Your job contains 1 sequence.
>psy4327
MAQAIFDLQTYRVSVMAAATEVKKDEKKKVAKPKTPKTGEEKKVAKKATATTPSKDAKAT
DTKKVKKTKKHKRLRLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVG
KRCVFLYKAKTKELKPHSKRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRI
MLYPSNI
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4327
(187 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037328 - symbol:RpL35A "Ribosomal protein L35A" s... 387 7.2e-36 1
WB|WBGene00004447 - symbol:rpl-33 species:6239 "Caenorhab... 353 2.9e-32 1
RGD|2318348 - symbol:LOC100362338 "ribosomal protein L35a... 324 3.4e-29 1
RGD|2318932 - symbol:LOC100362049 "ribosomal protein L35a... 322 5.6e-29 1
RGD|2323316 - symbol:LOC100359825 "ribosomal protein L35a... 322 5.6e-29 1
UNIPROTKB|E2QYD8 - symbol:RPL35A "Uncharacterized protein... 319 1.2e-28 1
UNIPROTKB|P18077 - symbol:RPL35A "60S ribosomal protein L... 319 1.2e-28 1
UNIPROTKB|F2Z5Q8 - symbol:RPL35A "Uncharacterized protein... 319 1.2e-28 1
UNIPROTKB|Q56JY1 - symbol:RPL35A "60S ribosomal protein L... 318 1.5e-28 1
RGD|628793 - symbol:Rpl35a "ribosomal protein L35a" speci... 318 1.5e-28 1
UNIPROTKB|F1NQ35 - symbol:RPL35A "Uncharacterized protein... 316 2.4e-28 1
ZFIN|ZDB-GENE-040718-190 - symbol:rpl35a "ribosomal prote... 311 8.2e-28 1
RGD|2323736 - symbol:LOC100362957 "ribosomal protein L35a... 308 1.7e-27 1
TAIR|locus:2019627 - symbol:AT1G74270 species:3702 "Arabi... 307 2.2e-27 1
TAIR|locus:2033548 - symbol:AT1G41880 species:3702 "Arabi... 304 4.5e-27 1
TAIR|locus:2007422 - symbol:AT1G07070 species:3702 "Arabi... 303 5.7e-27 1
TAIR|locus:2078991 - symbol:AT3G55750 species:3702 "Arabi... 303 5.7e-27 1
RGD|2325092 - symbol:LOC100359636 "ribosomal protein L35a... 302 7.3e-27 1
UNIPROTKB|E1BHM9 - symbol:E1BHM9 "Uncharacterized protein... 294 5.2e-26 1
UNIPROTKB|E1BMJ8 - symbol:LOC781576 "Uncharacterized prot... 291 1.1e-25 1
RGD|1560900 - symbol:RGD1560900 "similar to ribosomal pro... 285 4.6e-25 1
UNIPROTKB|F1M0T2 - symbol:F1M0T2 "Uncharacterized protein... 279 2.0e-24 1
UNIPROTKB|I3LIK0 - symbol:LOC100516261 "Uncharacterized p... 278 2.6e-24 1
POMBASE|SPBC1921.01c - symbol:rpl35b "60S ribosomal prote... 275 5.3e-24 1
ASPGD|ASPL0000041158 - symbol:AN2980 species:162425 "Emer... 273 8.7e-24 1
UNIPROTKB|C9K025 - symbol:RPL35A "60S ribosomal protein L... 273 8.7e-24 1
RGD|6498396 - symbol:LOC100910496 "60S ribosomal protein ... 273 8.7e-24 1
POMBASE|SPCP31B10.08c - symbol:rpl35a "60S ribosomal prot... 272 1.1e-23 1
GENEDB_PFALCIPARUM|PF11_0438 - symbol:PF11_0438 "Ribosoma... 270 1.8e-23 1
UNIPROTKB|Q8IHT9 - symbol:PF11_0438 "60S ribosomal protei... 270 1.8e-23 1
RGD|1597244 - symbol:H60c "histocompatibility 60c" specie... 269 2.3e-23 1
UNIPROTKB|J9P9Q2 - symbol:J9P9Q2 "Uncharacterized protein... 268 2.9e-23 1
SGD|S000006064 - symbol:RPL33A "Ribosomal 60S subunit pro... 260 2.1e-22 1
SGD|S000005760 - symbol:RPL33B "Ribosomal 60S subunit pro... 256 5.5e-22 1
UNIPROTKB|G4MRJ2 - symbol:MGG_09927 "60S ribosomal protei... 238 4.4e-20 1
DICTYBASE|DDB_G0270424 - symbol:rpl35a "S60 ribosomal pro... 235 9.2e-20 1
UNIPROTKB|F8WB72 - symbol:RPL35A "60S ribosomal protein L... 160 8.2e-12 1
UNIPROTKB|F8WBS5 - symbol:RPL35A "60S ribosomal protein L... 160 8.2e-12 1
>FB|FBgn0037328 [details] [associations]
symbol:RpL35A "Ribosomal protein L35A" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA]
[GO:0005840 "ribosome" evidence=IDA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
EMBL:AE014297 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972 CTD:6165
EMBL:AY071136 EMBL:AY071732 RefSeq:NP_649539.1 UniGene:Dm.1069
SMR:Q9VNB9 MINT:MINT-944394 STRING:Q9VNB9
EnsemblMetazoa:FBtr0078769 GeneID:40654 KEGG:dme:Dmel_CG2099
UCSC:CG2099-RA FlyBase:FBgn0037328 InParanoid:Q9VNB9
OrthoDB:EOG42RBQR ChiTaRS:RPL35A GenomeRNAi:40654 NextBio:819867
Uniprot:Q9VNB9
Length = 157
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 70/112 (62%), Positives = 91/112 (81%)
Query: 77 RHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKP 136
RHGRL+A+A+FTG+KRG RNQH N ++L IE KE FYVGKRCV++YKA+TK+ P
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105
Query: 137 -HSKRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
H +RK+R+RA+WGKVTR HG++G+VRA+F+RNLP MG ++RIMLYPS I
Sbjct: 106 QHPERKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>WB|WBGene00004447 [details] [associations]
symbol:rpl-33 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040017 "positive regulation of locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247
ProDom:PD012670 PROSITE:PS01105 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0040017
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451 HOGENOM:HOG000195636
PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972
