Your job contains 1 sequence.
>psy4325
MSDVKAKSFLYQRIGLAVQRGNGLTVGICASKLHDLLHEAHAGSSSSFSSSFNDVDYEGI
MPVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFC
KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRK
LVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQD
TGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSH
GKTAFS
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4325
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002023 - symbol:Lim3 "Lim3" species:7227 "Drosoph... 1019 7.7e-103 1
UNIPROTKB|Q9UBR4 - symbol:LHX3 "LIM/homeobox protein Lhx3... 874 1.8e-87 1
UNIPROTKB|Q2TEA4 - symbol:Lhx3 "LIM homeodomain 3 protein... 873 2.3e-87 1
UNIPROTKB|O97581 - symbol:LHX3 "LIM/homeobox protein Lhx3... 873 2.3e-87 1
MGI|MGI:102673 - symbol:Lhx3 "LIM homeobox protein 3" spe... 870 4.7e-87 1
UNIPROTKB|G3V8E3 - symbol:Lhx3 "Protein Lhx3" species:101... 870 4.7e-87 1
UNIPROTKB|G3V9E7 - symbol:Lhx3 "RCG45383, isoform CRA_b" ... 870 4.7e-87 1
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 869 6.0e-87 1
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 861 4.3e-86 1
ZFIN|ZDB-GENE-980526-131 - symbol:lhx3 "LIM homeobox 3" s... 860 5.4e-86 1
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 856 1.4e-85 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 846 1.7e-84 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 846 1.7e-84 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 844 2.7e-84 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 843 3.4e-84 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 842 4.4e-84 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 834 3.1e-83 1
UNIPROTKB|F6QGM2 - symbol:LHX3 "LIM/homeobox protein Lhx3... 783 7.9e-78 1
UNIPROTKB|E2QZZ9 - symbol:LHX3 "Uncharacterized protein" ... 739 3.6e-73 1
UNIPROTKB|L7N0D8 - symbol:LHX3 "Uncharacterized protein" ... 729 4.1e-72 1
WB|WBGene00000438 - symbol:ceh-14 species:6239 "Caenorhab... 659 1.1e-64 1
UNIPROTKB|P20271 - symbol:ceh-14 "Homeobox protein ceh-14... 659 1.1e-64 1
UNIPROTKB|P37137 - symbol:lhx5 "LIM/homeobox protein Lhx5... 420 3.3e-63 2
UNIPROTKB|A6QQY6 - symbol:LHX5 "Uncharacterized protein" ... 419 3.3e-63 2
UNIPROTKB|E2RRP3 - symbol:LHX5 "Uncharacterized protein" ... 419 3.3e-63 2
UNIPROTKB|Q9H2C1 - symbol:LHX5 "LIM/homeobox protein Lhx5... 419 3.3e-63 2
MGI|MGI:107792 - symbol:Lhx5 "LIM homeobox protein 5" spe... 419 3.3e-63 2
RGD|71079 - symbol:Lhx5 "LIM homeobox 5" species:10116 "R... 419 3.3e-63 2
ZFIN|ZDB-GENE-980526-116 - symbol:lhx1b "LIM homeobox 1b"... 416 6.9e-63 2
UNIPROTKB|F1RKD0 - symbol:LHX5 "Uncharacterized protein" ... 412 1.8e-62 2
UNIPROTKB|E1BQX0 - symbol:LHX5 "Uncharacterized protein" ... 412 2.9e-62 2
FB|FBgn0026411 - symbol:Lim1 species:7227 "Drosophila mel... 413 4.8e-62 2
WB|WBGene00003000 - symbol:lin-11 species:6239 "Caenorhab... 343 1.4e-54 2
UNIPROTKB|Q8TE12 - symbol:LMX1A "LIM homeobox transcripti... 324 4.7e-48 2
UNIPROTKB|F1MC25 - symbol:LMX1A "Uncharacterized protein"... 318 7.7e-48 2
UNIPROTKB|F1PDJ1 - symbol:LMX1A "Uncharacterized protein"... 318 7.7e-48 2
UNIPROTKB|Q8UVR3 - symbol:lmx1b.1 "LIM homeobox transcrip... 329 5.3e-47 2
MGI|MGI:1888519 - symbol:Lmx1a "LIM homeobox transcriptio... 311 6.8e-47 2
RGD|1304784 - symbol:Lmx1a "LIM homeobox transcription fa... 311 6.8e-47 2
UNIPROTKB|B7ZLH2 - symbol:LMX1B "LMX1B protein" species:9... 317 2.3e-46 2
UNIPROTKB|F8VYP0 - symbol:LMX1B "LIM homeobox transcripti... 317 2.3e-46 2
UNIPROTKB|F8W7W6 - symbol:LMX1B "LIM homeobox transcripti... 317 2.3e-46 2
UNIPROTKB|O60663 - symbol:LMX1B "LIM homeobox transcripti... 317 2.3e-46 2
MGI|MGI:1100513 - symbol:Lmx1b "LIM homeobox transcriptio... 317 2.3e-46 2
UNIPROTKB|G3V877 - symbol:Lmx1b "LIM homeobox transcripti... 317 2.3e-46 2
UNIPROTKB|P53413 - symbol:LMX1B "LIM/homeobox protein LMX... 318 6.0e-46 2
ZFIN|ZDB-GENE-050114-3 - symbol:lmx1ba "LIM homeobox tran... 310 7.6e-46 2
UNIPROTKB|F1NDZ5 - symbol:LMX1B "LIM/homeobox protein LMX... 311 3.3e-45 2
ZFIN|ZDB-GENE-051220-1 - symbol:lhx2b "LIM homeobox 2b" s... 331 3.6e-42 2
ZFIN|ZDB-GENE-990415-133 - symbol:isl2b "islet2b" species... 306 5.9e-42 2
UNIPROTKB|E1BM14 - symbol:LHX2 "Uncharacterized protein" ... 326 9.5e-42 2
UNIPROTKB|E2RPC3 - symbol:LHX2 "Uncharacterized protein" ... 326 9.5e-42 2
UNIPROTKB|P50458 - symbol:LHX2 "LIM/homeobox protein Lhx2... 326 9.5e-42 2
UNIPROTKB|C4TJC6 - symbol:Lhx2 "LIM homeobox protein 2" s... 326 9.5e-42 2
MGI|MGI:96785 - symbol:Lhx2 "LIM homeobox protein 2" spec... 326 9.5e-42 2
UNIPROTKB|D4A380 - symbol:Lhx2 "LIM/homeobox protein Lhx2... 326 9.5e-42 2
UNIPROTKB|G3N0G6 - symbol:LHX2 "Uncharacterized protein" ... 326 9.5e-42 2
ZFIN|ZDB-GENE-980526-562 - symbol:isl2a "islet2a" species... 304 9.5e-42 2
UNIPROTKB|E1BM60 - symbol:ISL2 "Uncharacterized protein" ... 311 1.2e-41 2
UNIPROTKB|Q96A47 - symbol:ISL2 "Insulin gene enhancer pro... 311 1.2e-41 2
MGI|MGI:109156 - symbol:Isl2 "insulin related protein 2 (... 311 1.2e-41 2
RGD|621849 - symbol:Isl2 "ISL LIM homeobox 2" species:101... 311 1.2e-41 2
UNIPROTKB|P50480 - symbol:Isl2 "Insulin gene enhancer pro... 311 1.2e-41 2
RGD|71076 - symbol:Lhx2 "LIM homeobox 2" species:10116 "R... 324 1.5e-41 2
UNIPROTKB|P36198 - symbol:Lhx2 "LIM/homeobox protein Lhx2... 324 1.5e-41 2
UNIPROTKB|B7ZP59 - symbol:lhx1 "Homeobox protein" species... 435 5.9e-41 1
UNIPROTKB|P29674 - symbol:lhx1 "LIM/homeobox protein Lhx1... 435 5.9e-41 1
WB|WBGene00003167 - symbol:mec-3 species:6239 "Caenorhabd... 259 6.6e-41 2
ZFIN|ZDB-GENE-041014-332 - symbol:lmx1a "LIM homeobox tra... 277 8.4e-41 2
MGI|MGI:1306803 - symbol:Lhx6 "LIM homeobox protein 6" sp... 411 1.4e-40 2
FB|FBgn0013751 - symbol:Awh "Arrowhead" species:7227 "Dro... 429 2.6e-40 1
ZFIN|ZDB-GENE-980526-347 - symbol:lhx1a "LIM homeobox 1a"... 428 3.3e-40 1
ZFIN|ZDB-GENE-050417-210 - symbol:lhx9 "LIM homeobox 9" s... 314 5.8e-40 2
ZFIN|ZDB-GENE-980526-484 - symbol:lhx5 "LIM homeobox 5" s... 425 6.8e-40 1
FB|FBgn0036274 - symbol:CG4328 species:7227 "Drosophila m... 424 8.7e-40 1
FB|FBgn0052105 - symbol:CG32105 species:7227 "Drosophila ... 258 1.1e-39 2
UNIPROTKB|H7C0H1 - symbol:LHX2 "LIM/homeobox protein Lhx2... 303 2.5e-39 2
UNIPROTKB|P48742 - symbol:LHX1 "LIM/homeobox protein Lhx1... 419 2.9e-39 1
UNIPROTKB|A2I8Z7 - symbol:lhx9 "LIM/homeobox protein Lhx9... 313 3.2e-39 2
UNIPROTKB|A7Z015 - symbol:LHX1 "Uncharacterized protein" ... 417 4.8e-39 1
UNIPROTKB|E2RMA8 - symbol:LHX1 "Uncharacterized protein" ... 417 4.8e-39 1
UNIPROTKB|F2Z531 - symbol:LHX1 "Uncharacterized protein" ... 417 4.8e-39 1
UNIPROTKB|P63008 - symbol:Lhx1 "LIM/homeobox protein Lhx1... 417 4.8e-39 1
UNIPROTKB|Q5IS44 - symbol:LHX1 "LIM/homeobox protein Lhx1... 417 4.8e-39 1
UNIPROTKB|Q5IS89 - symbol:LHX1 "LIM/homeobox protein Lhx1... 417 4.8e-39 1
UNIPROTKB|Q5ISK2 - symbol:Q5ISK2 "LIM homeobox protein 1"... 417 4.8e-39 1
MGI|MGI:99783 - symbol:Lhx1 "LIM homeobox protein 1" spec... 417 4.8e-39 1
RGD|71074 - symbol:Lhx1 "LIM homeobox 1" species:10116 "R... 417 4.8e-39 1
ZFIN|ZDB-GENE-091118-109 - symbol:lhx2a "LIM homeobox 2a"... 315 5.1e-39 2
UNIPROTKB|P53411 - symbol:LHX1 "LIM/homeobox protein Lhx1... 415 7.8e-39 1
UNIPROTKB|F1NX79 - symbol:LHX1 "LIM/homeobox protein Lhx1... 415 7.8e-39 1
UNIPROTKB|E1B8I6 - symbol:LHX6 "Uncharacterized protein" ... 414 9.9e-39 1
UNIPROTKB|Q9UPM6 - symbol:LHX6 "LIM/homeobox protein Lhx6... 414 9.9e-39 1
UNIPROTKB|A2PZF9 - symbol:lhx9 "LIM/homeobox protein Lhx9... 305 1.1e-38 2
WB|WBGene00002988 - symbol:lim-6 species:6239 "Caenorhabd... 413 1.3e-38 1
ZFIN|ZDB-GENE-041025-1 - symbol:lhx6 "LIM homeobox 6" spe... 413 1.3e-38 1
RGD|1306174 - symbol:Lhx6 "LIM homeobox 6" species:10116 ... 411 2.1e-38 1
UNIPROTKB|E2RA99 - symbol:LHX6 "Uncharacterized protein" ... 408 4.3e-38 1
UNIPROTKB|J9P8Y1 - symbol:LHX6 "Uncharacterized protein" ... 408 4.3e-38 1
FB|FBgn0003896 - symbol:tup "tailup" species:7227 "Drosop... 285 4.7e-38 2
WARNING: Descriptions of 1019 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002023 [details] [associations]
symbol:Lim3 "Lim3" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HSSP:P50480 FlyBase:FBgn0002023
EMBL:BT003469 ProteinModelPortal:Q86P58 SMR:Q86P58 IntAct:Q86P58
STRING:Q86P58 PRIDE:Q86P58 InParanoid:Q86P58 ArrayExpress:Q86P58
Bgee:Q86P58 Uniprot:Q86P58
Length = 523
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 197/245 (80%), Positives = 209/245 (85%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFK- 126
A+IPKCGGC +LILDRFILKVLERTWHA+CL+C EC L +KCFARNG LFCKEDFFK
Sbjct: 117 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKS 176
Query: 127 --RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
R+GTKC+ C+MGIPPTQVVRRAQD VYHL CF C MC+R LNTGDEFYLMEDRKL+CK
Sbjct: 177 NRRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 236
Query: 185 PDYEAAKAK----DGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQD 240
DYE AKAK DG+ LDGDQPNKRPRTTITAKQLETLK AYN SPKPARHVREQLSQD
Sbjct: 237 RDYEEAKAKGLYLDGS-LDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD 295
Query: 241 TGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSP-------KDELKIDLD 293
TGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKG SP KDELK+D D
Sbjct: 296 TGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGNCSPRTDKFLDKDELKVDYD 355
Query: 294 SNFSH 298
S FSH
Sbjct: 356 S-FSH 359
>UNIPROTKB|Q9UBR4 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021983 GO:GO:0048839 GO:GO:0021527 EMBL:AL138781
GO:GO:0000988 GO:GO:0021521 Orphanet:226307 eggNOG:NOG275246
HOGENOM:HOG000231629 KO:K09374 GO:GO:0021520 HOVERGEN:HBG006263
CTD:8022 OMA:PLCAGCN EMBL:AF156888 EMBL:AF156889 EMBL:AH008761
EMBL:AF096169 EMBL:AF214637 EMBL:AF367089 EMBL:AF367085
EMBL:AF367086 EMBL:AF367087 EMBL:AF367088 IPI:IPI00002747
IPI:IPI00220680 RefSeq:NP_055379.1 RefSeq:NP_835258.1
UniGene:Hs.148427 ProteinModelPortal:Q9UBR4 SMR:Q9UBR4
STRING:Q9UBR4 PhosphoSite:Q9UBR4 DMDM:12643415 PRIDE:Q9UBR4
DNASU:8022 Ensembl:ENST00000371746 Ensembl:ENST00000371748
GeneID:8022 KEGG:hsa:8022 UCSC:uc004cha.3 GeneCards:GC09M139088
HGNC:HGNC:6595 MIM:221750 MIM:600577 neXtProt:NX_Q9UBR4
Orphanet:231720 PharmGKB:PA30366 OrthoDB:EOG4SBDZ0 ChiTaRS:LHX3
GenomeRNAi:8022 NextBio:30588 ArrayExpress:Q9UBR4 Bgee:Q9UBR4
CleanEx:HS_LHX3 Genevestigator:Q9UBR4 GermOnline:ENSG00000107187
GO:GO:0021526 Uniprot:Q9UBR4
Length = 397
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 164/230 (71%), Positives = 187/230 (81%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC ILDRFILK L+R WH++CLKC +C PLAE+CF+R ++CK+DFFKRFG
Sbjct: 28 IPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFKRFG 87
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLMED +LVCK DYE
Sbjct: 88 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 147
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQLS +TGLDMRVVQ
Sbjct: 148 AKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGT-SPKDELKIDLDSN 295
VWFQNRRAKEKRLKKDAGR RW QYFR+MK GG+ S KD ++ DS+
Sbjct: 203 VWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGGSKSDKDSVQEGQDSD 252
>UNIPROTKB|Q2TEA4 [details] [associations]
symbol:Lhx3 "LIM homeodomain 3 protein b isoform"
species:9913 "Bos taurus" [GO:0048839 "inner ear development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021983 GO:GO:0048839
GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021520
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN GO:GO:0021526
EMBL:DAAA02032311 EMBL:AY923832 EMBL:AY923833 IPI:IPI00687531
IPI:IPI01028343 RefSeq:NP_001033709.1 UniGene:Bt.45155
Ensembl:ENSBTAT00000055580 GeneID:539213 KEGG:bta:539213
NextBio:20877851 Uniprot:Q2TEA4
Length = 403
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 163/224 (72%), Positives = 185/224 (82%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC ILDRFILK L+R WH++CLKC +C APLAE+CF+R ++CK+DFFKRFG
Sbjct: 33 IPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFKRFG 92
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLMED +LVCK DYE
Sbjct: 93 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQLS +TGLDMRVVQ
Sbjct: 153 AKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGT-SPKDELK 289
VWFQNRRAKEKRLKKDAGR RW QYFR+MK GG+ S KD ++
Sbjct: 208 VWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRARGGSKSDKDSVQ 251
>UNIPROTKB|O97581 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 EMBL:AF063245 UniGene:Ssc.26829
ProteinModelPortal:O97581 SMR:O97581 Uniprot:O97581
Length = 383
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 166/237 (70%), Positives = 189/237 (79%)
Query: 57 YEGIMPVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNG 116
+EG P + IP C GC ILDRFILK L+R WH++CLKC +C PLAE+CF+R
Sbjct: 1 WEG-RPQELGGKEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGE 59
Query: 117 LLFCKEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
L+CK+DFFKRFGTKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLM
Sbjct: 60 SLYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLM 119
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQ 236
ED +LVCK DYE AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQ
Sbjct: 120 EDSRLVCKADYETAKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQ 174
Query: 237 LSQDTGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGT-SPKDELK 289
LS +TGLDMRVVQVWFQNRRAKEKRLKKDAGR RW QYFR+MK GG+ S KD ++
Sbjct: 175 LSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRARGGSKSDKDSVQ 231
>MGI|MGI:102673 [details] [associations]
symbol:Lhx3 "LIM homeobox protein 3" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001890
"placenta development" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IDA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IGI] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IDA] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:102673 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890 GO:GO:0021983
GO:GO:0048839 GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 GO:GO:0021520 PDB:2RGT PDBsum:2RGT PDB:2JTN PDBsum:2JTN
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN OrthoDB:EOG4SBDZ0
GO:GO:0021526 EMBL:L33776 EMBL:L38857 EMBL:L38249 EMBL:L38248
IPI:IPI00118214 IPI:IPI00263557 PIR:I59360 RefSeq:NP_001034742.1
UniGene:Mm.386765 ProteinModelPortal:P50481 SMR:P50481
MINT:MINT-7009840 STRING:P50481 PhosphoSite:P50481 PRIDE:P50481
Ensembl:ENSMUST00000028302 Ensembl:ENSMUST00000054099 GeneID:16871
KEGG:mmu:16871 EvolutionaryTrace:P50481 NextBio:290838 Bgee:P50481
CleanEx:MM_LHX3 Genevestigator:P50481 GermOnline:ENSMUSG00000026934
Uniprot:P50481
Length = 400
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 163/230 (70%), Positives = 186/230 (80%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC ILDRFILK L+R WH++CLKC +C PLAE+CF+R ++CK+DFFKRFG
Sbjct: 31 IPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFG 90
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLMED +LVCK DYE
Sbjct: 91 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQLS +TGLDMRVVQ
Sbjct: 151 AKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGT-SPKDELKIDLDSN 295
VWFQNRRAKEKRLKKDAGR RW QYFR+MK G + S KD ++ DS+
Sbjct: 206 VWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGSSKSDKDSIQEGQDSD 255
>UNIPROTKB|G3V8E3 [details] [associations]
symbol:Lhx3 "Protein Lhx3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 RefSeq:XP_002726117.1 RefSeq:XP_002729190.1
UniGene:Rn.198623 PRIDE:G3V8E3 Ensembl:ENSRNOT00000025047
GeneID:170671 KEGG:rno:170671 NextBio:621169 Uniprot:G3V8E3
Length = 400
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 163/230 (70%), Positives = 186/230 (80%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC ILDRFILK L+R WH++CLKC +C PLAE+CF+R ++CK+DFFKRFG
Sbjct: 31 IPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFG 90
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLMED +LVCK DYE
Sbjct: 91 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 150
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQLS +TGLDMRVVQ
Sbjct: 151 AKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGT-SPKDELKIDLDSN 295
VWFQNRRAKEKRLKKDAGR RW QYFR+MK G + S KD ++ DS+
Sbjct: 206 VWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGSSKSDKDSIQEGQDSD 255
>UNIPROTKB|G3V9E7 [details] [associations]
symbol:Lhx3 "RCG45383, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 OMA:PLCAGCN UniGene:Rn.198623 GeneID:170671
KEGG:rno:170671 NextBio:621169 RefSeq:XP_001059910.2
RefSeq:XP_001078243.2 Ensembl:ENSRNOT00000045587 Uniprot:G3V9E7
Length = 402
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 163/230 (70%), Positives = 186/230 (80%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC ILDRFILK L+R WH++CLKC +C PLAE+CF+R ++CK+DFFKRFG
Sbjct: 33 IPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFG 92
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLMED +LVCK DYE
Sbjct: 93 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQLS +TGLDMRVVQ
Sbjct: 153 AKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGT-SPKDELKIDLDSN 295
VWFQNRRAKEKRLKKDAGR RW QYFR+MK G + S KD ++ DS+
Sbjct: 208 VWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGSSKSDKDSIQEGQDSD 257
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 163/238 (68%), Positives = 189/238 (79%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
+P+ IP+C GC ILD+FILKVL+R WH++CLKC +C A LA+KCF+R G ++CKEDF
Sbjct: 25 VPLQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKEDF 84
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FKRFGTKCA C+ GIPPTQVVR+AQD VYHL+CFACVMC+RQL TGDEFYLMED +LVCK
Sbjct: 85 FKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCK 144
Query: 185 PDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLD 244
DYE AK D D + KRPRTTITAKQLETLK AY SPKPARHVREQLS +TGLD
Sbjct: 145 EDYETAKQND----DSETGAKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLD 200
Query: 245 MRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGTSPKDELKIDLDSNFSHS 299
MRVVQVWFQNRRAKEKRLKKDAGR RW Q+++S+K G + + E D D+ S S
Sbjct: 201 MRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRNRGSSKTEKESSAD-DAGLSDS 257
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 160/220 (72%), Positives = 179/220 (81%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC I+DRFILKVL+R WH++CLKC +C LAEKCF+R ++CKEDFFKRFG
Sbjct: 25 IPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFKRFG 84
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C+ GIPPTQVVRRAQD VYHL+CFAC++C RQL TGDEFYLMED +LVCK DYE
Sbjct: 85 TKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYET 144
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYN SPKPARHVREQLS +TGLDMRVVQ
Sbjct: 145 AKQREA-----ESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 199
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKG--GTSPKDE 287
VWFQNRRAKEKRLKKDAGR RW QYFR+MK GTS D+
Sbjct: 200 VWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGTSKSDK 239
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 159/226 (70%), Positives = 181/226 (80%)
Query: 64 YMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKED 123
Y IP C GC I+DRFILKVL+R WH++CLKC +C + LA+KCF+R ++CK+D
Sbjct: 19 YSSSQDIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDD 78
Query: 124 FFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
FFKRFGTKCA C+ GIPPTQVVRRAQD VYHL+CFAC++C RQL TGDE+YLMED +LVC
Sbjct: 79 FFKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVC 138
Query: 184 KPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGL 243
K DYE AK ++ D KRPRTTITAKQLETLK AYN SPKPARHVREQLS +TGL
Sbjct: 139 KADYETAKQREA-----DSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGL 193
Query: 244 DMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKG--GTSPKDE 287
DMRVVQVWFQNRRAKEKRLKKDAGR RW QYFR+MK GTS D+
Sbjct: 194 DMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGTSKSDK 239
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 158/226 (69%), Positives = 181/226 (80%)
Query: 64 YMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKED 123
Y IP+C GC I+DRFILKVL+R WH++CLKC++C LAEKCF+R ++CK+D
Sbjct: 19 YTGSPEIPQCAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEKCFSRGDSVYCKDD 78
Query: 124 FFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
FFKRFGTKCA C+ GIPPTQVVRRAQ+ VYHL+CFAC++C RQL TGDEFYLMED +LVC
Sbjct: 79 FFKRFGTKCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVC 138
Query: 184 KPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGL 243
K DYE AK ++ + KRPRTTITAKQLETLK AYN SPKPARHVREQLS +TGL
Sbjct: 139 KADYETAKQREA-----ESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 193
Query: 244 DMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKG--GTSPKDE 287
DMRVVQVWFQNRRAKEKRLKKDAGR RW QYFR+MK G S D+
Sbjct: 194 DMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGNSKSDK 239
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 158/238 (66%), Positives = 185/238 (77%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
+P+ IP+C GC ILD+FILKVL+R WH+ CLKC +C LA++CF+R G ++CKEDF
Sbjct: 22 VPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDF 81
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FKRFGTKC C+ GIPPTQVVR+AQD VYHL+CFAC++C RQL TGDEFYLMED +LVCK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 185 PDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLD 244
DYE AK D D + KRPRTTITAKQLETLK AY SPKPARHVREQLS +TGLD
Sbjct: 142 EDYETAKQND----DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLD 197
Query: 245 MRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGTSPKDELKIDLDSNFSHS 299
MRVVQVWFQNRRAKEKRLKKDAGR RW Q+++S+K GG+ + E + D S S
Sbjct: 198 MRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQEKESSAE-DCGVSDS 254
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 158/238 (66%), Positives = 185/238 (77%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
+P+ IP+C GC ILD+FILKVL+R WH+ CLKC +C LA++CF+R G ++CKEDF
Sbjct: 22 VPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDF 81
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FKRFGTKC C+ GIPPTQVVR+AQD VYHL+CFAC++C RQL TGDEFYLMED +LVCK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 185 PDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLD 244
DYE AK D D + KRPRTTITAKQLETLK AY SPKPARHVREQLS +TGLD
Sbjct: 142 EDYETAKQND----DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLD 197
Query: 245 MRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGTSPKDELKIDLDSNFSHS 299
MRVVQVWFQNRRAKEKRLKKDAGR RW Q+++S+K GG+ + E + D S S
Sbjct: 198 MRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQEKESSAE-DCGVSDS 254
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 159/240 (66%), Positives = 186/240 (77%)
Query: 64 YMPI-ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKE 122
+ P+ A IP+C GC ILD+FILKVL+R WH+ CLKC +C LA++CF+R G ++CKE
Sbjct: 25 FSPLPAEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 84
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
DFFKRFGTKC C+ GIPPTQVVR+AQD VYHL+CFAC++C RQL TGDEFYLMED +LV
Sbjct: 85 DFFKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLV 144
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTG 242
CK DYE AK D D + KRPRTTITAKQLETLK AY SPKPARHVREQLS +TG
Sbjct: 145 CKEDYETAKQND----DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETG 200
Query: 243 LDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGTSPKDELKIDLDSNFSHS 299
LDMRVVQVWFQNRRAKEKRLKKDAGR RW Q+++S+K GG+ + E + D S S
Sbjct: 201 LDMRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQEKESSAE-DCGVSDS 259
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 157/237 (66%), Positives = 185/237 (78%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
+P+ IP+C GC ILD+FILKVL+R WH+ CLKC +C LA++CF+R G ++CKEDF
Sbjct: 22 VPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDF 81
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FKRFGTKC C+ GIPPTQVVR+AQD VYHL+CFAC++C RQL TGDEFYLMED +LVCK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 185 PDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLD 244
DYE AK D D + KRPRTTITAKQLETLK AY SPKPARHVREQLS +TGLD
Sbjct: 142 EDYETAKQND----DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLD 197
Query: 245 MRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKG--GTSPKDELKIDLDSNFSHS 299
MRVVQVWFQNRRAKEKRLKKDAGR RW Q+++S+K G+S +++ D S S
Sbjct: 198 MRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGSSKQEKESSAEDCGVSDS 254
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 153/210 (72%), Positives = 174/210 (82%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP+C GC ILD+FILKVL+R WH+ CLKC +C LAE+CFAR G ++CKEDFFKRFG
Sbjct: 2 IPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFFKRFG 61
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKC C+ GIPPTQVVR+AQD VYHL+CFAC++C+RQL TGDEFYLMED +LVCK DYE
Sbjct: 62 TKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCKEDYET 121
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK D D + KRPRTTITAKQLETLK AY SPKPARHVREQLS +TGLDMRVVQ
Sbjct: 122 AKQND----DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQ 177
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK 279
VWFQNRRAKEKRLKKDAGR RW Q+++S+K
Sbjct: 178 VWFQNRRAKEKRLKKDAGRHRWGQFYKSVK 207
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 157/237 (66%), Positives = 185/237 (78%)
Query: 66 PIAS-IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
P+++ IP+C GC ILD+FILKVL+R WH+ CLKC +C LA++CF+R G ++CKEDF
Sbjct: 1 PLSTEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDF 60
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FKRFGTKC C+ GIPPTQVVR+AQD VYHL CFAC++C RQL TGDEFYLMED +LVCK
Sbjct: 61 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLPCFACIICNRQLATGDEFYLMEDGRLVCK 120
Query: 185 PDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLD 244
DYE AK D D + KRPRTTITAKQLETLK AY SPKPARHVREQLS +TGLD
Sbjct: 121 EDYETAKQND----DSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLD 176
Query: 245 MRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKG--GTSPKDELKIDLDSNFSHS 299
MRVVQVWFQNRRAKEKRLKKDAGR RW Q+++S+K G+S +++ D S S
Sbjct: 177 MRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRSRGSSKQEKESSAEDCGVSDS 233
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 144/195 (73%), Positives = 161/195 (82%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC I+DRFILKVL+R WH++CLKC +C LAEKCF+R ++CKEDFFKRFG
Sbjct: 25 IPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFKRFG 84
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C+ GIPPTQVVRRAQD VYHL+CFAC++C RQL TGDEFYLMED +LVCK DYE
Sbjct: 85 TKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCKADYET 144
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYN SPKPARHVREQLS +TGLDMRVVQ
Sbjct: 145 AKQREA-----ESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 199
Query: 250 VWFQNRRAKEKRLKK 264
VWFQNRRAKEKRLKK
Sbjct: 200 VWFQNRRAKEKRLKK 214
>UNIPROTKB|E2QZZ9 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 EMBL:AAEX03006760 EMBL:AAEX03006761
Ensembl:ENSCAFT00000031319 Uniprot:E2QZZ9
Length = 397
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 145/223 (65%), Positives = 167/223 (74%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC ILDRFILK L+R WH++CLKC +C PLAE+CF+R ++CK+DFFKRFG
Sbjct: 33 IPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFFKRFG 92
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLMED +LVCK DYE
Sbjct: 93 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQLS +TGLDMRVVQ
Sbjct: 153 AKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGTSPKDELK 289
V +E R A R YFRSMK GG + KD ++
Sbjct: 208 V-APRAPPREPR----APRPPXGPYFRSMKRARGGPTDKDSVQ 245
>UNIPROTKB|L7N0D8 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 Ensembl:ENSCAFT00000020228 Uniprot:L7N0D8
Length = 403
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 142/224 (63%), Positives = 162/224 (72%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
IP C GC ILDRFILK L+R WH++CLKC +C PLAE+CF+R ++CK+DFFKRFG
Sbjct: 33 IPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFFKRFG 92
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKCA C++GIPPTQVVRRAQD VYHL+CFACV+C RQL TGDEFYLMED +LVCK DYE
Sbjct: 93 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYET 152
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
AK ++ + KRPRTTITAKQLETLK AYNTSPKPARHVREQLS +TGLDMRVVQ
Sbjct: 153 AKQREA-----EATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMK---GGTS-PKDELK 289
V R YFRSMK GG KD ++
Sbjct: 208 VSAPRPAPGAPRXXXXXXXXXXGPYFRSMKRARGGPQLDKDSVQ 251
>WB|WBGene00000438 [details] [associations]
symbol:ceh-14 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0040040 "thermosensory behavior" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 125/217 (57%), Positives = 151/217 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C C I DRF+ KV R +H+ CL+C C L CF R ++C+ F+K+FGTKC
Sbjct: 48 CSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFYKKFGTKC 107
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM-EDRKLVCKPDYEAAK 191
+ C GI P VVR+A + VYH+ CF C +C R L TG+EFYL+ +D +LVCK DYE A+
Sbjct: 108 SSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVCKDDYEQAR 167
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVW 251
K N L+GD NKRPRTTI+AK LETLK AY TS KPARHVREQL+ +TGLDMRVVQVW
Sbjct: 168 DKHCNELEGDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVW 227
Query: 252 FQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDEL 288
FQNRRAKEKRLKKDAGR RW R+ SP + +
Sbjct: 228 FQNRRAKEKRLKKDAGR-RWKSSNRAESDSNSPIESI 263
>UNIPROTKB|P20271 [details] [associations]
symbol:ceh-14 "Homeobox protein ceh-14" species:6239
"Caenorhabditis elegans" [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016048 "detection of
temperature stimulus" evidence=IMP] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 125/217 (57%), Positives = 151/217 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C C I DRF+ KV R +H+ CL+C C L CF R ++C+ F+K+FGTKC
Sbjct: 48 CSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFYKKFGTKC 107
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM-EDRKLVCKPDYEAAK 191
+ C GI P VVR+A + VYH+ CF C +C R L TG+EFYL+ +D +LVCK DYE A+
Sbjct: 108 SSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVCKDDYEQAR 167
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVW 251
K N L+GD NKRPRTTI+AK LETLK AY TS KPARHVREQL+ +TGLDMRVVQVW
Sbjct: 168 DKHCNELEGDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVW 227
Query: 252 FQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDEL 288
FQNRRAKEKRLKKDAGR RW R+ SP + +
Sbjct: 228 FQNRRAKEKRLKKDAGR-RWKSSNRAESDSNSPIESI 263
>UNIPROTKB|P37137 [details] [associations]
symbol:lhx5 "LIM/homeobox protein Lhx5" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 KO:K09372 CTD:64211 EMBL:L42546 EMBL:BC084744
EMBL:Z11587 PIR:S23803 RefSeq:NP_001084038.1 UniGene:Xl.1047
ProteinModelPortal:P37137 SMR:P37137 GeneID:399270 KEGG:xla:399270
Xenbase:XB-GENE-865965 Uniprot:P37137
Length = 402
Score = 420 (152.9 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 67/120 (55%), Positives = 93/120 (77%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
AGC +GI P+ +VR+A++ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY +A +
Sbjct: 65 AGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYISASS 124
Score = 243 (90.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 186 DYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDM 245
D E A ++ G + + PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+M
Sbjct: 163 DKETANNENEEQNSGTK-RRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNM 221
Query: 246 RVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
RV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 222 RVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|A6QQY6 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 CTD:64211 OMA:SHQGQEM
EMBL:DAAA02045421 EMBL:BC150043 IPI:IPI00867450
RefSeq:NP_001095531.1 UniGene:Bt.88188 Ensembl:ENSBTAT00000004042
GeneID:520759 KEGG:bta:520759 InParanoid:A6QQY6 NextBio:20873176
Uniprot:A6QQY6
Length = 402
Score = 419 (152.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L+EKCF+R G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
AGC GI P+ +VR+A+ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY ++
Sbjct: 65 AGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSS 124
Query: 192 AKDGN 196
K+G+
Sbjct: 125 LKEGS 129
Score = 244 (91.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 186 DYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDM 245
D E A ++ G + + PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+M
Sbjct: 163 DKETANNENEEQNSGTK-RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM 221
Query: 246 RVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
RV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 222 RVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|E2RRP3 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177 KO:K09372
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AAEX03014690
RefSeq:XP_543409.3 ProteinModelPortal:E2RRP3
Ensembl:ENSCAFT00000014514 GeneID:486283 KEGG:cfa:486283
NextBio:20860085 Uniprot:E2RRP3
Length = 402
Score = 419 (152.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L+EKCF+R G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
AGC GI P+ +VR+A+ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY ++
Sbjct: 65 AGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSS 124
Query: 192 AKDGN 196
K+G+
Sbjct: 125 LKEGS 129
Score = 244 (91.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 186 DYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDM 245
D E A ++ G + + PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+M
Sbjct: 163 DKETANNENEEQNSGTK-RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM 221
Query: 246 RVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
RV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 222 RVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|Q9H2C1 [details] [associations]
symbol:LHX5 "LIM/homeobox protein Lhx5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846
GO:GO:0021879 GO:GO:0021527 GO:GO:0021702 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AF291181 EMBL:BC109230
IPI:IPI00022760 RefSeq:NP_071758.1 UniGene:Hs.302029
ProteinModelPortal:Q9H2C1 SMR:Q9H2C1 STRING:Q9H2C1
PhosphoSite:Q9H2C1 DMDM:18202938 PRIDE:Q9H2C1
Ensembl:ENST00000261731 GeneID:64211 KEGG:hsa:64211 UCSC:uc001tvj.1
GeneCards:GC12M113900 HGNC:HGNC:14216 MIM:605992 neXtProt:NX_Q9H2C1
PharmGKB:PA30367 InParanoid:Q9H2C1 PhylomeDB:Q9H2C1
GenomeRNAi:64211 NextBio:66119 Bgee:Q9H2C1 CleanEx:HS_LHX5
Genevestigator:Q9H2C1 GermOnline:ENSG00000089116 Uniprot:Q9H2C1
Length = 402
Score = 419 (152.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L+EKCF+R G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
AGC GI P+ +VR+A+ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY ++
Sbjct: 65 AGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSS 124
Query: 192 AKDGN 196
K+G+
Sbjct: 125 LKEGS 129
Score = 244 (91.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 186 DYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDM 245
D E A ++ G + + PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+M
Sbjct: 163 DKETANNENEEQNSGTK-RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM 221
Query: 246 RVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
RV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 222 RVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>MGI|MGI:107792 [details] [associations]
symbol:Lhx5 "LIM homeobox protein 5" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IGI] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IGI] [GO:0021549 "cerebellum
development" evidence=IGI] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IGI] [GO:0021766 "hippocampus
development" evidence=IMP] [GO:0021846 "cell proliferation in
forebrain" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IGI]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:107792 GO:GO:0005634 GO:GO:0021766
GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879 GO:GO:0021527
GO:GO:0021702 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:U61155 EMBL:BC057585 IPI:IPI00118119
RefSeq:NP_032525.1 UniGene:Mm.5151 ProteinModelPortal:P61375
SMR:P61375 STRING:P61375 PhosphoSite:P61375 PRIDE:P61375
Ensembl:ENSMUST00000031591 GeneID:16873 KEGG:mmu:16873
InParanoid:P61375 NextBio:290846 Bgee:P61375 CleanEx:MM_LHX5
Genevestigator:P61375 GermOnline:ENSMUSG00000029595 Uniprot:P61375
Length = 402
Score = 419 (152.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L+EKCF+R G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
AGC GI P+ +VR+A+ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY ++
Sbjct: 65 AGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSS 124
Query: 192 AKDGN 196
K+G+
Sbjct: 125 LKEGS 129
Score = 244 (91.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 186 DYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDM 245
D E A ++ G + + PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+M
Sbjct: 163 DKETANNENEEQNSGTK-RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM 221
Query: 246 RVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
RV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 222 RVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>RGD|71079 [details] [associations]
symbol:Lhx5 "LIM homeobox 5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007267
"cell-cell signaling" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021549 "cerebellum
development" evidence=ISO] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA;ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71079 GO:GO:0005634 GO:GO:0021766 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021846 GO:GO:0021879 GO:GO:0021527 GO:GO:0021702
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:L35572 IPI:IPI00198471 PIR:I61573
RefSeq:NP_620605.1 UniGene:Rn.54653 ProteinModelPortal:P61376
SMR:P61376 STRING:P61376 Ensembl:ENSRNOT00000001883 GeneID:124451
KEGG:rno:124451 UCSC:RGD:71079 InParanoid:P61376 NextBio:620463
Genevestigator:P61376 GermOnline:ENSRNOG00000001392 Uniprot:P61376
Length = 402
Score = 419 (152.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L+EKCF+R G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
AGC GI P+ +VR+A+ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY ++
Sbjct: 65 AGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSS 124
Query: 192 AKDGN 196
K+G+
Sbjct: 125 LKEGS 129
Score = 244 (91.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 186 DYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDM 245
D E A ++ G + + PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+M
Sbjct: 163 DKETANNENEEQNSGTK-RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM 221
Query: 246 RVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
RV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 222 RVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>ZFIN|ZDB-GENE-980526-116 [details] [associations]
symbol:lhx1b "LIM homeobox 1b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-116 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HSSP:P06601 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
EMBL:BX255908 EMBL:AF001299 EMBL:BC162280 EMBL:BC162303
IPI:IPI00505711 RefSeq:NP_571282.1 UniGene:Dr.277
Ensembl:ENSDART00000021159 GeneID:30454 KEGG:dre:30454 CTD:30454
InParanoid:O13106 OrthoDB:EOG49CQ7Z NextBio:20806849 Uniprot:O13106
Length = 402
Score = 416 (151.5 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 67/127 (52%), Positives = 93/127 (73%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WHA+C++C +C L ++CF+R G L+CK DFF+R+GTKC
Sbjct: 4 CAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDRCFSREGRLYCKNDFFRRYGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GC GI P+ +VR+A+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY +
Sbjct: 64 GGCAQGISPSDLVRKARSKVFHLNCFTCIMCNKQLSTGEELYILDEYKFVCKEDYLNNSN 123
Query: 192 AKDGNCL 198
KD N L
Sbjct: 124 GKDTNLL 130
Score = 244 (91.0 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 199 DGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQ 253
+ D+ N KR PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+MRV+QVWFQ
Sbjct: 168 ENDEQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQ 227
Query: 254 NRRAKEKRLKK-DAGRTRWSQYFRS 277
NRR+KE+R+K+ A R +FRS
Sbjct: 228 NRRSKERRMKQLSALGARRHMFFRS 252
Score = 76 (31.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 19/64 (29%), Positives = 27/64 (42%)
Query: 72 KCGGCGDLILDR-FILKVLERTWHARCLKCHECGAPLA--EKCFARNGLLF-CKEDFFKR 127
KCGGC I + K + +H C C C L+ E+ + + F CKED+
Sbjct: 62 KCGGCAQGISPSDLVRKARSKVFHLNCFTCIMCNKQLSTGEELYILDEYKFVCKEDYLNN 121
Query: 128 FGTK 131
K
Sbjct: 122 SNGK 125
>UNIPROTKB|F1RKD0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
GO:GO:0021937 OMA:SHQGQEM EMBL:CU468670 Ensembl:ENSSSCT00000010817
Uniprot:F1RKD0
Length = 401
