Query psy4345
Match_columns 161
No_of_seqs 119 out of 284
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 23:13:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m0w_A Glutathione synthetase; 100.0 1.2E-75 3.9E-80 530.2 8.8 158 4-161 270-491 (491)
2 2hgs_A Protein (glutathione sy 100.0 5.7E-75 2E-79 523.8 8.8 157 4-161 254-474 (474)
3 3kal_A Homoglutathione synthet 100.0 7.1E-75 2.4E-79 525.5 8.6 154 4-161 282-499 (499)
4 2wyo_A Glutathione synthetase; 100.0 5.3E-72 1.8E-76 511.9 6.2 158 4-161 317-561 (562)
5 3n6x_A Putative glutathionylsp 80.7 0.14 4.6E-06 46.3 -2.5 108 9-130 268-385 (474)
6 2lnm_A Protein TIC 40, chlorop 66.4 6.2 0.00021 25.6 3.5 32 56-87 25-59 (62)
7 2llv_A Heat shock protein STI1 41.8 26 0.0009 23.2 3.5 29 56-84 36-65 (71)
8 2llw_A Heat shock protein STI1 29.5 28 0.00096 23.4 2.0 51 27-84 8-61 (71)
9 2cqy_A Propionyl-COA carboxyla 28.5 24 0.00081 23.2 1.5 16 110-125 47-62 (108)
10 2cs3_A Protein C14ORF4, MY039 22.3 5.8 0.0002 28.4 -2.6 22 34-55 22-43 (93)
No 1
>1m0w_A Glutathione synthetase; amine/carboxylate ligase, structural genomics, PSI, protein structure initiative; HET: ANP 3GC; 1.80A {Saccharomyces cerevisiae} SCOP: c.30.1.4 d.142.1.6 PDB: 1m0t_A*
Probab=100.00 E-value=1.2e-75 Score=530.16 Aligned_cols=158 Identities=47% Similarity=0.809 Sum_probs=154.3
Q ss_pred CCcCC--ceEEEEEeccCCCCCCCCCHHHHHHHHHhhHhccccCCchHHHhhhhHHHHHHhcChhhhhhccCCHHHHHHH
Q psy4345 4 NYRDG--SPVAVIYFRAGYTPDHYYSQLEWDARLLMERSTAIKCPSIHYHLAGAKKVQQALAKEGTLEKFLSDPNQIQAV 81 (161)
Q Consensus 4 ~~~~~--~eVsvvYfRagY~P~dY~se~~W~~R~~lE~S~AIKcPsi~~qLag~KKvQq~L~~p~~L~~fl~~~~~~~~i 81 (161)
|+++| .||||||||+||+|+|||+|++|++|++||+|+|||||||++||||||||||+|++|++|+||+++++++++|
T Consensus 270 L~~~~~~~eVaVVYfRaGY~P~dY~se~~W~aRl~lE~S~AIKcPsi~~qLaGtKKvQQ~La~p~vLerfl~~~~~~~~l 349 (491)
T 1m0w_A 270 LFIRDTEQEIAVVYYRTGYTTTDYTSEKDWEARLFLEKSFAIKAPDLLTQLSGSKKIQQLLTDEGVLGKYISDAEKKSSL 349 (491)
T ss_dssp EEETTTCCEEEEEEEESCSSGGGCCSHHHHHHHHHHHHSSSEEETCHHHHHHTCHHHHHHTTSHHHHTTTCCCHHHHHHH
T ss_pred EEEcCCceEEEEEEecCCCChhhCCchhHHHHHHHHHhcCceeCCCHHHHHhhhHHHHHHhCChhHHHhhcCCHHHHHHH
Confidence 67788 8999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred HHHhcccccCCCChhhhHHHHHhhcCCCCceecCCCCCCcccccCCCcC-------------------------------
Q psy4345 82 KEIFTGLWSLDYDKEGDAAVEMALKDPGKYVLKPQREGGGNNIYGDLIP------------------------------- 130 (161)
