RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4323
(191 letters)
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein,
membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A
{Homo sapiens}
Length = 164
Score = 44.0 bits (104), Expect = 4e-06
Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 48/148 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y +S + ++W AR CR + D V+++ E E++++ + Y W R
Sbjct: 3 YHYSEK-------PMNWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSRSYY-WIGIR 54
Query: 103 KCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH- 161
K W W G+ + +W G +P+N++ +
Sbjct: 55 KIG--------------GIWTWVGT----NKSLTEEAENW-GDG-----EPNNKKNKEDC 90
Query: 162 ---------------DVACHHLKPFVCE 174
D ACH LK +C
Sbjct: 91 VEIYIKRNKDAGKWNDDACHKLKAALCY 118
>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein;
2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A
Length = 147
Score = 43.6 bits (103), Expect = 5e-06
Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 43/150 (28%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNV--RYIW 98
S F + W ++R+ CR D S+ +E + + + IT + W
Sbjct: 15 TSLCFKLYAKGKHE-KKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKLFW 73
Query: 99 TSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNRE 157
+ + G+ WS GS P + N W A G +P+N +
Sbjct: 74 LGLTYGSPSE------------GFTWSDGS-----PVSYEN---W-AYG-----EPNNYQ 107
Query: 158 AAQH-------------DVACHHLKPFVCE 174
++ D+ C HL ++C+
Sbjct: 108 NVEYCGELKGDPTMSWNDINCEHLNNWICQ 137
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin,
C-type lectin, alpha-helical coiled coil, carbohydrate
recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP:
d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A*
3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A*
2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A*
1b08_A 3g84_A* ...
Length = 177
Score = 43.6 bits (103), Expect = 8e-06
Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 39/131 (29%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ +A+ +C + S + EN ++Q + N + S G
Sbjct: 73 VKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKN-EAAFLSMTDSKTEG------- 124
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----------DV 163
+ + G N W +P++ ++ D
Sbjct: 125 -----KFTYPTGE-----SLVYSN---W------APGEPNDDGGSEDCVEIFTNGKWNDR 165
Query: 164 ACHHLKPFVCE 174
AC + VCE
Sbjct: 166 ACGEKRLVVCE 176
>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET:
GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A
Length = 140
Score = 42.7 bits (101), Expect = 8e-06
Identities = 28/148 (18%), Positives = 43/148 (29%), Gaps = 51/148 (34%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y+FS E + + DA+ C V + + +E +++K+ W
Sbjct: 17 YYFSLE-------KEIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVGRE--SHWIGLT 67
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH 161
W W GS P +N W A QPDN +
Sbjct: 68 DSEQES------------EWKWLDGS-----PVDYKN---WKAG------QPDNWGSGHG 101
Query: 162 ---------------DVACHHLKPFVCE 174
D C + F+CE
Sbjct: 102 PGEDCAGLIYAGQWNDFQCDEINNFICE 129
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane
protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens}
SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Length = 157
Score = 42.4 bits (100), Expect = 1e-05
Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 54/151 (35%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y S E + + +A C++ V+++ +E E++ ++ Y W R
Sbjct: 3 YNTSTE-------AMTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYSPSYY-WIGIR 54
Query: 103 KCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGF---GQAQPDNREAA 159
K N N W W G T +P+NR+
Sbjct: 55 KVN--------------NVWVWVG-------------TQKPLTEEAKNWAPGEPNNRQKD 87
Query: 160 QH----------------DVACHHLKPFVCE 174
+ D C K +C
Sbjct: 88 EDCVEIYIKREKDVGMWNDERCSKKKLALCY 118
>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose,
invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB:
2vuz_A*
Length = 129
Score = 41.9 bits (99), Expect = 2e-05
Identities = 25/145 (17%), Positives = 41/145 (28%), Gaps = 46/145 (31%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITR---GNVRYIWT 99
Y + S + W A++ C+ +T ENE + W
Sbjct: 14 YIYQ-------SAKASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGDAGSFGPWL 66
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAA 159
G+K W WS SGA W +P+N
Sbjct: 67 GGQKVG--------------GAWQWSSSGA---AFDYLR---WGPN------EPNNSGGN 100
Query: 160 QH----------DVACHHLKPFVCE 174
+ D+ CH+ ++C+
Sbjct: 101 EDCLHYNWLSWNDLRCHYQASYLCQ 125
>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin,
toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP:
d.169.1.1 PDB: 1v7p_A*
Length = 134
Score = 41.2 bits (97), Expect = 2e-05
Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 45/146 (30%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRIT---RGNVRYI 97
Y E +W +A C D VS+++ +E FV Q ++ + Y+
Sbjct: 16 YLAIGE-------PQNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFMHRSEIYV 68
Query: 98 WTSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNR 156
W R W+ GS N W + +
Sbjct: 69 WIGLRDRREEQ----------QCNPEWNDGS-----KIIYVN---W------KEGESKMC 104
Query: 157 EAAQH--------DVACHHLKPFVCE 174
+ ++ C L PFVC+
Sbjct: 105 QGLTKWTNFHDWNNINCEDLYPFVCK 130
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system,
membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo
sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A*
1fsb_A
Length = 162
Score = 41.7 bits (98), Expect = 2e-05
Identities = 23/148 (15%), Positives = 44/148 (29%), Gaps = 48/148 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y +S + W +R C+ D V+++ E +++ + + + Y W R
Sbjct: 3 YHYSTKA-------YSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYYSSYY-WIGIR 54
Query: 103 KCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH- 161
K N W W G+ +W+ +P+N+ +
Sbjct: 55 KNN--------------KTWTWVGT----KKALTNEAENWADN------EPNNKRNNEDC 90
Query: 162 ---------------DVACHHLKPFVCE 174
D C K +C
Sbjct: 91 VEIYIKSPSAPGKWNDEHCLKKKHALCY 118
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and
CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Length = 182
Score = 41.0 bits (96), Expect = 5e-05
Identities = 24/145 (16%), Positives = 35/145 (24%), Gaps = 44/145 (30%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y+FS W A C S+ + E EF+ + W