Score = 412 (150.1 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 68/125 (54%), Positives = 95/125 (76%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L+EKCF+R G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCEC-TNLSEKCFSREGKLYCKNDFFRRFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
AGC GI P+ +VR+A+ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSS 123
Query: 192 AKDGN 196
K+G+
Sbjct: 124 LKEGS 128
Score = 244 (91.0 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 186 DYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDM 245
D E A ++ G + + PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+M
Sbjct: 162 DKETANNENEEQNSGTK-RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM 220
Query: 246 RVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
RV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 221 RVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 253
>UNIPROTKB|E1BQX0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177 GO:GO:0021937
OMA:SHQGQEM EMBL:AADN02050410 EMBL:AADN02050411 EMBL:AADN02050412
EMBL:AADN02050413 EMBL:AADN02050414 IPI:IPI00574747
Ensembl:ENSGALT00000013517 NextBio:20921461 Uniprot:E1BQX0
Length = 402
Score = 412 (150.1 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 67/125 (53%), Positives = 94/125 (75%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF R G L+CK++FF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFFREGKLYCKKNFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
AGC GI P+ +VR+A++ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY +
Sbjct: 65 AGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYLNSPS 124
Query: 192 AKDGN 196
K+G+
Sbjct: 125 LKEGS 129
Score = 242 (90.2 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 47/72 (65%), Positives = 59/72 (81%)
Query: 207 PRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLKK-D 265
PRTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+MRV+QVWFQNRR+KE+R+K+
Sbjct: 183 PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLS 242
Query: 266 AGRTRWSQYFRS 277
A R +FRS
Sbjct: 243 ALGARRHAFFRS 254
>FB|FBgn0026411 [details] [associations]
symbol:Lim1 species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005525
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
EMBL:AE014298 GO:GO:0043565 GO:GO:0008270 GO:GO:0003924
GO:GO:0006184 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007480 GO:GO:0007479 FlyBase:FBgn0260444
HSSP:P06601 GeneTree:ENSGT00700000104177 eggNOG:NOG257130 KO:K09372
EMBL:AF181631 EMBL:AB034690 RefSeq:NP_572505.1 UniGene:Dm.3025
SMR:Q9V472 IntAct:Q9V472 MINT:MINT-756444 STRING:Q9V472
EnsemblMetazoa:FBtr0071279 GeneID:31813 KEGG:dme:Dmel_CG11354
UCSC:CG11354-RA CTD:31813 FlyBase:FBgn0026411 InParanoid:Q9V472
OMA:GARKMRG OrthoDB:EOG48W9H7 GenomeRNAi:31813 NextBio:775444
Uniprot:Q9V472
Length = 505
Score = 413 (150.4 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 65/127 (51%), Positives = 91/127 (71%)
Query: 66 PIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFF 125
P+ C GC ILD+F+L VLER WHA C++C EC PL +KCF+R L+C+ DFF
Sbjct: 20 PVGVGDPCAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFF 79
Query: 126 KRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKP 185
+R+GTKC+GC GI P+ +VR+ +D V+HLNCF C +C +QL+TG++ Y+++D K +CK
Sbjct: 80 RRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKD 139
Query: 186 DYEAAKA 192
DY KA
Sbjct: 140 DYLLGKA 146
Score = 239 (89.2 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 50/100 (50%), Positives = 66/100 (66%)
Query: 185 PDYEAAKAKDGNCLDGDQPNKR--PRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTG 242
PD + D +KR PRTTI AKQLE LK A+N +PKP RH+REQL+++TG
Sbjct: 226 PDGRGDSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETG 285
Query: 243 LDMRVVQVWFQNRRAKEKRLKK--DAGRTRWSQYFRSMKG 280
L MRV+QVWFQN+R+KE+R+K+ GR + R M+G
Sbjct: 286 LPMRVIQVWFQNKRSKERRMKQITSMGRPPFFGGARKMRG 325
>WB|WBGene00003000 [details] [associations]
symbol:lin-11 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040026 "positive
regulation of vulval development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0045595 "regulation of cell differentiation"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001708 GO:GO:0018991
GO:GO:0040010 GO:GO:0045595 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 Gene3D:2.10.110.10 GO:GO:0007413 GO:GO:0040026
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
KO:K09372 EMBL:Z80221 EMBL:X54355 PIR:T27509 RefSeq:NP_492696.1
ProteinModelPortal:P20154 SMR:P20154 STRING:P20154
EnsemblMetazoa:ZC247.3 GeneID:172893 KEGG:cel:CELE_ZC247.3
UCSC:ZC247.3 CTD:172893 WormBase:ZC247.3 InParanoid:P20154
OMA:NDQQFYP NextBio:877423 Uniprot:P20154
Length = 405
Score = 343 (125.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 53/119 (44%), Positives = 81/119 (68%)
Query: 72 KCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTK 131
+C C ILDR++ VL + WH CL+C +C AP++ CF+R+GL+ CK DF +R+ +
Sbjct: 67 ECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSRRYSQR 126
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
CAGC+ + +VRRA+D V+H+ CF C +C R L+TGD+ Y+ME + VC+ D++ A
Sbjct: 127 CAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQSDFQTA 185
Score = 238 (88.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 48/80 (60%), Positives = 61/80 (76%)
Query: 186 DYEAAKAKDGNCLDGDQPNKR-PRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLD 244
D E KD N D + +R PRTTI AKQLETLK A+ +PKP RH+REQL+ +TGL+
Sbjct: 223 DGEGDCGKD-NSDDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLN 281
Query: 245 MRVVQVWFQNRRAKEKRLKK 264
MRV+QVWFQNRR+KE+R+K+
Sbjct: 282 MRVIQVWFQNRRSKERRMKQ 301
>UNIPROTKB|Q8TE12 [details] [associations]
symbol:LMX1A "LIM homeobox transcription factor 1-alpha"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021542 "dentate
gyrus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021953 "central nervous system
neuron differentiation" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 EMBL:CH471067 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953
EMBL:AY078398 EMBL:AY078391 EMBL:AY078392 EMBL:AY078393
EMBL:AY078394 EMBL:AY078395 EMBL:AY078396 EMBL:AY078397
EMBL:AK127724 EMBL:AL390730 EMBL:AL160058 EMBL:BC119743
EMBL:BC119744 IPI:IPI00152586 IPI:IPI00328299 RefSeq:NP_001167540.1
RefSeq:NP_796372.1 UniGene:Hs.667312 ProteinModelPortal:Q8TE12
SMR:Q8TE12 STRING:Q8TE12 PhosphoSite:Q8TE12 DMDM:27923801
PRIDE:Q8TE12 DNASU:4009 Ensembl:ENST00000294816
Ensembl:ENST00000342310 Ensembl:ENST00000367893 GeneID:4009
KEGG:hsa:4009 UCSC:uc001gcz.2 UCSC:uc021pdy.1 CTD:4009
GeneCards:GC01M165171 HGNC:HGNC:6653 HPA:HPA028051 HPA:HPA030088
MIM:600298 neXtProt:NX_Q8TE12 PharmGKB:PA30416 eggNOG:NOG243427
HOVERGEN:HBG052335 InParanoid:Q8TE12 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN PhylomeDB:Q8TE12 GenomeRNAi:4009 NextBio:15724
ArrayExpress:Q8TE12 Bgee:Q8TE12 CleanEx:HS_LMX1A
Genevestigator:Q8TE12 GermOnline:ENSG00000162761 Uniprot:Q8TE12
Length = 382
Score = 324 (119.1 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 60/120 (50%), Positives = 76/120 (63%)
Query: 71 PK--CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRF 128
PK C GC +ILDRF+L++ + WH +C++C C PL CF R+ L+CK D+ K F
Sbjct: 31 PKSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEKLF 90
Query: 129 GTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
KC GC I P + V RAQ VYHL+CF C +C RQL GDEF L E + L+CK DYE
Sbjct: 91 AVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQ-LLCKGDYE 149
Score = 195 (73.7 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 177 EDRKLVCKPDYEAAK--AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVR 234
+D + +CK + A K A++G D +P KRPRT +T +Q K ++ S KP R VR
Sbjct: 169 DDEESLCKSAHGAGKGTAEEGK--DHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVR 225
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 226 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Score = 87 (35.7 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KCGGC + I + F+++ + +H C C C L ++ + G L CK D+ K
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>UNIPROTKB|F1MC25 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 CTD:4009 KO:K09371 OMA:GNAGMEG EMBL:DAAA02006817
EMBL:DAAA02006818 EMBL:DAAA02006819 EMBL:DAAA02006820
EMBL:DAAA02006821 EMBL:DAAA02006822 IPI:IPI00701360
RefSeq:NP_001178254.1 UniGene:Bt.106456 Ensembl:ENSBTAT00000015947
GeneID:510296 KEGG:bta:510296 NextBio:20869365 Uniprot:F1MC25
Length = 382
Score = 318 (117.0 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 59/120 (49%), Positives = 75/120 (62%)
Query: 71 PK--CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRF 128
PK C GC +I DRF+L++ + WH +C++C C PL CF R+ L+CK D+ K F
Sbjct: 31 PKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEKLF 90
Query: 129 GTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
KC GC I P + V RAQ VYHL+CF C +C RQL GDEF L E + L+CK DYE
Sbjct: 91 AVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQ-LLCKGDYE 149
Score = 199 (75.1 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQ 236
+D + +CK + A K + D +P KRPRT +T +Q K ++ S KP R VRE
Sbjct: 169 DDEESLCKSAHGAGKGASEDSKDHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVRET 227
Query: 237 LSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 228 LAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Score = 87 (35.7 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KCGGC + I + F+++ + +H C C C L ++ + G L CK D+ K
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>UNIPROTKB|F1PDJ1 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:4009 KO:K09371 OMA:GNAGMEG
EMBL:AAEX03018391 EMBL:AAEX03018392 RefSeq:XP_851352.2
Ensembl:ENSCAFT00000021142 GeneID:609061 KEGG:cfa:609061
Uniprot:F1PDJ1
Length = 382
Score = 318 (117.0 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 59/120 (49%), Positives = 75/120 (62%)
Query: 71 PK--CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRF 128
PK C GC +I DRF+L++ + WH +C++C C PL CF R+ L+CK D+ K F
Sbjct: 31 PKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEKLF 90
Query: 129 GTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
KC GC I P + V RAQ VYHL+CF C +C RQL GDEF L E + L+CK DYE
Sbjct: 91 AVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQ-LLCKGDYE 149
Score = 199 (75.1 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 43/90 (47%), Positives = 59/90 (65%)
Query: 177 EDRKLVCKPDYEAAK--AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVR 234
+D + +CK + A K A+DG D +P KRPRT +T +Q K ++ S KP R VR
Sbjct: 169 DDEESLCKSAHGAGKGAAEDGK--DHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVR 225
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 226 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Score = 87 (35.7 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KCGGC + I + F+++ + +H C C C L ++ + G L CK D+ K
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 329 (120.9 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 61/122 (50%), Positives = 78/122 (63%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C PL C+ R+ LFCK+D+ + F KC
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDYQQLFAAKC 115
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL+CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 116 SGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQ-LLCKSDYE--KE 172
Query: 193 KD 194
KD
Sbjct: 173 KD 174
Score = 180 (68.4 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 36/68 (52%), Positives = 46/68 (67%)
Query: 199 DGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRR 256
DG P KRPRT +T +Q K ++ S KP R VRE L+ +TGL +RVVQVWFQN+R
Sbjct: 211 DGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 270
Query: 257 AKEKRLKK 264
AK K+L +
Sbjct: 271 AKIKKLAR 278
>MGI|MGI:1888519 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10090 "Mus musculus" [GO:0001558 "regulation of cell
growth" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0007420
"brain development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021542 "dentate gyrus development" evidence=IMP]
[GO:0021549 "cerebellum development" evidence=IMP] [GO:0021766
"hippocampus development" evidence=IMP] [GO:0021953 "central
nervous system neuron differentiation" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1888519 GO:GO:0005634 GO:GO:0007411
GO:GO:0001558 GO:GO:0046872 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0010468 GeneTree:ENSGT00700000104050
GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953 CTD:4009
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN EMBL:AF226662 IPI:IPI00123446 RefSeq:NP_387501.1
UniGene:Mm.330081 ProteinModelPortal:Q9JKU8 SMR:Q9JKU8
STRING:Q9JKU8 PhosphoSite:Q9JKU8 PRIDE:Q9JKU8
Ensembl:ENSMUST00000028003 Ensembl:ENSMUST00000111377 GeneID:110648
KEGG:mmu:110648 InParanoid:Q9JKU8 NextBio:364391 Bgee:Q9JKU8
CleanEx:MM_LMX1A Genevestigator:Q9JKU8
GermOnline:ENSMUSG00000026686 Uniprot:Q9JKU8
Length = 382
Score = 311 (114.5 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 58/120 (48%), Positives = 74/120 (61%)
Query: 71 PK--CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRF 128
PK C GC +I DRF+L++ + WH +C++C C PL CF R+ L+CK + K F
Sbjct: 31 PKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEKLF 90
Query: 129 GTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
KC GC I P + V RAQ VYHL+CF C +C RQL GDEF L E + L+CK DYE
Sbjct: 91 AVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQ-LLCKGDYE 149
Score = 197 (74.4 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQ 236
+D + +CK + A K + D +P KRPRT +T +Q K ++ S KP R VRE
Sbjct: 169 DDEESLCKSAHGAGKGASEDGKDHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVRET 227
Query: 237 LSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 228 LAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Score = 87 (35.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KCGGC + I + F+++ + +H C C C L ++ + G L CK D+ K
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>RGD|1304784 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10116 "Rattus norvegicus" [GO:0001558 "regulation of cell
growth" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007417 "central nervous system development" evidence=ISO]
[GO:0007420 "brain development" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0021542 "dentate gyrus development"
evidence=IEA;ISO] [GO:0021549 "cerebellum development"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 RGD:1304784
GO:GO:0005634 GO:GO:0007411 GO:GO:0007420 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021549 GO:GO:0030901
GeneTree:ENSGT00700000104050 GO:GO:0021542 GO:GO:0021953 CTD:4009
KO:K09371 OMA:GNAGMEG IPI:IPI00869778 RefSeq:NP_001099437.2
UniGene:Rn.137284 Ensembl:ENSRNOT00000006163 GeneID:289201
KEGG:rno:289201 NextBio:629386 ArrayExpress:F1LRJ8 Uniprot:F1LRJ8
Length = 382
Score = 311 (114.5 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 58/120 (48%), Positives = 74/120 (61%)
Query: 71 PK--CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRF 128
PK C GC +I DRF+L++ + WH +C++C C PL CF R+ L+CK + K F
Sbjct: 31 PKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEKLF 90
Query: 129 GTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
KC GC I P + V RAQ VYHL+CF C +C RQL GDEF L E + L+CK DYE
Sbjct: 91 AVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQ-LLCKGDYE 149
Score = 197 (74.4 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQ 236
+D + +CK + A K + D +P KRPRT +T +Q K ++ S KP R VRE
Sbjct: 169 DDEESLCKSAHGAGKGASEDGKDHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVRET 227
Query: 237 LSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 228 LAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Score = 87 (35.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KCGGC + I + F+++ + +H C C C L ++ + G L CK D+ K
Sbjct: 93 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 150
>UNIPROTKB|B7ZLH2 [details] [associations]
symbol:LMX1B "LMX1B protein" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 HOGENOM:HOG000231629 HOVERGEN:HBG052335 KO:K09371
CTD:4010 EMBL:AL161908 EMBL:AL161731 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 PharmGKB:PA30417
GenomeRNAi:4010 NextBio:15732 EMBL:BC143801 IPI:IPI00956472
RefSeq:NP_001167617.1 SMR:B7ZLH2 STRING:B7ZLH2
Ensembl:ENST00000561065 Uniprot:B7ZLH2
Length = 383
Score = 317 (116.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 59/122 (48%), Positives = 76/122 (62%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 93 SGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDYE--KE 149
Query: 193 KD 194
KD
Sbjct: 150 KD 151
Score = 186 (70.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 167 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 226
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 227 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 317 (116.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 59/122 (48%), Positives = 76/122 (62%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKC 115
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 116 SGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDYE--KE 172
Query: 193 KD 194
KD
Sbjct: 173 KD 174
Score = 186 (70.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 190 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 249
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 250 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 279
>UNIPROTKB|F8W7W6 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
UniGene:Hs.129133 DNASU:4010 GeneID:4010 KEGG:hsa:4010
HGNC:HGNC:6654 GenomeRNAi:4010 NextBio:15732 OMA:NRMEGMM
IPI:IPI00956472 RefSeq:NP_001167617.1 ProteinModelPortal:F8W7W6
SMR:F8W7W6 Ensembl:ENST00000355497 UCSC:uc011maa.2
ArrayExpress:F8W7W6 Bgee:F8W7W6 Uniprot:F8W7W6
Length = 406
Score = 317 (116.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 59/122 (48%), Positives = 76/122 (62%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKC 115
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 116 SGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDYE--KE 172
Query: 193 KD 194
KD
Sbjct: 173 KD 174
Score = 186 (70.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 190 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 249
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 250 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 279
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 317 (116.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 59/122 (48%), Positives = 76/122 (62%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 93 SGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDYE--KE 149
Query: 193 KD 194
KD
Sbjct: 150 KD 151
Score = 186 (70.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 167 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 226
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 227 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 317 (116.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 59/122 (48%), Positives = 76/122 (62%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 93 SGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDYE--KE 149
Query: 193 KD 194
KD
Sbjct: 150 KD 151
Score = 186 (70.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 167 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 226
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 227 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 317 (116.6 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 59/122 (48%), Positives = 76/122 (62%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 93 SGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDYE--KE 149
Query: 193 KD 194
KD
Sbjct: 150 KD 151
Score = 186 (70.5 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 167 EDEDGDMKPAKGQGSQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 226
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 227 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 318 (117.0 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDYQQLFAAKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL+CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 93 SGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQ-LLCKSDYE--KE 149
Query: 193 KD 194
KD
Sbjct: 150 KD 151
Score = 181 (68.8 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 36/68 (52%), Positives = 46/68 (67%)
Query: 199 DGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRR 256
DG P KRPRT +T +Q K ++ S KP R VRE L+ +TGL +RVVQVWFQN+R
Sbjct: 188 DGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
Query: 257 AKEKRLKK 264
AK K+L +
Sbjct: 248 AKMKKLAR 255
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 310 (114.2 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 56/119 (47%), Positives = 77/119 (64%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+L++ + +WH CL+C C L C++R+ L+CK D+ + F TKC
Sbjct: 33 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTMSCYSRDHKLYCKHDYQQLFATKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAK 191
+GC I PT++V RA + VYHL+CF C +C R+L GDEF L E + L+CK DYE K
Sbjct: 93 SGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKEGQ-LLCKTDYEREK 150
Score = 188 (71.2 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 42/90 (46%), Positives = 54/90 (60%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED L KP+ A G+ D P KRPRT +T +Q K ++ S KP R VR
Sbjct: 164 EDEDLDVKPEKGAGGQGKGSD-DSKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 222
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 223 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 252
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 311 (114.5 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 59/122 (48%), Positives = 77/122 (63%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC
Sbjct: 34 CEGCQRPI-DRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDYQQLFAAKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHL+CF C +C RQL GDEF L E + L+CK DYE K
Sbjct: 93 SGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQ-LLCKSDYE--KE 149
Query: 193 KD 194
KD
Sbjct: 150 KD 151
Score = 181 (68.8 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 36/68 (52%), Positives = 46/68 (67%)
Query: 199 DGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRR 256
DG P KRPRT +T +Q K ++ S KP R VRE L+ +TGL +RVVQVWFQN+R
Sbjct: 188 DGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQR 247
Query: 257 AKEKRLKK 264
AK K+L +
Sbjct: 248 AKMKKLAR 255
>ZFIN|ZDB-GENE-051220-1 [details] [associations]
symbol:lhx2b "LIM homeobox 2b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IMP] [GO:0031290 "retinal ganglion cell axon
guidance" evidence=IMP] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0021554 "optic nerve development" evidence=IMP] [GO:0009416
"response to light stimulus" evidence=IMP] [GO:0071632 "optomotor
response" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-051220-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0010468
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0021537 GO:GO:0031290
GO:GO:0007634 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:CNENDAE
EMBL:AL929566 EMBL:BX005074 IPI:IPI00505332 RefSeq:NP_001035099.3
UniGene:Dr.16318 SMR:B0R107 Ensembl:ENSDART00000148020
GeneID:791744 KEGG:dre:791744 CTD:791744 NextBio:20930769
Uniprot:B0R107
Length = 427
Score = 331 (121.6 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 63/168 (37%), Positives = 95/168 (56%)
Query: 27 GICASKLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIAS---IPKCGGCGDLILDR 83
G+ ++H ++ E + +D G MP S + C GCG I DR
Sbjct: 36 GLPGGEMHGVMEEMERRGKSDSATISSAIDM-GETETNMPSISGDRVALCAGCGGKISDR 94
Query: 84 FILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIP 140
+ L +++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI
Sbjct: 95 YYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGIS 154
Query: 141 PTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
+++V RA+DLVYHLNCF C C + L TGD F M+D + C+ +E
Sbjct: 155 ASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFE 201
Score = 132 (51.5 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 41/115 (35%), Positives = 59/115 (51%)
Query: 187 YEAAKA---KDGNCLDGD------QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + DG+ +D D Q KR RT+ QL T+K + + P +QL
Sbjct: 260 YNAALSCNENDGDPMDRDSQYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 319
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR--LKKDAGRTRWSQYFRSMKGGT--SPKDEL 288
+Q TGL RV+QVWFQN RAK +R L+++ + ++ GGT P E+
Sbjct: 320 AQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKASDGSNLAGGTPSGPASEI 374
>ZFIN|ZDB-GENE-990415-133 [details] [associations]
symbol:isl2b "islet2b" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-990415-133 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOVERGEN:HBG004671
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38454 EMBL:AL845510
EMBL:BC095011 EMBL:U09404 IPI:IPI00485578 PIR:I51735
RefSeq:NP_571039.1 UniGene:Dr.20916 ProteinModelPortal:P53407
SMR:P53407 STRING:P53407 Ensembl:ENSDART00000055936 GeneID:30151
KEGG:dre:30151 CTD:30151 InParanoid:P53407 OMA:HAHKQAE
NextBio:20806624 Bgee:P53407 Uniprot:P53407
Length = 358
Score = 306 (112.8 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 57/126 (45%), Positives = 79/126 (62%)
Query: 68 ASIPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDF 124
+ + C GCG I D++IL+V + WHA CLKC EC L E C F R+G +CK D+
Sbjct: 22 SGLAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDY 81
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
+ FG KCA C +G + +V RA+D VYH+ CF C +C+RQL GDEF + D +L+C+
Sbjct: 82 VRLFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSV-RDEELLCR 140
Query: 185 PDYEAA 190
D+ A
Sbjct: 141 ADHGLA 146
Score = 155 (59.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ YN +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 193 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>UNIPROTKB|E1BM14 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 EMBL:DAAA02032103
IPI:IPI00694370 RefSeq:NP_001178104.1 UniGene:Bt.107855
PRIDE:E1BM14 Ensembl:ENSBTAT00000014582 GeneID:783763
KEGG:bta:783763 NextBio:20926288 Uniprot:E1BM14
Length = 406
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 63/164 (38%), Positives = 94/164 (57%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 10 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 68
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVV 145
+++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI +++V
Sbjct: 69 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV 128
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 129 MRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 171
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 240 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 299
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 300 AQKTGLTKRVLQVWFQNARAKFRR 323
Score = 39 (18.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 195 GNCLDGDQPNKRPRTTIT 212
GN L+G +P+ +TT+T
Sbjct: 387 GN-LEGHEPHSPSQTTLT 403
>UNIPROTKB|E2RPC3 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 OMA:CNENDAE
EMBL:AAEX03006892 RefSeq:XP_863668.2 Ensembl:ENSCAFT00000032214
GeneID:491340 KEGG:cfa:491340 Uniprot:E2RPC3
Length = 406
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 63/164 (38%), Positives = 94/164 (57%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 10 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 68
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVV 145
+++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI +++V
Sbjct: 69 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV 128
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 129 MRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 171
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 240 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 299
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 300 AQKTGLTKRVLQVWFQNARAKFRR 323
Score = 39 (18.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 195 GNCLDGDQPNKRPRTTIT 212
GN L+G +P+ +TT+T
Sbjct: 387 GN-LEGHEPHSPSQTTLT 403
>UNIPROTKB|P50458 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0021978 "telencephalon
regionalization" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
KO:K09373 GO:GO:0021978 GO:GO:0000988 eggNOG:COG5576 GO:GO:2000678
EMBL:U11701 EMBL:BC093662 EMBL:BC112185 EMBL:AK094511 EMBL:AF124735
IPI:IPI00032144 RefSeq:NP_004780.3 UniGene:Hs.696425
ProteinModelPortal:P50458 SMR:P50458 STRING:P50458
PhosphoSite:P50458 DMDM:8247936 PaxDb:P50458 PRIDE:P50458
DNASU:9355 Ensembl:ENST00000373615 GeneID:9355 KEGG:hsa:9355
UCSC:uc004boe.1 CTD:9355 GeneCards:GC09P126763 HGNC:HGNC:6594
MIM:603759 neXtProt:NX_P50458 PharmGKB:PA30365 HOGENOM:HOG000034022
HOVERGEN:HBG006262 InParanoid:P50458 OrthoDB:EOG4G4GQK
PhylomeDB:P50458 ChiTaRS:LHX2 GenomeRNAi:9355 NextBio:35033
Bgee:P50458 CleanEx:HS_LHX2 Genevestigator:P50458
GermOnline:ENSG00000106689 Uniprot:P50458
Length = 406
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 63/164 (38%), Positives = 94/164 (57%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 10 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 68
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVV 145
+++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI +++V
Sbjct: 69 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV 128
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 129 MRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 171
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 240 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 299
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 300 AQKTGLTKRVLQVWFQNARAKFRR 323
Score = 39 (18.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 195 GNCLDGDQPNKRPRTTIT 212
GN L+G +P+ +TT+T
Sbjct: 387 GN-LEGHEPHSPSQTTLT 403
>UNIPROTKB|C4TJC6 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 CTD:9355 OrthoDB:EOG4G4GQK OMA:CNENDAE EMBL:CU570921
EMBL:AB473486 RefSeq:NP_001163990.1 UniGene:Ssc.71156 STRING:C4TJC6
Ensembl:ENSSSCT00000006141 GeneID:100156063 KEGG:ssc:100156063
Uniprot:C4TJC6
Length = 406
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 63/164 (38%), Positives = 94/164 (57%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 10 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 68
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVV 145
+++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI +++V
Sbjct: 69 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV 128
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 129 MRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 171
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 240 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 299
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 300 AQKTGLTKRVLQVWFQNARAKFRR 323
Score = 39 (18.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 195 GNCLDGDQPNKRPRTTIT 212
GN L+G +P+ +TT+T
Sbjct: 387 GN-LEGHEPHSPSQTTLT 403
>MGI|MGI:96785 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001843
"neural tube closure" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007498 "mesoderm development" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0021978 "telencephalon regionalization"
evidence=IGI;IMP] [GO:0022008 "neurogenesis" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=IMP] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:96785 GO:GO:0005634 GO:GO:0007411
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0021978 GO:GO:0000988 GO:GO:2000678 CTD:9355
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
EMBL:AF124734 EMBL:BC055741 IPI:IPI00129385 RefSeq:NP_034840.1
UniGene:Mm.142856 ProteinModelPortal:Q9Z0S2 SMR:Q9Z0S2
STRING:Q9Z0S2 PhosphoSite:Q9Z0S2 PRIDE:Q9Z0S2
Ensembl:ENSMUST00000000253 GeneID:16870 KEGG:mmu:16870
InParanoid:Q9Z0S2 OMA:CNENDAE NextBio:290834 Bgee:Q9Z0S2
CleanEx:MM_LHX2 Genevestigator:Q9Z0S2 GermOnline:ENSMUSG00000000247
Uniprot:Q9Z0S2
Length = 406
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 63/164 (38%), Positives = 94/164 (57%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 10 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 68
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVV 145
+++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI +++V
Sbjct: 69 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV 128
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 129 MRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 171
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 240 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 299
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 300 AQKTGLTKRVLQVWFQNARAKFRR 323
Score = 39 (18.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 195 GNCLDGDQPNKRPRTTIT 212
GN L+G +P+ +TT+T
Sbjct: 387 GN-LEGHEPHSPSQTTLT 403
>UNIPROTKB|D4A380 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355
OrthoDB:EOG4G4GQK UniGene:Rn.81063 EMBL:CH473983 IPI:IPI00950401
RefSeq:NP_001100041.1 SMR:D4A380 Ensembl:ENSRNOT00000064507
GeneID:296706 KEGG:rno:296706 NextBio:641689 Uniprot:D4A380
Length = 406
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 63/164 (38%), Positives = 94/164 (57%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 10 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 68
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVV 145
+++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI +++V
Sbjct: 69 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV 128
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 129 MRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 171
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 240 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 299
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 300 AQKTGLTKRVLQVWFQNARAKFRR 323
Score = 39 (18.8 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 195 GNCLDGDQPNKRPRTTIT 212
GN L+G +P+ +TT+T
Sbjct: 387 GN-LEGHEPHSPSQTTLT 403
>UNIPROTKB|G3N0G6 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 OMA:CNENDAE EMBL:DAAA02032103
Ensembl:ENSBTAT00000065104 Uniprot:G3N0G6
Length = 427
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 63/164 (38%), Positives = 94/164 (57%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 10 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 68
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVV 145
+++ WH RCLKC EC L + CF+++G ++CKED+++RF +CA C +GI +++V
Sbjct: 69 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMV 128
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 129 MRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 171
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 240 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 299
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 300 AQKTGLTKRVLQVWFQNARAKFRR 323
>ZFIN|ZDB-GENE-980526-562 [details] [associations]
symbol:isl2a "islet2a" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IGI;IMP] [GO:0048665 "neuron fate specification"
evidence=IGI;IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-562 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0048665 GeneTree:ENSGT00700000104050
GO:GO:0048676 eggNOG:COG5576 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38453 EMBL:X88805
EMBL:U09403 IPI:IPI00483445 PIR:I51734 RefSeq:NP_571045.1
UniGene:Dr.281 ProteinModelPortal:P53406 SMR:P53406
Ensembl:ENSDART00000012862 GeneID:30157 KEGG:dre:30157 CTD:30157
InParanoid:P53406 OMA:RHDSAVQ NextBio:20806628 ArrayExpress:P53406
Bgee:P53406 Uniprot:P53406
Length = 359
Score = 304 (112.1 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 62/146 (42%), Positives = 87/146 (59%)
Query: 68 ASIPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDF 124
+ I C GCG I D++IL+V + WHA CLKC EC L E C F R+G +CK D+
Sbjct: 22 SGIAMCVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
+ FG KCA C +G + +V RA+D VYH+ CF C +C+R L GDEF L D +L+C+
Sbjct: 82 VRLFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSL-RDEELLCR 140
Query: 185 PDYEAA--KAKDGNCLD-GDQPNKRP 207
D+ +A G+ + G+ + RP
Sbjct: 141 ADHGLLMERASAGSPISPGNIHSSRP 166
Score = 155 (59.6 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ YN +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 193 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>UNIPROTKB|E1BM60 [details] [associations]
symbol:ISL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IEA] [GO:0021524
"visceral motor neuron differentiation" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
GO:GO:0031290 GO:GO:0021520 GO:GO:0021524 OMA:RHDSAVQ
EMBL:DAAA02052446 IPI:IPI00701951 UniGene:Bt.34422
Ensembl:ENSBTAT00000022147 NextBio:20928153 Uniprot:E1BM60
Length = 359
Score = 311 (114.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG I D+FIL+V + WHA CLKC EC L E C F R+G +CK D+ + FG
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
KCA C++G + +V RA+D VYH+ CF C +C+RQL GDEF L E +L+C+ D+
Sbjct: 87 IKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLRE-HELLCRADH 143
Score = 147 (56.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 193 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>UNIPROTKB|Q96A47 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0021524 "visceral motor
neuron differentiation" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=TAS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0048666 "neuron development" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:CH471136 GO:GO:0031290
GO:GO:0048935 eggNOG:COG5576 GO:GO:0021520 HOVERGEN:HBG004671
KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR GO:GO:0021524
OMA:RHDSAVQ EMBL:AK001022 EMBL:BC011967 EMBL:BC012136
IPI:IPI00059240 RefSeq:NP_665804.1 UniGene:Hs.444677
ProteinModelPortal:Q96A47 SMR:Q96A47 STRING:Q96A47
PhosphoSite:Q96A47 DMDM:20978495 PRIDE:Q96A47 DNASU:64843
Ensembl:ENST00000290759 GeneID:64843 KEGG:hsa:64843 UCSC:uc002bbw.1
CTD:64843 GeneCards:GC15P076629 HGNC:HGNC:18524 MIM:609481
neXtProt:NX_Q96A47 PharmGKB:PA38566 InParanoid:Q96A47
PhylomeDB:Q96A47 GenomeRNAi:64843 NextBio:66950 Bgee:Q96A47
CleanEx:HS_ISL2 Genevestigator:Q96A47 GermOnline:ENSG00000159556
Uniprot:Q96A47
Length = 359
Score = 311 (114.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG I D+FIL+V + WHA CLKC EC L E C F R+G +CK D+ + FG
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
KCA C++G + +V RA+D VYH+ CF C +C+RQL GDEF L E +L+C+ D+
Sbjct: 87 IKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLRE-HELLCRADH 143
Score = 147 (56.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 193 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>MGI|MGI:109156 [details] [associations]
symbol:Isl2 "insulin related protein 2 (islet 2)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021524 "visceral motor neuron differentiation"
evidence=IGI;IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IGI;IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 MGI:MGI:109156
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 EMBL:CH466522 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 OMA:RHDSAVQ CTD:64843 EMBL:AK013964
EMBL:AC116699 IPI:IPI00110854 RefSeq:NP_081673.2 UniGene:Mm.273996
PDB:3MMK PDBsum:3MMK ProteinModelPortal:Q9CXV0 STRING:Q9CXV0
PhosphoSite:Q9CXV0 PRIDE:Q9CXV0 DNASU:104360
Ensembl:ENSMUST00000034869 GeneID:104360 KEGG:mmu:104360
UCSC:uc009psm.1 InParanoid:Q9CXV0 NextBio:356992 CleanEx:MM_ISL2
Genevestigator:Q9CXV0 GermOnline:ENSMUSG00000032318 Uniprot:Q9CXV0
Length = 359
Score = 311 (114.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG I D+FIL+V + WHA CLKC EC L E C F R+G +CK D+ + FG
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
KCA C++G + +V RA+D VYH+ CF C +C+RQL GDEF L E +L+C+ D+
Sbjct: 87 IKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLRE-HELLCRADH 143
Score = 147 (56.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 193 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>RGD|621849 [details] [associations]
symbol:Isl2 "ISL LIM homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA;ISO] [GO:0048663
"neuron fate commitment" evidence=ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576 GO:GO:0021520
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR
GO:GO:0021524 CTD:64843 EMBL:L35571 IPI:IPI00198543 PIR:A55198
RefSeq:NP_065204.1 UniGene:Rn.10026 PDB:1BW5 PDBsum:1BW5
ProteinModelPortal:P50480 SMR:P50480 STRING:P50480 PRIDE:P50480
GeneID:57233 KEGG:rno:57233 UCSC:RGD:621849 InParanoid:P50480
EvolutionaryTrace:P50480 NextBio:611298 ArrayExpress:P50480
Genevestigator:P50480 GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 311 (114.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG I D+FIL+V + WHA CLKC EC L E C F R+G +CK D+ + FG
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
KCA C++G + +V RA+D VYH+ CF C +C+RQL GDEF L E +L+C+ D+
Sbjct: 87 IKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLRE-HELLCRADH 143
