BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4332
(188 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 9/145 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG +KI DF D++S+DYYRV +T LPIRWM ES+ RKFTT+SDVWSF
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV LWEI + +P+ L++ EV+E I+ G + P K++ D+M CW+R
Sbjct: 222 GVILWEIFTYGK-QPWFQLSNTEVIECITQ-----GRVLERPRV-CPKEVYDVMLGCWQR 274
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPP 185
P +R + EI+ L LG P
Sbjct: 275 EPQQRLNIKEIYKILH--ALGKATP 297
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +KI DF D++S+DYYRV T LPIRWM ES+ RKFTT+SDVWSF
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 246
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV LWEI + +P+ L++ E ++ I+ G + P ++ +M CW+R
Sbjct: 247 GVVLWEIFTYGK-QPWYQLSNTEAIDCITQ-----GRELERPRA-CPPEVYAIMRGCWQR 299
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPM 186
P +R S ++H LQ L PP+
Sbjct: 300 EPQQRHSIKDVHARLQ--ALAQAPPV 323
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ + S +K + +NCLVG+ +KI+DF +++S+DYY+ N ++PIRWM
Sbjct: 186 GMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
ES+ ++TT+SDVW++GV LWEI + +PY G+ EV+ + DG + P
Sbjct: 246 ESIFYNRYTTESDVWAYGVVLWEIFSYGL-QPYYGMAHEEVI-----YYVRDGNILACPE 299
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
++ +LM CW + P +RPSF IH LQR
Sbjct: 300 -NCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 11/147 (7%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +KI DF D++S+DYYRV +T LPIRWM ES+ RKFTT+SDVWS
Sbjct: 157 RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 216
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
GV LWEI + +P+ L++ EV+E I+ L P+T +++ +LM CW+
Sbjct: 217 GVVLWEIFTYGK-QPWYQLSNNEVIECITQGRV-------LQRPRTCPQEVYELMLGCWQ 268
Query: 160 RSPTERPSFTEIHLFLQRKNLGYVPPM 186
R P R + IH LQ NL P+
Sbjct: 269 REPHMRKNIKGIHTLLQ--NLAKASPV 293
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +KI DF D++S+DYYRV T LPIRWM ES+ RKFTT+SDVWSF
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 223
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV LWEI + +P+ L++ E ++ I+ G + P ++ +M CW+R
Sbjct: 224 GVVLWEIFTYGK-QPWYQLSNTEAIDCITQ-----GRELERPRA-CPPEVYAIMRGCWQR 276
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPM 186
P +R S ++H LQ L PP+
Sbjct: 277 EPQQRHSIKDVHARLQ--ALAQAPPV 300
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +KI DF D++S+DYYRV T LPIRWM ES+ RKFTT+SDVWSF
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 217
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV LWEI + +P+ L++ E ++ I+ G + P ++ +M CW+R
Sbjct: 218 GVVLWEIFTYGK-QPWYQLSNTEAIDCITQ-----GRELERPRA-CPPEVYAIMRGCWQR 270
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPM 186
P +R S ++H LQ L PP+
Sbjct: 271 EPQQRHSIKDVHARLQ--ALAQAPPV 294
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D++ +DYYR LP+RWMA
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 251
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 252 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D++ +DYYR LP+RWMA
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 253
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 254 QPDNCPERVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D++ +DYYR LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 116 bits (291), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D++ +DYYR LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D++ + YYR LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 220 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 272 YNPKMRPSFLEI 283
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 157 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 216
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 217 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 268
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 269 YNPKMRPSFLEI 280
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 189 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 248
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 249 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 300
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 301 YNPKMRPSFLEI 312
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 220 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 272 YNPKMRPSFLEI 283
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 154 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 214 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 265
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 266 YNPKMRPSFLEI 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 221 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 273 YNPKMRPSFLEI 284
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 158 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 217
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 218 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 269
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 270 YNPKMRPSFLEI 281
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 227 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 279 YNPKMRPSFLEI 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 113 bits (283), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 227 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 279 YNPKMRPSFLEI 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC V + F +KI DF D++ +DYYR LP+RWM+ ES++ FTT SDVWSF
Sbjct: 154 RNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D +L+LM CW+
Sbjct: 214 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLLELMRMCWQ 265
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 266 YNPKMRPSFLEI 277
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D+ +D R LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D+ +D R LP+RWMA
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 249
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 250 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 279
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
+G+ + + KK + +NC+V F +KI DF D+ +D R LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES++ FTT SD+WSFGV LWEI +LA +PY+GL++ +VL+ + D G YL
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
P + + DLM CW+ +P RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D+ +D R LP+RWM+ ES++ FTT SDVWSF
Sbjct: 152 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 211
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D +L+LM CW+
Sbjct: 212 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLLELMRMCWQ 263
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 264 YNPKMRPSFLEI 275
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NC+V + F +KI DF D+ +D R LP+RWM+ ES++ FTT SDVWSF
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
GV LWEI LA +PY+GL++ +VL + E L P D+L +LM CW+
Sbjct: 221 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 160 RSPTERPSFTEI 171
+P RPSF EI
Sbjct: 273 YNPKMRPSFLEI 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 103 bits (256), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ S K +N LV K +KISD +++++DYY++ N+ LPIRWMA
Sbjct: 157 GMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ KF+ SD+WS+GV LWE+ + +PY G ++ +V+E I + LP
Sbjct: 217 EAIMYGKFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRNRQV-------LPC 268
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIH 172
P + LM ECW P+ RP F +IH
Sbjct: 269 PDDCPAWVYALMIECWNEFPSRRPRFKDIH 298
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 103 bits (256), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ S K +N LV K +KISD +++++DYY++ N+ LPIRWMA
Sbjct: 140 GMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 199
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ KF+ SD+WS+GV LWE+ + +PY G ++ +V+E I + LP
Sbjct: 200 EAIMYGKFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRNRQV-------LPC 251
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIH 172
P + LM ECW P+ RP F +IH
Sbjct: 252 PDDCPAWVYALMIECWNEFPSRRPRFKDIH 281
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 147 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 205
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 206 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 264
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 265 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 306
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 126 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 185 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 243
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 244 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 285
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 146 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 204
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 205 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 263
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 264 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 305
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 127 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 186 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 244
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 245 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 187 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 187 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 125 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 183
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 184 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 242
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 243 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 284
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 120 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 178
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 179 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 237
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 238 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 279
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 123 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+YY VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 240
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 241 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 282
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ S + + +NC++ + + ++DF ++S DYYR + LP++W+A
Sbjct: 149 GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
ES+ +T SDVW+FGVT+WEI+ + PY G+ + E+ + + G + P
Sbjct: 209 ESLADNLYTVHSDVWAFGVTMWEIMTRGQ-TPYAGIENAEI-----YNYLIGGNRLKQP- 261
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQ 176
P+ +++ DLM +CW P +RPSFT + + L+
Sbjct: 262 PECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV--HDNTSL 76
L+ G+E+ + +K + +NC++ + F +K++DF D+ +YY V H + L
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 77 PIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
P++W A ES++ +FTTKSDVWSFGV LWE+L PY + +++H A
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGA-PPYRHIDPF----DLTHFLAQGR 245
Query: 137 EFIYLPTPQTTKDIL-DLMNECWKRSPTERPSF 168
LP P+ D L +M +CW+ P RP+F
Sbjct: 246 R---LPQPEYCPDSLYQVMQQCWEADPAVRPTF 275
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 9/155 (5%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ S + + +NC++ + ++DF ++S DYYR +P++W+A
Sbjct: 159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
ES+ R +T+KSDVW+FGVT+WEI PY G+ + E+ + + H H L
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRG-MTPYPGVQNHEMYDYLLHGHR-------LKQ 270
Query: 144 PQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
P+ D L ++M CW+ P +RP+F+ + L L++
Sbjct: 271 PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+++ S K+ + +N LVG+ + KI+DF + Y LP+RWMA
Sbjct: 151 GMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI 207
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
ES+ +TT SDVWS+GV LWEI++L PY G+T E+ E + + L
Sbjct: 208 ESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEK 259
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
P D + DLM +CW+ P ERPSF +I + L R
Sbjct: 260 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 294
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+++ S K+ + +N LVG+ + KI+DF + Y LP+RWMA
Sbjct: 144 GMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI 200
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
ES+ +TT SDVWS+GV LWEI++L PY G+T E+ E + + L
Sbjct: 201 ESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEK 252
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
P D + DLM +CW+ P ERPSF +I + L R
Sbjct: 253 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 287
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+++ S K+ + +N LVG+ + KI+DF + Y LP+RWMA
Sbjct: 154 GMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI 210
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
ES+ +TT SDVWS+GV LWEI++L PY G+T E+ E + + L
Sbjct: 211 ESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEK 262
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
P D + DLM +CW+ P ERPSF +I + L R
Sbjct: 263 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 344 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 402
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 403 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 451
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 452 CWQWNPSDRPSFAEIH 467
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 386 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 444
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 445 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 493
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 494 CWQWNPSDRPSFAEIH 509
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 347 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 405
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 406 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 454
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 455 CWQWNPSDRPSFAEIH 470
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 144 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 202
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 203 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 251
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 252 CWQWNPSDRPSFAEIH 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 153 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 211
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 212 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 260
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 261 CWQWNPSDRPSFAEIH 276
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 142 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 201 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 249
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ KF+ KSDVW+F
Sbjct: 142 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 201 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 249
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G+++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 127 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 186 EXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 244
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 245 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 286
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 187 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
++ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 304
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 305 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 346
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 133 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 191
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
++ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 192 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 250
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 251 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
++ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 187 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
++ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 187 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 129 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 187
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
++ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 188 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 246
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 247 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G++ + KK + +NC++ +KF +K++DF DM+
Sbjct: 126 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
++ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 185 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 243
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 244 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 285
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
H P +L L K G++ + KK + +NC++ +KF +K++DF DM
Sbjct: 129 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDK 187
Query: 66 DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
++ VH+ T LP++WMA ES++ +KFTTKSDVWSFGV LWE++ PY + +
Sbjct: 188 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 246
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ L+ L + Y P P + ++M +CW RPSF+E+
Sbjct: 247 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 288
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 168 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 226
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 227 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 279
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 280 DPSRRPRFTEL 290
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 203
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 204 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 256
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 257 DPSRRPRFTEL 267
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 143 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 201
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 202 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 254
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 255 DPSRRPRFTEL 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 142 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 200
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 201 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 253
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 254 DPSRRPRFTEL 264
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 140 RNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D + H PI+W A ES+ KF+ KSDVW+F
Sbjct: 138 RNCLVGENHLVKVADFGL-SRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 101 GVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
GV LWEI PY G+ E+LE + +G + + +LM C
Sbjct: 197 GVLLWEIATYGM-SPYPGIDPSQVYELLEKDYRMERPEG---------CPEKVYELMRAC 246
Query: 158 WKRSPTERPSFTEIH 172
W+ +P++RPSF EIH
Sbjct: 247 WQWNPSDRPSFAEIH 261
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 137 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 196 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 248
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 249 DPSRRPRFTEL 259
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 520 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 578
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 579 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 631
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 632 DPSRRPRFTEL 642
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S YY+ LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 520 RNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 578
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 579 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 631
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 632 DPSRRPRFTEL 642
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D H PI+W A ES+ KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y H PI+W A ES+ F+ KSDVW+F
Sbjct: 159 RNCLVGENHVVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL ++LE + +G + +LM