Sbjct: 61 YYFSLIP-------KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIY---WIGLT 110
Query: 103 KCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH- 161
K G W W + R W +P+N +H
Sbjct: 111 KAGMEG------------DWSWVDDTPFNKVQSARF---WIPG------EPNNAGNNEHC 149
Query: 162 ------------DVACHHLKPFVCE 174
D C F+C+
Sbjct: 150 GNIKAPSLQAWNDAPCDKTFLFICK 174
>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein,
membrane, signal-anchor, transmembrane, immune system,
sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A*
3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A*
3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A*
Length = 156
Score = 39.7 bits (93), Expect = 1e-04
Identities = 23/146 (15%), Positives = 36/146 (24%), Gaps = 46/146 (31%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y+FS W A C S+ + E EF+ + W
Sbjct: 35 YYFSLIP-------KTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIY---WIGLT 84
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH 161
K G W W + ++ W +P+N +H
Sbjct: 85 KAGMEG------------DWSWVDDTPF----NKVQSARFWIPG------EPNNAGNNEH 122
Query: 162 -------------DVACHHLKPFVCE 174
D C F+C+
Sbjct: 123 CGNIKAPSLQAWNDAPCDKTFLFICK 148
>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION,
calcium ION, GLA domain, protein binding/blood clotting
complex; HET: CGU; 1.55A {Trimeresurus flavoviridis}
SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A
1ixx_A 1y17_A 1wt9_A 1iod_A*
Length = 129
Score = 39.3 bits (92), Expect = 1e-04
Identities = 28/133 (21%), Positives = 39/133 (29%), Gaps = 38/133 (28%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR---GNVRYIWTSGRKCNFNGCD 110
W DA C VS+E+ E +FV Q +T Y+W R
Sbjct: 20 YKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLR-------- 71
Query: 111 RPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-------- 161
WS GS + N W +A+ +
Sbjct: 72 --VQGKEKQCSSEWSDGS-----SVSYEN---W------IEAESKTCLGLEKETGFRKWV 115
Query: 162 DVACHHLKPFVCE 174
++ C PFVCE
Sbjct: 116 NIYCGQQNPFVCE 128
>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide
complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus
atrox} SCOP: d.169.1.1 PDB: 1muq_A*
Length = 135
Score = 39.3 bits (92), Expect = 1e-04
Identities = 23/151 (15%), Positives = 38/151 (25%), Gaps = 52/151 (34%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR--GNVRYIW 98
Y + W DA CR++ S E+ + + I+ +W
Sbjct: 15 YKIFNQ-------LKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQENVW 67
Query: 99 TSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNRE 157
R + W W+ S T W QPD+ +
Sbjct: 68 IGLRDKKKDF------------SWEWTDRS-----CTDYLT---WDKN------QPDHYQ 101
Query: 158 AAQH--------------DVACHHLKPFVCE 174
+ D C F+C+
Sbjct: 102 NKEFCVELVSLTGYRLWNDQVCESKDAFLCQ 132
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil
granule protein, EMBP; 1.8A {Homo sapiens} SCOP:
d.169.1.1 PDB: 2brs_A*
Length = 117
Score = 38.9 bits (91), Expect = 1e-04
Identities = 21/130 (16%), Positives = 33/130 (25%), Gaps = 36/130 (27%)
Query: 57 VDWLDARNICRR-HCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ A CRR + + VS+ N ++ ++ N +W G
Sbjct: 11 QTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWI--------GGRITGSG 62
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN---------REAAQ-HDVA 164
+ W GS W A QP +
Sbjct: 63 --RCRRFQWVDGS-----RWNFAY---W-AAH-----QPWSRGGHCVALCTRGGYWRRAH 106
Query: 165 CHHLKPFVCE 174
C PF+C
Sbjct: 107 CLRRLPFICS 116
>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis
arietans} SCOP: d.169.1.1 PDB: 1uex_A
Length = 131
Score = 38.5 bits (90), Expect = 2e-04
Identities = 23/144 (15%), Positives = 38/144 (26%), Gaps = 45/144 (31%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITR---GNVRYIWT 99
Y + W DA C + S+++ +E +FV + ++ V W
Sbjct: 16 YKVFKK-------VGTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVYDAWI 68
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREA 158
R D W+ GS N +P
Sbjct: 69 GLR----------DESKTQQCSPQWTDGS-----SVVYENVD-----------EPTKCFG 102
Query: 159 AQH--------DVACHHLKPFVCE 174
D+ C PF+C+
Sbjct: 103 LDVHTEYRTWTDLPCGEKNPFICK 126
>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis
carinatus} SCOP: d.169.1.1
Length = 131
Score = 38.3 bits (89), Expect = 3e-04
Identities = 20/137 (14%), Positives = 39/137 (28%), Gaps = 29/137 (21%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR--GNVRYIW 98
Y E W +A C + D +S+E+ +E V ++ G + IW
Sbjct: 14 YMLFKE-------PKTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENIGKMYKIW 66
Query: 99 TSGRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGF-GQAQPDNRE 157
T + WS + + + + + +
Sbjct: 67 TGLS----------ERSKEQHCSSRWSDG-------SFFRSYEIAIRYSECFVLEKQSVF 109
Query: 158 AAQHDVACHHLKPFVCE 174
C + PF+C+
Sbjct: 110 RTWVATPCENTFPFMCK 126
>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC;
2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A
Length = 184
Score = 39.1 bits (91), Expect = 3e-04
Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 41/142 (28%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
YF S + +W D+ C+ V ++T +E F++ + +R N R+ W
Sbjct: 65 YFMSNS-------QRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSN-RFSWMGLS 116
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN------ 155
N G W W GS P + W +P+N
Sbjct: 117 DLNQEG------------TWQWVDGS-----PLSPSFQRYW------NSGEPNNSGNEDC 153
Query: 156 ---REAAQHDVACHHLKPFVCE 174
+ +D C ++C+
Sbjct: 154 AEFSGSGWNDNRCDVDNYWICK 175
>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin,
galactose-specific, sugar binding protein; 2.00A
{Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB:
1tlg_A*
Length = 125
Score = 37.8 bits (88), Expect = 4e-04
Identities = 22/147 (14%), Positives = 38/147 (25%), Gaps = 42/147 (28%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFV-KQRITRGNVRYIWT 99
+ FS E +++ DA C+ M VS T W
Sbjct: 3 YEILFSDE-------TMNYADAGTYCQSRGMALVSSAMRDSTMVKAILAFTEVKGHDYWV 55
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAA 159
+ W+ G + ++ W + +P N ++
Sbjct: 56 GADNLQDGA-----------YNFLWND-----GVSLPTDSDLW-SPN-----EPSNPQSW 93
Query: 160 QH------------DVACHHLKPFVCE 174
Q DV C + +CE
Sbjct: 94 QLCVQIWSKYNLLDDVGCGGARRVICE 120
>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus,
virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1
Length = 175
Score = 38.3 bits (89), Expect = 5e-04
Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 41/142 (28%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
