Query         psy4337
Match_columns 174
No_of_seqs    129 out of 232
Neff          5.4 
Searched_HMMs 29240
Date          Fri Aug 16 23:01:36 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy4337.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4337hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2gyq_A YCFI, putative structur  74.3     8.9 0.00031   29.9   6.7   77   43-121    16-97  (173)
  2 2gs4_A Protein YCIF; stress pr  72.3     4.6 0.00016   31.4   4.5   77   43-121     9-91  (166)
  3 3nr7_A DNA-binding protein H-N  68.6     9.5 0.00033   26.8   5.1   39   71-109    41-79  (86)
  4 1wmi_B RELB, hypothetical prot  59.2     7.3 0.00025   26.0   2.8   38   76-113     8-46  (67)
  5 1vp7_A Exodeoxyribonuclease VI  39.9      24 0.00082   25.5   3.2   22   88-109    36-57  (100)
  6 1gmj_A ATPase inhibitor; coile  35.8      45  0.0016   23.4   4.0   20   73-92     59-78  (84)
  7 3t98_B Nucleoporin NUP58/NUP45  35.0   1E+02  0.0035   21.6   5.9   39   72-110    12-51  (93)
  8 3hiu_A Uncharacterized protein  32.1      62  0.0021   25.0   4.7   29   73-101    38-66  (166)
  9 3ogh_B Protein YCIE; iron-bind  30.4      68  0.0023   24.9   4.7   28   73-100    41-68  (171)
 10 2q12_A DIP13 alpha, DCC-intera  28.6 1.1E+02  0.0036   24.3   5.8   61   36-97    114-185 (265)
 11 4etr_A Putative uncharacterize  25.6 1.1E+02  0.0036   22.6   4.9   61   39-99      7-68  (153)
 12 3fse_A Two-domain protein cont  24.7      64  0.0022   27.8   3.9   27   73-99    241-267 (365)
 13 2q13_A DCC-interacting protein  23.5 1.7E+02  0.0059   24.4   6.4   61   35-96    113-184 (385)
 14 2lw1_A ABC transporter ATP-bin  20.5   2E+02   0.007   19.3   5.6   27   70-96     20-46  (89)
 15 4h8s_A DCC-interacting protein  20.1 1.8E+02  0.0061   24.5   5.8   60   36-96    137-207 (407)

No 1  
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=74.27  E-value=8.9  Score=29.94  Aligned_cols=77  Identities=16%  Similarity=0.266  Sum_probs=47.3

Q ss_pred             hHHHHH-HhhhHHHHHHhhccC--CCCCCchhhhHHHHHHHHHHhHHHHHHHHHHHHhhhCC--CCChhHHhhhhhHHHH
Q psy4337          43 IVIDDL-DQFESEIESLLVGKK--KRLDKDKQDRMDELKAKVERHRYHIRKLETLLRMLDNM--SVEVDQIRRIKDDVEY  117 (174)
Q Consensus        43 ~~Id~L-e~~EaEvEsL~~~kK--kK~~~~~~~r~~~l~~~ierhk~Hi~kLE~llR~L~N~--~l~~e~v~~ikediey  117 (174)
                      .+|++| |..-+|...+....+  ++-.  .+.=.+.++.+++-++-||.+||.|++.+.-.  .+..+.+..|-...+-
T Consensus        16 lf~~~L~Diy~aE~q~~~aL~~~~~~a~--~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~~~~~c~am~gli~e~~~   93 (173)
T 2gyq_A           16 LLLHGLRDIYYAEQQITKALPKMIEQAT--NRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIDGLIKEADE   93 (173)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHH
Confidence            456666 655555444411111  1111  13345568888888999999999999999754  3343666666666555


Q ss_pred             HHhh
Q psy4337         118 YIES  121 (174)
Q Consensus       118 Yve~  121 (174)
                      .++.
T Consensus        94 ~~~~   97 (173)
T 2gyq_A           94 TAGE   97 (173)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            5555


No 2  
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=72.31  E-value=4.6  Score=31.38  Aligned_cols=77  Identities=14%  Similarity=0.221  Sum_probs=46.4

