Your job contains 1 sequence.
>psy4335
MVQCLAFRDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTR
FKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK
RLTHGDQQIPGGRKSKVLSSPENLKVTSTSKC
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4335
(152 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0004867 - symbol:RpS2 "Ribosomal protein S2" speci... 562 2.1e-54 1
UNIPROTKB|E1C4M0 - symbol:E1C4M0 "Uncharacterized protein... 545 1.3e-52 1
UNIPROTKB|O18789 - symbol:RPS2 "40S ribosomal protein S2"... 542 2.7e-52 1
UNIPROTKB|E2QWY6 - symbol:LOC608162 "Uncharacterized prot... 542 2.7e-52 1
UNIPROTKB|E9PMM9 - symbol:RPS2 "40S ribosomal protein S2"... 542 2.7e-52 1
UNIPROTKB|P15880 - symbol:RPS2 "40S ribosomal protein S2"... 542 2.7e-52 1
RGD|2323085 - symbol:LOC100359960 "ribosomal protein S2-l... 542 2.7e-52 1
RGD|619887 - symbol:Rps2 "ribosomal protein S2" species:1... 542 2.7e-52 1
UNIPROTKB|E9PTY3 - symbol:LOC100359960 "Protein LOC100359... 542 2.7e-52 1
UNIPROTKB|E9PU05 - symbol:LOC100359960 "Protein LOC100359... 542 2.7e-52 1
UNIPROTKB|E9PPT0 - symbol:RPS2 "40S ribosomal protein S2"... 538 7.2e-52 1
UNIPROTKB|E9PT76 - symbol:E9PT76 "Uncharacterized protein... 538 7.2e-52 1
ZFIN|ZDB-GENE-040426-2454 - symbol:rps2 "ribosomal protei... 538 7.2e-52 1
UNIPROTKB|E9PSQ6 - symbol:LOC100359960 "Protein LOC100359... 537 9.2e-52 1
MGI|MGI:3643826 - symbol:Gm8225 "predicted gene 8225" spe... 525 1.7e-50 1
RGD|1588815 - symbol:LOC688473 "similar to 40S ribosomal ... 521 4.6e-50 1
TAIR|locus:2103539 - symbol:AT3G57490 species:3702 "Arabi... 517 1.2e-49 1
TAIR|locus:2016585 - symbol:XW6 species:3702 "Arabidopsis... 509 8.5e-49 1
TAIR|locus:504956181 - symbol:AT1G58684 species:3702 "Ara... 509 8.5e-49 1
TAIR|locus:2826988 - symbol:AT1G58983 species:3702 "Arabi... 509 8.5e-49 1
TAIR|locus:2826968 - symbol:AT1G59359 species:3702 "Arabi... 509 8.5e-49 1
TAIR|locus:2054406 - symbol:AT2G41840 species:3702 "Arabi... 505 2.3e-48 1
RGD|1562399 - symbol:RGD1562399 "similar to 40S ribosomal... 496 2.0e-47 1
UNIPROTKB|F1LUI9 - symbol:F1LUI9 "Uncharacterized protein... 490 8.8e-47 1
UNIPROTKB|F1LZV8 - symbol:F1LZV8 "Uncharacterized protein... 490 8.8e-47 1
UNIPROTKB|J9P0D3 - symbol:J9P0D3 "Uncharacterized protein... 482 6.2e-46 1
RGD|1560789 - symbol:RGD1560789 "similar to ribosomal pro... 471 9.1e-45 1
UNIPROTKB|E9PM36 - symbol:RPS2 "40S ribosomal protein S2"... 468 1.9e-44 1
UNIPROTKB|I3L404 - symbol:RPS2 "40S ribosomal protein S2"... 467 2.4e-44 1
GENEDB_PFALCIPARUM|PF14_0448 - symbol:PF14_0448 "ribosoma... 466 3.1e-44 1
UNIPROTKB|Q8IL02 - symbol:PF14_0448 "40S ribosomal protei... 466 3.1e-44 1
WB|WBGene00004471 - symbol:rps-2 species:6239 "Caenorhabd... 463 6.4e-44 1
DICTYBASE|DDB_G0293742 - symbol:rps2 "ribosomal protein S... 451 1.2e-42 1
POMBASE|SPCC576.08c - symbol:rps2 "40S ribosomal protein ... 451 1.2e-42 1
ASPGD|ASPL0000036430 - symbol:AN3413 species:162425 "Emer... 440 1.7e-41 1
UNIPROTKB|G4MPT3 - symbol:MGG_16248 "30S ribosomal protei... 440 1.7e-41 1
UNIPROTKB|F1LVB4 - symbol:F1LVB4 "Uncharacterized protein... 436 4.6e-41 1
UNIPROTKB|F1M5X9 - symbol:F1M5X9 "Uncharacterized protein... 432 1.2e-40 1
CGD|CAL0004119 - symbol:RPS21 species:5476 "Candida albic... 415 7.8e-39 1
UNIPROTKB|E2QWF1 - symbol:E2QWF1 "Uncharacterized protein... 400 3.0e-37 1
SGD|S000003091 - symbol:RPS2 "Protein component of the sm... 399 3.9e-37 1
UNIPROTKB|J9PAX1 - symbol:J9PAX1 "Uncharacterized protein... 383 1.9e-35 1
UNIPROTKB|I3LJ87 - symbol:RPS2 "Uncharacterized protein" ... 383 1.9e-35 1
UNIPROTKB|J9P3M6 - symbol:J9P3M6 "Uncharacterized protein... 360 5.2e-33 1
UNIPROTKB|F1S275 - symbol:F1S275 "Uncharacterized protein... 342 4.2e-31 1
UNIPROTKB|F1LUJ6 - symbol:F1LUJ6 "Uncharacterized protein... 325 2.7e-29 1
UNIPROTKB|H0YEN5 - symbol:RPS2 "40S ribosomal protein S2"... 306 2.8e-27 1
UNIPROTKB|E9PTW0 - symbol:E9PTW0 "Uncharacterized protein... 305 3.5e-27 1
UNIPROTKB|E9PQD7 - symbol:RPS2 "40S ribosomal protein S2"... 241 2.1e-20 1
UNIPROTKB|F1M474 - symbol:F1M474 "Uncharacterized protein... 233 1.5e-19 1
UNIPROTKB|F1PW41 - symbol:F1PW41 "Uncharacterized protein... 220 3.6e-18 1
RGD|1586357 - symbol:LOC689943 "similar to 40S ribosomal ... 198 7.7e-16 1
RGD|1589430 - symbol:LOC680646 "similar to 40S ribosomal ... 193 2.6e-15 1
UNIPROTKB|F1M7B2 - symbol:F1M7B2 "Uncharacterized protein... 187 1.1e-14 1
UNIPROTKB|F1LUE4 - symbol:F1LUE4 "Uncharacterized protein... 168 1.2e-12 1
UNIPROTKB|F1LUA6 - symbol:F1LUA6 "Uncharacterized protein... 166 1.9e-12 1
UNIPROTKB|H3BNG3 - symbol:RPS2 "40S ribosomal protein S2"... 137 2.2e-09 1
TIGR_CMR|BA_0127 - symbol:BA_0127 "ribosomal protein S5" ... 132 7.6e-09 1
TIGR_CMR|GSU_2840 - symbol:GSU_2840 "ribosomal protein S5... 120 1.4e-07 1
TIGR_CMR|CHY_2292 - symbol:CHY_2292 "ribosomal protein S5... 110 1.7e-06 1
TAIR|locus:2057645 - symbol:EMB3113 "EMBRYO DEFECTIVE 311... 113 3.5e-06 1
TIGR_CMR|DET_0491 - symbol:DET_0491 "ribosomal protein S5... 103 0.00010 1
TIGR_CMR|SPO_0502 - symbol:SPO_0502 "ribosomal protein S5... 103 0.00016 1
UNIPROTKB|Q9KP01 - symbol:rpsE "30S ribosomal protein S5"... 100 0.00028 1
TIGR_CMR|VC_2579 - symbol:VC_2579 "ribosomal protein S5" ... 100 0.00028 1
TIGR_CMR|CJE_1858 - symbol:CJE_1858 "ribosomal protein S5... 96 0.00050 1
UNIPROTKB|P0A7W1 - symbol:rpsE "30S ribosomal subunit pro... 97 0.00081 1
>FB|FBgn0004867 [details] [associations]
symbol:RpS2 "Ribosomal protein S2" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0007275 GO:GO:0030154
EMBL:AE014134 GO:GO:0005811 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0048477 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
OMA:GIKDVWT CTD:6187 GeneTree:ENSGT00390000001433 EMBL:U01334
EMBL:U01335 EMBL:X69120 EMBL:AY094799 PIR:S30395 RefSeq:NP_476874.1
UniGene:Dm.3451 ProteinModelPortal:P31009 SMR:P31009 DIP:DIP-18767N
IntAct:P31009 MINT:MINT-769241 STRING:P31009 PaxDb:P31009
PRIDE:P31009 EnsemblMetazoa:FBtr0079905 EnsemblMetazoa:FBtr0330682
GeneID:34309 KEGG:dme:Dmel_CG5920 FlyBase:FBgn0004867
InParanoid:P31009 OrthoDB:EOG4TX97W PhylomeDB:P31009
GenomeRNAi:34309 NextBio:787861 Bgee:P31009 GermOnline:CG5920
Uniprot:P31009
Length = 267
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 113/138 (81%), Positives = 124/138 (89%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
R+GKI+SLE+IYL+SLPIKEFEIIDFF+GSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 54 REGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 113
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD+NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK G
Sbjct: 114 GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGS 173
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 174 VSVRLIPAPRGTGIVSAP 191
>UNIPROTKB|E1C4M0 [details] [associations]
symbol:E1C4M0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0017134 "fibroblast growth factor binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020 OMA:GIKDVWT
GeneTree:ENSGT00390000001433 EMBL:AADN02023671 IPI:IPI00572788
PRIDE:E1C4M0 Ensembl:ENSGALT00000008816 Uniprot:E1C4M0
Length = 286
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 110/138 (79%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+GSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 64 KDMKIKSLEEIYLFSLPIKESEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 123
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 124 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 183
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 184 VLVRLIPAPRGTGIVSAP 201
>UNIPROTKB|O18789 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9913 "Bos
taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0017134 "fibroblast growth factor binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:GIKDVWT