YF S + +W D+ C+ V +++ +E F++ + +R N R+ W
Sbjct: 39 YFMSNS-------QRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSN-RFTWMGLS 90
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN------ 155
N G W W GS N G +P+N
Sbjct: 91 DLNQEG------------TWQWVDGSPLLPSFKQYWNRG-----------EPNNVGEEDC 127
Query: 156 ---REAAQHDVACHHLKPFVCE 174
+D C+ K ++C+
Sbjct: 128 AEFSGNGWNDDKCNLAKFWICK 149
>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A
{Clupea harengus}
Length = 136
Score = 37.7 bits (88), Expect = 5e-04
Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 47/145 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
+ F+ ++ W DA+ C + + S+ + +E+ FVK+ + + W G
Sbjct: 16 FLFNPL-------QLHWADAQESCMKEGANLASIHSLEESTFVKELTSADLIPS-WIGGT 67
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN------ 155
C + WFW + + W A QPD
Sbjct: 68 DCQVST------------RWFWMDST-----SMDYAD---WCAA------QPDTTLTECC 101
Query: 156 ------REAAQHDVACHHLKPFVCE 174
+D C HL +C
Sbjct: 102 IQMNVGIGKCWNDTPCTHLHSSICA 126
>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin,
cell adhesion; 3.20A {Calloselasma rhodostoma}
Length = 134
Score = 37.4 bits (87), Expect = 5e-04
Identities = 23/133 (17%), Positives = 35/133 (26%), Gaps = 38/133 (28%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRIT---RGNVRYIWTSGRKCNFNGCD 110
W +A C VS+ + E +FV Q +T + Y+W R
Sbjct: 21 PKTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNIKRPELYVWIGLR-------- 72
Query: 111 RPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-------- 161
D + WS + N W + +
Sbjct: 73 --DRRKEQQCSSEWSMSA-----SIIYVN---W------NTGESQMCQGLARWTGFRKWD 116
Query: 162 DVACHHLKPFVCE 174
C PFVC+
Sbjct: 117 YSDCQAKNPFVCK 129
>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet,
sugar-binding protein, activator, snake venom; 2.40A
{Crotalus durissus terrificus} SCOP: d.169.1.1 PDB:
1uos_A
Length = 135
Score = 37.5 bits (87), Expect = 5e-04
Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 45/146 (30%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR---GNVRYI 97
Y E E++W DA C + A VS+++ +E +FV +T+ + ++
Sbjct: 16 YRIFNE-------EMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHV 68
Query: 98 WTSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNR 156
G + WS GS + N
Sbjct: 69 SI--------GLRVQN--KEKQCSTKWSDGS-----SVSYDN---L------LDLYITKC 104
Query: 157 EAAQH--------DVACHHLKPFVCE 174
+ +C PFVC+
Sbjct: 105 SLLKKETGFRKWFVASCIGKIPFVCK 130
>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor)
(FC-epsilon-RII)...; C-type lectin, calcium-bound,
lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A
1t8d_A
Length = 175
Score = 37.8 bits (88), Expect = 6e-04
Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 49/145 (33%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y+F W+ AR C VS+ +P+E +F+ +R + W R
Sbjct: 29 YYFGKGT-------KQWVHARYACDDMEGQLVSIHSPEEQDFLTKRASHTGS---WIGLR 78
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH 161
+ G + W GS N W+ +P +R ++
Sbjct: 79 NLDLKG------------EFIWVDGS-----HVDYSN---WAPG------EPTSRSQSED 112
Query: 162 -----------DVACH-HLKPFVCE 174
D C L +VC+
Sbjct: 113 CVMMRGSGRWNDAFCDRKLGAWVCD 137
>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding,
mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A*
2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*
Length = 170
Score = 37.9 bits (88), Expect = 6e-04
Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 41/142 (28%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
YF S + +W D+ C+ V +++ +E F++ + +R N R+ W
Sbjct: 34 YFMSNS-------QRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSN-RFTWMGLS 85
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN------ 155
N G W W GS N G +P+N
Sbjct: 86 DLNQEG------------TWQWVDGSPLLPSFKQYWNRG-----------EPNNVGEEDC 122
Query: 156 ---REAAQHDVACHHLKPFVCE 174
+D C+ K ++C+
Sbjct: 123 AEFSGNGWNDDKCNLAKFWICK 144
>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin,
calcium-binding protein; HET: MMA; 1.70A {Rattus rattus}
SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1*
1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1*
1kze_1*
Length = 113
Score = 36.5 bits (85), Expect = 9e-04
Identities = 17/134 (12%), Positives = 33/134 (24%), Gaps = 42/134 (31%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ A+ +C + +EN ++ +
Sbjct: 10 RMPLNRAKALCSELQGTVATPRNAEENRAIQNVAK----DVAFLGITDQRTEN------- 58
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----------DV 163
+ G+ N W + +P+N + ++ DV
Sbjct: 59 -----VFEDLTGN-----RVRYTN---W------NEGEPNNVGSGENCVVLLTNGKWNDV 99
Query: 164 ACHHLKPFVCEDSD 177
C VCE SD
Sbjct: 100 PCSDSFLVVCEFSD 113
>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin;
2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Length = 141
Score = 37.0 bits (86), Expect = 9e-04
Identities = 17/131 (12%), Positives = 33/131 (25%), Gaps = 42/131 (32%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ + + +C + + EN ++ I + G
Sbjct: 38 IMTFEKVKALCVKFQASVATPRNAAENGAIQNLIK----EEAFLGITDEKTEG------- 86
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----------DV 163
+ G+ T N W+ +P+N + + DV
Sbjct: 87 -----QFVDLTGN-----RLTYTN---WNEG------EPNNAGSDEDCVLLLKNGQWNDV 127
Query: 164 ACHHLKPFVCE 174
C VCE
Sbjct: 128 PCSTSHLAVCE 138
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin,
toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB:
1uex_B
Length = 125
Score = 36.6 bits (85), Expect = 0.001
Identities = 21/128 (16%), Positives = 35/128 (27%), Gaps = 36/128 (28%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWTSGRKCNFNGCDRP 112
E W DA C+ +S+ + +E EF+ + + +W
Sbjct: 22 EKTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKMRIVLVWIGLSHFWRIC---- 77
Query: 113 DLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----DVACH 166
W+ G+ R S +P A C+
Sbjct: 78 --------PLRWTDGA-----RLDYRA---LSD-------EPICFVAESFHNKWIQWTCN 114
Query: 167 HLKPFVCE 174
K FVC+
Sbjct: 115 RKKSFVCK 122
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate
binding, lectin, mannose, sugar BIND protein; 1.80A
{Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A
3pak_A
Length = 148
Score = 36.6 bits (85), Expect = 0.002
Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 40/131 (30%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
V++ + +C R + TP+ENE + + N Y++ + G