Score = 147 (56.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 194 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
>UNIPROTKB|P50480 [details] [associations]
symbol:Isl2 "Insulin gene enhancer protein ISL-2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 CTD:64843 EMBL:L35571
IPI:IPI00198543 PIR:A55198 RefSeq:NP_065204.1 UniGene:Rn.10026
PDB:1BW5 PDBsum:1BW5 ProteinModelPortal:P50480 SMR:P50480
STRING:P50480 PRIDE:P50480 GeneID:57233 KEGG:rno:57233
UCSC:RGD:621849 InParanoid:P50480 EvolutionaryTrace:P50480
NextBio:611298 ArrayExpress:P50480 Genevestigator:P50480
GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 311 (114.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG I D+FIL+V + WHA CLKC EC L E C F R+G +CK D+ + FG
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
KCA C++G + +V RA+D VYH+ CF C +C+RQL GDEF L E +L+C+ D+
Sbjct: 87 IKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLRE-HELLCRADH 143
Score = 147 (56.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 194 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
>RGD|71076 [details] [associations]
symbol:Lhx2 "LIM homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=ISO] [GO:0001843
"neural tube closure" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0007498 "mesoderm development" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA;ISO] [GO:0021537 "telencephalon development"
evidence=ISO] [GO:0021978 "telencephalon regionalization"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030182 "neuron differentiation" evidence=IEP;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893 GO:GO:0030182
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988 GO:GO:2000678
HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804 IPI:IPI00199572
PIR:A47179 UniGene:Rn.81063 ProteinModelPortal:P36198 SMR:P36198
STRING:P36198 UCSC:RGD:71076 InParanoid:P36198 ArrayExpress:P36198
Genevestigator:P36198 GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 324 (119.1 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 61/138 (44%), Positives = 88/138 (63%)
Query: 56 DYEGIMP-VYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CF 112
D E MP + A++ C GCG I DR+ L +++ WH RCLKC EC L + CF
Sbjct: 36 DTETTMPSISSDRAAL--CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCF 93
Query: 113 ARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGD 171
+++G ++CKED+++RF +CA C +GI +++V RA+DLVYHLNCF C C + L TGD
Sbjct: 94 SKDGSIYCKEDYYRRFSVQRCARCHLGISESEMVMRARDLVYHLNCFTCTTCNKMLTTGD 153
Query: 172 EFYLMEDRKLVCKPDYEA 189
F M+D + C+ +EA
Sbjct: 154 HFG-MKDSLVYCRLHFEA 170
Score = 133 (51.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 238 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 297
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 298 AQKTGLTKRVLQVWFQNARAKFRR 321
>UNIPROTKB|P36198 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893
GO:GO:0030182 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843
GO:GO:0009953 eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804
IPI:IPI00199572 PIR:A47179 UniGene:Rn.81063
ProteinModelPortal:P36198 SMR:P36198 STRING:P36198 UCSC:RGD:71076
InParanoid:P36198 ArrayExpress:P36198 Genevestigator:P36198
GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 324 (119.1 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 61/138 (44%), Positives = 88/138 (63%)
Query: 56 DYEGIMP-VYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CF 112
D E MP + A++ C GCG I DR+ L +++ WH RCLKC EC L + CF
Sbjct: 36 DTETTMPSISSDRAAL--CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCF 93
Query: 113 ARNGLLFCKEDFFKRFGT-KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGD 171
+++G ++CKED+++RF +CA C +GI +++V RA+DLVYHLNCF C C + L TGD
Sbjct: 94 SKDGSIYCKEDYYRRFSVQRCARCHLGISESEMVMRARDLVYHLNCFTCTTCNKMLTTGD 153
Query: 172 EFYLMEDRKLVCKPDYEA 189
F M+D + C+ +EA
Sbjct: 154 HFG-MKDSLVYCRLHFEA 170
Score = 133 (51.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 238 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 297
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 298 AQKTGLTKRVLQVWFQNARAKFRR 321
>UNIPROTKB|B7ZP59 [details] [associations]
symbol:lhx1 "Homeobox protein" species:8355 "Xenopus
laevis" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0072178 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077
RefSeq:NP_001084128.1 UniGene:Xl.32655 GeneID:399323
KEGG:xla:399323 Xenbase:XB-GENE-856460 EMBL:BC169338 EMBL:BC169340
SMR:B7ZP59 Uniprot:B7ZP59
Length = 403
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 82/178 (46%), Positives = 109/178 (61%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+RFGTKC
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY----E 188
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNNNN 123
Query: 189 AAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
AAK + G P+ P + + + N S K A + E Q+ G R
Sbjct: 124 AAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANVSDKEAG-INENDDQNLGAKRR 180
Score = 247 (92.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 55/100 (55%), Positives = 70/100 (70%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+ + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 154 DSESANVSDKEAGINENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 213
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 214 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 253
>UNIPROTKB|P29674 [details] [associations]
symbol:lhx1 "LIM/homeobox protein Lhx1" species:8355
"Xenopus laevis" [GO:0003002 "regionalization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009798 "axis specification" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0030903 "notochord
development" evidence=IMP] [GO:0035565 "regulation of pronephros
size" evidence=IGI] [GO:0039003 "pronephric field specification"
evidence=IGI] [GO:0039020 "pronephric nephron tubule development"
evidence=IGI] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043009 "chordate embryonic development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0048793 "pronephros development" evidence=IGI;IMP] [GO:0072080
"nephron tubule development" evidence=IGI] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0022008 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0042074 GO:GO:0009798 GO:GO:0043009
GO:GO:0030903 GO:GO:0039020 GO:GO:0035565 CTD:3975
HOVERGEN:HBG006263 KO:K09372 EMBL:X63889 EMBL:AF013242 PIR:S23802
RefSeq:NP_001084128.1 UniGene:Xl.32655 ProteinModelPortal:P29674
SMR:P29674 GeneID:399323 KEGG:xla:399323 Xenbase:XB-GENE-856460
GO:GO:0039003 Uniprot:P29674
Length = 403
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 82/178 (46%), Positives = 109/178 (61%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+RFGTKC
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY----E 188
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNNNN 123
Query: 189 AAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
AAK + G P+ P + + + N S K A + E Q+ G R
Sbjct: 124 AAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANVSDKEAG-INENDDQNLGAKRR 180
Score = 247 (92.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 55/100 (55%), Positives = 70/100 (70%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+ + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 154 DSESANVSDKEAGINENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 213
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 214 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 253
>WB|WBGene00003167 [details] [associations]
symbol:mec-3 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IMP] [GO:0007638 "mechanosensory behavior" evidence=IMP]
[GO:0009612 "response to mechanical stimulus" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0016358 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0001190 GO:GO:0000977
GeneTree:ENSGT00700000104050 GO:GO:0007638 eggNOG:NOG257130
EMBL:L02877 EMBL:M20244 EMBL:Z81054 PIR:S28390 PIR:T20458
RefSeq:NP_001023111.1 RefSeq:NP_001023112.1 UniGene:Cel.19754
ProteinModelPortal:P09088 SMR:P09088 STRING:P09088 PaxDb:P09088
EnsemblMetazoa:F01D4.6a GeneID:177938 KEGG:cel:CELE_F01D4.6
UCSC:F01D4.6a CTD:177938 WormBase:F01D4.6a WormBase:F01D4.6b
HOGENOM:HOG000064530 InParanoid:P09088 KO:K09376 OMA:VIDSIGV
NextBio:899038 ArrayExpress:P09088 Uniprot:P09088
Length = 321
Score = 259 (96.2 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 45/120 (37%), Positives = 74/120 (61%)
Query: 72 KCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGT- 130
KC C + I DR+I ++ R++H C+KC C +PLAEKCF +NG ++C + ++K
Sbjct: 28 KCNCCNEQIYDRYIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIH 87
Query: 131 KCAGCEMGIPPTQVVRRAQ-DLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV--CKPDY 187
+CAGC+ G+ PT +V + + LV+H+ C C +C R L+ G++ L++D + C Y
Sbjct: 88 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQI-LVDDTMMTVSCMSHY 146
Score = 192 (72.6 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 197 CLDGDQPNKR--PRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQN 254
C D + KR PRTTI QL+ L ++ +PKP++H R +L+ +TGL MRV+QVWFQN
Sbjct: 208 CDDDSRMLKRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQVWFQN 267
Query: 255 RRAKEKRLK 263
RR+KE+RLK
Sbjct: 268 RRSKERRLK 276
>ZFIN|ZDB-GENE-041014-332 [details] [associations]
symbol:lmx1a "LIM homeobox transcription factor 1,
alpha" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-041014-332 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
HOGENOM:HOG000231629 CTD:4009 HOVERGEN:HBG052335 EMBL:BX296562
IPI:IPI00496510 RefSeq:NP_001020669.1 UniGene:Dr.108111
Ensembl:ENSDART00000019059 GeneID:558036 KEGG:dre:558036
eggNOG:NOG302270 InParanoid:Q5RI65 OMA:RLYSMQD OrthoDB:EOG4P8FJW
NextBio:20882278 Uniprot:Q5RI65
Length = 366
Score = 277 (102.6 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 51/112 (45%), Positives = 66/112 (58%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC +LI DR++L+V + WH RCL C C PL + CF RN L+CK D+ K F +C
Sbjct: 26 CEGCNELIRDRYLLRVQDGLWHERCLHCASCREPLKDTCFLRNKTLYCKRDYQKLFVVRC 85
Query: 133 AGCEMGIPPTQVVRRAQ-DLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
GC I P+++V RAQ V+HL CF C +C +L GD L D L C
Sbjct: 86 QGCSEIISPSELVMRAQGSAVFHLRCFCCCVCGCRLQKGDHCVLRGDG-LFC 136
Score = 173 (66.0 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 205 KRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRL 262
KRPRT +T +Q K ++ S KP R VRE L+ +TGL +RVVQVWFQN+RAK K+L
Sbjct: 186 KRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKL 243
Score = 77 (32.2 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
C GC I ++R QD ++H C C C L D +L ++ L CK DY+
Sbjct: 26 CEGCNELIRDRYLLR-VQDGLWHERCLHCASCREPLK--DTCFL-RNKTLYCKRDYQ 78
Score = 77 (32.2 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 70 IPKCGGCGDLIL-DRFILKVL-ERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFF 125
+ +C GC ++I +++ +H RC C CG L + C R LFC F
Sbjct: 82 VVRCQGCSEIISPSELVMRAQGSAVFHLRCFCCCVCGCRLQKGDHCVLRGDGLFCATHFH 141
Query: 126 KRFGT 130
+ +
Sbjct: 142 NQLAS 146
>MGI|MGI:1306803 [details] [associations]
symbol:Lhx6 "LIM homeobox protein 6" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021799 "cerebral cortex radially
oriented cell migration" evidence=IMP] [GO:0021800 "cerebral cortex
tangential migration" evidence=IMP] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=IMP] [GO:0021877
"forebrain neuron fate commitment" evidence=IGI] [GO:0021884
"forebrain neuron development" evidence=IGI] [GO:0021895 "cerebral
cortex neuron differentiation" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1306803 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021884
GO:GO:0021877 GO:GO:0021853 GO:GO:0021800 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 GO:GO:0048469 GO:GO:0021799 CTD:26468
HOGENOM:HOG000038965 HOVERGEN:HBG006261 KO:K09375 OrthoDB:EOG4GTKD8
EMBL:AJ000337 EMBL:AB031040 EMBL:AB031039 EMBL:AL773525
EMBL:BC065077 IPI:IPI00457813 IPI:IPI00457814 RefSeq:NP_001076595.1
RefSeq:NP_001076596.1 RefSeq:NP_032526.2 UniGene:Mm.12881
ProteinModelPortal:Q9R1R0 SMR:Q9R1R0 STRING:Q9R1R0 PRIDE:Q9R1R0
Ensembl:ENSMUST00000112961 Ensembl:ENSMUST00000112963
Ensembl:ENSMUST00000112966 Ensembl:ENSMUST00000148852 GeneID:16874
KEGG:mmu:16874 InParanoid:Q6P1H2 NextBio:290850 Bgee:Q9R1R0
Genevestigator:Q9R1R0 Uniprot:Q9R1R0
Length = 363
Score = 411 (149.7 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 90/216 (41%), Positives = 127/216 (58%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKE 122
+P A C CG ILDR++LKV WH RCL+C C L ++ C+ +N ++CK
Sbjct: 62 VPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKM 121
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
D+F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++
Sbjct: 122 DYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVL 180
Query: 183 CKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAYNT 225
C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 181 CRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 240
Query: 226 SPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
P ++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 241 DNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK 276
Score = 37 (18.1 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 282 TSPKDELKIDLDSNFSHSHGK 302
T+P LK DLD S S G+
Sbjct: 337 TAPPVHLKADLDGPLS-SRGE 356
>FB|FBgn0013751 [details] [associations]
symbol:Awh "Arrowhead" species:7227 "Drosophila melanogaster"
[GO:0007444 "imaginal disc development" evidence=IMP] [GO:0005634
"nucleus" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
EMBL:AE014296 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007444 EMBL:U82539 EMBL:AY071197
EMBL:BT025230 RefSeq:NP_523907.2 RefSeq:NP_728906.1 UniGene:Dm.6063
ProteinModelPortal:Q8IRC7 SMR:Q8IRC7 PRIDE:Q8IRC7
EnsemblMetazoa:FBtr0073156 GeneID:38451 KEGG:dme:Dmel_CG1072
UCSC:CG1072-RA CTD:38451 FlyBase:FBgn0013751 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 HOGENOM:HOG000214908 InParanoid:Q8IRC7
OMA:IHDRYLL OrthoDB:EOG42BVRJ PhylomeDB:Q8IRC7 GenomeRNAi:38451
NextBio:808729 Bgee:Q8IRC7 GermOnline:CG1072 Uniprot:Q8IRC7
Length = 275
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 90/200 (45%), Positives = 119/200 (59%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFKRFGT 130
C CG+ I DRF L+V +WHA CL+C C PL + CF R ++CK D+ K FG
Sbjct: 8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGA 67
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EA 189
KC+ C GI + VRRA++LV+HL CFAC C RQL+TG++F LM+DR L CK Y E
Sbjct: 68 KCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVL-CKAHYLET 126
Query: 190 AK----AKDGNCLDGD----QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDT 241
+ + D C DGD KR RTT T +QL+ L+ + P E+++ T
Sbjct: 127 VEGGTTSSDEGC-DGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVT 185
Query: 242 GLDMRVVQVWFQNRRAKEKR 261
GL RV QVWFQN RA++K+
Sbjct: 186 GLSKRVTQVWFQNSRARQKK 205
>ZFIN|ZDB-GENE-980526-347 [details] [associations]
symbol:lhx1a "LIM homeobox 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001071 "nucleic acid
binding transcription factor activity" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0043234
"protein complex" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0060059 "embryonic
retina morphogenesis in camera-type eye" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072178
"nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive
streak formation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0021871 "forebrain regionalization"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-347 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 EMBL:L37802 IPI:IPI00485723 RefSeq:NP_571291.1
UniGene:Dr.364 ProteinModelPortal:Q90476 SMR:Q90476 STRING:Q90476
Ensembl:ENSDART00000005641 GeneID:30463 KEGG:dre:30463 CTD:30463
InParanoid:Q90476 OMA:PSEMNEG NextBio:20806857 ArrayExpress:Q90476
Bgee:Q90476 Uniprot:Q90476
Length = 405
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 72/127 (56%), Positives = 92/127 (72%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+RFGTKC
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA-AK 191
AGC GI P +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY +
Sbjct: 64 AGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKDDYLSNTN 123
Query: 192 AKDGNCL 198
KD N L
Sbjct: 124 GKDSNLL 130
Score = 251 (93.4 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 65/143 (45%), Positives = 86/143 (60%)
Query: 156 NCFACVMCAR-QLNTGDEFYLMEDRKLVCKPDYEAAKAKD---GNCLDGDQP--NKR--P 207
N + C+ L+ + L +D K D E A D GN + DQ KR P
Sbjct: 128 NLLSVTACSDPSLSPDSQDQLQDDVK-----DAEIANLSDKETGNNENDDQNLGGKRRGP 182
Query: 208 RTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLKK-DA 266
RTTI AKQLETLK A+ +PKP RH+REQL+Q+TGL+MRV+QVWFQNRR+KE+R+K+ A
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSA 242
Query: 267 GRTRWSQYFRSMKGGTSPKDELK 289
R +FRS + + D L+
Sbjct: 243 LGARRHAFFRSPRRMRTLVDRLE 265
>ZFIN|ZDB-GENE-050417-210 [details] [associations]
symbol:lhx9 "LIM homeobox 9" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-050417-210 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG CTD:56956
EMBL:AB188254 EMBL:BX004971 EMBL:BX511183 EMBL:BC163023
EMBL:BC163060 EMBL:BC163073 IPI:IPI00635283 RefSeq:NP_001032320.1
UniGene:Dr.42632 ProteinModelPortal:Q1LWV4 SMR:Q1LWV4 STRING:Q1LWV4
Ensembl:ENSDART00000054807 GeneID:550405 KEGG:dre:550405
InParanoid:Q1LWV4 NextBio:20879654 Bgee:Q1LWV4 Uniprot:Q1LWV4
Length = 396
Score = 314 (115.6 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 58/130 (44%), Positives = 82/130 (63%)
Query: 65 MPIASIPK---CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLF 119
MP S K C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++
Sbjct: 60 MPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 119
Query: 120 CKEDFFKRFGT-KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMED 178
CKED+++RF +CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D
Sbjct: 120 CKEDYYRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFG-MKD 178
Query: 179 RKLVCKPDYE 188
+ C+ +E
Sbjct: 179 NLVYCRVHFE 188
Score = 128 (50.1 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 324
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 325 NVLRQENG 332
>ZFIN|ZDB-GENE-980526-484 [details] [associations]
symbol:lhx5 "LIM homeobox 5" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP;IDA] [GO:0001654 "eye development" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-484 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001654
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F EMBL:L42547
EMBL:BC098523 IPI:IPI00509409 RefSeq:NP_571293.1 UniGene:Dr.75068
ProteinModelPortal:P52889 SMR:P52889 STRING:P52889
Ensembl:ENSDART00000080693 GeneID:30465 KEGG:dre:30465 CTD:64211
InParanoid:P52889 OMA:SHQGQEM NextBio:20806859 Bgee:P52889
Uniprot:P52889
Length = 399
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 72/125 (57%), Positives = 96/125 (76%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WHA+C++C EC L EKCF+R+G L+CK DFF+RFGTKC
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFFRRFGTKC 64
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
AGC GI P+ +VRRA+ V+HLNCF C++C +QL+TG+E Y++++ K VCK DY +A A
Sbjct: 65 AGCLQGISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYLSASA 124
Query: 193 -KDGN 196
K+ N
Sbjct: 125 IKEVN 129
Score = 247 (92.0 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 55/108 (50%), Positives = 74/108 (68%)
Query: 175 LMEDRKLVCKPDYEAAKAKDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKP 229
+ +D K + D + KD N + ++ N KR PRTTI AKQLETLK A+ +PKP
Sbjct: 149 IQDDTK---ETDNSTSSDKDTNNNENEEQNSCTKRRGPRTTIKAKQLETLKAAFVATPKP 205
Query: 230 ARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFR 276
RH+REQL+Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FR
Sbjct: 206 TRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFR 253
>FB|FBgn0036274 [details] [associations]
symbol:CG4328 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0006911 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0048813
GeneTree:ENSGT00700000104050 EMBL:BT050501 RefSeq:NP_648567.2
UniGene:Dm.27132 SMR:Q9VTW3 IntAct:Q9VTW3 MINT:MINT-301655
EnsemblMetazoa:FBtr0301071 GeneID:39405 KEGG:dme:Dmel_CG4328
UCSC:CG4328-RA FlyBase:FBgn0036274 InParanoid:Q9VTW3 OMA:ETNKENC
OrthoDB:EOG4B8GVN GenomeRNAi:39405 NextBio:813480 Uniprot:Q9VTW3
Length = 544
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 92/245 (37%), Positives = 140/245 (57%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
M + +C C I DR+I++V+E ++H CLKC C L C+AR G L+C+ D+
Sbjct: 191 MASPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDY 250
Query: 125 FKRF-GTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ + C GC + I ++V R + V+HL CFACV+C L G++ Y+++ +L C
Sbjct: 251 ERLYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQ-YVVKQGQLFC 309
Query: 184 KPDYEAA----KAKD--GN-----CLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARH 232
+ DYE + D G+ LDG + KRPRT + +Q K ++ SPKP R
Sbjct: 310 RFDYEKEVEMLQGYDFYGDELFPPKLDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRK 369
Query: 233 VREQLSQDTGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDL 292
VRE L++DTGL +R+VQVWFQN+RAK K+++K A + S KG + +D + L
Sbjct: 370 VRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPPS------KGASDSQDSQE-SL 422
Query: 293 DSNFS 297
DS+ +
Sbjct: 423 DSSLA 427
Score = 200 (75.5 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 46/116 (39%), Positives = 65/116 (56%)
Query: 198 LDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRA 257
LDG + KRPRT + +Q K ++ SPKP R VRE L++DTGL +R+VQVWFQN+RA
Sbjct: 335 LDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRA 394
Query: 258 KEKRLKKDAGR---------TRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
K K+++K A + ++ SQ T KDE D +S + T+
Sbjct: 395 KVKKIQKKAKQEPPSKGASDSQDSQESLDSSLATKIKDEAHSDSESQLESPYSTTS 450
>FB|FBgn0052105 [details] [associations]
symbol:CG32105 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
eggNOG:NOG243427 HSSP:P50480 EMBL:BT003467 RefSeq:NP_729801.1
UniGene:Dm.15353 SMR:Q9VTW5 IntAct:Q9VTW5 MINT:MINT-307196
EnsemblMetazoa:FBtr0075953 GeneID:39406 KEGG:dme:Dmel_CG32105
UCSC:CG32105-RB FlyBase:FBgn0052105 InParanoid:Q9VTW5 OMA:CCHAILP
OrthoDB:EOG4BCC40 GenomeRNAi:39406 NextBio:813485 Uniprot:Q9VTW5
Length = 640
Score = 258 (95.9 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 48/118 (40%), Positives = 67/118 (56%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GCG I DRF++ V + WH +CL C CG L C+ RN L+CK D+ + FG KC
Sbjct: 275 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKC 334
Query: 133 AGCEMGIPPTQVVRRA-QDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC-KPDYE 188
+ C I P ++V R + V+HL CF C C L G++F ++ D +L C + D E
Sbjct: 335 SSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQF-MLRDGQLFCYRHDLE 391
Score = 199 (75.1 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 199 DGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAK 258
DG + KRPRT +T++Q + K +++ SPKP R VRE L++DTGL +RVVQVWFQN+RAK
Sbjct: 419 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 478
Query: 259 EKRLKKDA 266
K++++ A
Sbjct: 479 MKKIQRKA 486
>UNIPROTKB|H7C0H1 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
EMBL:AC006450 HGNC:HGNC:6594 ChiTaRS:LHX2 OMA:CNENDAE EMBL:AL158052
ProteinModelPortal:H7C0H1 Ensembl:ENST00000446480 Uniprot:H7C0H1
Length = 412
Score = 303 (111.7 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 63/172 (36%), Positives = 94/172 (54%)
Query: 32 KLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDRFILKV 88
++H ++ E + +D G MP S + C GCG I DR+ L
Sbjct: 8 EVHGVIDEMDRRAKSEAPAISSAID-RGDTETTMPSISSDRAALCAGCGGKISDRYYLLA 66
Query: 89 LERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFF--------KRFGT-KCAGCEM 137
+++ WH RCLKC EC L + CF+++G ++CKED++ +RF +CA C +
Sbjct: 67 VDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYSPSLHGPYRRFSVQRCARCHL 126
Query: 138 GIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
GI +++V RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 127 GISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 177
Score = 133 (51.9 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 36/84 (42%), Positives = 45/84 (53%)
Query: 187 YEAAKA---KDGNCLDGDQP------NKRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + D LD DQP KR RT+ QL T+K + + P +QL
Sbjct: 246 YNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 305
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 306 AQKTGLTKRVLQVWFQNARAKFRR 329
Score = 39 (18.8 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 195 GNCLDGDQPNKRPRTTIT 212
GN L+G +P+ +TT+T
Sbjct: 393 GN-LEGHEPHSPSQTTLT 409
>UNIPROTKB|P48742 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0035502 "metanephric part of
ureteric bud development" evidence=IEA] [GO:0035849 "nephric duct
elongation" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEA] [GO:0048793
"pronephros development" evidence=IEA] [GO:0072177 "mesonephric
duct development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072278 "metanephric comma-shaped
body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal
vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric
S-shaped body morphogenesis" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001655 "urogenital system development" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0021549
"cerebellum development" evidence=ISS] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:0072077 "renal vesicle morphogenesis"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0060429 "epithelium development"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG EMBL:U14755 EMBL:AC023315
EMBL:AC025882 EMBL:BC111936 EMBL:BC101674 IPI:IPI00550117
PIR:G01507 RefSeq:NP_005559.2 UniGene:Hs.443727
ProteinModelPortal:P48742 SMR:P48742 STRING:P48742
PhosphoSite:P48742 DMDM:60416412 PaxDb:P48742 PRIDE:P48742
DNASU:3975 Ensembl:ENST00000254457 GeneID:3975 KEGG:hsa:3975
UCSC:uc002hnh.2 GeneCards:GC17P035294 HGNC:HGNC:6593 HPA:CAB002770
MIM:601999 neXtProt:NX_P48742 PharmGKB:PA30364 InParanoid:P48742
PhylomeDB:P48742 GenomeRNAi:3975 NextBio:15580 ArrayExpress:P48742
Bgee:P48742 CleanEx:HS_LHX1 Genevestigator:P48742
GermOnline:ENSG00000132130 GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 Uniprot:P48742
Length = 406
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 80/179 (44%), Positives = 110/179 (61%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
AK+ + G P+ P + ++ + N S K A E Q+ G R
Sbjct: 124 VAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGS-NENDDQNLGAKRR 181
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 55/100 (55%), Positives = 70/100 (70%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+ + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|A2I8Z7 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:223369
"Astyanax fasciatus" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HOVERGEN:HBG006262 EMBL:EF175738
ProteinModelPortal:A2I8Z7 Uniprot:A2I8Z7
Length = 377
Score = 313 (115.2 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 57/131 (43%), Positives = 83/131 (63%)
Query: 65 MPIASIPK---CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLF 119
MP S K C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++
Sbjct: 41 MPSVSPEKPALCAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIY 100
Query: 120 CKEDFFKRFGT-KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMED 178
CKED+++RF +CA C +GI +++V RA+D VYHL+CF C C + L TGD F + E+
Sbjct: 101 CKEDYYRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTSCNKTLTTGDHFGMREN 160
Query: 179 RKLVCKPDYEA 189
+ C+ +E+
Sbjct: 161 L-VYCRAHFES 170
Score = 122 (48.0 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q K RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 246 QKTKXMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 305
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 306 NVLRQENG 313
>UNIPROTKB|A7Z015 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008045 "motor neuron axon guidance" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0010842 "retina layer
formation" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0021937 "cerebellar
Purkinje cell-granule cell precursor cell signaling involved in
regulation of granule cell precursor cell proliferation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0007267
"cell-cell signaling" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0001822 "kidney development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0001702 "gastrulation with
mouth forming second" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=ISS] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0035852 "horizontal cell localization"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0001657
GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537
GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:0048793
GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0001071
GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:DAAA02048434 EMBL:BC153212 IPI:IPI00711186
RefSeq:NP_001098917.1 RefSeq:XP_003583582.1 UniGene:Bt.104440
Ensembl:ENSBTAT00000047689 GeneID:616699 GeneID:786041
KEGG:bta:616699 KEGG:bta:786041 InParanoid:A7Z015 NextBio:20927654
Uniprot:A7Z015
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|E2RMA8 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060429 "epithelium development"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0009880
"embryonic pattern specification" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:2000543
"positive regulation of gastrulation" evidence=ISS] [GO:0040019
"positive regulation of embryonic development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0007267 "cell-cell signaling"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA]
[GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA]
[GO:0048793 "pronephros development" evidence=IEA] [GO:0035852
"horizontal cell localization" evidence=IEA] [GO:0035849 "nephric
duct elongation" evidence=IEA] [GO:0032525 "somite rostral/caudal
axis specification" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190
GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880
GO:GO:0001658 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852 GO:GO:0072283
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:AAEX03006612
RefSeq:XP_003639347.1 ProteinModelPortal:E2RMA8 SMR:E2RMA8
Ensembl:ENSCAFT00000028326 GeneID:100856649 KEGG:cfa:100856649
NextBio:20895890 Uniprot:E2RMA8
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|F2Z531 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000543 "positive regulation of
gastrulation" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] [GO:0060322 "head
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060067 "cervix development" evidence=IEA]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0048793 "pronephros development" evidence=IEA]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0035849 "nephric duct elongation"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0021871 "forebrain regionalization" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0045892 GO:GO:0001764 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:CU929499 RefSeq:XP_003131754.1 UniGene:Ssc.22980
ProteinModelPortal:F2Z531 SMR:F2Z531 Ensembl:ENSSSCT00000019256
GeneID:100513681 KEGG:ssc:100513681 Uniprot:F2Z531
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|P63008 [details] [associations]
symbol:Lhx1 "LIM/homeobox protein Lhx1" species:10036
"Mesocricetus auratus" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:X81407 PIR:I48186
ProteinModelPortal:P63008 SMR:P63008 Uniprot:P63008
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|Q5IS44 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9598 "Pan
troglodytes" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665284 RefSeq:NP_001029088.1
UniGene:Ptr.6553 ProteinModelPortal:Q5IS44 SMR:Q5IS44 GeneID:454600
KEGG:ptr:454600 InParanoid:Q5IS44 NextBio:20836212 Uniprot:Q5IS44
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|Q5IS89 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:39432
"Saimiri boliviensis boliviensis" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665239 RefSeq:XP_003929119.1
ProteinModelPortal:Q5IS89 SMR:Q5IS89 GeneID:101033157
Uniprot:Q5IS89
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|Q5ISK2 [details] [associations]
symbol:Q5ISK2 "LIM homeobox protein 1" species:9541 "Macaca
fascicularis" [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0001657 "ureteric bud development"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0008045 "motor
neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical
structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009880 "embryonic pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY650378 ProteinModelPortal:Q5ISK2
Uniprot:Q5ISK2
Length = 403
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 60
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 61 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 120
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 121 VAKENSLHSATTGSDPSLSP 140
Score = 253 (94.1 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 152 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 211
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 212 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 251
>MGI|MGI:99783 [details] [associations]
symbol:Lhx1 "LIM homeobox protein 1" species:10090 "Mus
musculus" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=IGI;IMP] [GO:0001655 "urogenital system
development" evidence=IMP] [GO:0001657 "ureteric bud development"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001705 "ectoderm formation" evidence=IGI]
[GO:0001706 "endoderm formation" evidence=IMP] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0001822 "kidney development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007267 "cell-cell
signaling" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI;IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0009880
"embryonic pattern specification" evidence=IGI] [GO:0009948
"anterior/posterior axis specification" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0021527
"spinal cord association neuron differentiation" evidence=IGI]
[GO:0021549 "cerebellum development" evidence=IGI] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IGI]
[GO:0021871 "forebrain regionalization" evidence=IGI] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IMP] [GO:0035846 "oviduct epithelium
development" evidence=IMP] [GO:0035847 "uterine epithelium
development" evidence=IMP] [GO:0035849 "nephric duct elongation"
evidence=IMP] [GO:0035852 "horizontal cell localization"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IGI;IMP] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IMP] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0060065 "uterus development" evidence=IMP] [GO:0060066 "oviduct
development" evidence=IMP] [GO:0060067 "cervix development"
evidence=IMP] [GO:0060068 "vagina development" evidence=IMP]
[GO:0060322 "head development" evidence=IGI] [GO:0060429
"epithelium development" evidence=IMP] [GO:0061205 "paramesonephric
duct development" evidence=IMP] [GO:0072001 "renal system
development" evidence=IGI] [GO:0072049 "comma-shaped body
morphogenesis" evidence=IMP] [GO:0072050 "S-shaped body
morphogenesis" evidence=IMP] [GO:0072077 "renal vesicle
morphogenesis" evidence=IMP] [GO:0072178 "nephric duct
morphogenesis" evidence=IMP] [GO:0090009 "primitive streak
formation" evidence=IMP] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IMP]
[GO:2000543 "positive regulation of gastrulation" evidence=IMP]
[GO:2000744 "positive regulation of anterior head development"
evidence=IMP] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
MGI:MGI:99783 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0044344
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0021517
GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GO:GO:0072049 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG
GO:GO:0060067 GO:GO:0035852 GO:GO:0072177 GO:GO:0072278
GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846
GO:GO:0035847 EMBL:Z27410 EMBL:S68107 EMBL:AF039706 EMBL:AF039705
IPI:IPI00119516 PIR:I48637 RefSeq:NP_032524.1 UniGene:Mm.4965
ProteinModelPortal:P63006 SMR:P63006 STRING:P63006 PRIDE:P63006
Ensembl:ENSMUST00000018842 GeneID:16869 KEGG:mmu:16869
InParanoid:P63006 NextBio:290830 Bgee:P63006 CleanEx:MM_LHX1
Genevestigator:P63006 GermOnline:ENSMUSG00000018698 Uniprot:P63006
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>RGD|71074 [details] [associations]
symbol:Lhx1 "LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;ISS] [GO:0001655 "urogenital system development"
evidence=ISO;ISS] [GO:0001657 "ureteric bud development"
evidence=ISO;ISS] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISO;ISS] [GO:0001705 "ectoderm formation"
evidence=ISO;ISS] [GO:0001706 "endoderm formation" evidence=ISO;ISS]
[GO:0001764 "neuron migration" evidence=ISO;ISS] [GO:0001822 "kidney
development" evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0007267 "cell-cell signaling"
evidence=ISO;ISS] [GO:0007389 "pattern specification process"
evidence=ISO;ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISO;ISS]
[GO:0009791 "post-embryonic development" evidence=ISO;ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISO;ISS]
[GO:0009948 "anterior/posterior axis specification"
evidence=ISO;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO;ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO;ISS] [GO:0010468 "regulation of gene
expression" evidence=ISO;ISS] [GO:0010842 "retina layer formation"
evidence=ISO;ISS] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISO;ISS] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=ISO;ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISO;ISS] [GO:0021871 "forebrain
regionalization" evidence=ISO;ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=ISO;ISS]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA;ISO] [GO:0035502 "metanephric part of ureteric bud
development" evidence=IEP] [GO:0035846 "oviduct epithelium
development" evidence=ISO;ISS] [GO:0035847 "uterine epithelium
development" evidence=ISO;ISS] [GO:0035849 "nephric duct elongation"
evidence=IEA;ISO] [GO:0035852 "horizontal cell localization"
evidence=IEA;ISO] [GO:0040019 "positive regulation of embryonic
development" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IEP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=ISO;ISS] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISO;ISS] [GO:0048793
"pronephros development" evidence=IEA] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISO;ISS] [GO:0060065
"uterus development" evidence=ISO;ISS] [GO:0060066 "oviduct
development" evidence=ISO;ISS] [GO:0060067 "cervix development"
evidence=ISO;ISS] [GO:0060068 "vagina development" evidence=ISO;ISS]
[GO:0060322 "head development" evidence=ISO;ISS] [GO:0060429
"epithelium development" evidence=ISO;ISS] [GO:0061205
"paramesonephric duct development" evidence=ISO;ISS] [GO:0072001
"renal system development" evidence=ISO] [GO:0072049 "comma-shaped
body morphogenesis" evidence=ISO;ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISO;ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISO;ISS] [GO:0072164 "mesonephric tubule
development" evidence=IEP] [GO:0072177 "mesonephric duct
development" evidence=IEP] [GO:0072178 "nephric duct morphogenesis"
evidence=ISO;ISS] [GO:0072224 "metanephric glomerulus development"
evidence=IEP] [GO:0072278 "metanephric comma-shaped body
morphogenesis" evidence=IEP] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEP] [GO:0090009 "primitive streak
formation" evidence=ISO;ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISO;ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISO;ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISO;ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71074 GO:GO:0005634 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0090009 GO:GO:0060059
GO:GO:0035502 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GeneTree:ENSGT00700000104177 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:S71523
IPI:IPI00199573 RefSeq:NP_665887.3 UniGene:Rn.127825
ProteinModelPortal:P63007 SMR:P63007 STRING:P63007
PhosphoSite:P63007 PRIDE:P63007 Ensembl:ENSRNOT00000003799
GeneID:257634 KEGG:rno:257634 InParanoid:P63007 NextBio:624166
Genevestigator:P63007 GermOnline:ENSRNOG00000002812 Uniprot:P63007
Length = 406
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY ++
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSS 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 VAKENSLHSATTGSDPSLSP 143
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>ZFIN|ZDB-GENE-091118-109 [details] [associations]