EMBL:BC102227 EMBL:AF013215 IPI:IPI00695732 RefSeq:NP_001028785.1
UniGene:Bt.48814 ProteinModelPortal:O18789 SMR:O18789 STRING:O18789
PRIDE:O18789 Ensembl:ENSBTAT00000012544 GeneID:286867
KEGG:bta:286867 CTD:6187 GeneTree:ENSGT00390000001433
HOVERGEN:HBG000437 InParanoid:O18789 OrthoDB:EOG4SXND8
NextBio:20806516 Uniprot:O18789
Length = 293
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 131 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 190
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 191 VLVRLIPAPRGTGIVSAP 208
>UNIPROTKB|E2QWY6 [details] [associations]
symbol:LOC608162 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020 OMA:GIKDVWT
GeneTree:ENSGT00390000001433 EMBL:AAEX03004635
Ensembl:ENSCAFT00000030964 Uniprot:E2QWY6
Length = 293
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 131 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 190
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 191 VLVRLIPAPRGTGIVSAP 208
>UNIPROTKB|E9PMM9 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00985370
ProteinModelPortal:E9PMM9 SMR:E9PMM9 PRIDE:E9PMM9
Ensembl:ENST00000527302 ArrayExpress:E9PMM9 Bgee:E9PMM9
Uniprot:E9PMM9
Length = 218
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 131 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 190
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 191 VLVRLIPAPRGTGIVSAP 208
>UNIPROTKB|P15880 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0017134 "fibroblast growth factor binding" evidence=IPI]
[GO:0006412 "translation" evidence=IC;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 Reactome:REACT_116125 GO:GO:0005654
GO:GO:0000184 GO:GO:0006413 Gene3D:3.30.160.20 GO:GO:0003723
EMBL:CH471112 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006415 GO:GO:0006414
GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:GIKDVWT
CTD:6187 HOVERGEN:HBG000437 OrthoDB:EOG4SXND8 EMBL:X17206
EMBL:AK312173 EMBL:BC001795 EMBL:BC006559 EMBL:BC008862
EMBL:BC010165 EMBL:BC012354 EMBL:BC016178 EMBL:BC016951
EMBL:BC018993 EMBL:BC021545 EMBL:BC023541 EMBL:BC025677
EMBL:BC066321 EMBL:BC068051 EMBL:BC071922 EMBL:BC071923
EMBL:BC071924 EMBL:BC073966 EMBL:BC075830 EMBL:BC103756
EMBL:BC105985 IPI:IPI00013485 PIR:S08228 RefSeq:NP_002943.2
UniGene:Hs.356366 UniGene:Hs.381079 UniGene:Hs.498569
UniGene:Hs.506997 ProteinModelPortal:P15880 SMR:P15880
IntAct:P15880 MINT:MINT-3008399 STRING:P15880 PhosphoSite:P15880
DMDM:1710756 PaxDb:P15880 PRIDE:P15880 DNASU:6187
Ensembl:ENST00000343262 GeneID:6187 KEGG:hsa:6187 UCSC:uc002cnn.2
GeneCards:GC16M002012 H-InvDB:HIX0029256 H-InvDB:HIX0039223
H-InvDB:HIX0202579 HGNC:HGNC:10404 MIM:603624 neXtProt:NX_P15880
PharmGKB:PA34806 InParanoid:P15880 PhylomeDB:P15880 GenomeRNAi:6187
NextBio:24025 ArrayExpress:P15880 Bgee:P15880 CleanEx:HS_RPS2
Genevestigator:P15880 GermOnline:ENSG00000140988 Uniprot:P15880
Length = 293
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 131 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 190
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 191 VLVRLIPAPRGTGIVSAP 208
>RGD|2323085 [details] [associations]
symbol:LOC100359960 "ribosomal protein S2-like" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 EMBL:CH473948 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
Ensembl:ENSRNOT00000035386 Uniprot:G3V957
Length = 267
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 45 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 104
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 105 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 164
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 165 VLVRLIPAPRGTGIVSAP 182
>RGD|619887 [details] [associations]
symbol:Rps2 "ribosomal protein S2" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IMP] [GO:0001731 "formation of translation preinitiation
complex" evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO;IMP]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0017134 "fibroblast
growth factor binding" evidence=ISO] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=IMP] [GO:0071353 "cellular response to interleukin-4"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 RGD:619887 GO:GO:0032403 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000028 GO:GO:0001731
GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
CTD:6187 GeneTree:ENSGT00390000001433 HOVERGEN:HBG000437
EMBL:X57432 EMBL:BC098726 IPI:IPI00392390 PIR:S18828
RefSeq:NP_114026.3 UniGene:Rn.2115 UniGene:Rn.220062
ProteinModelPortal:P27952 SMR:P27952 IntAct:P27952 STRING:P27952
PhosphoSite:P27952 PRIDE:P27952 Ensembl:ENSRNOT00000019508
GeneID:83789 KEGG:rno:83789 UCSC:RGD:619887 InParanoid:P27952
OMA:DSEGHIG NextBio:616365 ArrayExpress:P27952
Genevestigator:P27952 GermOnline:ENSRNOG00000014179 Uniprot:P27952
Length = 293
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 131 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 190
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 191 VLVRLIPAPRGTGIVSAP 208
>UNIPROTKB|E9PTY3 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
IPI:IPI00951764 Ensembl:ENSRNOT00000067137 ArrayExpress:E9PTY3
Uniprot:E9PTY3
Length = 297
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 131 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 190
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 191 VLVRLIPAPRGTGIVSAP 208
>UNIPROTKB|E9PU05 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 IPI:IPI00781732
Ensembl:ENSRNOT00000002656 ArrayExpress:E9PU05 Uniprot:E9PU05
Length = 259
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/138 (78%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 37 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 96
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 97 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 156
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 157 VLVRLIPAPRGTGIVSAP 174
>UNIPROTKB|E9PPT0 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
GO:GO:0015935 EMBL:AC005363 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00977651
ProteinModelPortal:E9PPT0 SMR:E9PPT0 PRIDE:E9PPT0
Ensembl:ENST00000530225 ArrayExpress:E9PPT0 Bgee:E9PPT0
Uniprot:E9PPT0
Length = 197
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 103/113 (91%), Positives = 110/113 (97%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK
Sbjct: 131 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCK 183
>UNIPROTKB|E9PT76 [details] [associations]
symbol:E9PT76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433
IPI:IPI00562369 Ensembl:ENSRNOT00000043480 OMA:DSKEWIP
Uniprot:E9PT76
Length = 223
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 108/137 (78%), Positives = 119/137 (86%)
Query: 11 KIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDS 70
KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 61
Query: 71 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTHGD---- 126
NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 62 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVAVTGRCGSV 121
Query: 127 --QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 122 LVRLIPAPRGTGIVSAP 138
>ZFIN|ZDB-GENE-040426-2454 [details] [associations]
symbol:rps2 "ribosomal protein S2" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 ZFIN:ZDB-GENE-040426-2454
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
TIGRFAMs:TIGR01020 OMA:GIKDVWT CTD:6187
GeneTree:ENSGT00390000001433 HOVERGEN:HBG000437 OrthoDB:EOG4SXND8
EMBL:CR392027 EMBL:BC067645 IPI:IPI00493658 RefSeq:NP_998444.1
UniGene:Dr.32854 SMR:Q6NWC3 STRING:Q6NWC3
Ensembl:ENSDART00000110842 Ensembl:ENSDART00000138107 GeneID:406565
KEGG:dre:406565 InParanoid:Q6NWC3 NextBio:20818125 Uniprot:Q6NWC3
Length = 280
