~~y~~--~~~~~~~v~~~l~~~l~~l~~~ 124 (235)
+..||+|--|.|.... -.+..++.+.. .||+|+++|+-.+ +.+ ..++. ...+.+..-+++..++++|...
T Consensus 39 ~~~li~i~DvfG~~~~-n~r~~Adk~A~-~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~ 116 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFP-NTREGADKVAL-NGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH 116 (242)
T ss_pred CeEEEEEEeeeccccH-HHHHHHHHHhc-CCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc
Confidence 3567777766665542 24556665444 4899999998776 111 11111 1123344556788888888755
Q ss_pred CCCCccEEEEEechhhHHHHHHHHh
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
| +..+|-++|+.+||-++..+...
T Consensus 117 g-~~kkIGv~GfCwGak~vv~~~~~ 140 (242)
T KOG3043|consen 117 G-DSKKIGVVGFCWGAKVVVTLSAK 140 (242)
T ss_pred C-CcceeeEEEEeecceEEEEeecc
Confidence 5 46899999999999877544333
No 215
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=89.34 E-value=0.38 Score=36.98 Aligned_cols=32 Identities=16% Similarity=0.283 Sum_probs=24.5
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRR 81 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~ 81 (235)
++.+|.|+-+|||+|...+-..+.+++++...
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~ 80 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKS 80 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhc
Confidence 68899999999999999864445666665443
No 216
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=89.18 E-value=1.5 Score=41.85 Aligned_cols=112 Identities=7% Similarity=0.039 Sum_probs=62.9
Q ss_pred CCCcEEEEEeCCCCCCC--CCc-hHHHHHH--HHhcCCeEEEEEeCCCCCCC-CchhhhhcchHHHHHHHHHHHHHHHhc
Q psy4317 51 RQMTTVFYIHGFTEQAN--GES-GTTVKDA--YLRRGDFNIILVDWSGLSAF-PWYTNAATNTHIVGHFIAAFIRFLQSK 124 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~--~~~-~~~l~~~--ll~~~~~nVi~vD~~~~~~~-~~y~~~~~~~~~v~~~l~~~l~~l~~~ 124 (235)
...|+++..+=+.=... ..+ ...+.++ +...+||.||.+|-||...+ ..+..- .. .-+++-.+.|+++.+.
T Consensus 43 g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~-~~--~E~~Dg~D~I~Wia~Q 119 (563)
T COG2936 43 GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE-SS--REAEDGYDTIEWLAKQ 119 (563)
T ss_pred CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee-cc--ccccchhHHHHHHHhC
Confidence 56777777772222221 111 1112221 33445899999999994332 332211 11 1223455566666544
Q ss_pred CCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCC
Q psy4317 125 GFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYG 170 (235)
Q Consensus 125 ~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~ 170 (235)
-..-.+|-.+|-|.+|+...++|..-+. .+.++.|....++
T Consensus 120 pWsNG~Vgm~G~SY~g~tq~~~Aa~~pP-----aLkai~p~~~~~D 160 (563)
T COG2936 120 PWSNGNVGMLGLSYLGFTQLAAAALQPP-----ALKAIAPTEGLVD 160 (563)
T ss_pred CccCCeeeeecccHHHHHHHHHHhcCCc-----hheeecccccccc
Confidence 4445689999999999999998887554 3334444444444
No 217
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.84 E-value=0.7 Score=40.57 Aligned_cols=26 Identities=35% Similarity=0.684 Sum_probs=23.2
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
++..+|-+-||||||.+|..++..+.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 56779999999999999999999874
No 218
>KOG4540|consensus
Probab=88.84 E-value=0.7 Score=40.57 Aligned_cols=26 Identities=35% Similarity=0.684 Sum_probs=23.2
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
++..+|-+-||||||.+|..++..+.
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC
Confidence 56779999999999999999999874
No 219
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=88.21 E-value=3.8 Score=33.60 Aligned_cols=45 Identities=11% Similarity=0.359 Sum_probs=34.4
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCC
Q psy4317 48 HMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSG 93 (235)
Q Consensus 48 ~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~ 93 (235)
.....++.+|++-|..++..+.....+.+.|.+. |++++++|=..
T Consensus 17 ~~~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~-G~~~y~LDGDn 61 (197)
T COG0529 17 ALKGQKGAVIWFTGLSGSGKSTIANALEEKLFAK-GYHVYLLDGDN 61 (197)
T ss_pred HHhCCCCeEEEeecCCCCCHHHHHHHHHHHHHHc-CCeEEEecChh
Confidence 3466788999999999999875555565555555 79999999554
No 220
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=88.17 E-value=2.1 Score=40.27 Aligned_cols=96 Identities=15% Similarity=0.196 Sum_probs=56.6
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHH-------------------HHHHhcCCeEEEEEeCCCCCCCCch---hhhhcchHH
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVK-------------------DAYLRRGDFNIILVDWSGLSAFPWY---TNAATNTHI 109 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~-------------------~~ll~~~~~nVi~vD~~~~~~~~~y---~~~~~~~~~ 109 (235)
++|.+|.+-|-.|.++. +- .+. ..++. ..++|.+|.+-+... .| .....++..
T Consensus 100 ~rPvi~wlNGGPGcSS~-~g-~l~elGP~rI~~~~~P~~~~NP~SW~~--~adLvFiDqPvGTGf-S~a~~~e~~~d~~~ 174 (498)
T COG2939 100 NRPVIFWLNGGPGCSSV-TG-LLGELGPKRIQSGTSPSYPDNPGSWLD--FADLVFIDQPVGTGF-SRALGDEKKKDFEG 174 (498)
T ss_pred CCceEEEecCCCChHhh-hh-hhhhcCCeeeeCCCCCCCCCCcccccc--CCceEEEecCcccCc-ccccccccccchhc
Confidence 57788888887776642 11 110 01222 357899997764331 11 112344555
Q ss_pred HHHHHHHHHHHHH----hcCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 110 VGHFIAAFIRFLQ----SKGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 110 v~~~l~~~l~~l~----~~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
+++++..+.+.+. +..-...+.+|+|-|.|||=+-.+|..+.+
T Consensus 175 ~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred cchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 5555555554433 333345689999999999988877776654
No 221
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=87.77 E-value=9.1 Score=33.21 Aligned_cols=40 Identities=28% Similarity=0.293 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 113 FIAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 113 ~l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
.|.+...+|.+.-.+.++|.|+|+|=||..|-.++..+..
T Consensus 76 ~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i~~ 115 (277)
T PF09994_consen 76 RIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMIDK 115 (277)
T ss_pred HHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHHhh
Confidence 4455555554333467789999999999999988877643
No 222
>KOG4389|consensus
Probab=86.67 E-value=1.6 Score=40.95 Aligned_cols=90 Identities=12% Similarity=0.129 Sum_probs=54.6
Q ss_pred CCCc-EEEEEeC---CCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCch----hhhhcchHHHHHHHH-HHH-HH
Q psy4317 51 RQMT-TVFYIHG---FTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWY----TNAATNTHIVGHFIA-AFI-RF 120 (235)
Q Consensus 51 ~~~p-~vi~iHG---~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y----~~~~~~~~~v~~~l~-~~l-~~ 120 (235)
+.++ ++|.|-| |.|+.+-+.+. .+.+.+.++.-|+.++||-++-.-.| +.+..|+...-+.|| +++ +.
T Consensus 132 p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~N 209 (601)
T KOG4389|consen 132 PYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQEN 209 (601)
T ss_pred CCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHh
Confidence 3344 4556777 66666543221 23344556777788888876432122 245567766666655 233 33
Q ss_pred HHhcCCCCccEEEEEechhhHH
Q psy4317 121 LQSKGFPLHKMHVIGFSLGAEI 142 (235)
Q Consensus 121 l~~~~~~~~~i~lIGHSlGa~v 142 (235)
+...|-++++|+|.|-|.||.-
T Consensus 210 i~aFGGnp~~vTLFGESAGaAS 231 (601)
T KOG4389|consen 210 IAAFGGNPSRVTLFGESAGAAS 231 (601)
T ss_pred HHHhCCCcceEEEeccccchhh
Confidence 3367779999999999999843
No 223
>KOG1202|consensus
Probab=85.03 E-value=2.8 Score=43.66 Aligned_cols=108 Identities=14% Similarity=0.160 Sum_probs=61.0
Q ss_pred ccccccCCCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHH
Q psy4317 41 EMDLKMSHMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRF 120 (235)
Q Consensus 41 ~~~i~~~~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~ 120 (235)
+..++...-....|+++|+|-..+.... ...++. +-.+-.+.+-... . ....+++.+|....+-+++
T Consensus 2111 ~~~l~~ka~~se~~~~Ffv~pIEG~tt~--l~~la~----rle~PaYglQ~T~-----~--vP~dSies~A~~yirqirk 2177 (2376)
T KOG1202|consen 2111 PVLLRLKAVQSEEPPLFFVHPIEGFTTA--LESLAS----RLEIPAYGLQCTE-----A--VPLDSIESLAAYYIRQIRK 2177 (2376)
T ss_pred cHHHhhhhhcccCCceEEEeccccchHH--HHHHHh----hcCCcchhhhccc-----c--CCcchHHHHHHHHHHHHHh
Confidence 3333333356788999999988877652 233332 2111111111110 0 0112345544444344444
Q ss_pred HHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 121 LQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 121 l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+ .+...-+++|+|.|+-++-.+|..+.+..-...+++||-+
T Consensus 2178 v----QP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2178 V----QPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred c----CCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 3 3556789999999999999999887654233347788865
No 224
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=84.17 E-value=0.63 Score=35.00 Aligned_cols=19 Identities=11% Similarity=0.256 Sum_probs=10.3
Q ss_pred CCCCCcEEEEEeCCCCCCC
Q psy4317 49 MNRQMTTVFYIHGFTEQAN 67 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~ 67 (235)
-+++..+++|+|||.||--
T Consensus 88 ~~~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp S-TT-EEEEEE--SS--GG
T ss_pred CCCCCeEEEEECCCCccHH
Confidence 3566778999999999854
No 225
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=84.04 E-value=1.9 Score=40.13 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=55.0
Q ss_pred CCCCcEEEEEeCCCCCCCC--------CchH----------HH-HHHHHhcCCeEEEEEeCCCCCCCCchhhh----hcc
Q psy4317 50 NRQMTTVFYIHGFTEQANG--------ESGT----------TV-KDAYLRRGDFNIILVDWSGLSAFPWYTNA----ATN 106 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~--------~~~~----------~l-~~~ll~~~~~nVi~vD~~~~~~~~~y~~~----~~~ 106 (235)
..+.|+||.+-|-.|.++. ++.. .+ .+.+.-....|++.+|-+-+... .|... ..+
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGf-Sy~~~~~~~~~d 141 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGF-SYSKTPIDKTGD 141 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCc-cCCCCCCCccCC
Confidence 3467889999888776542 1100 00 00011112389999998876441 23211 112
Q ss_pred hHHHHHHHHHHHHHHH-hcC-CCCccEEEEEechhhHHHHHHHHhc
Q psy4317 107 THIVGHFIAAFIRFLQ-SKG-FPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 107 ~~~v~~~l~~~l~~l~-~~~-~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
. ..++++.+++.... +.. +...+++|+|.|.||+-+-.+|..+
T Consensus 142 ~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i 186 (433)
T PLN03016 142 I-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 186 (433)
T ss_pred H-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHH
Confidence 2 22355655554433 221 3456899999999999877766654
No 226
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=81.53 E-value=4.9 Score=37.76 Aligned_cols=92 Identities=20% Similarity=0.206 Sum_probs=55.7
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHH-HHhcCCCCcc
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRF-LQSKGFPLHK 130 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~-l~~~~~~~~~ 130 (235)
+.|..|+.-|+.....-+ ...|.+. +.. =-.+.=|-|--+. ..|..+. ..-+.|.+.|+. |...|.+.++
T Consensus 288 KPPL~VYFSGyR~aEGFE-gy~MMk~-Lg~--PfLL~~DpRleGG-aFYlGs~----eyE~~I~~~I~~~L~~LgF~~~q 358 (511)
T TIGR03712 288 KPPLNVYFSGYRPAEGFE-GYFMMKR-LGA--PFLLIGDPRLEGG-AFYLGSD----EYEQGIINVIQEKLDYLGFDHDQ 358 (511)
T ss_pred CCCeEEeeccCcccCcch-hHHHHHh-cCC--CeEEeeccccccc-eeeeCcH----HHHHHHHHHHHHHHHHhCCCHHH
Confidence 467899999999855432 2233332 222 1234447665333 3343222 112334444433 3345899999
Q ss_pred EEEEEechhhHHHHHHHHhcCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~ 152 (235)
++|-|-|||..=|.++|+.+..