Q ss_pred             hHHHHH-HhhhHHHHHHhhccC--CCCCCchhhhHHHHHHHHHHhHHHHHHHHHHHHh-hhCC--CCChhHHhhhhhHHH
Q psy4337          43 IVIDDL-DQFESEIESLLVGKK--KRLDKDKQDRMDELKAKVERHRYHIRKLETLLRM-LDNM--SVEVDQIRRIKDDVE  116 (174)
Q Consensus        43 ~~Id~L-e~~EaEvEsL~~~kK--kK~~~~~~~r~~~l~~~ierhk~Hi~kLE~llR~-L~N~--~l~~e~v~~ikedie  116 (174)
                      .+|++| |..-+|...+....+  ++-.  .+.=.+.++.+++-++-||.+||.+++. +.-.  .+..+.+..|-..-.
T Consensus         9 lf~~~L~D~y~aE~q~~~al~~~~~~a~--~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~~~~~c~am~gli~e~~   86 (166)
T 2gs4_A            9 VFIHLLSDTYSAEKQLTRALAKLARATS--NEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEAN   86 (166)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence            356667 655555544411111  1221  1344556888888999999999999999 8643  333366666555555


Q ss_pred             HHHhh
Q psy4337         117 YYIES  121 (174)
Q Consensus       117 yYve~  121 (174)
                      -.++.
T Consensus        87 ~~~~~   91 (166)
T 2gs4_A           87 EVIES   91 (166)
T ss_dssp             HHHTS
T ss_pred             HHHhc
Confidence            55544


No 3  
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=68.57  E-value=9.5  Score=26.78  Aligned_cols=39  Identities=21%  Similarity=0.259  Sum_probs=30.8

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHhhhCCCCChhHHh
Q psy4337          71 QDRMDELKAKVERHRYHIRKLETLLRMLDNMSVEVDQIR  109 (174)
Q Consensus        71 ~~r~~~l~~~ierhk~Hi~kLE~llR~L~N~~l~~e~v~  109 (174)
                      .+|-++.........-+..||+.++.+|..+.|+|+++-
T Consensus        41 eERree~~~~~~~~~er~~Kl~~~~e~l~~~GI~~eeL~   79 (86)
T 3nr7_A           41 NERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELL   79 (86)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence            345555555566677789999999999999999998764


No 4  
>1wmi_B RELB, hypothetical protein PHS014; toxin-antitoxin complex, hydrolase-hydrolase inhibitor compl; 2.30A {Pyrococcus horikoshii} SCOP: a.137.13.1
Probab=59.24  E-value=7.3  Score=26.05  Aligned_cols=38  Identities=18%  Similarity=0.378  Sum_probs=28.5

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHhhhCC-CCChhHHhhhhh
Q psy4337          76 ELKAKVERHRYHIRKLETLLRMLDNM-SVEVDQIRRIKD  113 (174)
Q Consensus        76 ~l~~~ierhk~Hi~kLE~llR~L~N~-~l~~e~v~~ike  113 (174)
                      ..-.-++|.|-||++||-+|=-+.-+ .+.-+++..|..
T Consensus         8 ~vl~ELeRlkveiQRLE~ml~p~~~~e~v~eeEl~ei~~   46 (67)
T 1wmi_B            8 DVLKELERLKVEIQRLEAMLMPEERDEDITEEEIAELLE   46 (67)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCBCCCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHH
Confidence            35566889999999999988745555 488777777654


No 5  
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=39.87  E-value=24  Score=25.46  Aligned_cols=22  Identities=23%  Similarity=0.443  Sum_probs=18.1

Q ss_pred             HHHHHHHHHhhhCCCCChhHHh
Q psy4337          88 IRKLETLLRMLDNMSVEVDQIR  109 (174)
Q Consensus        88 i~kLE~llR~L~N~~l~~e~v~  109 (174)
                      +.+||.|++.|+++.|.-++.-
T Consensus        36 l~eLEeIV~~LE~gel~LEesl   57 (100)
T 1vp7_A           36 LAELESLVSAMENGTLPLEQSL   57 (100)
T ss_dssp             HHHHHHHHHHHHTTCSCHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCHHHHH
Confidence            5679999999999999866544


No 6  
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=35.82  E-value=45  Score=23.36  Aligned_cols=20  Identities=35%  Similarity=0.760  Sum_probs=10.6

Q ss_pred             hHHHHHHHHHHhHHHHHHHH
Q psy4337          73 RMDELKAKVERHRYHIRKLE   92 (174)
Q Consensus        73 r~~~l~~~ierhk~Hi~kLE   92 (174)
                      .|..++..|+||+--|..|+
T Consensus        59 ei~~le~~i~rhk~~i~~l~   78 (84)
T 1gmj_A           59 EIERLQKEIERHKQSIKKLK   78 (84)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhh
Confidence            45555555555555555543