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 107/138 (77%), Positives = 121/138 (87%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYL+SLPIKE EIIDFF+GS+LKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 57 KDMKIKSLEEIYLYSLPIKESEIIDFFLGSALKDEVLKIMPVQKQTRAGQRTRFKAFVAI 116
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCK G
Sbjct: 117 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGRCGS 176
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 177 VLVRLIPAPRGTGIVSAP 194
>UNIPROTKB|E9PSQ6 [details] [associations]
symbol:LOC100359960 "Protein LOC100359960" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:2323085 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
IPI:IPI00568581 Ensembl:ENSRNOT00000048967 ArrayExpress:E9PSQ6
Uniprot:E9PSQ6
Length = 221
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 108/135 (80%), Positives = 119/135 (88%)
Query: 11 KIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDS 70
KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 61
Query: 71 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD--- 126
NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 62 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLV 121
Query: 127 QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 122 RLIPAPRGTGIVSAP 136
>MGI|MGI:3643826 [details] [associations]
symbol:Gm8225 "predicted gene 8225" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005840 "ribosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 MGI:MGI:3643826 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
HOGENOM:HOG000072596 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 EMBL:AC122252
IPI:IPI00875177 ProteinModelPortal:D3Z536 SMR:D3Z536 PRIDE:D3Z536
Ensembl:ENSMUST00000090257 OMA:LMASIDD Bgee:D3Z536 Uniprot:D3Z536
Length = 292
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 108/151 (71%), Positives = 123/151 (81%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EI DFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFV I
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEITDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVVI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD +GH+ LGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G
Sbjct: 131 GDYDGHVDLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGS 190
Query: 127 ---QQIPGGRKSKVLSSP--ENLKVTSTSKC 152
+ IP R + ++S+P + L + S C
Sbjct: 191 VLVRLIPAPRGTGIVSAPVPKKLLMASIDDC 221
>RGD|1588815 [details] [associations]
symbol:LOC688473 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1588815 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 IPI:IPI00958659
PRIDE:D3ZIY7 Ensembl:ENSRNOT00000060074 UCSC:RGD:1588815
OMA:CAGQRIR Uniprot:D3ZIY7
Length = 269
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 106/138 (76%), Positives = 118/138 (85%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQ AGQRTRFKAFVAI
Sbjct: 47 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQILAGQRTRFKAFVAI 106
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPV RGYWGN IGKPHTVPCK H G
Sbjct: 107 GDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVWRGYWGNTIGKPHTVPCKVTGHCGS 166
Query: 127 ---QQIPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 167 VLMRLIPTPRGTGIVSAP 184
>TAIR|locus:2103539 [details] [associations]
symbol:AT3G57490 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 EMBL:AL133248
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HSSP:P02357 HOGENOM:HOG000072596
KO:K02981 ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:BT006200
EMBL:AY084252 EMBL:AK228054 IPI:IPI00516307 PIR:T46185
RefSeq:NP_191308.1 UniGene:At.34827 ProteinModelPortal:Q9SCM3
SMR:Q9SCM3 STRING:Q9SCM3 PaxDb:Q9SCM3 PRIDE:Q9SCM3
EnsemblPlants:AT3G57490.1 GeneID:824916 KEGG:ath:AT3G57490
TAIR:At3g57490 InParanoid:Q9SCM3 OMA:GIKDVWT PhylomeDB:Q9SCM3
Genevestigator:Q9SCM3 GermOnline:AT3G57490 Uniprot:Q9SCM3
Length = 276
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 94/113 (83%), Positives = 106/113 (93%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
++GKI +EQIYL SLP+KE++IID +G SLKDEV+KIMPVQKQTRAGQRTRFKAF+ +
Sbjct: 56 KEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVV 115
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
GDSNGH+GLGVKCSKEVATAIRGAIILAKLSVVP+RRGYWGNKIGKPHTVPCK
Sbjct: 116 GDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCK 168
>TAIR|locus:2016585 [details] [associations]
symbol:XW6 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0009506 GO:GO:0009507 GO:GO:0006412
Gene3D:3.30.160.20 EMBL:AB077822 EMBL:AC008051 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC082643 GO:GO:0022627
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
EMBL:AB008016 EMBL:AF386958 EMBL:AY072528 EMBL:AY088743
IPI:IPI00521681 PIR:T50673 RefSeq:NP_176134.1 UniGene:At.23094
UniGene:At.23348 UniGene:At.70116 HSSP:P02357
ProteinModelPortal:Q8L8Y0 SMR:Q8L8Y0 STRING:Q8L8Y0
EnsemblPlants:AT1G58380.1 GeneID:842207 KEGG:ath:AT1G58380
TAIR:At1g58380 HOGENOM:HOG000072596 InParanoid:Q8L8Y0 KO:K02981
OMA:FSMAPFQ PhylomeDB:Q8L8Y0 ProtClustDB:CLSN2679407
Genevestigator:Q8L8Y0 GermOnline:AT1G58380 TIGRFAMs:TIGR01020
Uniprot:Q8L8Y0
Length = 284
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 95/112 (84%), Positives = 103/112 (91%)
Query: 9 DGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 68
D KI LEQIYL SLP+KE++IID +G +LKDEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65 DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124
Query: 69 DSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
D NGH+GLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 176
>TAIR|locus:504956181 [details] [associations]
symbol:AT1G58684 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 95/112 (84%), Positives = 103/112 (91%)
Query: 9 DGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 68
D KI LEQIYL SLP+KE++IID +G +LKDEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65 DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124
Query: 69 DSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
D NGH+GLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 176
>TAIR|locus:2826988 [details] [associations]
symbol:AT1G58983 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0005618 "cell wall" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 95/112 (84%), Positives = 103/112 (91%)
Query: 9 DGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 68
D KI LEQIYL SLP+KE++IID +G +LKDEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65 DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124
Query: 69 DSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
D NGH+GLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 176
>TAIR|locus:2826968 [details] [associations]
symbol:AT1G59359 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618
GO:GO:0016020 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036
GO:GO:0022627 EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348
UniGene:At.70116 HSSP:P02357 HOGENOM:HOG000072596 KO:K02981
ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:AY065030
EMBL:AY120723 EMBL:AY133659 EMBL:AK220575 EMBL:BT025727
EMBL:AB008017 IPI:IPI00528173 PIR:T52466 RefSeq:NP_564737.1
RefSeq:NP_564740.1 RefSeq:NP_683443.1 UniGene:At.72872
UniGene:At.74837 ProteinModelPortal:Q93VB8 SMR:Q93VB8 IntAct:Q93VB8
STRING:Q93VB8 EnsemblPlants:AT1G58684.1 EnsemblPlants:AT1G58983.1
EnsemblPlants:AT1G59359.1 GeneID:842222 GeneID:842229 GeneID:842237
KEGG:ath:AT1G58684 KEGG:ath:AT1G58983 KEGG:ath:AT1G59359
TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359 InParanoid:Q93VB8
OMA:NPGVEAP PhylomeDB:Q93VB8 Genevestigator:Q93VB8
GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 95/112 (84%), Positives = 103/112 (91%)
Query: 9 DGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 68