T Consensus 359 LILSGlSMGTfgAlYYga~l~P 380 (511)
T TIGR03712 359 LILSGLSMGTFGALYYGAKLSP 380 (511)
T ss_pred eeeccccccchhhhhhcccCCC
Confidence 9999999999999999999854
No 227
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=78.92 E-value=1.4 Score=29.54 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=12.2
Q ss_pred CCCCCcEEEEEeCCCCCCCCCch
Q psy4317 49 MNRQMTTVFYIHGFTEQANGESG 71 (235)
Q Consensus 49 ~~~~~p~vi~iHG~~~s~~~~~~ 71 (235)
....+|+|++.||..+++.. |.
T Consensus 39 ~~~~k~pVll~HGL~~ss~~-wv 60 (63)
T PF04083_consen 39 QNKKKPPVLLQHGLLQSSDD-WV 60 (63)
T ss_dssp TTTT--EEEEE--TT--GGG-GC
T ss_pred cCCCCCcEEEECCcccChHH-HH
Confidence 46789999999999988763 53
No 228
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=76.68 E-value=18 Score=30.12 Aligned_cols=84 Identities=13% Similarity=0.158 Sum_probs=46.5
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCC-ccEEE
Q psy4317 55 TVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPL-HKMHV 133 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~-~~i~l 133 (235)
++|++=||.+...... ....+.|.+ .+++++.+=-+...- .++. ..+.. .+..+++.+.+..... .++.+
T Consensus 1 plvvl~gW~gA~~~hl-~KY~~~Y~~-~g~~il~~~~~~~~~--~~~~--~~~~~---~~~~l~~~l~~~~~~~~~~il~ 71 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHL-AKYSDLYQD-PGFDILLVTSPPADF--FWPS--KRLAP---AADKLLELLSDSQSASPPPILF 71 (240)
T ss_pred CEEEEEeCCCCCHHHH-HHHHHHHHh-cCCeEEEEeCCHHHH--eeec--cchHH---HHHHHHHHhhhhccCCCCCEEE
Confidence 4788899998876533 333444555 589999987553211 0111 22333 3334444444322222 38999
Q ss_pred EEechhhHHH-HHHH
Q psy4317 134 IGFSLGAEIA-GFTG 147 (235)
Q Consensus 134 IGHSlGa~va-~~~a 147 (235)
=.+|.||... ..+.
T Consensus 72 H~FSnGG~~~~~~l~ 86 (240)
T PF05705_consen 72 HSFSNGGSFLYSQLL 86 (240)
T ss_pred EEEECchHHHHHHHH
Confidence 9999966554 4444
No 229
>KOG1551|consensus
Probab=76.12 E-value=3.7 Score=35.81 Aligned_cols=87 Identities=16% Similarity=0.230 Sum_probs=47.6
Q ss_pred HHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHH------HH-HHHHHHHHHH-hcCCCCccEEEEEechhhHHHHHHH
Q psy4317 76 DAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIV------GH-FIAAFIRFLQ-SKGFPLHKMHVIGFSLGAEIAGFTG 147 (235)
Q Consensus 76 ~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v------~~-~l~~~l~~l~-~~~~~~~~i~lIGHSlGa~va~~~a 147 (235)
+.++.+ +...+++.=+-+++.....+-....+.+ |+ .|+++...+. +......++.|+|-||||-+|.+++
T Consensus 135 ~p~~k~-~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vg 213 (371)
T KOG1551|consen 135 KPINKR-EIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVG 213 (371)
T ss_pred Cchhhh-cchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhc
Confidence 334444 4666667666665532222222222222 22 2333333332 2223457899999999999999999
Q ss_pred HhcCCCCCCCcccccCCC
Q psy4317 148 KALGTVDKLPRITGLDPA 165 (235)
Q Consensus 148 ~~~~~~g~v~rI~~ldPa 165 (235)
...+. .|..+-.|.+.
T Consensus 214 S~~q~--Pva~~p~l~~~ 229 (371)
T KOG1551|consen 214 SLHQK--PVATAPCLNSS 229 (371)
T ss_pred ccCCC--Ccccccccccc
Confidence 97654 45555445443
No 230
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=73.93 E-value=11 Score=30.06 Aligned_cols=71 Identities=15% Similarity=0.249 Sum_probs=40.7
Q ss_pred CcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCC----CCCCCchhhhhcchHHHHHHHHHHHHHHHhcCC
Q psy4317 53 MTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSG----LSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGF 126 (235)
Q Consensus 53 ~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~----~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~ 126 (235)
++.+|++=|..++..+.....+...|... +.+|+.+|-.. ......|... +-....+.++++...|.+.|.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~-g~~~~~LDgD~lR~~l~~dl~fs~~--dR~e~~rr~~~~A~ll~~~G~ 75 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFAR-GIKVYLLDGDNLRHGLNADLGFSKE--DREENIRRIAEVAKLLADQGI 75 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHT-TS-EEEEEHHHHCTTTTTT--SSHH--HHHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHc-CCcEEEecCcchhhccCCCCCCCHH--HHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999998765555565555554 79999998443 2222233221 122333556666666655553
No 231
>KOG2182|consensus
Probab=73.59 E-value=36 Score=32.21 Aligned_cols=116 Identities=9% Similarity=0.034 Sum_probs=69.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCch----HHHHHHHHhcCCeEEEEEeCCCCCCCCchhh------hhcchHHHHHHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESG----TTVKDAYLRRGDFNIILVDWSGLSAFPWYTN------AATNTHIVGHFIAAFIR 119 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~----~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~------~~~~~~~v~~~l~~~l~ 119 (235)
.++.|..++|=| -+..+..|. ..+ ..+.++-+..|+.+..|-.+++..+.. ...+..+.-.||+++|+
T Consensus 83 ~~~gPiFLmIGG-Egp~~~~wv~~~~~~~-~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 83 KPGGPIFLMIGG-EGPESDKWVGNENLTW-LQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred cCCCceEEEEcC-CCCCCCCccccCcchH-HHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 456666666666 222221231 011 123334478899999998765332221 11234555567888998
Q ss_pred HHH-hcCCCC-ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCCCCC
Q psy4317 120 FLQ-SKGFPL-HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPLYGF 171 (235)
Q Consensus 120 ~l~-~~~~~~-~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~~ 171 (235)
.+. +.+... .+.+..|-|.-|.+++.+-..+|+. +-. .+..++|+...
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel--~~G--svASSapv~A~ 210 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL--TVG--SVASSAPVLAK 210 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh--hee--ecccccceeEE
Confidence 887 444433 4899999999999999998888873 222 23445555544
No 232
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=73.12 E-value=7.4 Score=30.17 Aligned_cols=15 Identities=20% Similarity=0.636 Sum_probs=11.4
Q ss_pred CCCcEEEEEeC--CCCC
Q psy4317 51 RQMTTVFYIHG--FTEQ 65 (235)
Q Consensus 51 ~~~p~vi~iHG--~~~s 65 (235)
++..++||+|| |.+.
T Consensus 55 ~~y~~viFvHGCFWh~H 71 (150)
T COG3727 55 PKYRCVIFVHGCFWHGH 71 (150)
T ss_pred cCceEEEEEeeeeccCC
Confidence 35678999999 6654
No 233
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=72.11 E-value=5.4 Score=38.43 Aligned_cols=81 Identities=21% Similarity=0.176 Sum_probs=56.5
Q ss_pred chHHHHHHHHhcCCeEEEEEeCCCCCCCC-chhhhh--cchHHHHHHHHHHHHHHHhcCC-CCccEEEEEechhhHHHHH
Q psy4317 70 SGTTVKDAYLRRGDFNIILVDWSGLSAFP-WYTNAA--TNTHIVGHFIAAFIRFLQSKGF-PLHKMHVIGFSLGAEIAGF 145 (235)
Q Consensus 70 ~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-~y~~~~--~~~~~v~~~l~~~l~~l~~~~~-~~~~i~lIGHSlGa~va~~ 145 (235)
+...+ ..+|.++ ...+.-+.||++... .+-++. .+-..+-++...+.+.|.+.++ .++++-+-|-|=||-+.+.