Q Consensus 82 r~~F~~~~~Ld~~~~g~~~v~~a~~~p~~yVLKPQrEGGGnniyg~~I~------------------------------- 130 (161)
|+||++||+||.+++|.+++++|+++|++||||||||||||||||+||+
T Consensus 350 r~tFa~ly~Ld~~~~g~~~~~~A~~~p~~~VLKPQREGGGNNiYg~dI~~~L~~l~~~e~~ayILMerI~Pp~~~~~~~v 429 (491)
T 1m0w_A 350 LKTFVKIYPLDDTKLGREGKRLALSEPSKYVLKPQREGGGNNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIIL 429 (491)
T ss_dssp HTTCCCEEECSSSHHHHHHHHHHHHCGGGEEEEESSCSSCCCEEGGGHHHHHHTSCGGGGGGEEEEECCCCCCBCSCCEE
T ss_pred HHhhhcccCCCcchhhhHHHHHHHhChhheeecCcccCCcccccHHHHHHHHHhcCHhhcceeeeeecccCCCCCCeEEE
Confidence 9999999999999999999999999999999999999999999999999
Q ss_pred -------------------------------ccceeeeecCCCCCCCcceeccccccccccC
Q psy4345 131 -------------------------------EVGHMLRSKASTANEGGVAGGAGALDSPYLI 161 (161)
Q Consensus 131 -------------------------------~~G~LlRTK~~~s~EGGVaaG~~~lDS~~L~ 161 (161)
++|||||||++++||||||+||||||||+|+
T Consensus 430 R~g~~~~~~~iSELGIfG~~l~~~~~v~~N~~~G~LlRTK~~~s~EGGVaaG~g~lDS~~L~ 491 (491)
T 1m0w_A 430 RDNKSYNEPIISELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNEGGVAAGFGCLDSIILY 491 (491)
T ss_dssp ETTEEECCCBEEEEEEEEEEEECSSCEEEEEEEEEEEEEECCEEETTEEEECCEEECCEEEC
T ss_pred ECCccccCCeeecccceEEEEECCCEEEEecceeEEEEecCCCCCCCCeeeeeecccceeeC
Confidence 6899999999999999999999999999996
No 2
>2hgs_A Protein (glutathione synthetase); amine/carboxylate ligase; HET: ADP GSH; 2.10A {Homo sapiens} SCOP: c.30.1.4 d.142.1.6
Probab=100.00 E-value=5.7e-75 Score=523.84 Aligned_cols=157 Identities=52% Similarity=0.953 Sum_probs=152.9
Q ss_pred CCcCCceEEEEEeccCCCCCCCCCHHHHHHHHHhhHhccccCCchHHHhhhhHHHHHHhcChhhhhhcc-CCHHHHHHHH
Q psy4345 4 NYRDGSPVAVIYFRAGYTPDHYYSQLEWDARLLMERSTAIKCPSIHYHLAGAKKVQQALAKEGTLEKFL-SDPNQIQAVK 82 (161)
Q Consensus 4 ~~~~~~eVsvvYfRagY~P~dY~se~~W~~R~~lE~S~AIKcPsi~~qLag~KKvQq~L~~p~~L~~fl-~~~~~~~~ir 82 (161)
|+++|.||||||||+||+|+|| +|.+|++|++||+|+|||||||++||||||||||+|++|++|+||+ .+++++++||
T Consensus 254 L~~~~~eVaVVYfRaGY~P~dY-se~~W~aRl~lE~S~AIKcPsi~~qLaGtKKvQQ~La~p~vLerfl~~~~~~~~~lr 332 (474)
T 2hgs_A 254 LFVDGQEIAVVYFRDGYMPRQY-SLQNWEARLLLERSHAAKCPDIATQLAGTKKVQQELSRPGMLEMLLPGQPEAVARLR 332 (474)
T ss_dssp EEETTEEEEEEEESSCSSGGGC-CHHHHHHHHHHHHSSSEEESCHHHHHTTSHHHHHHTTSTTHHHHHSTTCHHHHHHHH
T ss_pred EEEcCEEEEEEEecCCCChhhc-chHHHHHHHHHHhcCceeCCCHHHHHhhhHHHHHHhcChhHHhhhcCCCHHHHHHHH