EMBL:FO081111 PIR:T34207 RefSeq:NP_495468.1
ProteinModelPortal:P49180 SMR:P49180 STRING:P49180 PaxDb:P49180
EnsemblMetazoa:F10E7.7.1 EnsemblMetazoa:F10E7.7.2 GeneID:174166
KEGG:cel:CELE_F10E7.7 UCSC:F10E7.7.1 CTD:174166 WormBase:F10E7.7
InParanoid:P49180 NextBio:882813 Uniprot:P49180
Length = 124
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 66/109 (60%), Positives = 82/109 (75%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRLY +AIFTGFKRG R Q +TSLL +E KEDA FY GKR V+LYKA K LK
Sbjct: 16 GRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGH 75
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
+R RAIWGK+TRPHG++G+VRAKFH N+P +G+++R++LYPSNI
Sbjct: 76 TVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124
>RGD|2318348 [details] [associations]
symbol:LOC100362338 "ribosomal protein L35a-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
RGD:2318348 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902 OMA:CAKFRSN
GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00400634
RefSeq:XP_002728500.1 RefSeq:XP_003752996.1
ProteinModelPortal:D3ZZN4 Ensembl:ENSRNOT00000043796
GeneID:100362338 KEGG:rno:100362338 Uniprot:D3ZZN4
Length = 110
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 60/109 (55%), Positives = 79/109 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF RNLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRRNLPAKAIGHRIRVMLYPSRI 110
>RGD|2318932 [details] [associations]
symbol:LOC100362049 "ribosomal protein L35a-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
RGD:2318932 RGD:2323316 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 OMA:ISYQRSK PANTHER:PTHR10902
GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00476633
RefSeq:XP_002726801.1 RefSeq:XP_002729684.1
ProteinModelPortal:D4A771 PRIDE:D4A771 Ensembl:ENSRNOT00000043587
GeneID:100362049 KEGG:rno:100362049 UCSC:RGD:2318932 Uniprot:D4A771
Length = 110
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 60/109 (55%), Positives = 79/109 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P S
Sbjct: 3 GRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGS 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>RGD|2323316 [details] [associations]
symbol:LOC100359825 "ribosomal protein L35a-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
RGD:2318932 RGD:2323316 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 OMA:ISYQRSK PANTHER:PTHR10902
GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00476633
RefSeq:XP_002726801.1 RefSeq:XP_002729684.1
ProteinModelPortal:D4A771 PRIDE:D4A771 Ensembl:ENSRNOT00000043587
GeneID:100362049 KEGG:rno:100362049 UCSC:RGD:2318932 Uniprot:D4A771
Length = 110
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 60/109 (55%), Positives = 79/109 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P S
Sbjct: 3 GRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGS 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UNIPROTKB|E2QYD8 [details] [associations]
symbol:RPL35A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972 CTD:6165
EMBL:AAEX03017077 RefSeq:XP_535773.1 RefSeq:XP_858367.1
ProteinModelPortal:E2QYD8 SMR:E2QYD8 PRIDE:E2QYD8
Ensembl:ENSCAFT00000020171 GeneID:478597 KEGG:cfa:478597
NextBio:20853914 Uniprot:E2QYD8
Length = 110
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 59/109 (54%), Positives = 79/109 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UNIPROTKB|P18077 [details] [associations]
symbol:RPL35A "60S ribosomal protein L35a" species:9606
"Homo sapiens" [GO:0000049 "tRNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IMP] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IMP] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
GO:GO:0003735 GO:GO:0042273 GO:GO:0000049 GO:GO:0006364
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 KO:K02917
GO:GO:0019083 eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902
OMA:FYVGKRC Orphanet:124 CTD:6165 HOVERGEN:HBG054581
OrthoDB:EOG4FR0T3 EMBL:X52966 EMBL:AY871273 EMBL:CH471252
EMBL:BC001037 EMBL:BC010949 EMBL:BC017093 EMBL:BC061890 EMBL:X94619
IPI:IPI00029731 PIR:S12710 RefSeq:NP_000987.2 UniGene:Hs.529631
ProteinModelPortal:P18077 SMR:P18077 IntAct:P18077
MINT:MINT-1163509 STRING:P18077 PhosphoSite:P18077 DMDM:22002061
SWISS-2DPAGE:P18077 PaxDb:P18077 PRIDE:P18077 DNASU:6165
Ensembl:ENST00000448864 Ensembl:ENST00000464167 GeneID:6165
KEGG:hsa:6165 UCSC:uc003fyr.3 GeneCards:GC03P197676
H-InvDB:HIX0005661 H-InvDB:HIX0163429 H-InvDB:HIX0170318
H-InvDB:HIX0170319 HGNC:HGNC:10345 MIM:180468 MIM:612528
neXtProt:NX_P18077 PharmGKB:PA34728 InParanoid:P18077
PhylomeDB:P18077 GenomeRNAi:6165 NextBio:23949 ArrayExpress:P18077
Bgee:P18077 CleanEx:HS_RPL35A Genevestigator:P18077
GermOnline:ENSG00000182899 Uniprot:P18077