T Consensus 439 fs~~~-~~WLerG-g~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~ 516 (648)
T COG1505 439 FSGSR-KLWLERG-GVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGA 516 (648)
T ss_pred cchhh-HHHHhcC-CeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEe
Confidence 33444 6788885 455667999987642 233332 2334566777778888886665 7899999999999998887
Q ss_pred HHHhcCC
Q psy4317 146 TGKALGT 152 (235)
Q Consensus 146 ~a~~~~~ 152 (235)
+-.+.|+
T Consensus 517 alTQrPe 523 (648)
T COG1505 517 ALTQRPE 523 (648)
T ss_pred eeccChh
Confidence 6666676
No 234
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=69.08 E-value=17 Score=32.17 Aligned_cols=65 Identities=17% Similarity=0.107 Sum_probs=39.5
Q ss_pred eEEEEEeCCCCCCCCchhhh----hcchHHHHHHHHHHHHHHH-hcC-CCCccEEEEEechhhHHHHHHHHhc
Q psy4317 84 FNIILVDWSGLSAFPWYTNA----ATNTHIVGHFIAAFIRFLQ-SKG-FPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 84 ~nVi~vD~~~~~~~~~y~~~----~~~~~~v~~~l~~~l~~l~-~~~-~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
.|++.+|-|-+.. -.|... ..+.. .++++.++|+.+. +.. +...+++|.|-|.|||-+=.+|..+
T Consensus 2 aNvLfiDqPvGvG-fSy~~~~~~~~~d~~-~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I 72 (319)
T PLN02213 2 ANIIFLDQPVGSG-FSYSKTPIDKTGDIS-EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 72 (319)
T ss_pred ccEEEecCCCCCC-CCCCCCCCCccccHH-HHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHH
Confidence 5899999996543 123221 11222 2355655555443 221 4567899999999999876666654
No 235
>PLN02209 serine carboxypeptidase
Probab=67.21 E-value=13 Score=34.63 Aligned_cols=67 Identities=22% Similarity=0.187 Sum_probs=40.2
Q ss_pred CeEEEEEeCCCCCCCCchhhh---hcchHHHHHHHHHHHHHHH-hcC-CCCccEEEEEechhhHHHHHHHHhc
Q psy4317 83 DFNIILVDWSGLSAFPWYTNA---ATNTHIVGHFIAAFIRFLQ-SKG-FPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 83 ~~nVi~vD~~~~~~~~~y~~~---~~~~~~v~~~l~~~l~~l~-~~~-~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
..|++.+|-+-+... .|... ..+....++++.++++... +.. +...+++|.|.|.|||-+-.+|..+
T Consensus 117 ~anllfiDqPvGtGf-Sy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i 188 (437)
T PLN02209 117 TANIIFLDQPVGSGF-SYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEI 188 (437)
T ss_pred cCcEEEecCCCCCCc-cCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHH
Confidence 379999998875431 23211 1122234466666665543 222 3346899999999998766555544
No 236
>KOG1283|consensus
Probab=66.43 E-value=19 Score=32.40 Aligned_cols=98 Identities=13% Similarity=0.165 Sum_probs=65.2
Q ss_pred CCCcEEEEEeCCCCCCCCCc--hHHHHH----------HHHhcCCeEEEEEeCCCCCCCCchhh----hhcchHHHHHHH
Q psy4317 51 RQMTTVFYIHGFTEQANGES--GTTVKD----------AYLRRGDFNIILVDWSGLSAFPWYTN----AATNTHIVGHFI 114 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~--~~~l~~----------~ll~~~~~nVi~vD~~~~~~~~~y~~----~~~~~~~v~~~l 114 (235)
..+|..+.+-|-.+.++..+ +..+-+ .+++ ..+++.||-+-++. ..|.. -..+.+++|.++
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk--~adllfvDnPVGaG-fSyVdg~~~Y~~~~~qia~Dl 105 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK--DADLLFVDNPVGAG-FSYVDGSSAYTTNNKQIALDL 105 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh--hccEEEecCCCcCc-eeeecCcccccccHHHHHHHH
Confidence 35677777877666654432 111111 1333 47899999987654 22321 135678899999
Q ss_pred HHHHHHHHhc--CCCCccEEEEEechhhHHHHHHHHhcC
Q psy4317 115 AAFIRFLQSK--GFPLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 115 ~~~l~~l~~~--~~~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
.++++.+... .+....++|+--|.||-+|...|..+.
T Consensus 106 ~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~ 144 (414)
T KOG1283|consen 106 VELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELD 144 (414)
T ss_pred HHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHH
Confidence 9999887632 256678999999999999988887643
No 237
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=65.93 E-value=12 Score=35.22 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=36.2
Q ss_pred cCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 124 KGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 124 ~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
++..++.-+..|-|-||.-++.+|+++|+ ....|++-.||.
T Consensus 110 Yg~~p~~sY~~GcS~GGRqgl~~AQryP~--dfDGIlAgaPA~ 150 (474)
T PF07519_consen 110 YGKAPKYSYFSGCSTGGRQGLMAAQRYPE--DFDGILAGAPAI 150 (474)
T ss_pred hCCCCCceEEEEeCCCcchHHHHHHhChh--hcCeEEeCCchH
Confidence 45678899999999999999999999998 688998888883
No 238
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=64.52 E-value=8.4 Score=35.59 Aligned_cols=98 Identities=14% Similarity=0.056 Sum_probs=69.9
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCc--hhhhhcchHHHHHHHHHHHHHHHhcC
Q psy4317 48 HMNRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPW--YTNAATNTHIVGHFIAAFIRFLQSKG 125 (235)
Q Consensus 48 ~~~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~--y~~~~~~~~~v~~~l~~~l~~l~~~~ 125 (235)
+-+.++|+|++.-|+.-+.+ +....+. .++ +-|-+.|.+|-.+.+.. -.....++.+.|.+..++++.|..
T Consensus 58 Hk~~drPtV~~T~GY~~~~~-p~r~Ept-~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~-- 130 (448)
T PF05576_consen 58 HKDFDRPTVLYTEGYNVSTS-PRRSEPT-QLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP-- 130 (448)
T ss_pred EcCCCCCeEEEecCcccccC-ccccchh-Hhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh--
Confidence 34678999999999988754 2322332 344 57789999998654321 112335678888888888887753
Q ss_pred CCCccEEEEEechhhHHHHHHHHhcCC
Q psy4317 126 FPLHKMHVIGFSLGAEIAGFTGKALGT 152 (235)
Q Consensus 126 ~~~~~i~lIGHSlGa~va~~~a~~~~~ 152 (235)
+-..|.+--|-|=||+.+.+.=+.+|.
T Consensus 131 iY~~kWISTG~SKGGmTa~y~rrFyP~ 157 (448)
T PF05576_consen 131 IYPGKWISTGGSKGGMTAVYYRRFYPD 157 (448)
T ss_pred hccCCceecCcCCCceeEEEEeeeCCC
Confidence 235688899999999999998888887
No 239
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=63.76 E-value=69 Score=28.18 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=47.9
Q ss_pred HHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHH-HHHHhcC-CCCccEEEEEechhhHHHHHHHHhcCCCC
Q psy4317 77 AYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFI-RFLQSKG-FPLHKMHVIGFSLGAEIAGFTGKALGTVD 154 (235)
Q Consensus 77 ~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l-~~l~~~~-~~~~~i~lIGHSlGa~va~~~a~~~~~~g 154 (235)
+++..++..++++-|+...+-..|..........++.|-+.+ ..+.+.- -.--|++|.|-|||+.-+..+-..+.+..
T Consensus 55 E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~ 134 (289)
T PF10081_consen 55 EYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLR 134 (289)
T ss_pred HHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhh
Confidence 456678899999999876542233222333344444444333 2232211 12347999999999976654433333221
Q ss_pred -CCCcccccCC
Q psy4317 155 -KLPRITGLDP 164 (235)
Q Consensus 155 -~v~rI~~ldP 164 (235)
++...+..-|
T Consensus 135 ~~vdGalw~Gp 145 (289)
T PF10081_consen 135 DRVDGALWVGP 145 (289)
T ss_pred hhcceEEEeCC
Confidence 5555544433
No 240
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=63.68 E-value=1.1e+02 Score=27.73 Aligned_cols=35 Identities=29% Similarity=0.214 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 115 AAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 115 ~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
.+...+|.+.--+.++|++.|||-||.+|--+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 33334444333367899999999999998655544
No 241
>KOG2170|consensus
Probab=63.41 E-value=7.7 Score=34.45 Aligned_cols=29 Identities=17% Similarity=0.313 Sum_probs=21.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAY 78 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~l 78 (235)
++.||.++=+|||+|+...-..+.+++.+
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va~iiA~n~ 134 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVAEIIAENL 134 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHHHHHHHHH
Confidence 57899999999999999863334455544
No 242
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=62.45 E-value=12 Score=32.46 Aligned_cols=31 Identities=23% Similarity=0.553 Sum_probs=23.8
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.+++.+ .++|-|+||.+++.+|..
T Consensus 28 VL~aLeE~gi~~d--~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGIPID--AIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCCCcc--EEEEECHHHHHHHHHHcC
Confidence 5666666677544 689999999999887765
No 243
>PF03283 PAE: Pectinacetylesterase
Probab=62.29 E-value=13 Score=33.68 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCC-CCccEEEEEechhhHHHHHHHHhcC
Q psy4317 114 IAAFIRFLQSKGF-PLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 114 l~~~l~~l~~~~~-~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
+..+|+.|.+.++ +.++|.|.|.|.||.-+..-+.++.
T Consensus 140 ~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~ 178 (361)
T PF03283_consen 140 LRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVR 178 (361)
T ss_pred HHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHH
Confidence 3445666664443 5789999999999988776555543
No 244
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=62.08 E-value=11 Score=32.53 Aligned_cols=30 Identities=33% Similarity=0.442 Sum_probs=21.2
Q ss_pred HHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 119 RFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 119 ~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+.|.+.|+.+ -.++|||+|-..|..++..+
T Consensus 74 ~~l~~~Gi~p--~~~~GhSlGE~aA~~~ag~~ 103 (298)
T smart00827 74 RLWRSWGVRP--DAVVGHSLGEIAAAYVAGVL 103 (298)
T ss_pred HHHHHcCCcc--cEEEecCHHHHHHHHHhCCC
Confidence 3344556644 47999999999888776543
No 245
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=58.75 E-value=67 Score=26.41 Aligned_cols=72 Identities=17% Similarity=0.188 Sum_probs=47.1
Q ss_pred HHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEech----hhHHHHHHHHhcCCC
Q psy4317 78 YLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSL----GAEIAGFTGKALGTV 153 (235)
Q Consensus 78 ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSl----Ga~va~~~a~~~~~~ 153 (235)
+...+--.|+.+|-..... | +.+..++.|+++++.. + -.+.|+|||. |..++..+|.++.-.
T Consensus 72 l~~~G~d~V~~~~~~~~~~---~-----~~e~~a~al~~~i~~~-----~-p~lVL~~~t~~~~~grdlaprlAarLga~ 137 (202)
T cd01714 72 ALAMGADRAILVSDRAFAG---A-----DTLATAKALAAAIKKI-----G-VDLILTGKQSIDGDTGQVGPLLAELLGWP 137 (202)
T ss_pred HHHcCCCEEEEEecccccC---C-----ChHHHHHHHHHHHHHh-----C-CCEEEEcCCcccCCcCcHHHHHHHHhCCC
Confidence 3334335788877654432 2 3345556666666543 3 3689999999 889999999988653
Q ss_pred CCCCcccccCC
Q psy4317 154 DKLPRITGLDP 164 (235)
Q Consensus 154 g~v~rI~~ldP 164 (235)
.+.-++.|..
T Consensus 138 -lvsdv~~l~~ 147 (202)
T cd01714 138 -QITYVSKIEI 147 (202)
T ss_pred -ccceEEEEEE
Confidence 6777776643
No 246
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.59 E-value=25 Score=28.46 Aligned_cols=33 Identities=15% Similarity=0.352 Sum_probs=23.3
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
+.|.+|.+|||-.||-.+-+.+ ++++.|+++-.
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~----~lksatAiNGT 89 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGI----RLKSATAINGT 89 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhc----cccceeeecCC
Confidence 3467899999999988877665 45555555543
No 247
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=57.94 E-value=17 Score=30.69 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=24.3
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.++.++--.++|-|+||.+|..++..
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcC
Confidence 455666666654456899999999999877654
No 248
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=57.39 E-value=25 Score=29.34 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=23.7
Q ss_pred HHHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 116 AFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 116 ~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
-+++.|.+.+++++ .++|-|+||.+|..++..
T Consensus 17 GvL~aL~e~gi~~~--~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 17 GFLAALLEMGLEPS--AISGTSAGALVGGLFASG 48 (221)
T ss_pred HHHHHHHHcCCCce--EEEEeCHHHHHHHHHHcC
Confidence 34555666666554 699999999999988764
No 249
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=57.09 E-value=11 Score=32.14 Aligned_cols=18 Identities=22% Similarity=0.302 Sum_probs=14.3
Q ss_pred CCccEEEEEechhhHHHH
Q psy4317 127 PLHKMHVIGFSLGAEIAG 144 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~ 144 (235)
+.+.|+++|||||-.=.-
T Consensus 233 ~i~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYP 250 (270)
T ss_pred CCCEEEEEeCCCchhhHH
Confidence 568999999999975433
No 250
>PRK10279 hypothetical protein; Provisional
Probab=56.00 E-value=18 Score=31.85 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=23.2
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.++++ -.++|-|+||.+++.+|..