Confidence 6789999999999999999999 9999999999999999999999999999999999999999999999 5788999999
Q ss_pred HHhcccccCCCChhhhHHHHHhhcCCCCceecCCCCCCcccccCCCcC--------------------------------
Q psy4345 83 EIFTGLWSLDYDKEGDAAVEMALKDPGKYVLKPQREGGGNNIYGDLIP-------------------------------- 130 (161)
Q Consensus 83 ~~F~~~~~Ld~~~~g~~~v~~a~~~p~~yVLKPQrEGGGnniyg~~I~-------------------------------- 130 (161)
+||++||+||.+++|++++++|+++|++||||||||||||||||+||+
T Consensus 333 ~tFa~ly~Ld~~~~g~~~~~~A~~~p~~~VLKPQREGGGNNiYg~dI~~~L~~l~~~e~~~ayILMerI~Pp~~~~~~vR 412 (474)
T 2hgs_A 333 ATFAGLYSLDVGEEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQLKDSEERASYILMEKIEPEPFENCLLR 412 (474)
T ss_dssp HTCCCEEECSSSHHHHHHHHHHHHSGGGEEEEESCCSSSCCBCHHHHHHHHHHHTTSGGGGGEEEEECCCCCCEEEEEEC
T ss_pred HhhhcccCCCcchhhhHHHHHHHhCchheeecCcccCCccccchHHHHHHHHhcCCcccceeeeeeecccCCCCCeEEEE
Confidence 999999999999999999999999999999999999999999999998
Q ss_pred -------------------------------ccceeeeecCCCCCCCcceeccccccccccC
Q psy4345 131 -------------------------------EVGHMLRSKASTANEGGVAGGAGALDSPYLI 161 (161)
Q Consensus 131 -------------------------------~~G~LlRTK~~~s~EGGVaaG~~~lDS~~L~ 161 (161)
++|||||||++++||||||+||||||||+|+
T Consensus 413 ~g~~~~~~~~iSELGIfg~~l~~~~~v~~N~~~G~LlRTK~~~s~EGGVaaG~g~lDS~~L~ 474 (474)
T 2hgs_A 413 PGSPARVVQCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYPV 474 (474)
T ss_dssp TTSCCEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEEC
T ss_pred CCccccccceeeccceeEEEEECCCEEEEecceeEEEEecCCCCCCCCeeeeeecccceeeC
Confidence 7899999999999999999999999999996
No 3
>3kal_A Homoglutathione synthetase; dimer, ATP-grAsp domain; HET: ADP HGS; 1.90A {Glycine max} PDB: 3kak_A* 3kaj_A*
Probab=100.00 E-value=7.1e-75 Score=525.48 Aligned_cols=154 Identities=54% Similarity=0.960 Sum_probs=149.4
Q ss_pred CCcCCceEEEEEeccCCCCCCCCCHHHHHHHHHhhHhccccCCchHHHhhhhHHHHHHhcChhhhhhccCCHHHHHHHHH
Q psy4345 4 NYRDGSPVAVIYFRAGYTPDHYYSQLEWDARLLMERSTAIKCPSIHYHLAGAKKVQQALAKEGTLEKFLSDPNQIQAVKE 83 (161)
Q Consensus 4 ~~~~~~eVsvvYfRagY~P~dY~se~~W~~R~~lE~S~AIKcPsi~~qLag~KKvQq~L~~p~~L~~fl~~~~~~~~ir~ 83 (161)
|+++|.||||||||+||+|+|||++++|++|++||+|+|||||||++||||||||||+|++|++|+||+++++++++||+
T Consensus 282 L~~~g~eVaVVYfRaGY~P~dYpse~~W~aRl~lE~S~AIKCPsI~~qLaGtKKVQQ~La~p~vLerFl~~~~~~~~lr~ 361 (499)
T 3kal_A 282 LSVDGQAISVVYFRAGYTPKDYPSESEWRARLLMEQSSAIKCPTISYHLVGTKKIQQELAKPGVLERFVENKDHIAKLRA 361 (499)