Length = 110
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 59/109 (54%), Positives = 79/109 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UNIPROTKB|F2Z5Q8 [details] [associations]
symbol:RPL35A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
GO:GO:0003735 GO:GO:0042273 GO:GO:0006364 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 KO:K02917 PANTHER:PTHR10902
OMA:FYVGKRC GeneTree:ENSGT00390000016972 EMBL:CU694544
EMBL:CU640404 RefSeq:XP_003357274.1 RefSeq:XP_003358821.1
RefSeq:XP_003358822.1 SMR:F2Z5Q8 Ensembl:ENSSSCT00000012969
Ensembl:ENSSSCT00000016266 GeneID:100514796 GeneID:100519675
KEGG:ssc:100514796 KEGG:ssc:100519675 Uniprot:F2Z5Q8
Length = 110
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 59/109 (54%), Positives = 79/109 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UNIPROTKB|Q56JY1 [details] [associations]
symbol:RPL35A "60S ribosomal protein L35a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0000049 "tRNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917
eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
GeneTree:ENSGT00390000016972 EMBL:AY911347 EMBL:BC111654
IPI:IPI00697014 RefSeq:NP_001020492.1 UniGene:Bt.15384
UniGene:Bt.65591 ProteinModelPortal:Q56JY1 STRING:Q56JY1
PRIDE:Q56JY1 Ensembl:ENSBTAT00000018888 GeneID:506768
KEGG:bta:506768 CTD:6165 HOVERGEN:HBG054581 InParanoid:Q56JY1
OrthoDB:EOG4FR0T3 NextBio:20867746 ArrayExpress:Q56JY1
Uniprot:Q56JY1
Length = 110
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 58/109 (53%), Positives = 79/109 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGK+TR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKITRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>RGD|628793 [details] [associations]
symbol:Rpl35a "ribosomal protein L35a" species:10116 "Rattus
norvegicus" [GO:0000049 "tRNA binding" evidence=TAS] [GO:0003735
"structural constituent of ribosome" evidence=TAS] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005840 "ribosome" evidence=TAS]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=ISO] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 RGD:628793
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
GeneTree:ENSGT00390000016972 CTD:6165 HOVERGEN:HBG054581
OrthoDB:EOG4FR0T3 EMBL:X03475 EMBL:BC061557 IPI:IPI00197720
PIR:A25404 RefSeq:NP_067087.1 RefSeq:XP_002725811.1
RefSeq:XP_002726700.1 RefSeq:XP_002727940.1 RefSeq:XP_002727941.1
RefSeq:XP_002727942.1 RefSeq:XP_002728899.1 RefSeq:XP_002729606.1
RefSeq:XP_003751166.1 RefSeq:XP_003752544.1 RefSeq:XP_003752545.1
RefSeq:XP_003752546.1 UniGene:Rn.156479 UniGene:Rn.2812
ProteinModelPortal:P04646 SMR:P04646 STRING:P04646 PRIDE:P04646
Ensembl:ENSRNOT00000040261 Ensembl:ENSRNOT00000042285
Ensembl:ENSRNOT00000050438 Ensembl:ENSRNOT00000059047
GeneID:100359498 GeneID:100359825 GeneID:100361473 GeneID:100910496
GeneID:57809 KEGG:rno:100359498 KEGG:rno:100359825
KEGG:rno:100361473 KEGG:rno:100910496 KEGG:rno:57809
UCSC:RGD:628793 InParanoid:P04646 NextBio:611330
Genevestigator:P04646 GermOnline:ENSRNOG00000029454
GermOnline:ENSRNOG00000031641 GermOnline:ENSRNOG00000032303
GermOnline:ENSRNOG00000038678 Uniprot:P04646
Length = 110
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 59/109 (54%), Positives = 78/109 (71%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UNIPROTKB|F1NQ35 [details] [associations]
symbol:RPL35A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IEA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 PANTHER:PTHR10902
OMA:FYVGKRC GeneTree:ENSGT00390000016972 EMBL:AADN02020638
IPI:IPI00576833 Ensembl:ENSGALT00000012307 Uniprot:F1NQ35
Length = 113
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/109 (54%), Positives = 77/109 (70%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +A F G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 6 GRLWCKATFAGYKRGLRNQREHTALLKIEGVYARQETEFYLGKRCAYVYKAKNNTVTPGG 65
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K +R R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 66 K-PNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 113
>ZFIN|ZDB-GENE-040718-190 [details] [associations]
symbol:rpl35a "ribosomal protein L35a" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
ZFIN:ZDB-GENE-040718-190 GO:GO:0006412 GO:GO:0005840 GO:GO:0009790
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917
HOGENOM:HOG000195636 PANTHER:PTHR10902 GeneTree:ENSGT00390000016972
CTD:6165 HOVERGEN:HBG054581 EMBL:FP017147 EMBL:CU896647
EMBL:BC076321 IPI:IPI00508277 RefSeq:NP_001002487.1 UniGene:Dr.1432
Ensembl:ENSDART00000121770 Ensembl:ENSDART00000147185 GeneID:436760
KEGG:dre:436760 InParanoid:Q6DGM0 NextBio:20831197 Uniprot:Q6DGM0
Length = 110
