RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4347
(816 letters)
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 263 bits (675), Expect = 4e-83
Identities = 103/221 (46%), Positives = 145/221 (65%), Gaps = 3/221 (1%)
Query: 464 IKNKANALPLVLTTSNASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGK 523
IKN A P+ + I+ V+F Y + + I ++N +I G++VA VG SG GK
Sbjct: 1 IKNGVGAQPIEIK--QGRIDIDHVSFQY-NDNEAPILKDINLSIEKGETVAFVGMSGGGK 57
Query: 524 STIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHDTILYNINYGDK 583
ST+I L+ RF++ +G I IDG NI D SLR I +V QD +LF DT+ NI G
Sbjct: 58 STLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRP 117
Query: 584 SKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILV 643
+ + EE +EAAK+A+ H+ I+ P Y+T+VGERG+KLSGG+KQR++IAR L N PIL+
Sbjct: 118 TATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILI 177
Query: 644 FDEATSSLDSITENNILSSLKTASRNKTTICIAHRLSTIKH 684
DEATS+LD +E+ I +L S+++TT+ +AHRLSTI H
Sbjct: 178 LDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITH 218
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 237 bits (605), Expect = 4e-73
Identities = 95/212 (44%), Positives = 142/212 (66%), Gaps = 2/212 (0%)
Query: 474 VLTTSNASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRF 533
V+ + +EFR+V F+Y N+N IPAGK+VA+VG SGSGKSTI L+ RF
Sbjct: 6 VIDRATGDLEFRNVTFTY-PGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF 64
Query: 534 FEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHDTILYNINYG-DKSKSYEETIE 592
++ + G I +DG ++ + L SLR +A+V Q+ LF+DT+ NI Y + S E+ E
Sbjct: 65 YDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEE 124
Query: 593 AAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLD 652
AA++A + I K N +T +GE G+ LSGG++QR+AIARA+L+++PIL+ DEATS+LD
Sbjct: 125 AARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALD 184
Query: 653 SITENNILSSLKTASRNKTTICIAHRLSTIKH 684
+ +E I ++L +N+T++ IAHRLSTI+
Sbjct: 185 TESERAIQAALDELQKNRTSLVIAHRLSTIEQ 216
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 231 bits (590), Expect = 5e-71
Identities = 84/204 (41%), Positives = 126/204 (61%), Gaps = 3/204 (1%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
+ R V+F+Y D ++I +++F +A G SG GKSTI LL RF++P AG I
Sbjct: 2 LSARHVDFAYDDS--EQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEI 59
Query: 542 YIDGKNINDVDLDSLRRHIAIVPQDPVLFHDTILYNINYGDKSKSYEETIE-AAKLADLH 600
IDG+ I+++ L++ R I V QD + TI N+ YG + +E + LA
Sbjct: 60 TIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFAR 119
Query: 601 NSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDSITENNIL 660
+ + P+ T+VGERG+K+SGG++QR+AIARA L+N IL+ DEAT+SLDS +E+ +
Sbjct: 120 SFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQ 179
Query: 661 SSLKTASRNKTTICIAHRLSTIKH 684
+L + + +TT+ IAHRLSTI
Sbjct: 180 KALDSLMKGRTTLVIAHRLSTIVD 203
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 225 bits (575), Expect = 6e-69
Identities = 90/203 (44%), Positives = 132/203 (65%), Gaps = 1/203 (0%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
I FR++ F Y + I N+N +I G+ + IVG SGSGKST+ +L+ RF+ P G +
Sbjct: 2 ITFRNIRFRY-KPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQV 60
Query: 542 YIDGKNINDVDLDSLRRHIAIVPQDPVLFHDTILYNINYGDKSKSYEETIEAAKLADLHN 601
IDG ++ D + LRR + +V QD VL + +I+ NI+ + S E+ I AAKLA H+
Sbjct: 61 LIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHD 120
Query: 602 SIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDSITENNILS 661
I + Y T VGE+G LSGG++QR+AIARA++ N IL+FDEATS+LD +E+ I+
Sbjct: 121 FISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMR 180
Query: 662 SLKTASRNKTTICIAHRLSTIKH 684
++ + +T I IAHRLST+K+
Sbjct: 181 NMHKICKGRTVIIIAHRLSTVKN 203
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 225 bits (574), Expect = 1e-68