Sbjct: 218 GVLLWEIATYGM-SPYPGI-DLSQVYDLLEKGYRMEQPEG---------CPPKVYELMRA 266
Query: 157 CWKRSPTERPSFTEIH 172
CWK SP +RPSF E H
Sbjct: 267 CWKWSPADRPSFAETH 282
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D H PI+W A ES+ KF+ KSDVW+F
Sbjct: 141 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 200 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 248
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 249 CWQWNPSDRPSFAEIH 264
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D H PI+W A ES+ KF+ KSDVW+F
Sbjct: 138 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 101 GVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
GV LWEI PY G+ E+LE + +G + + +LM C
Sbjct: 197 GVLLWEIATYGM-SPYPGIDPSQVYELLEKDYRMERPEG---------CPEKVYELMRAC 246
Query: 158 WKRSPTERPSFTEIH 172
W+ +P++RPSF EIH
Sbjct: 247 WQWNPSDRPSFAEIH 261
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D H PI+W A ES+ KF+ KSDVW+F
Sbjct: 138 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 101 GVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
GV LWEI PY G+ E+LE + +G + + +LM C
Sbjct: 197 GVLLWEIATYGM-SPYPGIDPSQVYELLEKDYRMERPEG---------CPEKVYELMRAC 246
Query: 158 WKRSPTERPSFTEIH 172
W+ +P++RPSF EIH
Sbjct: 247 WQWNPSDRPSFAEIH 261
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y PI+W A ES+ KF+ KSDVW+F
Sbjct: 141 RNCLVGENHLVKVADFGL-SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 200 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 248
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 249 CWQWNPSDRPSFAEIH 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30 LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
L++ C+ D +NCLVG+ IK+SDF + D Y T P++W + E
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
++++KSDVWSFGV +WE+ + + PYE ++ EV+E+IS G +Y P +T
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 251
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
+ +MN CWK P +RP+F+ +
Sbjct: 252 H-VYQIMNHCWKERPEDRPAFSRL 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ +K++DF S + + D Y PI+W A ES+ KF+ KSDVW+F
Sbjct: 142 RNCLVGENHLVKVADFGL-SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
GV LWEI PY G+ DL E+LE + +G + + +LM
Sbjct: 201 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 249
Query: 157 CWKRSPTERPSFTEIH 172
CW+ +P++RPSF EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 203 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 315
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEI 171
T ++ +M +CW P++RP+F ++
Sbjct: 316 SNCTNELYMMMRDCWHAVPSQRPTFKQL 343
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30 LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
L++ C+ D +NCLVG+ IK+SDF + D Y T P++W + E
Sbjct: 119 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
++++KSDVWSFGV +WE+ + + PYE ++ EV+E+IS G +Y P +T
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 231
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
+ +MN CWK P +RP+F+ +
Sbjct: 232 H-VYQIMNHCWKERPEDRPAFSRL 254
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30 LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
L++ C+ D +NCLVG+ IK+SDF + D Y T P++W + E
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
++++KSDVWSFGV +WE+ + + PYE ++ EV+E+IS G +Y P +T
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 229
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
+ +MN CWK P +RP+F+ +
Sbjct: 230 H-VYQIMNHCWKERPEDRPAFSRL 252
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 154 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 213
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D
Sbjct: 214 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 266
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 267 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 300
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 221
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D P+
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 275
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 276 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 221
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 274
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 275 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 151 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 210
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D
Sbjct: 211 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 263
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 264 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 297
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 221
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 274
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 275 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 147 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D P+
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 260
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 261 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ DYY+ N LP++WMA
Sbjct: 155 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 214
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D P+
Sbjct: 215 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 268
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 269 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 301
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLVG+ IK+SDF + D Y T P++W + E ++++KSDVWSF
Sbjct: 132 RNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WE+ + + PYE ++ EV+E+IS G +Y P +T + +MN CWK
Sbjct: 191 GVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLASTH-VYQIMNHCWKE 243
Query: 161 SPTERPSFTEI 171
P +RP+F+ +
Sbjct: 244 RPEDRPAFSRL 254
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30 LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
L++ C+ D +NCLVG+ IK+SDF + D Y T P++W + E
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
++++KSDVWSFGV +WE+ + + PYE ++ EV+E+IS G +Y P +T
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 232
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
+ +MN CW+ P +RP+F+ +
Sbjct: 233 H-VYQIMNHCWRERPEDRPAFSRL 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30 LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
L++ C+ D +NCLVG+ IK+SDF + D Y T P++W + E
Sbjct: 122 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
++++KSDVWSFGV +WE+ + + PYE ++ EV+E+IS G +Y P +T
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 234
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
+ +MN CW+ P +RP+F+ +
Sbjct: 235 H-VYQIMNHCWRERPEDRPAFSRL 257
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 156 GMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 215
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 216 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 268
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 269 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 302
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 215 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 275 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMDK------P 327
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 328 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 158 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 217
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 218 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 270
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 271 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 304
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + DYY+ N LP++WMA
Sbjct: 161 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 220
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 221 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 273
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 274 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 307
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + ++I+DF D+ + DYY+ N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 393 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 452 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 504
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 505 PEERPTFEYLQAFLE 519
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 141 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 200 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 252
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 253 PEERPTFEYLQAFLE 267
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 177 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 236
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
+T +SDVWS+G+ LWEI +L + PY G+ ++ + + DG + P K+I
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 290
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
+M CW PT RP+F +I FLQ +
Sbjct: 291 YSIMQACWALEPTHRPTFQQICSFLQEQ 318
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 261
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 262 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 7 RPQASNLAVVPLLR----NKNGVEHSSLKKKCIKIFDF--KNCLVGKKFEIKISDFATDS 60
R + + L V LL+ G+E+ L+ KC D +NCLV +K +KISDF
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEY--LESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 61 DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT 120
+ Y +P++W A E++ +++++SDVWSFG+ LWE +L PY L+
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS-PYPNLS 320
Query: 121 DLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQ 176
+ + E + G LP P+ D + LM +CW P +RPSF+ I+ LQ
Sbjct: 321 NQQTREFVE----KGGR---LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 189 GMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 247
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 248 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 135 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 194 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 246
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 247 PEERPTFEYLQAFLE 261
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 137 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 196 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 248
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 249 PEERPTFEYLQAFLE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 133 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 191
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 192 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 244
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 245 PEERPTFEYLQAFLE 259
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 185 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 244
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
+T +SDVWS+G+ LWEI +L + PY G+ ++ + + DG + P K+I
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 298
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
+M CW PT RP+F +I FLQ +
Sbjct: 299 YSIMQACWALEPTHRPTFQQICSFLQEQ 326
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 261
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 262 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 246
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 247 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 120 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 179
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 180 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 238
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 239 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 287
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 261
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 262 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 246
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 247 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 145 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 204
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 205 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 263
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 264 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 312
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 310 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 369 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 421
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 422 PEERPTFEYLQAFLE 436
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 155 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 214
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 215 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 273
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 274 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 322
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 169 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 228
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 287
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 288 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 336
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 310 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 369 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 421
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 422 PEERPTFEYLQAFLE 436
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 146 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 205
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 206 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 264
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 265 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 313
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 310 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 369 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 421
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 422 PEERPTFEYLQAFLE 436
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
+T +SDVWS+G+ LWEI +L + PY G+ ++ + + DG + P K+I
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 296
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
+M CW PT RP+F +I FLQ +
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQEQ 324
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ + +KI DF D++ + Y +T LP++WMA ES+ +
Sbjct: 218 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKI 277
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKD 149
++TKSDVWS+GV LWEI +L PY G+ E + S L E + + P+ +T +
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLG-GSPYPGVQMDE--DFCSRLR----EGMRMRAPEYSTPE 330
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
I +M +CW R P ERP F E+
Sbjct: 331 IYQIMLDCWHRDPKERPRFAEL 352
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 247
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 248 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 135 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 194
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 195 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 253
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 254 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 302
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
+T +SDVWS+G+ LWEI +L + PY G+ ++ + + DG + P K+I
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 296
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
+M CW PT RP+F +I FLQ +
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQEQ 324
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 171 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 230
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
+T +SDVWS+G+ LWEI +L + PY G+ ++ + + DG + P K+I
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 284
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
+M CW PT RP+F +I FLQ +
Sbjct: 285 YSIMQACWALEPTHRPTFQQICSFLQEQ 312
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5 RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
R RP Q S+LA++ LL G ++ + +NCL+ G KI DF
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 57 ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
D++ + YYR LP++WM E+ FT+K+D WSFGV LWEI +L + PY
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 247
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++ EVLE ++ D P + +M +CW+ P +RP+F I
Sbjct: 248 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 179 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 238
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
+T +SDVWS+G+ LWEI +L + PY G+ ++ + + DG + P K+I
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 292
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
+M CW PT RP+F +I FLQ +
Sbjct: 293 YSIMQACWALEPTHRPTFQQICSFLQEQ 320
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
G+++ + K + +N LV + ++KISDF D++ D Y +P++WMA
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMA 220
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES+ +TT+SDVWSFGV LWEI+ L + PY G+ E L N+ G + P
Sbjct: 221 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGN-PYPGIPP-ERLFNL----LKTGHRMERP 274
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
++++ LM +CWK+ P +RP F +I L++
Sbjct: 275 D-NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF M S + LPI+WMA ES+ R+FT+ SDVW F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +WEIL + +P++G+ + +V+ I ++GE + +P P + LM +CW
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + Y PI+W A E+ +FT KSDVWSFG
Sbjct: 311 NILVGENLVCKVADFGL-GRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 369
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 370 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 422
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 423 PEERPTFEYLQAFLE 437
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + + PI+W A E+ +FT KSDVWSFG
Sbjct: 141 NILVGENLVCKVADFGL-ARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 200 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 252
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 253 PEERPTFEYLQAFLE 267
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + PI+W A E+ +FT KSDVWSFG
Sbjct: 134 NILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 192
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 193 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 245
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 246 PEERPTFEYLQAFLE 260
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + KK + +N LV + +KI+DF D+ D + N LP++WMA
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAP 221
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV LWEI L PY G+ E+ + + H D P+
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 275
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 276 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG+ K++DF + + + PI+W A E+ +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L E+ R PY G+ + EVL+ + + G + P P+ + + DLM +CW++
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 256 PEERPTFEYLQAFLE 270
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF + DYY+ T LPI+WM+ ES+ R+FTT SDVW F
Sbjct: 154 RNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASDVWMF 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
V +WEIL+ + +P+ L + +V I L D LP P +L LM CW
Sbjct: 213 AVCMWEILSFGK-QPFFWLENKDV---IGVLEKGD----RLPKPDLCPPVLYTLMTRCWD 264
Query: 160 RSPTERPSFTEI 171
P++RP FTE+
Sbjct: 265 YDPSDRPRFTEL 276
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 7 RPQASNLAVVPLLR----NKNGVEHSSLKKKCIKIFDF--KNCLVGKKFEIKISDFATDS 60
R + + L V LL+ G+E+ L+ KC D +NCLV +K +KISDF
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEY--LESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 61 DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT 120
+ +P++W A E++ +++++SDVWSFG+ LWE +L PY L+
Sbjct: 262 EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS-PYPNLS 320
Query: 121 DLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQ 176
+ + E + G LP P+ D + LM +CW P +RPSF+ I+ LQ
Sbjct: 321 NQQTREFVE----KGGR---LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF + DYY+ T LPI+WM+ ES+ R+FTT SDVW F
Sbjct: 138 RNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASDVWMF 196
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
V +WEIL+ + +P+ L + +V I L D LP P +L LM CW
Sbjct: 197 AVCMWEILSFGK-QPFFWLENKDV---IGVLEKGDR----LPKPDLCPPVLYTLMTRCWD 248