symbol:lhx2a "LIM homeobox 2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-091118-109 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:BX470252 IPI:IPI00994306 Ensembl:ENSDART00000134360
ArrayExpress:E9QBI8 Bgee:E9QBI8 Uniprot:E9QBI8
Length = 328
Score = 315 (115.9 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 57/118 (48%), Positives = 79/118 (66%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFF-KR 127
P C GCG LI DRF L ER WH RCLKC C L + CF+++G ++CKED++ +R
Sbjct: 11 PVCAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCKEDYYSRR 70
Query: 128 FGT-KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
F + +CA C +GI T++V RA+DLVYHL+CF+C C + L TGD Y M++ + C+
Sbjct: 71 FSSQRCARCHLGISATEIVMRARDLVYHLSCFSCATCHKVLLTGDH-YGMKETSVYCR 127
Score = 118 (46.6 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKP-ARHVREQLSQDTGLDMRVVQVWFQNRRAKEK 260
Q +KR RT+ QL +++ + + P A+ ++E L+Q TGL RV+QVWFQN RAK +
Sbjct: 198 QKSKRMRTSFKHHQLRSMQSFFTHNHNPDAKDLKE-LAQKTGLTKRVLQVWFQNARAKFR 256
Query: 261 R 261
R
Sbjct: 257 R 257
>UNIPROTKB|P53411 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS;NAS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009948 "anterior/posterior axis specification" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0072049 "comma-shaped body morphogenesis" evidence=ISS]
[GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0021517 "ventral spinal cord development"
evidence=IEP] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0060429 "epithelium
development" evidence=ISS] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEP] [GO:0008045 "motor neuron axon
guidance" evidence=IDA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0010468 "regulation
of gene expression" evidence=ISS] [GO:0021527 "spinal cord
association neuron differentiation" evidence=ISS] [GO:0072179
"nephric duct formation" evidence=NAS] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=NAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021522 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 EMBL:L35569
IPI:IPI00581331 PIR:I50375 RefSeq:NP_990744.1 UniGene:Gga.789
ProteinModelPortal:P53411 SMR:P53411 STRING:P53411 GeneID:396381
KEGG:gga:396381 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 InParanoid:P53411 KO:K09372 OrthoDB:EOG405S1F
NextBio:20816423 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 Uniprot:P53411
Length = 406
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 72/140 (51%), Positives = 96/140 (68%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY +
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNNSN 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 TAKENSLHSATTGSDPSLSP 143
Score = 245 (91.3 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKAKD---GNCLDGDQP--NKR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A D G+ + DQ KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKETGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 254
>UNIPROTKB|F1NX79 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000543 "positive regulation of gastrulation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001706 "endoderm formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021871 "forebrain
regionalization" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0035852 "horizontal cell localization" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0060067 "cervix development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060322 "head development" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0006366
GO:GO:0090190 GO:GO:0040019 GO:GO:2000768 GO:GO:2000543
GeneTree:ENSGT00700000104177 IPI:IPI00581331 GO:GO:0021937
GO:GO:2000744 OMA:PSEMNEG EMBL:AADN02025742 EMBL:AADN02025743
EMBL:AADN02025744 Ensembl:ENSGALT00000008686 Uniprot:F1NX79
Length = 406
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 72/140 (51%), Positives = 96/140 (68%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC ILDRF+L VL+R WH +C++C EC L EKCF+R G L+CK DFF+ FGTKC
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 63
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY--EAA 190
AGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY +
Sbjct: 64 AGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNNSN 123
Query: 191 KAKDGN---CLDGDQPNKRP 207
AK+ + G P+ P
Sbjct: 124 TAKENSLHSATTGSDPSLSP 143
Score = 241 (89.9 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 55/99 (55%), Positives = 70/99 (70%)
Query: 186 DYEAAKAKD---GNCLDGDQP--NKR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A D G+ + DQ KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 155 DSESANVSDKETGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 214
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFR 276
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FR
Sbjct: 215 QETGLNMRVIQVWFQNRRSKERRMKQLSALDARRHAFFR 253
>UNIPROTKB|E1B8I6 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0021877 "forebrain neuron fate
commitment" evidence=IEA] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021799 "cerebral cortex
radially oriented cell migration" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021884 GO:GO:0021877 GO:GO:0021853 GO:GO:0021800
GeneTree:ENSGT00700000104050 GO:GO:0048469 GO:GO:0021799 CTD:26468
KO:K09375 OMA:PATDQVM EMBL:DAAA02032024 EMBL:DAAA02032025
IPI:IPI00716181 RefSeq:NP_001179777.1 UniGene:Bt.32055
Ensembl:ENSBTAT00000007266 GeneID:541261 KEGG:bta:541261
NextBio:20879100 Uniprot:E1B8I6
Length = 392
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 91/216 (42%), Positives = 127/216 (58%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKE 122
+P A C CG ILDR++LKV WH RCL+C C L ++ C+ +N +FCK
Sbjct: 91 VPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKM 150
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
D+F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++
Sbjct: 151 DYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVL 209
Query: 183 CKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAYNT 225
C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 210 CRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 269
Query: 226 SPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
P ++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 270 DNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK 305
>UNIPROTKB|Q9UPM6 [details] [associations]
symbol:LHX6 "LIM/homeobox protein Lhx6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0021877 "forebrain
neuron fate commitment" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0021799 "cerebral cortex radially
oriented cell migration" evidence=ISS] [GO:0021800 "cerebral cortex
tangential migration" evidence=ISS] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=ISS] [GO:0048469 "cell
maturation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 EMBL:CH471090
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021884 GO:GO:0021877 GO:GO:0021853
GO:GO:0021800 eggNOG:NOG264882 GO:GO:0048469 GO:GO:0021799
EMBL:AB031041 EMBL:AB031042 EMBL:AK126982 EMBL:AK289827
EMBL:AK297175 EMBL:AK299709 EMBL:AK313808 EMBL:AL162424
EMBL:AL136570 EMBL:BC103936 EMBL:BC103937 IPI:IPI00294419
IPI:IPI00513787 IPI:IPI00852614 IPI:IPI00853518 PIR:T46907
RefSeq:NP_001229262.1 RefSeq:NP_001229263.1 RefSeq:NP_001229264.1
RefSeq:NP_055183.2 RefSeq:NP_954629.2 UniGene:Hs.103137
ProteinModelPortal:Q9UPM6 SMR:Q9UPM6 STRING:Q9UPM6 DMDM:90185239
PRIDE:Q9UPM6 DNASU:26468 Ensembl:ENST00000340587
Ensembl:ENST00000373754 Ensembl:ENST00000373755
Ensembl:ENST00000394319 Ensembl:ENST00000541397
Ensembl:ENST00000559895 GeneID:26468 KEGG:hsa:26468 UCSC:uc004blx.4
UCSC:uc004bly.4 UCSC:uc010mvw.3 CTD:26468 GeneCards:GC09M124964
HGNC:HGNC:21735 HPA:HPA047854 MIM:608215 neXtProt:NX_Q9UPM6
PharmGKB:PA134949308 HOGENOM:HOG000038965 HOVERGEN:HBG006261
InParanoid:Q9UPM6 KO:K09375 OMA:PATDQVM OrthoDB:EOG4GTKD8
PhylomeDB:Q9UPM6 GenomeRNAi:26468 NextBio:48705 ArrayExpress:Q9UPM6
Bgee:Q9UPM6 CleanEx:HS_LHX6 Genevestigator:Q9UPM6
GermOnline:ENSG00000106852 Uniprot:Q9UPM6
Length = 363
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 91/216 (42%), Positives = 127/216 (58%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKE 122
+P A C CG ILDR++LKV WH RCL+C C L ++ C+ +N +FCK
Sbjct: 62 VPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKM 121
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
D+F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++
Sbjct: 122 DYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVL 180
Query: 183 CKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAYNT 225
C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 181 CRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 240
Query: 226 SPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
P ++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 241 DNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK 276
>UNIPROTKB|A2PZF9 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:8410
"Glandirana rugosa" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HOVERGEN:HBG006262 EMBL:AB269882
EMBL:AB269883 EMBL:AB269884 EMBL:AB269885 EMBL:AB269886
ProteinModelPortal:A2PZF9 SMR:A2PZF9 Uniprot:A2PZF9
Length = 379
Score = 305 (112.4 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 58/158 (36%), Positives = 86/158 (54%)
Query: 27 GICASKLHDLLHEAHAGXXXXXXXXXNDVDYEGIMPVYMPIASIPK---CGGCGDLILDR 83
GI + ++ E + G MP S K C GCG I DR
Sbjct: 5 GITGGHIQGIMEEMERRSKSADNRLAKTIQVNG-RETRMPPLSPEKPTLCAGCGGKISDR 63
Query: 84 FILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT-KCAGCEMGIP 140
+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF +CA C +GI
Sbjct: 64 YYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSVQRCARCHLGIS 123
Query: 141 PTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMED 178
+++V RA++ VYHL+CF C C + L+TGD F + E+
Sbjct: 124 ASEIVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKEN 161
Score = 125 (49.1 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 247 QKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 306
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 307 NLLRQENG 314
>WB|WBGene00002988 [details] [associations]
symbol:lim-6 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030421 "defecation"
evidence=IMP] [GO:0060756 "foraging behavior" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009449 "gamma-aminobutyric acid
biosynthetic process" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0061038 "uterus morphogenesis"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007409 GO:GO:0010468 GO:GO:0030421
GeneTree:ENSGT00700000104050 GO:GO:0009449 eggNOG:NOG243427
GO:GO:0061038 EMBL:FO080324 GeneID:180459 KEGG:cel:CELE_K03E6.1
CTD:180459 GO:GO:0060756 RefSeq:NP_001256980.1
ProteinModelPortal:Q21192 SMR:Q21192 PaxDb:Q21192
EnsemblMetazoa:K03E6.1b UCSC:K03E6.1 WormBase:K03E6.1b
HOGENOM:HOG000018451 InParanoid:Q21192 OMA:HGNIYCE NextBio:909480
ArrayExpress:Q21192 Uniprot:Q21192
Length = 316
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 85/209 (40%), Positives = 126/209 (60%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLA--EKCFARNGLLFCKEDFFKRFGT 130
C GCG LI DR+I +V+E ++H CL+C C L+ +KCF+R+G ++C+ D +G
Sbjct: 42 CSGCGCLIKDRYIYRVMEDSYHESCLRCSCCQLSLSSFKKCFSRHGNIYCEHDHQMLYGK 101
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C C + PT +V R + YH CF+C C R N GDE+++ D ++ C+ DY++
Sbjct: 102 RCRRCMTLLLPTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEYHVF-DGEVFCRNDYQSI 160
Query: 191 ----KAKDGNCLDGD--------QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
+ + L + + KRPRT + A+Q K A+ S KP+R VREQL+
Sbjct: 161 CNFQTISNPDPLMEEVVRSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLA 220
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRL-KKDA 266
+TGL +RVVQVWFQN+RAK K+L KKD+
Sbjct: 221 NETGLSVRVVQVWFQNQRAKIKKLNKKDS 249
>ZFIN|ZDB-GENE-041025-1 [details] [associations]
symbol:lhx6 "LIM homeobox 6" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-041025-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 CTD:26468 HOGENOM:HOG000038965
HOVERGEN:HBG006261 KO:K09375 OMA:PATDQVM OrthoDB:EOG4GTKD8
EMBL:BX571668 EMBL:BC162225 EMBL:AY664403 IPI:IPI00495496
RefSeq:NP_001004015.1 UniGene:Dr.33994 STRING:Q6BDC4
Ensembl:ENSDART00000021100 GeneID:445565 KEGG:dre:445565
InParanoid:Q6BDC4 NextBio:20832189 Uniprot:Q6BDC4
Length = 375
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 89/208 (42%), Positives = 123/208 (59%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG ILDR++LKV WH RCL+C C L + C+ +N +FCK D+F RFGT
Sbjct: 97 CASCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYFSRFGT 156
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE-- 188
KCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 157 KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVLCRIHYDTM 215
Query: 189 ------AAKAKDGNCLDG----DQ-----PNKRPRTTITAKQLETLKMAYNTSPKPARHV 233
AA++ G L+G +Q P KR RT+ TA+QL+ ++ + P
Sbjct: 216 VENLKRAAESGSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQT 275
Query: 234 REQLSQDTGLDMRVVQVWFQNRRAKEKR 261
++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 276 LQKLADMTGLSRRVIQVWFQNCRARHKK 303
>RGD|1306174 [details] [associations]
symbol:Lhx6 "LIM homeobox 6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021799 "cerebral
cortex radially oriented cell migration" evidence=ISO] [GO:0021800
"cerebral cortex tangential migration" evidence=ISO] [GO:0021853
"cerebral cortex GABAergic interneuron migration" evidence=ISO]
[GO:0021877 "forebrain neuron fate commitment" evidence=ISO]
[GO:0021884 "forebrain neuron development" evidence=ISO]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048469 "cell maturation" evidence=ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:1306174 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
IPI:IPI00948544 Ensembl:ENSRNOT00000068564 UCSC:RGD:1306174
Uniprot:D4A2X8
Length = 389
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 90/216 (41%), Positives = 127/216 (58%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKE 122
+P A C CG ILDR++LKV WH RCL+C C L ++ C+ +N ++CK
Sbjct: 88 VPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKM 147
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
D+F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++
Sbjct: 148 DYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVL 206
Query: 183 CKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAYNT 225
C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 207 CRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 266
Query: 226 SPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
P ++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 267 DNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK 302
>UNIPROTKB|E2RA99 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:26468 KO:K09375 OMA:PATDQVM
EMBL:AAEX03006908 EMBL:AAEX03006909 RefSeq:XP_548475.3
Ensembl:ENSCAFT00000032295 GeneID:491354 KEGG:cfa:491354
Uniprot:E2RA99
Length = 363
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 91/216 (42%), Positives = 126/216 (58%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKE 122
+P A C CG ILDR +LKV WH RCL+C C L ++ C+ +N +FCK
Sbjct: 62 VPSAGKNICASCGLEILDRDLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKM 121
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
D+F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++
Sbjct: 122 DYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVL 180
Query: 183 CKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAYNT 225
C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 181 CRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 240
Query: 226 SPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
P ++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 241 DNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK 276
>UNIPROTKB|J9P8Y1 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AAEX03006908 EMBL:AAEX03006909
Ensembl:ENSCAFT00000045524 Uniprot:J9P8Y1
Length = 353
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 91/216 (42%), Positives = 126/216 (58%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKE 122
+P A C CG ILDR +LKV WH RCL+C C L ++ C+ +N +FCK
Sbjct: 91 VPSAGKNICASCGLEILDRDLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKM 150
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
D+F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++
Sbjct: 151 DYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVL 209
Query: 183 CKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAYNT 225
C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 210 CRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 269
Query: 226 SPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
P ++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 270 DNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK 305
>FB|FBgn0003896 [details] [associations]
symbol:tup "tailup" species:7227 "Drosophila melanogaster"
[GO:0008293 "torso signaling pathway" evidence=IGI] [GO:0007362
"terminal region determination" evidence=IGI] [GO:0007390
"germ-band shortening" evidence=IMP] [GO:0008258 "head involution"
evidence=NAS] [GO:0046665 "amnioserosa maintenance" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IMP] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IPI] [GO:0007391 "dorsal
closure" evidence=IMP] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0070983 "dendrite
guidance" evidence=IMP] [GO:0035310 "notum cell fate specification"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007507 "heart
development" evidence=IMP] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IDA] [GO:0048542
"lymph gland development" evidence=IMP] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0022416 "chaeta development"
evidence=IMP] [GO:0007521 "muscle cell fate determination"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007507 GO:GO:0046872
GO:GO:0007391 GO:GO:0008293 GO:GO:0008270 GO:GO:0045944
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000980
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0043433 GO:GO:0048542
GO:GO:0035310 GO:GO:0008407 eggNOG:NOG264882 GO:GO:0007362
GO:GO:0070983 GO:GO:0008258 GO:GO:0007390 GO:GO:0007521 HSSP:P50480
GO:GO:0046665 EMBL:U89385 ProteinModelPortal:P92031 SMR:P92031
STRING:P92031 PRIDE:P92031 FlyBase:FBgn0003896 InParanoid:P92031
OrthoDB:EOG45DV52 ArrayExpress:P92031 Bgee:P92031 Uniprot:P92031
Length = 534
Score = 285 (105.4 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 55/129 (42%), Positives = 72/129 (55%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ + FG
Sbjct: 54 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVRLFG 113
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
TKC C V RA+ ++H+ CF C CARQL GDEF L + L CK D++
Sbjct: 114 TKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKEDHDV 173
Query: 190 AKAKDGNCL 198
+ + L
Sbjct: 174 LEKSSQSSL 182
Score = 151 (58.2 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 199 DGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAK 258
DG +P R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K
Sbjct: 238 DG-KPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCK 295
Query: 259 EKR 261
+K+
Sbjct: 296 DKK 298
>FB|FBgn0000099 [details] [associations]
symbol:ap "apterous" species:7227 "Drosophila melanogaster"
[GO:0007559 "histolysis" evidence=IMP] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0007472 "wing disc
morphogenesis" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;NAS] [GO:0007481 "haltere disc morphogenesis"
evidence=NAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP;TAS]
[GO:0007517 "muscle organ development" evidence=IMP;TAS]
[GO:0007479 "leg disc proximal/distal pattern formation"
evidence=IMP] [GO:0045165 "cell fate commitment" evidence=NAS]
[GO:0048190 "wing disc dorsal/ventral pattern formation"
evidence=IGI;IMP;TAS] [GO:0007451 "dorsal/ventral lineage
restriction, imaginal disc" evidence=TAS] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=TAS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=TAS]
[GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP]
[GO:0035218 "leg disc development" evidence=IMP] [GO:0007526
"larval somatic muscle development" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0007411 GO:GO:0048190
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0007526 GO:GO:0007476 EMBL:X65158 EMBL:M92841
EMBL:AY069815 EMBL:BT005201 PIR:JH0718 RefSeq:NP_001163058.1
RefSeq:NP_001163059.1 RefSeq:NP_523621.2 RefSeq:NP_724428.1
UniGene:Dm.4746 ProteinModelPortal:P29673 SMR:P29673 DIP:DIP-23617N
IntAct:P29673 MINT:MINT-338208 STRING:P29673 PaxDb:P29673
PRIDE:P29673 EnsemblMetazoa:FBtr0086058 GeneID:35509
KEGG:dme:Dmel_CG8376 UCSC:CG8376-RA CTD:11763 FlyBase:FBgn0000099
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 InParanoid:P29673
KO:K09373 OMA:THYSIAR OrthoDB:EOG46Q57V PhylomeDB:P29673 ChiTaRS:ap
GenomeRNAi:35509 NextBio:793761 Bgee:P29673 GermOnline:CG8376
GO:GO:0000977 GO:GO:0045165 GO:GO:0007451 GO:GO:0007559
GO:GO:0036011 GO:GO:0007479 Uniprot:P29673
Length = 469
Score = 295 (108.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 50/129 (38%), Positives = 80/129 (62%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFK 126
++ C GCG I DRF L +E+ WHA CL+C+ C PL + C++R+G ++CK D++
Sbjct: 144 NLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYS 203
Query: 127 RFGTK-CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKP 185
FGT+ C+ C I ++V RA++LV+H+NCF C +C L GD++ ++ D + C+
Sbjct: 204 FFGTRRCSRCLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGII-DALIYCRT 262
Query: 186 DYEAAKAKD 194
Y A+ D
Sbjct: 263 HYSIAREGD 271
Score = 134 (52.2 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 195 GNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQN 254
G+ L KR RT+ QL T+K + + P +QLSQ TGL RV+QVWFQN
Sbjct: 358 GSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQN 417
Query: 255 RRAKEKRL--KKD 265
RAK +R+ K+D
Sbjct: 418 ARAKWRRMMMKQD 430
>ZFIN|ZDB-GENE-060531-41 [details] [associations]
symbol:si:ch211-236k19.2 "si:ch211-236k19.2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-060531-41
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:BX255921 IPI:IPI01006880
Ensembl:ENSDART00000073963 OMA:ANDWIRR Uniprot:F6P152
Length = 255
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 85/207 (41%), Positives = 120/207 (57%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GC I DR++LKV TWH RCL+C C L + CF RN +FC+ D+ FG
Sbjct: 2 CTGCSTEIFDRYVLKVNGLTWHLRCLQCSVCAVSLGHQNSCFIRNKEIFCRTDYNSTFGI 61
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
KCA C + +RRA + +YHL CFAC C RQL+TG+EF LME++ L C+ Y+
Sbjct: 62 KCARCGHQVSANDWIRRAGNDIYHLACFACFFCKRQLSTGEEFGLMENQVL-CRVHYDIT 120
Query: 191 K------AKDGNC--LDGDQP-------NKRPRTTITAKQLETLKMAYNTSPKPARHVRE 235
+ +GN LDG P +KRPRT+ T++Q++ ++ + P +
Sbjct: 121 LLNLQQLSDNGNLIHLDGALPIQYLPKASKRPRTSFTSEQIQIMQTHFIRDKNPDAATLQ 180
Query: 236 QLSQDTGLDMRVVQVWFQNRRAKEKRL 262
+L+ TGL RV+QVWFQN RA++KR+
Sbjct: 181 RLADTTGLSRRVIQVWFQNCRARQKRI 207
>UNIPROTKB|P53410 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671 EMBL:L35568
IPI:IPI00574086 PIR:I50370 UniGene:Gga.790
ProteinModelPortal:P53410 SMR:P53410 Uniprot:P53410
Length = 319
Score = 275 (101.9 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 52/107 (48%), Positives = 66/107 (61%)
Query: 84 FILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFGTKCAGCEMGIP 140
F+L+V + WH CLKC ECG PL E C F R+G +CK D+ + FG KCA C
Sbjct: 1 FLLRVSPDLEWHVACLKCAECGQPLDETCTCFLRDGKAYCKRDYGRLFGIKCAQCRAAFS 60
Query: 141 PTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
+ +V RA+D VYHL CF C C RQL GD+F L E R L+C+ D+
Sbjct: 61 SSDLVMRARDHVYHLECFRCAACGRQLLPGDQFCLRE-RDLLCRADH 106
Score = 147 (56.8 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 152 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 207
>ZFIN|ZDB-GENE-040624-1 [details] [associations]
symbol:isl1l "islet1, like" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-040624-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671
HOGENOM:HOG000236304 eggNOG:NOG295777 EMBL:AY423019 IPI:IPI00495237
RefSeq:NP_001002043.1 UniGene:Dr.156646 ProteinModelPortal:Q6TEN0
SMR:Q6TEN0 GeneID:415131 KEGG:dre:415131 CTD:415131
NextBio:20818810 Uniprot:Q6TEN0
Length = 323
Score = 265 (98.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 55/149 (36%), Positives = 85/149 (57%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG ILDRFI++V + WHARCLKC EC L E C F R+G FC+E + +
Sbjct: 19 CVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHYSRLST 78
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-E 188
+KCA C+ + V R+Q +YH+ CF C C R L +GDE Y+++D +L+C + +
Sbjct: 79 SKCAKCDKAFISKEFVMRSQVNIYHVQCFRCEGCNRPLLSGDE-YVLQDGQLLCTDHHNK 137
Query: 189 AAKAKDGNCLDGDQPNKRPRTTITAKQLE 217
A + P++ ++T++ ++
Sbjct: 138 LMSASINQQKEAGDPSEEIKSTLSWSSMQ 166
Score = 133 (51.9 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 206 RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
R RT ++ QL L+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 174 RVRTVLSETQLCMLQTCYTANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 229
>WB|WBGene00002987 [details] [associations]
symbol:lim-4 species:6239 "Caenorhabditis elegans"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0005623
GeneTree:ENSGT00700000104050 EMBL:FO081410 HSSP:P50480 EMBL:U72348
PIR:T27637 RefSeq:NP_508669.1 UniGene:Cel.665
ProteinModelPortal:G5EEA1 SMR:G5EEA1 EnsemblMetazoa:ZC64.4
GeneID:180672 KEGG:cel:CELE_ZC64.4 CTD:180672 WormBase:ZC64.4
OMA:ARQKKWH NextBio:910388 Uniprot:G5EEA1
Length = 355
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 87/234 (37%), Positives = 119/234 (50%)
Query: 66 PIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFF 125
P A I C C I D+F L + R +H CL+C C PL+ KCF ++ +CK +F
Sbjct: 91 PDAVIVICTQCQHQIQDKFFLSIDGRNYHENCLQCSTCENPLSNKCFYKDKTFYCKGCYF 150
Query: 126 K-----------RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFY 174
+ G KCA C+ I T VRRA++ VYHL CF+C C RQL+TG+E Y
Sbjct: 151 RTHVTSTASSCRELGPKCASCDRTIQATDWVRRARNYVYHLACFSCNQCKRQLSTGEE-Y 209
Query: 175 LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVR 234
+++ L+CK + D KR RTT QL L+ +N P
Sbjct: 210 ALQEGNLLCKQHFLELVEGDSGVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADL 269
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRL-KKDAGRTRWSQYFRSMKGGTSPKDE 287
E+++ TGL RV QVWFQN RA++K+ +K G SQ RS G +SP +
Sbjct: 270 EKIASMTGLSKRVTQVWFQNSRARQKKWHQKSEGDNGDSQ--RSSVGPSSPSQK 321
>UNIPROTKB|F1SLQ9 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0021877 "forebrain neuron fate
commitment" evidence=IEA] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021799 "cerebral cortex
radially oriented cell migration" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021884 GO:GO:0021877 GO:GO:0021853
GO:GO:0021800 GeneTree:ENSGT00700000104050 GO:GO:0048469
GO:GO:0021799 OMA:PATDQVM EMBL:CU041257 Ensembl:ENSSSCT00000006081
Uniprot:F1SLQ9
Length = 362
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 85/216 (39%), Positives = 123/216 (56%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKE 122
+P A C CG ILDR++LKV WH RCL+C C L ++ C+ +N +FCK
Sbjct: 81 VPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKM 140
Query: 123 DFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
D+F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K++
Sbjct: 141 DYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-KVL 199
Query: 183 CKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAYNT 225
C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 200 CRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQ 259
Query: 226 SPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
P ++ TGL RV+Q++ + + K+KR
Sbjct: 260 VNNPDAQTLQKADM-TGLSRRVLQLYIKCKSKKKKR 294
>UNIPROTKB|Q68EY3 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:8355
"Xenopus laevis" [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
KO:K09373 HOVERGEN:HBG006262 HSSP:P61969 EMBL:BC080067
RefSeq:NP_001087527.1 UniGene:Xl.28959 ProteinModelPortal:Q68EY3
SMR:Q68EY3 GeneID:447351 KEGG:xla:447351 CTD:447351
Xenbase:XB-GENE-866119 Uniprot:Q68EY3
Length = 331
Score = 299 (110.3 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 53/119 (44%), Positives = 79/119 (66%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED++ RF
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYY-RFSV 131
Query: 131 K-CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
K CA C +GI +++V RA++ VYHL+CF C C + L+TGD+F M++ + C+ +E
Sbjct: 132 KRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDQFG-MKENLVYCRIHFE 189
Score = 77 (32.2 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
Q KR RT+ QL T+K + + P +QL+Q TGL RV+Q
Sbjct: 266 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 313
>WB|WBGene00002989 [details] [associations]
symbol:lim-7 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0060323 "head morphogenesis"
evidence=IMP] [GO:0007588 "excretion" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] [GO:0060465 "pharynx development"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0002119 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0040011 GO:GO:0007588
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060465 GeneTree:ENSGT00700000104050 GO:GO:0035262
GO:GO:0060323 KO:K09370 HSSP:P50480 EMBL:U73946 EMBL:FO080336
PIR:T33049 RefSeq:NP_491668.1 UniGene:Cel.18382
ProteinModelPortal:G5EC36 SMR:G5EC36 IntAct:G5EC36
EnsemblMetazoa:C04F1.3 GeneID:172236 KEGG:cel:CELE_C04F1.3
CTD:172236 WormBase:C04F1.3 OMA:DEWDEER NextBio:874619
Uniprot:G5EC36
Length = 452
Score = 252 (93.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 49/118 (41%), Positives = 71/118 (60%)
Query: 73 CGGCGDLILDRFILKVLERT-WHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFG 129
C GC I DR+ L+V +HA+CLKC +C PL E F +NG +C++D+ + F
Sbjct: 56 CAGCRLEISDRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKNGQTYCRDDYRRLFT 115
Query: 130 TKCAGCEMGIPPTQVVRRA-QDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
T+C+ C T +V RA V+HLNCFACV C ++L TG+EF + ++ L C+ D
Sbjct: 116 TRCSRCHGDFDKTDLVMRAGPQNVFHLNCFACVACEKRLQTGEEFQI-KNNSLYCRSD 172
Score = 130 (50.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 201 DQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEK 260
D+ R RT + QL+ L+ Y+ + +P ++E+L + TGL RV++VWFQN+R K+K
Sbjct: 262 DKQATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQNKRCKDK 321
Query: 261 R 261
+
Sbjct: 322 K 322
>UNIPROTKB|F1NLU0 [details] [associations]
symbol:F1NLU0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021799
"cerebral cortex radially oriented cell migration" evidence=IEA]
[GO:0021800 "cerebral cortex tangential migration" evidence=IEA]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IEA] [GO:0021877 "forebrain neuron fate commitment"
evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 OMA:PATDQVM
EMBL:AADN02026365 EMBL:AADN02026363 EMBL:AADN02026364
IPI:IPI00603083 Ensembl:ENSGALT00000002057 Uniprot:F1NLU0
Length = 354
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 88/220 (40%), Positives = 120/220 (54%)
Query: 66 PIASIPKCGGCGDLILDRFILKVLERTWHA--RC-----LKCHECGAPLAEKCFARNGLL 118
P A C CG ILDR++LK WH+ +C +K GAP E+C R L
Sbjct: 63 PSAGKNVCSSCGLEILDRYLLKSNNCIWHSGLQCFEENQIKTGARGAPSEERCVPRRCSL 122
Query: 119 FCKEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMED 178
F F RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+
Sbjct: 123 FLLVQVFGRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE 182
Query: 179 RKLVCKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKM 221
K++C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++
Sbjct: 183 -KVLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQA 241
Query: 222 AYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+ P ++L+ TGL RV+QVWFQN RA+ K+
Sbjct: 242 QFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKK 281
>UNIPROTKB|F1S229 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CU179728
Ensembl:ENSSSCT00000006937 Uniprot:F1S229
Length = 295
Score = 196 (74.1 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQ 236
+D + +CK + A K + D +P KRPRT +T +Q K ++ S KP R VRE
Sbjct: 82 DDEESLCKSAHGAGKGAPEDGKDHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVRET 140
Query: 237 LSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 141 LAAETGLSVRVVQVWFQNQRAKMKKLAR 168
Score = 180 (68.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 34/61 (55%), Positives = 39/61 (63%)
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
F KC GC I P + V RAQ VYHL+CF C +C RQL GDEF L E + L+CK DY
Sbjct: 3 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQ-LLCKGDY 61
Query: 188 E 188
E
Sbjct: 62 E 62
Score = 87 (35.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KCGGC + I + F+++ + +H C C C L ++ + G L CK D+ K
Sbjct: 6 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 63
>UNIPROTKB|I3L863 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 OMA:GNAGMEG EMBL:CU179728 Ensembl:ENSSSCT00000032564
Uniprot:I3L863
Length = 296
Score = 196 (74.1 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQ 236
+D + +CK + A K + D +P KRPRT +T +Q K ++ S KP R VRE
Sbjct: 82 DDEESLCKSAHGAGKGAPEDGKDHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVRET 140
Query: 237 LSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 141 LAAETGLSVRVVQVWFQNQRAKMKKLAR 168
Score = 180 (68.4 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 34/61 (55%), Positives = 39/61 (63%)
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
F KC GC I P + V RAQ VYHL+CF C +C RQL GDEF L E + L+CK DY
Sbjct: 3 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQ-LLCKGDY 61
Query: 188 E 188
E
Sbjct: 62 E 62
Score = 87 (35.7 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KCGGC + I + F+++ + +H C C C L ++ + G L CK D+ K
Sbjct: 6 KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEK 63
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 62/134 (46%), Positives = 82/134 (61%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GC I DRF+++V E +WH CL+C C PL C+ R L+CK D+ + F TKC
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTTSCYFRERKLYCKYDYQQLFATKC 92
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKA 192
+GC I PT+ V RA + VYHLNCF C +C RQL GDEF L +D +L+CK DYE K
Sbjct: 93 SGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVL-KDGQLLCKSDYEREKD 151
Query: 193 KDGNCLDGDQPNKR 206
G+ D +++
Sbjct: 152 LLGSVSPDDSDSEK 165
Score = 195 (73.7 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 42/90 (46%), Positives = 56/90 (62%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED +L KP+ + G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 167 EDEELDIKPEKGSGGTGKGD--DGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 224
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 225 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 254
>ZFIN|ZDB-GENE-081105-153 [details] [associations]
symbol:lhx8b "LIM homeobox 8b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-081105-153 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 EMBL:CR388090
IPI:IPI00635015 Ensembl:ENSDART00000061776 Uniprot:F1QST6
Length = 295
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 75/197 (38%), Positives = 107/197 (54%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C C + ILDR +LKV + WHARCL C C L+E+ C+ R +FCK +F+RF T
Sbjct: 24 CTRCREHILDRHLLKVNDMCWHARCLSCSVCQTTLSEQTTCYVREREIFCKLHYFRRFQT 83
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE-- 188
C+ C + + V RA+ VYHL CF+C C RQL+TG+EF L+ + KL+C+ Y
Sbjct: 84 WCSCCRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGEEFALVGE-KLLCRIHYSSM 142
Query: 189 -------AAKAKD--------GNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHV 233
A K K C +P+KR RT+ TA QL+ ++ + P +
Sbjct: 143 LDKLNRPAEKGKSVSPEKALAAGCEIKQKPSKRARTSFTADQLQVMQAQFVQDNNPDAQM 202
Query: 234 REQLSQDTGLDMRVVQV 250
+ L++ TGL RV+QV
Sbjct: 203 LQSLAEQTGLSRRVIQV 219
Score = 133 (51.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
KA C +P+KR RT+ TA QL+ ++ + P + + L++ TGL RV+QV
Sbjct: 160 KALAAGCEIKQKPSKRARTSFTADQLQVMQAQFVQDNNPDAQMLQSLAEQTGLSRRVIQV 219
Query: 251 -WFQNRRAKEKR 261
WFQN RA+ K+
Sbjct: 220 VWFQNCRARHKK 231
>UNIPROTKB|E1BBB7 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0007611 Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884
GeneTree:ENSGT00700000104050 OMA:MYWKSDQ EMBL:DAAA02008298
IPI:IPI00713787 Ensembl:ENSBTAT00000025544 Uniprot:E1BBB7
Length = 371
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 75/204 (36%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 96 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 155
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 156 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHYDCM 214
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D L +V+Q
Sbjct: 215 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTADQ-LQKQVMQA 265
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 266 QFAQDNNPDAQTLQKLAERTGLSR 289
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 202 QPNKRPRTTITAKQLE--TLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 259
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+
Sbjct: 244 KPAKRARTSFTADQLQKQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARH 303
Query: 260 KR 261
K+
Sbjct: 304 KK 305
>UNIPROTKB|H0YM35 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007498 "mesoderm development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0007411 GO:GO:0007498 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 Gene3D:2.10.110.10
GO:GO:0001843 GO:GO:0009953 GO:GO:0021978 GO:GO:0000988
EMBL:AC006450 GO:GO:2000678 HGNC:HGNC:6594 ChiTaRS:LHX2
EMBL:AL158052 Ensembl:ENST00000560961 Bgee:H0YM35 Uniprot:H0YM35
Length = 147
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 56/120 (46%), Positives = 80/120 (66%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CF+++G ++CKED+++RF
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 71
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+DLVYHLNCF C C + L TGD F M+D + C+ +EA
Sbjct: 72 QRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDSLVYCRLHFEA 130
>UNIPROTKB|E2REU0 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:MYWKSDQ EMBL:AAEX03004901
EMBL:AAEX03004902 Ensembl:ENSCAFT00000032488 Uniprot:E2REU0
Length = 379
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 74/204 (36%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 98 CNSCGREIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 157
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 158 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHYDCM 216
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D ++V+Q
Sbjct: 217 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 265
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 266 QFAQDNNPDAQTLQKLAERTGLSR 289
Score = 132 (51.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 246 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 305
>UNIPROTKB|J9PBA6 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AAEX03004901 EMBL:AAEX03004902
Ensembl:ENSCAFT00000043981 Uniprot:J9PBA6
Length = 295
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 74/204 (36%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 14 CNSCGREIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 73
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 74 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHYDCM 132
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D ++V+Q
Sbjct: 133 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 181
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 182 QFAQDNNPDAQTLQKLAERTGLSR 205
Score = 132 (51.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 162 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 221
>UNIPROTKB|A0JNI8 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 GO:GO:0035262 HOGENOM:HOG000034022
HOVERGEN:HBG006262 EMBL:BT026326 EMBL:BC126704 IPI:IPI00692674
IPI:IPI00839239 UniGene:Bt.31799 ProteinModelPortal:A0JNI8
SMR:A0JNI8 Ensembl:ENSBTAT00000043591 Ensembl:ENSBTAT00000054943
InParanoid:Q0V893 OMA:AAMLFHG Uniprot:A0JNI8
Length = 397
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 131 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 241
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 242 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 294
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 324
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 325 NLLRQENG 332
>UNIPROTKB|Q58CW3 [details] [associations]
symbol:LHX9 "LIM homeobox 9" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
IPI:IPI00692674 UniGene:Bt.31799 CTD:56956 EMBL:DAAA02043909
EMBL:DAAA02043910 EMBL:BT021834 IPI:IPI00903761
RefSeq:NP_001019715.1 SMR:Q58CW3 Ensembl:ENSBTAT00000017945
