RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4323
(191 letters)
>d1wk1a_ d.169.1.1 (A:) Hypothetical protein F28B4.3 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 150
Score = 43.1 bits (100), Expect = 3e-06
Identities = 16/119 (13%), Positives = 28/119 (23%), Gaps = 7/119 (5%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ ARN C +N F W K + Q
Sbjct: 17 ILSMPQARNFCASAGGYLADDLGDDKNNFYSSIAANT---QFWIGLFKNSDGQFYWDRGQ 73
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
N + + G + T + ++ C +PF+C+
Sbjct: 74 GINPDLLNQPITYWANGEPSNDPTRQCVYF----DGRSGDKSKVWTTDTCATPRPFICQ 128
>d1byfa_ d.169.1.1 (A:) Lectin TC14 {Tunicate (Polyandrocarpa
misakiensis) [TaxId: 7723]}
Length = 123
Score = 37.5 bits (85), Expect = 2e-04
Identities = 18/134 (13%), Positives = 32/134 (23%), Gaps = 16/134 (11%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTS 100
+ FS E +++ DA C+ M VS + +
Sbjct: 2 YEILFSDE-------TMNYADAGTYCQSRGMALVSSAMRDSTMVKAILAFTEVKGHDYWV 54
Query: 101 GRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ 160
G +G + G + Q ++
Sbjct: 55 GADNLQDGAYNF---------LWNDGVSLPTDSDLWSPNEPSNPQSWQLCVQIWSKYNLL 105
Query: 161 HDVACHHLKPFVCE 174
DV C + +CE
Sbjct: 106 DDVGCGGARRVICE 119
>d1hupa1 d.169.1.1 (A:112-228) Mannose-binding protein A, C-lectin
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 35.8 bits (81), Expect = 7e-04
Identities = 18/119 (15%), Positives = 31/119 (26%), Gaps = 18/119 (15%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ + + +C + + EN ++ I I + F L
Sbjct: 14 IMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLT 73
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
N N + +G+ G W +DV C VCE
Sbjct: 74 YTNWNEGEPNNAGSDEDCVLLLKNGQW------------------NDVPCSTSHLAVCE 114
>d1h8ua_ d.169.1.1 (A:) Eosinophil major basic protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 115
Score = 35.3 bits (80), Expect = 9e-04
Identities = 18/117 (15%), Positives = 31/117 (26%), Gaps = 14/117 (11%)
Query: 59 WLDARNICRR-HCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQPA 117
+ A CRR + + VS+ N ++ ++ N +W GR
Sbjct: 11 FSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITG------------ 58
Query: 118 NVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
+ + + GG R C PF+C
Sbjct: 59 SGRCRRFQWVDGSRWNFAYWAAHQPWSRGGHC-VALCTRGGYWRRAHCLRRLPFICS 114
>d1uv0a_ d.169.1.1 (A:) Pancreatitis-associated protein 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 140
Score = 32.4 bits (72), Expect = 0.016
Identities = 27/123 (21%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 56 EVDWLDARN-ICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDL 114
W DA +R + VS+ + E FV + Y + D
Sbjct: 23 PKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVKSIGNSYSYVW-----IGLHDPTQG 77
Query: 115 QPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
N GW WS S +RN S+ G D C+ P+VC+
Sbjct: 78 TEPNGEGWEWSSSDVMNYFAWERNPSTISSPGHCASLSRSTAFLRWKDYNCNVRLPYVCK 137
Query: 175 DSD 177
+D
Sbjct: 138 FTD 140
>d1rdl1_ d.169.1.1 (1:) Mannose-binding protein A, C-lectin domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 111
Score = 30.8 bits (68), Expect = 0.031
Identities = 17/119 (14%), Positives = 30/119 (25%), Gaps = 18/119 (15%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ A+ +C + +EN ++ I + F ++
Sbjct: 9 RMPLNRAKALCSELQGTVATPRNAEENRAIQNVAKDVAFLGITDQRTENVFEDLTGNRVR 68
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
N N + G+ G W +DV C VCE
Sbjct: 69 YTNWNEGEPNNVGSGENCVVLLTNGKW------------------NDVPCSDSFLVVCE 109
>d1g1ta1 d.169.1.1 (A:1-118) E-selectin, C-lectin domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 30.9 bits (68), Expect = 0.034
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 16/132 (12%)
Query: 42 SYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSG 101
SY S E + + +A C++ V+++ +E E+ I + Y W
Sbjct: 2 SYNTSTE-------AMTYDEASAYCQQRYTHLVAIQNKEEIEY-LNSILSYSPSYYWIGI 53
Query: 102 RKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH 161
RK N +P W+ + N + + +
Sbjct: 54 RKVNNVWVWVGTQKPLTEEAKNWA--------PGEPNNRQKDEDCVEIYIKREKDVGMWN 105