Identities = 70/207 (33%), Positives = 121/207 (58%), Gaps = 3/207 (1%)
Query: 481 SIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGA 540
++F+DV+F+Y ++ + L FT+ G+ A+VG +GSGKST+ LL ++P G
Sbjct: 11 LVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQ 70
Query: 541 IYIDGKNINDVDLDSLRRHIAIVPQDPVLFHDTILYNINYGDKSK-SYEETIEAAKLADL 599
+ +DGK + + L R +A V Q+P +F ++ NI YG K + EE AA +
Sbjct: 71 LLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGA 130
Query: 600 HNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDSITENNI 659
H+ I P Y+T+V E G +LSGG++Q VA+ARA+++ +L+ D+ATS+LD+ ++ +
Sbjct: 131 HSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQV 190
Query: 660 LSSLKTASR--NKTTICIAHRLSTIKH 684
L + +++ + I LS ++
Sbjct: 191 EQLLYESPERYSRSVLLITQHLSLVEQ 217
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 192 bits (489), Expect = 3e-56
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 455 FTLMLKEPTIKNKANALPLVLTTSNASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVA 514
F +L++ N + +V+FS++ + N+N I G+ +A
Sbjct: 16 FGELLEKVQQSNGDRKHS---------SDENNVSFSHLCLVGNPVLKNINLNIEKGEMLA 66
Query: 515 IVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHDTI 574
I G +GSGK++++ L+ E + G I G+ ++ Q + TI
Sbjct: 67 ITGSTGSGKTSLLMLILGELEASEGIIKHSGR-------------VSFCSQFSWIMPGTI 113
Query: 575 LYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARA 634
NI +G K L I K+ T +GE G+ LSGG++ R+++ARA
Sbjct: 114 KENIIFGVSYDE-YRYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARA 172
Query: 635 ILKNTPILVFDEATSSLDSITENNIL-SSLKTASRNKTTICIAHRLSTIKH 684
+ K+ + + D LD TE + S + NKT I + ++ ++
Sbjct: 173 VYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILVTSKMEHLRK 223
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 155 bits (393), Expect = 1e-43
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 482 IEFRDVNFSY-IDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGA 540
I+ ++V +Y + + N+N I G+ V+I+G SGSGKST++ ++ +P G
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGE 61
Query: 541 IYIDGKNINDVDLDSLRR----HIAIVPQDPVLF-HDTILYNINYG---------DKSKS 586
+YID ND+D D L + I V Q L T L N+ +
Sbjct: 62 VYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEER 121
Query: 587 YEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDE 646
+ +E K+A+L ++ NH Q LSGG++QRVAIARA+ N PI++ D+
Sbjct: 122 RKRALECLKMAELEE---RFANHKPNQ-------LSGGQQQRVAIARALANNPPIILADQ 171
Query: 647 ATSSLDSITENNILSSLKT--ASRNKTTICIAHRLSTIKH 684
T +LDS T I+ LK KT + + H ++ +
Sbjct: 172 PTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARF 211
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 140 bits (354), Expect = 4e-38
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 480 ASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAG 539
++ ++ + + + LN TI G+ + ++G SG GK+T +R++ EP G
Sbjct: 5 VEVKLENLTKRFGNFT---AVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEG 61
Query: 540 AIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHD-TILYNINYG------DKSKSYEETIE 592
IY +++ L R+I++V Q ++ T+ NI + K + +
Sbjct: 62 RIYFGDRDVT--YLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRW 119
Query: 593 AAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLD 652
AA+L + + ++P +LSGG++QRVA+ARAI+ +L+ DE S+LD
Sbjct: 120 AAELLQIEELLNRYPA-----------QLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLD 168
Query: 653 SITENNILSSLKT--ASRNKTTICIAHRLSTIKHL 685
+ + + +K TTI + H +
Sbjct: 169 AKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTM 203
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 139 bits (351), Expect = 8e-38
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 482 IEFRDVNFSYIDKHTK-RIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGA 540