GeneID:515012 KEGG:bta:515012 InParanoid:Q58CW3 NextBio:20871620
Uniprot:Q58CW3
Length = 378
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 52 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 111
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 112 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 170
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 171 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 222
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 223 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 275
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 305
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 306 NLLRQENG 313
>UNIPROTKB|F1S5F5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 GO:GO:0035262 OMA:AAMLFHG
EMBL:FP325281 Ensembl:ENSSSCT00000011930 Uniprot:F1S5F5
Length = 397
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 131 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 241
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 242 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 294
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 324
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 325 NLLRQENG 332
>UNIPROTKB|E9PGE3 [details] [associations]
symbol:LHX8 "LIM/homeobox protein Lhx8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0021884
"forebrain neuron development" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884 KO:K09375
EMBL:AC099786 RefSeq:NP_001243043.1 UniGene:Hs.403934 GeneID:431707
KEGG:hsa:431707 CTD:431707 HGNC:HGNC:28838 GenomeRNAi:431707
IPI:IPI00480117 ProteinModelPortal:E9PGE3 SMR:E9PGE3
Ensembl:ENST00000356261 ArrayExpress:E9PGE3 Bgee:E9PGE3
Uniprot:E9PGE3
Length = 346
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 74/204 (36%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 65 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 124
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 125 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHYDCM 183
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D ++V+Q
Sbjct: 184 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 232
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 233 QFAQDNNPDAQTLQKLAERTGLSR 256
Score = 132 (51.5 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 213 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 272
>UNIPROTKB|Q68G74 [details] [associations]
symbol:LHX8 "LIM/homeobox protein Lhx8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0021884
"forebrain neuron development" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0007611 Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884
eggNOG:NOG264882 HSSP:P06601 HOGENOM:HOG000038965
HOVERGEN:HBG006261 KO:K09375 EMBL:AC099786 EMBL:BC040321
IPI:IPI00470355 RefSeq:NP_001001933.1 RefSeq:NP_001243043.1
UniGene:Hs.403934 ProteinModelPortal:Q68G74 SMR:Q68G74
STRING:Q68G74 PhosphoSite:Q68G74 DMDM:296434566 PRIDE:Q68G74
DNASU:431707 Ensembl:ENST00000294638 GeneID:431707 KEGG:hsa:431707
UCSC:uc001dgo.3 CTD:431707 GeneCards:GC01P075594 HGNC:HGNC:28838
MIM:604425 neXtProt:NX_Q68G74 PharmGKB:PA142671553
InParanoid:Q68G74 OMA:MYWKSDQ OrthoDB:EOG48WC27 GenomeRNAi:431707
NextBio:108706 ArrayExpress:Q68G74 Bgee:Q68G74 CleanEx:HS_LHX8
Genevestigator:Q68G74 Uniprot:Q68G74
Length = 356
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 74/204 (36%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 75 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 134
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 135 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHYDCM 193
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D ++V+Q
Sbjct: 194 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 242
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 243 QFAQDNNPDAQTLQKLAERTGLSR 266
Score = 132 (51.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 223 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 282
>UNIPROTKB|C8YLT4 [details] [associations]
symbol:Lhx8 "LIM homeobox 8" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0021884 "forebrain
neuron development" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 KO:K09375 CTD:431707 OMA:MYWKSDQ
EMBL:CU929623 EMBL:FJ587986 RefSeq:NP_001159787.1 UniGene:Ssc.78542
Ensembl:ENSSSCT00000004181 GeneID:100310798 KEGG:ssc:100310798
Uniprot:C8YLT4
Length = 295
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 74/204 (36%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 14 CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 73
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 74 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHYDCM 132
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D ++V+Q
Sbjct: 133 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 181
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 182 QFAQDNNPDAQTLQKLAERTGLSR 205
Score = 132 (51.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 162 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 221
>UNIPROTKB|E2R2S5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0008585 GO:GO:0046872
GO:GO:0008283 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262 OMA:AAMLFHG
CTD:56956 EMBL:AAEX03005042 RefSeq:XP_848787.1 SMR:E2R2S5
Ensembl:ENSCAFT00000018021 GeneID:490257 KEGG:cfa:490257
NextBio:20863313 Uniprot:E2R2S5
Length = 397
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 131 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 241
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 242 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 294
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 324
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 325 NLLRQENG 332
>UNIPROTKB|Q9NQ69 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 EMBL:CH471067 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 KO:K09373 GO:GO:0035262 HOVERGEN:HBG006262
OrthoDB:EOG4G4GQK OMA:AAMLFHG CTD:56956 EMBL:AJ277915 EMBL:AJ277916
EMBL:AJ277917 EMBL:AJ277918 EMBL:AJ277919 EMBL:AJ277920
EMBL:AJ296272 EMBL:AY273889 EMBL:AL590115 EMBL:BC131622
IPI:IPI00328729 IPI:IPI00396103 IPI:IPI00642345 IPI:IPI00642361
RefSeq:NP_001014434.1 RefSeq:NP_064589.2 UniGene:Hs.442578
UniGene:Hs.706475 PDB:2DMQ PDBsum:2DMQ ProteinModelPortal:Q9NQ69
SMR:Q9NQ69 STRING:Q9NQ69 PhosphoSite:Q9NQ69 DMDM:224471883
PRIDE:Q9NQ69 Ensembl:ENST00000337020 Ensembl:ENST00000367387
Ensembl:ENST00000367390 Ensembl:ENST00000367391 GeneID:56956
KEGG:hsa:56956 UCSC:uc001gui.1 UCSC:uc001guk.1
GeneCards:GC01P197881 HGNC:HGNC:14222 HPA:HPA009695 MIM:606066
neXtProt:NX_Q9NQ69 PharmGKB:PA30368 PhylomeDB:Q9NQ69
EvolutionaryTrace:Q9NQ69 GenomeRNAi:56956 NextBio:62575
ArrayExpress:Q9NQ69 Bgee:Q9NQ69 CleanEx:HS_LHX9
Genevestigator:Q9NQ69 GermOnline:ENSG00000143355 Uniprot:Q9NQ69
Length = 397
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 131 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 241
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 242 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 294
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 324
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 325 NLLRQENG 332
>MGI|MGI:1316721 [details] [associations]
symbol:Lhx9 "LIM homeobox protein 9" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008584 "male gonad development" evidence=IMP]
[GO:0008585 "female gonad development" evidence=IMP] [GO:0035262
"gonad morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1316721 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
CTD:56956 EMBL:AJ243851 EMBL:AJ243852 EMBL:AJ243853 EMBL:AJ243854
EMBL:AJ243855 EMBL:AJ243856 EMBL:AJ243857 EMBL:AC154398
EMBL:BC072623 EMBL:AF134761 EMBL:AF113518 IPI:IPI00124662
IPI:IPI00227842 IPI:IPI00626920 IPI:IPI00830796
RefSeq:NP_001020736.1 RefSeq:NP_001036042.1 RefSeq:NP_034844.1
UniGene:Mm.250732 ProteinModelPortal:Q9WUH2 SMR:Q9WUH2
IntAct:Q9WUH2 MINT:MINT-1340747 STRING:Q9WUH2 PRIDE:Q9WUH2
Ensembl:ENSMUST00000019374 Ensembl:ENSMUST00000046870
Ensembl:ENSMUST00000093486 Ensembl:ENSMUST00000112026
Ensembl:ENSMUST00000112030 GeneID:16876 KEGG:mmu:16876
UCSC:uc007cvr.1 UCSC:uc007cvs.1 UCSC:uc007cvu.1 ChiTaRS:LHX9
NextBio:290864 Bgee:Q9WUH2 CleanEx:MM_LHX9 Genevestigator:Q9WUH2
GermOnline:ENSMUSG00000019230 Uniprot:Q9WUH2
Length = 397
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 131 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 241
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 242 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 294
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 324
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 325 NLLRQENG 332
>RGD|727956 [details] [associations]
symbol:Lhx9 "LIM homeobox 9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0008584 "male gonad development"
evidence=IEA;ISO] [GO:0008585 "female gonad development"
evidence=IEA;ISO] [GO:0035262 "gonad morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AY273890
RGD:727956 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0008585
GO:GO:0046872 GO:GO:0008283 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584
Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG HSSP:P61969
CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 121
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 122 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 180
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 181 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 232
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 233 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 285
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 315
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 316 NLLRQENG 323
>UNIPROTKB|Q80W90 [details] [associations]
symbol:Lhx9 "LIM/homeobox protein Lhx9" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 EMBL:AY273890 RGD:727956 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
HSSP:P61969 CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 121
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 122 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 180
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 181 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 232
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 233 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 285
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 315
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 316 NLLRQENG 323
>UNIPROTKB|E2R2S6 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:AAEX03005042 SMR:E2R2S6 Ensembl:ENSCAFT00000018020
Uniprot:E2R2S6
Length = 330
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 131 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 241
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 242 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 294
>UNIPROTKB|H0YL54 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:AL590115 HGNC:HGNC:14222
ProteinModelPortal:H0YL54 SMR:H0YL54 Ensembl:ENST00000561173
Bgee:H0YL54 Uniprot:H0YL54
Length = 336
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 77/235 (32%), Positives = 117/235 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 77 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 136
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA+D VYHL+CF C C + L TGD F M+D + C+ +E
Sbjct: 137 QRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFG-MKDSLVYCRAHFET 195
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
L G+ P + T + AK L + Y + R + + L + +V
Sbjct: 196 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDIVN 247
Query: 250 VWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGGTSPKDELKIDLDSNFSHSHGKTA 304
+ L +D SQ + M+ TS K + S F+ +H A
Sbjct: 248 YNSGCNENEADHLDRDQQPYPPSQKTKRMR--TSFKHHQLRTMKSYFAINHNPDA 300
>UNIPROTKB|F1NV70 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008585 "female gonad development" evidence=IEA]
[GO:0035262 "gonad morphogenesis" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:AAMLFHG IPI:IPI00682838
EMBL:AADN02033814 EMBL:AADN02033815 Ensembl:ENSGALT00000003480
ArrayExpress:F1NV70 Uniprot:F1NV70
Length = 378
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 66/178 (37%), Positives = 100/178 (56%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 111
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA++ VYHL+CF C C + L TGD F M+D + C+ +E+
Sbjct: 112 QRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFG-MKDNLVYCRAHFES 170
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAY--NTSPKPARHVREQLSQDTGLDM 245
L G+ P + T + AK L + Y T R++ S G+D+
Sbjct: 171 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDI 220
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR RT+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 305
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 306 NLLRQENG 313
>UNIPROTKB|Q90881 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021522 eggNOG:NOG240987 KO:K09373 HOGENOM:HOG000034022
HOVERGEN:HBG006262 EMBL:L35566 IPI:IPI00682838 PIR:JC5658
RefSeq:NP_990757.1 UniGene:Gga.2348 HSSP:P61969 STRING:Q90881
GeneID:396397 KEGG:gga:396397 CTD:56956 InParanoid:Q90881
NextBio:20816439 Uniprot:Q90881
Length = 397
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 66/178 (37%), Positives = 100/178 (56%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA++ VYHL+CF C C + L TGD F M+D + C+ +E+
Sbjct: 131 QRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFG-MKDNLVYCRAHFES 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAY--NTSPKPARHVREQLSQDTGLDM 245
L G+ P + T + AK L + Y T R++ S G+D+
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDI 239
Score = 122 (48.0 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
Q KR T+ QL T+K + + P +QL+Q TGL RV+QVWFQN RAK +R
Sbjct: 265 QKTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRR 324
Query: 262 --LKKDAG 267
L+++ G
Sbjct: 325 NLLRQENG 332
>UNIPROTKB|E1BSF2 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:AADN02033814 EMBL:AADN02033815 IPI:IPI00685016
Ensembl:ENSGALT00000034098 ArrayExpress:E1BSF2 Uniprot:E1BSF2
Length = 330
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 66/178 (37%), Positives = 100/178 (56%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK--CFARNGLLFCKEDFFKRFGT 130
C GCG I DR+ L +++ WH RCLKC EC L + CFA++G ++CKED+++RF
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 131 -KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+CA C +GI +++V RA++ VYHL+CF C C + L TGD F M+D + C+ +E+
Sbjct: 131 QRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFG-MKDNLVYCRAHFES 189
Query: 190 AKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAY--NTSPKPARHVREQLSQDTGLDM 245
L G+ P + T + AK L + Y T R++ S G+D+
Sbjct: 190 L-------LQGEYPPQLSYTELAAKS-GGLALPYFNGTGTVQKGRPRKRKSPALGVDI 239
>UNIPROTKB|F1P4G9 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:MYWKSDQ EMBL:AADN02012385
IPI:IPI00572692 Ensembl:ENSGALT00000018546 Uniprot:F1P4G9
Length = 347
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 73/204 (35%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 66 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 125
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ Y+
Sbjct: 126 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHYDCM 184
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + ++ + + N PKPA+ R + D ++V+Q
Sbjct: 185 -------LDNLKREVENGNGVSMEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 233
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 234 QFAQDNNPDAQTLQKLAERTGLSR 257
Score = 132 (51.5 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 214 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 273
>UNIPROTKB|E1C2D6 [details] [associations]
symbol:E1C2D6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001558 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
EMBL:AADN02034025 EMBL:AADN02034026 EMBL:AADN02034027
EMBL:AADN02034028 EMBL:AADN02034029 IPI:IPI00590021
Ensembl:ENSGALT00000005411 OMA:XKSDDEE Uniprot:E1C2D6
Length = 386
Score = 195 (73.7 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 43/89 (48%), Positives = 58/89 (65%)
Query: 177 EDRKLVCKPDYEAAK-AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVRE 235
+D VCK +AK A++G D +P KRPRT +T +Q K ++ S KP R VRE
Sbjct: 175 DDEDSVCKMGPASAKGAEEGK--DHKRP-KRPRTILTTQQRRAFKASFEVSSKPCRKVRE 231
Query: 236 QLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 232 TLAAETGLSVRVVQVWFQNQRAKMKKLAR 260
Score = 175 (66.7 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 44/133 (33%), Positives = 65/133 (48%)
Query: 68 ASIPK--CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFF 125
A+ P+ C GC +I DRF+L++ + WH RC++C C PL CF R+ L+CK D+
Sbjct: 28 AATPRSVCEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHTTCFYRDKKLYCKLDYE 87
Query: 126 K---RFGTKCAGCE---MGIP-PTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMED 178
K F K GC IP P YH C C +CA + G ++++
Sbjct: 88 KYVLNFFKKPGGCSEKAAEIPSPAAAFSSVSVSCYH--C--CFVCASEGLRGSNAHVLQM 143
Query: 179 RKLVCKPDYEAAK 191
++ CK + AK
Sbjct: 144 GQIRCKGNPSPAK 156
>WB|WBGene00006654 [details] [associations]
symbol:ttx-3 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008355 "olfactory learning" evidence=IMP] [GO:0043052
"thermotaxis" evidence=IGI;IMP] [GO:0045664 "regulation of neuron
differentiation" evidence=IMP] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0040024 "dauer larval development" evidence=IGI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0040040 "thermosensory behavior"
evidence=IGI;IMP] [GO:0008306 "associative learning" evidence=IMP]
[GO:0022401 "negative adaptation of signaling pathway"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0045664
GO:GO:0008355 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0007409 GO:GO:0040024 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0040040 GO:GO:0043052 HSSP:P06601 GO:GO:0022401 EMBL:Z81482
UniGene:Cel.19674 GeneID:181357 KEGG:cel:CELE_C40H5.5 CTD:181357
EMBL:U72211 PIR:T19871 RefSeq:NP_001257168.1
ProteinModelPortal:G5EE86 SMR:G5EE86 EnsemblMetazoa:C40H5.5a
WormBase:C40H5.5a OMA:CRADHAK NextBio:913598 Uniprot:G5EE86
Length = 409
Score = 214 (80.4 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 41/134 (30%), Positives = 71/134 (52%)
Query: 61 MPVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLL 118
+P P A + +C C I+D+ I V + +H CL+C C P ++KC+ R+G+
Sbjct: 99 IPKIEP-ALLNQCCLCTFAIVDKEISVVDGKYYHNNCLRCQMCDIPFEYSDKCYVRDGVF 157
Query: 119 FCKEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMED 178
C+ D KR+ C CE+ + +V +A+++++H CF C +C +LN GD + +
Sbjct: 158 LCRADHAKRYQKCCRKCEIPLNREDMVMKAKEMIFHHACFVCFICGIKLNPGDYYTMSPQ 217
Query: 179 RKLVCKPDYEAAKA 192
L C Y A ++
Sbjct: 218 GHLYCHAHYNAVRS 231
Score = 142 (55.0 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 188 EAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRV 247
EA+ +DGN G Q +KR RT+ QL +K + + P +QL+ T L RV
Sbjct: 277 EASTDEDGNG-SGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRV 335
Query: 248 VQVWFQNRRAKEKRLKKDAGRT 269
+QVWFQN RAK +R D GR+
Sbjct: 336 LQVWFQNARAKYRRELHDGGRS 357
>MGI|MGI:1096343 [details] [associations]
symbol:Lhx8 "LIM homeobox protein 8" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IMP] [GO:0021879 "forebrain neuron differentiation"
evidence=IMP] [GO:0021884 "forebrain neuron development"
evidence=IGI] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1096343 GO:GO:0005634 GO:GO:0008585
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 EMBL:CH466532 GO:GO:0021884
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOGENOM:HOG000038965
HOVERGEN:HBG006261 KO:K09375 CTD:431707 OMA:MYWKSDQ
OrthoDB:EOG48WC27 EMBL:D49658 EMBL:AB007596 EMBL:AJ000338
EMBL:AK165733 EMBL:BC125281 EMBL:BC125283 EMBL:BC144768
IPI:IPI00132791 RefSeq:NP_034843.2 UniGene:Mm.15530
ProteinModelPortal:O35652 SMR:O35652 STRING:O35652
PhosphoSite:O35652 PRIDE:O35652 Ensembl:ENSMUST00000177846
GeneID:16875 KEGG:mmu:16875 InParanoid:Q3TMT2 NextBio:290860
Bgee:O35652 CleanEx:MM_LHX8 Genevestigator:O35652
GermOnline:ENSMUSG00000028201 Uniprot:O35652
Length = 367
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 73/204 (35%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 96 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 155
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ ++
Sbjct: 156 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHFDCM 214
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D ++V+Q
Sbjct: 215 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 263
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 264 QFAQDNNPDAQTLQKLAERTGLSR 287
Score = 132 (51.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 244 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 303
>UNIPROTKB|G3V6V6 [details] [associations]
symbol:Lhx8 "RCG29002" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:1308749 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 EMBL:CH473952
OMA:MYWKSDQ Ensembl:ENSRNOT00000009370 Uniprot:G3V6V6
Length = 367
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 73/204 (35%), Positives = 110/204 (53%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ ++ +FCK D+F+R+GT
Sbjct: 96 CSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDYFRRYGT 155
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+C+ C I T VRRA+ VYHL CFAC C RQL+TG+EF L+E+ K++C+ ++
Sbjct: 156 RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEE-KVLCRVHFDCM 214
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + I+ + + N PKPA+ R + D ++V+Q
Sbjct: 215 -------LDNLKREVENGNGISVEGALLTEQDVN-HPKPAKRARTSFTAD---QLQVMQA 263
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 264 QFAQDNNPDAQTLQKLAERTGLSR 287
Score = 132 (51.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 244 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 303
>UNIPROTKB|A6H796 [details] [associations]
symbol:ISL1 "ISL1 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148
GO:GO:0003215 GO:GO:0060384 GO:GO:0021520 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:DAAA02050419 EMBL:BC146163
IPI:IPI00854388 RefSeq:NP_001092600.1 UniGene:Bt.28168 SMR:A6H796
STRING:A6H796 Ensembl:ENSBTAT00000001638 GeneID:614040
KEGG:bta:614040 InParanoid:A6H796 NextBio:20898906 Uniprot:A6H796
Length = 349
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 132
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 133 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 190
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/165 (32%), Positives = 76/165 (46%)
Query: 110 KCFARNGLLFCKEDFFKRFGTK--------CAGCEMGIPPTQVVRRAQDLVYHLNCFAC- 160
KC A+ + F K DF R +K C C + P +D ++ C A
Sbjct: 78 KC-AKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLF---CRADH 133
Query: 161 -VMCARQLNTGDEFY-LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNK--RPRTTITAKQL 216
V+ L GD L R L + +A+ QP K R RT + KQL
Sbjct: 134 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>UNIPROTKB|F1PP21 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:TDMGDMG EMBL:AAEX03003122
Ensembl:ENSCAFT00000029303 Uniprot:F1PP21
Length = 360
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 24 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 83
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 84 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 142
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 143 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 200
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 53/165 (32%), Positives = 76/165 (46%)
Query: 110 KCFARNGLLFCKEDFFKRFGTK--------CAGCEMGIPPTQVVRRAQDLVYHLNCFAC- 160
KC A+ + F K DF R +K C C + P +D ++ C A
Sbjct: 88 KC-AKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLF---CRADH 143
Query: 161 -VMCARQLNTGDEFY-LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNK--RPRTTITAKQL 216
V+ L GD L R L + +A+ QP K R RT + KQL
Sbjct: 144 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 203
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 204 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>UNIPROTKB|D6RBJ1 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HOGENOM:HOG000236304 HGNC:HGNC:6132
EMBL:AC010478 IPI:IPI00966899 ProteinModelPortal:D6RBJ1 SMR:D6RBJ1
Ensembl:ENST00000511384 ArrayExpress:D6RBJ1 Bgee:D6RBJ1
Uniprot:D6RBJ1
Length = 326
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 132
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 133 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 190
Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/165 (32%), Positives = 76/165 (46%)
Query: 110 KCFARNGLLFCKEDFFKRFGTK--------CAGCEMGIPPTQVVRRAQDLVYHLNCFAC- 160
KC A+ + F K DF R +K C C + P +D ++ C A
Sbjct: 78 KC-AKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLF---CRADH 133
Query: 161 -VMCARQLNTGDEFY-LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNK--RPRTTITAKQL 216
V+ L GD L R L + +A+ QP K R RT + KQL
Sbjct: 134 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>UNIPROTKB|P61371 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003266 "regulation of secondary heart
field cardioblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0031103 "axon regeneration"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=ISS] [GO:0010575 "positive
regulation vascular endothelial growth factor production"
evidence=ISS] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=ISS] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISS] [GO:0045766
"positive regulation of angiogenesis" evidence=ISS] [GO:0071657
"positive regulation of granulocyte colony-stimulating factor
production" evidence=ISS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0021522
"spinal cord motor neuron differentiation" evidence=ISS]
[GO:0048762 "mesenchymal cell differentiation" evidence=ISS]
[GO:0031016 "pancreas development" evidence=ISS] [GO:1901258
"positive regulation of macrophage colony-stimulating factor
production" evidence=ISS] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=ISS] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=ISS] [GO:0048665 "neuron fate
specification" evidence=ISS] [GO:0021559 "trigeminal nerve
development" evidence=ISS] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISS] [GO:0048880 "sensory system
development" evidence=ISS] [GO:0060384 "innervation" evidence=ISS]
[GO:0060413 "atrial septum morphogenesis" evidence=ISS] [GO:0060037
"pharyngeal system development" evidence=ISS] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=ISS]
[GO:0003215 "cardiac right ventricle morphogenesis" evidence=ISS]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0003148
"outflow tract septum morphogenesis" evidence=ISS] [GO:0003139
"secondary heart field specification" evidence=IMP] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0060913 "cardiac cell fate
determination" evidence=IDA] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=ISS] [GO:0032024 "positive
regulation of insulin secretion" evidence=IC] [GO:0090074 "negative
regulation of protein homodimerization activity" evidence=ISS]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=ISS] [GO:0030331 "estrogen receptor
binding" evidence=ISS] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0050728 GO:GO:0008270 GO:GO:0071385 GO:GO:0045665
GO:GO:0043524 GO:GO:0032755 GO:GO:0010575 GO:GO:0032024
GO:GO:0003700 GO:GO:0045766 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0060037 GO:GO:0090090 GO:GO:0032731 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0030331 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0048665 GO:GO:0032729
GO:GO:0032760 GO:GO:0016922 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0048762 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0032730 GO:GO:0032735 GO:GO:0071657
GO:GO:0060413 GO:GO:0033147 GO:GO:0003266 eggNOG:COG5576
GO:GO:0003148 GO:GO:0003215 GO:GO:0060384 GO:GO:0021520
GO:GO:0032725 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
EMBL:S70721 EMBL:U07559 EMBL:BC031213 IPI:IPI00025071 PIR:I53277
RefSeq:NP_002193.2 UniGene:Hs.505 ProteinModelPortal:P61371
SMR:P61371 IntAct:P61371 STRING:P61371 PhosphoSite:P61371
DMDM:47606423 PRIDE:P61371 DNASU:3670 Ensembl:ENST00000230658
GeneID:3670 KEGG:hsa:3670 UCSC:uc003jor.3 GeneCards:GC05P050714
HGNC:HGNC:6132 MIM:600366 neXtProt:NX_P61371 PharmGKB:PA29932
InParanoid:P61371 PhylomeDB:P61371 GenomeRNAi:3670 NextBio:14363
ArrayExpress:P61371 Bgee:P61371 CleanEx:HS_ISL1
Genevestigator:P61371 GermOnline:ENSG00000016082 GO:GO:0060913
GO:GO:0060379 GO:GO:0090074 GO:GO:0048880 GO:GO:0021524
Uniprot:P61371
Length = 349
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 132
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 133 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 190
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/165 (32%), Positives = 76/165 (46%)
Query: 110 KCFARNGLLFCKEDFFKRFGTK--------CAGCEMGIPPTQVVRRAQDLVYHLNCFAC- 160
KC A+ + F K DF R +K C C + P +D ++ C A
Sbjct: 78 KC-AKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLF---CRADH 133
Query: 161 -VMCARQLNTGDEFY-LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNK--RPRTTITAKQL 216
V+ L GD L R L + +A+ QP K R RT + KQL
Sbjct: 134 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>UNIPROTKB|F1SMF7 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 OMA:TDMGDMG GO:GO:0048936 GO:GO:0060913
GO:GO:0060379 GO:GO:0048880 GO:GO:0021524 EMBL:CU915536
Ensembl:ENSSSCT00000018387 Uniprot:F1SMF7
Length = 361
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 26 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 85
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 86 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 144
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 145 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 202
Score = 154 (59.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 53/165 (32%), Positives = 76/165 (46%)
Query: 110 KCFARNGLLFCKEDFFKRFGTK--------CAGCEMGIPPTQVVRRAQDLVYHLNCFAC- 160
KC A+ + F K DF R +K C C + P +D ++ C A
Sbjct: 90 KC-AKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLF---CRADH 145
Query: 161 -VMCARQLNTGDEFY-LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNK--RPRTTITAKQL 216
V+ L GD L R L + +A+ QP K R RT + KQL
Sbjct: 146 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 205
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 206 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 250
>MGI|MGI:101791 [details] [associations]
symbol:Isl1 "ISL1 transcription factor, LIM/homeodomain"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISO] [GO:0001755 "neural
crest cell migration" evidence=IGI] [GO:0003007 "heart
morphogenesis" evidence=IGI] [GO:0003139 "secondary heart field
specification" evidence=ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IGI] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IGI] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IGI] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007507
"heart development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IDA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISO]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021524 "visceral motor neuron
differentiation" evidence=IGI] [GO:0021559 "trigeminal nerve
development" evidence=IMP] [GO:0021983 "pituitary gland
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IGI;IMP] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0032725 "positive regulation of granulocyte
macrophage colony-stimulating factor production" evidence=IDA]
[GO:0032729 "positive regulation of interferon-gamma production"
evidence=IDA] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IDA] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IDA] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0042517 "positive regulation of tyrosine phosphorylation of
Stat3 protein" evidence=IDA] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI] [GO:0045766 "positive regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IGI]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0048762
"mesenchymal cell differentiation" evidence=IMP] [GO:0048880
"sensory system development" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IMP] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IGI] [GO:0060037 "pharyngeal system development"
evidence=IGI] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0060413 "atrial septum morphogenesis"
evidence=IGI] [GO:0060913 "cardiac cell fate determination"
evidence=ISO;IMP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IDA] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101791 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008284 GO:GO:0001755 GO:GO:0050728
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0032755
GO:GO:0010575 GO:GO:0032024 GO:GO:0003700 GO:GO:0045766
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0032731
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0032729 GO:GO:0032760
GeneTree:ENSGT00700000104050 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0032730 GO:GO:0032735 GO:GO:0071657 GO:GO:0060413
GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 GO:GO:0032725 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:AJ132765 EMBL:AB104633
IPI:IPI00121604 IPI:IPI00415262 RefSeq:NP_067434.3 UniGene:Mm.42242
PDB:2RGT PDBsum:2RGT ProteinModelPortal:P61372 SMR:P61372
MINT:MINT-4594016 STRING:P61372 PhosphoSite:P61372 PRIDE:P61372
Ensembl:ENSMUST00000036060 Ensembl:ENSMUST00000176044 GeneID:16392
KEGG:mmu:16392 UCSC:uc007ryf.2 InParanoid:P61372
EvolutionaryTrace:P61372 NextBio:289537 Bgee:P61372 CleanEx:MM_ISL1
Genevestigator:P61372 GermOnline:ENSMUSG00000042258 Uniprot:P61372
Length = 349
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 132
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 133 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 190
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/165 (32%), Positives = 76/165 (46%)
Query: 110 KCFARNGLLFCKEDFFKRFGTK--------CAGCEMGIPPTQVVRRAQDLVYHLNCFAC- 160
KC A+ + F K DF R +K C C + P +D ++ C A
Sbjct: 78 KC-AKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLF---CRADH 133
Query: 161 -VMCARQLNTGDEFY-LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNK--RPRTTITAKQL 216
V+ L GD L R L + +A+ QP K R RT + KQL
Sbjct: 134 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>RGD|61957 [details] [associations]
symbol:Isl1 "ISL LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA;ISO] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001755 "neural
crest cell migration" evidence=IEA;ISO] [GO:0003007 "heart
morphogenesis" evidence=ISO] [GO:0003139 "secondary heart field
specification" evidence=IEA;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA;ISO] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA;ISO] [GO:0003266 "regulation
of secondary heart field cardioblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007507 "heart development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA;ISO] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IDA;IPI]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0021559 "trigeminal nerve
development" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031016 "pancreas development" evidence=IEA;ISO] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA;ISO] [GO:0032729 "positive regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032730 "positive
regulation of interleukin-1 alpha production" evidence=IEA;ISO]
[GO:0032731 "positive regulation of interleukin-1 beta production"
evidence=IEA;ISO] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA;ISO] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA;ISO] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA;ISO]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042517 "positive regulation of
tyrosine phosphorylation of Stat3 protein" evidence=IEA;ISO]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA;ISO]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA;ISO]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045766 "positive regulation
of angiogenesis" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048663 "neuron fate commitment" evidence=ISO] [GO:0048665
"neuron fate specification" evidence=ISO] [GO:0048762 "mesenchymal
cell differentiation" evidence=ISO] [GO:0048880 "sensory system
development" evidence=IEA;ISO] [GO:0048936 "peripheral nervous
system neuron axonogenesis" evidence=IEA;ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060037 "pharyngeal system development" evidence=IEA;ISO]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA;ISO] [GO:0060384 "innervation" evidence=IEA;ISO]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0071385 "cellular response to glucocorticoid stimulus"
evidence=IEP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA;ISO] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:61957 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0001755 GO:GO:0043565 GO:GO:0008270 GO:GO:0071385
GO:GO:0045944 GO:GO:0045665 GO:GO:0043524 GO:GO:0032024
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0030331
GO:GO:0021559 GO:GO:0001158 GO:GO:0042517
GeneTree:ENSGT00700000104050 GO:GO:0016922 GO:GO:0031103
GO:GO:0055010 GO:GO:0003203 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0060413 GO:GO:0033147 GO:GO:0003266
eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215 GO:GO:0060384
GO:GO:0021520 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
GO:GO:0060913 GO:GO:0060379 GO:GO:0090074 GO:GO:0048880
GO:GO:0021524 EMBL:S69329 EMBL:AY557632 EMBL:X53258 IPI:IPI00201439
IPI:IPI00417237 PIR:I67417 RefSeq:NP_059035.3 UniGene:Rn.36202
ProteinModelPortal:P61374 SMR:P61374 STRING:P61374
PhosphoSite:P61374 PRIDE:P61374 Ensembl:ENSRNOT00000017305
GeneID:64444 KEGG:rno:64444 InParanoid:P61374 NextBio:613174
Genevestigator:P61374 GermOnline:ENSRNOG00000012556 Uniprot:P61374
Length = 349
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 132
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 133 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 190
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/165 (32%), Positives = 76/165 (46%)
Query: 110 KCFARNGLLFCKEDFFKRFGTK--------CAGCEMGIPPTQVVRRAQDLVYHLNCFAC- 160
KC A+ + F K DF R +K C C + P +D ++ C A
Sbjct: 78 KC-AKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLF---CRADH 133
Query: 161 -VMCARQLNTGDEFY-LMEDRKLVCKPDYEAAKAKDGNCLDGDQPNK--RPRTTITAKQL 216
V+ L GD L R L + +A+ QP K R RT + KQL
Sbjct: 134 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 193
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+K+
Sbjct: 194 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>ZFIN|ZDB-GENE-980526-112 [details] [associations]
symbol:isl1 "islet1" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IMP]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IGI;IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0055011 "atrial cardiac muscle cell differentiation"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-112 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0048665
GeneTree:ENSGT00700000104050 GO:GO:0031017 eggNOG:COG5576 CTD:3670
HOVERGEN:HBG004671 KO:K09370 EMBL:D21135 EMBL:AL954694
EMBL:BC060892 IPI:IPI00487340 PIR:I51739 RefSeq:NP_571037.1
UniGene:Dr.75106 ProteinModelPortal:P53405 SMR:P53405 STRING:P53405
Ensembl:ENSDART00000010896 GeneID:30147 KEGG:dre:30147
HOGENOM:HOG000236304 InParanoid:A2AWM5 OMA:TDMGDMG
OrthoDB:EOG4G4GQR NextBio:20806622 Bgee:P53405 GO:GO:0055011
GO:GO:0048936 Uniprot:P53405
Length = 349
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 70/179 (39%), Positives = 98/179 (54%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 74 LYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 132
Query: 187 YEAA-KAKDG-----NCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
++ +A G + L +P + I+A+Q L+ + P+ VR L++
Sbjct: 133 HDVVERATMGAGDPLSPLHPARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 190
Score = 161 (61.7 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 202 QPNK--RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 259
QP K R RT + KQL TL+ YN +P+P ++EQL + TGL RV++VWFQN+R K+
Sbjct: 177 QPEKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 236
Query: 260 KR 261
K+
Sbjct: 237 KK 238
Score = 90 (36.7 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 126 KRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKP 185
KR + C GC I ++R + DL +H C C C + L+ ++ D K CK
Sbjct: 11 KRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFV-RDGKTYCKR 69
Query: 186 DY 187
DY
Sbjct: 70 DY 71
>UNIPROTKB|H0YKY2 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0021524 "visceral motor neuron differentiation" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
GO:GO:0045665 GO:GO:0005622 Gene3D:2.10.110.10 GO:GO:0031290