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 58/109 (53%), Positives = 78/109 (71%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+KRG RNQ +T+LL +E + + FY+GKRC ++YKAK K P
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKLEGVYNRGEVDFYLGKRCAYVYKAKKKTATPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS +
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFKSNLPAKAIGHRIRVMLYPSRV 110
>RGD|2323736 [details] [associations]
symbol:LOC100362957 "ribosomal protein L35a-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
RGD:2323736 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 OMA:GERCAYV
IPI:IPI00207615 RefSeq:XP_002729247.1 RefSeq:XP_003753801.1
ProteinModelPortal:D3ZYY1 PRIDE:D3ZYY1 Ensembl:ENSRNOT00000043508
GeneID:100362957 KEGG:rno:100362957 UCSC:RGD:2323736 Uniprot:D3ZYY1
Length = 110
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 57/109 (52%), Positives = 77/109 (70%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +AIF +KRG RNQ +T+LL IE +++ FY+G+RC ++YKAK + P
Sbjct: 3 GRLWCKAIFAAYKRGLRNQREHTTLLKIEGVYARDETEFYLGERCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>TAIR|locus:2019627 [details] [associations]
symbol:AT1G74270 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 EnsemblPlants:AT1G74270.1 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC020579 GO:GO:0022625
KO:K02917 HOGENOM:HOG000195636 ProtClustDB:CLSN2682223
PANTHER:PTHR10902 EMBL:AF370320 EMBL:AY063108 EMBL:AY085956
IPI:IPI00520606 PIR:B96771 RefSeq:NP_177567.1 UniGene:At.18151
ProteinModelPortal:Q9C912 SMR:Q9C912 STRING:Q9C912 GeneID:843767
KEGG:ath:AT1G74270 KEGG:dosa:Os05t0555800-00 GeneFarm:166
TAIR:At1g74270 InParanoid:Q9C912 OMA:FYVGKRC PhylomeDB:Q9C912
Genevestigator:Q9C912 GermOnline:AT1G74270 Uniprot:Q9C912
Length = 112
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 61/108 (56%), Positives = 74/108 (68%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY R G+KR + NQ+PNTSL+ IE NT+E+ +Y GKR ++YKAKTK K
Sbjct: 11 RLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTK------K 64
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
S R IWGKVTRPHG+SG VRAKF NLP MG +VR+ +YPSNI
Sbjct: 65 NGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>TAIR|locus:2033548 [details] [associations]
symbol:AT1G41880 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
EnsemblPlants:AT1G41880.1 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0016020 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 KO:K02917 eggNOG:COG2451
HOGENOM:HOG000195636 ProtClustDB:CLSN2682223 PANTHER:PTHR10902
EMBL:AC008046 EMBL:AF370549 EMBL:BT006517 EMBL:AY084500
IPI:IPI00523743 PIR:D96492 RefSeq:NP_174951.1 UniGene:At.24952
UniGene:At.48273 ProteinModelPortal:Q9FZH0 SMR:Q9FZH0 STRING:Q9FZH0
PaxDb:Q9FZH0 PRIDE:Q9FZH0 GeneID:840799 KEGG:ath:AT1G41880
GeneFarm:159 TAIR:At1g41880 InParanoid:Q9FZH0 OMA:CAKFRSN
PhylomeDB:Q9FZH0 Genevestigator:Q9FZH0 GermOnline:AT1G41880
Uniprot:Q9FZH0
Length = 111
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 60/108 (55%), Positives = 74/108 (68%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY R G+KR + NQ+PNTSL+ IE NT+E+ +Y GKR ++YKAKTK K
Sbjct: 10 RLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTK------K 63
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
S R IWGKVTRPHG+SG VR+KF NLP MG +VR+ +YPSNI
Sbjct: 64 NGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>TAIR|locus:2007422 [details] [associations]
symbol:AT1G07070 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 EnsemblPlants:AT1G07070.1 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC067971 GO:GO:0022625
KO:K02917 EMBL:AK119060 EMBL:BT004714 EMBL:AY086795 IPI:IPI00526309
PIR:E86205 RefSeq:NP_172188.1 UniGene:At.42314
ProteinModelPortal:Q9LMK0 SMR:Q9LMK0 STRING:Q9LMK0 PaxDb:Q9LMK0
PRIDE:Q9LMK0 GeneID:837218 KEGG:ath:AT1G07070 GeneFarm:219
TAIR:At1g07070 eggNOG:COG2451 HOGENOM:HOG000195636
InParanoid:Q9LMK0 OMA:ISYQRSK PhylomeDB:Q9LMK0
ProtClustDB:CLSN2682223 Genevestigator:Q9LMK0 GermOnline:AT1G07070
PANTHER:PTHR10902 Uniprot:Q9LMK0
Length = 112
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/108 (55%), Positives = 73/108 (67%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY R G+KR + NQ+PNTSL+ +E NT E+ +Y GKR ++YKAKTK K
Sbjct: 11 RLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTK------K 64
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
S R IWGKVTRPHG+SG VRAKF NLP MG +VR+ +YPSNI
Sbjct: 65 NGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>TAIR|locus:2078991 [details] [associations]
symbol:AT3G55750 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247
ProDom:PD012670 PROSITE:PS01105 EnsemblPlants:AT3G55750.1
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AL161667
GO:GO:0022625 KO:K02917 HOGENOM:HOG000195636