I+ ++ + + +N++ +PAG+ ++G SG+GKST+IR + P G+
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 541 IYIDGKNINDV---DLDSLRRHIAIVPQDPVLF-HDTILYNINYG------DKSKSYEET 590
+ +DG+ + + +L RR I ++ Q L T+ N+ K +
Sbjct: 62 VLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRV 121
Query: 591 IEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSS 650
E L L + +P++ LSGG+KQRVAIARA+ N +L+ DEATS+
Sbjct: 122 TELLSLVGLGDKHDSYPSN-----------LSGGQKQRVAIARALASNPKVLLCDEATSA 170
Query: 651 LDSITENNILSSLKTASR--NKTTICIAHRLSTIKHL 685
LD T +IL LK +R T + I H + +K +
Sbjct: 171 LDPATTRSILELLKDINRRLGLTILLITHEMDVVKRI 207
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 138 bits (349), Expect = 1e-37
Identities = 46/213 (21%), Positives = 85/213 (39%), Gaps = 27/213 (12%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
++ +DV S L+ + AG+ + +VG +G+GKST++ + G+I
Sbjct: 4 MQLQDVAESTR-------LGPLSGEVRAGEILHLVGPNGAGKSTLLARMAG-MTSGKGSI 55
Query: 542 YIDGKNINDVDLDSLRRHIAIVPQDP-VLFHDTILYNINYGDKSKSYEETIEAAKLADLH 600
G+ + L H A + Q F + + + K+ E + A
Sbjct: 56 QFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGA--- 112
Query: 601 NSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTP-------ILVFDEATSSLDS 653
+ ++G +LSGGE QRV +A +L+ TP +L+ DE +SLD
Sbjct: 113 -------LALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDV 165
Query: 654 ITENNILSSLKT-ASRNKTTICIAHRLSTIKHL 685
++ + L + + +H L+
Sbjct: 166 AQQSALDKILSALCQQGLAIVMSSHDLNHTLRH 198
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 138 bits (349), Expect = 2e-37
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
+ D++ Y + ++ AG ++I+G SGSGKST +R + +P+ GAI
Sbjct: 3 LHVIDLHKRYGGHE---VLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAI 59
Query: 542 YIDGKNINDV-------------DLDSLRRHIAIVPQDPVLF-HDTILYNINYG------ 581
++G+NIN V L LR + +V Q L+ H T+L N+
Sbjct: 60 IVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLG 119
Query: 582 -DKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTP 640
K + E ++ + + Y LSGG++QRV+IARA+
Sbjct: 120 LSKHDARERALKYLAKVGIDE---RAQGKYPVH-------LSGGQQQRVSIARALAMEPD 169
Query: 641 ILVFDEATSSLDSITENNILSSLKTASR-NKTTICIAHRLSTIKHL 685
+L+FDE TS+LD +L ++ + KT + + H + +H+
Sbjct: 170 VLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV 215
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 135 bits (341), Expect = 5e-37
Identities = 40/204 (19%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 480 ASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAG 539
+ +E RD++ Y K + + TI G V G +G GK+T+++ + + +P G
Sbjct: 1 SKLEIRDLSVGY----DKPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKG 56
Query: 540 AIYIDGKNINDVDLDSLRRHIAIVPQDPVLFH-----DTILYNINYGDKSKSYEETIEAA 594
I +G + ++ I +P++ ++ D + + + E ++A
Sbjct: 57 EIIYNGV-----PITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDAL 111
Query: 595 KLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDSI 654
+ ++ + + ++ +LS G +RV +A +L N I V D+ ++D
Sbjct: 112 ESVEVLD------------LKKKLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDED 159
Query: 655 TENNILSSLKTASRNKTTICIAHR 678
+++ +L S+ + K + I+ R
Sbjct: 160 SKHKVLKSILEILKEKGIVIISSR 183
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 123 bits (309), Expect = 3e-32
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 480 ASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAG 539
A + DV + + ++ + G+ + ++G SG GK+T +R++ EP+ G
Sbjct: 2 AGVRLVDVWKVFGEVT---AVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRG 58
Query: 540 AIYIDGKNINDVDLDSLRR----HIAIVPQDPVLFHDTILYNINYG-------DKSKSYE 588
IYI K + D + IA+V Q L+ +Y+ + + +
Sbjct: 59 QIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQ 118