D KI LEQIYL SLP+KE++IID +G +LKDEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65 DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124
Query: 69 DSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
D NGH+GLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 176
>TAIR|locus:2054406 [details] [associations]
symbol:AT2G41840 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
Gene3D:3.30.160.20 EMBL:AC002339 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:AY048250
EMBL:AY133561 EMBL:Z17622 IPI:IPI00533598 PIR:G84846
RefSeq:NP_181715.1 UniGene:At.12251 UniGene:At.67324
ProteinModelPortal:P49688 SMR:P49688 IntAct:P49688 STRING:P49688
PaxDb:P49688 PRIDE:P49688 EnsemblPlants:AT2G41840.1 GeneID:818784
KEGG:ath:AT2G41840 TAIR:At2g41840 InParanoid:P49688 OMA:QIEQIYL
PhylomeDB:P49688 Genevestigator:P49688 GermOnline:AT2G41840
Uniprot:P49688
Length = 285
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 94/111 (84%), Positives = 103/111 (92%)
Query: 10 GKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 69
G I+ +EQIYL SLP+KE++IID IG +LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD
Sbjct: 67 GHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD 126
Query: 70 SNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
NGH+GLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK
Sbjct: 127 GNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 177
>RGD|1562399 [details] [associations]
symbol:RGD1562399 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1562399 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 IPI:IPI00358026
RefSeq:XP_001064690.1 RefSeq:XP_217412.3 Ensembl:ENSRNOT00000058491
GeneID:301438 KEGG:rno:301438 UCSC:RGD:1562399 CTD:301438
NextBio:648730 Uniprot:D3ZAS1
Length = 291
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 97/113 (85%), Positives = 106/113 (93%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLP+KE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKA+VAI
Sbjct: 71 KDMKIKSLEEIYLFSLPLKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAYVAI 130
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
GD GH+GLGVKCSKEVATAI+GAIILAKLS PVRRGYWGNKIGKPHTV CK
Sbjct: 131 GDYKGHVGLGVKCSKEVATAIQGAIILAKLS--PVRRGYWGNKIGKPHTVRCK 181
>UNIPROTKB|F1LUI9 [details] [associations]
symbol:F1LUI9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00564910 Ensembl:ENSRNOT00000014416 Uniprot:F1LUI9
Length = 287
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 100/117 (85%), Positives = 108/117 (92%)
Query: 4 CLAFRDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKA 63
CL +D KI+SLE IYLFSLPIKE EIIDF +G+SLKDEVLKIMPVQKQTRAGQ+TRFKA
Sbjct: 67 CLV-KDMKIKSLE-IYLFSLPIKESEIIDF-LGASLKDEVLKIMPVQKQTRAGQQTRFKA 123
Query: 64 FVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
FVA+GD NGH+GLG KCSKEVATAIRGAIILAKLS+VPV RGYWGNKIGKPHTVPCK
Sbjct: 124 FVAVGDYNGHVGLG-KCSKEVATAIRGAIILAKLSIVPVWRGYWGNKIGKPHTVPCK 179
>UNIPROTKB|F1LZV8 [details] [associations]
symbol:F1LZV8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00567374 Ensembl:ENSRNOT00000045325 OMA:THTRVSI
Uniprot:F1LZV8
Length = 287
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 100/117 (85%), Positives = 108/117 (92%)
Query: 4 CLAFRDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKA 63
CL +D KI+SLE IYLFSLPIKE EIIDF +G+SLKDEVLKIMPVQKQTRAGQ+TRFKA
Sbjct: 67 CLV-KDMKIKSLE-IYLFSLPIKESEIIDF-LGASLKDEVLKIMPVQKQTRAGQQTRFKA 123
Query: 64 FVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
FVA+GD NGH+GLG KCSKEVATAIRGAIILAKLS+VPV RGYWGNKIGKPHTVPCK
Sbjct: 124 FVAVGDYNGHVGLG-KCSKEVATAIRGAIILAKLSIVPVWRGYWGNKIGKPHTVPCK 179
>UNIPROTKB|J9P0D3 [details] [associations]
symbol:J9P0D3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:AAEX03026702
Ensembl:ENSCAFT00000027736 OMA:DKEWISI Uniprot:J9P0D3
Length = 265
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 102/141 (72%), Positives = 116/141 (82%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE +IIDFF+G+SLKDEVLKIMPVQKQT AGQ+TRFKAFVAI
Sbjct: 44 KDMKIKSLEEIYLFSLPIKESKIIDFFLGASLKDEVLKIMPVQKQTHAGQQTRFKAFVAI 103
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK---R--- 121
GD NGH GLG+KCSKE+ATAI GAIILAKLS+V VR GYWGNKIGKPHT PCK R
Sbjct: 104 GDYNGHGGLGIKCSKEIATAIHGAIILAKLSIVLVRGGYWGNKIGKPHT-PCKVTGRCGF 162
Query: 122 -LTHGDQQIPGGRKSKVLSSP 141
L H IP R + ++S+P
Sbjct: 163 VLVH---LIPAPRGTGIVSAP 180
>RGD|1560789 [details] [associations]
symbol:RGD1560789 "similar to ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1560789 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 OrthoDB:EOG4SXND8 EMBL:AC096051
IPI:IPI00201692 Ensembl:ENSRNOT00000028014 Uniprot:D4A577
Length = 272
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 99/138 (71%), Positives = 111/138 (80%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE IIDFF+ +SLKDE LKIM VQ QT GQRTRFKAFVA+
Sbjct: 62 KDMKIKSLEEIYLFSLPIKESVIIDFFLCASLKDEALKIMLVQTQTWTGQRTRFKAFVAV 121
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD 126
GD NGH+GLGVKCSKEV TAIRGAIILAKLS+VPVRRGY GNKI KPHTVPCK H G
Sbjct: 122 GDYNGHVGLGVKCSKEVTTAIRGAIILAKLSIVPVRRGYSGNKIDKPHTVPCKVTGHCGS 181
Query: 127 QQ---IPGGRKSKVLSSP 141
IP R + ++S+P
Sbjct: 182 VLVCLIPTPRGTGIVSAP 199
>UNIPROTKB|E9PM36 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 IPI:IPI00977151
ProteinModelPortal:E9PM36 SMR:E9PM36 Ensembl:ENST00000529806
ArrayExpress:E9PM36 Bgee:E9PM36 Uniprot:E9PM36
Length = 209
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 94/120 (78%), Positives = 104/120 (86%)
Query: 26 KEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVA 85
+E EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVA
Sbjct: 59 EESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVA 118
Query: 86 TAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD---QQIPGGRKSKVLSSP 141
TAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G + IP R + ++S+P
Sbjct: 119 TAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAP 178
>UNIPROTKB|I3L404 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 HGNC:HGNC:10404 Ensembl:ENST00000526586
Bgee:I3L404 Uniprot:I3L404
Length = 155
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 94/119 (78%), Positives = 103/119 (86%)
Query: 27 EFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVAT 86
E EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVAT
Sbjct: 1 ESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVAT 60
Query: 87 AIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD---QQIPGGRKSKVLSSP 141
AIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK G + IP R + ++S+P
Sbjct: 61 AIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAP 119
>GENEDB_PFALCIPARUM|PF14_0448 [details] [associations]
symbol:PF14_0448 "ribosomal protein S2,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR13718
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
ProtClustDB:PTZ00070 OMA:DSEGHIG RefSeq:XP_001348622.1
ProteinModelPortal:Q8IL02 SMR:Q8IL02 MINT:MINT-1571495 PRIDE:Q8IL02
EnsemblProtists:PF14_0448:mRNA GeneID:812030 KEGG:pfa:PF14_0448
EuPathDB:PlasmoDB:PF3D7_1447000 Uniprot:Q8IL02
Length = 272
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 96/148 (64%), Positives = 116/148 (78%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSS-----LKDEVLKIMPVQKQTRAGQRTRFK 62
++GKI S+E+IYL SLPIKE++IID+F + LKD+V+KIMPVQKQTRAGQRTRFK
Sbjct: 52 KEGKIVSIEEIYLHSLPIKEYQIIDYFFQPNECSHPLKDDVVKIMPVQKQTRAGQRTRFK 111
Query: 63 AFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRL 122
AFVAIGD NGH GLGVKC+KEVATAIRGAII AKLS++PVRRGYWGNKIG PHTVP K
Sbjct: 112 AFVAIGDGNGHCGLGVKCAKEVATAIRGAIISAKLSLIPVRRGYWGNKIGDPHTVPMKVS 171
Query: 123 TH-GDQQI---PGGRKSKVLSSPENLKV 146
G +I P R ++++ +P K+
Sbjct: 172 GKCGSVRIRLVPAPRGTQIVGAPTTKKM 199
>UNIPROTKB|Q8IL02 [details] [associations]
symbol:PF14_0448 "40S ribosomal protein S2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 PANTHER:PTHR13718