ProtClustDB:CLSN2682223 PANTHER:PTHR10902 UniGene:At.24952
UniGene:At.48273 EMBL:AF446895 EMBL:AY052680 EMBL:AY087646
EMBL:Z18517 IPI:IPI00542655 PIR:T47714 RefSeq:NP_191134.1
ProteinModelPortal:P51422 SMR:P51422 STRING:P51422 GeneID:824741
KEGG:ath:AT3G55750 GeneFarm:162 TAIR:At3g55750 InParanoid:P51422
OMA:HRIRVVI PhylomeDB:P51422 Genevestigator:P51422
GermOnline:AT3G55750 Uniprot:P51422
Length = 111
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/108 (55%), Positives = 74/108 (68%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY R G+KR + NQ+PNTSL+ IE NT+E+ +Y GKR ++YKAKTK K
Sbjct: 10 RLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTK------K 63
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
S R IWGKVTRPHG+SG VR+KF NLP MG +VR+ +YPSNI
Sbjct: 64 NGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>RGD|2325092 [details] [associations]
symbol:LOC100359636 "ribosomal protein L35a-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
Pfam:PF01247 ProDom:PD012670 RGD:2325092 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
PANTHER:PTHR10902 OMA:HRIRVVI OrthoDB:EOG4FR0T3 IPI:IPI00392735
RefSeq:XP_002728707.1 RefSeq:XP_003753232.1
ProteinModelPortal:D3ZRV7 Ensembl:ENSRNOT00000045599
GeneID:100359636 KEGG:rno:100359636 UCSC:RGD:2325092 Uniprot:D3ZRV7
Length = 110
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 57/109 (52%), Positives = 75/109 (68%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGK TR HG+SG VRAKF NLPA G ++ +MLYPS I
Sbjct: 63 K-PNKTRVIWGKETRAHGNSGMVRAKFQSNLPAKATGHRICVMLYPSRI 110
>UNIPROTKB|E1BHM9 [details] [associations]
symbol:E1BHM9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
PANTHER:PTHR10902 OMA:CAKFRSN GeneTree:ENSGT00390000016972
EMBL:DAAA02036428 IPI:IPI00906373 Ensembl:ENSBTAT00000015544
Uniprot:E1BHM9
Length = 110
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 55/109 (50%), Positives = 75/109 (68%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++ IF G+KRG +NQ +T+LL IE +++ FY+GKRC + YKAK P
Sbjct: 3 GRLWSKTIFAGYKRGLQNQREHTALLKIEGVYARDETEFYLGKRCAYEYKAKNNTETPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGK+TR HG+SG V AKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKITRAHGNSGMVCAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UNIPROTKB|E1BMJ8 [details] [associations]
symbol:LOC781576 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
PANTHER:PTHR10902 GeneTree:ENSGT00390000016972 EMBL:DAAA02008240
IPI:IPI00826854 RefSeq:XP_003582043.1 RefSeq:XP_003582044.1
RefSeq:XP_003585932.1 RefSeq:XP_003585933.1
ProteinModelPortal:E1BMJ8 Ensembl:ENSBTAT00000043998 GeneID:781576
KEGG:bta:781576 OMA:GERCAYV Uniprot:E1BMJ8
Length = 110
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+KRG RNQ +T+ L IE + F +GK C ++YKAK + P
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTAFLKIEGVYAGGETEFCLGKTCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGK+TR HG+SG VRAKF NLPA +G ++R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKITRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>RGD|1560900 [details] [associations]
symbol:RGD1560900 "similar to ribosomal protein L35a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 RGD:1560900 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00190408
RefSeq:XP_003750919.1 RefSeq:XP_003752397.1 PRIDE:D4A329
Ensembl:ENSRNOT00000049614 GeneID:100911973 KEGG:rno:100911973
OMA:STEAANF Uniprot:D4A329
Length = 110
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 55/109 (50%), Positives = 73/109 (66%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+ +AIF G+KR RNQ + + L IE +++ FY GKRC ++YKA+ + P
Sbjct: 3 GRLWCKAIFAGYKRVLRNQREHMAPLKIEGVYARDETEFYSGKRCAYVYKAQNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K ++ R IWGKVTR HG+SG VRAKF NLPA +G +R+MLYPS I
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHGIRVMLYPSRI 110
>UNIPROTKB|F1M0T2 [details] [associations]
symbol:F1M0T2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
Pfam:PF01247 ProDom:PD012670 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
GeneTree:ENSGT00390000016972 IPI:IPI00198382
Ensembl:ENSRNOT00000041291 OMA:GHRILVM Uniprot:F1M0T2
Length = 107
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 51/108 (47%), Positives = 75/108 (69%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RL+ +AIF G+++G RNQ +T+LL IE +++ FY+GK C ++YKAK + P K
Sbjct: 1 RLWCKAIFAGYRQGLRNQREHTALLKIEGVYARDETEFYLGKGCAYVYKAKNNAVTPGGK 60
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
++ + IWGKVT+ HG+SG VRAKF +LPA +G ++ +MLYPS I
Sbjct: 61 -PNKTKVIWGKVTQAHGNSGMVRAKFRSSLPAKAIGHRILVMLYPSRI 107
>UNIPROTKB|I3LIK0 [details] [associations]
symbol:LOC100516261 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001780 Pfam:PF01247