Query: 160 RSPTERPSFTEI 171
P++RP FTE+
Sbjct: 249 YDPSDRPRFTEL 260
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +K+ DF + DYY+ T LPI+WM+ ES+ R+FTT SDVW F
Sbjct: 142 RNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASDVWMF 200
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
V +WEIL+ + +P+ L + +V I L D LP P +L LM CW
Sbjct: 201 AVCMWEILSFGK-QPFFWLENKDV---IGVLEKGD----RLPKPDLCPPVLYTLMTRCWD 252
Query: 160 RSPTERPSFTEI 171
P++RP FTE+
Sbjct: 253 YDPSDRPRFTEL 264
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 263
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 316
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 317 MYQTMLDCWHGEPSQRPTFSEL 338
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E + +K + +N L+ +K +KI DF D++ Y + LP++WMA
Sbjct: 156 GMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAP 215
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLP 142
E++ R +T +SDVWSFGV LWEI +L PY G+ D E + +G + P
Sbjct: 216 ETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFXRRLK-----EGTRMRAP 269
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI 171
TT ++ M +CW P++RP+F+E+
Sbjct: 270 D-YTTPEMYQTMLDCWHGEPSQRPTFSEL 297
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E + +K + +N L+ +K +KI DF D++ Y + LP++WMA
Sbjct: 156 GMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 215
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLP 142
E++ R +T +SDVWSFGV LWEI +L PY G+ D E + +G + P
Sbjct: 216 ETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAP 269
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI 171
TT ++ M +CW P++RP+F+E+
Sbjct: 270 D-YTTPEMYQTMLDCWHGEPSQRPTFSEL 297
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LVG KI+DF + + + PI+W A E+ +FT KSDVWSFG
Sbjct: 135 NILVGNGLICKIADFGL-ARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
+ L E++ R PY G+ + EVLE + + +P PQ L +LM CWK+
Sbjct: 194 ILLTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPISLHELMIHCWKK 245
Query: 161 SPTERPSFTEIHLFLQ 176
P ERP+F + FL+
Sbjct: 246 DPEERPTFEYLQSFLE 261
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
G+++ + K + +N LV + ++KISDF D++ D +P++WMA
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
ES+ +TT+SDVWSFGV LWEI+ L + PY G+ E L N+ G + P
Sbjct: 221 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGN-PYPGIPP-ERLFNL----LKTGHRMERP 274
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
++++ LM +CWK+ P +RP F +I L++
Sbjct: 275 D-NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 169 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 228
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 281
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 282 MYQTMLDCWHGEPSQRPTFSEL 303
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 212 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 271
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 324
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSEL 346
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 219 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 278
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 331
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSEL 353
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 226
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 217 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 276
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 329
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSEL 351
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 11 SNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
S L +V +LR G+++ + + +N LV K+SDF S + D
Sbjct: 145 SVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL-SRVLEDDPEA 203
Query: 70 VHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLEN 127
+ + +PIRW A E++ RKFT+ SDVWSFG+ +WE++ RPY L++ EV++
Sbjct: 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG-ERPYWELSNHEVMKA 262
Query: 128 ISHLHADDGEFIYLPTPQTT-KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
I +DG LPTP I LM +CW++ RP F +I L +
Sbjct: 263 I-----NDG--FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR G+ + + + +N LV K+SDF S +
Sbjct: 137 KHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGL-SRVI 195
Query: 64 SSDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D V+ T +P+RW A E+++ RKFT+ SDVWS+G+ +WE+++ RPY +++
Sbjct: 196 EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-ERPYWDMSN 254
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ I E LP P L LM +CW++ ERP F +I L +
Sbjct: 255 QDVIKAIE-------EGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDK 304
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV + ++KISDF D++ D +P++WMA ES+ +TT+SDVWSF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV LWEI+ L + PY G+ E L N+ G + P ++++ LM +CWK+
Sbjct: 239 GVLLWEIVTLGGN-PYPGIPP-ERLFNL----LKTGHRMERPD-NCSEEMYRLMLQCWKQ 291
Query: 161 SPTERPSFTEIHLFLQR 177
P +RP F +I L++
Sbjct: 292 EPDKRPVFADISKDLEK 308
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ Y + LP++WMA E++ R
Sbjct: 210 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 269
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 322
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSEL 344
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ + +K + +N LV + +KI+DF D+ + D + N LP++WMA
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP 228
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 24 GVEHSSLKKKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
G+E+ + +KCI + +N LV + +KI+DF D+ + D + N LP++WMA
Sbjct: 169 GMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMA 227
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
E++ R +T +SDVWSFGV +WEI L PY G+ E+ + + H D
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------K 280
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
T ++ +M +CW P++RP+F ++ L R
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + D +PI+WMA E + RKFT +SDVWS+
Sbjct: 169 RNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 228
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + + GE + P P T D+ +M +CW
Sbjct: 229 GVTIWELMTFG-GKPYDGIPTREIPDLL-----EKGERLPQP-PICTIDVYMVMVKCWMI 281
Query: 161 SPTERPSFTEIHLFLQR 177
RP F E+ R
Sbjct: 282 DADSRPKFKELAAEFSR 298
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 499 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 558
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 559 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 611
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 612 YDVENRPGFAAVELRLR 628
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 498 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 557
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 558 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 610
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 611 YDVENRPGFAAVELRLR 627
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 24/163 (14%)
Query: 41 KNCLVGKKFEIKISDFATDS--DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVW 98
+N LV +KI+DF D+ ++Y+ D +PI+WMA ES+ R+FT +SDVW
Sbjct: 148 RNVLVKSPNHVKITDFGLARLLDIDETEYH--ADGGKVPIKWMALESILRRRFTHQSDVW 205
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S+GVT+WE++ +PY+G+ E+ + + + GE + P P T D+ +M +CW
Sbjct: 206 SYGVTVWELMTFG-AKPYDGIPAREIPDLL-----EKGERLPQP-PICTIDVYMIMVKCW 258
Query: 159 KRSPTERPSFTEI-------------HLFLQRKNLGYVPPMNS 188
RP F E+ + +Q ++LG P++S
Sbjct: 259 MIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDLGPASPLDS 301
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + D +PI+WMA E + RKFT +SDVWS+
Sbjct: 146 RNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + + GE + P P T D+ +M +CW
Sbjct: 206 GVTIWELMTFG-GKPYDGIPTREIPDLL-----EKGERLPQP-PICTIDVYMVMVKCWMI 258
Query: 161 SPTERPSFTEIHLFLQR 177
RP F E+ R
Sbjct: 259 DADSRPKFKELAAEFSR 275
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 141 NILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
+ L EI+ R PY G+++ EV+ + + +P P+ +++ ++M CWK
Sbjct: 200 ILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKN 251
Query: 161 SPTERPSFTEIHLFL 175
P ERP+F I L
Sbjct: 252 RPEERPTFEYIQSVL 266
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4 LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
+RHR Q L + + ++ +E+ K+ + +NCLV + +K+SDF S
Sbjct: 98 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 154
Query: 63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D Y + P+RW E + KF++KSD+W+FGV +WEI +L + PYE T+
Sbjct: 155 VLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 213
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
E E+I+ G +Y P + K + +M CW ERP+F
Sbjct: 214 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 253
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+NCLV + +K+SDF + D Y T P++W A E K+++KSDVW+F
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
G+ +WE+ +L + PY+ T+ EV+ +S H L P D I +M CW
Sbjct: 192 GILMWEVFSLGK-MPYDLYTNSEVVLKVSQGHR-------LYRPHLASDTIYQIMYSCWH 243
Query: 160 RSPTERPSFTEI 171
P +RP+F ++
Sbjct: 244 ELPEKRPTFQQL 255
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 200 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 252
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 253 YDVENRPGFAAVELRLR 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 314 NILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
+ L EI+ R PY G+++ EV+ + + +P P+ +++ ++M CWK
Sbjct: 373 ILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKN 424
Query: 161 SPTERPSFTEIHLFL 175
P ERP+F I L
Sbjct: 425 RPEERPTFEYIQSVL 439
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4 LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
+RHR Q L + + ++ +E+ K+ + +NCLV + +K+SDF S
Sbjct: 113 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 169
Query: 63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D Y + P+RW E + KF++KSD+W+FGV +WEI +L + PYE T+
Sbjct: 170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 228
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
E E+I+ G +Y P + K + +M CW ERP+F
Sbjct: 229 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 268
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 134 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 193
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 194 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 246
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 247 YDVENRPGFAAVELRLR 263
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4 LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
+RHR Q L + + ++ +E+ K+ + +NCLV + +K+SDF S
Sbjct: 93 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 149
Query: 63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D Y + P+RW E + KF++KSD+W+FGV +WEI +L + PYE T+
Sbjct: 150 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 208
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
E E+I+ G +Y P + K + +M CW ERP+F
Sbjct: 209 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 248
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E K + +N LV +KI DF D+ S Y V N LP++WMA
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP 243
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLP 142
ES+ +T KSDVWS+G+ LWEI +L + PY G+ D + I + D F
Sbjct: 244 ESLFEGIYTIKSDVWSYGILLWEIFSLGVN-PYPGIPVDANFYKLIQNGFKMDQPFY--- 299
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFL 175
T++I +M CW +RPSF + FL
Sbjct: 300 ---ATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 205
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 206 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 258
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 259 YDVENRPGFAAVELRLR 275
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4 LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
+RHR Q L + + ++ +E+ K+ + +NCLV + +K+SDF S
Sbjct: 97 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 153
Query: 63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D Y + P+RW E + KF++KSD+W+FGV +WEI +L + PYE T+
Sbjct: 154 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 212
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
E E+I+ G +Y P + K + +M CW ERP+F
Sbjct: 213 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 252
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4 LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
+RHR Q L + + ++ +E+ K+ + +NCLV + +K+SDF S
Sbjct: 104 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 160
Query: 63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D Y + P+RW E + KF++KSD+W+FGV +WEI +L + PYE T+
Sbjct: 161 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 219
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
E E+I+ G +Y P + K + +M CW ERP+F
Sbjct: 220 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 259
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 136 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 195
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 196 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 248
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 249 YDVENRPGFAAVELRLR 265
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4 LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
+RHR Q L + + ++ +E+ K+ + +NCLV + +K+SDF S
Sbjct: 98 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 154
Query: 63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D Y + P+RW E + KF++KSD+W+FGV +WEI +L + PYE T+
Sbjct: 155 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 213
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
E E+I+ G +Y P + K + +M CW ERP+F
Sbjct: 214 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 253
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 154 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 213
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 214 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 266
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 267 YDVENRPGFAAVELRLR 283
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D++ + LP++WMA E++ R
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + +KI DF + + D+Y + ++ +P W A ES++ R F+ SD W
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 203
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECW 158
FGVTLWE+ + P+ GL ++L I D E LP P+ +DI ++M +CW
Sbjct: 204 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 159 KRSPTERPSFTEIHLFL 175
P +RP+F + FL
Sbjct: 257 AHKPEDRPTFVALRDFL 273
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + +KI DF + + D+Y + ++ +P W A ES++ R F+ SD W
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
FGVTLWE+ + P+ GL ++L I D E LP P+ +DI ++M +CW
Sbjct: 210 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 159 KRSPTERPSFTEIHLFL 175
P +RP+F + FL
Sbjct: 263 AHKPEDRPTFVALRDFL 279
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + +KI DF + + D+Y + ++ +P W A ES++ R F+ SD W
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECW 158
FGVTLWE+ + P+ GL ++L I D E LP P+ +DI ++M +CW
Sbjct: 200 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 159 KRSPTERPSFTEIHLFL 175
P +RP+F + FL
Sbjct: 253 AHKPEDRPTFVALRDFL 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 6 HRPQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFS 64
H Q + + +V +LR G+ + S + +N LV K+SDF S +
Sbjct: 144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL-SRVLE 202
Query: 65 SDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D + T +PIRW A E++ R F++ SDVWSFGV +WE+L RPY +T+
Sbjct: 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG-ERPYWNMTNR 261
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
+V+ ++ E LP P L LM +CW + +RP F++I
Sbjct: 262 DVISSVE-------EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + +KI DF + + D+Y + ++ +P W A ES++ R F+ SD W
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 203
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECW 158
FGVTLWE+ + P+ GL ++L I D E LP P+ +DI ++M +CW
Sbjct: 204 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 159 KRSPTERPSFTEIHLFL 175
P +RP+F + FL
Sbjct: 257 AHKPEDRPTFVALRDFL 273
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 216 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 268
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 269 YDVENRPGFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + YY+ + P++W A E + KF++KSDVWS
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 216 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 268
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 269 YDVENRPGFAAVELRLR 285
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + +KI DF + + D+Y + ++ +P W A ES++ R F+ SD W
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
FGVTLWE+ + P+ GL ++L I D E LP P+ +DI ++M +CW
Sbjct: 200 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 159 KRSPTERPSFTEIHLFL 175
P +RP+F + FL
Sbjct: 253 AHKPEDRPTFVALRDFL 269
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6 HRPQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFS 64
H Q + + +V +LR G+ + S + +N LV K+SDF +
Sbjct: 144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 65 S-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
D +PIRW A E++ R F++ SDVWSFGV +WE+L RPY +T+ +
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG-ERPYWNMTNRD 262
Query: 124 VLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
V+ ++ E LP P L LM +CW + +RP F++I
Sbjct: 263 VISSVE-------EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 9 QASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD---SDMFS 64
Q + + +V +LR G+++ + + +N LV K+SDF D S
Sbjct: 105 QFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS 164
Query: 65 SDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV 124
Y +PIRW A E+++ RKFT+ SDVWS+G+ +WE+++ RPY +T+ +V
Sbjct: 165 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-ERPYWDMTNQDV 223
Query: 125 LENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
+ I + LP P L LM +CW++ RP F +I
Sbjct: 224 INAIEQDYR-------LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQI 264
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
G+E + +K + +N L+ +K +KI DF D+ + LP++WMA
Sbjct: 159 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA 218
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYL 141
E++ R +T +SDVWSFGV LWEI +L PY G+ D E + +G +
Sbjct: 219 PETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRA 272
Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI 171
P TT ++ M +CW P++RP+F+E+
Sbjct: 273 PD-YTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D+ + LP++WMA E++ R
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 41 KNCLVGKKFEIKISDFATD---SDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
+N LV K+SDF D S Y +PIRW A E+++ RKFT+ SDV
Sbjct: 164 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 223
Query: 98 WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNE 156
WS+G+ +WE+++ RPY +T+ +V+ I + LP P L LM +
Sbjct: 224 WSYGIVMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPSALHQLMLD 275
Query: 157 CWKRSPTERPSFTEI 171
CW++ RP F +I
Sbjct: 276 CWQKDRNHRPKFGQI 290
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D+ + LP++WMA E++ R
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D+ + LP++WMA E++ R
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
+KCI + +N L+ +K +KI DF D+ + LP++WMA E++ R
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWSFGV LWEI +L PY G+ D E + +G + P TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ M +CW P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 135 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 193
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ + G + P +++ LM CWK
Sbjct: 194 ILLTEIVTHGRI-PYPGMTNPEVIQNL-----ERGYRMVRPD-NCPEELYQLMRLCWKER 246
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 247 PEDRPTFDYLRSVLE 261
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRV-HDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + +KI DF + +D + V ++ +P W A ES++ R F+ SD W
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
FGVTLWE+ + P+ GL ++L I D E LP P+ +DI ++M +CW
Sbjct: 210 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 159 KRSPTERPSFTEIHLFL 175
P +RP+F + FL
Sbjct: 263 AHKPEDRPTFVALRDFL 279
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + D YY P++W A E + RKF+++SDVWS
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
+GVT+WE L+ + +PY+ + EV+ I + G+ + P P+ ++ LM++CW