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
ProtClustDB:PTZ00070 OMA:DSEGHIG RefSeq:XP_001348622.1
ProteinModelPortal:Q8IL02 SMR:Q8IL02 MINT:MINT-1571495 PRIDE:Q8IL02
EnsemblProtists:PF14_0448:mRNA GeneID:812030 KEGG:pfa:PF14_0448
EuPathDB:PlasmoDB:PF3D7_1447000 Uniprot:Q8IL02
Length = 272
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 96/148 (64%), Positives = 116/148 (78%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSS-----LKDEVLKIMPVQKQTRAGQRTRFK 62
++GKI S+E+IYL SLPIKE++IID+F + LKD+V+KIMPVQKQTRAGQRTRFK
Sbjct: 52 KEGKIVSIEEIYLHSLPIKEYQIIDYFFQPNECSHPLKDDVVKIMPVQKQTRAGQRTRFK 111
Query: 63 AFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRL 122
AFVAIGD NGH GLGVKC+KEVATAIRGAII AKLS++PVRRGYWGNKIG PHTVP K
Sbjct: 112 AFVAIGDGNGHCGLGVKCAKEVATAIRGAIISAKLSLIPVRRGYWGNKIGDPHTVPMKVS 171
Query: 123 TH-GDQQI---PGGRKSKVLSSPENLKV 146
G +I P R ++++ +P K+
Sbjct: 172 GKCGSVRIRLVPAPRGTQIVGAPTTKKM 199
>WB|WBGene00004471 [details] [associations]
symbol:rps-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0000003
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 OMA:FSMAPFQ TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 EMBL:FO080908 PIR:T34184
RefSeq:NP_501322.1 ProteinModelPortal:P51403 SMR:P51403
DIP:DIP-25206N IntAct:P51403 MINT:MINT-228946 STRING:P51403
PaxDb:P51403 PRIDE:P51403 EnsemblMetazoa:C49H3.11.1
EnsemblMetazoa:C49H3.11.2 EnsemblMetazoa:C49H3.11.3 GeneID:177583
KEGG:cel:CELE_C49H3.11 UCSC:C49H3.11.1 CTD:177583 WormBase:C49H3.11
InParanoid:P51403 NextBio:897468 Uniprot:P51403
Length = 272
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 92/113 (81%), Positives = 100/113 (88%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
++ KI +LE+IYL SLPIKEFEIID S+LKDEVLKI PVQKQT AGQRTRFKAFVAI
Sbjct: 68 KEKKITTLEEIYLNSLPIKEFEIIDALC-SNLKDEVLKISPVQKQTTAGQRTRFKAFVAI 126
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
GD GH+GLGVKCSKEVATAIRGAI+ AKL+VVPVRRGYWGNKIG PHTVPCK
Sbjct: 127 GDHAGHVGLGVKCSKEVATAIRGAIVAAKLAVVPVRRGYWGNKIGLPHTVPCK 179
>DICTYBASE|DDB_G0293742 [details] [associations]
symbol:rps2 "ribosomal protein S2" species:44689
"Dictyostelium discoideum" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
dictyBase:DDB_G0293742 GenomeReviews:CM000155_GR GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AAFI02000219 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
EMBL:X56297 PIR:S22297 RefSeq:XP_628967.1 ProteinModelPortal:P27685
STRING:P27685 PRIDE:P27685 EnsemblProtists:DDB0215391
GeneID:8629395 KEGG:ddi:DDB_G0293742 OMA:GLVENIH
ProtClustDB:PTZ00070 Uniprot:P27685
Length = 265
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 83/111 (74%), Positives = 100/111 (90%)
Query: 10 GKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 69
G ++++ +IYLFSLPIKE++IID F+ +LKDEV+KI+PVQKQTRAGQRTRFKAFV +GD
Sbjct: 62 GLVENIHEIYLFSLPIKEYQIIDKFL--NLKDEVMKIVPVQKQTRAGQRTRFKAFVVVGD 119
Query: 70 SNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
NGH+GLGVKC+KEVATAI GAI+ AKLSV+PVRRGYWGNK+G PHTVP K
Sbjct: 120 HNGHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYWGNKLGAPHTVPTK 170
>POMBASE|SPCC576.08c [details] [associations]
symbol:rps2 "40S ribosomal protein S2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 PomBase:SPCC576.08c EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0032040 GO:GO:0022627
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020 OMA:NPGVEAP
PIR:T41418 RefSeq:NP_588435.1 ProteinModelPortal:O74892 SMR:O74892
IntAct:O74892 STRING:O74892 PRIDE:O74892 EnsemblFungi:SPCC576.08c.1
GeneID:2539067 KEGG:spo:SPCC576.08c OrthoDB:EOG4T1MWN
NextBio:20800240 Uniprot:O74892
Length = 253
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 80/111 (72%), Positives = 101/111 (90%)
Query: 10 GKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 69
GKI+S+E+IYL+SLPIKE++I+D+F+ L DEV+K++PVQKQTRAGQRTRFKAFV IGD
Sbjct: 47 GKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGD 105
Query: 70 SNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
S+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PHTVP K
Sbjct: 106 SDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVK 156
>ASPGD|ASPL0000036430 [details] [associations]
symbol:AN3413 species:162425 "Emericella nidulans"
[GO:0006407 "rRNA export from nucleus" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
[GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
EMBL:BN001306 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000055 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
TIGRFAMs:TIGR01020 OMA:DSEGHIG OrthoDB:EOG4T1MWN RefSeq:XP_661017.1
ProteinModelPortal:Q5B7R7 SMR:Q5B7R7 STRING:Q5B7R7
EnsemblFungi:CADANIAT00009625 GeneID:2874304 KEGG:ani:AN3413.2
Uniprot:Q5B7R7
Length = 259
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 88/136 (64%), Positives = 109/136 (80%)
Query: 10 GKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 69
GKI S+EQIYL SLP+KE++I+DFF+ LKDEV+KI PVQKQTRAGQRTRFKA V IGD
Sbjct: 54 GKITSMEQIYLHSLPVKEYQIVDFFL-PKLKDEVMKIKPVQKQTRAGQRTRFKAVVVIGD 112
Query: 70 SNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD-- 126
S GHIGLG+K SKEVATAIR AII+AKL+V+PVRRGYWG +G+PH++P K+ G
Sbjct: 113 SEGHIGLGIKTSKEVATAIRAAIIIAKLAVLPVRRGYWGTNLGEPHSLPVKQSAKCGSVS 172
Query: 127 -QQIPGGRKSKVLSSP 141
+ IP R + +++SP
Sbjct: 173 VRLIPAPRGTGLVASP 188
>UNIPROTKB|G4MPT3 [details] [associations]
symbol:MGG_16248 "30S ribosomal protein S5" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 EMBL:CM001231 GO:GO:0043581
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 RefSeq:XP_003709842.1
ProteinModelPortal:G4MPT3 SMR:G4MPT3 EnsemblFungi:MGG_16248T0
GeneID:12985269 KEGG:mgr:MGG_16248 Uniprot:G4MPT3
Length = 265
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 88/136 (64%), Positives = 108/136 (79%)
Query: 10 GKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 69
GKI+S+E+IYL SLPIKE++I+DFF+ LKDEV+KI PVQKQTRAGQRTRFKA V IGD
Sbjct: 60 GKIKSMEEIYLHSLPIKEYQIVDFFL-PKLKDEVMKIKPVQKQTRAGQRTRFKAIVIIGD 118
Query: 70 SNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD-- 126
S GH+GLG+K SKEVATAIR AII+AKLSV+PVRRGYWG +G PH++P K G
Sbjct: 119 SEGHVGLGIKTSKEVATAIRAAIIIAKLSVIPVRRGYWGTNLGTPHSLPVKESGKCGSVT 178
Query: 127 -QQIPGGRKSKVLSSP 141
+ IP R + +++SP
Sbjct: 179 VRLIPAPRGTALVASP 194
>UNIPROTKB|F1LVB4 [details] [associations]
symbol:F1LVB4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
GeneTree:ENSGT00390000001433 IPI:IPI00569467 PRIDE:F1LVB4
Ensembl:ENSRNOT00000035389 Uniprot:F1LVB4
Length = 271
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 95/138 (68%), Positives = 109/138 (78%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLF LPIKE EIIDFF+G+SL DEVLKI+ KQT AGQRT K+FVAI
Sbjct: 53 KDMKIKSLEEIYLFYLPIKESEIIDFFLGASLNDEVLKIIQC-KQTWAGQRT--KSFVAI 109
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTHGDQ 127
GD NGH+GLGVKC KEVATAIRGAIILA LSV+PV+RGY GNKIGKPHTVPCK D
Sbjct: 110 GDYNGHVGLGVKCFKEVATAIRGAIILATLSVIPVQRGYLGNKIGKPHTVPCKVTGCCDS 169
Query: 128 Q----IPGGRKSKVLSSP 141
IP R + ++S+P
Sbjct: 170 VLVCLIPTPRGTGIVSAP 187
>UNIPROTKB|F1M5X9 [details] [associations]
symbol:F1M5X9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718 TIGRFAMs:TIGR01020
IPI:IPI00188066 PRIDE:F1M5X9 Ensembl:ENSRNOT00000007876
Uniprot:F1M5X9
Length = 250
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 95/143 (66%), Positives = 111/143 (77%)
Query: 4 CLAFRDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFK- 62
CL +D K++SLE+I+LFSL IKE EI FF+G+SLKDEVLKIMPVQKQTRAGQ+TRFK
Sbjct: 49 CLV-KDMKVKSLEEIFLFSLSIKESEITYFFLGASLKDEVLKIMPVQKQTRAGQQTRFKP 107
Query: 63 AFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRL 122
FVAIGD NGH+GLGVKCSKEVAT I G IILAKLS+VPVR+GYWGNK PH VPCK
Sbjct: 108 GFVAIGDYNGHVGLGVKCSKEVAT-ILGVIILAKLSIVPVRKGYWGNK---PH-VPCKVT 162
Query: 123 THGDQQ----IPGGRKSKVLSSP 141