Sbjct: 45 SVNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYN-NYVYLGMIEDQTPG------- 96
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----------DV 163
+ + G+ + N W +P + + D
Sbjct: 97 -----DFHYLDGA-----SVSYTN---W------YPGEPRGQG-KEKCVEMYTDGTWNDR 136
Query: 164 ACHHLKPFVCE 174
C + VCE
Sbjct: 137 GCLQYRLAVCE 147
>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type
lectin, metal- binding, loop exchanged dimer, toxin;
1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C
1u0n_C 1u0o_B
Length = 125
Score = 36.2 bits (84), Expect = 0.002
Identities = 22/136 (16%), Positives = 36/136 (26%), Gaps = 31/136 (22%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWT 99
Y F E + W DA C A VS ++ +E +FV+ + +W
Sbjct: 14 YRFFKE-------WMHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEMLKGDVVWI 66
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREA 158
+ W+ G + + +
Sbjct: 67 GLSDVWNKC------------RFEWTDGM-----EFDYDD---YYLIAEYECVASKPTNN 106
Query: 159 AQHDVACHHLKPFVCE 174
+ C K FVCE
Sbjct: 107 KWWIIPCTRFKNFVCE 122
>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin,
metalloproteinase, C-type lectin, hydrolase, BL
clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia
russellii siamensis}
Length = 134
Score = 36.3 bits (84), Expect = 0.002
Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 38/133 (28%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRI---TRGNVRYIWTSGRKCNFNGCD 110
W A C H + VS+E+ +E EFV + + T + + W G
Sbjct: 21 HKTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTTGKFITHFWI--------GLM 72
Query: 111 RPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-------- 161
D + WS GS + G+ + +
Sbjct: 73 IKDKE--QECSSEWSDGS-----SVSYDK---L------GKQEFRKCFVLEKESGYRMWF 116
Query: 162 DVACHHLKPFVCE 174
+ C FVC+
Sbjct: 117 NRNCEERYLFVCK 129
>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin,
carbohydrate recognition domain; 2.00A {Homo sapiens}
SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C
Length = 137
Score = 35.8 bits (83), Expect = 0.002
Identities = 20/134 (14%), Positives = 35/134 (26%), Gaps = 38/134 (28%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITR--GNVRYIWTSGRKCNFNGCDRPD 113
+ +A C + +T EN+ + + + + GN IW G
Sbjct: 23 TKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEG----- 77
Query: 114 LQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ------------ 160
W G+ +N QPD +
Sbjct: 78 -------TWVDMTGA-----RIAYKNWETEITA------QPDGGKTENCAVLSGAANGKW 119
Query: 161 HDVACHHLKPFVCE 174
D C P++C+
Sbjct: 120 FDKRCRDQLPYICQ 133
>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB:
2vrp_A
Length = 136
Score = 35.9 bits (83), Expect = 0.002
Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 39/134 (29%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITRGNV----RYIWTSGRKCNFNGC 109
+ W +A CR A S+E+ E +FV I++ + Y+W R
Sbjct: 23 QKTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLR------- 75
Query: 110 DRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH------- 161
WS GS + N A +
Sbjct: 76 ---AQNKEQQCSSEWSDGS-----SVSYEN---L------IDLHTKKCGALEKLTGFRKW 118
Query: 162 -DVACHHLKPFVCE 174
+ C + FVC+
Sbjct: 119 VNYYCEQMHAFVCK 132
>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted,
inflammatory response, acute phase; 1.78A {Homo sapiens}
SCOP: d.169.1.1 PDB: 2go0_A
Length = 149
Score = 35.9 bits (83), Expect = 0.002
Identities = 27/132 (20%), Positives = 42/132 (31%), Gaps = 30/132 (22%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR--GNVRYIWTSGRKCNFNGCDR 111
W DA C++ VS+ + E FV + + Y+W D
Sbjct: 32 PKSWTDADLACQKR-PSGNLVSVLSGAEGSFVSSLVKSIGNSYSYVWIGLH-------DP 83
Query: 112 PDLQPANVNGWFWS-GSGA-----KIGPTTQRNTGD---WSATGGFGQAQPDNREAAQHD 162
N GW WS + P+T + G S + F + D
Sbjct: 84 TQGTEPNGEGWEWSSSDVMNYFAWERNPSTISSPGHCASLSRSTAFLR---------WKD 134
Query: 163 VACHHLKPFVCE 174
C+ P+VC+
Sbjct: 135 YNCNVRLPYVCK 146
>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV,
disulfide bond, glycoPro lectin, secreted, sugar binding
protein; NMR {Homo sapiens}
Length = 131
Score = 35.8 bits (83), Expect = 0.002
Identities = 20/147 (13%), Positives = 39/147 (26%), Gaps = 48/147 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWT 99
Y + + +W DA C+ + A S+ + +E + + I+ + IW
Sbjct: 15 YGYFRK-------LRNWSDAELECQSYGNGAHLASILSLKEASTIAEYISGYQRSQSIWI 67
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNRE- 157
W W G+ R+ WS +
Sbjct: 68 GLHDPQKRQ------------QWQWIDGA-----MYLYRS---WSG------KSMGGNKH 101
Query: 158 ----------AAQHDVACHHLKPFVCE 174
C+ + F+C+
Sbjct: 102 CAEMSSNNNFLTWSSNECNKRQHFLCK 128
>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane
protein; 2.50A {Trimeresurus flavoviridis} SCOP:
d.169.1.1 PDB: 1v4l_A
Length = 135
Score = 35.9 bits (83), Expect = 0.002
Identities = 23/133 (17%), Positives = 37/133 (27%), Gaps = 38/133 (28%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR---GNVRYIWTSGRKCNFNGCD 110
+W DA + C + VS+E+ E +FV Q + + +Y+W R
Sbjct: 22 PKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKIKTSFQYVWIGLR-------- 73
Query: 111 RPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN-----REAAQH--- 161
WS S N + +
Sbjct: 74 --IQNKEQQCRSEWSDAS-----SVNYEN---LV------KQFSKKCYALKKGTELRTWF 117
Query: 162 DVACHHLKPFVCE 174
+V C P VC+
Sbjct: 118 NVYCGTENPEVCK 130
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling
protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Length = 128
Score = 35.1 bits (81), Expect = 0.003
Identities = 30/149 (20%), Positives = 41/149 (27%), Gaps = 53/149 (35%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y+FS W DA N CR V + + +E +FV+ I N W
Sbjct: 13 YWFSRS-------GKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNT---WMGLH 62
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH 161
N W W G+ + G +W QPD+
Sbjct: 63 DQN--------------GPWKWVDGTDYETGFK------NW------RPEQPDDWYGHGL 96
Query: 162 ----------------DVACHHLKPFVCE 174
D C +VCE
Sbjct: 97 GGGEDCAHFTDDGRWNDDVCQRPYRWVCE 125
>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell
structural protein, phosphoprotein, sugar-binding
protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus}
SCOP: d.169.1.1
Length = 142
Score = 35.6 bits (82), Expect = 0.003
Identities = 22/151 (14%), Positives = 36/151 (23%), Gaps = 47/151 (31%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITRGNVRYIWTS 100
F E+ W A + CRR + ++ + E + + +
Sbjct: 17 LGFFSR-------ELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNASRGGDGSGE 69