Sbjct: 525 YGVTMWEALSYGQ-KPYKKMKGPEVMAFI-----EQGKRMECP-PECPPELYALMSDCWI 577
Query: 160 RSPTERPSFTEI 171
+RP F +
Sbjct: 578 YKWEDRPDFLTV 589
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 149 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 207
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ + G + P +++ LM CWK
Sbjct: 208 ILLTEIVTHGRI-PYPGMTNPEVIQNL-----ERGYRMVRPD-NCPEELYQLMRLCWKER 260
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 261 PEDRPTFDYLRSVLE 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 134 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 192
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 193 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 245
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 246 PEDRPTFDYLRSVLE 260
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRV-HDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + +KI DF + +D + V ++ +P W A ES++ R F+ SD W
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
FGVTLWE+ + P+ GL ++L I D E LP P+ +DI ++M +CW
Sbjct: 200 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 159 KRSPTERPSFTEIHLFL 175
P +RP+F + FL
Sbjct: 253 AHKPEDRPTFVALRDFL 269
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 145 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 204 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 256
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 257 PEDRPTFDYLRSVLE 271
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + D YY P++W A E + RKF+++SDVWS
Sbjct: 139 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 198
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
+GVT+WE L+ +PY+ + EV+ I + G+ + P P+ ++ LM++CW
Sbjct: 199 YGVTMWEALSYG-QKPYKKMKGPEVMAFI-----EQGKRMECP-PECPPELYALMSDCWI 251
Query: 160 RSPTERPSFTEIH 172
+RP F +
Sbjct: 252 YKWEDRPDFLTVE 264
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 144 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 203 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 255
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 256 PEDRPTFDYLRSVLE 270
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 9 QASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY 67
Q + + +V +LR G+++ S + +N L+ K+SDF S + D
Sbjct: 120 QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVLEDDP 178
Query: 68 YRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL 125
+ +PIRW A E++ RKFT+ SDVWS+G+ +WE+++ RPY +T+ +V+
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG-ERPYWEMTNQDVI 237
Query: 126 ENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
+ + E LP+P L LM +CW++ RP F EI
Sbjct: 238 KAVE-------EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEI 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ + KISDF + + + Y+ + P++W A E + KF++KSDVWS
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
FGV +WE + + +PY G+ EV + + GE + P +++ DLMN CW
Sbjct: 200 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 252
Query: 160 RSPTERPSFTEIHLFLQ 176
RP F + L L+
Sbjct: 253 YDVENRPGFAAVELRLR 269
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 4 LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
+RHR Q L + + ++ +E+ K+ + +NCLV + +K+SDF S
Sbjct: 113 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 169
Query: 63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
D + P+RW E + KF++KSD+W+FGV +WEI +L + PYE T+
Sbjct: 170 VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 228
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
E E+I+ G +Y P + K + +M CW ERP+F
Sbjct: 229 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 268
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 127 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 185
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 186 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 244
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + D+G LP P L LM +CW++ RP F +I L +
Sbjct: 245 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 294
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 137 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 195
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 196 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 254
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 255 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV + KI+DF + + + Y + PI+W A E++ FT KSDVWSFG
Sbjct: 140 NVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFG 198
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
+ L+EI+ + PY G T+ +V+ +S + +P + D L D+M CWK
Sbjct: 199 ILLYEIVTYGKI-PYPGRTNADVMTALSQGYR-------MPRVENCPDELYDIMKMCWKE 250
Query: 161 SPTERPSFTEIHLFL 175
ERP+F + L
Sbjct: 251 KAEERPTFDYLQSVL 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 13 LAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVH 71
+ +V +LR +G+++ S + +N LV K+SDF S + D +
Sbjct: 131 IQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGM-SRVLEDDPEAAY 189
Query: 72 D--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
+PIRW A E++ RKFT+ SDVWS+G+ +WE+++ RPY +++ +V++ I
Sbjct: 190 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIE 248
Query: 130 HLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
E LP P L LM +CW++ ++RP F +I L +
Sbjct: 249 -------EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDK 290
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 260
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 261 DADSRPKFREL 271
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 156 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 215
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 216 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 268
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 269 DADSRPKFREL 279
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+ +++++DF + D ++ PI+WMA ES+ K+T +SDVWS+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWK 159
GVT+WE++ PY GL EV + + + GE L PQ T D+ +M +CW
Sbjct: 204 GVTVWELMTFGA-EPYAGLRLAEVPDLL-----EKGE--RLAQPQICTIDVYMVMVKCWM 255
Query: 160 RSPTERPSFTEI 171
RP+F E+
Sbjct: 256 IDENIRPTFKEL 267
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 110 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 168
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 169 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 227
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + D+G LP P L LM +CW++ RP F +I L +
Sbjct: 228 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 110 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 168
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 169 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 227
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + D+G LP P L LM +CW++ RP F +I L +
Sbjct: 228 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 260
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 261 DADSRPKFREL 271
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 261
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 262 DADSRPKFREL 272
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 258
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 259 DADSRPKFREL 269
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+ +++++DF + D ++ PI+WMA ES+ K+T +SDVWS+
Sbjct: 162 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 221
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWK 159
GVT+WE++ PY GL EV + + + GE L PQ T D+ +M +CW
Sbjct: 222 GVTVWELMTFGA-EPYAGLRLAEVPDLL-----EKGE--RLAQPQICTIDVYMVMVKCWM 273
Query: 160 RSPTERPSFTEI 171
RP+F E+
Sbjct: 274 IDENIRPTFKEL 285
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVW 98
+N LV K+SDF S + D + +PIRW A E++ RKFT+ SDVW
Sbjct: 139 RNILVNSNLVCKVSDFGM-SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 197
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNEC 157
S+G+ +WE+++ RPY +++ +V++ I E LP P L LM +C
Sbjct: 198 SYGIVMWEVMSYG-ERPYWDMSNQDVIKAIE-------EGYRLPPPMDCPIALHQLMLDC 249
Query: 158 WKRSPTERPSFTEIHLFLQR 177
W++ ++RP F +I L +
Sbjct: 250 WQKERSDRPKFGQIVNMLDK 269
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVW 98
+N LV K+SDF S + D + +PIRW A E++ RKFT+ SDVW
Sbjct: 145 RNILVNSNLVCKVSDFGM-SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 203
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNEC 157
S+G+ +WE+++ RPY +++ +V++ I E LP P L LM +C
Sbjct: 204 SYGIVMWEVMSYG-ERPYWDMSNQDVIKAIE-------EGYRLPPPMDCPIALHQLMLDC 255
Query: 158 WKRSPTERPSFTEIHLFLQR 177
W++ ++RP F +I L +
Sbjct: 256 WQKERSDRPKFGQIVNMLDK 275
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF S +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + D+G LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 152 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 211
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 212 GVTVWELMTFGS-KPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 264
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 265 DADSRPKFREL 275
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 266 DADSRPKFREL 276
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 266 DADSRPKFREL 276
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 261
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 262 DADSRPKFREL 272
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 260
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 261 DADSRPKFREL 271
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 266 DADSRPKFREL 276
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 260
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 261 DADSRPKFREL 271
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 9 QASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD---SDMFS 64
Q + + +V +LR +G+ + + + +N LV K+SDF + S
Sbjct: 112 QFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 171
Query: 65 SDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV 124
Y +PIRW A E++ RKFT+ SD WS+G+ +WE+++ RPY +++ +V
Sbjct: 172 DPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG-ERPYWDMSNQDV 230
Query: 125 LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ I ++ P P + LM +CW++ RP F ++
Sbjct: 231 INAIEQ------DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQV 271
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 266 DADSRPKFREL 276
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 206
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 207 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 259
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 260 DADSRPKFREL 270
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 180 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 239
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 240 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 292
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 293 DADSRPKFREL 303
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 206
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 207 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 259
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 260 DADSRPKFREL 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 150 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 209
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 210 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 262
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 263 DADSRPKFREL 273
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 259 DADSRPKFREL 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 261
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 262 DADSRPKFREL 272
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 261
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 262 DADSRPKFREL 272
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 260
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 261 DADSRPKFREL 271
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 150 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 209
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 210 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 262
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 263 DADSRPKFREL 273
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 259 DADSRPKFREL 269
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 259 DADSRPKFREL 269
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF + +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-ARVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 223
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWS+G+ LWE+ +L PY G+ D + + I F L +
Sbjct: 224 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 276
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
+ D+M CW P +RP+F +I ++++
Sbjct: 277 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 259 DADSRPKFREL 269
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 259 DADSRPKFREL 269
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWS+G+ LWE+ +L PY G+ D + + I F L +
Sbjct: 247 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 299
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
+ D+M CW P +RP+F +I ++++
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 143 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 202
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 203 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 255
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 256 DADSRPKFREL 266
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 180 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 239
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWS+G+ LWE+ +L PY G+ D + + I F L +
Sbjct: 240 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 292
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
+ D+M CW P +RP+F +I ++++
Sbjct: 293 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 321
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 171 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 230
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 231 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 283
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 284 DADSRPKFREL 294
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV +KI+DF + + + + +PI+WMA ES+ R +T +SDVWS+
Sbjct: 140 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 199
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GVT+WE++ +PY+G+ E+ + + GE + P P T D+ +M +CW
Sbjct: 200 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 252
Query: 161 SPTERPSFTEI 171
RP F E+
Sbjct: 253 DADSRPKFREL 263
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF D+ + Y V N LP++WMA ES+
Sbjct: 182 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 241
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWS+G+ LWE+ +L PY G+ D + + I F L +
Sbjct: 242 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 294
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
+ D+M CW P +RP+F +I ++++
Sbjct: 295 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 323
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 5 RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
+H Q + + +V +LR +G+++ S + +N L+ K+SDF +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-GRVL 197
Query: 64 SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
D + +PIRW + E++ RKFT+ SDVWS+G+ LWE+++ RPY +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
+V++ + E LP P L LM +CW++ RP F +I L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV + KI+DF + + + Y + PI+W A E++ FT KS+VWSFG
Sbjct: 139 NVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
+ L+EI+ + PY G T+ +V+ +S + +P + D L D+M CWK
Sbjct: 198 ILLYEIVTYGKI-PYPGRTNADVMSALSQGYR-------MPRMENCPDELYDIMKMCWKE 249
Query: 161 SPTERPSFTEIHLFL 175
ERP+F + L
Sbjct: 250 KAEERPTFDYLQSVL 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + + PI+W A E++ FT KSDVWSFG
Sbjct: 145 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 204 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 256
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 257 PEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + + PI+W A E++ FT KSDVWSFG
Sbjct: 147 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 205
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 206 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 258
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 259 PEDRPTFDYLRSVLE 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + + PI+W A E++ FT KSDVWSFG
Sbjct: 148 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 206
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 207 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 259
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 260 PEDRPTFDYLRSVLE 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + + PI+W A E++ FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 41 KNCLVGKKFEIKISDFATDS--DMFSSDYYRVHD-NTSLPIRWMAWESVRLRKFTTKSDV 97
+N LV K+SDF + SSD +PIRW A E++ RKFT+ SD
Sbjct: 147 RNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDA 206
Query: 98 WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
WS+G+ +WE+++ RPY +++ +V+ I ++ P P + LM +C
Sbjct: 207 WSYGIVMWEVMSFG-ERPYWDMSNQDVINAIEQ------DYRLPPPPDCPTSLHQLMLDC 259
Query: 158 WKRSPTERPSFTEI 171
W++ RP F ++
Sbjct: 260 WQKDRNARPRFPQV 273
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + + PI+W A E++ FT KSDVWSFG
Sbjct: 141 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 200 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 252
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 253 PEDRPTFDYLRSVLE 267
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + + PI+W A E++ FT KSDVWSFG
Sbjct: 140 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 198
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 199 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 251
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 252 PEDRPTFDYLRSVLE 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + + PI+W A E++ FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ G + P +++ LM CWK
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF + + + PI+W A E++ FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
+ L EI+ R PY G+T+ EV++N+ + G + P +++ LM CWK
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNL-----ERGYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
P +RP+F + L+
Sbjct: 251 PEDRPTFDYLRSVLE 265
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KI+DF RV PI+W A E++ FT KSDVWSFG
Sbjct: 308 NILVSASLVCKIADFGLA---------RV--GAKFPIKWTAPEAINFGSFTIKSDVWSFG 356
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
+ L EI+ R PY G+++ EV+ + + +P P+ +++ ++M CWK
Sbjct: 357 ILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKN 408
Query: 161 SPTERPSFTEIHLFL 175
P ERP+F I L
Sbjct: 409 RPEERPTFEYIQSVL 423
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 32 KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
K CI + +N L+ KI DF + + Y V N LP++WMA ES+
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
+T +SDVWS+G+ LWE+ +L PY G+ D + + I F L +
Sbjct: 247 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 299
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
+ D+M CW P +RP+F +I ++++
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV + K+SDF + S+ D LP++W A E++R +KF+TKSDVWSF
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
G+ LWEI + R PY + +V+ + + D P + D+M CW
Sbjct: 373 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYDVMKNCWHL 425
Query: 161 SPTERPSFTEI 171
RP+F ++
Sbjct: 426 DAATRPTFLQL 436
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV + K+SDF + S+ D LP++W A E++R +KF+TKSDVWSF
Sbjct: 146 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
G+ LWEI + R PY + +V+ + + D P + ++M CW
Sbjct: 201 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYEVMKNCWHL 253
Query: 161 SPTERPSFTEI 171
RPSF ++
Sbjct: 254 DAAMRPSFLQL 264
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV + K+SDF + S+ D LP++W A E++R +KF+TKSDVWSF
Sbjct: 131 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
G+ LWEI + R PY + +V+ + + D P + ++M CW
Sbjct: 186 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYEVMKNCWHL 238
Query: 161 SPTERPSFTEI 171
RPSF ++
Sbjct: 239 DAAMRPSFLQL 249
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N LV + K+SDF + S+ D LP++W A E++R F+TKSDVWSF