T Consensus 23 VL~aL~E~gi~~--d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 23 VINALKKVGIEI--DIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHHHcCCCc--CEEEEEcHHHHHHHHHHcC
Confidence 466666667755 3689999999999877753
No 251
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=55.97 E-value=26 Score=30.96 Aligned_cols=32 Identities=31% Similarity=0.488 Sum_probs=24.1
Q ss_pred HHHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 116 AFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 116 ~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
-+++.|.+.++.++ .++|-|+||.+++.++..
T Consensus 32 GvL~aLee~gi~~d--~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 32 GVIKALEEAGIPVD--MVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHcCCCCC--EEEEECHHHHHHHHHHcC
Confidence 35666666676543 679999999999887765
No 252
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=55.97 E-value=1e+02 Score=28.42 Aligned_cols=99 Identities=19% Similarity=0.189 Sum_probs=62.0
Q ss_pred EEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCC---chhh------------h-------hcchHHHHHHH
Q psy4317 57 FYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFP---WYTN------------A-------ATNTHIVGHFI 114 (235)
Q Consensus 57 i~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~---~y~~------------~-------~~~~~~v~~~l 114 (235)
|+|=|-.++... -..++.+.+.+ .+.+|+.+|-.-.+... ..+. . ..-+..+++.+
T Consensus 4 I~iigT~DTK~~-E~~yl~~~i~~-~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 4 IAIIGTLDTKGE-ELLYLRDQIEA-QGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEEccCCCHH-HHHHHHHHHHH-CCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 455566666654 34556555444 58999999987653210 1100 0 01234555666
Q ss_pred HHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccc
Q psy4317 115 AAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRIT 160 (235)
Q Consensus 115 ~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~ 160 (235)
.+++..|.+.+ .++-|.-+|=|.|..++..+.+.+|-+ +.+++
T Consensus 82 ~~~v~~l~~~g-~i~Gvi~~GGs~GT~lat~aMr~LPiG--~PKlm 124 (403)
T PF06792_consen 82 ARFVSDLYDEG-KIDGVIGIGGSGGTALATAAMRALPIG--FPKLM 124 (403)
T ss_pred HHHHHHHHhcC-CccEEEEecCCccHHHHHHHHHhCCCC--CCeEE
Confidence 66777766444 467788999999999999999988763 55543
No 253
>KOG2521|consensus
Probab=55.96 E-value=54 Score=29.69 Aligned_cols=91 Identities=7% Similarity=0.053 Sum_probs=52.0
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCc
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLH 129 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~ 129 (235)
...+++|+++=||.+..+. +.......|.++ |+.++.+-.+.......-...........+.+.+++. +...+..
T Consensus 35 ~~s~k~Iv~~~gWag~~~r-~l~ky~~~Yq~~-g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~---~~~~~~~ 109 (350)
T KOG2521|consen 35 GESEKPIVVLLGWAGAIDR-NLMKYSKIYQDK-GYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLS---DYNSDPC 109 (350)
T ss_pred CCccccEEEEeeeccccch-hHHHHHHHHhcC-CceEEEecCcccccccccccccchhhHHHHHHHHHhh---hccCCcC
Confidence 3445578899999999886 555555555544 7888877766543211000011111222222333332 3345677
Q ss_pred cEEEEEechhhHHHHH
Q psy4317 130 KMHVIGFSLGAEIAGF 145 (235)
Q Consensus 130 ~i~lIGHSlGa~va~~ 145 (235)
.+.+--+|+||-++.+
T Consensus 110 pi~fh~FS~ng~~~~~ 125 (350)
T KOG2521|consen 110 PIIFHVFSGNGVRLMY 125 (350)
T ss_pred ceEEEEecCCceeehH
Confidence 8888899999977553
No 254
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=54.65 E-value=19 Score=27.22 Aligned_cols=14 Identities=29% Similarity=0.693 Sum_probs=11.0
Q ss_pred CCCcEEEEEeC--CCC
Q psy4317 51 RQMTTVFYIHG--FTE 64 (235)
Q Consensus 51 ~~~p~vi~iHG--~~~ 64 (235)
+...++||||| |.+
T Consensus 54 ~~~klaIfVDGcfWHg 69 (117)
T TIGR00632 54 DEYRCVIFIHGCFWHG 69 (117)
T ss_pred cCCCEEEEEccccccc
Confidence 46789999999 564
No 255
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=54.19 E-value=25 Score=27.83 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=23.1
Q ss_pred HHHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 116 AFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 116 ~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
.+++.|.+.++..+ .++|-|.||.+|..++..
T Consensus 17 Gvl~~L~~~~~~~d--~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 17 GVLKALEEAGIPID--IVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHHcCCCee--EEEEECHHHHHHHHHHcC
Confidence 34555555565443 789999999999988754
No 256
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=51.47 E-value=36 Score=27.23 Aligned_cols=33 Identities=24% Similarity=0.259 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 116 AFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 116 ~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
.+++.|.+.++.+ =.++|-|.||.+|..++...
T Consensus 16 Gvl~~L~e~~~~~--d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAGILK--KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcCCCc--ceEEEECHHHHHHHHHHcCC
Confidence 4556666556554 46899999999998877643
No 257
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=51.36 E-value=29 Score=27.50 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=23.4
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+++.|.+.++. --.++|-|+||.+|..++...
T Consensus 16 vl~aL~e~gi~--~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRERGPL--IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHcCCC--CCEEEEECHHHHHHHHHHcCC
Confidence 45555555654 347899999999999887754
No 258
>KOG1282|consensus
Probab=51.12 E-value=35 Score=32.01 Aligned_cols=101 Identities=12% Similarity=0.067 Sum_probs=60.0
Q ss_pred CCCCcEEEEEeCCCCCCCCC-chHHHH-------------HHHHhcCCeEEEEEeCCCCCCCCchhhhh----cchHHHH
Q psy4317 50 NRQMTTVFYIHGFTEQANGE-SGTTVK-------------DAYLRRGDFNIILVDWSGLSAFPWYTNAA----TNTHIVG 111 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~-~~~~l~-------------~~ll~~~~~nVi~vD~~~~~~~~~y~~~~----~~~~~v~ 111 (235)
..++|.||.+-|-.|-++.. ....+- +.+--..-.|++.+|-+-+.. -.|.... .+-+.+|
T Consensus 70 P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvG-FSYs~~~~~~~~~D~~~A 148 (454)
T KOG1282|consen 70 PETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVG-FSYSNTSSDYKTGDDGTA 148 (454)
T ss_pred CCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCC-ccccCCCCcCcCCcHHHH
Confidence 34578888899987765421 000000 001011247999999997654 2343221 2345666
Q ss_pred HHHHHHHHH-HHhcC-CCCccEEEEEechhhHHHHHHHHhcC
Q psy4317 112 HFIAAFIRF-LQSKG-FPLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 112 ~~l~~~l~~-l~~~~-~~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
+++-+++.. +.+.- +..++++|.|-|.+||.+=.+|+.+-
T Consensus 149 ~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~ 190 (454)
T KOG1282|consen 149 KDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEIL 190 (454)
T ss_pred HHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHH
Confidence 776666644 44322 45678999999999988777666643
No 259
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=49.02 E-value=30 Score=28.62 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=23.8
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+++.|.+.++..+ .++|-|.||.+|..++...
T Consensus 16 vl~aL~e~g~~~d--~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 16 VLKALAEAGIEPD--IISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHcCCCCC--EEEEECHHHHHHHHHHcCC
Confidence 4555666665433 7899999999998887765
No 260
>PRK02399 hypothetical protein; Provisional
Probab=47.96 E-value=1.9e+02 Score=26.79 Aligned_cols=99 Identities=26% Similarity=0.306 Sum_probs=60.8
Q ss_pred EEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCC---Cchh-------------hh------hcchHHHHHHH
Q psy4317 57 FYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAF---PWYT-------------NA------ATNTHIVGHFI 114 (235)
Q Consensus 57 i~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~---~~y~-------------~~------~~~~~~v~~~l 114 (235)
|+|=|-.++...+ ..++.+.+.+ .+..|+.+|-...+.. .+.+ .. ...+..+++..
T Consensus 6 I~iigT~DTK~~E-~~yl~~~i~~-~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 6 IYIAGTLDTKGEE-LAYVKDLIEA-AGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred EEEEeccCCcHHH-HHHHHHHHHH-CCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 5666777776643 4455554444 4699999998643210 0000 00 01124455556
Q ss_pred HHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccc
Q psy4317 115 AAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRIT 160 (235)
Q Consensus 115 ~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~ 160 (235)
..++..|.+.+ ..+-|.-+|=|.|..++..+.+.+|-+ +.+++
T Consensus 84 ~~~v~~L~~~g-~i~gviglGGs~GT~lat~aMr~LPiG--~PKlm 126 (406)
T PRK02399 84 AAFVRELYERG-DVAGVIGLGGSGGTALATPAMRALPIG--VPKLM 126 (406)
T ss_pred HHHHHHHHhcC-CccEEEEecCcchHHHHHHHHHhCCCC--CCeEE
Confidence 66666666544 467789999999999999999988763 44443
No 261
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=47.82 E-value=25 Score=30.42 Aligned_cols=28 Identities=25% Similarity=0.227 Sum_probs=20.0
Q ss_pred HHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 121 LQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 121 l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+.+.|+ ....++|||+|-..|..++..+
T Consensus 70 l~~~g~--~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 70 LLALLP--RPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HHhcCC--CCcEEeecCHHHHHHHHHhCCC
Confidence 334565 4567999999998888776543
No 262
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=47.72 E-value=35 Score=27.09 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=22.9
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+++.|.+.+++. =.++|-|.||.+|..++...
T Consensus 18 vl~~L~e~g~~~--d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 18 VLRALEEEGIEI--DIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHCCCCe--eEEEEeCHHHHHHHHHHcCC
Confidence 455555556543 36899999999998877653
No 263
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=47.34 E-value=29 Score=32.14 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=23.5
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.++.++ .++|-|+||.+|+.++..
T Consensus 91 VLkaL~E~gl~p~--vIsGTSaGAivAal~as~ 121 (421)
T cd07230 91 VLKALFEANLLPR--IISGSSAGSIVAAILCTH 121 (421)
T ss_pred HHHHHHHcCCCCC--EEEEECHHHHHHHHHHcC
Confidence 4556666676554 699999999999887764
No 264
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=46.63 E-value=1.1e+02 Score=26.08 Aligned_cols=77 Identities=22% Similarity=0.399 Sum_probs=44.4
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCe-EEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDF-NIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPL 128 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~-nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~ 128 (235)
+.+..+|++.||-.-.... .+.-+ +..+...+| +|++.--- .|| .+..+++.|.+.+ .
T Consensus 135 ~k~e~~vlmgHGt~h~s~~-~YacL-d~~~~~~~f~~v~v~~ve------~yP-----------~~d~vi~~l~~~~--~ 193 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNA-AYACL-DHVLDEYGFDNVFVAAVE------GYP-----------LVDTVIEYLRKNG--I 193 (265)
T ss_pred CcCeEEEEEecCCCccHHH-HHHHH-HHHHHhcCCCceEEEEec------CCC-----------cHHHHHHHHHHcC--C
Confidence 5666789999997766554 23333 344555566 77665533 343 2455677776554 4
Q ss_pred ccEEEEEech--hhHHHHHHH
Q psy4317 129 HKMHVIGFSL--GAEIAGFTG 147 (235)
Q Consensus 129 ~~i~lIGHSl--Ga~va~~~a 147 (235)
+++||+=.=+ |-|..--+|
T Consensus 194 ~~v~L~PlMlvAG~Ha~nDMa 214 (265)
T COG4822 194 KEVHLIPLMLVAGDHAKNDMA 214 (265)
T ss_pred ceEEEeeeEEeechhhhhhhc
Confidence 5677766543 445544444
No 265
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=46.55 E-value=29 Score=30.42 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=24.0
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcC
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALG 151 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~ 151 (235)
+++.|.+.+++ --.|.|-|+||.+++.+|....