EMBL:AC027243 GO:GO:0021520 GO:GO:0021524 HGNC:HGNC:18524
Ensembl:ENST00000558437 Bgee:H0YKY2 Uniprot:H0YKY2
Length = 145
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 58/118 (49%), Positives = 77/118 (65%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG I D+FIL+V + WHA CLKC EC L E C F R+G +CK D+ + FG
Sbjct: 2 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 61
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
KCA C++G + +V RA+D VYH+ CF C +C+RQL GDEF L E +L+C+ D+
Sbjct: 62 IKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLRE-HELLCRADH 118
>UNIPROTKB|P50211 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:L35567
IPI:IPI00598855 PIR:I50369 RefSeq:NP_990745.1 UniGene:Gga.1507
ProteinModelPortal:P50211 SMR:P50211 GeneID:396383 KEGG:gga:396383
CTD:3670 HOVERGEN:HBG004671 KO:K09370 NextBio:20816425
Uniprot:P50211
Length = 349
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 73/180 (40%), Positives = 97/180 (53%)
Query: 70 IPKCGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFK 126
I C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ +
Sbjct: 14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+G KCA C +G V RA+ VYH+ CF CV C+RQL GDEF L ED L C+ D
Sbjct: 74 LYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRAD 132
Query: 187 Y---EAAKAKDGNCLDGDQPNKRP----RTTITAKQLETLKMAYNTSPKPARHVREQLSQ 239
+ E A G+ L P RP I+A+Q L+ + P+ VR L++
Sbjct: 133 HDVVERASLGAGDPLSPLHP-ARPLQMAAEPISARQ-PALRPHVHKQPEKTTRVRTVLNE 190
Score = 153 (58.9 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 202 QPNK--RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 259
QP K R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+
Sbjct: 177 QPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 236
Query: 260 KR 261
K+
Sbjct: 237 KK 238
Score = 88 (36.0 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 126 KRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKP 185
KR + C GC I ++R + DL +H C C C + L+ ++ D K CK
Sbjct: 11 KRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFV-RDGKTYCKR 69
Query: 186 DY 187
DY
Sbjct: 70 DY 71
>ZFIN|ZDB-GENE-031008-2 [details] [associations]
symbol:lhx8a "LIM homeobox 8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-031008-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006261 KO:K09375 EMBL:BC117601 EMBL:AY664404
IPI:IPI00487481 RefSeq:NP_001003980.1 UniGene:Dr.82056
STRING:Q6BDC3 GeneID:378959 KEGG:dre:378959 CTD:378959
InParanoid:Q6BDC3 NextBio:20813902 Uniprot:Q6BDC3
Length = 332
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 71/204 (34%), Positives = 105/204 (51%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE--KCFARNGLLFCKEDFFKRFGT 130
C CG I+D+++LKV + WH RCL C C L C+ + +FCK D+F+++GT
Sbjct: 51 CTSCGTEIVDKYLLKVNDMCWHVRCLSCSVCQTSLGRHISCYIKEKEIFCKLDYFRKYGT 110
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAA 190
+CA C I VRRA+ YHL CFAC C RQL+TG+EF L+++R L C+ Y+
Sbjct: 111 RCAHCGRNIHSNDWVRRAKGNTYHLACFACFSCKRQLSTGEEFALVDERVL-CRVHYDCM 169
Query: 191 KAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQV 250
LD + + + + N PKPA+ R + D ++V+Q
Sbjct: 170 -------LDNLKRAMENGKGVNVEGAVPSEQEVN-QPKPAKRARTSFTAD---QLQVMQA 218
Query: 251 WF-QNRRAKEKRLKKDAGRTRWSQ 273
F Q+ + L+K A RT S+
Sbjct: 219 QFAQDNNPDAQTLQKLAERTGLSR 242
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 202 QPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 261
+P KR RT+ TA QL+ ++ + P ++L++ TGL RV+QVWFQN RA+ K+
Sbjct: 199 KPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKK 258
>UNIPROTKB|F1NL26 [details] [associations]
symbol:F1NL26 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02026365 EMBL:AADN02026363
EMBL:AADN02026364 IPI:IPI01017195 Ensembl:ENSGALT00000038819
Uniprot:F1NL26
Length = 234
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 82/217 (37%), Positives = 111/217 (51%)
Query: 66 PIASIPKCGGCGDLILDRFILKV--LERTWHARCLKCHECG-APLA--EKCFARNGLLFC 120
P A C CG ILDR++LKV E+ CG L C + C
Sbjct: 22 PSAGKNVCSSCGLEILDRYLLKVPAWEQLRGGLAAALSPCGLGGLGGFRGCCPPS---CC 78
Query: 121 KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRK 180
RFGTKCA C I + VRRA+ YHL CFAC C RQL+TG+EF L+E+ K
Sbjct: 79 VLSSRSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEE-K 137
Query: 181 LVCKPDYEAA------KAKDGN--CLDG----DQ-----PNKRPRTTITAKQLETLKMAY 223
++C+ Y+ A++GN L+G +Q P KR RT+ TA+QL+ ++ +
Sbjct: 138 VLCRIHYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQF 197
Query: 224 NTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEK 260
P ++L+ TGL RV+QVWFQN RA+ K
Sbjct: 198 AQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHK 234
>UNIPROTKB|Q5FVB2 [details] [associations]
symbol:lmo4.1 "LIM domain transcription factor LMO4.1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0045665 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0003712 GO:GO:0007369
GeneTree:ENSGT00700000104177 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 EMBL:BC090104 RefSeq:NP_001015822.1
UniGene:Str.52903 ProteinModelPortal:Q5FVB2 SMR:Q5FVB2
Ensembl:ENSXETT00000050669 GeneID:548539 KEGG:xtr:548539 CTD:548539
Xenbase:XB-GENE-479327 eggNOG:NOG314117 InParanoid:Q5FVB2
OMA:DRYWHTR OrthoDB:EOG4XKV82 Bgee:Q5FVB2 Uniprot:Q5FVB2
Length = 167
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 52/122 (42%), Positives = 72/122 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GCG I DRF+L +ER WH RCLKC C A L E C+ ++G++ C+ D+ +
Sbjct: 21 PKACAGCGGKIADRFLLYSMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIR 80
Query: 127 RFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG+ C+ C IP +++V RAQ VYHL CF C C +L GD F+ + + C+
Sbjct: 81 LFGSSGACSACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGA-IFCE 139
Query: 185 PD 186
D
Sbjct: 140 HD 141
>RGD|621166 [details] [associations]
symbol:Lmo1 "LIM domain only 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:621166
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:2.10.110.10 eggNOG:NOG316748 HOGENOM:HOG000232175
HOVERGEN:HBG054231 OrthoDB:EOG405S2K EMBL:AF353304 IPI:IPI00197708
UniGene:Rn.25503 ProteinModelPortal:Q99MB5 SMR:Q99MB5 STRING:Q99MB5
UCSC:RGD:621166 InParanoid:Q99MB5 Genevestigator:Q99MB5
GermOnline:ENSRNOG00000008041 Uniprot:Q99MB5
Length = 145
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 52/128 (40%), Positives = 77/128 (60%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFKRFG 129
C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ + FG
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 130 T--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
T CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+ DY
Sbjct: 73 TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQTDY 131
Query: 188 EAAKAKDG 195
E K+G
Sbjct: 132 EEGLMKEG 139
>UNIPROTKB|Q99MB5 [details] [associations]
symbol:Lmo3 "LIM domain only protein 3" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 RGD:621166 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 eggNOG:NOG316748
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:AF353304 IPI:IPI00197708 UniGene:Rn.25503
ProteinModelPortal:Q99MB5 SMR:Q99MB5 STRING:Q99MB5 UCSC:RGD:621166
InParanoid:Q99MB5 Genevestigator:Q99MB5
GermOnline:ENSRNOG00000008041 Uniprot:Q99MB5
Length = 145
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 52/128 (40%), Positives = 77/128 (60%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFKRFG 129
C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ + FG
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 130 T--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
T CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+ DY
Sbjct: 73 TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQTDY 131
Query: 188 EAAKAKDG 195
E K+G
Sbjct: 132 EEGLMKEG 139
>UNIPROTKB|Q6DJ06 [details] [associations]
symbol:lmo4.2 "LIM domain transcription factor LMO4.2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0045665 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0003712 GO:GO:0007369
GeneTree:ENSGT00700000104177 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 EMBL:CR760333 EMBL:BC075379
RefSeq:NP_001004922.1 UniGene:Str.145 ProteinModelPortal:Q6DJ06
SMR:Q6DJ06 Ensembl:ENSXETT00000053847 GeneID:448304 KEGG:xtr:448304
CTD:447751 Xenbase:XB-GENE-971939 InParanoid:Q6DJ06 OMA:ALSWKRC
Bgee:Q6DJ06 Uniprot:Q6DJ06
Length = 165
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 53/134 (39%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L E C+ ++G++
Sbjct: 12 PVTASTLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>UNIPROTKB|F1NBH3 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:HTEIGIY EMBL:AADN02006566
EMBL:AADN02006567 EMBL:AADN02006568 IPI:IPI00590236
Ensembl:ENSGALT00000009596 Uniprot:F1NBH3
Length = 147
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 12 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 71
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 72 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 130
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 131 TDYEEGLMKEG 141
>UNIPROTKB|Q2KIA3 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:BC112712 IPI:IPI00722914 RefSeq:NP_001039802.1
UniGene:Bt.97510 ProteinModelPortal:Q2KIA3 SMR:Q2KIA3
Ensembl:ENSBTAT00000043044 GeneID:532870 KEGG:bta:532870 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
InParanoid:Q2KIA3 OMA:HTEIGIY OrthoDB:EOG405S2K NextBio:20875832
Uniprot:Q2KIA3
Length = 145
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 128
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 129 TDYEEGLMKEG 139
>UNIPROTKB|E2RHK8 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 EMBL:AAEX03015233
RefSeq:XP_003433617.1 ProteinModelPortal:E2RHK8
Ensembl:ENSCAFT00000020038 GeneID:486662 KEGG:cfa:486662
Uniprot:E2RHK8
Length = 156
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 21 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 80
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 81 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 139
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 140 TDYEEGLMKEG 150
>UNIPROTKB|J9NZN8 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 OMA:HTEIGIY
EMBL:AAEX03015233 GeneID:486662 KEGG:cfa:486662 RefSeq:XP_866550.2
Ensembl:ENSCAFT00000044444 Uniprot:J9NZN8
Length = 163
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 28 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 87
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 88 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 146
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 147 TDYEEGLMKEG 157
>UNIPROTKB|J9P4K0 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 EMBL:AAEX03015233
GeneID:486662 KEGG:cfa:486662 RefSeq:XP_866536.1
ProteinModelPortal:J9P4K0 Ensembl:ENSCAFT00000048736 Uniprot:J9P4K0
Length = 145
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 128
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 129 TDYEEGLMKEG 139
>UNIPROTKB|B4DG90 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 CTD:55885
HOGENOM:HOG000232175 HOVERGEN:HBG054231 EMBL:AC007529 EMBL:AC007552
RefSeq:NP_001001395.1 UniGene:Hs.504908 DNASU:55885 GeneID:55885
KEGG:hsa:55885 HGNC:HGNC:6643 GenomeRNAi:55885 NextBio:61212
EMBL:AK294474 EMBL:AK316021 IPI:IPI00910185 RefSeq:NP_001230541.1
SMR:B4DG90 STRING:B4DG90 Ensembl:ENST00000541295 UCSC:uc010shy.2
Uniprot:B4DG90
Length = 163
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 28 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 87
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 88 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 146
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 147 TDYEEGLMKEG 157
>UNIPROTKB|Q8TAP4 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 EMBL:CH471094 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:AB044745 EMBL:AB044746
EMBL:AK095595 EMBL:AK294909 EMBL:AC007529 EMBL:AC007552
EMBL:BC026311 EMBL:BC050085 IPI:IPI00744307 RefSeq:NP_001001395.1
RefSeq:NP_001230538.1 RefSeq:NP_001230539.1 RefSeq:NP_001230540.1
RefSeq:NP_001230542.1 RefSeq:NP_061110.2 UniGene:Hs.504908
ProteinModelPortal:Q8TAP4 SMR:Q8TAP4 IntAct:Q8TAP4
MINT:MINT-2874669 STRING:Q8TAP4 PhosphoSite:Q8TAP4 DMDM:34098603
PRIDE:Q8TAP4 DNASU:55885 Ensembl:ENST00000261169
Ensembl:ENST00000320122 Ensembl:ENST00000354662
Ensembl:ENST00000441439 Ensembl:ENST00000447609
Ensembl:ENST00000534946 Ensembl:ENST00000535535
Ensembl:ENST00000537304 Ensembl:ENST00000540445
Ensembl:ENST00000540848 Ensembl:ENST00000541846 GeneID:55885
KEGG:hsa:55885 UCSC:uc001rdk.2 GeneCards:GC12M016701 HGNC:HGNC:6643
MIM:180386 neXtProt:NX_Q8TAP4 PharmGKB:PA30409 InParanoid:Q8TAP4
PhylomeDB:Q8TAP4 GenomeRNAi:55885 NextBio:61212 ArrayExpress:Q8TAP4
Bgee:Q8TAP4 CleanEx:HS_LMO3 Genevestigator:Q8TAP4
GermOnline:ENSG00000048540 Uniprot:Q8TAP4
Length = 145
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 128
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 129 TDYEEGLMKEG 139
>UNIPROTKB|A9ED84 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:CU915363 EMBL:AB304400
RefSeq:NP_001106155.1 UniGene:Ssc.8086 SMR:A9ED84
Ensembl:ENSSSCT00000000642 GeneID:100127154 KEGG:ssc:100127154
eggNOG:NOG315878 Uniprot:A9ED84
Length = 145
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 128
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 129 TDYEEGLMKEG 139
>MGI|MGI:102810 [details] [associations]
symbol:Lmo3 "LIM domain only 3" species:10090 "Mus musculus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
MGI:MGI:102810 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
CTD:55885 eggNOG:NOG316748 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:AK034177 EMBL:BC057086 IPI:IPI00406211 RefSeq:NP_997105.1
UniGene:Mm.490545 ProteinModelPortal:Q8BZL8 SMR:Q8BZL8
STRING:Q8BZL8 PhosphoSite:Q8BZL8 PRIDE:Q8BZL8
Ensembl:ENSMUST00000161450 Ensembl:ENSMUST00000162772
Ensembl:ENSMUST00000163024 GeneID:109593 KEGG:mmu:109593
UCSC:uc009enl.1 InParanoid:Q8BZL8 NextBio:362405 Bgee:Q8BZL8
CleanEx:MM_LMO3 Genevestigator:Q8BZL8 GermOnline:ENSMUSG00000030226
Uniprot:Q8BZL8
Length = 145
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 128
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 129 TDYEEGLMKEG 139
>RGD|1561357 [details] [associations]
symbol:RGD1561357 "similar to LIM domain only 3" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 RGD:1561357 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 OMA:HTEIGIY IPI:IPI00480651
RefSeq:XP_003749911.1 ProteinModelPortal:F2Z3R1 SMR:F2Z3R1
Ensembl:ENSRNOT00000010623 GeneID:497798 KEGG:rno:497798 CTD:497798
Uniprot:F2Z3R1
Length = 145
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 128
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 129 TDYEEGLMKEG 139
>UNIPROTKB|H9L043 [details] [associations]
symbol:H9L043 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02053375
Ensembl:ENSGALT00000021923 OMA:CECERRL Uniprot:H9L043
Length = 280
Score = 172 (65.6 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 32/61 (52%), Positives = 44/61 (72%)
Query: 204 NKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLK 263
+KRPRT +T +Q K ++ S KP R VRE L+ +TGL +RVVQVWFQN+RAK K++
Sbjct: 103 SKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKKIA 162
Query: 264 K 264
+
Sbjct: 163 R 163
Score = 161 (61.7 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
F TKC+ C I P++++ R + VYH++CF C C R+L GDEF L E + L+C+ DY
Sbjct: 3 FQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQ-LLCRSDY 61
Query: 188 EAAK 191
E K
Sbjct: 62 EKEK 65
Score = 88 (36.0 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 72 KCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KC C I I++VLE +H C C EC L ++ + G L C+ D+ K
Sbjct: 6 KCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDYEK 63
Score = 41 (19.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 283 SPKDELKIDLDSNFSHSHGK 302
+P + +K + D + HSHGK
Sbjct: 74 APTESVKSE-DEDGGHSHGK 92
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 52/109 (47%), Positives = 68/109 (62%)
Query: 86 LKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKCAGCEMGIPPTQVV 145
++V E +WH CL+C C L C+ R+ L+CK+D+ + F KC+GC I PT+ V
Sbjct: 1 MRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCMEKIAPTEFV 60
Query: 146 RRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEAAKAKD 194
RA + VYHL CF C +C RQL GDEF L E + L+CK DYE K KD
Sbjct: 61 MRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDYE--KEKD 106
Score = 186 (70.5 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 122 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 181
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 182 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 211
Score = 85 (35.0 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 72 KCGGCGDLILD-RFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KC GC + I F+++ LE +H C C C L ++ + G L CK D+ K
Sbjct: 46 KCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 103
>UNIPROTKB|Q801P0 [details] [associations]
symbol:lmo4-b "LIM domain transcription factor LMO4-B"
species:8355 "Xenopus laevis" [GO:0003712 "transcription cofactor
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007498 "mesoderm development" evidence=ISS]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0007498 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0045665 GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0003712
GO:GO:0007369 HSSP:P61969 HOVERGEN:HBG054231 EMBL:BC048020
RefSeq:NP_001079705.1 UniGene:Xl.15362 ProteinModelPortal:Q801P0
SMR:Q801P0 GeneID:379392 KEGG:xla:379392 CTD:379392
Xenbase:XB-GENE-6256064 Uniprot:Q801P0
Length = 171
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 52/124 (41%), Positives = 71/124 (57%)
Query: 69 SIPK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDF 124
S PK C GCG I DRF+L ++R WH RCLKC C A L E C+ ++G++ C+ D+
Sbjct: 19 SPPKACAGCGGKIADRFLLYSMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDY 78
Query: 125 FKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
+ FG C C IP +++V RAQ VYHL CF C C +L GD F+ + +
Sbjct: 79 IRLFGNSGACNACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGT-IF 137
Query: 183 CKPD 186
C+ D
Sbjct: 138 CEHD 141
>UNIPROTKB|E1BYB0 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02012827 EMBL:AADN02012828
IPI:IPI00819278 Ensembl:ENSGALT00000010105 ArrayExpress:E1BYB0
Uniprot:E1BYB0
Length = 165
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 12 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>UNIPROTKB|F1P113 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003281 "ventricular septum
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0050865 "regulation of cell
activation" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0006366 GO:GO:0001158 GO:GO:0042659
GeneTree:ENSGT00700000104177 OMA:ALSWKRC GO:GO:0050865
EMBL:AADN02012827 EMBL:AADN02012828 IPI:IPI00582860
Ensembl:ENSGALT00000033333 ArrayExpress:F1P113 Uniprot:F1P113
Length = 174
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 21 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 80
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 81 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 140
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 141 NG-SLFCEHDRPTA 153
>UNIPROTKB|Q3SWZ8 [details] [associations]
symbol:LMO4 "LIM domain transcription factor LMO4"
species:9913 "Bos taurus" [GO:0050865 "regulation of cell
activation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0042659
"regulation of cell fate specification" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003281 "ventricular septum development" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366 GO:GO:0001843
GO:GO:0048538 GO:GO:0001158 GO:GO:0021527 GO:GO:0042659
GO:GO:0003281 GO:GO:0021514 GeneTree:ENSGT00700000104177
HOGENOM:HOG000232175 HOVERGEN:HBG054231 eggNOG:NOG314117
OrthoDB:EOG4XKV82 OMA:ALSWKRC EMBL:BC104582 IPI:IPI00705980
RefSeq:NP_001029923.1 UniGene:Bt.3730 ProteinModelPortal:Q3SWZ8
SMR:Q3SWZ8 PRIDE:Q3SWZ8 Ensembl:ENSBTAT00000000389 GeneID:614212
KEGG:bta:614212 CTD:8543 InParanoid:Q3SWZ8 NextBio:20898998
GO:GO:0050865 Uniprot:Q3SWZ8
Length = 165
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 12 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>UNIPROTKB|E2QSI3 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050865 "regulation of cell activation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042659 "regulation of
cell fate specification" evidence=IEA] [GO:0031333 "negative
regulation of protein complex assembly" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003281 "ventricular septum
development" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0031333 GO:GO:0008270
GO:GO:0045944 GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0006366 GO:GO:0001843 GO:GO:0048538 GO:GO:0001158
GO:GO:0021527 GO:GO:0042659 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 OMA:ALSWKRC CTD:8543 GO:GO:0050865
EMBL:AAEX03004843 EMBL:AAEX03004844 RefSeq:XP_003434840.1
RefSeq:XP_537086.1 RefSeq:XP_867313.1 SMR:E2QSI3
Ensembl:ENSCAFT00000036423 GeneID:479962 KEGG:cfa:479962
NextBio:20855066 Uniprot:E2QSI3
Length = 165
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 12 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>UNIPROTKB|P61968 [details] [associations]
symbol:LMO4 "LIM domain transcription factor LMO4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0003281 "ventricular septum development"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0050865 "regulation of cell
activation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0001843 "neural tube closure" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0031333 GO:GO:0008270
GO:GO:0045944 Pathway_Interaction_DB:il6_7pathway GO:GO:0003700
EMBL:CH471097 GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0006366 GO:GO:0001843 GO:GO:0048538 GO:GO:0008134
GO:GO:0001158 GO:GO:0021527 GO:GO:0042659 GO:GO:0003281 PDB:2L4Z
PDBsum:2L4Z GO:GO:0021514 HOGENOM:HOG000232175 HOVERGEN:HBG054231
eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC CTD:8543
GO:GO:0050865 EMBL:U24576 EMBL:BC003600 EMBL:BC017673 EMBL:BC065818
IPI:IPI00297604 RefSeq:NP_006760.1 UniGene:Hs.436792
ProteinModelPortal:P61968 SMR:P61968 IntAct:P61968 MINT:MINT-265427
STRING:P61968 DMDM:48428992 PRIDE:P61968 Ensembl:ENST00000370542
Ensembl:ENST00000370544 GeneID:8543 KEGG:hsa:8543 UCSC:uc001dmi.3
GeneCards:GC01P087794 HGNC:HGNC:6644 HPA:CAB022345 MIM:603129
neXtProt:NX_P61968 PharmGKB:PA30410 InParanoid:P61968
PhylomeDB:P61968 ChiTaRS:LMO4 EvolutionaryTrace:P61968
GenomeRNAi:8543 NextBio:32002 Bgee:P61968 CleanEx:HS_LMO4
Genevestigator:P61968 GermOnline:ENSG00000143013 Uniprot:P61968
Length = 165
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 12 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>UNIPROTKB|A9ED91 [details] [associations]
symbol:LMO4 "LIM domain only 4" species:9823 "Sus scrofa"
[GO:0050865 "regulation of cell activation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0042659 "regulation of cell fate
specification" evidence=IEA] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEA]
[GO:0021514 "ventral spinal cord interneuron differentiation"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003281 "ventricular septum development"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0031333 GO:GO:0008270 GO:GO:0045944
GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366
GO:GO:0001843 GO:GO:0048538 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC
CTD:8543 GO:GO:0050865 EMBL:CU550656 EMBL:AB304401
RefSeq:NP_001106156.1 UniGene:Ssc.9714 ProteinModelPortal:A9ED91
SMR:A9ED91 STRING:A9ED91 PRIDE:A9ED91 Ensembl:ENSSSCT00000007590
GeneID:100127155 KEGG:ssc:100127155 Uniprot:A9ED91
Length = 165
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 12 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>UNIPROTKB|Q9YH16 [details] [associations]
symbol:lmo3 "LIM domain only protein 3" species:8355
"Xenopus laevis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 HSSP:P61969 HOVERGEN:HBG054231
EMBL:U94991 EMBL:BC079734 RefSeq:NP_001084116.1 UniGene:Xl.6611
ProteinModelPortal:Q9YH16 SMR:Q9YH16 GeneID:399311 KEGG:xla:399311
CTD:399311 Xenbase:XB-GENE-6254052 Uniprot:Q9YH16
Length = 156
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/131 (39%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 21 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 80
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA++ VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 81 LFGVTGNCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 139
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 140 TDYEEGLMKEG 150
>MGI|MGI:109360 [details] [associations]
symbol:Lmo4 "LIM domain only 4" species:10090 "Mus musculus"
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0001843 "neural tube closure" evidence=IMP] [GO:0003281
"ventricular septum development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008134 "transcription
factor binding" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IDA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IDA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IGI] [GO:0031333
"negative regulation of protein complex assembly" evidence=IDA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI] [GO:0050865 "regulation of cell activation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:109360 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366 GO:GO:0001843
GO:GO:0048538 GO:GO:0008134 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 GO:GO:0003281 GO:GO:0021514 PDB:1M3V PDB:1RUT
PDBsum:1M3V PDBsum:1RUT HOGENOM:HOG000232175 HOVERGEN:HBG054231
eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC CTD:8543
GO:GO:0050865 ChiTaRS:LMO4 EMBL:AF074600 EMBL:AF102817
EMBL:AF096996 EMBL:BC003488 EMBL:BC004661 EMBL:BC010278
IPI:IPI00281974 RefSeq:NP_001155241.1 RefSeq:NP_001155242.1
RefSeq:NP_034853.1 UniGene:Mm.29187 PDB:2DFY PDBsum:2DFY
ProteinModelPortal:P61969 SMR:P61969 STRING:P61969 PRIDE:P61969
Ensembl:ENSMUST00000120539 Ensembl:ENSMUST00000121112
Ensembl:ENSMUST00000121796 GeneID:16911 KEGG:mmu:16911
InParanoid:P61969 EvolutionaryTrace:P61969 NextBio:290952
Bgee:P61969 CleanEx:MM_LMO4 Genevestigator:P61969 Uniprot:P61969
Length = 165
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 12 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>RGD|1305670 [details] [associations]
symbol:Lmo4 "LIM domain only 4" species:10116 "Rattus
norvegicus" [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0003281 "ventricular septum development"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0008134 "transcription factor
binding" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA;ISO] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA;ISO] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA;ISO] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0042659 "regulation of cell fate specification"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048538
"thymus development" evidence=IEA;ISO] [GO:0050865 "regulation of
cell activation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1305670
GO:GO:0046872 GO:GO:0031333 GO:GO:0008270 GO:GO:0045944
GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366
GO:GO:0001843 GO:GO:0048538 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 EMBL:CH473952 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OrthoDB:EOG4XKV82 CTD:8543
GO:GO:0050865 EMBL:BC087700 IPI:IPI00202852 RefSeq:NP_001009708.1
UniGene:Rn.2517 SMR:Q5PPG8 STRING:Q5PPG8 Ensembl:ENSRNOT00000067502
GeneID:362051 KEGG:rno:362051 UCSC:RGD:1305670 InParanoid:Q5PPG8
NextBio:678516 Genevestigator:Q5PPG8 Uniprot:Q5PPG8
Length = 165
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/134 (38%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L + C+ ++G++
Sbjct: 12 PVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>ZFIN|ZDB-GENE-050522-201 [details] [associations]
symbol:lmo3 "LIM domain only 3" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-050522-201 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OMA:HTEIGIY EMBL:AL954848
IPI:IPI00855464 UniGene:Dr.85219 SMR:B0R1F5
Ensembl:ENSDART00000112860 Uniprot:B0R1F5
Length = 167
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/131 (39%), Positives = 78/131 (59%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 32 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 91
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
FG CA C IP ++V RA++ VYHL+CFAC +C ++ GD+F+L ++ ++C+
Sbjct: 92 LFGVTGNCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQ 150
Query: 185 PDYEAAKAKDG 195
DYE K+G
Sbjct: 151 TDYEEGLMKEG 161
>ZFIN|ZDB-GENE-040426-1099 [details] [associations]
symbol:zgc:56628 "zgc:56628" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-040426-1099
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 HSSP:P70662 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 EMBL:BX927330 EMBL:BC049054
IPI:IPI00512792 RefSeq:NP_956566.1 UniGene:Dr.18443 SMR:Q7ZUG7
Ensembl:ENSDART00000022112 GeneID:393242 KEGG:dre:393242
OMA:TELRTCV NextBio:20814305 Uniprot:Q7ZUG7
Length = 172
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 56/135 (41%), Positives = 72/135 (53%)
Query: 72 KCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFKRF 128
+C GCG I DRF+L L+ WH CLKC C A LAE CF + GL+ CK D+ + F
Sbjct: 33 RCVGCGCKISDRFLLFALDGYWHCHCLKCSCCQAQLAEIGSSCFTKRGLILCKSDYLRLF 92
Query: 129 GTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
G C C IP ++V RAQ V+H+ CF C +C QL GD F+ KL C+ D
Sbjct: 93 GHSGACRACGTSIPANEMVMRAQGNVFHVKCFVCSICHNQLVPGDRFHYANG-KLYCERD 151
Query: 187 YEAAKAKDGNCLDGD 201
AA + + D
Sbjct: 152 KSAASEHSDSLREHD 166
>ZFIN|ZDB-GENE-010702-1 [details] [associations]
symbol:lmo4a "LIM domain only 4a" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0030900 "forebrain
development" evidence=IMP;IDA] [GO:0031076 "embryonic camera-type
eye development" evidence=IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-010702-1 GO:GO:0046872
GO:GO:0008270 GO:GO:0030900 Gene3D:2.10.110.10 GO:GO:0031076
GeneTree:ENSGT00700000104177 HSSP:P70662 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OMA:DRYWHTR EMBL:CR855258
EMBL:BC045835 EMBL:AY028903 IPI:IPI00495249 RefSeq:NP_817093.1
UniGene:Dr.107376 SMR:Q8QG63 STRING:Q8QG63
Ensembl:ENSDART00000085219 GeneID:114412 KEGG:dre:114412 CTD:114412
InParanoid:Q8QG63 OrthoDB:EOG4T4CWR NextBio:20796903 Uniprot:Q8QG63
Length = 167
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 50/123 (40%), Positives = 71/123 (57%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
++ C GCG I DRF+L ++R WH RCLKC C A L E CF++ G++ C+ D+
Sbjct: 20 AVRSCAGCGGRISDRFLLFSMDRYWHTRCLKCSCCQAQLGEIGSTCFSKGGMILCRNDYI 79
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ + + C
Sbjct: 80 RLFGHSGACSACGQSIPASEMVMRAQGNVYHLKCFTCATCRNRLVPGDRFHYVNGT-IFC 138
Query: 184 KPD 186
+ D
Sbjct: 139 EHD 141
>ZFIN|ZDB-GENE-030131-3570 [details] [associations]
symbol:lmo4b "LIM domain only 4b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-030131-3570 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:P70662 HOVERGEN:HBG054231 EMBL:AF398515
IPI:IPI00497185 RefSeq:NP_997854.1 UniGene:Dr.78922
ProteinModelPortal:Q8JFQ1 SMR:Q8JFQ1 STRING:Q8JFQ1 GeneID:324849
KEGG:dre:324849 CTD:324849 InParanoid:Q8JFQ1 NextBio:20808994
ArrayExpress:Q8JFQ1 Uniprot:Q8JFQ1
Length = 165
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/134 (39%), Positives = 74/134 (55%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK---CFARNGLL 118
PV S +C GCG I DRF+L ++ WH+RCLKC C A L E C+ ++G++
Sbjct: 12 PVGAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTFCYTKSGMI 71
Query: 119 FCKEDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLM 176
C+ D+ + FG C+ C IP +++V RAQ VYHL CF C C +L GD F+ +
Sbjct: 72 LCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI 131
Query: 177 EDRKLVCKPDYEAA 190
L C+ D A
Sbjct: 132 NG-SLFCEHDRPTA 144
>ZFIN|ZDB-GENE-081105-149 [details] [associations]
symbol:si:dkey-90l8.3 "si:dkey-90l8.3" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-081105-149 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177 EMBL:CU984584
IPI:IPI00501922 Ensembl:ENSDART00000074551 Uniprot:F1QMD9
Length = 165
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 53/124 (42%), Positives = 73/124 (58%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFKR-F 128
C GCG I DRF+L +ER WH+RCLKC C A L E C++++G++ C+ D+ R F
Sbjct: 24 CAGCGGRISDRFLLFSMERYWHSRCLKCSCCQAQLGEIGSTCYSKSGMILCRTDYISRLF 83
Query: 129 GTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
G C+ C IP +++V RAQ VYHL CF+C C QL GD F+ + + C+ D
Sbjct: 84 GHTGACSACGQSIPASEMVMRAQGNVYHLKCFSCATCRNQLVPGDRFHYVNGT-IFCEHD 142
Query: 187 YEAA 190
A
Sbjct: 143 RPGA 146
>UNIPROTKB|Q8AW92 [details] [associations]
symbol:lmo4-a "LIM domain transcription factor LMO4-A"
species:8355 "Xenopus laevis" [GO:0003712 "transcription cofactor
activity" evidence=IMP] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007498 "mesoderm development" evidence=IMP]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0007498 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0045665 GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0003712
GO:GO:0007369 HSSP:P61969 HOVERGEN:HBG054231 EMBL:AJ511277
EMBL:BC108585 RefSeq:NP_001079179.1 UniGene:Xl.5131
ProteinModelPortal:Q8AW92 SMR:Q8AW92 GeneID:373776 KEGG:xla:373776
CTD:373776 Xenbase:XB-GENE-865262 Uniprot:Q8AW92
Length = 171
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 52/124 (41%), Positives = 71/124 (57%)
Query: 69 SIPK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDF 124
S PK C GCG I DRF+L ++R WH RCLKC C A L E C+ ++G++ C+ D+
Sbjct: 19 SPPKACAGCGGKIGDRFLLYSMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDY 78
Query: 125 FKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLV 182
+ FG C C IP +++V RAQ VYHL CF C C +L GD F+ + +
Sbjct: 79 IRLFGNSGACNACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGT-IF 137
Query: 183 CKPD 186
C+ D
Sbjct: 138 CEHD 141
>ZFIN|ZDB-GENE-021115-6 [details] [associations]
symbol:lmo1 "LIM domain only 1" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-021115-6 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 OrthoDB:EOG405S2K CTD:4004 eggNOG:NOG288849
OMA:GSFETQV EMBL:AF398514 EMBL:BC092690 IPI:IPI00488481
RefSeq:NP_775326.1 UniGene:Dr.77277 ProteinModelPortal:Q8JFQ2
SMR:Q8JFQ2 STRING:Q8JFQ2 Ensembl:ENSDART00000044208 GeneID:280646
KEGG:dre:280646 InParanoid:Q8JFQ2 NextBio:20804856
ArrayExpress:Q8JFQ2 Bgee:Q8JFQ2 Uniprot:Q8JFQ2
Length = 155
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 54/137 (39%), Positives = 79/137 (57%)
Query: 58 EGI-MPVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFA 113
EG+ M P C GC I DR++LK L++ WH CLKC C L E +
Sbjct: 7 EGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYT 66
Query: 114 RNGLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGD 171
+ L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD
Sbjct: 67 KANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGD 126
Query: 172 EFYLMEDRKLVCKPDYE 188
+F+L ++ ++C+ DYE
Sbjct: 127 KFFL-KNNMILCQMDYE 142
>UNIPROTKB|F1NBH5 [details] [associations]
symbol:LOC100858792 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0045944 GO:GO:0000122 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:GSFETQV EMBL:AADN02030560
IPI:IPI00812377 Ensembl:ENSGALT00000009595 Uniprot:F1NBH5
Length = 156
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 10 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 69
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 129
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 130 FL-KNNMILCQMDYE 143
>UNIPROTKB|E2RLZ2 [details] [associations]
symbol:LMO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0000122 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
CTD:4004 OMA:GSFETQV EMBL:AAEX03012888 RefSeq:XP_851199.1
ProteinModelPortal:E2RLZ2 Ensembl:ENSCAFT00000011097 GeneID:610473
KEGG:cfa:610473 Uniprot:E2RLZ2
Length = 156
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 10 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 69
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 129
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 130 FL-KNNMILCQMDYE 143
>UNIPROTKB|E9PSF5 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 CTD:4004
EMBL:AC091013 UniGene:Hs.654426 GeneID:4004 KEGG:hsa:4004
HGNC:HGNC:6641 ChiTaRS:LMO1 IPI:IPI00877062 RefSeq:NP_001257357.1
ProteinModelPortal:E9PSF5 SMR:E9PSF5 Ensembl:ENST00000428101
UCSC:uc001mgh.1 ArrayExpress:E9PSF5 Bgee:E9PSF5 Uniprot:E9PSF5
Length = 155
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 9 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 68
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 69 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 128
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 129 FL-KNNMILCQMDYE 142
>UNIPROTKB|P25800 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 HOGENOM:HOG000232175 HOVERGEN:HBG054231
OrthoDB:EOG405S2K CTD:4004 eggNOG:NOG288849 OMA:GSFETQV EMBL:M26682
EMBL:AJ277662 EMBL:AC091013 EMBL:BC069673 EMBL:BC069752
EMBL:BC069793 EMBL:BC096056 EMBL:BC096057 IPI:IPI00396316
PIR:A32795 RefSeq:NP_002306.1 UniGene:Hs.654426
ProteinModelPortal:P25800 SMR:P25800 STRING:P25800
PhosphoSite:P25800 DMDM:132532 PRIDE:P25800 DNASU:4004
Ensembl:ENST00000335790 GeneID:4004 KEGG:hsa:4004 UCSC:uc001mgg.1
GeneCards:GC11M008202 HGNC:HGNC:6641 MIM:186921 neXtProt:NX_P25800
PharmGKB:PA30407 InParanoid:P25800 ChiTaRS:LMO1 GenomeRNAi:4004
NextBio:15708 PMAP-CutDB:P25800 ArrayExpress:P25800 Bgee:P25800
CleanEx:HS_LMO1 Genevestigator:P25800 GermOnline:ENSG00000166407
Uniprot:P25800
Length = 156
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 10 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 69
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 129
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 130 FL-KNNMILCQMDYE 143
>UNIPROTKB|P91608 [details] [associations]
symbol:Bx "Dttg protein" species:7242 "Drosophila sp."
[GO:0002121 "inter-male aggressive behavior" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IGI;IMP] [GO:0035218 "leg disc development"
evidence=IMP] [GO:0036011 "imaginal disc-derived leg segmentation"
evidence=IMP] [GO:0042220 "response to cocaine" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0006911 GO:GO:0046872 GO:GO:0042220
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0002121 GO:GO:0045475
GO:GO:0007476 GO:GO:0036011 HSSP:P70662 EMBL:X83012
ProteinModelPortal:P91608 SMR:P91608 FlyBase:FBgn0000242
InParanoid:P91608 Uniprot:P91608
Length = 266
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 52/121 (42%), Positives = 69/121 (57%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFKRFG 129
C GCG I DR++L+ L+ WH CLKC C L E + + L+ CK D+ + FG
Sbjct: 45 CAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFG 104
Query: 130 TK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
CA C IP ++V RA+ VYHL CFAC C + GD FYL E+ K++C+ DY
Sbjct: 105 NTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCEN-KILCEYDY 163
Query: 188 E 188
E
Sbjct: 164 E 164
>UNIPROTKB|Q3B8H4 [details] [associations]
symbol:lmo1 "Rhombotin-1" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q13642 HOVERGEN:HBG054231 CTD:4004
EMBL:BC106431 RefSeq:NP_001089735.1 UniGene:Xl.82232
ProteinModelPortal:Q3B8H4 SMR:Q3B8H4 GeneID:734798 KEGG:xla:734798
Uniprot:Q3B8H4
Length = 156
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 10 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 69
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 129
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 130 FL-KNNMILCQMDYE 143
>MGI|MGI:102812 [details] [associations]
symbol:Lmo1 "LIM domain only 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:102812
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0000122 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K CTD:4004
eggNOG:NOG288849 OMA:GSFETQV EMBL:AJ296304 EMBL:BC053074
IPI:IPI00410856 RefSeq:NP_476514.1 UniGene:Mm.360145
ProteinModelPortal:Q924W9 SMR:Q924W9 STRING:Q924W9
PhosphoSite:Q924W9 PRIDE:Q924W9 Ensembl:ENSMUST00000036992
GeneID:109594 KEGG:mmu:109594 InParanoid:Q924W9 NextBio:362409
Bgee:Q924W9 CleanEx:MM_LMO1 Genevestigator:Q924W9
GermOnline:ENSMUSG00000036111 Uniprot:Q924W9
Length = 156
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 10 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 69
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 129
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 130 FL-KNNMILCQVDYE 143
>UNIPROTKB|Q0P5B3 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:BC120273 IPI:IPI00699115 RefSeq:NP_001069363.1
ProteinModelPortal:Q0P5B3 SMR:Q0P5B3 STRING:Q0P5B3
Ensembl:ENSBTAT00000045558 GeneID:527152 KEGG:bta:527152 CTD:4004