Sbjct: 137 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREAAFSTKSDVWSF 191
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
G+ LWEI + R PY + +V+ + + D P + ++M CW
Sbjct: 192 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYEVMKNCWHL 244
Query: 161 SPTERPSFTEI 171
RPSF ++
Sbjct: 245 DAAMRPSFLQL 255
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + +YY+V + PI W A
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 246
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 247 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 285
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 14 AVVPLLRNKNGVEHSSLKKKCIKIFD-FKNCLVGKKFEIKISDFATDSDMFSSDYYRVHD 72
A+VP++ H LK I I +N + K +KI+DF + +++R
Sbjct: 125 AIVPII-------HRDLKSSNILILQKVENGDLSNKI-LKITDFG-----LAREWHRTTK 171
Query: 73 NTSL-PIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHL 131
++ WMA E +R F+ SDVWS+GV LWE+L P+ G+ L V ++
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT--GEVPFRGIDGLAVAYGVAM- 228
Query: 132 HADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
+ LP P T + LM +CW P RPSFT I
Sbjct: 229 -----NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNI 264
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
G+E+ ++ + +N LV + +KI+DF + DYY V + PI W
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 82 AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-------- 133
A ES+ F+ +SDVWSFGV L+E+ L ++ + + A
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELL 244
Query: 134 DDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++G+ + P P ++ +LM CW SP +RPSF+ +
Sbjct: 245 EEGQRLPAP-PACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
G+E+ ++ + +N LV + +KI+DF + DYY V + PI W
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 82 AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL------ENISHLHADD 135
A ES+ F+ +SDVWSFGV L+E+ L ++ +S L
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257
Query: 136 GEFIYLPTPQTT-KDILDLMNECWKRSPTERPSFTEI 171
E LP P ++ +LM CW SP +RPSF+ +
Sbjct: 258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
G+E+ ++ + +N LV + +KI+DF + DYY V + PI W
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 82 AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-------- 133
A ES+ F+ +SDVWSFGV L+E+ L ++ + A
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELL 245
Query: 134 DDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++G+ + P P ++ +LM CW SP +RPSF+ +
Sbjct: 246 EEGQRLPAP-PACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + ++++V + PI W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 246 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ +KI DF + +YYRV ++ P+ W A E ++ KF SDVWS
Sbjct: 140 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWS 199
Query: 100 FGVTLWEILNL--ARHRPYEGLTDLEVLENISHLHA-----------DDGEFIYLPTP-Q 145
FGVTL+E+L + P+ T+L I H + GE LP P +
Sbjct: 200 FGVTLYELLTYCDSNQSPHTKFTEL-----IGHTQGQMTVLRLTELLERGE--RLPRPDR 252
Query: 146 TTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGY 182
+I LM CW+ + RP+F + LQ Y
Sbjct: 253 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKY 289
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ +KI DF + +YYRV ++ P+ W A E ++ KF SDVWS
Sbjct: 141 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWS 200
Query: 100 FGVTLWEILNL--ARHRPYEGLTDLEVLENISHLHA-----------DDGEFIYLPTP-Q 145
FGVTL+E+L + P+ T+L I H + GE LP P +
Sbjct: 201 FGVTLYELLTYCDSNQSPHTKFTEL-----IGHTQGQMTVLRLTELLERGE--RLPRPDR 253
Query: 146 TTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGY 182
+I LM CW+ + RP+F + LQ Y
Sbjct: 254 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKY 290
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KK+ +K+ DF S + +S + P WMA E +R KSDV+SFG
Sbjct: 169 NLLVDKKYTVKVCDFGL-SRLKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEKSDVYSFG 226
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
V LWE+ L +P+ L +V+ + E PQ + ++ CW
Sbjct: 227 VILWELATL--QQPWGNLNPAQVVAAVG-FKCKRLEIPRNLNPQ----VAAIIEGCWTNE 279
Query: 162 PTERPSFTEIHLFLQRKNLGYVPPMN 187
P +RPSF I L+ VPP N
Sbjct: 280 PWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 249
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQ--RKNL-GYVP 184
++G LP P D I +M ECW + +RPSF ++ L + R N+ G VP
Sbjct: 250 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGLVP 302
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N LV KK+ +K+ DF S + +S + P WMA E +R KSDV+SFG
Sbjct: 169 NLLVDKKYTVKVCDFGL-SRLKASXFLXSKXAAGTP-EWMAPEVLRDEPSNEKSDVYSFG 226
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKR 160
V LWE+ L +P+ L +V+ + + L P+ + ++ CW
Sbjct: 227 VILWELATL--QQPWGNLNPAQVVAAVGF------KCKRLEIPRNLNPQVAAIIEGCWTN 278
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPMN 187
P +RPSF I L+ VPP N
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 263
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 264 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 302
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 263
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 264 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 302
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 277 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 246 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 248
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 249 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 287
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 243
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 244 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 282
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEI---LNLARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ + ++ P E + + ++ ++ L
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 246 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 248
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 249 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 287
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 251
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 252 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 290
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEI---LNLARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ + ++ P E + + ++ ++ L
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 244
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 245 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 283
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 250
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 251 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEI---LNLARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ + ++ P E + + ++ ++ L
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 248
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 249 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 287
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
G+E+ K+ + +N LV + +KI DF + + +V + PI W A
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
ES+ KF+ SDVWSFGV L+E+ ++ P E + + ++ ++ L
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 252
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
++G LP P D I +M ECW + +RPSF ++ L
Sbjct: 253 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 291
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
G+E+ ++ + +N LV + +KI+DF + D V + PI W
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 82 AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-------- 133
A ES+ F+ +SDVWSFGV L+E+ L ++ + A
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELL 241
Query: 134 DDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
++G+ + P P ++ +LM CW SP +RPSF+ +
Sbjct: 242 EEGQRLPAP-PACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 41 KNCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N LV + ++KI DF T + + V D+ P+ W A E + KF SDVWS
Sbjct: 143 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 202
Query: 100 FGVTLWEILN------------LARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
FGVTL E+L L P G + L N +G+ + P P
Sbjct: 203 FGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT----LKEGKRLPCP-PNCP 257
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
++ LM +CW+ P+ R SF +
Sbjct: 258 DEVYQLMRKCWEFQPSNRTSFQNL 281
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 41 KNCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N LV + ++KI DF T + + V D+ P+ W A E + KF SDVWS
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 214
Query: 100 FGVTLWEILN------------LARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
FGVTL E+L L P G + L N +G+ + P P
Sbjct: 215 FGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT----LKEGKRLPCP-PNCP 269
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
++ LM +CW+ P+ R SF +
Sbjct: 270 DEVYQLMRKCWEFQPSNRTSFQNL 293
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 14/142 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ +KI DF + +YYRV ++ P+ W A E ++ KF SDVWS
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWS 205
Query: 100 FGVTLWEIL---NLARHRPYEGLTDLEVLEN------ISHLHADDGEFIYLPTP-QTTKD 149
FGVTL+E+L + ++ P + L + + + ++ L + GE LP P + +
Sbjct: 206 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL-LERGE--RLPRPDKCPCE 262
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ LM CW+ + RP+F +
Sbjct: 263 VYHLMKNCWETEASFRPTFENL 284
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 14/142 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ +KI DF + +YYRV ++ P+ W A E ++ KF SDVWS
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWS 205
Query: 100 FGVTLWEIL---NLARHRPYEGLTDLEVLEN------ISHLHADDGEFIYLPTP-QTTKD 149
FGVTL+E+L + ++ P + L + + + ++ L + GE LP P + +
Sbjct: 206 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL-LERGE--RLPRPDKCPCE 262
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ LM CW+ + RP+F +
Sbjct: 263 VYHLMKNCWETEASFRPTFENL 284
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
+N L+ +KI DF + + YRV ++ P+ W A E ++ KF SDVWS
Sbjct: 163 RNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWS 222
Query: 100 FGVTLWEIL---NLARHRPYEGLTDLEVLEN------ISHLHADDGEFIYLPTP-QTTKD 149
FGVTL+E+L + ++ P + L + + + ++ L + GE LP P + +
Sbjct: 223 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL-LERGE--RLPRPDKCPAE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
+ LM CW+ + RP+F +
Sbjct: 280 VYHLMKNCWETEASFRPTFENL 301
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 19 LRNKNGVEH-SSLKKKCIKIFDFKN---CLVGKKFEIKISDFATDSDMFSSDYYRVH-DN 73
L+ GV + S++ K + D K LV +KI DF T D+ + H N
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI------QTHMTN 163
Query: 74 TSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYE--GLTDLEVLENISHL 131
WMA E ++ K DV+S+G+ LWE++ R +P++ G ++ + H
Sbjct: 164 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAV-HN 220
Query: 132 HADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
LP P I LM CW + P++RPS EI
Sbjct: 221 GTRPPLIKNLPKP-----IESLMTRCWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 44 LVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVT 103
LV +KI DF T D+ + N WMA E ++ K DV+S+G+
Sbjct: 138 LVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGII 192
Query: 104 LWEILNLARHRPYE--GLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
LWE++ R +P++ G ++ + H LP P I LM CW +
Sbjct: 193 LWEVIT--RRKPFDEIGGPAFRIMWAV-HNGTRPPLIKNLPKP-----IESLMTRCWSKD 244
Query: 162 PTERPSFTEI 171
P++RPS EI
Sbjct: 245 PSQRPSMEEI 254
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 139 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 185
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
R +M+ E ++ ++ +SD+WS G++L E + + R+ G + + E + ++ +
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVE-MAVGRYPIGSGSGSMAIFELLDYIVNEPPP 244
Query: 138 FIYLPTPQTTKDILDLMNECWKRSPTERPSFTE--IHLFLQRKN 179
LP+ + + D +N+C ++P ER + +H F++R +
Sbjct: 245 --KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 286
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S
Sbjct: 123 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS--- 171
Query: 79 RWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF 138
+M+ E ++ ++ +SD+WS G++L E + + R+ P + E+L+ I +
Sbjct: 172 -YMSPERLQGTHYSVQSDIWSMGLSLVE-MAVGRY-PRPPMAIFELLDYIVNEPPPK--- 225
Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTE--IHLFLQRKN 179
LP+ + + D +N+C ++P ER + +H F++R +
Sbjct: 226 --LPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 266
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+++ +KK + N L+ + E+K++DF + + R + P WMA
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPF-WMAP 188
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYLP 142
E ++ + +K+D+WS G+T E LAR P+ L ++VL I + E Y
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY-- 243
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
+K + + + C + P+ RP+ E+ H F+ R
Sbjct: 244 ----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+++ +KK + N L+ + E+K++DF + + R + P WMA
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMAP 193
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYLP 142
E ++ + +K+D+WS G+T E LAR P+ L ++VL I + E Y
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY-- 248
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
+K + + + C + P+ RP+ E+ H F+ R
Sbjct: 249 ----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 281
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
G+++ +KK + N L+ + E+K++DF + + R + P WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPF-WMA 172
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYL 141
E ++ + +K+D+WS G+T E LAR P+ L ++VL I + E Y
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY- 228
Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
+K + + + C + P+ RP+ E+ H F+ R
Sbjct: 229 -----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
G+++ +KK + N L+ + E+K++DF + + R + P WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMA 172
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYL 141
E ++ + +K+D+WS G+T E LAR P+ L ++VL I + E Y
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY- 228
Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
+K + + + C + P+ RP+ E+ H F+ R
Sbjct: 229 -----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 51 IKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSDVWSFGVTLW 105
+KI DF AT+ +S + + S I WMA E +R++ ++ +SDV++FG+ L+
Sbjct: 159 VKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 106 EILNLARHRPYEGLTDL-EVLENISHLH-ADDGEFIYLPTPQTTKDILDLMNECWKRSPT 163
E++ PY + + +++E + + D + P+ K LM EC K+
Sbjct: 217 ELM--TGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR---LMAECLKKKRD 271
Query: 164 ERPSFTEI 171
ERPSF I
Sbjct: 272 ERPSFPRI 279
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 51 IKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSDVWSFGVTLW 105
+KI DF AT+ +S + + S I WMA E +R++ ++ +SDV++FG+ L+
Sbjct: 159 VKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 106 EILNLARHRPYEGLTDL-EVLENISHLH-ADDGEFIYLPTPQTTKDILDLMNECWKRSPT 163
E++ PY + + +++E + + D + P+ K LM EC K+
Sbjct: 217 ELMT--GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR---LMAECLKKKRD 271
Query: 164 ERPSFTEI 171
ERPSF I
Sbjct: 272 ERPSFPRI 279
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 25/170 (14%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 120 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 166
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARH--RPYEGLTD----LEVLENISHL 131
R +M+ E ++ ++ +SD+WS G++L E + + R+ P + D + + E + ++
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVE-MAVGRYPIPPPDAKEDSRPPMAIFELLDYI 225
Query: 132 HADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTE--IHLFLQRKN 179
+ LP+ + + D +N+C ++P ER + +H F++R +
Sbjct: 226 VNEPPP--KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 273
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS D+ + ++ E + R K D+WS
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 196 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 246
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 247 NPSQRPMLREV 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS D+ + ++ E + R K D+WS
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 218
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 219 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 269
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 270 NPSQRPMLREV 280
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
A LA +N + H ++ K I + ++ G IK+SD + D +
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 70 VHDNTSLPIRWMAWESVRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
I W+ E + K +D WSFG TLWEI + +P L L+
Sbjct: 179 ER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICS-GGDKPLSALDSQRKLQFY 231
Query: 129 SHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
H LP P+ ++ +L+N C P RPSF I
Sbjct: 232 EDRHQ-------LPAPKAA-ELANLINNCMDYEPDHRPSFRAI 266
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDF------ATDSDMFSSDYYRVHDNT 74
+KNG H +K N L+G+ ++I+DF AT D+ + + T
Sbjct: 133 HKNGQIHRDVKAG--------NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 75 SLPIRWMAWESV-RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA 133
WMA E + ++R + K+D+WSFG+T E+ A PY ++VL + L
Sbjct: 185 PC---WMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMKVL--MLTLQN 237
Query: 134 DDGEFIYLPTPQTTKDIL--------DLMNECWKRSPTERPSFTEI--HLFLQR 177
D L T K++L +++ C ++ P +RP+ E+ H F Q+
Sbjct: 238 DPPS---LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT+ +S + + S I WMA E +R++ ++ +SD
Sbjct: 154 NIFLHEDLTVKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E+ + PY + + + + +L D + + P+ K L
Sbjct: 212 VYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 265
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 266 MAECLKKKRDERPLFPQI 283
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT+ +S + + S I WMA E +R++ ++ +SD
Sbjct: 134 NIFLHEDLTVKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E++ PY + + + + +L D + + P+ K L
Sbjct: 192 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 245
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 246 MAECLKKKRDERPLFPQI 263
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS D + ++ E + R K D+WS
Sbjct: 138 ENLLLGSAGELKIADFGWSVHAPSSR----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 194 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 244
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 245 NPSQRPMLREV 255
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 30 LKKKCIKIFDFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWES 85
L K I D K N + + +KI DF AT+ +S + + S I WMA E
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEV 205
Query: 86 VRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFI 139
+R++ ++ +SDV++FG+ L+E+ + PY + + + + +L D + +
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-V 262
Query: 140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
P+ K LM EC K+ ERP F +I
Sbjct: 263 RSNCPKAMK---RLMAECLKKKRDERPLFPQI 291
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDF------ATDSDMFSSDYYRVHDNT 74
+KNG H +K N L+G+ ++I+DF AT D+ + + T
Sbjct: 138 HKNGQIHRDVKAG--------NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 75 SLPIRWMAWESV-RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA 133
WMA E + ++R + K+D+WSFG+T E+ A PY ++VL + L
Sbjct: 190 PC---WMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMKVL--MLTLQN 242
Query: 134 DDGEFIYLPTPQTTKDIL--------DLMNECWKRSPTERPSFTEI--HLFLQR 177
D L T K++L +++ C ++ P +RP+ E+ H F Q+
Sbjct: 243 DPPS---LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 51 IKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSDVWSFGVTLW 105
+KI DF AT +S + + S I WMA E +R++ ++ +SDV++FG+ L+
Sbjct: 147 VKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 204
Query: 106 EILNLARHRPYEGLTDL-EVLENISHLH-ADDGEFIYLPTPQTTKDILDLMNECWKRSPT 163
E++ PY + + +++E + + D + P+ K LM EC K+
Sbjct: 205 ELM--TGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR---LMAECLKKKRD 259
Query: 164 ERPSFTEI 171
ERPSF I
Sbjct: 260 ERPSFPRI 267
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS S + ++ E + R K D+WS
Sbjct: 138 ENLLLGSAGELKIADFGWSCHAPSSR----RTTLSGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 194 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 244
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 245 NPSQRPMLREV 255