No 7  
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=35.02  E-value=1e+02  Score=21.62  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=32.2

Q ss_pred             hhHHHHHHHHHHhHHHHHHHHHHHHhhhC-CCCChhHHhh
Q psy4337          72 DRMDELKAKVERHRYHIRKLETLLRMLDN-MSVEVDQIRR  110 (174)
Q Consensus        72 ~r~~~l~~~ierhk~Hi~kLE~llR~L~N-~~l~~e~v~~  110 (174)
                      ..+.+.+.++.+.|-.|.-||..|..+.+ ..+.|..+-.
T Consensus        12 ~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~   51 (93)
T 3t98_B           12 VLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSM   51 (93)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence            35778899999999999999999999887 4667876664


No 8  
>3hiu_A Uncharacterized protein; APC40011, XCC3681, xanthomonas campestris PV. campestris STR. ATCC 33913, structural genomics, PSI-2; HET: MSE; 1.85A {Xanthomonas campestris PV}
Probab=32.10  E-value=62  Score=24.99  Aligned_cols=29  Identities=14%  Similarity=0.228  Sum_probs=22.3

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHhhhCC
Q psy4337          73 RMDELKAKVERHRYHIRKLETLLRMLDNM  101 (174)
Q Consensus        73 r~~~l~~~ierhk~Hi~kLE~llR~L~N~  101 (174)
                      =.+.++.+++--+-||.+||.|+..+.-.
T Consensus        38 Lk~a~e~Hl~eT~~qi~rLe~vf~~lg~~   66 (166)
T 3hiu_A           38 LKRRIEQHVEETQQQSAGVQRCLELLNGS   66 (166)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            34456666667789999999999998654


No 9  
>3ogh_B Protein YCIE; iron-binding, MCSG, four-helix-bundle, structural genomics, protein structure initiative; HET: MSE; 1.65A {Escherichia coli O6}
Probab=30.37  E-value=68  Score=24.91  Aligned_cols=28  Identities=21%  Similarity=0.269  Sum_probs=21.8

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHhhhC
Q psy4337          73 RMDELKAKVERHRYHIRKLETLLRMLDN  100 (174)
Q Consensus        73 r~~~l~~~ierhk~Hi~kLE~llR~L~N  100 (174)
                      =.+.++.+++--+-||.+||.|+..+.-
T Consensus        41 Lk~a~e~Hl~eT~~qi~rLe~vf~~lg~   68 (171)
T 3ogh_B           41 LRARIEQHLSETKNQIVQLETILDRNDI   68 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            3455666777778999999999999854


No 10 
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=28.61  E-value=1.1e+02  Score=24.35  Aligned_cols=61  Identities=13%  Similarity=0.105  Sum_probs=34.4

Q ss_pred             ccCcchhhHHHHH-----------HhhhHHHHHHhhccCCCCCCchhhhHHHHHHHHHHhHHHHHHHHHHHHh
Q psy4337          36 GRKFVPTIVIDDL-----------DQFESEIESLLVGKKKRLDKDKQDRMDELKAKVERHRYHIRKLETLLRM   97 (174)
Q Consensus        36 e~~~wL~~~Id~L-----------e~~EaEvEsL~~~kKkK~~~~~~~r~~~l~~~ierhk~Hi~kLE~llR~   97 (174)
                      |...|+++-|...           ..+++-+.+.++.+|+|.. ...-+-++-+-...|..|+...|+.+..+
T Consensus       114 PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~-e~~l~Ea~~~l~~~Rk~f~~~~ldyv~~l  185 (265)
T 2q12_A          114 PITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKREN-DKVKYEVTEDVYTSRKKQHQTMMHYFCAL  185 (265)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666666666655           2334444444334444421 11112344556667899999999988865


No 11 
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=25.56  E-value=1.1e+02  Score=22.61  Aligned_cols=61  Identities=11%  Similarity=-0.013  Sum_probs=39.6