+ IP R + ++S+P
Sbjct: 163 GRCASELVCLIPAPRGTGIVSAP 185
>CGD|CAL0004119 [details] [associations]
symbol:RPS21 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0070181 "SSU rRNA
binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006407 "rRNA export from nucleus"
evidence=IEA] [GO:0045903 "positive regulation of translational
fidelity" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 CGD:CAL0004119 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 EMBL:AACQ01000045
EMBL:AACQ01000042 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
HOGENOM:HOG000072596 KO:K02981 TIGRFAMs:TIGR01020
RefSeq:XP_718157.1 RefSeq:XP_718427.1 STRING:Q5A900 GeneID:3639967
GeneID:3640242 KEGG:cal:CaO19.10845 KEGG:cal:CaO19.3334
Uniprot:Q5A900
Length = 249
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 80/136 (58%), Positives = 106/136 (77%)
Query: 10 GKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 69
GKI S+EQIYL SLP+KE++IID + LKD+V+KI VQKQTRAGQRTR KA V IGD
Sbjct: 43 GKITSVEQIYLHSLPVKEYQIIDLLL-PDLKDDVMKIRSVQKQTRAGQRTRMKAVVVIGD 101
Query: 70 SNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD-- 126
SNGH+GLG+K +KEVA+AI+ AI++AKLS++P+RRGYWG+ +G+PH++PCK G
Sbjct: 102 SNGHVGLGIKTAKEVASAIKAAIVIAKLSIIPIRRGYWGSNLGQPHSLPCKVTGKCGSVA 161
Query: 127 -QQIPGGRKSKVLSSP 141
+ IP R +++SP
Sbjct: 162 VRLIPAPRGKGIVASP 177
>UNIPROTKB|E2QWF1 [details] [associations]
symbol:E2QWF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR014721 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
EMBL:AAEX03013493 Ensembl:ENSCAFT00000008126 OMA:TERACIP
Uniprot:E2QWF1
Length = 179
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 87/117 (74%), Positives = 98/117 (83%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE IYLFSLPIKE EI DF +G+SLKDEVLKIMPV+K TRAG +TRF+AFVA+
Sbjct: 59 KDMKIKSLE-IYLFSLPIKESEITDF-LGASLKDEVLKIMPVEKHTRAGPQTRFRAFVAM 116
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH 124
GD N H+GLG+K SKEVATAIRG IILAKLSV R+GYWGNKI KPHTV CK H
Sbjct: 117 GDYNRHVGLGIKGSKEVATAIRG-IILAKLSV---RQGYWGNKILKPHTVLCKVTGH 169
>SGD|S000003091 [details] [associations]
symbol:RPS2 "Protein component of the small (40S) subunit"
species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IMP]
[GO:0070181 "SSU rRNA binding" evidence=IDA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0006407 "rRNA export
from nucleus" evidence=IMP] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 SGD:S000003091 InterPro:IPR014720 GO:GO:0005730
EMBL:BK006941 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0032040 GO:GO:0070181
GO:GO:0045903 PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G EMBL:X94106 GO:GO:0006407 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 PDB:1K5X
PDBsum:1K5X HOGENOM:HOG000072596 KO:K02981 OMA:FSMAPFQ
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 OrthoDB:EOG4T1MWN
EMBL:M59375 EMBL:Z72645 EMBL:AY557815 PIR:A36363 RefSeq:NP_011392.1
ProteinModelPortal:P25443 SMR:P25443 IntAct:P25443 STRING:P25443
PaxDb:P25443 PeptideAtlas:P25443 EnsemblFungi:YGL123W GeneID:852754
KEGG:sce:YGL123W EvolutionaryTrace:P25443 NextBio:972192
Genevestigator:P25443 GermOnline:YGL123W Uniprot:P25443
Length = 254
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 79/136 (58%), Positives = 103/136 (75%)
Query: 10 GKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 69
GKI ++E+I+L SLP+KEF+IID + L+DEV+ I PVQKQTRAGQRTRFKA V +GD
Sbjct: 48 GKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGD 106
Query: 70 SNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLTH-GD-- 126
SNGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G+PH++ K G
Sbjct: 107 SNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVT 166
Query: 127 -QQIPGGRKSKVLSSP 141
+ IP R S +++SP
Sbjct: 167 VRLIPAPRGSGIVASP 182
>UNIPROTKB|J9PAX1 [details] [associations]
symbol:J9PAX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:AAEX03012471
Ensembl:ENSCAFT00000029347 Uniprot:J9PAX1
Length = 218
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 89/152 (58%), Positives = 105/152 (69%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
RD KI+SLE+IYL SLP E EIIDFF+G+SLKDEVLKI PVQ Q RAG RTRFKA VAI
Sbjct: 16 RDMKIKSLEKIYLLSLPNGESEIIDFFLGASLKDEVLKIRPVQNQPRAGLRTRFKALVAI 75
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK-RLTHGD 126
NG +GLGVKCSKEVATA GAIILAKLS+VPV WG++IGK V CK G
Sbjct: 76 KHYNGRVGLGVKCSKEVATATHGAIILAKLSIVPV----WGDEIGKSQAVRCKVTCLCGS 131
Query: 127 ---QQIPGGRKSKVLSSP---ENLKVTSTSKC 152
+ IP + + ++S+P + L + T C
Sbjct: 132 VLVRLIPAPKGTGIVSAPVPKKLLMMAGTDHC 163
>UNIPROTKB|I3LJ87 [details] [associations]
symbol:RPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005654 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433
Ensembl:ENSSSCT00000024892 OMA:DSKEWAP Uniprot:I3LJ87
Length = 184
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 77/99 (77%), Positives = 84/99 (84%)
Query: 47 MPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGY 106
MPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGY
Sbjct: 1 MPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGY 60
Query: 107 WGNKIGKPHTVPCKRLTH-GD---QQIPGGRKSKVLSSP 141
WGNKIGKPHTVPCK G + IP R + ++S+P
Sbjct: 61 WGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAP 99
>UNIPROTKB|J9P3M6 [details] [associations]
symbol:J9P3M6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR014721 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
EMBL:AAEX03010296 Ensembl:ENSCAFT00000008016 Uniprot:J9P3M6
Length = 269
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 72/116 (62%), Positives = 90/116 (77%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
RD K +SLE++ LFSLPI+E E++D F+G+SLK EVLK + V+KQ AGQRTRFKAF A+
Sbjct: 58 RDMKTKSLEELQLFSLPIRESEVLDSFLGTSLKGEVLKTLLVKKQPCAGQRTRFKAFTAV 117
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLT 123
D+NGH+GLGV+CSKEVA AI G +ILA L + RGYWGNK KPHT+ C+ T
Sbjct: 118 RDNNGHVGLGVQCSKEVAAAICG-VILATLCTI-AWRGYWGNKTSKPHTILCQVTT 171
>UNIPROTKB|F1S275 [details] [associations]
symbol:F1S275 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 PANTHER:PTHR13718
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 EMBL:CU407229
Ensembl:ENSSSCT00000006592 Uniprot:F1S275
Length = 270
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 72/102 (70%), Positives = 78/102 (76%)
Query: 20 LFSLPIKEFEIIDFFIGSSLKD-EVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGV 78
LFSLPIKE IIDFF G + +VLKIMPVQKQT AG +TRFKAFV I D NGH+GLGV
Sbjct: 63 LFSLPIKESAIIDFFGGRGGRPLKVLKIMPVQKQTCAGHQTRFKAFVPIRDYNGHVGLGV 122
Query: 79 KCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
KCSKEVATAIRGAI P+ R YWGNKIGKP T+PCK
Sbjct: 123 KCSKEVATAIRGAIFWPNS---PLSRAYWGNKIGKPRTLPCK 161
>UNIPROTKB|F1LUJ6 [details] [associations]
symbol:F1LUJ6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
GeneTree:ENSGT00390000001433 IPI:IPI00949941
Ensembl:ENSRNOT00000003897 Uniprot:F1LUJ6
Length = 218
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 77/142 (54%), Positives = 92/142 (64%)
Query: 4 CLAFRDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKA 63
C +D KI+SLE++YLFSL E EIIDFF G SLK++ + V T QRTRFKA
Sbjct: 18 CHLVKDKKIKSLEEMYLFSLSNNESEIIDFFQGVSLKED--HVNEVADLT--AQRTRFKA 73
Query: 64 FVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKRLT 123
FVAIGD N H+GL VKC KEVATA+ GA ILAKLS+VP G++IGKPH VPCK
Sbjct: 74 FVAIGDYNSHVGLSVKCPKEVATAMGGATILAKLSIVPCGEAT-GDEIGKPHAVPCKVTG 132
Query: 124 HGDQQ----IPGGRKSKVLSSP 141
IP R + ++SSP
Sbjct: 133 RCSSVLVHLIPAPRGTGIVSSP 154
>UNIPROTKB|H0YEN5 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 EMBL:AC005363
PANTHER:PTHR13718 TIGRFAMs:TIGR01020 HGNC:HGNC:10404 PRIDE:H0YEN5
Ensembl:ENST00000533186 Bgee:H0YEN5 Uniprot:H0YEN5
Length = 195
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 62/84 (73%), Positives = 69/84 (82%)