Query: 589 ETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEAT 648
E A+L L + + P LSGG++QRVA+ RAI++ + + DE
Sbjct: 119 RVREVAELLGLTELLNRKPRE-----------LSGGQRQRVALGRAIVRKPQVFLMDEPL 167
Query: 649 SSLDSITENNILSSLKT--ASRNKTTICIAHRLSTIKHL 685
S+LD+ + + LK TTI + H +
Sbjct: 168 SNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTM 206
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 118 bits (297), Expect = 1e-30
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
++ ++V ++ + + ++N I G+ V VG SG GKST++R++ +G +
Sbjct: 1 VQLQNVTKAWGEVV---VSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 57
Query: 542 YIDGKNINDVDLDSLRRHIAIVPQDPVLFHDTILY-NINYG------DKSKSYEETIEAA 594
+I K +N D R + +V Q L+ + N+++G K + + A
Sbjct: 58 FIGEKRMN--DTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVA 115
Query: 595 KLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDSI 654
++ L + + + P LSGG++QRVAI R ++ + + DE S+LD+
Sbjct: 116 EVLQLAHLLDRKPK-----------ALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAA 164
Query: 655 TENNI--LSSLKTASRNKTTICIAHRLSTIKHL 685
+ S +T I + H L
Sbjct: 165 LRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTL 197
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 117 bits (294), Expect = 4e-30
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
+ ++ + + ++ ++ G I+G +GSGKST+I ++ F + + G +
Sbjct: 5 LRTENIVKYFGEFK---ALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRV 61
Query: 542 YIDGKNI-NDVDLDSLRRHIAIVPQDPVLF-HDTILYNINYGD------------KSKSY 587
Y + K+I N + I Q P T+L N+ G+ K
Sbjct: 62 YFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWI 121
Query: 588 EETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEA 647
+ E + A +K + Y+ + GE LSGG+ + V I RA++ N ++V DE
Sbjct: 122 PKEEEMVEKAFKILEFLKLSHLYDRKAGE----LSGGQMKLVEIGRALMTNPKMIVMDEP 177
Query: 648 TSSLDSITENNILSSLKT-ASRNKTTICIAHRLSTIKHL 685
+ + ++I + + ++ T + I HRL + +
Sbjct: 178 IAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNY 216
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 115 bits (290), Expect = 1e-29
Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 481 SIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGA 540
++ +D+ K I ++F I G+ ++G +G+GK+T +R++ +P++G
Sbjct: 2 AVVVKDLRKRIGKKE---ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGI 58
Query: 541 IYIDGKNINDVDLDSLRRHIAIVPQDPVLFHD-TILYNINYG------DKSKSYEETIEA 593
+ + GKN+ + + +R+ I+ +P++ + + + + + S+ E A
Sbjct: 59 VTVFGKNVVE-EPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERA 117
Query: 594 AKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDS 653
++A L I + S G +++ IARA++ N + + DE TS LD
Sbjct: 118 TEIAGLGEKIKDRVST-----------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDV 166
Query: 654 ITENNILSSLKTASRNKTTICI 675
+ + LK AS+ TI +
Sbjct: 167 LNAREVRKILKQASQEGLTILV 188
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 110 bits (275), Expect = 1e-27
Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 15/213 (7%)
Query: 478 SNASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPN 537
S+ +E + ++ Y H ++ +P G+ V ++G +G+GK+T + +
Sbjct: 3 SDIVLEVQSLHVYYGAIH---AIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQ 59
Query: 538 AGAIYIDGKNINDVD-LDSLRRHIAIVPQDPVLF-HDTILYNINYGDKSKSYEETIE--A 593
G I +G++I + R IA+VP+ +F T+ N+ G ++ +E I+
Sbjct: 60 KGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDL 119
Query: 594 AKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLD- 652
+ L + + LSGGE+Q +AI RA++ +L+ DE + L
Sbjct: 120 EWIFSLFPRLKERLKQLGGT-------LSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAP 172
Query: 653 SITENNILSSLKTASRNKTTICIAHRLSTIKHL 685
+ K T + + +
Sbjct: 173 ILVSEVFEVIQKINQEGTTILLVEQNALGALKV 205
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 109 bits (272), Expect = 3e-27