Query: 162 DVACHHLKPFVC 173
D C K +C
Sbjct: 106 DERCSKKKLALC 117
>d2msba_ d.169.1.1 (A:) Mannose-binding protein A, C-lectin domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 30.7 bits (68), Expect = 0.035
Identities = 16/119 (13%), Positives = 33/119 (27%), Gaps = 18/119 (15%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ + + +C +EN+ +++ I + F L
Sbjct: 10 RMPFSKVKALCSELRGTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVTGGRLT 69
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
+N + G+ T + G W +D++C VCE
Sbjct: 70 YSNWKKDEPNDHGSGEDCVTIVDNGLW------------------NDISCQASHTAVCE 110
>d1tdqb_ d.169.1.1 (B:) Aggrecan core protein {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 126
Score = 30.8 bits (68), Expect = 0.038
Identities = 25/119 (21%), Positives = 38/119 (31%), Gaps = 15/119 (12%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
W+DA CR S+ TP+E EFV + Y W G
Sbjct: 21 RETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQ----DYQWIGLNDRTIEGDF----- 71
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
+ G + ++ ATG + +DV C++ PF C+
Sbjct: 72 ------RWSDGHSLQFEKWRPNQPDNFFATGEDCVVMIWHERGEWNDVPCNYQLPFTCK 124
>d1r13a1 d.169.1.1 (A:110-228) Surfactant protein, lectin domain
{Rat (Rattus norvegicus), SP-A [TaxId: 10116]}
Length = 119
Score = 29.2 bits (64), Expect = 0.13
Identities = 17/119 (14%), Positives = 30/119 (25%), Gaps = 16/119 (13%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
V++ + +C R + TP+ENE + + N D
Sbjct: 16 SVNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYNNYVYLGMIEDQTPGDFHYLDGA 75
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
+ W+ + G +D C + VCE
Sbjct: 76 SVSYTNWYPG-------EPRGQGKEKCVEMYTDGT---------WNDRGCLQYRLAVCE 118
>d1g1sa1 d.169.1.1 (A:1-118) P-selectin, C-lectin domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 29.3 bits (64), Expect = 0.15
Identities = 15/132 (11%), Positives = 37/132 (28%), Gaps = 16/132 (12%)
Query: 42 SYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSG 101
+Y +S + W +R C+ D V+++ E +++ + + + Y
Sbjct: 2 TYHYSTK-------AYSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPYYSSYYWIGIR 54
Query: 102 RKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQH 161
+ N + + N + + + +
Sbjct: 55 KNNKTWTWVGTKKALTNEAENWADN---------EPNNKRNNEDCVEIYIKSPSAPGKWN 105
Query: 162 DVACHHLKPFVC 173
D C K +C
Sbjct: 106 DEHCLKKKHALC 117
>d1pwba1 d.169.1.1 (A:235-355) Surfactant protein, lectin domain
{Human (Homo sapiens), SP-D [TaxId: 9606]}
Length = 121
Score = 29.3 bits (64), Expect = 0.16
Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 15/119 (12%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ +A+ +C + S + EN ++Q + N + P +
Sbjct: 17 VKPFTEAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTYPTGE 76
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
+ W G + + G + +D AC + VCE
Sbjct: 77 SLVYSNW---APGEPNDDGGSEDCVEIFTNGKW------------NDRACGEKRLVVCE 120
>d1xpha1 d.169.1.1 (A:265-394) DC-SIGNR (DC-SIGN related receptor)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 29.3 bits (64), Expect = 0.17
Identities = 20/138 (14%), Positives = 41/138 (29%), Gaps = 29/138 (21%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTS 100
+ YF S + +W D+ C+ V ++T +E F++ + +R N
Sbjct: 14 NCYFMSNS-------QRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMGL 66
Query: 101 GRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQR----NTGDWSATGGFGQAQPDNR 156
D P + + + SG + + W
Sbjct: 67 SDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGW-------------- 112
Query: 157 EAAQHDVACHHLKPFVCE 174
+D C ++C+
Sbjct: 113 ----NDNRCDVDNYWICK 126
>d1egga_ d.169.1.1 (A:) Macrophage mannose receptor, CRD4 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 28.3 bits (61), Expect = 0.32
Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 10/119 (8%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ W ++R+ CR D S+ +E + + + IT + + +
Sbjct: 25 KKTWFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKLFWLGLTYGSPSEGFTWS 84
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