T Consensus 29 Vl~aL~e~gi~--~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIP--IDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCC--ccEEEecCHHHHHHHHHHcCCC
Confidence 45556555644 3478999999999998887543
No 266
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=44.84 E-value=27 Score=31.06 Aligned_cols=19 Identities=37% Similarity=0.300 Sum_probs=15.3
Q ss_pred EEEEechhhHHHHHHHHhc
Q psy4317 132 HVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~ 150 (235)
.++|||+|=..|..++..+
T Consensus 127 ~~~GHSlGE~aA~~~AG~l 145 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGAL 145 (343)
T ss_pred eeeeccHHHHHHHHHhCCC
Confidence 5899999998888776543
No 267
>PRK12467 peptide synthase; Provisional
Probab=42.87 E-value=1e+02 Score=36.82 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=65.6
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCcc
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHK 130 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~ 130 (235)
...+.++..|.-.++... ...+.. .+.. +..|+.+..++...... ....++.++....+.+.+.. +...
T Consensus 3690 ~~~~~l~~~h~~~r~~~~--~~~l~~-~l~~-~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~----~~~p 3758 (3956)
T PRK12467 3690 TGFPALFCRHEGLGTVFD--YEPLAV-ILEG-DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQ----AKGP 3758 (3956)
T ss_pred hcccceeeechhhcchhh--hHHHHH-HhCC-CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhc----cCCC
Confidence 344669999997776542 233332 3333 57788888776433121 11234445555555565542 2345
Q ss_pred EEEEEechhhHHHHHHHHhcCCCC-CCCcccccCCCCCCCC
Q psy4317 131 MHVIGFSLGAEIAGFTGKALGTVD-KLPRITGLDPAFPLYG 170 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~~~~~g-~v~rI~~ldPa~p~f~ 170 (235)
.++.|+|+||.++..+++.+...| .+.-+..+|...|.+.
T Consensus 3759 ~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 3799 (3956)
T PRK12467 3759 YGLLGWSLGGTLARLVAELLEREGESEAFLGLFDNTLPLPD 3799 (3956)
T ss_pred eeeeeeecchHHHHHHHHHHHHcCCceeEEEEEeccccccc
Confidence 789999999999998888765444 5555555665555554
No 268
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=42.01 E-value=39 Score=28.65 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=22.5
Q ss_pred HHHHHHhcCCCCcc--EEEEEechhhHHHHHHHHhc
Q psy4317 117 FIRFLQSKGFPLHK--MHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 117 ~l~~l~~~~~~~~~--i~lIGHSlGa~va~~~a~~~ 150 (235)
+++.|.+.++.+.. -.++|-|+||.+|..++...
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCC
Confidence 34455555544222 38999999999998776543
No 269
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=41.95 E-value=24 Score=30.95 Aligned_cols=30 Identities=43% Similarity=0.472 Sum_probs=20.9
Q ss_pred HHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 119 RFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 119 ~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+.|.+.|+ ..-.++|||+|=..|..++..+
T Consensus 76 ~~l~~~Gi--~P~~v~GhSlGE~aA~~aaG~l 105 (318)
T PF00698_consen 76 RLLRSWGI--KPDAVIGHSLGEYAALVAAGAL 105 (318)
T ss_dssp HHHHHTTH--CESEEEESTTHHHHHHHHTTSS
T ss_pred hhhccccc--ccceeeccchhhHHHHHHCCcc
Confidence 33445564 4457899999998888776544
No 270
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.49 E-value=68 Score=27.25 Aligned_cols=32 Identities=25% Similarity=0.207 Sum_probs=22.5
Q ss_pred HHHHHHHhcCCCCccE-EEEEechhhHHHHHHHHh
Q psy4317 116 AFIRFLQSKGFPLHKM-HVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 116 ~~l~~l~~~~~~~~~i-~lIGHSlGa~va~~~a~~ 149 (235)
-+++.|.+.++. ++ .++|-|.||.+|..++..
T Consensus 15 Gvl~al~e~~~~--~fd~i~GtSaGAi~a~~~~~g 47 (266)
T cd07208 15 GVLDAFLEAGIR--PFDLVIGVSAGALNAASYLSG 47 (266)
T ss_pred HHHHHHHHcCCC--CCCEEEEECHHHHhHHHHHhC
Confidence 345555555554 23 789999999999877655
No 271
>KOG0436|consensus
Probab=39.98 E-value=1.1e+02 Score=28.67 Aligned_cols=86 Identities=10% Similarity=0.127 Sum_probs=46.4
Q ss_pred CCCcEEEEEeC-CCCCCCCC--------chHHHHHHHHhcCCeEEEEEeCCCCCCCCchhhhh--cch-HHHHHHHHHHH
Q psy4317 51 RQMTTVFYIHG-FTEQANGE--------SGTTVKDAYLRRGDFNIILVDWSGLSAFPWYTNAA--TNT-HIVGHFIAAFI 118 (235)
Q Consensus 51 ~~~p~vi~iHG-~~~s~~~~--------~~~~l~~~ll~~~~~nVi~vD~~~~~~~~~y~~~~--~~~-~~v~~~l~~~l 118 (235)
-.-|-.|++|| |+-+.-.. -...+++.|-. ..++.+++--...+.+.+|.... ... ..++..+..++
T Consensus 326 lplP~~I~vHghwt~ngmKMsKSLGNvvdP~~l~~kygv-D~vRyflLr~~~l~~Dgdy~eekl~k~~n~~La~~lG~Ll 404 (578)
T KOG0436|consen 326 LPLPKMIFVHGHWTKNGMKMSKSLGNVVDPFELVQKYGV-DAVRYFLLREGELGNDGDYSEEKLIKIVNAHLANTLGNLL 404 (578)
T ss_pred CCCccEEEEeeeeeecceecchhhccccCHHHHHHHhCc-cceeeEeeeccccCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 34677999999 55554321 11233333321 23566666555444446665321 222 35566677777
Q ss_pred HHHHhcCCCCc--cEEEEEec
Q psy4317 119 RFLQSKGFPLH--KMHVIGFS 137 (235)
Q Consensus 119 ~~l~~~~~~~~--~i~lIGHS 137 (235)
..+..+.+.++ ...++++|
T Consensus 405 nRc~gkkln~sn~e~~l~~~s 425 (578)
T KOG0436|consen 405 NRCLGKKLNISNCESTLVVDS 425 (578)
T ss_pred HHHhhcccChhccccccccCC
Confidence 77663333333 47899999
No 272
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=39.81 E-value=44 Score=30.71 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=24.2
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.|+.++ .|.|-|+||.||+.+|.+
T Consensus 101 v~kaL~e~gl~p~--~i~GtS~Gaivaa~~a~~ 131 (391)
T cd07229 101 VVKALWLRGLLPR--IITGTATGALIAALVGVH 131 (391)
T ss_pred HHHHHHHcCCCCc--eEEEecHHHHHHHHHHcC
Confidence 4566666776554 489999999999998875
No 273
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=39.33 E-value=43 Score=28.55 Aligned_cols=26 Identities=31% Similarity=0.317 Sum_probs=18.8
Q ss_pred hcC-CCCccEEEEEechhhHHHHHHHHhc
Q psy4317 123 SKG-FPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 123 ~~~-~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+.+ +. .-.++|||+|=..|..++.-+
T Consensus 78 ~~g~i~--p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 78 EQGGLK--PDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HcCCCC--CCEEeecCHHHHHHHHHhCCC
Confidence 444 54 457999999998888776543
No 274
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.75 E-value=44 Score=28.41 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=21.6
Q ss_pred HHHHHHhcCCC-CccE-EEEEechhhHHHHHHHH
Q psy4317 117 FIRFLQSKGFP-LHKM-HVIGFSLGAEIAGFTGK 148 (235)
Q Consensus 117 ~l~~l~~~~~~-~~~i-~lIGHSlGa~va~~~a~ 148 (235)
+++.|.+.++. .+++ .++|-|+||.+|..++.
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 34455555543 2333 79999999999988763
No 275
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=38.62 E-value=51 Score=29.14 Aligned_cols=31 Identities=23% Similarity=0.299 Sum_probs=22.0
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.++.++ .++|-|.||.+|..++..
T Consensus 87 vl~aL~e~~l~~~--~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 87 VVKALWEQDLLPR--VISGSSAGAIVAALLGTH 117 (298)
T ss_pred HHHHHHHcCCCCC--EEEEEcHHHHHHHHHHcC
Confidence 3444545565443 599999999999988754
No 276
>PRK00889 adenylylsulfate kinase; Provisional
Probab=38.60 E-value=46 Score=26.17 Aligned_cols=40 Identities=10% Similarity=0.267 Sum_probs=28.1
Q ss_pred CCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCC
Q psy4317 52 QMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWS 92 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~ 92 (235)
.++.+|.+.|+.|+..+.....++..+ ...+..+..+|-.
T Consensus 2 ~~g~~i~~~G~~GsGKST~a~~la~~l-~~~g~~v~~id~D 41 (175)
T PRK00889 2 QRGVTVWFTGLSGAGKTTIARALAEKL-REAGYPVEVLDGD 41 (175)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH-HHcCCeEEEEcCc
Confidence 355689999999999876666666544 3346778878643
No 277
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=37.85 E-value=61 Score=28.65 Aligned_cols=19 Identities=21% Similarity=0.055 Sum_probs=16.1
Q ss_pred EEEEechhhHHHHHHHHhc
Q psy4317 132 HVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~ 150 (235)
.+.|-|+||.||..+|..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5899999999999888643
No 278
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.21 E-value=53 Score=30.31 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=22.9
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.++.++ .++|-|.||.+|+.++..
T Consensus 85 VlkaL~e~gllp~--iI~GtSAGAivaalla~~ 115 (407)
T cd07232 85 VVKALLDADLLPN--VISGTSGGSLVAALLCTR 115 (407)
T ss_pred HHHHHHhCCCCCC--EEEEECHHHHHHHHHHcC
Confidence 4555655665443 589999999999988874
No 279
>PF10664 NdhM: Cyanobacterial and plastid NDH-1 subunit M; InterPro: IPR018922 The NADH dehydrogenase I complex shuttles electrons from an unknown electron donor, via FMN and iron-sulphur (Fe-S) centres, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in plants is believed to be plastoquinone. The NADH dehydrogenase I complex couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. This entry represents subunit M of the NADH dehydrogenase I complex in cyanobacteria and plant chloroplasts []. ; GO: 0016655 oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor, 0055114 oxidation-reduction process
Probab=37.16 E-value=32 Score=25.31 Aligned_cols=34 Identities=32% Similarity=0.576 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHHhcC---CCCccEEEEEechh
Q psy4317 105 TNTHIVGHFIAAFIRFLQSKG---FPLHKMHVIGFSLG 139 (235)
Q Consensus 105 ~~~~~v~~~l~~~l~~l~~~~---~~~~~i~lIGHSlG 139 (235)
.+.+.+|.+|..+|+.|.+.| +++ +--+.-+|||
T Consensus 66 YnLRrIGSdLE~~iR~LLq~GeisYNl-~~RVlNySMG 102 (108)
T PF10664_consen 66 YNLRRIGSDLEHFIRSLLQAGEISYNL-DSRVLNYSMG 102 (108)
T ss_pred hhHHHhccHHHHHHHHHHHCCceeeCC-CcceeccccC
Confidence 467899999999999988655 232 3457888988
No 280
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=36.93 E-value=58 Score=29.15 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=22.8
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHh
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~ 149 (235)
+++.|.+.++.++ .+.|-|.||.+|+.++..