Query: 101 GRKCNF----NGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN 155
G + +PA W WS G+ + W T
Sbjct: 70 GADGRVWIGLH-------RPAGSRSWRWSDGT-----APRFAS---WHRT------AKAR 108
Query: 156 R-----EAAQH-------DVACHHLKPFVCE 174
R C FVC+
Sbjct: 109 RGGRCAALRDEEAFTSWAARPCTERNAFVCK 139
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB:
2vrp_B
Length = 146
Score = 35.5 bits (82), Expect = 0.003
Identities = 23/143 (16%), Positives = 40/143 (27%), Gaps = 47/143 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRIT-RGNVRYIWT 99
Y E +W DA C+ + VS ++ +E +FV + R +W
Sbjct: 37 YKPFNE-------PKNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRPRLKANLVWM 89
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDW-------SATGGFGQA 151
W WS G+ ++ W + G +
Sbjct: 90 GLSNIWHGC------------NWQWSDGA-----RLNYKD---WQEQSECLAFRGVHTEW 129
Query: 152 QPDNREAAQHDVACHHLKPFVCE 174
++ C FVC+
Sbjct: 130 ---------LNMDCSSTCSFVCK 143
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus
rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Length = 115
Score = 34.9 bits (81), Expect = 0.004
Identities = 14/131 (10%), Positives = 34/131 (25%), Gaps = 42/131 (32%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ + + +C +EN+ +++ + G
Sbjct: 12 RMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK----TSAFLGITDEVTEG------- 60
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----------DV 163
+ + G T N W + +P++ + + D+
Sbjct: 61 -----QFMYVTGG-----RLTYSN---W------KKDEPNDHGSGEDCVTIVDNGLWNDI 101
Query: 164 ACHHLKPFVCE 174
+C VCE
Sbjct: 102 SCQASHTAVCE 112
>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin,
toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP:
d.169.1.1 PDB: 1v7p_B*
Length = 128
Score = 35.1 bits (81), Expect = 0.004
Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 24/123 (19%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWTSGRKCNFNGCDRP 112
+W +A IC + + S+ + +E FV + ++ +W +
Sbjct: 19 VKNWTEAEEICMQQHKGSRLASIHSSEEEAFVSKLASKALKFTSMWIGLNNPWKDC---- 74
Query: 113 DLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPF 171
W WS + + W C F
Sbjct: 75 --------KWEWSDNA-----RFDYKA---WKRRPYCTVMVVKPDRIFWFTRGCEKSVSF 118
Query: 172 VCE 174
VC+
Sbjct: 119 VCK 121
>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet,
sugar-binding protein, activator, snake venom; 2.40A
{Crotalus durissus terrificus} SCOP: d.169.1.1 PDB:
1uos_B
Length = 125
Score = 34.7 bits (80), Expect = 0.004
Identities = 22/136 (16%), Positives = 36/136 (26%), Gaps = 33/136 (24%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWT 99
Y + E+ W DA C + + VS + +E +FV + + + W
Sbjct: 16 YKVFKQ-------EMTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTHQSLKSTFFWI 68
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREA 158
W WS G+ + W F +
Sbjct: 69 GANNIWNKC------------NWQWSDGT-----KPEYKE---WH--EEFECLISRTFDN 106
Query: 159 AQHDVACHHLKPFVCE 174
C FVC+
Sbjct: 107 QWLSAPCSDTYSFVCK 122
>1buu_A Protein (mannose-binding protein A); lectin, HOST defense,
metalloprotein, sugar binding protein; 1.90A {Rattus
norvegicus} SCOP: d.169.1.1 h.1.1.1
Length = 168
Score = 35.1 bits (81), Expect = 0.005
Identities = 14/131 (10%), Positives = 33/131 (25%), Gaps = 42/131 (32%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ + + +C +EN+ +++ + G
Sbjct: 65 RMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK----TSAFLGITDEVTEG------- 113
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----------DV 163
+ + G T N W +P++ + + D+
Sbjct: 114 -----QFMYVTGG-----RLTYSN---W-KKD-----EPNDHGSGEDCVTIVDNGLWNDI 154
Query: 164 ACHHLKPFVCE 174
+C VCE
Sbjct: 155 SCQASHTAVCE 165
>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type
lectin, metal- binding, loop exchanged dimer, toxin;
1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B
1u0n_B 1u0o_A
Length = 133
Score = 34.7 bits (80), Expect = 0.005
Identities = 26/147 (17%), Positives = 44/147 (29%), Gaps = 46/147 (31%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLET-PQENEFVKQRITR---GNVRY 96
Y F + +++W DA C VS++ +E +FV +T+ + Y
Sbjct: 14 YKFFQQ-------KMNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNIQSSDLY 66
Query: 97 IWTSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN 155
W G + WS GS + N +
Sbjct: 67 AWI--------GLRVEN--KEKQCSSEWSDGS-----SVSYEN---V------VERTVKK 102
Query: 156 REAAQH--------DVACHHLKPFVCE 174
A + ++ C PFVC+
Sbjct: 103 CFALEKDLGFVLWINLYCAQKNPFVCK 129
>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type
lectin, N-acetylgalactosamine, invertebrate, sugar
binding protein; HET: NGA A2G; 1.70A {Cucumaria
echinata} SCOP: d.169.1.1 PDB: 1wmy_A*
Length = 140
Score = 34.7 bits (80), Expect = 0.005
Identities = 22/155 (14%), Positives = 37/155 (23%), Gaps = 56/155 (36%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA-------VSLETPQENEFVKQRITR--GN 93
Y F W +A + C + VS+ + E +V
Sbjct: 15 YRFFNTL-------TTWENAHHECVSYSCSTLNVRSDLVSVHSAAEQAYVFNYWRGIDSQ 67
Query: 94 VRYIWTSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQ 152
+W G + W+ GS W+ Q
Sbjct: 68 AGQLWIGLYDKYNEG------------DFIWTDGS-----KVGYTK---WAGG------Q 101
Query: 153 PDNREAAQH-------------DVACHHLKPFVCE 174
PDN A+ D + ++C+
Sbjct: 102 PDNWNNAEDYGQFRHTEGGAWNDNSAAAQAKYMCK 136
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP:
d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A*
1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1*
2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1*
1fif_A 1fih_A*
Length = 149
Score = 34.6 bits (80), Expect = 0.006
Identities = 14/131 (10%), Positives = 34/131 (25%), Gaps = 42/131 (32%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ + + +C +EN+ +++ + G
Sbjct: 46 RMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAK----TSAFLGITDEVTEG------- 94
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH-----------DV 163
+ + G T N W + +P++ + + D+
Sbjct: 95 -----QFMYVTGG-----RLTYSN---W------KKDEPNDHGSGEDCVTIVDNGLWNDI 135
Query: 164 ACHHLKPFVCE 174
+C VCE
Sbjct: 136 SCQASHTAVCE 146
>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane
protein; 2.50A {Trimeresurus flavoviridis} SCOP:
d.169.1.1 PDB: 1v4l_B
Length = 125
Score = 34.3 bits (79), Expect = 0.006
Identities = 21/136 (15%), Positives = 38/136 (27%), Gaps = 33/136 (24%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWT 99
Y + +++W DA C + + VS + +E +FV + ++W