ProDom:PD012670 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
GeneTree:ENSGT00390000016972 EMBL:CU469011
Ensembl:ENSSSCT00000006639 Uniprot:I3LIK0
Length = 110
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 52/109 (47%), Positives = 73/109 (66%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
G L+ +AIF GFK+G +NQ NT+LL I+ +++ FY+GKRC ++YKAK+ + P
Sbjct: 3 GGLWYKAIFAGFKQGLQNQRENTALLKIDDVYARDETEFYLGKRCAYMYKAKSNTVNPGR 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K K + R WGKVT + +SG VRA F NLPA +G ++ +MLYPS I
Sbjct: 63 KSK-KTRIFWGKVTHANDNSGMVRATFQSNLPAKAIGHRIHVMLYPSRI 110
>POMBASE|SPBC1921.01c [details] [associations]
symbol:rpl35b "60S ribosomal protein L35a (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0019843 "rRNA binding" evidence=ISS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
PomBase:SPBC1921.01c GO:GO:0005730 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
eggNOG:COG2451 HOGENOM:HOG000195636 OMA:ISYQRSK PANTHER:PTHR10902
PIR:T39785 RefSeq:NP_001018813.2 ProteinModelPortal:Q9USX4
STRING:Q9USX4 PRIDE:Q9USX4 EnsemblFungi:SPBC1921.01c.1
GeneID:3361295 KEGG:spo:SPBC1921.01c OrthoDB:EOG4BP4NF
NextBio:20811381 Uniprot:Q9USX4
Length = 108
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 55/108 (50%), Positives = 74/108 (68%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY +A F+R + HP TSL+ IE C++KE+A+FY+GKR F+YK+ KP
Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSN----KP--V 60
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
R S++R IWG V+RPHG+SG VRA+F NLP G +R+MLYPSN+
Sbjct: 61 RGSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
>ASPGD|ASPL0000041158 [details] [associations]
symbol:AN2980 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
EMBL:BN001306 GO:GO:0005840 EMBL:AACD01000051 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
OrthoDB:EOG4BP4NF RefSeq:XP_660584.1 ProteinModelPortal:Q5B900
STRING:Q5B900 EnsemblFungi:CADANIAT00010100 GeneID:2874180
KEGG:ani:AN2980.2 Uniprot:Q5B900
Length = 109
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 57/111 (51%), Positives = 75/111 (67%)
Query: 78 HG-RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKP 136
HG RLY + ++R +R +PNTSL+ I+ + E A FY+GK+ F+Y+AK +E+
Sbjct: 5 HGHRLYVKGRHLSYQRSKRAVNPNTSLIKIDGVDNTEAANFYLGKKVAFVYRAK-REV-- 61
Query: 137 HSKRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
R S +R IWGKVTRPHG+SG VRA+F NLPA G VR+MLYPSNI
Sbjct: 62 ---RGSNIRVIWGKVTRPHGNSGVVRAQFRHNLPAKSFGATVRVMLYPSNI 109
>UNIPROTKB|C9K025 [details] [associations]
symbol:RPL35A "60S ribosomal protein L35a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
EMBL:AC135893 PANTHER:PTHR10902 HGNC:HGNC:10345 IPI:IPI00793102
ProteinModelPortal:C9K025 SMR:C9K025 STRING:C9K025 PRIDE:C9K025
Ensembl:ENST00000442341 ArrayExpress:C9K025 Bgee:C9K025
Uniprot:C9K025
Length = 94
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 51/93 (54%), Positives = 67/93 (72%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK + P
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPA 171
K ++ R IWGKVTR HG+SG VRAKF NLPA
Sbjct: 63 K-PNKTRVIWGKVTRAHGNSGMVRAKFRSNLPA 94
>RGD|6498396 [details] [associations]
symbol:LOC100910496 "60S ribosomal protein L35a-like"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
IPI:IPI00559832 Ensembl:ENSRNOT00000050968 Uniprot:F1M2L1
Length = 105
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 53/105 (50%), Positives = 71/105 (67%)
Query: 84 RAIFTGFKRGQRNQHPNTS-LLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSKRKS 142
+AIF G+KRG NQ +T+ LL +E ++ FY+GKRC ++YKAK + P K +
Sbjct: 2 KAIFAGYKRGLWNQREHTAALLKMEGVYATDETEFYLGKRCAYVYKAKNNTVTPGGK-PN 60
Query: 143 RLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
+ R IWGKVTR HG+SG VRAKF NLP +G ++R+MLYPS I
Sbjct: 61 KTRVIWGKVTRAHGNSGMVRAKFRSNLPEKAIGHRIRVMLYPSRI 105
>POMBASE|SPCP31B10.08c [details] [associations]
symbol:rpl35a "60S ribosomal protein L35a"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 PomBase:SPCP31B10.08c EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:CAKFRSN
OrthoDB:EOG4BP4NF EMBL:AB017603 PIR:T41698 RefSeq:NP_587864.1
ProteinModelPortal:Q9USG6 STRING:Q9USG6 PRIDE:Q9USG6
EnsemblFungi:SPCP31B10.08c.1 GeneID:2539518 KEGG:spo:SPCP31B10.08c
NextBio:20800679 Uniprot:Q9USG6
Length = 108
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 53/108 (49%), Positives = 76/108 (70%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY +A F+R + HP TS++ IE C++KE+A+FY+GKR ++YK+ +K +
Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKS-SKAV----- 60
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
R S++R IWG + RPHG+SG+VRA+F NLPA G +R+MLYPSNI
Sbjct: 61 RGSKIRVIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108
>GENEDB_PFALCIPARUM|PF11_0438 [details] [associations]