T ss_dssp EEETTEEEEEEEEESCSSGGGCSSHHHHHHHHHHHHSSSEEETCHHHHHHTSHHHHHHTTSTTTHHHHCCCHHHHHHHHH
T ss_pred eEEcceEEEEEEeecCcCcccCCCHHHHHHHHHHHhcCcccCCCHHHHHhhhHHHHHHhcCchHHHHhcCCHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred HhcccccCCCChhhhHHHHHhhcCCCCceecCCCCCCcccccCCCcC---------------------------------
Q psy4345 84 IFTGLWSLDYDKEGDAAVEMALKDPGKYVLKPQREGGGNNIYGDLIP--------------------------------- 130 (161)
Q Consensus 84 ~F~~~~~Ld~~~~g~~~v~~a~~~p~~yVLKPQrEGGGnniyg~~I~--------------------------------- 130 (161)
||++||+||.+ +++++|+++|++||||||||||||||||+||+
T Consensus 362 tFa~ly~LD~~----~~~~~a~~~p~~~VLKPQREGGGNNiYg~dI~~~L~~l~~~~~~e~~ayILMerI~Pp~~~n~lv 437 (499)
T 3kal_A 362 CFAGLWSLEDS----DIVKKAIENPELFVMKPQREGGGNNIYGDELRETLLKLQEAGSQEDAAYILMQRIFPATSPAILV 437 (499)
T ss_dssp HCCCEEETTCT----THHHHHHHCGGGEEEECSCCSSSCCBCHHHHHHHHHHCCC-----GGGCEEEECCCCCCEEEEEE
T ss_pred HhhccCCCCch----HHHHhhhhCHHHeeecccccCCccccchHHHHHHHHhcCccchhhHHHHHHHhhcCCCCCCeEEE
Confidence 99999999985 38999999999999999999999999999998
Q ss_pred -------------------------------ccceeeeecCCCCCCCcceeccccccccccC
Q psy4345 131 -------------------------------EVGHMLRSKASTANEGGVAGGAGALDSPYLI 161 (161)
Q Consensus 131 -------------------------------~~G~LlRTK~~~s~EGGVaaG~~~lDS~~L~ 161 (161)
++|||||||++++|||||||||||||||+|+
T Consensus 438 R~g~~~~~~~iSELGIfG~~l~~~~~i~~N~~~G~LlRTK~~~s~EGGVaaG~g~LDS~~L~ 499 (499)
T 3kal_A 438 RDGNWDTGHVISEAGIFGTYLRNKDKIIINNESGYMVRTKISSSYEGGVLPGFGVVDTVYLT 499 (499)
T ss_dssp ETTEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSCCCTTTTTCEEECEEEC
T ss_pred ECCccccCCeeeeccceEEEEeCCCeEEEcCcceEEEecCCCCCCCCCeeeeeeeccceeeC
Confidence 7899999999999999999999999999996
No 4
>2wyo_A Glutathione synthetase; ligase, ATP-grAsp; HET: GSH; 3.15A {Trypanosoma brucei}
Probab=100.00 E-value=5.3e-72 Score=511.92 Aligned_cols=158 Identities=41% Similarity=0.688 Sum_probs=144.1
Q ss_pred CCcCC-ceEEEEEeccCCCCCCCCCHHHHHHHHHhhHhccccCCchHHHhhhhHHHHHHhcChh-hhhhc--cCCHHHHH
Q psy4345 4 NYRDG-SPVAVIYFRAGYTPDHYYSQLEWDARLLMERSTAIKCPSIHYHLAGAKKVQQALAKEG-TLEKF--LSDPNQIQ 79 (161)
Q Consensus 4 ~~~~~-~eVsvvYfRagY~P~dY~se~~W~~R~~lE~S~AIKcPsi~~qLag~KKvQq~L~~p~-~L~~f--l~~~~~~~ 79 (161)
|+++| .||||||||+||+|+|||+|.+|++|++||+|+|||||||++||||||||||+|++|+ +|+|| ++|+++++
T Consensus 317 L~~~g~~eVaVVYfRaGY~P~dYpse~~W~aRl~lE~S~AIKCPsI~~qLaGtKKVQQ~La~p~~vLerf~~l~~~~~~~ 396 (562)