Sbjct: 16 YQVFQQ-------KMNWEDAEKFCTQQHKGSHLVSFHSSEEVDFVTSKTFPILKYDFVWI 68
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREA 158
WS G+ + WS GG +
Sbjct: 69 GLSNVWNEC------------TKEWSDGT-----KLDYKA---WS--GGSDCIVSKTTDN 106
Query: 159 AQHDVACHHLKPFVCE 174
+ C VC+
Sbjct: 107 QWLSMDCSSKYYVVCK 122
>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin;
1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB:
3gpr_B
Length = 129
Score = 34.3 bits (79), Expect = 0.007
Identities = 18/124 (14%), Positives = 35/124 (28%), Gaps = 26/124 (20%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR---GNVRYIWTSGRKCNFNGCD 110
+ W++A C + + VS+ + E +F+ I WT + N +
Sbjct: 22 KKTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNFDKQRYRAWTGLTERNLKWTN 81
Query: 111 RPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKP 170
A+V+ R G + + C
Sbjct: 82 G-----ASVSYENL-------YEPYIRKCFVVQPWEGKSKW---------YKADCEEKNA 120
Query: 171 FVCE 174
F+C+
Sbjct: 121 FLCK 124
>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW
YORK structural genomics research consortium, nysgrc,
PSI-biology, immune system; NMR {Homo sapiens}
Length = 156
Score = 34.7 bits (80), Expect = 0.007
Identities = 23/146 (15%), Positives = 39/146 (26%), Gaps = 47/146 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
YF + W ++ C +++ T E F+ Q + + R
Sbjct: 15 YFPLTD-------NKTWAESERNCSGMGAHLMTISTEAEQNFIIQFL--DRRLSYFLGLR 65
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ- 160
N G W W + P R W +PDN +
Sbjct: 66 DENAKG------------QWRWVDQT-----PFNPRRV-FWHKN------EPDNSQGENC 101
Query: 161 ------------HDVACHHLKPFVCE 174
+DV C+ +C+
Sbjct: 102 VVLVYNQDKWAWNDVPCNFEASRICK 127
>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA
raven protein, solution backbone fold, C- type lectin;
NMR {Hemitripterus americanus} SCOP: d.169.1.1
Length = 129
Score = 34.2 bits (79), Expect = 0.008
Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 50/145 (34%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
++ + W A C + S+ + +E+ F++ +W G
Sbjct: 19 IYYETT-------AMTWALAETNCMKLGGHLASIHSQEEHSFIQTLNAG----VVWIGGS 67
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN------ 155
C G W WS G+ P R+ W +T +PD+
Sbjct: 68 ACLQAG------------AWTWSDGT-----PMNFRS---WCST------KPDDVLAACC 101
Query: 156 ---REAAQH---DVACHHLKPFVCE 174
AA D+ C VC
Sbjct: 102 MQMTAAADQCWDDLPCPASHKSVCA 126
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A
{Brachyopsis rostratus}
Length = 133
Score = 34.3 bits (79), Expect = 0.008
Identities = 21/145 (14%), Positives = 39/145 (26%), Gaps = 50/145 (34%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
++ + W A C S+ + +E ++K + +W G
Sbjct: 22 FYSEAT-------AMTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVAG----IVWIGGS 70
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN------ 155
C G W W+ G+ P R W T +P++
Sbjct: 71 ACKVAG------------AWSWTDGT-----PVDYRT---WCPT------KPNDILSDCC 104
Query: 156 ----REAAQH--DVACHHLKPFVCE 174
+ D+ C +C
Sbjct: 105 MQMTAAVDKCWDDLPCPASHASICA 129
>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin,
dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding;
1.91A {Deinagkistrodon acutus}
Length = 126
Score = 33.9 bits (78), Expect = 0.008
Identities = 23/144 (15%), Positives = 38/144 (26%), Gaps = 48/144 (33%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWT 99
Y E + W DA C VS+ + +E +F+ ++ IW
Sbjct: 16 YLVVKE-------KKTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPILDLSLIWM 68
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDW--------SATGGFGQ 150
+ WS G+ ++ W T G Q
Sbjct: 69 GLSNMWNDC------------KREWSDGT-----KLDFKS---WAKTSDCLIGKTDGDNQ 108
Query: 151 AQPDNREAAQHDVACHHLKPFVCE 174
++ C FVC+
Sbjct: 109 ---------WLNMDCSKKHYFVCK 123
>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled
coil, C-type lectin, carbohydrate recognition domain;
2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Length = 182
Score = 34.8 bits (80), Expect = 0.008
Identities = 20/134 (14%), Positives = 35/134 (26%), Gaps = 38/134 (28%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITR--GNVRYIWTSGRKCNFNGCDRPD 113
+ +A C + +T EN+ + + + + GN IW G
Sbjct: 68 TKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEG----- 122
Query: 114 LQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ------------ 160
W G+ +N QPD +
Sbjct: 123 -------TWVDMTGA-----RIAYKNWETEITA------QPDGGKTENCAVLSGAANGKW 164
Query: 161 HDVACHHLKPFVCE 174
D C P++C+
Sbjct: 165 FDKRCRDQLPYICQ 178
>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin,
metalloproteinase, C-type lectin, hydrolase, BL
clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia
russellii siamensis}
Length = 122
Score = 33.9 bits (78), Expect = 0.008
Identities = 19/139 (13%), Positives = 34/139 (24%), Gaps = 39/139 (28%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWT 99
Y + +W DA C + VSL + +E +FV I+ W
Sbjct: 15 YKGFND-------LKNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENLEYPATWI 67
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGD----WSATGGFGQAQPDN 155
+ WS + + +
Sbjct: 68 GLGNMWKDC------------RMEWS-DRGNVKYKALAEESYCLIMITHEKVW------- 107
Query: 156 REAAQHDVACHHLKPFVCE 174
+ C+ + P VC+
Sbjct: 108 -----KSMTCNFIAPVVCK 121
>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins,
protein-protein interactions, C-type lectin domain;
2.60A {Rattus norvegicus} SCOP: d.169.1.1
Length = 130
Score = 33.8 bits (78), Expect = 0.011
Identities = 31/147 (21%), Positives = 41/147 (27%), Gaps = 52/147 (35%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y + W+DA CR S+ TP+E EFV + Y W
Sbjct: 19 YRHFPD-------RETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQD----YQWIGLN 67
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ- 160
G + WS G W QPDN A
Sbjct: 68 DRTIEG------------DFRWSDGH-----SLQFEK---WRPN------QPDNFFATGE 101
Query: 161 -------------HDVACHHLKPFVCE 174
+DV C++ PF C+
Sbjct: 102 DCVVMIWHERGEWNDVPCNYQLPFTCK 128
>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein;
HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1
PDB: 1lit_A
Length = 144
Score = 33.9 bits (78), Expect = 0.012
Identities = 30/151 (19%), Positives = 45/151 (29%), Gaps = 54/151 (35%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA---VSLETPQENEFVKQRITR--GNVRYI 97
Y+F+ + W+DA C+ M++ VS+ T E FV I + +
Sbjct: 26 YYFNEDR-------ETWVDADLYCQN--MNSGNLVSVLTQAEGAFVASLIKESGTDDFNV 76