symbol:PF11_0438 "Ribosomal protein, putative"
species:5833 "Plasmodium falciparum" [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR001780 Pfam:PF01247
ProDom:PD012670 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0015934 KO:K02917
HOGENOM:HOG000195636 PANTHER:PTHR10902 ProtClustDB:PTZ00041
RefSeq:XP_001348107.1 ProteinModelPortal:Q8IHT9 IntAct:Q8IHT9
MINT:MINT-1637156 PRIDE:Q8IHT9 EnsemblProtists:PF11_0438:mRNA
GeneID:810983 KEGG:pfa:PF11_0438 EuPathDB:PlasmoDB:PF3D7_1142600
OMA:YARDETD Uniprot:Q8IHT9
Length = 140
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 54/113 (47%), Positives = 77/113 (68%)
Query: 75 RLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKEL 134
+L+ RLY + + G+KR QRNQ PN +L++I+ NTK+ A+FYVGKR ++Y+ TK
Sbjct: 34 KLQAVRLYEKGVILGYKRSQRNQDPNFTLISIKNVNTKKHAQFYVGKRVAYVYRT-TKH- 91
Query: 135 KPHSKRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
H K ++ IWGKV R HG+SG +RAKF ++P G +VRI++YPSNI
Sbjct: 92 --HDGVK--IKCIWGKVCRTHGNSGVIRAKFKTHIPPKAFGDRVRILMYPSNI 140
>UNIPROTKB|Q8IHT9 [details] [associations]
symbol:PF11_0438 "60S ribosomal protein L35Ae, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR001780 Pfam:PF01247
ProDom:PD012670 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0015934 KO:K02917
HOGENOM:HOG000195636 PANTHER:PTHR10902 ProtClustDB:PTZ00041
RefSeq:XP_001348107.1 ProteinModelPortal:Q8IHT9 IntAct:Q8IHT9
MINT:MINT-1637156 PRIDE:Q8IHT9 EnsemblProtists:PF11_0438:mRNA
GeneID:810983 KEGG:pfa:PF11_0438 EuPathDB:PlasmoDB:PF3D7_1142600
OMA:YARDETD Uniprot:Q8IHT9
Length = 140
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 54/113 (47%), Positives = 77/113 (68%)
Query: 75 RLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKEL 134
+L+ RLY + + G+KR QRNQ PN +L++I+ NTK+ A+FYVGKR ++Y+ TK
Sbjct: 34 KLQAVRLYEKGVILGYKRSQRNQDPNFTLISIKNVNTKKHAQFYVGKRVAYVYRT-TKH- 91
Query: 135 KPHSKRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
H K ++ IWGKV R HG+SG +RAKF ++P G +VRI++YPSNI
Sbjct: 92 --HDGVK--IKCIWGKVCRTHGNSGVIRAKFKTHIPPKAFGDRVRILMYPSNI 140
>RGD|1597244 [details] [associations]
symbol:H60c "histocompatibility 60c" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 RGD:1597244
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 PANTHER:PTHR10902 IPI:IPI00765073
Ensembl:ENSRNOT00000036970 Uniprot:D3ZFY4
Length = 114
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 54/112 (48%), Positives = 73/112 (65%)
Query: 80 RLYARAI----FTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELK 135
RL+ +A+ F+G+KRG NQ +T+LL IE T+++ FY+GKRC +YK K +
Sbjct: 4 RLWCKAVVRGHFSGYKRGLWNQREHTALLEIEGVYTRDETEFYLGKRCACVYKTKNNTVT 63
Query: 136 PHSKRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
P K ++ R IWGKV R HG+SG VRAKF LPA +G ++R MLYPS I
Sbjct: 64 PGGK-PNKTRVIWGKVNRAHGNSGVVRAKFRSKLPAKAIGHRIRAMLYPSRI 114
>UNIPROTKB|J9P9Q2 [details] [associations]
symbol:J9P9Q2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001780
Pfam:PF01247 ProDom:PD012670 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
GeneTree:ENSGT00390000016972 EMBL:AAEX03004458
Ensembl:ENSCAFT00000015491 Uniprot:J9P9Q2
Length = 110
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 50/109 (45%), Positives = 71/109 (65%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHS 138
GRL+++AIF G+K G +NQ +T+ L I+ ++ FY+GK+C ++Y+AK + P
Sbjct: 3 GRLWSKAIFAGYKWGLQNQREHTAPLKIKGVYAPDETEFYLGKQCAYVYRAKNNIVTPGG 62
Query: 139 KRKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
K + R IWGKVT HGSSG V KF NLP +G ++R+MLYPS I
Sbjct: 63 K-PDKTRVIWGKVTHAHGSSGMVHTKFRSNLPGKAIGHRIRVMLYPSRI 110
>SGD|S000006064 [details] [associations]
symbol:RPL33A "Ribosomal 60S subunit protein L33A"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA]
InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
PROSITE:PS01105 SGD:S000006064 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 PDB:4B6A PDBsum:4B6A InterPro:IPR009000
SUPFAM:SSF50447 EMBL:U43703 GO:GO:0022625 KO:K02917
HOGENOM:HOG000195636 OMA:ISYQRSK PANTHER:PTHR10902 PDB:3IZS
PDB:3U5E PDB:3U5I PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I
OrthoDB:EOG4BP4NF EMBL:X57969 EMBL:Z73499 PIR:S18431
RefSeq:NP_015182.1 ProteinModelPortal:P05744 SMR:P05744
IntAct:P05744 STRING:P05744 PeptideAtlas:P05744
EnsemblFungi:YPL143W GeneID:855960 KEGG:sce:YPL143W
GeneTree:ENSGT00390000016972 NextBio:980759 Genevestigator:P05744
GermOnline:YPL143W Uniprot:P05744
Length = 107
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 54/108 (50%), Positives = 72/108 (66%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY + ++R +R +PN SL+ IE T +DA+FY+GKR ++Y+A +KE+
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRA-SKEV----- 59
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
R S++R +WGKVTR HG+SG VRA F NLPA G VRI LYPSNI