T Consensus 86 VlkaL~e~gl~p~--~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 86 VVRTLVEHQLLPR--VIAGSSVGSIVCAIIATR 116 (323)
T ss_pred HHHHHHHcCCCCC--EEEEECHHHHHHHHHHcC
Confidence 4555555666443 599999999999988764
No 281
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=33.52 E-value=2.2e+02 Score=25.70 Aligned_cols=55 Identities=22% Similarity=0.295 Sum_probs=37.9
Q ss_pred CCeEEEEEeCCCCCC-CCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEec
Q psy4317 82 GDFNIILVDWSGLSA-FPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFS 137 (235)
Q Consensus 82 ~~~nVi~vD~~~~~~-~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHS 137 (235)
.+..|+.|++.+.-. ...........+.+.+.|+.|++.|.+.++ .+++.++=.|
T Consensus 244 ~g~~v~~V~~gGwDTH~~~~~~~~~ll~~L~~alaaf~~dL~~~g~-~d~t~vv~~S 299 (392)
T PF07394_consen 244 AGVRVVFVSLGGWDTHSNQGNRHARLLPELDQALAAFIQDLKERGL-LDDTLVVTMS 299 (392)
T ss_pred cCCEEEEECCCCccCccccHhHHHHHHHHHHHHHHHHHHHHHhcCC-cCceEEEEee
Confidence 478999999887422 112233445567888889999999887775 5777776544
No 282
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=33.41 E-value=64 Score=26.67 Aligned_cols=38 Identities=16% Similarity=0.376 Sum_probs=23.6
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeC
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDW 91 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~ 91 (235)
...|.+++.||+.+....... ....+.. ..+.++..+.
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~~--~~~~l~~-~~~~~~~~~~ 84 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSLG--YAVLLAE-KGYRVLAGDA 84 (299)
T ss_pred ccCceEEeccCccccccCcch--HHHHhhh-ceeEEeeecc
Confidence 467789999999998875322 2222333 3566666654
No 283
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=33.35 E-value=1.7e+02 Score=23.64 Aligned_cols=58 Identities=16% Similarity=0.110 Sum_probs=35.9
Q ss_pred CeEEEEEeCCCCCC--CCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEechhhHH
Q psy4317 83 DFNIILVDWSGLSA--FPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFSLGAEI 142 (235)
Q Consensus 83 ~~nVi~vD~~~~~~--~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHSlGa~v 142 (235)
|.+++....+.... ...|.......-..|+.+++.+..|.+.|..++ .|+|||--|-.
T Consensus 20 GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PD--vI~~H~GWGe~ 79 (171)
T PF12000_consen 20 GVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPD--VIIAHPGWGET 79 (171)
T ss_pred CcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCC--EEEEcCCcchh
Confidence 67777777644322 122333233334557778888888887787554 57999876643
No 284
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=32.85 E-value=1.1e+02 Score=25.83 Aligned_cols=44 Identities=11% Similarity=0.137 Sum_probs=28.3
Q ss_pred CCCCcEEEEEeCCCCCCCCC-chHHHHHHHHhcCCeEEEEEeCCCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGE-SGTTVKDAYLRRGDFNIILVDWSGL 94 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~-~~~~l~~~ll~~~~~nVi~vD~~~~ 94 (235)
...+++|.||.=-..+.... +.....+++ +..|..|.-++....
T Consensus 29 ~g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l-~~lg~~v~~L~l~~~ 73 (224)
T COG3340 29 QGKRKTIAFIPTASVDSEDDFYVEKVRNAL-AKLGLEVSELHLSKP 73 (224)
T ss_pred cCCCceEEEEecCccccchHHHHHHHHHHH-HHcCCeeeeeeccCC
Confidence 33478999998766555422 344555544 445899998888764
No 285
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=32.79 E-value=74 Score=24.78 Aligned_cols=31 Identities=23% Similarity=0.110 Sum_probs=20.8
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHH
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTG 147 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a 147 (235)
+++.|.+.++...--++.|-|.||.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 4444544444223347889999999998877
No 286
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=32.20 E-value=2.1e+02 Score=27.98 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcCCCCccEEEEEe------chhhHHHHH-HHHh
Q psy4317 111 GHFIAAFIRFLQSKGFPLHKMHVIGF------SLGAEIAGF-TGKA 149 (235)
Q Consensus 111 ~~~l~~~l~~l~~~~~~~~~i~lIGH------SlGa~va~~-~a~~ 149 (235)
++.+...+..+.. ..++|.++|| ++|+.++.+ +|..
T Consensus 323 aRvis~al~d~i~---e~d~VfImGHk~pDmDalGsAig~~~~A~~ 365 (655)
T COG3887 323 ARVISTALSDIIK---ESDNVFIMGHKFPDMDALGSAIGMQKFASM 365 (655)
T ss_pred HHHHHHHHHHHHh---hcCcEEEEccCCCChHHHHHHHHHHHHHHh
Confidence 3444444443321 3689999999 899999875 4443
No 287
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=31.81 E-value=72 Score=27.16 Aligned_cols=34 Identities=24% Similarity=0.010 Sum_probs=21.0
Q ss_pred HHHHHHhcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 117 FIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 117 ~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+++.|.+.+.....-.++|-|+||.+|..++...
T Consensus 18 Vl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 18 VAVCLKKYAPHLLLNKISGASAGALAACCLLCDL 51 (245)
T ss_pred HHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCC
Confidence 3444444452211123999999999998776543
No 288
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=31.65 E-value=60 Score=27.91 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCC
Q psy4317 56 VFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSG 93 (235)
Q Consensus 56 vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~ 93 (235)
+|.|-|=+|+..+.....++..++++++++|+++|-..
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDp 39 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADP 39 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 46778888887764444546677888679999999876
No 289
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=30.52 E-value=58 Score=28.26 Aligned_cols=41 Identities=2% Similarity=0.012 Sum_probs=29.9
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCC
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWS 92 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~ 92 (235)
...|++|++.||-+++...-...+.. .+.-.+++|.++.-+
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~-~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMS-GVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHH-hcCCCeeEEEeCCCC
Confidence 35699999999999998755555553 344457888888544
No 290
>smart00037 CNX Connexin homologues. Connexin channels participate in the regulation of signaling between developing and differentiated cell types.
Probab=30.47 E-value=28 Score=20.29 Aligned_cols=13 Identities=54% Similarity=0.892 Sum_probs=8.7
Q ss_pred eeecCCCCCCCCCCCc
Q psy4317 206 DFFPNGGFPVQPGCHI 221 (235)
Q Consensus 206 d~y~ngg~~~qpgC~~ 221 (235)
||.=| + .||||..
T Consensus 9 ~FvCn--T-~QPGC~n 21 (34)
T smart00037 9 DFVCN--T-QQPGCEN 21 (34)
T ss_pred hceec--C-CCCCccc
Confidence 44444 4 6999984
No 291
>PRK07877 hypothetical protein; Provisional
Probab=29.31 E-value=54 Score=32.68 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=29.2
Q ss_pred CCccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
...+|.|||-++|+.+|.++++.- -+++|+++|...-.
T Consensus 106 ~~~~V~IvG~GlGs~~a~~LaraG----vvG~l~lvD~D~ve 143 (722)
T PRK07877 106 GRLRIGVVGLSVGHAIAHTLAAEG----LCGELRLADFDTLE 143 (722)
T ss_pred hcCCEEEEEecHHHHHHHHHHHcc----CCCeEEEEcCCEEc
Confidence 457899999999999998888761 24788888776433
No 292
>KOG1578|consensus
Probab=29.06 E-value=33 Score=29.86 Aligned_cols=47 Identities=26% Similarity=0.308 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCcc---cccCCCC
Q psy4317 114 IAAFIRFLQSKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRI---TGLDPAF 166 (235)
Q Consensus 114 l~~~l~~l~~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI---~~ldPa~ 166 (235)
+.-++..| ..++|.++|||.=|.|++.+.-..... ....+ +.+||..
T Consensus 144 lE~aV~~l-----kvenIiv~ghs~cgGik~~m~~~~~~~-~~~f~~~wv~id~~~ 193 (276)
T KOG1578|consen 144 LEYAVTTL-----KVENIIVIGHSLCGGIKGLMSFSLEAP-SRSFIENWVYIDPEA 193 (276)
T ss_pred HHHHHHHh-----ccceEEEeccccCCchhhcccccccCc-chhhhhhheeeChHH
Confidence 44445444 578999999999999999887664322 34444 6777654
No 293
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=27.74 E-value=66 Score=26.45 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=27.8
Q ss_pred EEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCCC
Q psy4317 57 FYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWSG 93 (235)
Q Consensus 57 i~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~~ 93 (235)
+.|=|-+|+..+-....+...++.+.+..++++|+.|
T Consensus 26 ~~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 26 IAIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 5677889888764456666666634579999999987
No 294
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=27.63 E-value=69 Score=27.16 Aligned_cols=42 Identities=10% Similarity=0.144 Sum_probs=30.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeCC
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDWS 92 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~~ 92 (235)
..+.|++|++.||-+++...-...+.. .+.-.+++|.++.-+
T Consensus 27 ~~~~~vlIv~eG~DaAGKg~~I~~l~~-~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 27 ETGARVVIVFEGRDAAGKGGTIKRITE-HLNPRGARVVALPKP 68 (230)
T ss_pred HcCCCEEEEEeCCCCCCchHHHHHHHH-hcCCCeeEEEeCCCC
Confidence 456799999999999988755555544 344457898888754
No 295
>PF03852 Vsr: DNA mismatch endonuclease Vsr; InterPro: IPR004603 This entry represents VSR (very short patch repair) endonucleases, which occur in a variety of bacteria. VSR recognises a TG mismatched base pair, generated after spontaneous deamination of methylated cytosines, and cleaves the phosphate backbone on the 5' side of the thymine []. GT mismatches can lead to C-to-T transition mutations if not repaired. VSR repairs the mismatches in favour of the G-containing strand. In Escherichia coli, this endonuclease nicks double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the thymidine residue, which is mismatched to 2'-deoxyguanosine []. The incision is mismatch-dependent and strand specific. The structure of VSR is similar to the core structure of restriction endonucleases, which have a 3-layer alpha/beta/alpha topology []. ; GO: 0004519 endonuclease activity, 0006298 mismatch repair; PDB: 1ODG_A 1VSR_A 1CW0_A.