eggNOG:NOG288849 InParanoid:Q0P5B3 OMA:GSFETQV NextBio:20874528
Uniprot:Q0P5B3
Length = 156
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 10 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDQYWHEDCLKCACCDCRLGEVGSTLYTKA 69
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 129
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 130 FL-KNNMILCQMDYE 143
>UNIPROTKB|E9PK83 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 EMBL:AC091013 HGNC:HGNC:6641 ChiTaRS:LMO1
IPI:IPI00979256 ProteinModelPortal:E9PK83 SMR:E9PK83
Ensembl:ENST00000534484 ArrayExpress:E9PK83 Bgee:E9PK83
Uniprot:E9PK83
Length = 145
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 50/121 (41%), Positives = 74/121 (61%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFKRFG 129
C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ + FG
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 130 T--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
T CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F+L ++ ++C+ DY
Sbjct: 73 TTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQMDY 131
Query: 188 E 188
E
Sbjct: 132 E 132
>UNIPROTKB|A9ED79 [details] [associations]
symbol:LMO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670 HOVERGEN:HBG054231
CTD:4004 OMA:GSFETQV EMBL:FP340194 EMBL:AB304399
RefSeq:NP_001106526.1 SMR:A9ED79 Ensembl:ENSSSCT00000022371
GeneID:100127356 KEGG:ssc:100127356 Uniprot:A9ED79
Length = 156
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 54/135 (40%), Positives = 81/135 (60%)
Query: 65 MPIASI-PK-----CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARN 115
+P+ S+ PK C GC I DR++LK L++ WH CLKC C L E + +
Sbjct: 10 VPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 69
Query: 116 GLLFCKEDFFKRFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
L+ C+ D+ + FGT CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 NLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKF 129
Query: 174 YLMEDRKLVCKPDYE 188
+L ++ ++C+ DYE
Sbjct: 130 FL-KNNMILCQLDYE 143
>UNIPROTKB|F1P3H6 [details] [associations]
symbol:F1P3H6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007498 "mesoderm
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021978 "telencephalon
regionalization" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:CNENDAE EMBL:AADN02026343
EMBL:AADN02026344 EMBL:AADN02026345 IPI:IPI00597964
Ensembl:ENSGALT00000034919 Uniprot:F1P3H6
Length = 413
Score = 191 (72.3 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 42/109 (38%), Positives = 61/109 (55%)
Query: 91 RTWHAR---CL--KCHE-CGAPLAEKCF----ARNGLLFCKEDFFKRFGT-KCAGCEMGI 139
R+W + C+ KCH C + C A GL+ +F++RF +CA C +GI
Sbjct: 77 RSWLLKLHQCVTSKCHVFCFCLFSRSCVCATVAVGGLIVIHLEFYRRFSVQRCARCHLGI 136
Query: 140 PPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
+++V RA+DLVYHLNCF C C + L TGD F M+D + C+ +E
Sbjct: 137 SASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFG-MKDNLVYCRLHFE 184
Score = 134 (52.2 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 187 YEAAKA---KDGNCLDGDQ--PN----KRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + DG+ LD DQ P+ KR RT+ QL T+K + + P +QL
Sbjct: 247 YNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 306
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 307 AQKTGLTKRVLQVWFQNARAKFRR 330
>UNIPROTKB|I3LHP5 [details] [associations]
symbol:LIMK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051444 "negative regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0032233 "positive regulation of actin
filament bundle assembly" evidence=IEA] [GO:0031072 "heat shock
protein binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
GO:GO:0032233 OMA:CFRCCEC EMBL:FP340186 Ensembl:ENSSSCT00000025955
Uniprot:I3LHP5
Length = 638
Score = 249 (92.7 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 45/116 (38%), Positives = 64/116 (55%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKR 127
+ +P C CG I D L+ L WHA C +C EC A L+ + + ++G LFCK+D++ R
Sbjct: 11 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 70
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+G C GC I +V A +L YH CF C+ C + GD + L+E KL C
Sbjct: 71 YGESCHGCSEHITKG-LVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYC 125
Score = 48 (22.0 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP + LETL+M
Sbjct: 566 CPPSFFPITVR---CCDLD-PEKRPSFVKLEQWLETLRM 600
>MGI|MGI:104572 [details] [associations]
symbol:Limk1 "LIM-domain containing, protein kinase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005925 "focal
adhesion" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0031072 "heat shock
protein binding" evidence=ISO] [GO:0032233 "positive regulation of
actin filament bundle assembly" evidence=ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0044295 "axonal growth cone"
evidence=ISO] [GO:0045773 "positive regulation of axon extension"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0051444 "negative regulation of ubiquitin-protein ligase
activity" evidence=ISO] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 MGI:MGI:104572 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270 GO:GO:0043005
BRENDA:2.7.11.1 GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
EMBL:AF139987 KO:K05743 GO:GO:0032233 CTD:3984 HOGENOM:HOG000013121
HOVERGEN:HBG052328 OrthoDB:EOG41C6VP EMBL:X86569 EMBL:U15159
EMBL:AF289665 EMBL:U14166 IPI:IPI00133642 PIR:I48737
RefSeq:NP_034847.1 UniGene:Mm.15409 ProteinModelPortal:P53668
SMR:P53668 MINT:MINT-247675 STRING:P53668 PhosphoSite:P53668
PRIDE:P53668 Ensembl:ENSMUST00000015137 GeneID:16885 KEGG:mmu:16885
UCSC:uc008zwt.1 InParanoid:P53668 OMA:CFRCCEC ChiTaRS:LIMK1
NextBio:290892 Bgee:P53668 CleanEx:MM_LIMK1 Genevestigator:P53668
GermOnline:ENSMUSG00000029674 Uniprot:P53668
Length = 647
Score = 247 (92.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 45/120 (37%), Positives = 64/120 (53%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKR 127
+ +P C CG I D L+ L WHA C +C EC L+ + + ++G LFCK+D++ R
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYWAR 79
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
+G C GC I +V A +L YH CF C+ C + GD + L+E KL C Y
Sbjct: 80 YGESCHGCSEHITKG-LVMVAGELKYHPECFICLACGNFIGDGDTYTLVEHSKLYCGQCY 138
Score = 48 (22.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP + LETL+M
Sbjct: 575 CPPSFFPITVR---CCDLD-PEKRPSFVKLEQWLETLRM 609
>UNIPROTKB|F1NVM7 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9031 "Gallus
gallus" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0031072 "heat shock protein binding"
evidence=IEA] [GO:0032233 "positive regulation of actin filament
bundle assembly" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051444 "negative regulation of ubiquitin-protein
ligase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 SUPFAM:SSF50156
GO:GO:0051444 GeneTree:ENSGT00530000063025 GO:GO:0032233
IPI:IPI00573215 OMA:CFRCCEC EMBL:AADN02026078 EMBL:AADN02026079
Ensembl:ENSGALT00000001611 ArrayExpress:F1NVM7 Uniprot:F1NVM7
Length = 648
Score = 247 (92.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 47/119 (39%), Positives = 67/119 (56%)
Query: 66 PIAS-IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
PI + +P C CG I D L+ L WHA C +C ECGA L+ + + ++G L+CK+D+
Sbjct: 4 PIGTDLPVCASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDY 63
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ RFG C GC I +V A + YH CF+C+ C + GD + L+E KL C
Sbjct: 64 WARFGELCHGCAEQITKG-LVMVAGEQKYHPECFSCLNCRAFIGDGDTYALVERSKLYC 121
Score = 48 (22.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 197 CLDGDQPNKRPRTTITAKQLETLKM 221
C D D P KRP + + LETL+M
Sbjct: 579 CCDLD-PEKRPSFSKLEQWLETLRM 602
>UNIPROTKB|E9PC47 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9606 "Homo
sapiens" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR001478 InterPro:IPR001781
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023
PROSITE:PS50106 SMART:SM00132 SMART:SM00228 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 GO:GO:0004672 Gene3D:2.10.110.10 SUPFAM:SSF50156
EMBL:AC005056 EMBL:AC005057 HGNC:HGNC:6613 OMA:CFRCCEC
IPI:IPI00924775 ProteinModelPortal:E9PC47 SMR:E9PC47 PRIDE:E9PC47
Ensembl:ENST00000418310 ArrayExpress:E9PC47 Bgee:E9PC47
Uniprot:E9PC47
Length = 677
Score = 249 (92.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 45/118 (38%), Positives = 65/118 (55%)
Query: 66 PIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFF 125
P + +P C CG I D L+ L WHA C +C +C A L+ + + ++G LFCK+D++
Sbjct: 48 PGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW 107
Query: 126 KRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
R+G C GC I +V A +L YH CF C+ C + GD + L+E KL C
Sbjct: 108 ARYGESCHGCSEQITKG-LVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYC 164
Score = 46 (21.3 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP LETL+M
Sbjct: 605 CPPSFFPITVR---CCDLD-PEKRPSFVKLEHWLETLRM 639
>UNIPROTKB|E1BC64 [details] [associations]
symbol:LIMK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051444 "negative regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0032233 "positive regulation of actin
filament bundle assembly" evidence=IEA] [GO:0031072 "heat shock
protein binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
KO:K05743 GO:GO:0032233 CTD:3984 OMA:CFRCCEC EMBL:DAAA02058194
IPI:IPI01001191 RefSeq:NP_001193833.1 UniGene:Bt.62771
Ensembl:ENSBTAT00000061497 GeneID:535225 KEGG:bta:535225
NextBio:20876666 Uniprot:E1BC64
Length = 647
Score = 249 (92.7 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 45/116 (38%), Positives = 64/116 (55%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKR 127
+ +P C CG I D L+ L WHA C +C EC A L+ + + ++G LFCK+D++ R
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYWAR 79
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+G C GC I +V A +L YH CF C+ C + GD + L+E KL C
Sbjct: 80 YGESCHGCSEHITKG-LVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYC 134
Score = 45 (20.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP + LETL M
Sbjct: 575 CPPSFFPITVR---CCDLD-PEKRPSFVKLEQWLETLHM 609
>UNIPROTKB|F1NXY2 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9031 "Gallus
gallus" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR001478 InterPro:IPR001781
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023
PROSITE:PS50106 SMART:SM00132 SMART:SM00228 GO:GO:0005524
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0004672
Gene3D:2.10.110.10 SUPFAM:SSF50156 GeneTree:ENSGT00530000063025
EMBL:AADN02026078 EMBL:AADN02026079 IPI:IPI00819181
Ensembl:ENSGALT00000040584 ArrayExpress:F1NXY2 Uniprot:F1NXY2
Length = 643
Score = 244 (91.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 45/114 (39%), Positives = 64/114 (56%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
+P C CG I D L+ L WHA C +C ECGA L+ + + ++G L+CK+D++ RFG
Sbjct: 4 LPVCASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDYWARFG 63
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
C GC I +V A + YH CF+C+ C + GD + L+E KL C
Sbjct: 64 ELCHGCAEQITKG-LVMVAGEQKYHPECFSCLNCRAFIGDGDTYALVERSKLYC 116
Score = 48 (22.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 197 CLDGDQPNKRPRTTITAKQLETLKM 221
C D D P KRP + + LETL+M
Sbjct: 574 CCDLD-PEKRPSFSKLEQWLETLRM 597
>UNIPROTKB|P53667 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045773 "positive regulation of axon extension" evidence=ISS]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0030036 "actin
cytoskeleton organization" evidence=TAS] [GO:0007399 "nervous
system development" evidence=TAS] [GO:0004672 "protein kinase
activity" evidence=NAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0007266 "Rho protein signal transduction"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0004674 "protein serine/threonine
kinase activity" evidence=TAS] [GO:0031072 "heat shock protein
binding" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IDA] [GO:0032233 "positive regulation of actin filament
bundle assembly" evidence=IDA] [GO:0051444 "negative regulation of
ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0046872
GO:GO:0030036 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0008270 GO:GO:0043005 Pathway_Interaction_DB:caspase_pathway
BRENDA:2.7.11.1 GO:GO:0005925 Reactome:REACT_127416
Gene3D:2.10.110.10 GO:GO:0007266 GO:GO:0045773 SUPFAM:SSF50156
GO:GO:0051444 EMBL:CH471200 Orphanet:904 GO:GO:0031072
EMBL:AC005056 EMBL:U63721 KO:K05743 GO:GO:0032233 CTD:3984
HOGENOM:HOG000013121 HOVERGEN:HBG052328 EMBL:D26309 EMBL:U62293
EMBL:AF134379 EMBL:AK300382 EMBL:AC005057 IPI:IPI00216433
IPI:IPI00216434 IPI:IPI00291702 PIR:JP0078 RefSeq:NP_001191355.1
RefSeq:NP_002305.1 UniGene:Hs.647035 PDB:3S95 PDBsum:3S95
ProteinModelPortal:P53667 SMR:P53667 DIP:DIP-31605N IntAct:P53667
MINT:MINT-2833166 STRING:P53667 PhosphoSite:P53667 DMDM:90185240
PaxDb:P53667 PRIDE:P53667 DNASU:3984 Ensembl:ENST00000336180
Ensembl:ENST00000419043 Ensembl:ENST00000435201
Ensembl:ENST00000538333 Ensembl:ENST00000570926
Ensembl:ENST00000571928 Ensembl:ENST00000572388
Ensembl:ENST00000576167 GeneID:3984 KEGG:hsa:3984 UCSC:uc003uaa.2
GeneCards:GC07P073497 HGNC:HGNC:6613 HPA:HPA028064 HPA:HPA028516
MIM:601329 neXtProt:NX_P53667 PharmGKB:PA30386 InParanoid:P53667
PhylomeDB:P53667 BindingDB:P53667 ChEMBL:CHEMBL3836
EvolutionaryTrace:P53667 GenomeRNAi:3984 NextBio:15626
ArrayExpress:P53667 Bgee:P53667 CleanEx:HS_LIMK1
Genevestigator:P53667 GermOnline:ENSG00000106683 Uniprot:P53667
Length = 647
Score = 246 (91.7 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 44/116 (37%), Positives = 64/116 (55%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKR 127
+ +P C CG I D L+ L WHA C +C +C A L+ + + ++G LFCK+D++ R
Sbjct: 20 SELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWAR 79
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+G C GC I +V A +L YH CF C+ C + GD + L+E KL C
Sbjct: 80 YGESCHGCSEQITKG-LVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYC 134
Score = 46 (21.3 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP LETL+M
Sbjct: 575 CPPSFFPITVR---CCDLD-PEKRPSFVKLEHWLETLRM 609
>UNIPROTKB|Q8QFP8 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] Pfam:PF00595
Pfam:PF00412 InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR001478 InterPro:IPR001781 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0008270 GO:GO:0030426 Gene3D:2.10.110.10 SUPFAM:SSF50156
KO:K05743 EMBL:AB073752 IPI:IPI00573215 RefSeq:NP_989462.1
UniGene:Gga.3 ProteinModelPortal:Q8QFP8 STRING:Q8QFP8 GeneID:373922
KEGG:gga:373922 CTD:3984 HOGENOM:HOG000013121 HOVERGEN:HBG052328
InParanoid:Q8QFP8 OrthoDB:EOG41C6VP NextBio:20813454 Uniprot:Q8QFP8
Length = 662
Score = 244 (91.0 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 45/114 (39%), Positives = 64/114 (56%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
+P C CG I D L+ L WHA C +C ECGA L+ + + ++G L+CK+D++ RFG
Sbjct: 23 LPVCASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDYWARFG 82
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
C GC I +V A + YH CF+C+ C + GD + L+E KL C
Sbjct: 83 ELCHGCAEQITKG-LVMVAGEQKYHPECFSCLNCRAFIGDGDTYALVERSKLYC 135
Score = 48 (22.0 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 197 CLDGDQPNKRPRTTITAKQLETLKM 221
C D D P KRP + + LETL+M
Sbjct: 593 CCDLD-PEKRPSFSKLEQWLETLRM 616
>UNIPROTKB|E1BXQ7 [details] [associations]
symbol:E1BXQ7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 EMBL:AADN02026343 EMBL:AADN02026344
EMBL:AADN02026345 IPI:IPI00684197 Ensembl:ENSGALT00000001693
Uniprot:E1BXQ7
Length = 395
Score = 179 (68.1 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 38/92 (41%), Positives = 51/92 (55%)
Query: 100 CHECGAPLAEKCFARNGL--LFCKEDFFKRFGT-KCAGCEMGIPPTQVVRRAQDLVYHLN 156
C C P C + L LFC+ RF +CA C +GI +++V RA+DLVYHLN
Sbjct: 81 CRLCAVPSPAGCASHRLLWPLFCR-----RFSVQRCARCHLGISASEMVMRARDLVYHLN 135
Query: 157 CFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
CF C C + L TGD F M+D + C+ +E
Sbjct: 136 CFTCTTCNKMLTTGDHFG-MKDNLVYCRLHFE 166
Score = 134 (52.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 187 YEAAKA---KDGNCLDGDQ--PN----KRPRTTITAKQLETLKMAYNTSPKPARHVREQL 237
Y AA + DG+ LD DQ P+ KR RT+ QL T+K + + P +QL
Sbjct: 229 YNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQL 288
Query: 238 SQDTGLDMRVVQVWFQNRRAKEKR 261
+Q TGL RV+QVWFQN RAK +R
Sbjct: 289 AQKTGLTKRVLQVWFQNARAKFRR 312
>UNIPROTKB|Q6PVU4 [details] [associations]
symbol:Q6PVU4 "Lim1" species:9986 "Oryctolagus cuniculus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 HSSP:P10037
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY575212 UniGene:Ocu.3134
ProteinModelPortal:Q6PVU4 Uniprot:Q6PVU4
Length = 348
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 56/100 (56%), Positives = 71/100 (71%)
Query: 186 DYEAAKA--KDGNCLDGDQPN---KR--PRTTITAKQLETLKMAYNTSPKPARHVREQLS 238
D E+A K+G + D N KR PRTTI AKQLETLK A+ +PKP RH+REQL+
Sbjct: 97 DSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 156
Query: 239 QDTGLDMRVVQVWFQNRRAKEKRLKK-DAGRTRWSQYFRS 277
Q+TGL+MRV+QVWFQNRR+KE+R+K+ A R +FRS
Sbjct: 157 QETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRS 196
Score = 229 (85.7 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 41/85 (48%), Positives = 58/85 (68%)
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
FGTKCAGC GI P+ +VRRA+ V+HLNCF C+MC +QL+TG+E Y++++ K VCK DY
Sbjct: 1 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 60
Query: 188 --EAAKAKDGN---CLDGDQPNKRP 207
++ AK+ + G P+ P
Sbjct: 61 LSNSSVAKENSLHSATTGSDPSLSP 85
>RGD|62055 [details] [associations]
symbol:Limk1 "LIM domain kinase 1" species:10116 "Rattus
norvegicus" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005925 "focal
adhesion" evidence=IEA;ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031072 "heat shock protein binding" evidence=IEA;ISO]
[GO:0032233 "positive regulation of actin filament bundle assembly"
evidence=IEA;ISO] [GO:0043005 "neuron projection"
evidence=IEA;ISO;ISS] [GO:0044295 "axonal growth cone" evidence=IDA]
[GO:0045773 "positive regulation of axon extension"
evidence=IEA;ISO;ISS] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051444 "negative regulation of
ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 RGD:62055 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270 BRENDA:2.7.11.1
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0045773 SUPFAM:SSF50156
GO:GO:0044295 GO:GO:0051444 GO:GO:0032233 HOGENOM:HOG000013121
HOVERGEN:HBG052328 OrthoDB:EOG41C6VP EMBL:D31873 IPI:IPI00211975
PIR:I58353 UniGene:Rn.11250 ProteinModelPortal:P53669 STRING:P53669
PhosphoSite:P53669 PRIDE:P53669 UCSC:RGD:62055 InParanoid:P53669
ArrayExpress:P53669 Genevestigator:P53669
GermOnline:ENSRNOG00000001470 Uniprot:P53669
Length = 647
Score = 237 (88.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 43/120 (35%), Positives = 62/120 (51%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKR 127
+ +P C C I D L+ L WHA C +C EC L+ + + ++G LFCK+D++ R
Sbjct: 20 SELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKKDYWAR 79
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
+G C GC I +V +L YH CF C+ C + GD + L+E KL C Y
Sbjct: 80 YGESCHGCSEHITKG-LVMVGGELKYHPECFICLACGNFIGDGDTYTLVEHSKLYCGQCY 138
Score = 48 (22.0 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP + LETL+M
Sbjct: 575 CPPSFFPITVR---CCDLD-PEKRPSFVKLEQWLETLRM 609
>UNIPROTKB|P53669 [details] [associations]
symbol:Limk1 "LIM domain kinase 1" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR001478 InterPro:IPR001781 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023
PROSITE:PS50106 SMART:SM00132 SMART:SM00228 RGD:62055 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270
BRENDA:2.7.11.1 GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0044295 GO:GO:0051444 GO:GO:0032233
HOGENOM:HOG000013121 HOVERGEN:HBG052328 OrthoDB:EOG41C6VP
EMBL:D31873 IPI:IPI00211975 PIR:I58353 UniGene:Rn.11250
ProteinModelPortal:P53669 STRING:P53669 PhosphoSite:P53669
PRIDE:P53669 UCSC:RGD:62055 InParanoid:P53669 ArrayExpress:P53669
Genevestigator:P53669 GermOnline:ENSRNOG00000001470 Uniprot:P53669
Length = 647
Score = 237 (88.5 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 43/120 (35%), Positives = 62/120 (51%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKR 127
+ +P C C I D L+ L WHA C +C EC L+ + + ++G LFCK+D++ R
Sbjct: 20 SELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKKDYWAR 79
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
+G C GC I +V +L YH CF C+ C + GD + L+E KL C Y
Sbjct: 80 YGESCHGCSEHITKG-LVMVGGELKYHPECFICLACGNFIGDGDTYTLVEHSKLYCGQCY 138
Score = 48 (22.0 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP + LETL+M
Sbjct: 575 CPPSFFPITVR---CCDLD-PEKRPSFVKLEQWLETLRM 609
>ZFIN|ZDB-GENE-980526-419 [details] [associations]
symbol:lmo2 "LIM domain only 2 (rhombotin-like 1)"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0030218 "erythrocyte
differentiation" evidence=IGI] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-980526-419 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0030218 GeneTree:ENSGT00680000099670
GO:GO:0035162 HSSP:P25801 GO:GO:0061304 HOGENOM:HOG000232175
HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108 KO:K15612 OMA:CEKRIRA
OrthoDB:EOG4001KG EMBL:AF191560 EMBL:CT025900 EMBL:BC093136
IPI:IPI00500159 RefSeq:NP_571186.1 UniGene:Dr.79808
ProteinModelPortal:Q9PTJ3 SMR:Q9PTJ3 STRING:Q9PTJ3
Ensembl:ENSDART00000134247 GeneID:30332 KEGG:dre:30332
InParanoid:Q567L0 NextBio:20806764 Bgee:Q9PTJ3 Uniprot:Q9PTJ3
Length = 159
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 52/133 (39%), Positives = 70/133 (52%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCK 121
MP S+ CGGC I DRF LK +E+ WH CL C CG L E + + + G C+
Sbjct: 23 MP-PSLLTCGGCQQSIGDRFFLKAIEQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCR 81
Query: 122 EDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDR 179
D+ + FG CA CE I ++ R +D VYHL CF C C + GD YL+ +
Sbjct: 82 RDYLRLFGQDGLCASCEKRIRAFEMTMRVRDKVYHLECFKCAACQKHFCVGDR-YLLINS 140
Query: 180 KLVCKPD-YEAAK 191
+VC+ D +E K
Sbjct: 141 DIVCEQDIFEWTK 153
>UNIPROTKB|E2RQT0 [details] [associations]
symbol:LIMK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051444 "negative regulation of
ubiquitin-protein ligase activity" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045773
"positive regulation of axon extension" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0032233 "positive regulation
of actin filament bundle assembly" evidence=IEA] [GO:0031072 "heat
shock protein binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
KO:K05743 GO:GO:0032233 CTD:3984 OMA:CFRCCEC EMBL:AAEX03004238
RefSeq:XP_849646.1 ProteinModelPortal:E2RQT0
Ensembl:ENSCAFT00000019799 GeneID:489800 KEGG:cfa:489800
NextBio:20862921 Uniprot:E2RQT0
Length = 647
Score = 234 (87.4 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 44/116 (37%), Positives = 61/116 (52%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKR 127
+ +P C CG I D L+ L WHA C + EC A L+ + ++G LFCK D++ R
Sbjct: 20 SELPMCASCGQRIYDGQYLQALNADWHADCFRGCECNASLSHPYYQKDGQLFCKRDYWAR 79
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+G C GC I +V A +L YH CF C+ C + GD + L+E KL C
Sbjct: 80 YGEACHGCSEHITKG-LVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYC 134
Score = 47 (21.6 bits), Expect = 3.9e-21, Sum P(2) = 3.9e-21
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 183 CKPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKM 221
C P + + C D D P KRP + LETL+M
Sbjct: 575 CPPSFFPITVR---CCDLD-PEKRPSFMKLEQWLETLRM 609
>ZFIN|ZDB-GENE-061212-3 [details] [associations]
symbol:limk1a "LIM domain kinase 1a" species:7955
"Danio rerio" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595
Pfam:PF00412 InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR001478 InterPro:IPR001781 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 ZFIN:ZDB-GENE-061212-3 GO:GO:0005524
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0004672
Gene3D:2.10.110.10 SUPFAM:SSF50156 KO:K05743 HOVERGEN:HBG052328
EMBL:DQ679229 IPI:IPI00782816 RefSeq:NP_001036156.1
UniGene:Dr.103272 ProteinModelPortal:Q0PWB7 STRING:Q0PWB7
GeneID:735292 KEGG:dre:735292 CTD:735292 InParanoid:Q0PWB7
NextBio:20902662 Uniprot:Q0PWB7
Length = 648
Score = 238 (88.8 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 43/112 (38%), Positives = 63/112 (56%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFG 129
+P C GCG I D L+ L WH C +C ECG+ L+ + ++G LFCK+D++ +FG
Sbjct: 24 LPVCSGCGQQIYDDQYLQALSSDWHTLCCRCCECGSSLSHWYYEKDGRLFCKKDYWAKFG 83
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKL 181
C GC I T ++ A + YH CF+C+ C + GD + L+E KL
Sbjct: 84 ELCHGCSEPIS-TGLIMVAGEQKYHPECFSCLSCGAFIGDGDTYALVERSKL 134
Score = 40 (19.1 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 12/25 (48%), Positives = 12/25 (48%)
Query: 197 CLDGDQPNKRPRTTITAKQLETLKM 221
C D D KRP T LE LKM
Sbjct: 585 CCDLDA-EKRPAFTKLESWLEDLKM 608
>UNIPROTKB|E1BWH2 [details] [associations]
symbol:E1BWH2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001102 "RNA polymerase
II activating transcription factor binding" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0003139 "secondary heart field specification"
evidence=IEA] [GO:0003148 "outflow tract septum morphogenesis"
evidence=IEA] [GO:0003203 "endocardial cushion morphogenesis"
evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0021524 "visceral motor neuron differentiation"
evidence=IEA] [GO:0021559 "trigeminal nerve development"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0032725 "positive regulation of granulocyte macrophage
colony-stimulating factor production" evidence=IEA] [GO:0032729
"positive regulation of interferon-gamma production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032731 "positive regulation of interleukin-1
beta production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IEA] [GO:0048880 "sensory system development"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0050728 "negative regulation of
inflammatory response" evidence=IEA] [GO:0055010 "ventricular
cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0060379 "cardiac
muscle cell myoblast differentiation" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060413 "atrial septum
morphogenesis" evidence=IEA] [GO:0060913 "cardiac cell fate
determination" evidence=IEA] [GO:0071657 "positive regulation of
granulocyte colony-stimulating factor production" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0043524
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0090090 GO:GO:0001105
GO:GO:0001158 GO:GO:0042517 GeneTree:ENSGT00700000104050
GO:GO:0043388 GO:GO:0003266 IPI:IPI00598855 OMA:TDMGDMG
EMBL:AADN02072754 EMBL:AADN02072755 EMBL:AADN02072756
EMBL:AADN02072757 EMBL:AADN02072758 Ensembl:ENSGALT00000038907
ArrayExpress:E1BWH2 Uniprot:E1BWH2
Length = 339
Score = 154 (59.3 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 70 IPK-CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFF 125
IP C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+
Sbjct: 13 IPSLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 126 KRFGTK 131
++ T+
Sbjct: 73 RKINTR 78
Score = 153 (58.9 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 202 QPNK--RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 259
QP K R RT + KQL TL+ Y +P+P ++EQL + TGL RV++VWFQN+R K+
Sbjct: 167 QPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 226
Query: 260 KR 261
K+
Sbjct: 227 KK 228
Score = 83 (34.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
C GC I ++R + DL +H C C C + L+ ++ D K CK DY
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFV-RDGKTYCKRDY 71
>UNIPROTKB|F5H3S4 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC007529
EMBL:AC007552 HGNC:HGNC:6643 IPI:IPI01011541 SMR:F5H3S4
Ensembl:ENST00000537757 Ensembl:ENST00000539534
Ensembl:ENST00000546281 Uniprot:F5H3S4
Length = 118
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 46/109 (42%), Positives = 64/109 (58%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEF 173
FG CA C IP ++V RA+D VYHL+CFAC +C ++ GD+F
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKF 118
>UNIPROTKB|Q1LZ94 [details] [associations]
symbol:LMO2 "Rhombotin-2" species:9913 "Bos taurus"
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0048037
"cofactor binding" evidence=IEA] [GO:0045647 "negative regulation
of erythrocyte differentiation" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GeneTree:ENSGT00680000099670
GO:GO:0000977 GO:GO:0042789 GO:GO:0070888 GO:GO:0035162
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 HOGENOM:HOG000232175
HOVERGEN:HBG054231 EMBL:BC116134 IPI:IPI00688250
RefSeq:NP_001069820.1 UniGene:Bt.17081 ProteinModelPortal:Q1LZ94
SMR:Q1LZ94 STRING:Q1LZ94 PRIDE:Q1LZ94 Ensembl:ENSBTAT00000009126
GeneID:614876 KEGG:bta:614876 CTD:4005 eggNOG:NOG319108
InParanoid:Q1LZ94 KO:K15612 OMA:CEKRIRA OrthoDB:EOG4001KG
NextBio:20899332 Uniprot:Q1LZ94
Length = 158
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/133 (37%), Positives = 70/133 (52%)
Query: 65 MPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCK 121
MP S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+
Sbjct: 23 MP-PSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCR 81
Query: 122 EDFFKRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDR 179
D+ + FG CA C+ I ++ R +D VYHL CF C C + GD YL+ +
Sbjct: 82 RDYLRLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINS 140
Query: 180 KLVCKPD-YEAAK 191
+VC+ D YE K
Sbjct: 141 DIVCEQDIYEWTK 153
>UNIPROTKB|Q5M8V8 [details] [associations]
symbol:lmo2 "Rhombotin-2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0005634 "nucleus" evidence=ISS] [GO:0030218
"erythrocyte differentiation" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030218
GO:GO:0001568 GeneTree:ENSGT00680000099670 GO:GO:0035162
HSSP:P25801 HOGENOM:HOG000232175 HOVERGEN:HBG054231 CTD:4005
eggNOG:NOG319108 KO:K15612 OrthoDB:EOG4001KG EMBL:BC087809
RefSeq:NP_001011238.1 UniGene:Str.14577 ProteinModelPortal:Q5M8V8
SMR:Q5M8V8 STRING:Q5M8V8 Ensembl:ENSXETT00000008646 GeneID:496679
KEGG:xtr:496679 Xenbase:XB-GENE-479144 InParanoid:Q5M8V8
OMA:TKLNEMM Bgee:Q5M8V8 Uniprot:Q5M8V8
Length = 158
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 48/132 (36%), Positives = 69/132 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 26 SLLTCGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 85
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 86 RLFGQDGLCASCDKRIRAFEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 144
Query: 184 KPD-YEAAKAKD 194
+ D YE K +
Sbjct: 145 EQDIYEWTKLNE 156
>UNIPROTKB|Q90XH3 [details] [associations]
symbol:lmo2 "Rhombotin-2" species:8355 "Xenopus laevis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0030218 "erythrocyte
differentiation" evidence=IGI] [GO:0003677 "DNA binding"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030218 HSSP:P25801
HOVERGEN:HBG054231 CTD:4005 KO:K15612 EMBL:AF374473 EMBL:BC097502
RefSeq:NP_001081112.1 UniGene:Xl.9549 ProteinModelPortal:Q90XH3
SMR:Q90XH3 GeneID:394388 KEGG:xla:394388 Xenbase:XB-GENE-6254426
Uniprot:Q90XH3
Length = 158
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 48/132 (36%), Positives = 69/132 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 26 SLLTCGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 85
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 86 RLFGQDGLCASCDNRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 144
Query: 184 KPD-YEAAKAKD 194
+ D YE K +
Sbjct: 145 EQDIYEWTKLSE 156
>UNIPROTKB|F1NU72 [details] [associations]
symbol:LMO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0048037 "cofactor binding" evidence=IEA]
[GO:0070888 "E-box binding" evidence=IEA] [GO:0097067 "cellular
response to thyroid hormone stimulus" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0048037 GO:GO:0001190
GeneTree:ENSGT00680000099670 GO:GO:0000977 GO:GO:0042789
GO:GO:0070888 GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 OMA:CEKRIRA
EMBL:AADN02073657 IPI:IPI00575087 Ensembl:ENSGALT00000000471
ArrayExpress:F1NU72 Uniprot:F1NU72
Length = 144
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 12 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 71
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 72 RLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 130
Query: 184 KPD-YEAAK 191
+ D YE K
Sbjct: 131 EQDIYEWTK 139
>UNIPROTKB|F1PKL3 [details] [associations]
symbol:LMO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:CEKRIRA EMBL:AAEX03011393
EMBL:AAEX03011391 EMBL:AAEX03011392 EMBL:AAEX03011394
EMBL:AAEX03011395 Ensembl:ENSCAFT00000011428 Uniprot:F1PKL3
Length = 223
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 91 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 150
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 151 RLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 209
Query: 184 KPD-YEAAK 191
+ D YE K
Sbjct: 210 EQDIYEWTK 218
>UNIPROTKB|P25791 [details] [associations]
symbol:LMO2 "Rhombotin-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IEA] [GO:0097067 "cellular response to
thyroid hormone stimulus" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070888 "E-box binding" evidence=IDA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0043425 "bHLH transcription factor
binding" evidence=IPI] [GO:0048037 "cofactor binding" evidence=IPI]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IDA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007275 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GO:GO:0000977 GO:GO:0042789
GO:GO:0070888 GO:GO:0035162 GO:GO:0097067 GO:GO:0045647
GO:GO:0001228 PDB:2XJY PDB:2XJZ PDBsum:2XJY PDBsum:2XJZ
HOGENOM:HOG000232175 HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108
KO:K15612 OMA:CEKRIRA OrthoDB:EOG4001KG EMBL:X61118 EMBL:BC034041
EMBL:BC035607 EMBL:BC042426 EMBL:BC073973 EMBL:AF257211
IPI:IPI00016852 IPI:IPI00915342 IPI:IPI00926017 PIR:S29477
RefSeq:NP_001135787.1 RefSeq:NP_001135788.1 RefSeq:NP_005565.2
UniGene:Hs.34560 ProteinModelPortal:P25791 SMR:P25791 IntAct:P25791
MINT:MINT-233526 STRING:P25791 PhosphoSite:P25791 DMDM:132533
PRIDE:P25791 DNASU:4005 Ensembl:ENST00000257818
Ensembl:ENST00000395833 Ensembl:ENST00000411482 GeneID:4005
KEGG:hsa:4005 UCSC:uc001mvc.3 UCSC:uc010rem.2 GeneCards:GC11M033880
H-InvDB:HIX0009544 HGNC:HGNC:6642 HPA:CAB016258 MIM:180385
neXtProt:NX_P25791 PharmGKB:PA30408 InParanoid:P25791
PhylomeDB:P25791 ChiTaRS:LMO2 EvolutionaryTrace:P25791
GenomeRNAi:4005 NextBio:15712 Bgee:P25791 CleanEx:HS_LMO2
Genevestigator:P25791 GermOnline:ENSG00000135363 Uniprot:P25791
Length = 158
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 26 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 85
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 86 RLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 144
Query: 184 KPD-YEAAK 191
+ D YE K
Sbjct: 145 EQDIYEWTK 153
>UNIPROTKB|F1SGS5 [details] [associations]
symbol:LMO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0048037
"cofactor binding" evidence=IEA] [GO:0045647 "negative regulation
of erythrocyte differentiation" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GeneTree:ENSGT00680000099670
GO:GO:0000977 GO:GO:0042789 GO:GO:0070888 GO:GO:0035162
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 OMA:CEKRIRA EMBL:CU463884
ProteinModelPortal:F1SGS5 SMR:F1SGS5 Ensembl:ENSSSCT00000014533
Uniprot:F1SGS5
Length = 158
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 26 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 85
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 86 RLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 144
Query: 184 KPD-YEAAK 191
+ D YE K
Sbjct: 145 EQDIYEWTK 153
>MGI|MGI:102811 [details] [associations]
symbol:Lmo2 "LIM domain only 2" species:10090 "Mus musculus"
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=ISO] [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IGI] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048037 "cofactor
binding" evidence=ISO] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=ISO] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:102811 GO:GO:0005634
GO:GO:0043234 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 Gene3D:2.10.110.10 GO:GO:0035162 GO:GO:0045647
PDB:2L6Y PDB:2L6Z PDBsum:2L6Y PDBsum:2L6Z PDB:1J2O PDB:2LXD
PDBsum:1J2O PDBsum:2LXD HOGENOM:HOG000232175 HOVERGEN:HBG054231
CTD:4005 eggNOG:NOG319108 KO:K15612 OrthoDB:EOG4001KG ChiTaRS:LMO2
EMBL:M64360 EMBL:BC057880 IPI:IPI00114239 PIR:A39370
RefSeq:NP_001135808.1 RefSeq:NP_001135809.1 RefSeq:NP_032531.2
UniGene:Mm.29266 ProteinModelPortal:P25801 SMR:P25801
DIP:DIP-24247N IntAct:P25801 MINT:MINT-2567948 STRING:P25801
PhosphoSite:P25801 PRIDE:P25801 Ensembl:ENSMUST00000123437
Ensembl:ENSMUST00000163256 Ensembl:ENSMUST00000170926 GeneID:16909
KEGG:mmu:16909 InParanoid:P25801 EvolutionaryTrace:P25801
NextBio:290948 Bgee:P25801 CleanEx:MM_LMO2 Genevestigator:P25801
GermOnline:ENSMUSG00000032698 Uniprot:P25801
Length = 158
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 26 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 85
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 86 RLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 144
Query: 184 KPD-YEAAK 191
+ D YE K
Sbjct: 145 EQDIYEWTK 153
>RGD|1307101 [details] [associations]
symbol:Lmo2 "LIM domain only 2" species:10116 "Rattus
norvegicus" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=ISO] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0035162 "embryonic hemopoiesis" evidence=ISO] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO] [GO:0045647 "negative
regulation of erythrocyte differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048037 "cofactor
binding" evidence=ISO] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307101 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0048037 GO:GO:0001190 GO:GO:0000977
GO:GO:0042789 GO:GO:0070888 GO:GO:0035162 EMBL:CH473949
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 HOGENOM:HOG000232175
HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108 KO:K15612 OMA:CEKRIRA
OrthoDB:EOG4001KG IPI:IPI00373656 RefSeq:NP_001032435.2
UniGene:Rn.155591 GeneID:362176 KEGG:rno:362176 NextBio:678912
EMBL:BC105772 RefSeq:NP_001231708.1 RefSeq:NP_001231709.1
RefSeq:NP_001231710.1 SMR:Q3KRD2 STRING:Q3KRD2 UCSC:RGD:1307101
InParanoid:Q3KRD2 Genevestigator:Q3KRD2 Uniprot:Q3KRD2
Length = 158
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 26 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 85
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 86 RLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 144
Query: 184 KPD-YEAAK 191
+ D YE K
Sbjct: 145 EQDIYEWTK 153
>UNIPROTKB|F1LNA1 [details] [associations]
symbol:Lmo2 "Protein Lmo2" species:10116 "Rattus
norvegicus" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001228 "RNA
polymerase II transcription regulatory region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0048037 "cofactor binding" evidence=IEA]
[GO:0070888 "E-box binding" evidence=IEA] [GO:0097067 "cellular
response to thyroid hormone stimulus" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307101 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0048037 GO:GO:0001190
GeneTree:ENSGT00680000099670 GO:GO:0000977 GO:GO:0042789
GO:GO:0070888 GO:GO:0035162 GO:GO:0097067 GO:GO:0045647
GO:GO:0001228 CTD:4005 KO:K15612 IPI:IPI00373656
RefSeq:NP_001032435.2 UniGene:Rn.155591 ProteinModelPortal:F1LNA1
SMR:F1LNA1 Ensembl:ENSRNOT00000012625 GeneID:362176 KEGG:rno:362176
NextBio:678912 ArrayExpress:F1LNA1 Uniprot:F1LNA1
Length = 220
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 69 SIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFF 125
S+ CGGC I DR+ LK +++ WH CL C CG L E + + + G C+ D+
Sbjct: 88 SLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYL 147
Query: 126 KRFGTK--CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ FG CA C+ I ++ R +D VYHL CF C C + GD YL+ + +VC
Sbjct: 148 RLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDR-YLLINSDIVC 206
Query: 184 KPD-YEAAK 191
+ D YE K
Sbjct: 207 EQDIYEWTK 215
>FB|FBgn0032196 [details] [associations]
symbol:CG5708 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
HSSP:P25801 GeneTree:ENSGT00700000104177 eggNOG:NOG314117
EMBL:BT012487 RefSeq:NP_609359.1 RefSeq:NP_723534.1
UniGene:Dm.18161 SMR:Q9VL21 IntAct:Q9VL21 MINT:MINT-885753
STRING:Q9VL21 EnsemblMetazoa:FBtr0079955 EnsemblMetazoa:FBtr0079956
GeneID:34361 KEGG:dme:Dmel_CG5708 UCSC:CG5708-RA
FlyBase:FBgn0032196 InParanoid:Q9VL21 OMA:FMDESSN OrthoDB:EOG4VQ858
GenomeRNAi:34361 NextBio:788118 Uniprot:Q9VL21
Length = 241
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 44/84 (52%), Positives = 55/84 (65%)
Query: 70 IPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
I CGGCGD I DR++L L+R WH CLKCH CGA LAE CF R GL+ CK+D+
Sbjct: 75 IKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSS 134
