RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4341
         (211 letters)



>d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi
           [TaxId: 556]}
          Length = 325

 Score = 28.2 bits (62), Expect = 0.82
 Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 16  GVLMCLGDTIQQTIELYTKVDKTGYDLKRVAHMGIIGLVMGPPQHFFYKYLDKYLPKRSG 75
           GV++ + D I     + TK + +  D  R    G +G+++G   ++  +    +  +   
Sbjct: 149 GVMVVINDRIGSARYI-TKTNASTLDTFRANEEGYLGVIIGNRIYYQNRIDKLHTTRSVF 207

Query: 76  KSIALKLC----------------FDQAIISPVCIIIF-LYGMGILEAKPKDEIKEEIRD 118
               L                   +D AI   V  I++   G G +  +    +++ +  
Sbjct: 208 DVRGLTSLPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEK 267

Query: 119 KFLVIYTTDCL 129
             +V+ +T   
Sbjct: 268 GVVVMRSTRTG 278


>d2f8aa1 c.47.1.10 (A:12-195) Glutathione peroxidase {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 184

 Score = 25.7 bits (55), Expect = 4.4
 Identities = 15/60 (25%), Positives = 22/60 (36%)

Query: 34  KVDKTGYDLKRVAHMGIIGLVMGPPQHFFYKYLDKYLPKRSGKSIALKLCFDQAIISPVC 93
           K  + G   +    +     V G   H  + +L + LP  S  + AL         SPVC
Sbjct: 84  KYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVC 143


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.144    0.434 

Gapped
Lambda     K      H
   0.267   0.0452    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 831,725
Number of extensions: 40396
Number of successful extensions: 77
Number of sequences better than 10.0: 1
Number of HSP's gapped: 77
Number of HSP's successfully gapped: 8
Length of query: 211
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 130
Effective length of database: 1,295,466
Effective search space: 168410580
Effective search space used: 168410580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.1 bits)