Probab=27.22 E-value=37 Score=23.63 Aligned_cols=14 Identities=7% Similarity=0.446 Sum_probs=10.0
Q ss_pred CCCcEEEEEeC--CCC
Q psy4317 51 RQMTTVFYIHG--FTE 64 (235)
Q Consensus 51 ~~~p~vi~iHG--~~~ 64 (235)
+...++||||| |.+
T Consensus 54 ~~~k~aIFVdGCFWHg 69 (75)
T PF03852_consen 54 PKYKIAIFVDGCFWHG 69 (75)
T ss_dssp GGGTEEEEEE-TTTTT
T ss_pred CCCCEEEEEecceeCC
Confidence 35778999999 665
No 296
>PRK03846 adenylylsulfate kinase; Provisional
Probab=27.08 E-value=81 Score=25.49 Aligned_cols=40 Identities=13% Similarity=0.284 Sum_probs=27.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEe
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVD 90 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD 90 (235)
...+|.+|.+.|..|+..+.....+...+... +..++.+|
T Consensus 20 ~~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~-~~~~~~ld 59 (198)
T PRK03846 20 HGHKGVVLWFTGLSGSGKSTVAGALEEALHEL-GVSTYLLD 59 (198)
T ss_pred cCCCCEEEEEECCCCCCHHHHHHHHHHHHHhC-CCCEEEEc
Confidence 44678899999999998765555555444333 56677776
No 297
>smart00400 ZnF_CHCC zinc finger.
Probab=26.78 E-value=59 Score=20.64 Aligned_cols=18 Identities=17% Similarity=0.394 Sum_probs=12.9
Q ss_pred CCCCCCCCceEEEEEcCC
Q psy4317 11 CCPINEPDDITFLLFTRA 28 (235)
Q Consensus 11 ~~~~~~~~~v~f~lyt~~ 28 (235)
+||+.++.+-+|.+..++
T Consensus 4 ~cPfh~d~~pSf~v~~~k 21 (55)
T smart00400 4 LCPFHGEKTPSFSVSPDK 21 (55)
T ss_pred cCcCCCCCCCCEEEECCC
Confidence 477778788888876543
No 298
>KOG3770|consensus
Probab=26.63 E-value=81 Score=30.47 Aligned_cols=28 Identities=21% Similarity=0.249 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechhh
Q psy4317 113 FIAAFIRFLQSKGFPLHKMHVIGFSLGA 140 (235)
Q Consensus 113 ~l~~~l~~l~~~~~~~~~i~lIGHSlGa 140 (235)
.+..++..|.+.....++||++||==.|
T Consensus 343 ~lqWf~~~L~~ae~~GekVhil~HIPpG 370 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGEKVHILGHIPPG 370 (577)
T ss_pred HhhHHHHHHHHHHhcCCEEEEEEeeCCC
Confidence 3888888888544456899999997666
No 299
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=26.58 E-value=73 Score=28.27 Aligned_cols=22 Identities=27% Similarity=0.156 Sum_probs=17.1
Q ss_pred CCccEEEEEechhhHHHHHHHH
Q psy4317 127 PLHKMHVIGFSLGAEIAGFTGK 148 (235)
Q Consensus 127 ~~~~i~lIGHSlGa~va~~~a~ 148 (235)
......+.|||||=.-|..++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4566799999999888776654
No 300
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=26.51 E-value=47 Score=26.47 Aligned_cols=21 Identities=19% Similarity=0.202 Sum_probs=14.7
Q ss_pred EEEEEeCCCCCCCCCchHHHH
Q psy4317 55 TVFYIHGFTEQANGESGTTVK 75 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~~~l~ 75 (235)
+|+++.||.|+..+.....+.
T Consensus 1 Pv~ii~GfLGsGKTTli~~ll 21 (178)
T PF02492_consen 1 PVIIITGFLGSGKTTLINHLL 21 (178)
T ss_dssp -EEEEEESTTSSHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHH
Confidence 588999999999864444443
No 301
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=26.42 E-value=3e+02 Score=23.30 Aligned_cols=88 Identities=18% Similarity=0.113 Sum_probs=43.0
Q ss_pred CCcEEEEEeCCCCCCC-CCchHHHHHHHHhcCCeEEEEEeCCCCC-----C-CCchhhhhcchHHHHH-----HHHHHHH
Q psy4317 52 QMTTVFYIHGFTEQAN-GESGTTVKDAYLRRGDFNIILVDWSGLS-----A-FPWYTNAATNTHIVGH-----FIAAFIR 119 (235)
Q Consensus 52 ~~p~vi~iHG~~~s~~-~~~~~~l~~~ll~~~~~nVi~vD~~~~~-----~-~~~y~~~~~~~~~v~~-----~l~~~l~ 119 (235)
.+|.|+||.=-....+ ..|.....+++ .+.|+.|..++-.... . +.-|... .++-.+.+ .+.+.|+
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af-~~lG~~v~~l~~~~d~~~~l~~ad~I~v~G-Gnt~~l~~~l~~~gl~~~l~ 107 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEAL-APLGIEVTGIHRVADPVAAIENAEAIFVGG-GNTFQLLKQLYERGLLAPIR 107 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHH-HHCCCEEEEeccchhhHHHHhcCCEEEECC-ccHHHHHHHHHHCCcHHHHH
Confidence 5778888875442221 12444444444 4457888888765320 0 0111111 11111111 1223333
Q ss_pred HHHhcCCCCccEEEEEechhhHHHHHH
Q psy4317 120 FLQSKGFPLHKMHVIGFSLGAEIAGFT 146 (235)
Q Consensus 120 ~l~~~~~~~~~i~lIGHSlGa~va~~~ 146 (235)
...+ +...++|-|.||.|++.-
T Consensus 108 ~~~~-----~G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 108 EAVK-----NGTPYIGWSAGANVAGPT 129 (233)
T ss_pred HHHH-----CCCEEEEECHHHHhhhcc
Confidence 2222 236799999999997653
No 302
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.10 E-value=2.9e+02 Score=22.79 Aligned_cols=32 Identities=22% Similarity=0.093 Sum_probs=23.8
Q ss_pred ccEEEEEechhhHHHHHHHHhcCCCCCCCccccc
Q psy4317 129 HKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGL 162 (235)
Q Consensus 129 ~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~l 162 (235)
-+..+-|-||||..|.-.--+.|. ...++++|
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~--lftkvial 132 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPH--LFTKVIAL 132 (227)
T ss_pred CCccccccchhhhhhhhhheeChh--Hhhhheee
Confidence 446789999999888776666676 56666665
No 303
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues. It is about 10 nucleotides shorter than those of Escherichia coli and Salmonella typhimurium [].
Probab=25.69 E-value=47 Score=15.39 Aligned_cols=11 Identities=27% Similarity=0.658 Sum_probs=7.8
Q ss_pred cEEEEEeCCCC
Q psy4317 54 TTVFYIHGFTE 64 (235)
Q Consensus 54 p~vi~iHG~~~ 64 (235)
..+|-+|||.-
T Consensus 2 ~a~~~L~~WWr 12 (14)
T PF08255_consen 2 KATFSLHGWWR 12 (14)
T ss_pred ceEEEEeeEEE
Confidence 35778999864
No 304
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.14 E-value=1.1e+02 Score=26.47 Aligned_cols=19 Identities=26% Similarity=0.039 Sum_probs=16.2
Q ss_pred EEEEechhhHHHHHHHHhc
Q psy4317 132 HVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 132 ~lIGHSlGa~va~~~a~~~ 150 (235)
.++|-|.||.+|..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6899999999998887643
No 305
>PF11181 YflT: Heat induced stress protein YflT
Probab=25.03 E-value=1.2e+02 Score=21.89 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEech
Q psy4317 113 FIAAFIRFLQSKGFPLHKMHVIGFSL 138 (235)
Q Consensus 113 ~l~~~l~~l~~~~~~~~~i~lIGHSl 138 (235)
.+...|+.|...|+..++|+|+.|.=
T Consensus 11 E~~~~I~~L~~~Gy~~ddI~Vva~d~ 36 (103)
T PF11181_consen 11 EALSAIEELKAQGYSEDDIYVVAKDK 36 (103)
T ss_pred HHHHHHHHHHHcCCCcccEEEEEcCc
Confidence 45566777888899999999999843
No 306
>COG4425 Predicted membrane protein [Function unknown]
Probab=23.64 E-value=2.9e+02 Score=26.18 Aligned_cols=60 Identities=23% Similarity=0.163 Sum_probs=34.8
Q ss_pred HHHhcCCeEEEEEeCCCCCC------CCchhhhhcchHHHHHHHHHHHHH-HHhcC-CCCccEEEEEechhhHH
Q psy4317 77 AYLRRGDFNIILVDWSGLSA------FPWYTNAATNTHIVGHFIAAFIRF-LQSKG-FPLHKMHVIGFSLGAEI 142 (235)
Q Consensus 77 ~ll~~~~~nVi~vD~~~~~~------~~~y~~~~~~~~~v~~~l~~~l~~-l~~~~-~~~~~i~lIGHSlGa~v 142 (235)
+|+..+|...+++.|+...+ ..+|. .+.++.|-+.+.. +.+.- -.--|.+|-|-|||++=
T Consensus 343 EyL~~Gd~asVsmQYSyL~SwLSllvdpdyg------~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~ 410 (588)
T COG4425 343 EYLYNGDVASVSMQYSYLPSWLSLLVDPDYG------ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAMG 410 (588)
T ss_pred HHHhCCceEEEEEehhhHHHHHHHhcCCCcc------hhHHHHHHHHHHHHHHhCCcCCCCceEEecccccccc
Confidence 57777888899999887543 12232 2233333333322 22211 12358999999999964
No 307
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=23.62 E-value=1e+02 Score=24.43 Aligned_cols=40 Identities=8% Similarity=0.256 Sum_probs=28.0
Q ss_pred CCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeC
Q psy4317 51 RQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDW 91 (235)
Q Consensus 51 ~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~ 91 (235)
..++.+|.+.|..++..+.+...+...+. ..+..++.+|-
T Consensus 15 ~~~~~~i~i~G~~GsGKstla~~l~~~l~-~~~~~~~~l~~ 54 (184)
T TIGR00455 15 GHRGVVIWLTGLSGSGKSTIANALEKKLE-SKGYRVYVLDG 54 (184)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHH-HcCCcEEEECC
Confidence 35778999999999988666666655443 33567777763
No 308
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=23.44 E-value=3.2e+02 Score=21.86 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=25.7
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHhc---CCeEEEEEeCCCC
Q psy4317 56 VFYIHGFTEQANGESGTTVKDAYLRR---GDFNIILVDWSGL 94 (235)
Q Consensus 56 vi~iHG~~~s~~~~~~~~l~~~ll~~---~~~nVi~vD~~~~ 94 (235)
=++|-|-.++..+.+...+...++.. .+..++++|..+.
T Consensus 40 h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~ 81 (205)
T PF01580_consen 40 HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGS 81 (205)
T ss_dssp SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSS
T ss_pred eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCcc
Confidence 46788888888765555566666552 4799999999865
No 309
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=23.38 E-value=72 Score=26.13 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=26.2
Q ss_pred CCccEEEEEec-hhhHHHHHHHHhcCCCCCCCcccccCCCC
Q psy4317 127 PLHKMHVIGFS-LGAEIAGFTGKALGTVDKLPRITGLDPAF 166 (235)
Q Consensus 127 ~~~~i~lIGHS-lGa~va~~~a~~~~~~g~v~rI~~ldPa~ 166 (235)
...+|.|||-. +|+.++-.++.. -+++|+++|+..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~-----Gv~~i~lvD~d~ 55 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGA-----GVGTIVIVDDDH 55 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHc-----CCCeEEEecCCE
Confidence 45789999975 677777666655 478899999874
No 310
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=23.33 E-value=1e+02 Score=23.29 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=24.0
Q ss_pred cEEEEEec-hhhHHHHHHHHhcCCCCCCCcccccCCCCCCCC
Q psy4317 130 KMHVIGFS-LGAEIAGFTGKALGTVDKLPRITGLDPAFPLYG 170 (235)
Q Consensus 130 ~i~lIGHS-lGa~va~~~a~~~~~~g~v~rI~~ldPa~p~f~ 170 (235)
+|.+||-. +|+.++-.+++. -+++|+.+|+......