Query: 98 WTSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNR 156
W N W WS GS + ++ W G P +
Sbjct: 77 WIGLHDPKKNR------------AWHWSSGS-----LVSYKS---W------GIGAPSSV 110
Query: 157 EAAQH-------------DVACHHLKPFVCE 174
DV C FVC+
Sbjct: 111 NPGYCVSLTSSTGFQKWKDVPCEDKFSFVCK 141
>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis
carinatus} SCOP: d.169.1.1
Length = 123
Score = 33.1 bits (76), Expect = 0.016
Identities = 20/123 (16%), Positives = 33/123 (26%), Gaps = 26/123 (21%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRIT-RGNVRYIWTSGRKCNFNGCDRP 112
++W DA C + D VS +E +FV +W +
Sbjct: 20 RMNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLAFPMLKNDLVWIGLTDYWRDC---- 75
Query: 113 DLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPF 171
W WS G+ + W + + + C F
Sbjct: 76 --------NWEWSDGA-----QLDYKA---WDNERHCFIYKNTDNQ--WTRRDCTWTFSF 117
Query: 172 VCE 174
VC+
Sbjct: 118 VCK 120
>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin;
1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB:
3gpr_A
Length = 133
Score = 33.2 bits (76), Expect = 0.020
Identities = 24/146 (16%), Positives = 37/146 (25%), Gaps = 45/146 (30%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRIT---RGNVRYI 97
Y E + W +A C +A VS+E E FV + +
Sbjct: 14 YRPFKE-------KKTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMENNFENKIYRS 66
Query: 98 WTSGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGD--------WSATGGF 148
W G + + WS GS + N + G
Sbjct: 67 WI--------GLKIENKG--QRSNLEWSDGS-----SISYENLYEPYMEKCFLMDHQSGL 111
Query: 149 GQAQPDNREAAQHDVACHHLKPFVCE 174
+ H C F+C+
Sbjct: 112 PKW---------HTADCEEKNVFMCK 128
>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin,
cell adhesion; 3.20A {Calloselasma rhodostoma}
Length = 124
Score = 32.8 bits (75), Expect = 0.021
Identities = 18/136 (13%), Positives = 33/136 (24%), Gaps = 31/136 (22%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWT 99
Y E W DA + C + S+ + +E FV + ++ +W
Sbjct: 13 YRVFSE-------LKTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTLKYTSMWL 65
Query: 100 SGRKCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREA 158
W WS + + W
Sbjct: 66 GLNNAWAAC------------KWEWSDDA-----KLDYKV---WLRRAYCAVMVVKTDRI 105
Query: 159 AQHDVACHHLKPFVCE 174
++ C F+C+
Sbjct: 106 FWYNRGCEKTVSFLCK 121
>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin,
dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding;
1.91A {Deinagkistrodon acutus}
Length = 131
Score = 32.8 bits (75), Expect = 0.021
Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 36/128 (28%)
Query: 59 WLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWTSGRKCNFNGCDRPDLQ 115
W DA C VS+E+ E +FV Q ++ +W + +
Sbjct: 25 WDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSENKQTDNVWLGLKIQSKG-------- 76
Query: 116 PANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDN-----REAAQH---DVACH 166
W+ GS + N +S + Q + ++ C
Sbjct: 77 --QQCSTEWTDGS-----SVSYEN---FS------EYQSKKCFVLEKNTGFRTWLNLNCG 120
Query: 167 HLKPFVCE 174
FVC+
Sbjct: 121 SEYSFVCK 128
>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION,
calcium ION, GLA domain, protein binding/blood clotting
complex; HET: CGU; 1.55A {Trimeresurus flavoviridis}
SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B*
1x2w_B 1wt9_B 1iod_B 1y17_B
Length = 123
Score = 32.7 bits (75), Expect = 0.023
Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 40/130 (30%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITR-GNVRYIWTSGRKCNFNGCDRP 112
+W DA N C + VS ++ +E +FV + + W
Sbjct: 20 PKNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFGHSIFWMGLSNVWNQC---- 75
Query: 113 DLQPANVNGWFWS-GSGAKIGPTTQRNTGD-------WSATGGFGQAQPDNREAAQHDVA 164
W WS + + + S + A
Sbjct: 76 --------NWQWSNAA-----MLRYKAWAEESYCVYFKSTNNKW------------RSRA 110
Query: 165 CHHLKPFVCE 174
C + FVCE
Sbjct: 111 CRMMAQFVCE 120
>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type
lectin-like domain, CTLD, carbohydrate; 1.5A {Mus
musculus} PDB: 2bph_A 2bpe_A 2cl8_A*
Length = 142
Score = 32.4 bits (74), Expect = 0.038
Identities = 19/142 (13%), Positives = 38/142 (26%), Gaps = 41/142 (28%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y FS+ W ++ C + + ++ +E EF++ + + + W
Sbjct: 29 YLFSFS-------GNSWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRINAFWIGLS 81
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ- 160
+ G WFW GS + P
Sbjct: 82 RNQSEG------------PWFWEDGSAF--------FPNSFQVRNA----VPQESLLHNC 117
Query: 161 --------HDVACHHLKPFVCE 174
++ C+ +CE
Sbjct: 118 VWIHGSEVYNQICNTSSYSICE 139
>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding
protein; HET: RAF; 1.65A {Cucumaria echinata} PDB:
3als_A* 3alt_A*
Length = 157
Score = 32.5 bits (74), Expect = 0.040
Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 52/158 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDA-----------VSLETPQENEFVKQRITR 91
+ H +++ +A N CR+ + + S+ + + F+ + +
Sbjct: 17 FRLFHNH-------LNFDNAENACRQFGLASCSGDELATGHLASIHSAESQAFLTELVKT 69
Query: 92 GNVRYIWTSGRKCNFNGCDRPDLQPANVNG-WFWS-GSGAKIGPTTQRNTGDWSATGGFG 149
I + G ++ + N W+ GS W
Sbjct: 70 SLPDLITGGWAPQVYIG-----MKVGSTNSDQTWTDGS-----SVDYDG---W------V 110
Query: 150 QAQPDNREAAQH-------------DVACHHLKPFVCE 174
+P+N ++ DV ++ ++C+
Sbjct: 111 SGEPNNGPNSRGAIAAGDYSRGFWADVYSNNNFKYICQ 148
>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Caenorhabditis elegans} SCOP:
d.169.1.1
Length = 150
Score = 31.7 bits (72), Expect = 0.059
Identities = 21/151 (13%), Positives = 39/151 (25%), Gaps = 52/151 (34%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNV-------- 94
+ + + ARN C +N F
Sbjct: 11 LTVNDD-------ILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAANTQFWIGLFKNS 63
Query: 95 --RYIWTSGRKCNFNGCDRP-----DLQPANVNG----WFWSGSGAKIGPTTQRNTGDWS 143
++ W G+ N + ++P + +P+N +F SG K + W
Sbjct: 64 DGQFYWDRGQGINPDLLNQPITYWANGEPSNDPTRQCVYFDGRSGDK--------SKVW- 114
Query: 144 ATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
C +PF+C+
Sbjct: 115 -----------------TTDTCATPRPFICQ 128
>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized
low density lipoprotein receptor, LOX-1, CTLD, C- type
lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1
PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A
Length = 135
Score = 31.6 bits (72), Expect = 0.064
Identities = 17/143 (11%), Positives = 36/143 (25%), Gaps = 44/143 (30%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y FS +W ++ C + + + + +F++Q I+ + + W