Query: 62 KAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKR 121
KAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS+VPVRRGYWGNKIGKPHTVPCK
Sbjct: 27 KAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKV 86
Query: 122 LTH-GD---QQIPGGRKSKVLSSP 141
G + IP R + ++S+P
Sbjct: 87 TGRCGSVLVRLIPAPRGTGIVSAP 110
>UNIPROTKB|E9PTW0 [details] [associations]
symbol:E9PTW0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR13718
GeneTree:ENSGT00390000001433 IPI:IPI00764530
Ensembl:ENSRNOT00000044776 Uniprot:E9PTW0
Length = 122
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/69 (86%), Positives = 66/69 (95%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFKAFVAI
Sbjct: 47 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 106
Query: 68 GDSNGHIGL 76
GD NGH+GL
Sbjct: 107 GDYNGHLGL 115
>UNIPROTKB|E9PQD7 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
Pfam:PF03719 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC005363
PANTHER:PTHR13718 HGNC:HGNC:10404 IPI:IPI00979595
ProteinModelPortal:E9PQD7 SMR:E9PQD7 PRIDE:E9PQD7
Ensembl:ENST00000526522 ArrayExpress:E9PQD7 Bgee:E9PQD7
Uniprot:E9PQD7
Length = 235
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 48/55 (87%), Positives = 53/55 (96%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFK 62
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKDEVLKIMPVQKQTRAGQRTRFK
Sbjct: 71 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UNIPROTKB|F1M474 [details] [associations]
symbol:F1M474 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00565365 Ensembl:ENSRNOT00000044113 Uniprot:F1M474
Length = 222
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 50/77 (64%), Positives = 58/77 (75%)
Query: 19 YLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGV 78
YLFSL KE EIIDFF+G+SLKDE LKIMPV +Q G +TR KA V+ GD NGH+GLGV
Sbjct: 43 YLFSLS-KESEIIDFFLGASLKDEGLKIMPVWEQIWTGHQTRVKALVSTGDYNGHVGLGV 101
Query: 79 KCSKEVATAIRGAIILA 95
K SKE+ I+GAI A
Sbjct: 102 KYSKELVIVIQGAITAA 118
>UNIPROTKB|F1PW41 [details] [associations]
symbol:F1PW41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000851 InterPro:IPR013810 Pfam:PF00333
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 EMBL:AAEX03002492
Ensembl:ENSCAFT00000024499 Uniprot:F1PW41
Length = 193
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 53/114 (46%), Positives = 72/114 (63%)
Query: 32 DFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGA 91
D + +++K + ++I +K+T AGQ+TRFKAFV D NGH+ L V S+EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLNV--SREVATAIRGA 58
Query: 92 IILAKLSVVPVRRGYWGNKIGKPHTVPCK--RLTHGD--QQIPGGRKSKVLSSP 141
IIL + S+ G+ GNKI KPHTV C+ RL I R + +LS+P
Sbjct: 59 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAP 112
>RGD|1586357 [details] [associations]
symbol:LOC689943 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 Pfam:PF03719 RGD:1586357
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 IPI:IPI00567447
Ensembl:ENSRNOT00000050867 OMA:MARIEDC Uniprot:F1LVD1
Length = 192
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 1 MVQCLAFRDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTR 60
M+ CL +D KI+SLE+ YLFSL IKE EIIDFF+G+SL+DEVL I P QKQTRAGQRTR
Sbjct: 24 MMGCLV-KDMKIKSLEETYLFSLSIKESEIIDFFLGASLQDEVLTIRP-QKQTRAGQRTR 81
Query: 61 FK 62
K
Sbjct: 82 GK 83
>RGD|1589430 [details] [associations]
symbol:LOC680646 "similar to 40S ribosomal protein S2"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 RGD:1589430 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR13718 GeneTree:ENSGT00390000001433 IPI:IPI00557169
Ensembl:ENSRNOT00000036337 Uniprot:F1M0D1
Length = 210
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 67
+D K + LE Y+FSL +K+++IIDF L + P QKQT+ GQ+ R K F
Sbjct: 10 KDTKNKFLET-YMFSLLMKKYKIIDF----------LCVYPCQKQTQTGQKNRLKTFCCY 58
Query: 68 GDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRR 104
GD NGH+GLG+KCSKEVATA +G + +L + R
Sbjct: 59 GDYNGHVGLGIKCSKEVATAFQGLWVKMQLGETRLSR 95
>UNIPROTKB|F1M7B2 [details] [associations]
symbol:F1M7B2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR014721 PANTHER:PTHR13718 IPI:IPI00781455
Ensembl:ENSRNOT00000060566 Uniprot:F1M7B2
Length = 173
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 50/109 (45%), Positives = 61/109 (55%)
Query: 11 KIQSLEQIYLFSLPIKEFEIIDFFIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDS 70
KI+SLE FS +II+FF+G LKDEVL+ M Q Q RTR K F +
Sbjct: 37 KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQNQ-----RTRIKVFFFLTIR 87
Query: 71 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 119
+ L V CSKEV TA + AI L + + GY GNKIG PHT+PC
Sbjct: 88 SPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNKIGNPHTIPC 134
>UNIPROTKB|F1LUE4 [details] [associations]
symbol:F1LUE4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 InterPro:IPR014720 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR13718 GeneTree:ENSGT00390000001433
IPI:IPI00188513 Ensembl:ENSRNOT00000015702 Uniprot:F1LUE4
Length = 158
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 58 RTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTV 117
+TRFKAF+AI D NGHIGLG+KC + ++VP +RG WGNKIGKP TV
Sbjct: 1 QTRFKAFIAIRDYNGHIGLGIKCYCNLR------------AIVPGQRGSWGNKIGKPRTV 48
Query: 118 PCK 120
PCK
Sbjct: 49 PCK 51
>UNIPROTKB|F1LUA6 [details] [associations]
symbol:F1LUA6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 Pfam:PF03719 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR13718
IPI:IPI00561961 Ensembl:ENSRNOT00000051118 OMA:NIAKATY
Uniprot:F1LUA6
Length = 127
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 33/49 (67%), Positives = 37/49 (75%)
Query: 72 GHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 120
GH+GL VKCSK+V TA+ LAKLS +PV RGYW NK GKPHTV CK
Sbjct: 3 GHVGLSVKCSKKVVTAVH----LAKLSTIPVWRGYW-NKTGKPHTVSCK 46
>UNIPROTKB|H3BNG3 [details] [associations]
symbol:RPS2 "40S ribosomal protein S2" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000851 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AC005363 PANTHER:PTHR13718
HGNC:HGNC:10404 Ensembl:ENST00000563194 Bgee:H3BNG3 Uniprot:H3BNG3
Length = 44
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 8 RDGKIQSLEQIYLFSLPIKEFEIIDFFIGSSLKD 41
+D KI+SLE+IYLFSLPIKE EIIDFF+G+SLKD
Sbjct: 11 KDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKD 44
>TIGR_CMR|BA_0127 [details] [associations]
symbol:BA_0127 "ribosomal protein S5" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:NP_842695.1
RefSeq:YP_016732.1 RefSeq:YP_026413.1 ProteinModelPortal:Q81VR3
SMR:Q81VR3 DNASU:1083790 EnsemblBacteria:EBBACT00000013084
EnsemblBacteria:EBBACT00000016262 EnsemblBacteria:EBBACT00000019813
GeneID:1083790 GeneID:2814389 GeneID:2850890 KEGG:ban:BA_0127
KEGG:bar:GBAA_0127 KEGG:bat:BAS0127
BioCyc:BANT260799:GJAJ-138-MONOMER
BioCyc:BANT261594:GJ7F-140-MONOMER Uniprot:Q81VR3
Length = 166
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 39 LKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLS 98
L++ V+ I V K + G+R RF A V +GD NGH+G G ++EV AIR AI AK +
Sbjct: 11 LEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKN 70
Query: 99 VVPVRRGYWGNKIGKPHTV 117
++ V G I PHT+
Sbjct: 71 LIAVP--LVGTTI--PHTI 85
>TIGR_CMR|GSU_2840 [details] [associations]
symbol:GSU_2840 "ribosomal protein S5" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B OMA:YNASKIL RefSeq:NP_953883.1
ProteinModelPortal:Q749A4 SMR:Q749A4 GeneID:2686827
KEGG:gsu:GSU2840 PATRIC:22028527
BioCyc:GSUL243231:GH27-2799-MONOMER Uniprot:Q749A4
Length = 162
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 38 SLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKL 97
+L D+V+ I V K + G+R F A V +GD NG +G G+ + EV AIR + AK
Sbjct: 10 NLTDKVVHISRVAKVVKGGRRFSFSALVVVGDGNGCVGYGLGKANEVPEAIRKGVEQAKK 69
Query: 98 SVVPVRRGYWGNKIGKPHTVPCKRLTH 124
+++ V I + HT+P + L H
Sbjct: 70 NLIKV-------PIVEGHTIPYEVLGH 89