T 2wyo_A 317 AVVDGHYPIAVAYFRSTYVPEDFPTDATWAARLSLERSSAIKCPSIPYHLLTFKKLQQLLCDVDRVLVPVAFCGDSDKAG 396 (562)
T ss_dssp EEETTTEEEEEEEEESCSSGGGCCSHHHHHHHHHHHHSSCEEETCHHHHHTTSHHHHHHTTCCCCCCCCCCSTTCHHHHH
T ss_pred EEecCceEEEEEEecCCCChhhCCchhhHHHHHHHHhcCcccCCCHHHHHhhhHHHHHHhcCchhhhhhhhcCCCHHHHH
Confidence 67899 9999999999999999999999999999999999999999999999999999999999 99999 98889999
Q ss_pred HHHHHhcccccCCCChhhhHH----HHHhhcCCCCceecCCCCCCcccccCCCcC-------------------------
Q psy4345 80 AVKEIFTGLWSLDYDKEGDAA----VEMALKDPGKYVLKPQREGGGNNIYGDLIP------------------------- 130 (161)
Q Consensus 80 ~ir~~F~~~~~Ld~~~~g~~~----v~~a~~~p~~yVLKPQrEGGGnniyg~~I~------------------------- 130 (161)
.||+||++||+||.++.|+++ +++|+++|++||||||||||||||||+||+
T Consensus 397 ~lr~tFa~ly~Ld~~~~g~~~~~~~~~~A~~~p~~~VLKPQREGGGNNiyG~dI~~~L~~l~~~~~~~~~~e~~ayILMe 476 (562)
T 2wyo_A 397 LLQRHFVPQYSLNPKEVGEEAVEKVIHDVLQRPDQFVLKPQLEGGGNLLSGETMVKALKATKEGDPVTYSKVRCEYVVMS 476 (562)
T ss_dssp HHHTTCCCEEECSCSSCTTTTHHHHHHSTTSCCCCCSSSCCSCCCSSHHHHHHCC------------CTTTTTSSCEEEC
T ss_pred HHHHhhhcccCCCcchhhhhhhHHHHHHHhhChhheeecCCccCCccccchHHHHHHHHhcCCccccccccccceeEEEe
Confidence 999999999999998878778 999999999999999999999999999887
Q ss_pred ------------------------------------------------------ccceeeeecCCCCCCCcceecccccc
Q psy4345 131 ------------------------------------------------------EVGHMLRSKASTANEGGVAGGAGALD 156 (161)
Q Consensus 131 ------------------------------------------------------~~G~LlRTK~~~s~EGGVaaG~~~lD 156 (161)
++|||||||++++|||||||||||||
T Consensus 477 rI~Pp~~~~~~vR~g~~~~~~~~~iSELGIfG~~l~~~~~~~~~~~~~~v~~N~~~GyLlRTK~~~s~EGGVaaG~g~LD 556 (562)
T 2wyo_A 477 RIQFHVSTGSLLARGDVVQLERNMCSEVGIFGVILSAAKGSSVGTNGSSVLFNTFAGYTVRSKPADADDGGVMAGVAALD 556 (562)
T ss_dssp CCCBCCEEEEEEETTEEEEEEEEEEEEEEEEEEEEECCTTCCSSGGGCSEEEEEEEEEEEEEEETTC--------CCCEE
T ss_pred cccCCCCCeEEEECCccccccCCeeeecceeEEEEECCCcccccCCCCceEeccceeEEEEecCCCCCCCCeeeeeeccc
Confidence 26999999999999999999999999
Q ss_pred ccccC
Q psy4345 157 SPYLI 161 (161)
Q Consensus 157 S~~L~ 161 (161)
||+|+
T Consensus 557 S~~L~ 561 (562)
T 2wyo_A 557 SLAVV 561 (562)
T ss_dssp CEEEE
T ss_pred ceeec
Confidence 99985
No 5
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=80.70 E-value=0.14 Score=46.27 Aligned_cols=108 Identities=16% Similarity=0.215 Sum_probs=64.2