Sbjct: 60 RGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>SGD|S000005760 [details] [associations]
symbol:RPL33B "Ribosomal 60S subunit protein L33B"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
SGD:S000005760 EMBL:BK006948 GO:GO:0003735 GO:GO:0002181
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 RefSeq:NP_014877.3
GeneID:854409 KEGG:sce:YOR234C KO:K02917 RefSeq:NP_014880.3
GeneID:854412 KEGG:sce:YOR237W eggNOG:COG2451 HOGENOM:HOG000195636
PANTHER:PTHR10902 OMA:FYVGKRC OrthoDB:EOG4BP4NF
GeneTree:ENSGT00390000016972 EMBL:L23923 EMBL:Z75142 PIR:S44069
ProteinModelPortal:P41056 SMR:P41056 IntAct:P41056 STRING:P41056
PaxDb:P41056 PeptideAtlas:P41056 EnsemblFungi:YOR234C
NextBio:976598 Genevestigator:P41056 GermOnline:YOR234C
Uniprot:P41056
Length = 107
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 53/108 (49%), Positives = 72/108 (66%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY + ++R +R +PN SL+ IE T ++A+FY+GKR ++Y+A +KE+
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRA-SKEV----- 59
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
R S++R +WGKVTR HG+SG VRA F NLPA G VRI LYPSNI
Sbjct: 60 RGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>UNIPROTKB|G4MRJ2 [details] [associations]
symbol:MGG_09927 "60S ribosomal protein L33-B"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR001780 InterPro:IPR018266
Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CM001231 GO:GO:0043581
InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 PANTHER:PTHR10902
RefSeq:XP_003710027.1 ProteinModelPortal:G4MRJ2
EnsemblFungi:MGG_09927T0 GeneID:2680897 KEGG:mgr:MGG_09927
Uniprot:G4MRJ2
Length = 109
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 50/108 (46%), Positives = 68/108 (62%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
RLY + ++R + P TSL+ IE + A FY+GK+ ++Y+A+ KE+
Sbjct: 8 RLYVKGRHLSYQRSRHTNRPETSLIKIEGVDDTNAANFYLGKKVAYVYRAQ-KEV----- 61
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
R +++R IWGKVTRPHG+SG VRAKF LP G VRIMLYPS+I
Sbjct: 62 RGTKIRVIWGKVTRPHGNSGVVRAKFTTPLPTRSFGASVRIMLYPSSI 109
>DICTYBASE|DDB_G0270424 [details] [associations]
symbol:rpl35a "S60 ribosomal protein L35a"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001780 Pfam:PF01247
ProDom:PD012670 PROSITE:PS01105 dictyBase:DDB_G0270424
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 InterPro:IPR009000
SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451 PANTHER:PTHR10902
OMA:FYVGKRC RefSeq:XP_646794.1 HSSP:Q8TZV6
ProteinModelPortal:Q55BN7 STRING:Q55BN7 PRIDE:Q55BN7
EnsemblProtists:DDB0231153 GeneID:8617767 KEGG:ddi:DDB_G0270424
ProtClustDB:PTZ00041 Uniprot:Q55BN7
Length = 105
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 46/108 (42%), Positives = 67/108 (62%)
Query: 80 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 139
++Y++ + G++R Q Q+PN SL+ IE ++ED+ FY+GK+ + K P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGH 62
Query: 140 RKSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 187
+ S WGK+ + HGSSG V+A+F RNLP MG VR+MLYPSNI
Sbjct: 63 KIS-----WGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
>UNIPROTKB|F8WB72 [details] [associations]
symbol:RPL35A "60S ribosomal protein L35a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001780 Pfam:PF01247
ProDom:PD012670 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC135893 PANTHER:PTHR10902
HGNC:HGNC:10345 IPI:IPI00926288 ProteinModelPortal:F8WB72
SMR:F8WB72 Ensembl:ENST00000439255 ArrayExpress:F8WB72 Bgee:F8WB72
Uniprot:F8WB72
Length = 57
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAK 130
GRL+++AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAK 54
>UNIPROTKB|F8WBS5 [details] [associations]
symbol:RPL35A "60S ribosomal protein L35a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001780 Pfam:PF01247
ProDom:PD012670 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC135893 PANTHER:PTHR10902
HGNC:HGNC:10345 IPI:IPI00926495 ProteinModelPortal:F8WBS5
SMR:F8WBS5 Ensembl:ENST00000429437 ArrayExpress:F8WBS5 Bgee:F8WBS5
Uniprot:F8WBS5
Length = 55
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 79 GRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAK 130
GRL+++AIF G+KRG RNQ +T+LL IE +++ FY+GKRC ++YKAK
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAK 54
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.137 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 187 131 0.00091 102 3 11 22 0.45 30
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 570 (61 KB)
Total size of DFA: 124 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 12.45u 0.08s 12.53t Elapsed: 00:00:03
Total cpu time: 12.46u 0.08s 12.54t Elapsed: 00:00:05
Start: Thu Aug 15 12:49:40 2013 End: Thu Aug 15 12:49:45 2013