T Consensus 1 ~VliiG~GglGs~ia~~L~~~-----Gv~~i~ivD~d~v~~~ 37 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARS-----GVGKITLIDFDTVELS 37 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHC-----CCCEEEEEcCCCcCcc
Confidence 46788865 666666665554 4788999998754433
No 311
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=23.07 E-value=67 Score=24.72 Aligned_cols=38 Identities=11% Similarity=0.129 Sum_probs=24.7
Q ss_pred EEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEE-EEeCCC
Q psy4317 55 TVFYIHGFTEQANGESGTTVKDAYLRRGDFNII-LVDWSG 93 (235)
Q Consensus 55 ~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi-~vD~~~ 93 (235)
++|.|-|+.++..+.....+.+.+..+ +++|. ..|...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~-g~~v~~ik~~~~ 39 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRR-GYRVAVIKHTDH 39 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHT-T--EEEEEE-ST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHc-CCceEEEEEccC
Confidence 478899999888766677777766655 78888 445443
No 312
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=22.78 E-value=1.2e+02 Score=29.21 Aligned_cols=26 Identities=12% Similarity=0.006 Sum_probs=19.4
Q ss_pred hcCCCCccEEEEEechhhHHHHHHHHhc
Q psy4317 123 SKGFPLHKMHVIGFSLGAEIAGFTGKAL 150 (235)
Q Consensus 123 ~~~~~~~~i~lIGHSlGa~va~~~a~~~ 150 (235)
+.|+.+ -.++|||||=..|..++--+
T Consensus 261 ~~GI~P--dav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 261 EFAIKP--DFALGYSKGEASMWASLGVW 286 (538)
T ss_pred hcCCCC--CEEeecCHHHHHHHHHhCCC
Confidence 355544 48999999988888777655
No 313
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=22.52 E-value=2e+02 Score=26.94 Aligned_cols=110 Identities=12% Similarity=0.156 Sum_probs=64.6
Q ss_pred CCCCcEEEEEeCCCCCCCCCchHHHHHHHHhcCCeEEEEEeC---CCCCC-----------CCchhhh-hcchHHHH-HH
Q psy4317 50 NRQMTTVFYIHGFTEQANGESGTTVKDAYLRRGDFNIILVDW---SGLSA-----------FPWYTNA-ATNTHIVG-HF 113 (235)
Q Consensus 50 ~~~~p~vi~iHG~~~s~~~~~~~~l~~~ll~~~~~nVi~vD~---~~~~~-----------~~~y~~~-~~~~~~v~-~~ 113 (235)
+...|+||++-|..|+..+.....++. |+.+.++.|.+|-. |..+- -..|... ..+...++ +.
T Consensus 96 ~~~~P~vImmvGLQGsGKTTt~~KLA~-~lkk~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~a 174 (451)
T COG0541 96 AKKPPTVILMVGLQGSGKTTTAGKLAK-YLKKKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAA 174 (451)
T ss_pred CCCCCeEEEEEeccCCChHhHHHHHHH-HHHHcCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHH
Confidence 467899999999999987665666765 44445777766643 22210 1223221 11122222 22
Q ss_pred HHHHH----------------------HHHH--hcCCCCccEEEEEechhhHHHHHHHHhcCCCCCCCccc
Q psy4317 114 IAAFI----------------------RFLQ--SKGFPLHKMHVIGFSLGAEIAGFTGKALGTVDKLPRIT 160 (235)
Q Consensus 114 l~~~l----------------------~~l~--~~~~~~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~ 160 (235)
+.++- +.+. +.-+.++.+.+|=-||=|+-|...|+.+.+.-.|..++
T Consensus 175 l~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 175 LEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 33222 2222 23467889999999999999999998886521344443
No 314
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=22.50 E-value=87 Score=25.61 Aligned_cols=37 Identities=22% Similarity=0.183 Sum_probs=23.9
Q ss_pred CccEEEEEechhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 128 LHKMHVIGFSLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 128 ~~~i~lIGHSlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
..+|.++| +|| +...+++.+-.. -|++|+.+|+....
T Consensus 21 ~s~VlIiG--~gg-lG~evak~La~~-GVg~i~lvD~d~ve 57 (197)
T cd01492 21 SARILLIG--LKG-LGAEIAKNLVLS-GIGSLTILDDRTVT 57 (197)
T ss_pred hCcEEEEc--CCH-HHHHHHHHHHHc-CCCEEEEEECCccc
Confidence 46899998 444 444444443222 58999999998543
No 315
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=21.82 E-value=1.2e+02 Score=25.13 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=26.4
Q ss_pred CCccEEEEEec-hhhHHHHHHHHhcCCCCCCCcccccCCC
Q psy4317 127 PLHKMHVIGFS-LGAEIAGFTGKALGTVDKLPRITGLDPA 165 (235)
Q Consensus 127 ~~~~i~lIGHS-lGa~va~~~a~~~~~~g~v~rI~~ldPa 165 (235)
...+|.|||-. +|+.++..+++. -+++|+.+|..
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~-----Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARS-----GVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHc-----CCCeEEEEeCC
Confidence 45789999965 788888887765 37788888876
No 316
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=21.73 E-value=22 Score=14.98 Aligned_cols=6 Identities=83% Similarity=1.492 Sum_probs=2.9
Q ss_pred Eechhh
Q psy4317 135 GFSLGA 140 (235)
Q Consensus 135 GHSlGa 140 (235)
|++|||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 455554
No 317
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=21.24 E-value=99 Score=23.22 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=26.8
Q ss_pred ccEEEEEe-chhhHHHHHHHHhcCCCCCCCcccccCCCCCC
Q psy4317 129 HKMHVIGF-SLGAEIAGFTGKALGTVDKLPRITGLDPAFPL 168 (235)
Q Consensus 129 ~~i~lIGH-SlGa~va~~~a~~~~~~g~v~rI~~ldPa~p~ 168 (235)
.+|.|+|= ++|+.++-.+++. -+++|+.+|+..-.
T Consensus 3 ~~v~iiG~G~vGs~va~~L~~~-----Gv~~i~lvD~d~v~ 38 (135)
T PF00899_consen 3 KRVLIIGAGGVGSEVAKNLARS-----GVGKITLVDDDIVE 38 (135)
T ss_dssp -EEEEESTSHHHHHHHHHHHHH-----TTSEEEEEESSBB-
T ss_pred CEEEEECcCHHHHHHHHHHHHh-----CCCceeecCCccee
Confidence 46888998 6899888888877 47889999987543
No 318
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=20.68 E-value=1.1e+02 Score=23.61 Aligned_cols=13 Identities=46% Similarity=0.432 Sum_probs=11.3
Q ss_pred EEEEEechhhHHH
Q psy4317 131 MHVIGFSLGAEIA 143 (235)
Q Consensus 131 i~lIGHSlGa~va 143 (235)
..++|.|.||.|+
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 5799999999884
No 319
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=20.68 E-value=3.3e+02 Score=21.29 Aligned_cols=73 Identities=15% Similarity=0.178 Sum_probs=44.2
Q ss_pred HHHhcCCeEEEEEeCCCCCCCCchhhhhcchHHHHHHHHHHHHHHHhcCCCCccEEEEEec-hhhHHHHHHHHhcCCCCC
Q psy4317 77 AYLRRGDFNIILVDWSGLSAFPWYTNAATNTHIVGHFIAAFIRFLQSKGFPLHKMHVIGFS-LGAEIAGFTGKALGTVDK 155 (235)
Q Consensus 77 ~ll~~~~~nVi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~l~~l~~~~~~~~~i~lIGHS-lGa~va~~~a~~~~~~g~ 155 (235)
.+...+--.|+.++-+.... | +.+..++.|+++++.. ++ ++.|+|+| .|..++.++|.++... .
T Consensus 46 ~~~~~Gad~v~~~~~~~~~~---~-----~~~~~a~al~~~i~~~-----~p-~~Vl~~~t~~g~~la~rlAa~L~~~-~ 110 (168)
T cd01715 46 ALKAYGADKVLVAEDPALAH---Y-----LAEPYAPALVALAKKE-----KP-SHILAGATSFGKDLAPRVAAKLDVG-L 110 (168)
T ss_pred HHHhcCCCEEEEecChhhcc---c-----ChHHHHHHHHHHHHhc-----CC-CEEEECCCccccchHHHHHHHhCCC-c
Confidence 34444445788877543222 1 2344455666666542 33 56777765 5668888999888653 6
Q ss_pred CCcccccCC
Q psy4317 156 LPRITGLDP 164 (235)
Q Consensus 156 v~rI~~ldP 164 (235)
+.-++.++.
T Consensus 111 vtdv~~l~~ 119 (168)
T cd01715 111 ISDVTALED 119 (168)
T ss_pred eeeEEEEcc
Confidence 777777754
No 320
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=20.65 E-value=1e+02 Score=24.40 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=23.2
Q ss_pred cchHHHHHHHHHHHHHHH-hc--CCCCccEEEEEechhhH
Q psy4317 105 TNTHIVGHFIAAFIRFLQ-SK--GFPLHKMHVIGFSLGAE 141 (235)
Q Consensus 105 ~~~~~v~~~l~~~l~~l~-~~--~~~~~~i~lIGHSlGa~ 141 (235)
.+...++..|.++-+.+. +. ...+++|.|||-||+..
T Consensus 77 ~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 77 YSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 455666666655556665 22 34689999999999987
No 321
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.50 E-value=1.5e+02 Score=25.35 Aligned_cols=19 Identities=26% Similarity=0.128 Sum_probs=15.4
Q ss_pred EEEEEechhhHHHHHHHHh
Q psy4317 131 MHVIGFSLGAEIAGFTGKA 149 (235)
Q Consensus 131 i~lIGHSlGa~va~~~a~~ 149 (235)
-.++|-|+||.+|..++..
T Consensus 38 ~~i~G~SAGAl~aa~~a~g 56 (249)
T cd07220 38 RKIYGASAGALTATALVTG 56 (249)
T ss_pred CeEEEEcHHHHHHHHHHcC
Confidence 4689999999999876654
No 322
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=20.10 E-value=2.3e+02 Score=20.13 Aligned_cols=48 Identities=21% Similarity=0.334 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCCCccEEEEEechhhHHHH-HHHHhcCCCCCCCccc-ccCCCCC
Q psy4317 115 AAFIRFLQSKGFPLHKMHVIGFSLGAEIAG-FTGKALGTVDKLPRIT-GLDPAFP 167 (235)
Q Consensus 115 ~~~l~~l~~~~~~~~~i~lIGHSlGa~va~-~~a~~~~~~g~v~rI~-~ldPa~p 167 (235)
+.+++.|.+ .+...+|++-|-+...|+|. .+.+.+ +.++|- ++++..+
T Consensus 30 ~~~~~~l~~-~LG~QdV~V~Gip~~sh~ArvLVeADy----rMKrIg~Gle~~~~ 79 (84)
T PF07643_consen 30 AAWVDGLRQ-ALGPQDVTVYGIPADSHFARVLVEADY----RMKRIGMGLEDSPV 79 (84)
T ss_pred HHHHHHHHH-HhCCceeEEEccCCccHHHHHHHHhhh----HHHHhccCcccCCc
Confidence 334444442 13568899999999999996 455554 344442 5555544
Done!