Q ss_pred ceEEEEEeccCCCCCCCCCHHH---------HHHHHHhhHhccccCCchHHHhhhhHHHHHHhcChhhhhhccCCHHHHH
Q psy4345 9 SPVAVIYFRAGYTPDHYYSQLE---------WDARLLMERSTAIKCPSIHYHLAGAKKVQQALAKEGTLEKFLSDPNQIQ 79 (161)
Q Consensus 9 ~eVsvvYfRagY~P~dY~se~~---------W~~R~~lE~S~AIKcPsi~~qLag~KKvQq~L~~p~~L~~fl~~~~~~~ 79 (161)
++|.|||=|. .++|-++.+ =-.......-+..-+..+..+++.+|-++-.|.+ ..+.|+. ++
T Consensus 268 ~~VDVIyRRv---dd~~lDpl~~~~dS~lGv~gLl~A~r~G~V~i~Na~gsgv~~dKal~a~Lp~--l~~~~lg-Ee--- 338 (474)
T 3n6x_A 268 KRVDVIYRRI---DDDFIDPLSFRPDSMLGVPGLLSVYRNGGVTLANAVGTGVADDKDTYIYVPE--MIRFYLG-EE--- 338 (474)
T ss_dssp EEECEEEECS---CGGGSCTTTSCTTCSSSCTTHHHHHHTTSCEEESCTTTHHHHSTTTGGGHHH--HHHHHHC-SC---
T ss_pred eEEEEEEEcC---CHHhcCccccCCCcccccHHHHHHHHcCCEEEeCCCchhhhcCcHHHHHhHH--HHHHhCC-Hh---
Confidence 7999999887 455554322 1233334444555667778899999999988853 3444443 22
Q ss_pred HHHHHhcccccCCCChhhhHHHHHhhcCCCCceecCCCCCCc-ccccCCCcC
Q psy4345 80 AVKEIFTGLWSLDYDKEGDAAVEMALKDPGKYVLKPQREGGG-NNIYGDLIP 130 (161)
Q Consensus 80 ~ir~~F~~~~~Ld~~~~g~~~v~~a~~~p~~yVLKPQrEGGG-nniyg~~I~ 130 (161)
.|... .+.|-... .+..+.+++|.+++|+||-.+.|| .-+.|.+..
T Consensus 339 ~il~~-VpT~~c~~----~~~~~~vl~~l~~lViKp~~g~gg~gv~iG~~~s 385 (474)
T 3n6x_A 339 PILSN-VPTYQLSK----ADDLKYVLDNLAELVVKEVQGSGGYGMLVGPAAS 385 (474)
T ss_dssp CSSEE-CCCEETTS----HHHHHHHHHSGGGEEEEECCCE-----EEGGGCC
T ss_pred hhccC-CCceecCC----HHHHHHHHhchhheEEEecCCCCCCceEECCcCC
Confidence 12222 23333322 245667789999999999887666 445666544
No 6
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=66.39 E-value=6.2 Score=25.58 Aligned_cols=32 Identities=13% Similarity=0.335 Sum_probs=22.5
Q ss_pred HHHHHHhcChhhhhhccCCHHH---HHHHHHHhcc
Q psy4345 56 KKVQQALAKEGTLEKFLSDPNQ---IQAVKEIFTG 87 (161)
Q Consensus 56 KKvQq~L~~p~~L~~fl~~~~~---~~~ir~~F~~ 87 (161)
.++|++-++|..+.++++|++- +..|...|.+
T Consensus 25 ~~lq~i~~NP~~~~~~~~dP~v~~~~~~L~~~~~g 59 (62)
T 2lnm_A 25 AALMECSENPMNIMKYQNDKEVMDVFNKISQLFPG 59 (62)
T ss_dssp HHHHHHTTCGGGHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHCHHHHHHHHhChHHHHHHHHHHHHhCC
Confidence 4677788899999999998754 3444455544
No 7
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=41.76 E-value=26 Score=23.18 Aligned_cols=29 Identities=10% Similarity=0.263 Sum_probs=22.3
Q ss_pred HHHHHHhcChhhhhh-ccCCHHHHHHHHHH
Q psy4345 56 KKVQQALAKEGTLEK-FLSDPNQIQAVKEI 84 (161)
Q Consensus 56 KKvQq~L~~p~~L~~-fl~~~~~~~~ir~~ 84 (161)
.++|++-++|..+.+ +++|++-...|...