Sbjct: 21 YLFSSG-------SFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPF-WMGLS 72
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH 161
+ N + W W GS + G +
Sbjct: 73 RRNPSY------------PWLWEDGSPL--------MPHLFRVRG-----AVSQTYPSGT 107
Query: 162 ----------DVACHHLKPFVCE 174
C +C+
Sbjct: 108 CAYIQRGAVYAENCILAAFSICQ 130
>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo
sapiens}
Length = 118
Score = 28.9 bits (65), Expect = 0.47
Identities = 19/136 (13%), Positives = 34/136 (25%), Gaps = 38/136 (27%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
+F S E W ++R+ C+ + TP++ +F++ +
Sbjct: 14 FFLSTS-------ESSWNESRDFCKGKGSTLAIVNTPEKLKFLQDITDA---EKYFIGLI 63
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGD---WSATGGFGQAQPDNREA 158
W W S T Q + T F
Sbjct: 64 YHREEK------------RWRWINNSVFNGNVTNQNQNFNCATIGLTKTF---------- 101
Query: 159 AQHDVACHHLKPFVCE 174
+C +CE
Sbjct: 102 --DAASCDISYRRICE 115
>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system;
2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D
1ja3_A 1p1z_D
Length = 203
Score = 28.7 bits (64), Expect = 0.95
Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 7/51 (13%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGN 93
Y+F + W + C+ + + + +E E +F+++ + GN
Sbjct: 92 YYFIMN-------KTTWSGCKANCQHYGVPILKIEDEDELKFLQRHVIPGN 135
>3bdw_A Natural killer cells antigen CD94; NK cells, receptor,
glycoprotein, lectin, signal-A transmembrane, immune
system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1
PDB: 3cdg_J 1b6e_A 3cii_G
Length = 123
Score = 27.4 bits (61), Expect = 1.8
Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 47/141 (33%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
YF S E + W ++R++C + L+ E +F+ + ++ W
Sbjct: 17 YFISSE-------QKTWNESRHLCASQKSSLLQLQNTDELDFMSS-----SQQFYWIGLS 64
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNRE--AA 159
+ W W GS +Q F + N + A
Sbjct: 65 YSEEHT------------AWLWENGS-----ALSQYL---------FPSFETFNTKNCIA 98
Query: 160 QH------DVACHHLKPFVCE 174
+ D +C ++C+
Sbjct: 99 YNPNGNALDESCEDKNRYICK 119
>2x55_A Coagulase/fibrinolysin; transmembrane, aspartyl protease, cell
outer membrane, OMPT protease, hydrolase; HET: C8E;
1.85A {Yersinia pestis} PDB: 2x56_A* 2x4m_A*
Length = 293
Score = 27.4 bits (60), Expect = 2.7
Identities = 13/40 (32%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 117 ANVNGWFWSGSGAKIGPTT--QRNTGDWSATGGFGQAQPD 154
NV GW K G T Q W+ATGG
Sbjct: 114 LNVKGWLLQDENYKAGITAGYQETRFSWTATGGSYSYNNG 153
>4a95_A Glycylpeptide N-tetradecanoyltransferase; malaria; HET: 9MT NHM;
1.55A {Plasmodium vivax}
Length = 384
Score = 27.6 bits (61), Expect = 2.9
Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 18/100 (18%)
Query: 11 GVTHSY----------FFSWEHAPTRRVRHSTYRDARGVTHSYFFSWEHAPTRSLEVDWL 60
V ++Y S+ P++ + + Y +S++ A + L
Sbjct: 269 NVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLN-AAYSFYNVTTTATFKQL---MQ 324
Query: 61 DARNICRRHCMDA-VSLETPQENEFVKQ---RITRGNVRY 96
DA + +R+ D +LE Q + G+++Y
Sbjct: 325 DAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKY 364
>1i78_A Protease VII; integral outer membrane protein, beta barrel, HYDR;
HET: BOG; 2.60A {Escherichia coli} SCOP: f.4.4.1
Length = 297
Score = 27.4 bits (60), Expect = 3.0
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 117 ANVNGWFWSGSGAKIGPTT--QRNTGDWSATGGFGQAQPD 154
N+ GW + ++G Q + ++A GG +
Sbjct: 114 LNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSE 153
>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus}
SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A*
Length = 123
Score = 26.6 bits (59), Expect = 3.2
Identities = 21/140 (15%), Positives = 36/140 (25%), Gaps = 46/140 (32%)
Query: 43 YFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGR 102
Y F E E W ++ C + + + +E +F+K Y W
Sbjct: 18 YQFFNE-------EKTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVK-----SYHWMGLV 65
Query: 103 KCNFNGCDRPDLQPANVNGWFWS-GSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ- 160
+ NG W W GS + + A
Sbjct: 66 QIPANG------------SWQWEDGS-----SLSYNQ---------LTLVEIPKGSCAVY 99
Query: 161 ------HDVACHHLKPFVCE 174
+ C +L ++C
Sbjct: 100 GSSFKAYTEDCANLNTYICM 119
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 27.3 bits (60), Expect = 4.2
Identities = 26/155 (16%), Positives = 40/155 (25%), Gaps = 61/155 (39%)
Query: 21 EHAPT----RRVRHSTYRDARGVT---------HSYFFSWEHAPTRSLEVDWLDARNICR 67
AP+ R+ S R + HS+ P L L N+
Sbjct: 396 AKAPSGLDQSRIPFSE-RKLKFSNRFLPVASPFHSHLL----VPASDLINKDLVKNNVS- 449
Query: 68 RHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDL------QPANVNG 121
+A ++ P V ++R +G + P
Sbjct: 450 ---FNAKDIQIP-----VYDTFDGSDLR---------VLSGSISERIVDCIIRLPVK--- 489
Query: 122 W-------------FWSGSGAKIGPTTQRN---TG 140
W F G + +G T RN TG
Sbjct: 490 WETTTQFKATHILDFGPGGASGLGVLTHRNKDGTG 524
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping,
actin-binding, calcium, cytoplasm, cytoskeleton,
structural protein; 2.00A {Homo sapiens}
Length = 398
Score = 26.7 bits (58), Expect = 5.9
Identities = 9/87 (10%), Positives = 23/87 (26%)
Query: 28 VRHSTYRDARGVTHSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQ 87
+ ++ + Y + A + A + +++ + V + P E
Sbjct: 93 LLYTYLIGEKQHYLLYVWQGSQASQDEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHL 152
Query: 88 RITRGNVRYIWTSGRKCNFNGCDRPDL 114
++ G N P
Sbjct: 153 MSIFKGRMVVYQGGTSRTNNLETGPST 179
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase,
isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas
fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Length = 231
Score = 25.6 bits (57), Expect = 9.1
Identities = 8/34 (23%), Positives = 9/34 (26%), Gaps = 2/34 (5%)
Query: 154 DNREAAQHDVACHHLKPFVCEDSDELLNFVRSRN 187
+ A H L P E VR N
Sbjct: 117 QGKRATTHWAYHELLAPLGAIPVHER--VVRDGN 148
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.134 0.456
Gapped
Lambda K H
0.267 0.0563 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,084,109
Number of extensions: 167628
Number of successful extensions: 436
Number of sequences better than 10.0: 1
Number of HSP's gapped: 344
Number of HSP's successfully gapped: 90
Length of query: 191
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 103
Effective length of database: 4,244,745
Effective search space: 437208735
Effective search space used: 437208735
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.0 bits)