Query: 127 RFGTK--CAGCEMGIPPTQVVRRA 148
FG C+GC IPP+++V +A
Sbjct: 135 MFGCSGVCSGCGETIPPSELVAKA 158
>UNIPROTKB|F1N959 [details] [associations]
symbol:F1N959 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02072754 EMBL:AADN02072755
EMBL:AADN02072756 EMBL:AADN02072757 EMBL:AADN02072758
IPI:IPI00819883 Ensembl:ENSGALT00000024015 ArrayExpress:F1N959
Uniprot:F1N959
Length = 303
Score = 150 (57.9 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 192 AKDGNCLDGDQPNK--RPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ 249
A G P K R RT + KQL TL+ Y +P+P ++EQL + TGL RV++
Sbjct: 119 AGGGTSAGAPPPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 178
Query: 250 VWFQNRRAKEKR 261
VWFQN+R K+K+
Sbjct: 179 VWFQNKRCKDKK 190
Score = 145 (56.1 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 73 CGGCGDLILDRFILKVL-ERTWHARCLKCHECGAPLAEKC--FARNGLLFCKEDFFKRFG 129
C GCG+ I D++IL+V + WHA CLKC EC L E C F R+G +CK D+ R+
Sbjct: 3 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI-RYA 61
Query: 130 TKC 132
C
Sbjct: 62 ICC 64
Score = 83 (34.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
C GC I ++R + DL +H C C C + L+ ++ D K CK DY
Sbjct: 3 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFV-RDGKTYCKRDY 57
>UNIPROTKB|F5GYZ6 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC007529
EMBL:AC007552 HGNC:HGNC:6643 IPI:IPI01010126
ProteinModelPortal:F5GYZ6 SMR:F5GYZ6 Ensembl:ENST00000546279
ArrayExpress:F5GYZ6 Bgee:F5GYZ6 Uniprot:F5GYZ6
Length = 110
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 43/99 (43%), Positives = 58/99 (58%)
Query: 71 PK-CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAE---KCFARNGLLFCKEDFFK 126
PK C GC I DR++LK L++ WH CLKC C L E + + L+ C+ D+ +
Sbjct: 10 PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
Query: 127 RFGT--KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMC 163
FG CA C IP ++V RA+D VYHL+CFAC +C
Sbjct: 70 LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLC 108
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 186 (70.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 82 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 141
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 142 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 171
Score = 185 (70.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 37/67 (55%), Positives = 43/67 (64%)
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
F KC+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DY
Sbjct: 3 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDY 61
Query: 188 EAAKAKD 194
E K KD
Sbjct: 62 E--KEKD 66
Score = 85 (35.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 72 KCGGCGDLILD-RFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KC GC + I F+++ LE +H C C C L ++ + G L CK D+ K
Sbjct: 6 KCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 63
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 186 (70.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 177 EDRKLVCKPDYEAAKAKDGNCLDGDQPN--KRPRTTITAKQLETLKMAYNTSPKPARHVR 234
ED KP G+ DG P KRPRT +T +Q K ++ S KP R VR
Sbjct: 82 EDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 141
Query: 235 EQLSQDTGLDMRVVQVWFQNRRAKEKRLKK 264
E L+ +TGL +RVVQVWFQN+RAK K+L +
Sbjct: 142 ETLAAETGLSVRVVQVWFQNQRAKMKKLAR 171
Score = 185 (70.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 37/67 (55%), Positives = 43/67 (64%)
Query: 128 FGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY 187
F KC+GC I PT+ V RA + VYHL CF C +C RQL GDEF L E + L+CK DY
Sbjct: 3 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQ-LLCKGDY 61
Query: 188 EAAKAKD 194
E K KD
Sbjct: 62 E--KEKD 66
Score = 85 (35.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 72 KCGGCGDLILD-RFILKVLERTWHARCLKCHECGAPL--AEKCFARNGLLFCKEDFFK 126
KC GC + I F+++ LE +H C C C L ++ + G L CK D+ K
Sbjct: 6 KCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEK 63
>UNIPROTKB|F1NC68 [details] [associations]
symbol:Gga.10869 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030016 "myofibril" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0005634
GO:GO:0007010 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 GO:GO:0045111 GO:GO:0030016
OMA:FRHHYIP EMBL:AADN02015021 EMBL:AADN02015019 EMBL:AADN02015020
IPI:IPI00591829 Ensembl:ENSGALT00000025088 Uniprot:F1NC68
Length = 609
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/183 (31%), Positives = 92/183 (50%)
Query: 66 PIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFF 125
P+ ++ CGGCG I + L L++ WH C KC+ CG L + +++G+ +C+ D+
Sbjct: 142 PVQNLRNCGGCGSEIKNGQSLVALDKHWHLGCFKCNTCGKLLNAEYISKDGIPYCETDYH 201
Query: 126 KRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDR--KLVC 183
+FG +C CE I T V A + YH C CV C + G+E YL VC
Sbjct: 202 AKFGIRCDNCEKYI--TGRVLEAGEKHYHPTCARCVRCCQMFAEGEEMYLQGTSIWHPVC 259
Query: 184 KPDYEAAKAKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGL 243
+ +AAK ++ NK RT+ ++ + ++ A +TS P+R + +L + L
Sbjct: 260 R---QAAKT--------EEKNKETRTS--SESIISVP-ASSTSGSPSRVIYAKLGDEI-L 304
Query: 244 DMR 246
D R
Sbjct: 305 DYR 307
Score = 151 (58.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 66 PIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFCKEDF 124
P ++ C CG +L+V + +H +C C CG LA+ F R G C D+
Sbjct: 13 PSSTAILCNTCGKPCKGE-VLRVQNKYFHIKCFVCKACGCDLAQGGFFVRQGDYICTLDY 71
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
+ +GT+C C+ I +VV A YH +CF C +C GD ++ +C+
Sbjct: 72 QRLYGTRCFSCDEFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPAGDRV-TFNGKECICQ 128
>UNIPROTKB|F1S7Y2 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132
SMART:SM00153 GO:GO:0005634 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 GO:GO:0045111
GO:GO:0030016 OMA:FRHHYIP EMBL:FP003588 Ensembl:ENSSSCT00000009541
Uniprot:F1S7Y2
Length = 689
Score = 219 (82.2 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 58/183 (31%), Positives = 86/183 (46%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 179 CGGCGAEIKNGQSLVALDKHWHLGCFKCKTCGKQLNAEYISKDGLPYCEADYHAKFGIRC 238
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GCE I T V A + YH C CV C R + G+E YL + P +AA+
Sbjct: 239 DGCEKYI--TGHVLEAGEKHYHPLCALCVRCGRMFSEGEEMYLQGSS--IWHPACRQAAR 294
Query: 192 AKDGNCLDGD-----QPNKRP---RTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGL 243
+D N + P P + T T+ + A + S P+R + +L + L
Sbjct: 295 TEDKNKMQNQFSQQVYPGTSPCASQETRTSSESIISVPASSASGSPSRVIYAKLGDEI-L 353
Query: 244 DMR 246
D R
Sbjct: 354 DYR 356
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 66 PIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFCKEDF 124
P +S C CG + +L+V + +H +C C CG LAE F R G C +D+
Sbjct: 43 PPSSAILCNTCGGVCRGE-VLRVQSKYFHIQCFVCKACGCDLAEGGFFVRQGEYICTQDY 101
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
+ +GT+C C+ I +VV A YH +CF C +C GD ++ +C+
Sbjct: 102 QRLYGTRCFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRSPFPPGDRV-TFNGKECMCQ 158
>UNIPROTKB|F1N6Q2 [details] [associations]
symbol:F1N6Q2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132
SMART:SM00153 GO:GO:0005634 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 GO:GO:0045111
GO:GO:0030016 OMA:FRHHYIP EMBL:DAAA02018884 EMBL:DAAA02018885
EMBL:DAAA02018886 EMBL:DAAA02018887 EMBL:DAAA02018888
IPI:IPI00711459 Ensembl:ENSBTAT00000021189 Uniprot:F1N6Q2
Length = 616
Score = 216 (81.1 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 58/183 (31%), Positives = 85/183 (46%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 105 CGGCGAEIKNGQSLVALDKHWHLGCFKCKTCGKQLNAEYISKDGLPYCEADYHTKFGIRC 164
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
CE I T V A + YH C CV C R G+E YL + P +AA+
Sbjct: 165 DSCEKYI--TGHVLEAGEKHYHPLCALCVRCGRMFAEGEEMYLQGSS--IWHPACRQAAR 220
Query: 192 AKDGNCLDGD-----QPNKRP---RTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGL 243
+D N + P P + T T+ + A +TS P+R + +L + L
Sbjct: 221 TEDKNKMQNQASRQASPGATPYACQETRTSSESIISVPASSTSGSPSRVIYAKLGDEI-L 279
Query: 244 DMR 246
D R
Sbjct: 280 DYR 282
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 103 CGAPLAEK-CFARNGLLFCKEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACV 161
CG LAE F R G C +D+ + +GT+C C+ I +VV A YH +CF C
Sbjct: 5 CGCDLAEGGFFVRQGEYICTQDYQRLYGTRCFSCDRFIEG-EVVS-ALGKTYHPDCFVCA 62
Query: 162 MCARQLNTGDEFYLMEDRKLVCK 184
+C GD ++ +C+
Sbjct: 63 VCRSPFPPGDRV-TFNGKECMCQ 84
>UNIPROTKB|P53666 [details] [associations]
symbol:LIMK2 "LIM domain kinase 2" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005801
"cis-Golgi network" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR001478 InterPro:IPR001781
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023
PROSITE:PS50106 SMART:SM00132 SMART:SM00228 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270 BRENDA:2.7.10.2
Gene3D:2.10.110.10 SUPFAM:SSF50156 GO:GO:0005801
GeneTree:ENSGT00530000063025 HOGENOM:HOG000013121
HOVERGEN:HBG052328 CTD:3985 KO:K05744 OrthoDB:EOG4C87RX EMBL:D26310
IPI:IPI00595985 PIR:JP0079 RefSeq:NP_990446.1 UniGene:Gga.3222
ProteinModelPortal:P53666 SMR:P53666 STRING:P53666
Ensembl:ENSGALT00000011263 GeneID:396010 KEGG:gga:396010
InParanoid:P53666 OMA:DARLSPH NextBio:20816073 Uniprot:P53666
Length = 642
Score = 216 (81.1 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 40/119 (33%), Positives = 64/119 (53%)
Query: 66 PIASIPKCGGCGDLIL-DRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDF 124
P + +C GCGDLI + + +++ WH C +C EC PL + ++G L+C +D+
Sbjct: 5 PGEEVWRCLGCGDLIAAGQRLYRMVNEAWHISCFRCSECQDPLTNWYYEKDGKLYCHKDY 64
Query: 125 FKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+ +FG C GC + + T V A + YH CFAC+ C + GD + L++ L C
Sbjct: 65 WGKFGESCHGCSLLM--TGPVMVAGEYKYHPECFACMSCKVIIEDGDTYALVQHSTLYC 121
>MGI|MGI:2385758 [details] [associations]
symbol:Ablim2 "actin-binding LIM protein 2" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=ISA] [GO:0030016 "myofibril" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 MGI:MGI:2385758
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520
Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 HOGENOM:HOG000285997 CTD:84448
EMBL:AJ748602 EMBL:AJ748603 EMBL:AY274116 EMBL:AK046243
EMBL:AK046879 EMBL:AK082707 EMBL:BC141125 IPI:IPI00226694
IPI:IPI00312739 IPI:IPI00463583 IPI:IPI00468743 IPI:IPI00480577
RefSeq:NP_001171168.1 RefSeq:NP_001171170.1 RefSeq:NP_001171171.1
RefSeq:NP_808346.3 UniGene:Mm.254446 ProteinModelPortal:Q8BL65
SMR:Q8BL65 STRING:Q8BL65 PhosphoSite:Q8BL65 PaxDb:Q8BL65
PRIDE:Q8BL65 DNASU:231148 Ensembl:ENSMUST00000054598
Ensembl:ENSMUST00000114204 Ensembl:ENSMUST00000114205
Ensembl:ENSMUST00000114206 Ensembl:ENSMUST00000114210 GeneID:231148
KEGG:mmu:231148 UCSC:uc008xeg.2 UCSC:uc012dve.1 UCSC:uc012dvf.1
UCSC:uc012dvh.1 OrthoDB:EOG4Z62NJ NextBio:380433 Bgee:Q8BL65
CleanEx:MM_ABLIM2 Genevestigator:Q8BL65
GermOnline:ENSMUSG00000029095 GO:GO:0030016 Uniprot:Q8BL65
Length = 612
Score = 215 (80.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 56/175 (32%), Positives = 89/175 (50%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLNAEYISKDGLPYCEADYHSKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GCE I T V A + YH +C CV C + + G+E YL + P +AA+
Sbjct: 213 DGCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFSEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D +K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TED--------KSKETRTS--SESIVSVP-ASSTSGSPSRVIYAKLGDEI-LDYR 311
Score = 169 (64.5 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFC 120
P+ P ++ C CG++ +L+V + +H RC C CG LAE F R G C
Sbjct: 13 PLEKPASTAILCNTCGNVCKGE-VLRVQNKYFHIRCFVCKACGCDLAEGGFFVRQGEHIC 71
Query: 121 KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRK 180
D+ + +GT+C C+ I +VV A YH +CF C +C GD ++
Sbjct: 72 TRDYQRLYGTRCFSCDRFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKE 128
Query: 181 LVCK 184
+C+
Sbjct: 129 CMCQ 132
>UNIPROTKB|J9PAF1 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 EMBL:AAEX03002409 EMBL:AAEX03002410
EMBL:AAEX03002411 Ensembl:ENSCAFT00000046666 Uniprot:J9PAF1
Length = 612
Score = 215 (80.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAEYISKDGLPYCEADYHTKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GCE I T V A + YH C CV C R G+E YL + P +AA+
Sbjct: 213 DGCEKYI--TGHVLEAGEKHYHPLCALCVRCGRMFAEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D NK R++ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TED--------KNKETRSS--SESIISVP-ASSTSGSPSRVIYAKLGDEI-LDYR 311
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFC 120
P+ P ++ C CG++ +L+V + +H +C C CG LAE F R G C
Sbjct: 13 PLEKPPSTAILCNTCGNVCKGE-VLRVQNKYFHIKCFVCKACGCDLAEGGFFVRQGEYIC 71
Query: 121 KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRK 180
D+ + +GT+C C+ I +VV A YH +CF C +C GD ++
Sbjct: 72 TLDYQRLYGTRCFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKE 128
Query: 181 LVCK 184
+C+
Sbjct: 129 CMCQ 132
>UNIPROTKB|J9NWS9 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 EMBL:AAEX03002409 EMBL:AAEX03002410
EMBL:AAEX03002411 Ensembl:ENSCAFT00000045774 Uniprot:J9NWS9
Length = 617
Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 158 CGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAEYISKDGLPYCEADYHTKFGIRC 217
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GCE I T V A + YH C CV C R G+E YL + P +AA+
Sbjct: 218 DGCEKYI--TGHVLEAGEKHYHPLCALCVRCGRMFAEGEEMYLQGSS--IWHPACRQAAR 273
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D NK R++ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 274 TED--------KNKETRSS--SESIISVP-ASSTSGSPSRVIYAKLGDEI-LDYR 316
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFC 120
P+ P ++ C CG++ +L+V + +H +C C CG LAE F R G C
Sbjct: 18 PLEKPPSTAILCNTCGNVCKGE-VLRVQNKYFHIKCFVCKACGCDLAEGGFFVRQGEYIC 76
Query: 121 KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRK 180
D+ + +GT+C C+ I +VV A YH +CF C +C GD ++
Sbjct: 77 TLDYQRLYGTRCFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKE 133
Query: 181 LVCK 184
+C+
Sbjct: 134 CMCQ 137
>UNIPROTKB|F1PCZ6 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 OMA:FRHHYIP
EMBL:AAEX03002409 EMBL:AAEX03002410 EMBL:AAEX03002411
Ensembl:ENSCAFT00000023075 Uniprot:F1PCZ6
Length = 643
Score = 215 (80.7 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 151 CGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAEYISKDGLPYCEADYHTKFGIRC 210
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GCE I T V A + YH C CV C R G+E YL + P +AA+
Sbjct: 211 DGCEKYI--TGHVLEAGEKHYHPLCALCVRCGRMFAEGEEMYLQGSS--IWHPACRQAAR 266
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D NK R++ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 267 TED--------KNKETRSS--SESIISVP-ASSTSGSPSRVIYAKLGDEI-LDYR 309
Score = 164 (62.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFC 120
P+ P ++ C CG++ +L+V + +H +C C CG LAE F R G C
Sbjct: 11 PLEKPPSTAILCNTCGNVCKGE-VLRVQNKYFHIKCFVCKACGCDLAEGGFFVRQGEYIC 69
Query: 121 KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRK 180
D+ + +GT+C C+ I +VV A YH +CF C +C GD ++
Sbjct: 70 TLDYQRLYGTRCFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKE 126
Query: 181 LVCK 184
+C+
Sbjct: 127 CMCQ 130
>RGD|1303094 [details] [associations]
symbol:Ablim2 "actin binding LIM protein family, member 2"
species:10116 "Rattus norvegicus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
RGD:1303094 GO:GO:0005737 GO:GO:0007010 GO:GO:0046872 GO:GO:0008270
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00700000104021
HOGENOM:HOG000285997 CTD:84448 EMBL:AJ703892 EMBL:AJ703893
IPI:IPI00421834 IPI:IPI00480816 RefSeq:NP_001001514.1
RefSeq:NP_001171166.1 UniGene:Rn.131797 ProteinModelPortal:Q6KC51
SMR:Q6KC51 STRING:Q6KC51 PRIDE:Q6KC51 Ensembl:ENSRNOT00000010482
GeneID:360958 KEGG:rno:360958 NextBio:674717 ArrayExpress:Q6KC51
Genevestigator:Q6KC51 GermOnline:ENSRNOG00000007882 Uniprot:Q6KC51
Length = 612
Score = 214 (80.4 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 56/175 (32%), Positives = 89/175 (50%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLNAEYISKDGLPYCEADYHTKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GCE I T V A + YH +C CV C + + G+E YL + P +AA+
Sbjct: 213 DGCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFSEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D +K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TED--------KSKETRTS--SESIVSVP-ASSTSGSPSRVIYAKLGDEI-LDYR 311
Score = 168 (64.2 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 37/111 (33%), Positives = 54/111 (48%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFC 120
P+ P ++ C CG++ +L+V + +H RC C CG LAE F R G C
Sbjct: 13 PLEKPASTAILCNTCGNVCKGE-VLRVQNKHFHIRCFVCKACGCDLAEGGFFVRQGEHIC 71
Query: 121 KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGD 171
D+ + +GT+C C+ I +VV A YH +CF C +C GD
Sbjct: 72 TRDYQRLYGTRCFSCDCFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGD 120
>UNIPROTKB|Q6KC51 [details] [associations]
symbol:Ablim2 "Actin-binding LIM protein 2" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 RGD:1303094
GO:GO:0005737 GO:GO:0007010 GO:GO:0046872 GO:GO:0008270
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00700000104021
HOGENOM:HOG000285997 CTD:84448 EMBL:AJ703892 EMBL:AJ703893
IPI:IPI00421834 IPI:IPI00480816 RefSeq:NP_001001514.1
RefSeq:NP_001171166.1 UniGene:Rn.131797 ProteinModelPortal:Q6KC51
SMR:Q6KC51 STRING:Q6KC51 PRIDE:Q6KC51 Ensembl:ENSRNOT00000010482
GeneID:360958 KEGG:rno:360958 NextBio:674717 ArrayExpress:Q6KC51
Genevestigator:Q6KC51 GermOnline:ENSRNOG00000007882 Uniprot:Q6KC51
Length = 612
Score = 214 (80.4 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 56/175 (32%), Positives = 89/175 (50%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLNAEYISKDGLPYCEADYHTKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
GCE I T V A + YH +C CV C + + G+E YL + P +AA+
Sbjct: 213 DGCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFSEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D +K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TED--------KSKETRTS--SESIVSVP-ASSTSGSPSRVIYAKLGDEI-LDYR 311
Score = 168 (64.2 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 37/111 (33%), Positives = 54/111 (48%)
Query: 62 PVYMPIASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFC 120
P+ P ++ C CG++ +L+V + +H RC C CG LAE F R G C
Sbjct: 13 PLEKPASTAILCNTCGNVCKGE-VLRVQNKHFHIRCFVCKACGCDLAEGGFFVRQGEHIC 71
Query: 121 KEDFFKRFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGD 171
D+ + +GT+C C+ I +VV A YH +CF C +C GD
Sbjct: 72 TRDYQRLYGTRCFSCDCFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGD 120
>UNIPROTKB|F5GZL6 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01010741 ProteinModelPortal:F5GZL6
SMR:F5GZL6 PRIDE:F5GZL6 Ensembl:ENST00000546334 ArrayExpress:F5GZL6
Bgee:F5GZL6 Uniprot:F5GZL6
Length = 531
Score = 210 (79.0 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGLPYCEADYHAKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
CE I T V A + YH +C CV C + G+E YL + P +AA+
Sbjct: 213 DSCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D N K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TEDRN--------KETRTS--SESIISVP-ASSTSGSPSRVIYAKLGGEI-LDYR 311
Score = 161 (61.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFCKEDFFKRFGTK 131
C CG++ +L+V ++ +H +C C CG LAE F R G C D+ + +GT+
Sbjct: 24 CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLDYQRLYGTR 82
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
C C+ I +VV A YH +CF C +C GD ++ +C+
Sbjct: 83 CFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKECMCQ 132
>UNIPROTKB|F5GYR0 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01011329 ProteinModelPortal:F5GYR0
SMR:F5GYR0 Ensembl:ENST00000545242 ArrayExpress:F5GYR0 Bgee:F5GYR0
Uniprot:F5GYR0
Length = 571
Score = 210 (79.0 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGLPYCEADYHAKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
CE I T V A + YH +C CV C + G+E YL + P +AA+
Sbjct: 213 DSCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D N K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TEDRN--------KETRTS--SESIISVP-ASSTSGSPSRVIYAKLGGEI-LDYR 311
Score = 161 (61.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFCKEDFFKRFGTK 131
C CG++ +L+V ++ +H +C C CG LAE F R G C D+ + +GT+
Sbjct: 24 CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLDYQRLYGTR 82
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
C C+ I +VV A YH +CF C +C GD ++ +C+
Sbjct: 83 CFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKECMCQ 132
>UNIPROTKB|F8W6D8 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01013991 ProteinModelPortal:F8W6D8
SMR:F8W6D8 Ensembl:ENST00000296372 ArrayExpress:F8W6D8 Bgee:F8W6D8
Uniprot:F8W6D8
Length = 573
Score = 210 (79.0 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGLPYCEADYHAKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
CE I T V A + YH +C CV C + G+E YL + P +AA+
Sbjct: 213 DSCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D N K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TEDRN--------KETRTS--SESIISVP-ASSTSGSPSRVIYAKLGGEI-LDYR 311
Score = 161 (61.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFCKEDFFKRFGTK 131
C CG++ +L+V ++ +H +C C CG LAE F R G C D+ + +GT+
Sbjct: 24 CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLDYQRLYGTR 82
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
C C+ I +VV A YH +CF C +C GD ++ +C+
Sbjct: 83 CFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKECMCQ 132
>UNIPROTKB|Q6H8Q1 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 HOGENOM:HOG000285997
EMBL:DQ413177 EMBL:AJ748600 EMBL:AJ748601 EMBL:AK094754
EMBL:AK094798 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
EMBL:BC067214 EMBL:BC122567 EMBL:AB058711 EMBL:AL834195
IPI:IPI00167702 IPI:IPI00187164 IPI:IPI00434484 IPI:IPI00479275
IPI:IPI00761095 IPI:IPI00892702 IPI:IPI00902561 IPI:IPI00910569
RefSeq:NP_001123555.1 RefSeq:NP_001123556.1 RefSeq:NP_001123557.1
RefSeq:NP_001123558.1 RefSeq:NP_001123559.1 RefSeq:NP_001123560.1
RefSeq:NP_115808.3 UniGene:Hs.233404 PDB:1V6G PDB:1WIG PDB:2L3X
PDBsum:1V6G PDBsum:1WIG PDBsum:2L3X ProteinModelPortal:Q6H8Q1
SMR:Q6H8Q1 IntAct:Q6H8Q1 STRING:Q6H8Q1 PhosphoSite:Q6H8Q1
DMDM:56404514 PaxDb:Q6H8Q1 PRIDE:Q6H8Q1 Ensembl:ENST00000318888
Ensembl:ENST00000341937 Ensembl:ENST00000361581
Ensembl:ENST00000361737 Ensembl:ENST00000407564
Ensembl:ENST00000428004 Ensembl:ENST00000505872
Ensembl:ENST00000514025 GeneID:84448 KEGG:hsa:84448 UCSC:uc003gkl.3
UCSC:uc003gko.3 UCSC:uc003gkp.3 UCSC:uc003gkq.3 UCSC:uc003gks.3
CTD:84448 GeneCards:GC04M007967 HGNC:HGNC:19195 HPA:HPA035808
MIM:612544 neXtProt:NX_Q6H8Q1 PharmGKB:PA134940437
EvolutionaryTrace:Q6H8Q1 GenomeRNAi:84448 NextBio:74223
ArrayExpress:Q6H8Q1 Bgee:Q6H8Q1 CleanEx:HS_ABLIM2
Genevestigator:Q6H8Q1 GermOnline:ENSG00000163995 GO:GO:0045111
Uniprot:Q6H8Q1
Length = 611
Score = 210 (79.0 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGLPYCEADYHAKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
CE I T V A + YH +C CV C + G+E YL + P +AA+
Sbjct: 213 DSCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D N K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TEDRN--------KETRTS--SESIISVP-ASSTSGSPSRVIYAKLGGEI-LDYR 311
Score = 161 (61.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFCKEDFFKRFGTK 131
C CG++ +L+V ++ +H +C C CG LAE F R G C D+ + +GT+
Sbjct: 24 CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLDYQRLYGTR 82
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
C C+ I +VV A YH +CF C +C GD ++ +C+
Sbjct: 83 CFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKECMCQ 132
>UNIPROTKB|E9PF39 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
GO:GO:0005634 GO:GO:0005737 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650
EMBL:AC114807 RefSeq:NP_001123555.1 UniGene:Hs.233404 GeneID:84448
KEGG:hsa:84448 CTD:84448 HGNC:HGNC:19195 GenomeRNAi:84448
NextBio:74223 GO:GO:0045111 GO:GO:0030016 IPI:IPI00761132
ProteinModelPortal:E9PF39 SMR:E9PF39 Ensembl:ENST00000447017
UCSC:uc003gkj.4 OMA:FRHHYIP ArrayExpress:E9PF39 Bgee:E9PF39
Uniprot:E9PF39
Length = 645
Score = 210 (79.0 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
CGGCG I + L L++ WH C KC CG L + +++GL +C+ D+ +FG +C
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGLPYCEADYHAKFGIRC 212
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDY-EAAK 191
CE I T V A + YH +C CV C + G+E YL + P +AA+
Sbjct: 213 DSCEKYI--TGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSS--IWHPACRQAAR 268
Query: 192 AKDGNCLDGDQPNKRPRTTITAKQLETLKMAYNTSPKPARHVREQLSQDTGLDMR 246
+D N K RT+ ++ + ++ A +TS P+R + +L + LD R
Sbjct: 269 TEDRN--------KETRTS--SESIISVP-ASSTSGSPSRVIYAKLGGEI-LDYR 311
Score = 161 (61.7 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEK-CFARNGLLFCKEDFFKRFGTK 131
C CG++ +L+V ++ +H +C C CG LAE F R G C D+ + +GT+
Sbjct: 24 CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYICTLDYQRLYGTR 82
Query: 132 CAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
C C+ I +VV A YH +CF C +C GD ++ +C+
Sbjct: 83 CFSCDQFIEG-EVVS-ALGKTYHPDCFVCAVCRLPFPPGDRV-TFNGKECMCQ 132
>RGD|62056 [details] [associations]
symbol:Limk2 "LIM domain kinase 2" species:10116 "Rattus
norvegicus" [GO:0004672 "protein kinase activity" evidence=ISO]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IDA;TAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005801 "cis-Golgi network" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006468 "protein
phosphorylation" evidence=ISO;IDA] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007286 "spermatid development" evidence=TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] Pfam:PF00595
Pfam:PF00412 InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR001478 InterPro:IPR001781 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 RGD:62056 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0007286 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270
BRENDA:2.7.10.2 Gene3D:2.10.110.10 SUPFAM:SSF50156 GO:GO:0005801
GeneTree:ENSGT00530000063025 HOGENOM:HOG000013121 HOVERGEN:HBG052328
CTD:3985 KO:K05744 OrthoDB:EOG4C87RX EMBL:D31874 EMBL:D31875
EMBL:D31876 EMBL:D31877 IPI:IPI00211995 IPI:IPI00231014
IPI:IPI00231015 IPI:IPI00231016 PIR:I78846 PIR:I78847 PIR:I78848
RefSeq:NP_077049.2 UniGene:Rn.11013 ProteinModelPortal:P53670
SMR:P53670 STRING:P53670 PhosphoSite:P53670 PRIDE:P53670
Ensembl:ENSRNOT00000026032 Ensembl:ENSRNOT00000041673
Ensembl:ENSRNOT00000050005 GeneID:29524 KEGG:rno:29524
UCSC:RGD:62056 InParanoid:P53670 NextBio:609480 ArrayExpress:P53670
Genevestigator:P53670 GermOnline:ENSRNOG00000019000 Uniprot:P53670
Length = 638
Score = 202 (76.2 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 35/113 (30%), Positives = 60/113 (53%)
Query: 72 KCGGCGDLI-LDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGT 130
+C GCG+ + L + + + WH+ C +C EC L + ++G L+C +D++ +FG
Sbjct: 11 RCRGCGNYVPLSQRLYRTANEAWHSSCFRCSECQESLTNWYYEKDGKLYCHKDYWAKFGE 70
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
C GC + + +V A + YH CFAC+ C + GD + L++ L C
Sbjct: 71 FCHGCSLLMTGPAMV--AGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYC 121
Score = 46 (21.3 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 217 ETLKMAYNTSPKPARHVREQLSQDTGLDMRVVQ----VWFQNRRAKEKRLKKDAGRT-RW 271
+TL++ P P R +QL DT L + + AKE + R+ R
Sbjct: 229 QTLQLLIEHDPVPQR--LDQLRLDTRLSPHMQSSGHTLMLSTLDAKENQEGTLRRRSLRR 286
Query: 272 SQYFRSMKGGTSPKDELKIDLDSNFSHS 299
S G +SPK+ L + D + S S
Sbjct: 287 SNSISKSPGPSSPKEPLLLSRDISRSES 314
>ZFIN|ZDB-GENE-040718-398 [details] [associations]
symbol:limk2 "LIM domain kinase 2" species:7955
"Danio rerio" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00478 PROSITE:PS50011
PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132 SMART:SM00228
ZFIN:ZDB-GENE-040718-398 GO:GO:0005524 GO:GO:0046872
SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0004672 Gene3D:2.10.110.10
SUPFAM:SSF50156 GeneTree:ENSGT00530000063025 HOGENOM:HOG000013121
HOVERGEN:HBG052328 CTD:3985 KO:K05744 OrthoDB:EOG4C87RX OMA:DARLSPH
EMBL:BX927203 EMBL:BC076525 IPI:IPI00773226 RefSeq:NP_001002651.1
UniGene:Dr.76343 SMR:Q6DG29 STRING:Q6DG29
Ensembl:ENSDART00000093185 GeneID:436924 KEGG:dre:436924
InParanoid:Q6DG29 NextBio:20831351 Uniprot:Q6DG29
Length = 651
Score = 208 (78.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/116 (36%), Positives = 58/116 (50%)
Query: 73 CGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARNGLLFCKEDFFKRFGTKC 132
C GCG I D F +KVL+ WH C +C C L F + G LFC + + ++FG C
Sbjct: 12 CTGCGGRIQDAFHVKVLQDAWHNSCFQCSVCFDLLTNWYFEKEGRLFCHKHYCEKFGELC 71
Query: 133 AGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYE 188
GC + + +V A D YH CF C+ C + D + L+E KL C Y+
Sbjct: 72 HGCSLLMTGPAMV--AGDYKYHPECFVCLSCRVVIEDRDTYALVERTKLYCGKCYK 125
>FB|FBgn0050178 [details] [associations]
symbol:CG30178 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
HSSP:Q05158 GeneTree:ENSGT00690000101670 RefSeq:NP_726395.1
UniGene:Dm.29107 ProteinModelPortal:Q8MLQ2 SMR:Q8MLQ2 PRIDE:Q8MLQ2
EnsemblMetazoa:FBtr0072159 GeneID:246501 KEGG:dme:Dmel_CG30178
UCSC:CG30178-RA FlyBase:FBgn0050178 InParanoid:Q8MLQ2 OMA:WHEKCFR
OrthoDB:EOG4ZS7K7 PhylomeDB:Q8MLQ2 GenomeRNAi:246501 NextBio:842709
ArrayExpress:Q8MLQ2 Bgee:Q8MLQ2 Uniprot:Q8MLQ2
Length = 187
Score = 187 (70.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 72 KCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFAR-NGLLFCKEDFFKRFGT 130
+C C IL+R + ER WH +C +C C L F NG LFCK F + F +
Sbjct: 64 RCSACRTPILERGVAAA-ERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRELFSS 122
Query: 131 KCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVC 183
+CAGCE I VV A +H CF C C ++++ EF++ E+ + +C
Sbjct: 123 RCAGCEKPIDRRAVV--ALSTKWHAKCFKCHHCRKRISAR-EFWI-ENGQPIC 171
Score = 125 (49.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 39/149 (26%), Positives = 65/149 (43%)
Query: 68 ASIPKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCF-ARNGLLFCKEDFFK 126
ASI C C + I R + L +T+H C ECG + K F A + + C E +
Sbjct: 3 ASI--CCRCNEKIWPRAVCS-LGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYLD 59
Query: 127 RFGTKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPD 186
+ +C+ C I V A + +H CF CV C++ L + F + + L CK
Sbjct: 60 KHAARCSACRTPILERGVA--AAERKWHEKCFRCVSCSKSLVSASFFEV--NGYLFCKAH 115
Query: 187 YEAAKAKDGNCLDGDQP-NKRPRTTITAK 214
+ + C ++P ++R ++ K
Sbjct: 116 FR--ELFSSRCAGCEKPIDRRAVVALSTK 142
>UNIPROTKB|G3MY19 [details] [associations]
symbol:PDLIM5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030018 "Z disc" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0030018 GO:GO:0046872
GO:GO:0015629 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104411 OMA:SSPEKYH EMBL:DAAA02016918
EMBL:DAAA02016919 EMBL:DAAA02016920 Ensembl:ENSBTAT00000064437
Uniprot:G3MY19
Length = 544
Score = 206 (77.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCF-ARNGLLFCKEDFFKRFG 129
P+CG C IL ++ L++TWH C C CG P+ F +G +C+ D++ FG
Sbjct: 425 PECGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFG 483
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
T C GCE I + A +H CF C +C L G F+ +D+ L CK
Sbjct: 484 TICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLE-GQTFFSKKDKPL-CK 536
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARN-GLLFCKEDFFKRFG 129
P C C +I L L ++WH C C +A F G L+C+ + K F
Sbjct: 365 PMCAHCNQVISRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFA 424
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+C C+ I +V+ + +H++CF CV C + + + F+L ED + C+ DY A
Sbjct: 425 PECGRCQRKILG-EVINALKQ-TWHVSCFVCVACGKPIRN-NVFHL-EDGEPYCETDYYA 480
>UNIPROTKB|F5H7Y0 [details] [associations]
symbol:PDLIM5 "PDZ and LIM domain protein 5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0042805 "actinin binding" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0051963 "regulation of
synapse assembly" evidence=IEA] [GO:0061001 "regulation of
dendritic spine morphogenesis" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005829 GO:GO:0014069 GO:GO:0030018 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0051963 GO:GO:0061001
EMBL:AC093778 EMBL:AC108067 EMBL:AC109925 HGNC:HGNC:17468
ChiTaRS:PDLIM5 IPI:IPI00973432 ProteinModelPortal:F5H7Y0 SMR:F5H7Y0
Ensembl:ENST00000542407 UCSC:uc003htj.3 ArrayExpress:F5H7Y0
Bgee:F5H7Y0 Uniprot:F5H7Y0
Length = 474
Score = 205 (77.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCF-ARNGLLFCKEDFFKRFG 129
P+CG C IL ++ L++TWH C C CG P+ F +G +C+ D++ FG
Sbjct: 355 PECGRCQRKILGE-VISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFG 413
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
T C GCE I + A +H CF C +C L G F+ +D+ L CK
Sbjct: 414 TICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLE-GQTFFSKKDKPL-CK 466
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARN-GLLFCKEDFFKRFG 129
P C C +I F++ L ++WH C C +A F G L+C+ + K F
Sbjct: 296 PMCAHCNQVIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 354
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+C C+ I +V+ + +H++CF CV C + + + F+L ED + C+ DY A
Sbjct: 355 PECGRCQRKILG-EVISALKQ-TWHVSCFVCVACGKPIRN-NVFHL-EDGEPYCETDYYA 410
>MGI|MGI:1927489 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain 5" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISO] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0030018 "Z disc" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042805 "actinin
binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0051963 "regulation of synapse assembly"
evidence=ISO] [GO:0061001 "regulation of dendritic spine
morphogenesis" evidence=ISO] Pfam:PF00595 Pfam:PF00412
InterPro:IPR001478 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132 SMART:SM00228
MGI:MGI:1927489 GO:GO:0005829 GO:GO:0005886 GO:GO:0014069
GO:GO:0030018 GO:GO:0046872 GO:GO:0015629 GO:GO:0030054
GO:GO:0045211 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0051963
SUPFAM:SSF50156 GO:GO:0061001 eggNOG:NOG286537 HOGENOM:HOG000220936
HOVERGEN:HBG051478 GeneTree:ENSGT00700000104411 CTD:10611
OMA:SGLHANA OrthoDB:EOG4FTW06 EMBL:AB016586 EMBL:AB016587
EMBL:AB016588 EMBL:AK147999 EMBL:BC037476 IPI:IPI00415684
IPI:IPI00415685 IPI:IPI00828969 RefSeq:NP_001177781.1
RefSeq:NP_001177783.1 RefSeq:NP_001177784.1 RefSeq:NP_001177785.1
RefSeq:NP_062782.2 UniGene:Mm.117709 PDB:1WF7 PDBsum:1WF7
ProteinModelPortal:Q8CI51 SMR:Q8CI51 IntAct:Q8CI51 STRING:Q8CI51
PhosphoSite:Q8CI51 PaxDb:Q8CI51 PRIDE:Q8CI51
Ensembl:ENSMUST00000029941 Ensembl:ENSMUST00000168967 GeneID:56376
KEGG:mmu:56376 UCSC:uc008ron.2 UCSC:uc012cyt.1 InParanoid:Q3UGD0
EvolutionaryTrace:Q8CI51 NextBio:312444 Bgee:Q8CI51
CleanEx:MM_PDLIM5 Genevestigator:Q8CI51
GermOnline:ENSMUSG00000028273 Uniprot:Q8CI51
Length = 591
Score = 206 (77.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCF-ARNGLLFCKEDFFKRFG 129
P+CG C IL ++ L++TWH C C CG P+ F +G +C+ D++ FG
Sbjct: 472 PECGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFG 530
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
T C GCE I + A +H CF C +C L G F+ +D+ L CK
Sbjct: 531 TICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLE-GQTFFSKKDKPL-CK 583
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARN-GLLFCKEDFFKRFG 129
P C C +I F++ L ++WH C C +A F G L+C+ + K F
Sbjct: 413 PMCAHCNQVIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 471
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+C C+ I +V+ + +H++CF CV C + + + F+L ED + C+ DY A
Sbjct: 472 PECGRCQRKILG-EVINALKQ-TWHVSCFVCVACGKPIRN-NVFHL-EDGEPYCETDYYA 527
>UNIPROTKB|F1LMU8 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain protein 5" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 RGD:621076 GO:GO:0030018 GO:GO:0046872
GO:GO:0015629 GO:GO:0008270 Gene3D:2.10.110.10 SUPFAM:SSF50156
GeneTree:ENSGT00700000104411 IPI:IPI00210187 PRIDE:F1LMU8
Ensembl:ENSRNOT00000022387 ArrayExpress:F1LMU8 Uniprot:F1LMU8
Length = 559
Score = 205 (77.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCF-ARNGLLFCKEDFFKRFG 129
P+CG C IL ++ L++TWH C C CG P+ F +G +C+ D++ FG
Sbjct: 440 PECGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFG 498
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
T C GCE I + A +H CF C +C L G F+ +D+ L CK
Sbjct: 499 TICRGCEFPIEAGDMFLEALGSTWHDTCFVCSVCCESLE-GQTFFSKKDKPL-CK 551
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARN-GLLFCKEDFFKRFG 129
P C C I F++ L ++WH C C +A F G L+C+ + K F
Sbjct: 381 PMCAHCNQAIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 439
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+C C+ I +V+ + +H++CF CV C + + + F+L ED + C+ DY A
Sbjct: 440 PECGRCQRKILG-EVINALKQ-TWHVSCFVCVACGKPIRN-NVFHL-EDGEPYCETDYYA 495
>RGD|621076 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain 5" species:10116 "Rattus
norvegicus" [GO:0003779 "actin binding" evidence=IDA] [GO:0005080
"protein kinase C binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007507 "heart
development" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030018 "Z disc" evidence=IEA;ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030159 "receptor
signaling complex scaffold activity" evidence=NAS] [GO:0042805
"actinin binding" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IMP] [GO:0051963 "regulation of synapse assembly"
evidence=IDA] [GO:0061001 "regulation of dendritic spine
morphogenesis" evidence=IDA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR001478 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132 SMART:SM00228
RGD:621076 GO:GO:0005829 GO:GO:0005886 GO:GO:0003779 GO:GO:0005080
GO:GO:0014069 GO:GO:0007507 GO:GO:0030018 GO:GO:0016020
GO:GO:0046872 GO:GO:0015629 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0051963 SUPFAM:SSF50156
GO:GO:0030159 GO:GO:0047485 GO:GO:0061001 GO:GO:0042805
eggNOG:NOG286537 HOGENOM:HOG000220936 HOVERGEN:HBG051478 CTD:10611
OrthoDB:EOG4FTW06 EMBL:U48247 IPI:IPI00210187 RefSeq:NP_445778.1
UniGene:Rn.210185 ProteinModelPortal:Q62920 SMR:Q62920
IntAct:Q62920 STRING:Q62920 PhosphoSite:Q62920 PRIDE:Q62920
GeneID:64353 KEGG:rno:64353 InParanoid:Q62920 NextBio:613036
ArrayExpress:Q62920 Genevestigator:Q62920
GermOnline:ENSRNOG00000016419 Uniprot:Q62920
Length = 591
Score = 205 (77.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCF-ARNGLLFCKEDFFKRFG 129
P+CG C IL ++ L++TWH C C CG P+ F +G +C+ D++ FG
Sbjct: 472 PECGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFG 530
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
T C GCE I + A +H CF C +C L G F+ +D+ L CK
Sbjct: 531 TICRGCEFPIEAGDMFLEALGSTWHDTCFVCSVCCESLE-GQTFFSKKDKPL-CK 583
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARN-GLLFCKEDFFKRFG 129
P C C I F++ L ++WH C C +A F G L+C+ + K F
Sbjct: 413 PMCAHCNQAIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 471
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+C C+ I +V+ + +H++CF CV C + + + F+L ED + C+ DY A
Sbjct: 472 PECGRCQRKILG-EVINALKQ-TWHVSCFVCVACGKPIRN-NVFHL-EDGEPYCETDYYA 527
>UNIPROTKB|Q62920 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain protein 5" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 RGD:621076 GO:GO:0005829 GO:GO:0005886 GO:GO:0003779
GO:GO:0005080 GO:GO:0014069 GO:GO:0007507 GO:GO:0030018
GO:GO:0016020 GO:GO:0046872 GO:GO:0015629 GO:GO:0030054
GO:GO:0045211 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0051963
SUPFAM:SSF50156 GO:GO:0030159 GO:GO:0047485 GO:GO:0061001
GO:GO:0042805 eggNOG:NOG286537 HOGENOM:HOG000220936
HOVERGEN:HBG051478 CTD:10611 OrthoDB:EOG4FTW06 EMBL:U48247
IPI:IPI00210187 RefSeq:NP_445778.1 UniGene:Rn.210185
ProteinModelPortal:Q62920 SMR:Q62920 IntAct:Q62920 STRING:Q62920
PhosphoSite:Q62920 PRIDE:Q62920 GeneID:64353 KEGG:rno:64353
InParanoid:Q62920 NextBio:613036 ArrayExpress:Q62920
Genevestigator:Q62920 GermOnline:ENSRNOG00000016419 Uniprot:Q62920
Length = 591
Score = 205 (77.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCF-ARNGLLFCKEDFFKRFG 129
P+CG C IL ++ L++TWH C C CG P+ F +G +C+ D++ FG
Sbjct: 472 PECGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFG 530
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCK 184
T C GCE I + A +H CF C +C L G F+ +D+ L CK
Sbjct: 531 TICRGCEFPIEAGDMFLEALGSTWHDTCFVCSVCCESLE-GQTFFSKKDKPL-CK 583
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 71 PKCGGCGDLILDRFILKVLERTWHARCLKCHECGAPLAEKCFARN-GLLFCKEDFFKRFG 129
P C C I F++ L ++WH C C +A F G L+C+ + K F
Sbjct: 413 PMCAHCNQAIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 471
Query: 130 TKCAGCEMGIPPTQVVRRAQDLVYHLNCFACVMCARQLNTGDEFYLMEDRKLVCKPDYEA 189
+C C+ I +V+ + +H++CF CV C + + + F+L ED + C+ DY A
Sbjct: 472 PECGRCQRKILG-EVINALKQ-TWHVSCFVCVACGKPIRN-NVFHL-EDGEPYCETDYYA 527
WARNING: HSPs involving 869 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 297 0.00093 115 3 11 22 0.48 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1119
No. of states in DFA: 615 (65 KB)
Total size of DFA: 239 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:08
No. of threads or processors used: 24
Search cpu time: 26.70u 0.09s 26.79t Elapsed: 00:00:29
Total cpu time: 26.75u 0.09s 26.84t Elapsed: 00:00:41
Start: Thu Aug 15 12:44:26 2013 End: Thu Aug 15 12:45:07 2013
WARNINGS ISSUED: 2