Q ss_pred             cchhhHHHHH-HhhhHHHHHHhhccCCCCCCchhhhHHHHHHHHHHhHHHHHHHHHHHHhhh
Q psy4337          39 FVPTIVIDDL-DQFESEIESLLVGKKKRLDKDKQDRMDELKAKVERHRYHIRKLETLLRMLD   99 (174)
Q Consensus        39 ~wL~~~Id~L-e~~EaEvEsL~~~kKkK~~~~~~~r~~~l~~~ierhk~Hi~kLE~llR~L~   99 (174)
                      +..+.+|+.| +.++.+......-++--.+-....=...+..+...|+-|+..|...++.+.
T Consensus         7 ~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~~d~~lk~~f~~~a~~~~~~~~eL~~~i~~lG   68 (153)
T 4etr_A            7 TNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDPQLKAAMLEQSRDCAAAADELERIVLELG   68 (153)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3456788888 777777777621111000111233456688888999999999999999874


No 12 
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=24.71  E-value=64  Score=27.82  Aligned_cols=27  Identities=26%  Similarity=0.313  Sum_probs=23.2

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHhhh
Q psy4337          73 RMDELKAKVERHRYHIRKLETLLRMLD   99 (174)
Q Consensus        73 r~~~l~~~ierhk~Hi~kLE~llR~L~   99 (174)
                      =...++..+..|+.|+.+||.-|..|.
T Consensus       241 ~~~~~~~i~~~~~~h~~~l~~~~~~~g  267 (365)
T 3fse_A          241 AKALFQEMITNKQRHIEYLETYLTRLG  267 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            455788999999999999999998863


No 13 
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=23.50  E-value=1.7e+02  Score=24.44  Aligned_cols=61  Identities=13%  Similarity=0.058  Sum_probs=30.3

Q ss_pred             hccCcchhhHHHHH----Hh-------hhHHHHHHhhccCCCCCCchhhhHHHHHHHHHHhHHHHHHHHHHHH
Q psy4337          35 EGRKFVPTIVIDDL----DQ-------FESEIESLLVGKKKRLDKDKQDRMDELKAKVERHRYHIRKLETLLR   96 (174)
Q Consensus        35 ~e~~~wL~~~Id~L----e~-------~EaEvEsL~~~kKkK~~~~~~~r~~~l~~~ierhk~Hi~kLE~llR   96 (174)
                      .|...|+++-|...    ..       +++-+++.++.+|+|.. +....-++.+-...|..||...|+.++.
T Consensus       113 ~PL~~f~~~di~~~ke~kk~fek~~~~yd~al~k~~~~~k~k~~-e~~~~ea~~~l~~~rk~f~~~~ldy~~~  184 (385)
T 2q13_A          113 FPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKREN-DKVKYEVTEDVYTSRKKQHQTMMHYFCA  184 (385)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCch-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35566666666555    22       33333444444444422 1111112244556777787777777663


No 14 
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=20.49  E-value=2e+02  Score=19.33  Aligned_cols=27  Identities=19%  Similarity=0.268  Sum_probs=20.0

Q ss_pred             hhhhHHHHHHHHHHhHHHHHHHHHHHH
Q psy4337          70 KQDRMDELKAKVERHRYHIRKLETLLR   96 (174)
Q Consensus        70 ~~~r~~~l~~~ierhk~Hi~kLE~llR   96 (174)
                      -+..++.|...|+..--.|..|+..|-
T Consensus        20 eqrEle~le~~Ie~LE~~i~~le~~la   46 (89)
T 2lw1_A           20 LQRELEQLPQLLEDLEAKLEALQTQVA   46 (89)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            345688888888888888888877664


No 15 
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=20.10  E-value=1.8e+02  Score=24.53  Aligned_cols=60  Identities=10%  Similarity=0.075  Sum_probs=29.1

Q ss_pred             ccCcchhhHHHHH----H-------hhhHHHHHHhhccCCCCCCchhhhHHHHHHHHHHhHHHHHHHHHHHH
Q psy4337          36 GRKFVPTIVIDDL----D-------QFESEIESLLVGKKKRLDKDKQDRMDELKAKVERHRYHIRKLETLLR   96 (174)
Q Consensus        36 e~~~wL~~~Id~L----e-------~~EaEvEsL~~~kKkK~~~~~~~r~~~l~~~ierhk~Hi~kLE~llR   96 (174)
                      |...|+++-|..+    .       .+++-+.+.++.+|+|...... .-...+-...|..||...|+.+..
T Consensus       137 pL~~f~k~di~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~k~~~~~~-~e~~~~l~~~Rk~f~~asldyv~~  207 (407)
T 4h8s_A          137 PIIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENEKVK-TEVGKEVAAARRKQHLSSLQYYCA  207 (407)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSTTCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5556666666655    2       2333344444444444331111 111223444677777777776644


Done!