T Consensus 36 ~~lq~i~~NP~~i~~~~~~dPrv~~~l~~L 65 (71)
T 2llv_A 36 AKLIGYKQNPQAIGQDLFTDPRLMTIMATL 65 (71)
T ss_dssp HHHHHHHHSCTTHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHCHHHHHHHHhhCcHHHHHHHHH
Confidence 678888899999988 99987655555443
No 8
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=29.45 E-value=28 Score=23.37 Aligned_cols=51 Identities=18% Similarity=0.303 Sum_probs=31.3
Q ss_pred CHHHHHHHHHhhHhccccCCchHHHhhhh---HHHHHHhcChhhhhhccCCHHHHHHHHHH
Q psy4345 27 SQLEWDARLLMERSTAIKCPSIHYHLAGA---KKVQQALAKEGTLEKFLSDPNQIQAVKEI 84 (161)
Q Consensus 27 se~~W~~R~~lE~S~AIKcPsi~~qLag~---KKvQq~L~~p~~L~~fl~~~~~~~~ir~~ 84 (161)
++++|-.|.+ +-|.|.-=+..- ..+|++.++|..+.+|+.+++-...+.++
T Consensus 8 ~~ee~~~~~m-------~dPEi~~im~DP~~~~~lq~~~~NP~~~~k~~~nP~v~~~i~kl 61 (71)
T 2llw_A 8 TPEETYQRAM-------KDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTL 61 (71)
T ss_dssp CHHHHHHHHH-------HSHHHHHHHTCTHHHHHHHHHHHCHHHHHHHHHSHHHHHHHHHH
T ss_pred CcHHHHHHHh-------cCHHHHHHhCCHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHH
Confidence 5567776654 444443333222 23455667999999999888766666554
No 9
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.48 E-value=24 Score=23.16 Aligned_cols=16 Identities=25% Similarity=0.557 Sum_probs=12.9
Q ss_pred CceecCCCCCCccccc
Q psy4345 110 KYVLKPQREGGGNNIY 125 (161)
Q Consensus 110 ~yVLKPQrEGGGnniy 125 (161)
-+|+||...+||..++
T Consensus 47 P~vvKp~~~~~~~gv~ 62 (108)
T 2cqy_A 47 PVMIKASAGGGGKGMR 62 (108)
T ss_dssp SEEEEETTSCCTTTCE
T ss_pred CEEEEECCCCCCccEE
Confidence 4899999998886554
No 10
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=22.35 E-value=5.8 Score=28.41 Aligned_cols=22 Identities=23% Similarity=0.363 Sum_probs=17.6
Q ss_pred HHHhhHhccccCCchHHHhhhh
Q psy4345 34 RLLMERSTAIKCPSIHYHLAGA 55 (161)
Q Consensus 34 R~~lE~S~AIKcPsi~~qLag~ 55 (161)
++.||-++-+.|||+..|---+
T Consensus 22 ~erLEdtHFVQCPsv~~HkFCF 43 (93)
T 2cs3_A 22 HERLEDTHFVQCPSVPSHKFCF 43 (93)
T ss_dssp CSCCSSTTSEECSSCSSCEECH
T ss_pred hhhhccCceeeCCCccCCeeec
Confidence 4578999999999999875443
Done!