+ + G G+ +D+ C HL ++C+
Sbjct: 85 DGSPVSYENWAYGEPNNYQNVEYCGELKGDPTMS----------WNDINCEHLNNWICQ 133
>d1gz2a_ d.169.1.1 (A:) Ovocleidin-17 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 139
Score = 27.5 bits (59), Expect = 0.59
Identities = 17/136 (12%), Positives = 34/136 (25%), Gaps = 13/136 (9%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITRGNVRYIW 98
F E+ W A + CRR + ++ + E + + +
Sbjct: 12 GCLGFFSR-------ELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNASRGGDGS 64
Query: 99 TSGRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREA 158
+G L + + G + T G + +
Sbjct: 65 ----GEGADGRVWIGLHRPAGSRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEEAFT 120
Query: 159 AQHDVACHHLKPFVCE 174
+ C FVC+
Sbjct: 121 SWAARPCTERNAFVCK 136
>d1ypqa1 d.169.1.1 (A:140-270) Oxidised low density lipoprotein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 131
Score = 27.6 bits (60), Expect = 0.61
Identities = 16/137 (11%), Positives = 40/137 (29%), Gaps = 28/137 (20%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTS 100
+ Y FS +W ++ C + + + + +F++Q I+ + +
Sbjct: 15 NCYLFSSG-------SFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFPFWMGL 67
Query: 101 GRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPT---TQRNTGDWSATGGFGQAQPDNRE 157
R+ D P + + G+ ++ P+ G
Sbjct: 68 SRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAV--------------- 112
Query: 158 AAQHDVACHHLKPFVCE 174
+ C +C+
Sbjct: 113 ---YAENCILAAFSICQ 126
>d1koea_ d.169.1.5 (A:) Endostatin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 172
Score = 27.6 bits (61), Expect = 0.76
Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Query: 123 FWSGSGAKIGPTTQRNTGDWS--ATGGFGQAQPDNREAA--QHDVACHHLKPFVC 173
W GS + W TG GQA Q +CH+ +C
Sbjct: 113 VWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHNSYIVLC 167
>d1sb2b1 d.169.1.1 (B:2-128) Snake coagglutinin beta chain {Malayan
pit viper (Calloselasma rhodostoma), rhodocetin [TaxId:
8717]}
Length = 127
Score = 27.0 bits (58), Expect = 0.97
Identities = 12/121 (9%), Positives = 30/121 (24%), Gaps = 20/121 (16%)
Query: 56 EVDWLDARNICRRHCMDA--VSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPD 113
+ W++A C + + VS+ + E +F+ I + + + +
Sbjct: 21 KKTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIVVNFDKQRYRAWTGLTERNLKWTN 80
Query: 114 LQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVC 173
+ + W + C F+C
Sbjct: 81 GASVSYENLYEPYIRKCFVVQPWEGKSKW------------------YKADCEEKNAFLC 122
Query: 174 E 174
+
Sbjct: 123 K 123
>d1jzna_ d.169.1.1 (A:) Galactose-specific C-type lectin {Western
diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]}
Length = 135
Score = 26.7 bits (57), Expect = 1.3
Identities = 14/136 (10%), Positives = 33/136 (24%), Gaps = 18/136 (13%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAV--SLETPQENEFVKQRITRGNVRYIW 98
Y + W DA CR++ S E+ + + I+ +
Sbjct: 13 LCYKIFNQ-------LKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYHKGQEN 65
Query: 99 TSGRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREA 158
+ + + + + + + G+
Sbjct: 66 VWIGLRDKKKDFSWEWTDRSCTDYLTWDKNQPDHYQNKEFCVELVSLTGYRLW------- 118
Query: 159 AQHDVACHHLKPFVCE 174
+D C F+C+
Sbjct: 119 --NDQVCESKDAFLCQ 132
>d1e87a_ d.169.1.1 (A:) CD69 {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 26.0 bits (56), Expect = 1.7
Identities = 17/134 (12%), Positives = 33/134 (24%), Gaps = 33/134 (24%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTS 100
YF S + W A+N C H +++ ++ F+K+ R
Sbjct: 13 KCYFISTV-------KRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKK 65
Query: 101 GRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ 160
+ + + N WF K +
Sbjct: 66 EPGHPWKWSNGKEF-----NNWFNVTGSDKCV---FLKNTEV------------------ 99
Query: 161 HDVACHHLKPFVCE 174
+ C ++C
Sbjct: 100 SSMECEKNLYWICN 113
>d1jwia_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Puff adder
(Bitis arietans), bitiscetin [TaxId: 8692]}
Length = 124
Score = 25.8 bits (55), Expect = 2.4
Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 21/134 (15%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTS 100