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR----LRKFTTKSDV 97
N L+ ++K+ DF S D + D P +MA E + + ++ KSD+
Sbjct: 140 NVLINALGQVKMCDFGI-SGYLVDDVAKDIDAGCKP--YMAPERINPELNQKGYSVKSDI 196
Query: 98 WSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
WS G+T+ E+ L PY+ T + L+ + + LP + + + +D ++
Sbjct: 197 WSLGITMIELAIL--RFPYDSWGTPFQQLKQVVEEPSPQ-----LPADKFSAEFVDFTSQ 249
Query: 157 CWKRSPTERPSFTEI 171
C K++ ERP++ E+
Sbjct: 250 CLKKNSKERPTYPEL 264
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR----LRKFTTKSDV 97
N L+ ++K+ DF + S + D P +MA E + + ++ KSD+
Sbjct: 184 NVLINALGQVKMCDFGISGYLVDS-VAKTIDAGCKP--YMAPERINPELNQKGYSVKSDI 240
Query: 98 WSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
WS G+T+ E+ L PY+ T + L+ + + LP + + + +D ++
Sbjct: 241 WSLGITMIELAIL--RFPYDSWGTPFQQLKQVVEEPSPQ-----LPADKFSAEFVDFTSQ 293
Query: 157 CWKRSPTERPSFTEI 171
C K++ ERP++ E+
Sbjct: 294 CLKKNSKERPTYPEL 308
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEXIEGRXHDEKVDLW 195
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 196 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 246
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 247 KHNPSQRPXLREV 259
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
A LA +N + H ++ K I + ++ G IK+SD + D +
Sbjct: 119 AKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 70 VHDNTSLPIRWMAWESVR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
I W+ E + + +D WSFG TLWEI + +P L L+
Sbjct: 179 ER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICS-GGDKPLSALDSQRKLQFY 231
Query: 129 SHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
H LP P+ ++ +L+N C P RPSF I
Sbjct: 232 EDRHQ-------LPAPKAA-ELANLINNCMDYEPDHRPSFRAI 266
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT +S + + S I WMA E +R++ ++ +SD
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E++ PY + + + + +L D + + P+ K L
Sbjct: 192 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 245
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 246 MAECLKKKRDERPLFPQI 263
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+++ +KK + N L+ ++ ++K++DF + + R + P WMA
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMAP 189
Query: 84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD-----GEF 138
E ++ + +K+D+WS G+T E LA+ P +D+ + + + ++ G+F
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIE---LAKGEPPN--SDMHPMRVLFLIPKNNPPTLVGDF 244
Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
TK + ++ C + P+ RP+ E+ H F+ +
Sbjct: 245 --------TKSFKEFIDACLNKDPSFRPTAKELLKHKFIVK 277
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT +S + + S I WMA E +R++ ++ +SD
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E++ PY + + + + +L D + + P+ K L
Sbjct: 192 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 245
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 246 MAECLKKKRDERPLFPQI 263
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT +S + + S I WMA E +R++ ++ +SD
Sbjct: 136 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E++ PY + + + + +L D + + P+ K L
Sbjct: 194 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 247
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 248 MAECLKKKRDERPLFPQI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSRRXXLXGT----LDYLPPEMIEGRMHDEKVDLWSL 197
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 198 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 248
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 249 NPSQRPMLREV 259
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 30 LKKKCIKIFDFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWES 85
L K I D K N + + +KI DF AT +S + + S I WMA E
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEV 205
Query: 86 VRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFI 139
+R++ ++ +SDV++FG+ L+E+ + PY + + + + +L D + +
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-V 262
Query: 140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
P+ K LM EC K+ ERP F +I
Sbjct: 263 RSNCPKAMK---RLMAECLKKKRDERPLFPQI 291
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT +S + + S I WMA E +R++ ++ +SD
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E++ PY + + + + +L D + + P+ K L
Sbjct: 197 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 250
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 251 MAECLKKKRDERPLFPQI 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT +S + + S I WMA E +R++ ++ +SD
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E++ PY + + + + +L D + + P+ K L
Sbjct: 197 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 250
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 251 MAECLKKKRDERPLFPQI 268
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT +S + + S I WMA E +R++ ++ +SD
Sbjct: 161 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
V++FG+ L+E+ + PY + + + + +L D + + P+ K L
Sbjct: 219 VYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 272
Query: 154 MNECWKRSPTERPSFTEI 171
M EC K+ ERP F +I
Sbjct: 273 MAECLKKKRDERPLFPQI 290
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRTELCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 244 NPSQRPMLREV 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 191 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 241
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 242 KHNPSQRPMLREV 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 217 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 267
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 268 KHNPSQRPMLREV 280
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 141 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 195 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 245
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 246 KHNPSQRPMLREV 258
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 136 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 189
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 190 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 240
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 241 KHNPSQRPMLREV 253
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 134 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 187
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 188 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 238
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 239 KHNPSQRPMLREV 251
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 138 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 194 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 244
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 245 NPSQRPMLREV 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 244 NPSQRPMLREV 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 244 NPSQRPMLREV 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 197
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 198 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 248
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 249 NPSQRPMLREV 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 244 NPSQRPMLREV 254
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 139 ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 194
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 195 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 245
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 246 NPSQRPMLREV 256
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 80 WMAWESVRLRKFTT---KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
W+A E+++ + T +D+WSF V LWE++ R P+ L+++E+ + A +G
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKV----ALEG 227
Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
+P P + + LM C P +RP F I L++
Sbjct: 228 LRPTIP-PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 194 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 244
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 245 KHNPSQRPMLREV 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 194 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 244
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 245 KHNPSQRPMLREV 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 196 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 246
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 247 KHNPSQRPMLREV 259
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 196 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 246
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 247 KHNPSQRPMLREV 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRAALCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 244 NPSQRPMLREV 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 196 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 246
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 247 NPSQRPMLREV 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSRRAALCGT----LDYLPPEMIEGRMHDEKVDLWSL 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 196 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 246
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 247 NPSQRPMLREV 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS + + ++ E + R K D+WS
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRTXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E + IS + +F+ T+ DL++ K
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
+P++RP E+
Sbjct: 244 NPSQRPMLREV 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 154 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 207
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 208 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 258
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 259 KHNPSQRPMLREV 271
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
N + + +KI DF AT +S +V T + WMA E +R++ F+ +SD
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQ-QVEQPTG-SVLWMAPEVIRMQDNNPFSFQSD 219
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHAD-DGEFIYLPTPQTTKDILDLM 154
V+S+G+ L+E+ + PY + + +++ + +A D +Y P+ K L+
Sbjct: 220 VYSYGIVLYEL--MTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK---RLV 274
Query: 155 NECWKRSPTERPSFTEI 171
+C K+ ERP F +I
Sbjct: 275 ADCVKKVKEERPLFPQI 291
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N + +K+ D FSS H P +M+ E + + KSD+WS G
Sbjct: 166 NVFITATGVVKLGDLGL-GRFFSSKTTAAHSLVGTPY-YMSPERIHENGYNFKSDIWSLG 223
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
L+E+ L P+ G D L ++ + ++ LP+ ++++ L+N C
Sbjct: 224 CLLYEMAAL--QSPFYG--DKMNLYSLCK-KIEQCDYPPLPSDHYSEELRQLVNMCINPD 278
Query: 162 PTERPSFTEIHLFLQR 177
P +RP T ++ +R
Sbjct: 279 PEKRPDVTYVYDVAKR 294
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
N + + KK + +N L+G E+KI+DF SS + + ++
Sbjct: 119 NALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT----LDYLP 174
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
E + R K D+WS GV +E L P+E T + + IS + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEF--LVGKPPFEANTYQDTYKRISRVEFTFPDFV--- 229
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI 171
T+ DL++ K +P++RP E+
Sbjct: 230 ----TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+E+ +K + N LVG+ IKI+DF ++ SD + NT +MA
Sbjct: 149 GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAP 206
Query: 84 ESV-RLRK-FTTKS-DVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD-DGEFI 139
ES+ RK F+ K+ DVW+ GVTL+ + P+ + E I LH+ + +
Sbjct: 207 ESLSETRKIFSGKALDVWAMGVTLYCF--VFGQCPF-------MDERIMCLHSKIKSQAL 257
Query: 140 YLP-TPQTTKDILDLMNECWKRSPTERPSFTEIHL 173
P P +D+ DL+ ++P R EI L
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI++F SS T+L + ++ E + R K D+W
Sbjct: 140 ENLLLGSAGELKIANFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 194 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 244
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 245 KHNPSQRPMLREV 257
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 38 FDFKNCLVGKKFEIKISDFATDSDMFS--SDYYRVHDNTSLPI-RWMAWE----SVRLRK 90
F +N LV + I+D + M S SDY + +N + R+MA E +R
Sbjct: 139 FKSRNVLVKSNLQCCIADLGL-AVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 197
Query: 91 FTTK--SDVWSFGVTLWEILN-------LARHRP--YEGLTDLEVLENISHLHADDGEFI 139
F + +D+W+FG+ LWEI + +RP Y+ + + E++ + D +
Sbjct: 198 FESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTP 257
Query: 140 YLPTPQTTKDIL----DLMNECWKRSPTERPSFTEIHLFLQR 177
+P +L +M ECW +P+ R + I LQ+
Sbjct: 258 TIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQK 299
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI++F SS T+L + ++ E + R K D+W
Sbjct: 139 ENLLLGSAGELKIANFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E + IS + +F+ T+ DL++
Sbjct: 193 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 243
Query: 159 KRSPTERPSFTEI 171
K +P++RP E+
Sbjct: 244 KHNPSQRPMLREV 256
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 51 IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNL 110
IKI DF +++F SD + N + +MA E + R T K D+WS GV ++ +L
Sbjct: 166 IKIIDFGL-AELFKSDEHST--NAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTG 221
Query: 111 ARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTE 170
P+ G + EV + ++ + TPQ +DL+ + + P RPS +
Sbjct: 222 CL--PFTGTSLEEVQQKATYKEPNYAVECRPLTPQA----VDLLKQMLTKDPERRPSAAQ 275
Query: 171 I 171
+
Sbjct: 276 V 276
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+ ++ IK++DF + S D+ + + + +MA E V R T +D WSF
Sbjct: 155 ENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL-PTPQTTKDILDLMNECWK 159
GV ++E+L P++G E + I L A G +L P Q+ L+ +K
Sbjct: 213 GVLMFEMLTGT--LPFQGKDRKETMTMI--LKAKLGMPQFLSPEAQS------LLRMLFK 262
Query: 160 RSPTER 165
R+P R
Sbjct: 263 RNPANR 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+ ++ IK++DF + S D+ + + + +MA E V R T +D WSF
Sbjct: 156 ENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 213
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL-PTPQTTKDILDLMNECWK 159
GV ++E+L P++G E + I L A G +L P Q+ L+ +K
Sbjct: 214 GVLMFEMLTGT--LPFQGKDRKETMTMI--LKAKLGMPQFLSPEAQS------LLRMLFK 263
Query: 160 RSPTER 165
R+P R
Sbjct: 264 RNPANR 269
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 57/205 (27%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 130 LREKHQIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 176
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDG 136
R +MA E ++ ++ +SD+WS G++L E L + R+ P +LE + + ++G
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVE-LAVGRYPIPPPDAKELEAIFGRPVVDGEEG 235
Query: 137 E---------------------------------FIY------LPTPQTTKDILDLMNEC 157
E +I LP T D + +N+C
Sbjct: 236 EPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKC 295
Query: 158 WKRSPTERPSFTEI--HLFLQRKNL 180
++P ER + H F++R +
Sbjct: 296 LIKNPAERADLKMLTNHTFIKRSEV 320
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
G+++ ++K + N L+ ++ ++K++DF + + R + P WMA
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NXFVGTPF-WMA 184
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
E ++ + K+D+WS G+T E LA+ P +DL + + + + P
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIE---LAKGEPPN--SDLHPMRVLFLIPKNSP-----P 234
Query: 143 T--PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
T Q +K + + C + P RP+ E+ H F+ R
Sbjct: 235 TLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 273
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+ ++ IK++DF + S D+ + + + +MA E V R T +D WSF
Sbjct: 155 ENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL-PTPQTTKDILDLMNECWK 159
GV ++E+L P++G E + I L A G +L P Q+ L+ +K
Sbjct: 213 GVLMFEMLTGT--LPFQGKDRKETMTMI--LKAKLGMPQFLSPEAQS------LLRMLFK 262
Query: 160 RSPTER 165
R+P R
Sbjct: 263 RNPANR 268
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 128 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 81 MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ K + KSDVWS G L+ + Y +++ IS
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 231
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 232 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR----LRKFTTKSDV 97
N L+ ++K DF S D + D P + A E + + ++ KSD+
Sbjct: 167 NVLINALGQVKXCDFGI-SGYLVDDVAKDIDAGCKP--YXAPERINPELNQKGYSVKSDI 223
Query: 98 WSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
WS G+T E+ L PY+ T + L+ + + LP + + + +D ++
Sbjct: 224 WSLGITXIELAIL--RFPYDSWGTPFQQLKQVVEEPSPQ-----LPADKFSAEFVDFTSQ 276
Query: 157 CWKRSPTERPSFTEI 171
C K++ ERP++ E+
Sbjct: 277 CLKKNSKERPTYPEL 291
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 120 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 166
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
R +M+ E ++ ++ +SD+WS G++L E+ P +LE++ + D E
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEGDAAE 225
Query: 138 -------------------------------FIYLPTPQTTKDIL-----DLMNECWKRS 161
+ P P+ + D +N+C ++
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 162 PTERPSFTE--IHLFLQRKN 179
P ER + +H F++R +
Sbjct: 286 PAERADLKQLMVHAFIKRSD 305
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 124 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 81 MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ K + KSDVWS G L+ + Y +++ IS
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 227
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 228 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
L+ K+GV H +K N L+ ++ +IK+ DF + + D ++
Sbjct: 140 LKEKHGVIHRDVKPS--------NILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCA 188
Query: 79 RWMAWESV-----RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLH 132
+MA E + + ++DVWS G++L E+ PY+ TD EVL +
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT--GQFPYKNCKTDFEVLTKVLQE- 245
Query: 133 ADDGEFIYLPTPQT-TKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
E LP + D + +C + +RP + ++ H F++R
Sbjct: 246 ----EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 144 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 81 MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ K + KSDVWS G L+ + Y +++ IS
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 247
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 248 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 120 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 166
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
R +M+ E ++ ++ +SD+WS G++L E+ P +LE++ + D E
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEGDAAE 225
Query: 138 -------------------------------FIYLPTPQTTKDIL-----DLMNECWKRS 161
+ P P+ + D +N+C ++
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 162 PTERPSFTE--IHLFLQRKN 179
P ER + +H F++R +
Sbjct: 286 PAERADLKQLMVHAFIKRSD 305
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+G E+KI+DF SS D + ++ E + R K D+WS
Sbjct: 141 ENLLLGSNGELKIADFGWSVHAPSSR----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV +E L P+E T E IS + +F+ T+ DL++ K
Sbjct: 197 GVLCYEF--LVGMPPFEAHTYQETYRRISRVEFTFPDFV-------TEGARDLISRLLKH 247
Query: 161 SPTERPSFTEI 171
+ ++R + E+
Sbjct: 248 NASQRLTLAEV 258
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 120 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 166
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
R +M+ E ++ ++ +SD+WS G++L E+ P +LE++ + D E
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEGDAAE 225
Query: 138 -------------------------------FIYLPTPQTTKDIL-----DLMNECWKRS 161
+ P P+ + D +N+C ++
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 162 PTERPSFTE--IHLFLQRKN 179
P ER + +H F++R +
Sbjct: 286 PAERADLKQLMVHAFIKRSD 305
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 120 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 166
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
R +M+ E ++ ++ +SD+WS G++L E+ P +LE++ + D E
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEGDAAE 225
Query: 138 -------------------------------FIYLPTPQTTKDIL-----DLMNECWKRS 161
+ P P+ + D +N+C ++
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 162 PTERPSFTE--IHLFLQRKN 179
P ER + +H F++R +
Sbjct: 286 PAERADLKQLMVHAFIKRSD 305
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 182 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 228
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
R +M+ E ++ ++ +SD+WS G++L E+ P +LE++ + D E
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEGDAAE 287
Query: 138 -------------------------------FIYLPTPQTTKDIL-----DLMNECWKRS 161
+ P P+ + D +N+C ++
Sbjct: 288 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKN 347