>TIGR_CMR|CHY_2292 [details] [associations]
symbol:CHY_2292 "ribosomal protein S5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:YP_361101.1
ProteinModelPortal:Q3A9T3 SMR:Q3A9T3 STRING:Q3A9T3 GeneID:3727429
KEGG:chy:CHY_2292 PATRIC:21277655
BioCyc:CHYD246194:GJCN-2291-MONOMER Uniprot:Q3A9T3
Length = 167
Score = 110 (43.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 39 LKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLS 98
L ++V+ I K + G+R F A V +GD GH+G+G+ + EV AIR I AK +
Sbjct: 11 LSEKVIAINRTAKVVKGGRRFSFSALVVVGDQKGHVGVGLGKAPEVPDAIRKGIEDAKKN 70
Query: 99 VVPV 102
++ V
Sbjct: 71 LIKV 74
>TAIR|locus:2057645 [details] [associations]
symbol:EMB3113 "EMBRYO DEFECTIVE 3113" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009409
"response to cold" evidence=IEP;RCA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0016020 "membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005634 GO:GO:0046686
GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0009409 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0009535
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U78721 KO:K02988
GO:GO:0015935 EMBL:AY093289 EMBL:AY054523 EMBL:AY087734
IPI:IPI00526383 PIR:G84749 RefSeq:NP_180936.1 UniGene:At.24873
HSSP:Q5SHQ5 ProteinModelPortal:P93014 SMR:P93014 STRING:P93014
World-2DPAGE:0003:P93014 PaxDb:P93014 PRIDE:P93014 ProMEX:P93014
EnsemblPlants:AT2G33800.1 GeneID:817947 KEGG:ath:AT2G33800
GeneFarm:35 TAIR:At2g33800 eggNOG:COG0098 HOGENOM:HOG000072595
InParanoid:P93014 OMA:NARATIK PhylomeDB:P93014
ProtClustDB:CLSN2683512 Genevestigator:P93014 GermOnline:AT2G33800
InterPro:IPR018192 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 Uniprot:P93014
Length = 303
Score = 113 (44.8 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 21/68 (30%), Positives = 42/68 (61%)
Query: 35 IGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIIL 94
I ++ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I
Sbjct: 143 IRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAID 202
Query: 95 AKLSVVPV 102
A+ ++V V
Sbjct: 203 ARRNIVQV 210
>TIGR_CMR|DET_0491 [details] [associations]
symbol:DET_0491 "ribosomal protein S5" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
RefSeq:YP_181235.1 ProteinModelPortal:Q3Z964 STRING:Q3Z964
GeneID:3230239 KEGG:det:DET0491 PATRIC:21608051
BioCyc:DETH243164:GJNF-491-MONOMER Uniprot:Q3Z964
Length = 172
Score = 103 (41.3 bits), Expect = 0.00010, P = 0.00010
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 39 LKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAK 96
L D+++ I V K + G+R F A V GD H+G+GV +KEV +AI A AK
Sbjct: 15 LNDKLIFINRVTKVVKGGKRMGFAALVVTGDGKNHVGIGVGKAKEVPSAISKASANAK 72
>TIGR_CMR|SPO_0502 [details] [associations]
symbol:SPO_0502 "ribosomal protein S5" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_165764.1 ProteinModelPortal:Q5LW41
SMR:Q5LW41 GeneID:3195459 KEGG:sil:SPO0502 PATRIC:23374265
Uniprot:Q5LW41
Length = 190
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 41 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVV 100
D ++ I V K + G+R F A V +GD G +G G +KEV AIR A AK ++
Sbjct: 23 DRLVAINRVSKTVKGGKRFGFAALVVVGDQKGRVGFGKGKAKEVPEAIRKATEQAKRQMI 82
Query: 101 PVR 103
V+
Sbjct: 83 RVQ 85
>UNIPROTKB|Q9KP01 [details] [associations]
symbol:rpsE "30S ribosomal protein S5" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 100 (40.3 bits), Expect = 0.00028, P = 0.00028
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 37 SSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAK 96
+ L+++++ + V K + G+ F A +GD NG +G G ++EV AI+ A+ A+
Sbjct: 10 NDLQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKAR 69
Query: 97 LSVVPV 102
S+V +
Sbjct: 70 RSMVTI 75
>TIGR_CMR|VC_2579 [details] [associations]
symbol:VC_2579 "ribosomal protein S5" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 100 (40.3 bits), Expect = 0.00028, P = 0.00028
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 37 SSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAK 96
+ L+++++ + V K + G+ F A +GD NG +G G ++EV AI+ A+ A+
Sbjct: 10 NDLQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKAR 69
Query: 97 LSVVPV 102
S+V +
Sbjct: 70 RSMVTI 75
>TIGR_CMR|CJE_1858 [details] [associations]
symbol:CJE_1858 "ribosomal protein S5" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006450 "regulation of translational fidelity" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_179828.1 ProteinModelPortal:Q5HSA7
SMR:Q5HSA7 STRING:Q5HSA7 GeneID:3232485 KEGG:cjr:CJE1858
PATRIC:20045548 OMA:YNASKIL BioCyc:CJEJ195099:GJC0-1897-MONOMER
Uniprot:Q5HSA7
Length = 147
Score = 96 (38.9 bits), Expect = 0.00050, P = 0.00050
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 40 KDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSV 99
++ ++ I V K + G+R RF A V +G+ G +G+G +KEV AIR A+ A ++
Sbjct: 10 EEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLVGVGYGKAKEVPDAIRKAVDDAFKNI 69
Query: 100 VPVR 103
V V+
Sbjct: 70 VEVK 73
>UNIPROTKB|P0A7W1 [details] [associations]
symbol:rpsE "30S ribosomal subunit protein S5"
species:83333 "Escherichia coli K-12" [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0046677 "response to
antibiotic" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:X01563 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0046677 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 PDB:3J00 PDBsum:3J00 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PDB:3FIH
PDB:3IZV PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW KO:K02988
GO:GO:0015935 PDB:3SFS PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:1EG0
PDBsum:1EG0 eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 PDB:4GAS
PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87
PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P
PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF
PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO
PDB:2VHP PDB:2WWL PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2Z4K PDBsum:2Z4M PDBsum:3DF1
PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O
PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21 PDBsum:3J0U
PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10 PDBsum:3J13
PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR PDBsum:3OFA
PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX PDBsum:3OFY
PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV PDBsum:4GAQ
PDBsum:4GD2 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
PIR:B65123 RefSeq:NP_417762.1 RefSeq:YP_492129.1
ProteinModelPortal:P0A7W1 SMR:P0A7W1 IntAct:P0A7W1 PaxDb:P0A7W1
PRIDE:P0A7W1 EnsemblBacteria:EBESCT00000004415
EnsemblBacteria:EBESCT00000014509 GeneID:12934414 GeneID:947795
KEGG:ecj:Y75_p3873 KEGG:eco:b3303 PATRIC:32122038 EchoBASE:EB0897
EcoGene:EG10904 BioCyc:EcoCyc:EG10904-MONOMER
BioCyc:ECOL316407:JW3265-MONOMER EvolutionaryTrace:P0A7W1
Genevestigator:P0A7W1 Uniprot:P0A7W1
Length = 167
Score = 97 (39.2 bits), Expect = 0.00081, P = 0.00081
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 39 LKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLS 98
L+++++ + V K + G+ F A +GD NG +G G ++EV AI+ A+ A+ +
Sbjct: 11 LQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRN 70
Query: 99 VVPV--RRGYWGNKIGKPHT---VPCKRLTHGDQQIPGGRKSKVL 138
++ V G + + HT V + + G I GG VL
Sbjct: 71 MINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVL 115
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 152 152 0.00073 105 3 11 22 0.46 31
30 0.40 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 67
No. of states in DFA: 577 (61 KB)
Total size of DFA: 129 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 13.90u 0.08s 13.98t Elapsed: 00:00:11
Total cpu time: 13.91u 0.08s 13.99t Elapsed: 00:00:14
Start: Thu Aug 15 13:01:36 2013 End: Thu Aug 15 13:01:50 2013