H Y + W DA C + S+++ +E +FV + ++ ++++
Sbjct: 11 HCYKVFKK-------VGTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTKFVY-- 61
Query: 101 GRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ 160
D W+ + +
Sbjct: 62 -----DAWIGLRDESKTQQCSPQWTDG-------SSVVYENVDEPTKCFGLDVHTEYRTW 109
Query: 161 HDVACHHLKPFVCE 174
D+ C PF+C+
Sbjct: 110 TDLPCGEKNPFICK 123
>d3c8ja1 d.169.1.1 (A:138-259) NK cell receptor {Mouse (Mus
musculus), ly49-c [TaxId: 10090]}
Length = 122
Score = 25.2 bits (54), Expect = 3.1
Identities = 11/145 (7%), Positives = 32/145 (22%), Gaps = 50/145 (34%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITR--------- 91
Y+F + W + C+ + + + +E E +F+++ +
Sbjct: 12 KCYYFIMN-------KTTWSGCKANCQHYGVPILKIEDEDELKFLQRHVIPGNYWIGLSY 64
Query: 92 --GNVRYIWTSGRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFG 149
+ W + + + +
Sbjct: 65 DKKKKEWAWIDNGPSKLDMKIKKMNFKSRGCVFLSKAR--------------I------- 103
Query: 150 QAQPDNREAAQHDVACHHLKPFVCE 174
D+ C+ +C
Sbjct: 104 -----------EDIDCNIPYYCICG 117
>d1hq8a_ d.169.1.1 (A:) NK cell-activating receptor nkg2d {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 123
Score = 25.3 bits (54), Expect = 3.2
Identities = 15/134 (11%), Positives = 35/134 (26%), Gaps = 30/134 (22%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTS 100
+ Y F E E W ++ C + + + +E +F+K + + +
Sbjct: 16 NCYQFFNE-------EKTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYHWMGLVQI- 67
Query: 101 GRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ 160
++ D L K ++
Sbjct: 68 PANGSWQWEDGSSLSYNQ----LTLVEIPKGSCAVYGSSFKA------------------ 105
Query: 161 HDVACHHLKPFVCE 174
+ C +L ++C
Sbjct: 106 YTEDCANLNTYICM 119
>d1qo3c_ d.169.1.1 (C:) NK cell receptor {Mouse (Mus musculus),
ly49-a [TaxId: 10090]}
Length = 133
Score = 25.2 bits (54), Expect = 3.3
Identities = 14/134 (10%), Positives = 31/134 (23%), Gaps = 28/134 (20%)
Query: 41 HSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTS 100
Y+F + W + C+ + + ++ E +F++ + W
Sbjct: 24 KCYYFVMD-------RKTWSGCKQTCQSSSLSLLKIDDEDELKFLQLVV---PSDSCWVG 73
Query: 101 GRKCNFNGCDRPDLQPANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ 160
N W W + P+ G
Sbjct: 74 LSYDNKKKD------------WAWIDN----RPSKLALNTRKYNIRDGGCMLLSKTRL-- 115
Query: 161 HDVACHHLKPFVCE 174
+ C + +C
Sbjct: 116 DNGNCDQVFICICG 129
>d1tn3a_ d.169.1.1 (A:) Tetranectin {Human (Homo sapiens) [TaxId:
9606]}
Length = 137
Score = 25.1 bits (53), Expect = 3.8
Identities = 13/120 (10%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+ +A C + +T EN+ + + + + +
Sbjct: 23 TKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVGNEAEIWLGLND---------M 73
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQ-HDVACHHLKPFVCE 174
A +G+ T A + D C P++C+
Sbjct: 74 AAEGTWVDMTGARIAYKNWETEITAQPDGGKTENCAVLSGAANGKWFDKRCRDQLPYICQ 133
>d1fvua_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Jararaca
(Bothrops jararaca), botrocetin [TaxId: 8724]}
Length = 133
Score = 24.3 bits (51), Expect = 6.8
Identities = 15/119 (12%), Positives = 31/119 (26%), Gaps = 9/119 (7%)
Query: 56 EVDWLDARNICRRHCMDAVSLETPQENEFVKQRITRGNVRYIWTSGRKCNFNGCDRPDLQ 115
+++W DA C + ++ + + + Q
Sbjct: 20 KMNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKNIQSSDLYAWIGLRVENKEKQ 79
Query: 116 PANVNGWFWSGSGAKIGPTTQRNTGDWSATGGFGQAQPDNREAAQHDVACHHLKPFVCE 174
++ S S + T + GF ++ C PFVC+
Sbjct: 80 CSSEWSDGSSVSYENVVERTVKKCFALEKDLGFVL---------WINLYCAQKNPFVCK 129
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.134 0.456
Gapped
Lambda K H
0.267 0.0466 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 785,847
Number of extensions: 35085
Number of successful extensions: 134
Number of sequences better than 10.0: 1
Number of HSP's gapped: 105
Number of HSP's successfully gapped: 51
Length of query: 191
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 111
Effective length of database: 1,309,196
Effective search space: 145320756
Effective search space used: 145320756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.7 bits)