Query: 162 PTERPSFTE--IHLFLQRKN 179
P ER + +H F++R +
Sbjct: 348 PAERADLKQLMVHAFIKRSD 367
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
LR K+ + H +K N LV + EIK+ DF + S N+ +
Sbjct: 147 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 193
Query: 79 R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
R +M+ E ++ ++ +SD+WS G++L E+ P +LE++ + D E
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEGDAAE 252
Query: 138 -------------------------------FIYLPTPQTTKDIL-----DLMNECWKRS 161
+ P P+ + D +N+C ++
Sbjct: 253 TPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 312
Query: 162 PTERPSFTE--IHLFLQRKN 179
P ER + +H F++R +
Sbjct: 313 PAERADLKQLMVHAFIKRSD 332
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYY--RVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
N L+ + F KISDF A S+ F+ R+ T+ +MA E++R + T KSD+
Sbjct: 163 NILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA----YMAPEALR-GEITPKSDI 217
Query: 98 WSFGVTLWEIL 108
+SFGV L EI+
Sbjct: 218 YSFGVVLLEII 228
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYY--RVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
N L+ + F KISDF A S+ F+ R+ T+ +MA E++R + T KSD+
Sbjct: 163 NILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA----YMAPEALR-GEITPKSDI 217
Query: 98 WSFGVTLWEIL 108
+SFGV L EI+
Sbjct: 218 YSFGVVLLEII 228
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 172 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 81 MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ K + KSDVWS G L+ + Y +++ IS
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 275
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 276 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYY--RVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
N L+ + F KISDF A S+ F+ R+ T+ +MA E++R + T KSD+
Sbjct: 157 NILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA----YMAPEALR-GEITPKSDI 211
Query: 98 WSFGVTLWEIL 108
+SFGV L EI+
Sbjct: 212 YSFGVVLLEII 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 125 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 81 MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ K + KSDVWS G L+ + Y +++ IS
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 228
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 229 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 80 WMAWESVRLRKFTT---KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
W+A E+++ + T +D WSF V LWE+ + R P+ L++ E+ + A +G
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWEL--VTREVPFADLSNXEIGXKV----ALEG 227
Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
+P P + + L C P +RP F I L++
Sbjct: 228 LRPTIP-PGISPHVSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 144 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 81 MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ K + KSDVWS G L+ + Y +++ IS
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 247
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 248 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 172 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 81 MAWESVRLRKFTTKS-----------DVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ + ++ DVWS G L+ + Y +++ IS
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 275
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 276 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+++G+ HS LK I D +K+ DF + M V D+ + +
Sbjct: 172 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 81 MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
M E+++ K + KSDVWS G L+ + Y +++ IS
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 275
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
LHA D I P P+ KD+ D++ C KR P +R S E+ H ++Q
Sbjct: 276 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 28 SSLKKKCIKIFDF-------------KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT 74
+++ ++C++ +F N L+G +K++DF + + R +
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SEMV 177
Query: 75 SLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD 134
P WMA E V + + K D+WS G+ E++ PY L L +L A
Sbjct: 178 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRAL----YLIAT 230
Query: 135 DGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMNS 188
+G L P+ I D +N C +R S E+ LQ + L P++S
Sbjct: 231 NGT-PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL---LQHQFLKIAKPLSS 281
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 28 SSLKKKCIKIFDF-------------KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT 74
+++ ++C++ +F N L+G +K++DF + + R
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMV 177
Query: 75 SLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD 134
P WMA E V + + K D+WS G+ E++ PY L L +L A
Sbjct: 178 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRAL----YLIAT 230
Query: 135 DGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMNS 188
+G L P+ I D +N C + +R S E+ LQ + L P++S
Sbjct: 231 NGT-PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL---LQHQFLKIAKPLSS 281
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 24/150 (16%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSS-------------DYYRVHDNTSLPIRWMAWESVRL 88
NCLV + + ++DF M D + + P WMA E +
Sbjct: 138 NCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY-WMAPEMING 196
Query: 89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI--YLPTPQT 146
R + K DV+SFG+ L EI+ P + L + F+ Y P P
Sbjct: 197 RSYDEKVDVFSFGIVLCEIIGRVNADP-------DYLPRTMDFGLNVRGFLDRYCP-PNC 248
Query: 147 TKDILDLMNECWKRSPTERPSFTEIHLFLQ 176
+ C P +RPSF ++ +L+
Sbjct: 249 PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 28 SSLKKKCIKIFDF-------------KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT 74
+++ ++C++ +F N L+G +K++DF + + R
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMV 178
Query: 75 SLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD 134
P WMA E V + + K D+WS G+ E++ PY L L +L A
Sbjct: 179 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRAL----YLIAT 231
Query: 135 DGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI--HLFLQ 176
+G L P+ I D +N C + +R S E+ H FL+
Sbjct: 232 NGT-PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE----SVRLRKFTTKSDV 97
N L+ + IK+ DF + S + D P +MA E S + + +SDV
Sbjct: 156 NILLDRSGNIKLCDFGISGQLVDS-IAKTRDAGCRP--YMAPERIDPSASRQGYDVRSDV 212
Query: 98 WSFGVTLWEILNLARHR-PYEGLTDLEVLENISH-LHADDGEFIYLPTPQTTKDILDLMN 155
WS G+TL+E LA R PY V + ++ + D + + + ++ +N
Sbjct: 213 WSLGITLYE---LATGRFPYPKWN--SVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVN 267
Query: 156 ECWKRSPTERPSFTEI--HLFL 175
C + ++RP + E+ H F+
Sbjct: 268 LCLTKDESKRPKYKELLKHPFI 289
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 24/128 (18%)
Query: 52 KISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRK--FTTKSDVWSFGVTLWEI 107
K++DF T VH + L +WMA E++ + +T K+D +SF + L+ I
Sbjct: 169 KVADFGTSQQ-------SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 108 LNLARHRPYEGLTDLEVLENISHLHA--DDGEFIYLP--TPQTTKDILDLMNECWKRSPT 163
L EG D I ++ ++G +P P +++++L CW P
Sbjct: 222 LT------GEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL---CWSGDPK 272
Query: 164 ERPSFTEI 171
+RP F+ I
Sbjct: 273 KRPHFSYI 280
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 25/165 (15%)
Query: 28 SSLKKKCIKIFDF-------------KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT 74
+++ ++C++ +F N L+G +K++DF + + R
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-SXMV 178
Query: 75 SLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD 134
P WMA E V + + K D+WS G+ E++ PY L L +L A
Sbjct: 179 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRAL----YLIAT 231
Query: 135 DGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI--HLFLQ 176
+G L P+ I D +N C + +R S E+ H FL+
Sbjct: 232 NGT-PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 28 SSLKKKCIKIFDF-------------KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT 74
+++ ++C++ +F N L+G +K++DF + + R
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-STMV 177
Query: 75 SLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD 134
P WMA E V + + K D+WS G+ E++ PY L L +L A
Sbjct: 178 GTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE--GEPPYLNENPLRAL----YLIAT 230
Query: 135 DGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMNS 188
+G L P+ I D +N C +R S E+ LQ + L P++S
Sbjct: 231 NGT-PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL---LQHQFLKIAKPLSS 281
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
+N L+G E+KI+DF SS T+L + ++ E + R K D+W
Sbjct: 141 ENLLLGSNGELKIADFGWSVHAPSS------RRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S GV +E L P+E T E IS + +F+ T+ DL++
Sbjct: 195 SLGVLCYEF--LVGMPPFEAHTYQETYRRISRVEFTFPDFV-------TEGARDLISRLL 245
Query: 159 KRSPTERPSFTEI 171
K + ++R + E+
Sbjct: 246 KHNASQRLTLAEV 258
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI 139
+++ E + + KSD+W+ G L+E+ L +H G VL+ IS G F
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTL-KHAFEAGSMKNLVLKIIS------GSFP 243
Query: 140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
+ + + D+ L+++ +KR+P +RPS I
Sbjct: 244 PV-SLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+ ++ IK++DF + + D+ + + + +MA E V + + +D WS+
Sbjct: 159 ENILLDEEGHIKLTDFGLSKE--AIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSY 216
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
GV ++E+L + P++G E + I L A G +L T + L+ +KR
Sbjct: 217 GVLMFEMLTGS--LPFQGKDRKETMTLI--LKAKLGMPQFLSTEAQS-----LLRALFKR 267
Query: 161 SPTER 165
+P R
Sbjct: 268 NPANR 272
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 42 NCLVGKKFEIKISDF--ATDSDMFSSDYY--RVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
N L+ + F KISDF A S+ F+ R+ T+ + A E++R + T KSD+
Sbjct: 154 NILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTA----YXAPEALR-GEITPKSDI 208
Query: 98 WSFGVTLWEIL 108
+SFGV L EI+
Sbjct: 209 YSFGVVLLEII 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 51 IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNL 110
IK+ DF + + + ++ N ++A E V ++D+WS GV + +L+
Sbjct: 172 IKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
Query: 111 ARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL 151
A P+ G T E L NIS ++ D E + T + KD +
Sbjct: 229 AS--PFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 267
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 51 IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNL 110
IK+ DF + + + ++ N ++A E V ++D+WS GV + +L+
Sbjct: 158 IKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 111 ARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL 151
A P+ G T E L NIS ++ D E + T + KD +
Sbjct: 215 AS--PFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 253
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 51 IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNL 110
IK+ DF + + + ++ N ++A E V ++D+WS GV + +L+
Sbjct: 151 IKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
Query: 111 ARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL 151
A P+ G T E L NIS ++ D E + T + KD +
Sbjct: 208 AS--PFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFI 246
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR---KFTTKSDVW 98
N L+ + +K+ DF + S M ++ + P WMA E + ++ K DVW
Sbjct: 184 NILLSEPGLVKLGDFGSASIMAPANXF-----VGTPY-WMAPEVILAMDEGQYDGKVDVW 237
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S G+T E LA +P L ++ + + H+ + E L + ++ + ++ C
Sbjct: 238 SLGITCIE---LAERKP--PLFNMNAMSALYHIAQN--ESPALQSGHWSEYFRNFVDSCL 290
Query: 159 KRSPTERPS 167
++ P +RP+
Sbjct: 291 QKIPQDRPT 299
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 63 FSSDYYRVHDNTSL--PIRWMAWESVRLRK--FTTKSDVWSFGVTLWEILNLARHRPYEG 118
FS VH + L +WMA E++ + +T K+D +SF + L+ IL EG
Sbjct: 173 FSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT------GEG 226
Query: 119 LTDLEVLENISHLHA--DDGEFIYLP--TPQTTKDILDLMNECWKRSPTERPSFTEI 171
D I ++ ++G +P P +++++L CW P +RP F+ I
Sbjct: 227 PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYI 280
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR---KFTTKSDVW 98
N L+ + +K+ DF + S M ++ + P WMA E + ++ K DVW
Sbjct: 145 NILLSEPGLVKLGDFGSASIMAPANXF-----VGTPY-WMAPEVILAMDEGQYDGKVDVW 198
Query: 99 SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
S G+T E LA +P L ++ + + H+ ++ L + ++ + ++ C
Sbjct: 199 SLGITCIE---LAERKP--PLFNMNAMSALYHIAQNESP--ALQSGHWSEYFRNFVDSCL 251
Query: 159 KRSPTERPS 167
++ P +RP+
Sbjct: 252 QKIPQDRPT 260
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI 139
++A E V ++D+WS GV + +L+ A P+ G T E L NI+ + D E
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS--PFLGDTKQETLANITAVSYDFDEEF 241
Query: 140 YLPTPQTTKDILD--LMNECWKR 160
+ T + KD + L+ E KR
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKR 264
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI 139
++A E V ++D+WS GV + +L+ A P+ G T E L NI+ + D E
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS--PFLGDTKQETLANITAVSYDFDEEF 241
Query: 140 YLPTPQTTKDILD--LMNECWKR 160
+ T + KD + L+ E KR
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKR 264
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N L+ + F KI+DF D + + ++ E + T KSDV+SFG
Sbjct: 169 NILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 102 VTLWEIL----NLARHRPYEGLTDLEVLENISHLHADDGEF--IYLPT------PQTTKD 149
V L+E+L + + P E + +L SH ++G+ I P P++ +
Sbjct: 229 VVLFEVLCARSAIVQSLPRE-MVNLAEWAVESH---NNGQLEQIVDPNLADKIRPESLRK 284
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
D +C S +RPS ++
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDV 306
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 24/128 (18%)
Query: 52 KISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRK--FTTKSDVWSFGVTLWEI 107
K++DF VH + L +WMA E++ + +T K+D +SF + L+ I
Sbjct: 169 KVADFGLSQQ-------SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 108 LNLARHRPYEGLTDLEVLENISHLHA--DDGEFIYLP--TPQTTKDILDLMNECWKRSPT 163
L EG D I ++ ++G +P P +++++L CW P
Sbjct: 222 LT------GEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIEL---CWSGDPK 272
Query: 164 ERPSFTEI 171
+RP F+ I
Sbjct: 273 KRPHFSYI 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 25 VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE 84
+ H LK + I + D KN + IK+ DF ++ D + P ++A E
Sbjct: 136 IAHFDLKPENIMLLD-KNIPIP---HIKLIDFGLAHEI--EDGVEFKNIFGTP-EFVAPE 188
Query: 85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP 144
V ++D+WS GV + +L+ A P+ G T E L NI+ + D E + T
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGAS--PFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 145 QTTKDILD--LMNECWKR 160
+ KD + L+ E KR
Sbjct: 247 ELAKDFIRKLLVKETRKR 264
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 25 VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE 84
+ H LK + I + D KN + IK+ DF ++ D + P ++A E
Sbjct: 136 IAHFDLKPENIMLLD-KNIPIP---HIKLIDFGLAHEI--EDGVEFKNIFGTP-EFVAPE 188
Query: 85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP 144
V ++D+WS GV + +L+ A P+ G T E L NI+ + D E + T
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGAS--PFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 145 QTTKDILD--LMNECWKR 160
+ KD + L+ E KR
Sbjct: 247 ELAKDFIRKLLVKETRKR 264
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI 139
++A E V ++D+WS GV + +L+ A P+ G T E L NI+ + D E
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGAS--PFLGDTKQETLANITSVSYDFDEEF 241
Query: 140 YLPTPQTTKDILD--LMNECWKR 160
+ T + KD + L+ E KR
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKR 264
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N L+ K IKI+DF + D + ++ P ++A E + +K+ D WSFG
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDA-KTNEFCGTP-DYIAPEILLGQKYNHSVDWWSFG 206
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENI 128
V L+E+ L P+ G + E+ +I
Sbjct: 207 VLLYEM--LIGQSPFHGQDEEELFHSI 231
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 25 VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE 84
+ H LK + I + D KN + IK+ DF ++ D + P ++A E
Sbjct: 136 IAHFDLKPENIMLLD-KNIPIP---HIKLIDFGLAHEI--EDGVEFKNIFGTP-EFVAPE 188
Query: 85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP 144
V ++D+WS GV + +L+ A P+ G T E L NI+ + D E + T
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGAS--PFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 145 QTTKDILD--LMNECWKR 160
+ KD + L+ E KR
Sbjct: 247 ELAKDFIRKLLVKETRKR 264
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
LR++ + L G+E+ +K + N L+ + K++DF +
Sbjct: 117 LRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGV-AGQL 175
Query: 64 SSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
+ + + P WMA E ++ + +D+WS G+T E +A +P D+
Sbjct: 176 TDXMAKRNXVIGTPF-WMAPEVIQEIGYNCVADIWSLGITAIE---MAEGKP--PYADIH 229
Query: 124 VLENISHLHADDGEFIYLPTPQTTK------DILDLMNECWKRSPTERPSFTEI 171
+ I + + P P K + D + +C +SP +R + T++
Sbjct: 230 PMRAIFMIPTN-------PPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQL 276
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 18 LLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLP 77
LL+ NG+ + ++ + +N L+ ++ E+KI+DF H+ +L
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL- 164
Query: 78 IRWMAWESVRL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL---------- 125
W V + +K++T D+WS G E++N A P G+++ + L
Sbjct: 165 --WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFP--GVSEADQLMRIFRILGTP 220
Query: 126 -----ENISHLHADDGEF-IYLPTPQTT------KDILDLMNECWKRSPTERPSFTEI-- 171
N++ L D F +Y P P + + +DL+++ K P +R + +
Sbjct: 221 NSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
Query: 172 HLFLQRKN 179
H + + N
Sbjct: 281 HAYFKENN 288
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV-----RLRKFTTKSD 96
N L +IK++DF + + R P WMA E V + R + K+D
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKAD 196
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
VWS G+TL E+ + P+ L + VL I+
Sbjct: 197 VWSLGITLIEMAEI--EPPHHELNPMRVLLKIA 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
A+ +++ +K G+ + LK N ++ + IKI+DF + D
Sbjct: 126 AAEISIGLFFLHKRGIIYRDLK--------LDNVMLDSEGHIKIADFGMCKEHMM-DGVT 176
Query: 70 VHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
+ P ++A E + + + D W++GV L+E+ LA P++G + E+ ++I
Sbjct: 177 TREFCGTP-DYIAPEIIAYQPYGKSVDWWAYGVLLYEM--LAGQPPFDGEDEDELFQSI 232
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 43/166 (25%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVWS 99
N L+ ++FE + DF M DY H ++ I +A E + K + K+DV+
Sbjct: 164 NILLDEEFEAVVGDFGLAKLM---DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFG 220
Query: 100 FGVTLWEIL------------------------NLARHRPYEGLTDLEVLENISHLHADD 135
+GV L E++ L + + E L D+++ N
Sbjct: 221 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD----- 275
Query: 136 GEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLG 181
+ + ++ + C + SP ERP +E+ L+ L
Sbjct: 276 ---------EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFA-TDSDMFSSDYY 68
A+ +A+ G+ + LK N ++ + IKI+DF +++
Sbjct: 127 AAEIAIGLFFLQSKGIIYRDLK--------LDNVMLDSEGHIKIADFGMCKENIWDGVTT 178
Query: 69 RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
+ T ++A E + + + D W+FGV L+E+ LA P+EG + E+ ++I
Sbjct: 179 KXFCGTP---DYIAPEIIAYQPYGKSVDWWAFGVLLYEM--LAGQAPFEGEDEDELFQSI 233
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 43/166 (25%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVWS 99
N L+ ++FE + DF M DY H ++ I +A E + K + K+DV+
Sbjct: 172 NILLDEEFEAVVGDFGLAKLM---DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFG 228
Query: 100 FGVTLWEIL------------------------NLARHRPYEGLTDLEVLENISHLHADD 135
+GV L E++ L + + E L D+++ N
Sbjct: 229 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD----- 283
Query: 136 GEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLG 181
+ + ++ + C + SP ERP +E+ L+ L
Sbjct: 284 ---------EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS-DMFSSDYYRVHDNTSLPI 78
+ K + H LK K N LV K + I+D S++ V +N +
Sbjct: 158 QGKPAIAHRDLKSK--------NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 79 -RWMAWE----SVRLRKFTT--KSDVWSFGVTLWEILN-------LARHRP--YEGLTDL 122
R+MA E ++++ F + + D+W+FG+ LWE+ + ++P Y+ + +
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 269
Query: 123 EVLENISHLHADDGEFIYLP----TPQTTKDILDLMNECWKRSPTER 165
E++ + D + +P + T + LM ECW ++P+ R
Sbjct: 270 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
A+ +A+ G+ + LK N ++ + IKI+DF + D
Sbjct: 448 AAEIAIGLFFLQSKGIIYRDLK--------LDNVMLDSEGHIKIADFGMCKENIW-DGVT 498
Query: 70 VHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
P ++A E + + + D W+FGV L+E+ LA P+EG + E+ ++I
Sbjct: 499 TKXFCGTP-DYIAPEIIAYQPYGKSVDWWAFGVLLYEM--LAGQAPFEGEDEDELFQSI 554
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS-DMFSSDYYRVHDNTSLPI 78
+ K + H LK K N LV K + I+D S++ V +N +
Sbjct: 129 QGKPAIAHRDLKSK--------NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 79 -RWMAWE----SVRLRKFTT--KSDVWSFGVTLWEILN-------LARHRP--YEGLTDL 122
R+MA E ++++ F + + D+W+FG+ LWE+ + ++P Y+ + +
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240
Query: 123 EVLENISHLHADDGEFIYLP----TPQTTKDILDLMNECWKRSPTER 165
E++ + D + +P + T + LM ECW ++P+ R
Sbjct: 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N L+ K IKI+DF + D + + P ++A E + +K+ D WSFG
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDA-KTNXFCGTP-DYIAPEILLGQKYNHSVDWWSFG 205
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENI 128
V L+E+ L P+ G + E+ +I
Sbjct: 206 VLLYEM--LIGQSPFHGQDEEELFHSI 230
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS-DMFSSDYYRVHDNTSLPI 78
+ K + H LK K N LV K + I+D S++ V +N +
Sbjct: 129 QGKPAIAHRDLKSK--------NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 79 -RWMAWE----SVRLRKFTT--KSDVWSFGVTLWEILN-------LARHRP--YEGLTDL 122
R+MA E ++++ F + + D+W+FG+ LWE+ + ++P Y+ + +
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240
Query: 123 EVLENISHLHADDGEFIYLP----TPQTTKDILDLMNECWKRSPTER 165
E++ + D + +P + T + LM ECW ++P+ R
Sbjct: 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA-----WESVRLRKFTTKSD 96
N L+ + +I+++DF + + R D+ WMA E+++ + K+D
Sbjct: 139 NVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVMCETMKDTPYDYKAD 196
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
+WS G+TL E+ + P+ L + VL I+ D + P+ + + D +
Sbjct: 197 IWSLGITLIEMAQI--EPPHHELNPMRVLLKIAK---SDPPTLLTPSKWSV-EFRDFLKI 250
Query: 157 CWKRSPTERPSFTEI 171
++P RPS ++
Sbjct: 251 ALDKNPETRPSAAQL 265
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA-----WESVRLRKFTTKSD 96
N L+ + +I+++DF + + R D+ WMA E+++ + K+D
Sbjct: 147 NVLMTLEGDIRLADFGVSAKNLKTLQKR--DSFIGTPYWMAPEVVMCETMKDTPYDYKAD 204
Query: 97 VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
+WS G+TL E+ + P+ L + VL I+ D + P+ + + D +
Sbjct: 205 IWSLGITLIEMAQI--EPPHHELNPMRVLLKIAK---SDPPTLLTPSKWSV-EFRDFLKI 258
Query: 157 CWKRSPTERPSFTEI 171
++P RPS ++
Sbjct: 259 ALDKNPETRPSAAQL 273
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 47 KKFEIKISDFATDSDMF---SSDYYRVHDNTSLPIRWMAWESVRL--RKFTTKSDVWSFG 101
K FEIK+ DF + + + +YY + P ++A E + + K D WS G
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY-FVAPEVLNTTNESYGPKCDAWSAG 263
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENI 128
V L +L A P+ G+ D + + +
Sbjct: 264 VLLHLLLMGA--VPFPGVNDADTISQV 288
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 43 CLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGV 102
C K +KI DF + + + +V T+ + A E V +D+W+ GV
Sbjct: 182 CETKKASSVKIIDFGLATKLNPDEIVKV---TTATAEFAAPEIVDREPVGFYTDMWAIGV 238
Query: 103 TLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP 162
+ +L+ P+ G DLE L+N+ D EF + + D + ++ P
Sbjct: 239 LGYVLLSGLS--PFAGEDDLETLQNVKRC---DWEFDEDAFSSVSPEAKDFIKNLLQKEP 293
Query: 163 TER 165
+R
Sbjct: 294 RKR 296
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 18 LLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLP 77
LL+ NG+ + ++ + +N L+ ++ E+KI+DF H+ +L
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL- 164
Query: 78 IRWMAWESVRL--RKFTTKSDVWSFGVTLWEILN 109
W V + +K++T D+WS G E++N
Sbjct: 165 --WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 33.1 bits (74), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N L+ + F KI+DF + + ++ E + T KSDV+SFG
Sbjct: 169 NILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 102 VTLWEIL----NLARHRPYEGLTDLEVLENISHLHADDGEF--IYLPT------PQTTKD 149
V L+E+L + + P E + +L SH ++G+ I P P++ +
Sbjct: 229 VVLFEVLCARSAIVQSLPRE-MVNLAEWAVESH---NNGQLEQIVDPNLADKIRPESLRK 284
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
D +C S +RPS ++
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDV 306
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 33.1 bits (74), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 18 LLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLP 77
LL+ NG+ + ++ + +N L+ ++ E+KI+DF H+ +L
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL- 164
Query: 78 IRWMAWESVRL--RKFTTKSDVWSFGVTLWEILN 109
W V + +K++T D+WS G E++N
Sbjct: 165 --WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 14/125 (11%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+N L+ K IKI+DF F+ V ++A E V + + D WSF
Sbjct: 135 ENILLDKNGHIKITDFG-----FAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
G+ ++E+ LA + P+ ++ E I L+A+ + P P +D+ DL++ R
Sbjct: 190 GILIYEM--LAGYTPFYDSNTMKTYEKI--LNAE----LRFP-PFFNEDVKDLLSRLITR 240
Query: 161 SPTER 165
++R
Sbjct: 241 DLSQR 245
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 27 HSSLKKKCIKIFDFKNCLVGKKF---EIKISD--FATDSDMFSSDYYRVHDNTSLPIR-- 79
S ++ C + D N L K ++K + F D D+ +D+ NT R
Sbjct: 134 ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD 193
Query: 80 -------WMAWESV-----RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLEN 127
WMA E V + R + K+DVWS G+TL E+ + P+ L + VL
Sbjct: 194 XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI--EPPHHELNPMRVLLK 251
Query: 128 IS 129
I+
Sbjct: 252 IA 253
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 27 HSSLKKKCIKIFDFKNCLVGKKF---EIKISD--FATDSDMFSSDYYRVHDNTSLPIR-- 79
S ++ C + D N L K ++K + F D D+ +D+ NT R
Sbjct: 134 ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD 193
Query: 80 -------WMAWESV-----RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLEN 127
WMA E V + R + K+DVWS G+TL E+ + P+ L + VL
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI--EPPHHELNPMRVLLK 251
Query: 128 IS 129
I+
Sbjct: 252 IA 253
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 27 HSSLKKKCIKIFDFKNCLVGKKF---EIKISD--FATDSDMFSSDYYRVHDNTSLPIR-- 79
S ++ C + D N L K ++K + F D D+ +D+ NT R
Sbjct: 134 ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 193
Query: 80 -------WMAWESV-----RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLEN 127
WMA E V + R + K+DVWS G+TL E+ + P+ L + VL
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI--EPPHHELNPMRVLLK 251
Query: 128 IS 129
I+
Sbjct: 252 IA 253
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N + K +K+ DF + + + D + P +M+ E + + KSD+WS G
Sbjct: 146 NVFLDGKQNVKLGDFGL-ARILNHDEDFAKEFVGTPY-YMSPEQMNRMSYNEKSDIWSLG 203
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
L+E+ L P+ + E+ I +G+F +P + + ++ +++
Sbjct: 204 CLLYELCALM--PPFTAFSQKELAGKIR-----EGKFRRIPY-RYSDELNEIITRMLNLK 255
Query: 162 PTERPSFTEI 171
RPS EI
Sbjct: 256 DYHRPSVEEI 265
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 20/163 (12%)
Query: 21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
+ GV H +K I L+ +K+SDF + + S D + P W
Sbjct: 158 HAQGVIHRDIKSDSI--------LLTLDGRVKLSDFGFCAQI-SKDVPKRKXLVGTPY-W 207
Query: 81 MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
MA E + + T+ D+WS G+ + E+++ PY + ++ ++ + D
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVD--GEPPYFSDSPVQAMKRLR-----DSPPPK 260
Query: 141 LPTPQTTKDIL-DLMNECWKRSPTERPSFTEI--HLFLQRKNL 180
L +L D + R P ER + E+ H FL + L
Sbjct: 261 LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGL 303
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N + K +K+ DF + + + D P +M+ E + + KSD+WS G
Sbjct: 146 NVFLDGKQNVKLGDFGL-ARILNHDTSFAKTFVGTPY-YMSPEQMNRMSYNEKSDIWSLG 203
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
L+E+ L P+ + E+ I +G+F +P + + ++ +++
Sbjct: 204 CLLYELCALM--PPFTAFSQKELAGKIR-----EGKFRRIPY-RYSDELNEIITRMLNLK 255
Query: 162 PTERPSFTEI 171
RPS EI
Sbjct: 256 DYHRPSVEEI 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 42 NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
N + K +K+ DF + + + D P +M+ E + + KSD+WS G
Sbjct: 146 NVFLDGKQNVKLGDFGL-ARILNHDTSFAKAFVGTPY-YMSPEQMNRMSYNEKSDIWSLG 203
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
L+E+ L P+ + E+ I +G+F +P + + ++ +++
Sbjct: 204 CLLYELCALM--PPFTAFSQKELAGKIR-----EGKFRRIPY-RYSDELNEIITRMLNLK 255
Query: 162 PTERPSFTEI 171
RPS EI
Sbjct: 256 DYHRPSVEEI 265
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 51 IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNL 110
IK+ DF + F SDY+ NT ++ A E + + SD+WSFG L E+
Sbjct: 201 IKLIDFGCAT--FKSDYHGSIINTR---QYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Query: 111 A-RHRPYEGLTDLEVLENI 128
+ R +E + L ++E+I
Sbjct: 256 SLLFRTHEHMEHLAMMESI 274
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV 70
S L + L N+ GV H +K I L+ IK+SDF + + S + +
Sbjct: 149 SVLRALSYLHNQ-GVIHRDIKSDSI--------LLTSDGRIKLSDFGFCAQV-SKEVPKR 198
Query: 71 HDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
P WMA E + + T+ D+WS G+ + E+++
Sbjct: 199 KXLVGTPY-WMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 40 FKNCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
N L+ + IKI+DF AT M +Y + P +++ E +SDV
Sbjct: 140 LSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTP-NYISPEIATRSAHGLESDV 195
Query: 98 WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
WS G + +L + R P++ T L + + F+ + DL+++
Sbjct: 196 WSLGCMFYTLL-IGR-PPFDTDTVKNTLNKVVLADYEMPSFLSIEAK-------DLIHQL 246
Query: 158 WKRSPTERPSFTEI--HLFLQR 177
+R+P +R S + + H F+ R
Sbjct: 247 LRRNPADRLSLSSVLDHPFMSR 268
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 22/132 (16%)
Query: 51 IKISDF----ATDSD------MFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
+K+ DF A D D + Y H +M+ E + ++ K D++S
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT-PQTTKDILDLMNECWK 159
G+ L+E+L Y T +E + I+ + ++ PQ + D+++
Sbjct: 263 GLILFELL-------YSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSP--- 312
Query: 160 RSPTERPSFTEI 171
SPTERP T+I
Sbjct: 313 -SPTERPEATDI 323
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 123 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 211
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWM 81
G H S+K I L+ ++ +S ++ M S + VHD ++ +
Sbjct: 148 GYVHRSVKASHI--------LISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199
Query: 82 AWESVR-----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL 125
W S L+ + KSD++S G+T E+ N H P++ + ++L
Sbjct: 200 PWLSPEVLQQNLQGYDAKSDIYSVGITACELAN--GHVPFKDMPATQML 246
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWM 81
G H S+K I L+ ++ +S ++ M S + VHD ++ +
Sbjct: 132 GYVHRSVKASHI--------LISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 183
Query: 82 AWESVR-----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL 125
W S L+ + KSD++S G+T E+ N H P++ + ++L
Sbjct: 184 PWLSPEVLQQNLQGYDAKSDIYSVGITACELAN--GHVPFKDMPATQML 230
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 125 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
G+ H +K + N L+ ++ +KISDF + ++ R+ + + ++A
Sbjct: 124 GITHRDIKPE--------NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 84 ESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTD 121
E ++ R+F + DVWS G+ L + LA P++ +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSD 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
F+ SDV++ G T+W L+ AR P++ ++ + G L K+I
Sbjct: 220 FSKHSDVFALG-TIWYELH-AREWPFKTQPAEAIIWQMG-----TGMKPNLSQIGMGKEI 272
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQR 177
D++ CW ERP+FT++ L++
Sbjct: 273 SDILLFCWAFEQEERPTFTKLMDMLEK 299
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 118 GLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
G+ ++ ++ +H+H F+ L TP K + +LM E WK + T E+ LF +
Sbjct: 80 GVNAIQGMDGSAHIHRK-MLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEA 138
Query: 178 KNL 180
K +
Sbjct: 139 KEI 141
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 10 ASNLAVVPLLR--NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY 67
A LAV+ L + GV H +K I L+ +K+SDF + + S +
Sbjct: 174 AVCLAVLQALSVLHAQGVIHRDIKSDSI--------LLTHDGRVKLSDFGFCAQV-SKEV 224
Query: 68 YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
R P WMA E + + + D+WS G+ + E+++
Sbjct: 225 PRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVD 265
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 30.0 bits (66), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 24 GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI-RWMA 82
G+ H K + +N L+ + E+K+ DF + + + R NT + WMA
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR---NTFIGTPYWMA 197
Query: 83 WESVRLRK-----FTTKSDVWSFGVTLWEILNLA 111
E + + + KSD+WS G+T E+ A
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 27/143 (18%)
Query: 41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKS-DVWS 99
+N ++ + F IK+ DF + + + + T I + A E + + ++WS
Sbjct: 159 ENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGT---IEYCAPEVLMGNPYRGPELEMWS 215
Query: 100 FGVTLW-------------EILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
GVTL+ E + A H PY L E++ +S L P P+
Sbjct: 216 LGVTLYTLVFEENPFCELEETVEAAIHPPY--LVSKELMSLVSGLLQ--------PVPER 265
Query: 147 TKDILDLMNECWKRSPTERPSFT 169
+ L+ + W P +T
Sbjct: 266 RTTLEKLVTDPWVTQPVNLADYT 288
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
GV H +K I L+ +K+SDF + + S + R P WMA
Sbjct: 266 QGVIHRDIKSDSI--------LLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPY-WMA 315
Query: 83 WESVRLRKFTTKSDVWSFGVTLWEILN 109
E + + + D+WS G+ + E+++
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVD 342
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 10 ASNLAVVPLLR--NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY 67
A LAV+ L + GV H +K I L+ +K+SDF + + S +
Sbjct: 129 AVCLAVLQALSVLHAQGVIHRDIKSDSI--------LLTHDGRVKLSDFGFCAQV-SKEV 179
Query: 68 YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
R P WMA E + + + D+WS G+ + E+++
Sbjct: 180 PRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVD 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 10 ASNLAVVPLLR--NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY 67
A LAV+ L + GV H +K I L+ +K+SDF + + S +
Sbjct: 124 AVCLAVLQALSVLHAQGVIHRDIKSDSI--------LLTHDGRVKLSDFGFCAQV-SKEV 174
Query: 68 YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
R P WMA E + + + D+WS G+ + E+++
Sbjct: 175 PRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVD 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 10 ASNLAVVPLLR--NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY 67
A LAV+ L + GV H +K I L+ +K+SDF + + S +
Sbjct: 131 AVCLAVLQALSVLHAQGVIHRDIKSDSI--------LLTHDGRVKLSDFGFCAQV-SKEV 181
Query: 68 YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
R P WMA E + + + D+WS G+ + E+++
Sbjct: 182 PRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVD 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 10 ASNLAVVPLLR--NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY 67
A LAV+ L + GV H +K I L+ +K+SDF + + S +
Sbjct: 120 AVCLAVLQALSVLHAQGVIHRDIKSDSI--------LLTHDGRVKLSDFGFCAQV-SKEV 170
Query: 68 YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
R P WMA E + + + D+WS G+ + E+++
Sbjct: 171 PRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVD 211
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 94 KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDL 153
K D+WS GVTL+ I P+EG ++ ENI G+ Y + DL
Sbjct: 193 KVDIWSAGVTLYNITT--GLYPFEGDNIYKLFENI-------GKGSYAIPGDCGPPLSDL 243
Query: 154 MNECWKRSPTERPSFTEI 171
+ + P +R S +I
Sbjct: 244 LKGMLEYEPAKRFSIRQI 261
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 40 FKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL--RKFTTKSDV 97
+N L+ + ++DF + + + R +D I +MA + VR D
Sbjct: 187 LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG-TIEYMAPDIVRGGDSGHDKAVDW 245
Query: 98 WSFGVTLWEILNLA 111
WS GV ++E+L A
Sbjct: 246 WSLGVLMYELLTGA 259
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 32/115 (27%)
Query: 22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS-DYYRVHD-------- 72
++G+ H LK NCL+ + +KI DF + S D + V+D
Sbjct: 149 ESGIIHRDLKPA--------NCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 73 -------------NTSLPIRWM-AWESVRLRK-FTTKSDVWSFGVTLWEILNLAR 112
+ + RW A E + L++ +T D+WS G E+LN+ +
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 29/112 (25%)
Query: 22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS-DYYRVHD-------- 72
++G+ H LK NCL+ + +K+ DF + S D V+D
Sbjct: 147 ESGIIHRDLKPA--------NCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 73 ----------NTSLPIRWM-AWESVRLRKFTTKS-DVWSFGVTLWEILNLAR 112
+ + RW A E + L++ TKS D+WS G E+LN+ +
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR 79
+ K + H LK K I + C + D ATD+ + ++ RV R
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH-RVGTK-----R 216
Query: 80 WMAWE----SVRLRKFTT--KSDVWSFGVTLWEI 107
+MA E S+ ++ F + ++D+++ G+ WEI
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 50 EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
++KI DF + + +D R +L R+M+ E + + + + D+++ G+ L E+L+
Sbjct: 174 QVKIGDFGLVTSL-KNDGKRTRSKGTL--RYMSPEQISSQDYGKEVDLYALGLILAELLH 230
Query: 110 LA 111
+
Sbjct: 231 VC 232
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 50 EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN 109
++KI DF + + +D R +L R+M+ E + + + + D+++ G+ L E+L+
Sbjct: 160 QVKIGDFGLVTSL-KNDGKRXRSKGTL--RYMSPEQISSQDYGKEVDLYALGLILAELLH 216
Query: 110 LARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFT 169
+ T E + + L I+ +T L+ + + P +RP+ +
Sbjct: 217 VCD-------TAFETSKFFTDLRDGIISDIFDKKEKT------LLQKLLSKKPEDRPNTS 263
Query: 170 EI 171
EI
Sbjct: 264 EI 265
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR 79
+ K + H LK K I + C + D ATD+ + ++ RV R
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH-RVGTK-----R 203
Query: 80 WMAWE----SVRLRKFTT--KSDVWSFGVTLWEI 107
+MA E S+ ++ F + ++D+++ G+ WEI
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR 79
+ K + H LK K I + C + D ATD+ + ++ RV R
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH-RVGTK-----R 178
Query: 80 WMAWE----SVRLRKFTT--KSDVWSFGVTLWEI 107
+MA E S+ ++ F + ++D+++ G+ WEI
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR 79
+ K + H LK K I + C + D ATD+ + ++ RV R
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH-RVGTK-----R 180
Query: 80 WMAWE----SVRLRKFTT--KSDVWSFGVTLWEI 107
+MA E S+ ++ F + ++D+++ G+ WEI
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR 79
+ K + H LK K I + C + D ATD+ + ++ RV R
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH-RVGTK-----R 183
Query: 80 WMAWE----SVRLRKFTT--KSDVWSFGVTLWEI 107
+MA E S+ ++ F + ++D+++ G+ WEI
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1TZ9|A Chain A, Crystal Structure Of The Putative Mannonate Dehydratase
From Enterococcus Faecalis, Northeast Structural
Genomics Target Efr41
pdb|1TZ9|B Chain B, Crystal Structure Of The Putative Mannonate Dehydratase
From Enterococcus Faecalis, Northeast Structural
Genomics Target Efr41
Length = 367
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 55 DFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHR 114
D A + D Y++ + S R WE RL++F ++ GVT +++ R+
Sbjct: 141 DQAVVENXQPEDXYQLIHSQSKGFRLPGWEEERLQQFQELKAXYA-GVTEEDLVENLRYF 199
Query: 115 PYEGLTDLEVLENIS-HLHADDGEFIYLPTPQTTKDILDL 153
E + + ENI +H DD + P+ TK++ DL
Sbjct: 200 -LERVIPVCEEENIKXGIHPDDPPWEIFGLPRITKNLADL 238
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 20 RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR 79
+ K + H LK K I + C + D ATD+ + ++ RV R
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH-RVGTK-----R 177
Query: 80 WMAWE----SVRLRKFTT--KSDVWSFGVTLWEI 107
+MA E S+ ++ F + ++D+++ G+ WEI
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEIL 108
++++A E + +K+T D WSFG +E +
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECI 218
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 26.6 bits (57), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEIL 108
++++A E + +K+T D WSFG +E +
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECI 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,046,027
Number of Sequences: 62578
Number of extensions: 250570
Number of successful extensions: 1557
Number of sequences better than 100.0: 524
Number of HSP's better than 100.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 652
Number of HSP's gapped (non-prelim): 531
length of query: 188
length of database: 14,973,337
effective HSP length: 93
effective length of query: 95
effective length of database: 9,153,583
effective search space: 869590385
effective search space used: 869590385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)