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 480 ASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAG 539
I ++V+ + K N+N I G+ I+G SG+GK+T +R++ P+ G
Sbjct: 2 VRIIVKNVSKVF-KKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTG 60
Query: 540 AIYIDGKNINDVDLDSLR---RHIAIVPQDPVLFHD-TILYNINYG------DKSKSYEE 589
+Y D + + + R I +V Q L+ + T NI + K + +
Sbjct: 61 ELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKR 120
Query: 590 TIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATS 649
E AK+ D+H+ + +P LSG ++QRVA+ARA++K+ +L+ DE S
Sbjct: 121 VEEVAKILDIHHVLNHFPRE-----------LSGAQQQRVALARALVKDPSLLLLDEPFS 169
Query: 650 SLDSITENNILSSLKT--ASRNKTTICIAHRLSTIKHL 685
+LD+ ++ + +K + T + ++H + I +
Sbjct: 170 NLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAI 207
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 107 bits (268), Expect = 7e-27
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
IE ++ + + NL+ + +G+ I+G +G+GK+ + L+ F P++G I
Sbjct: 2 IEIESLSRKWKNFSLD----NLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRI 57
Query: 542 YIDGKNINDVDLDSLRRHIAIVPQDPVLFHD-TILYNINYG---DKSKSYEETIEAAKLA 597
+DGK++ DL + IA V Q+ LF + N+ +G K K + ++ A+
Sbjct: 58 LLDGKDVT--DLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDL 115
Query: 598 DLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDSITEN 657
+ + + + P LSGGE+QRVA+ARA++ N IL+ DE S+LD T+
Sbjct: 116 KIEHLLDRNPLT-----------LSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQE 164
Query: 658 NI--LSSLKTASRNKTTICIAHRLSTIKHL 685
N + S+ T + I H + + +
Sbjct: 165 NAREMLSVLHKKNKLTVLHITHDQTEARIM 194
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 100 bits (251), Expect = 1e-24
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 13/187 (6%)
Query: 502 NLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIA 561
N++F + ++G +G+GKS + L+ +P+ G + ++G +I L RR I
Sbjct: 17 NVDFEMG-RDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADIT--PLPPERRGIG 73
Query: 562 IVPQDPVLFHD-TILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLK 620
VPQD LF ++ NI YG ++ E + I + +
Sbjct: 74 FVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPAR------- 126
Query: 621 LSGGEKQRVAIARAILKNTPILVFDEATSSLDSITENNI--LSSLKTASRNKTTICIAHR 678
LSGGE+QRVA+ARA++ +L+ DE S++D T+ + + + + H
Sbjct: 127 LSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHD 186
Query: 679 LSTIKHL 685
L L
Sbjct: 187 LIEAAML 193
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 76.2 bits (186), Expect = 2e-16
Identities = 17/173 (9%), Positives = 37/173 (21%), Gaps = 29/173 (16%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHD 572
+ I G G GK+T+++ + A + + + + R I + +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62
Query: 573 TILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIA 632
G V + + A
Sbjct: 63 FFTSKKLVGS-----------------------------YGVNVQYFEELAIPILERAYR 93
Query: 633 RAILKNTPILVFDEATSSLDSITENNILSSLKTASRNKTTICIAHRLSTIKHL 685
A +++ DE + L N + +
Sbjct: 94 EAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLV 146
>d2hyda2 f.37.1.1 (A:1-323) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 323
Score = 53.4 bits (126), Expect = 4e-08
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 399 MTLSMIFAAREIAHGNLTVGDLVMVNGLLFQLSMPLGFLGSVYREVRQAFIDMQTMFTLM 458
+ + A G++TVG L G L L PL L + + + Q+F M +F L+
Sbjct: 259 PIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLI 318
Query: 459 LKEP 462
++
Sbjct: 319 DEDY 322
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter
MsbA, N-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 319
Score = 52.2 bits (123), Expect = 1e-07
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 399 MTLSMIFAAREIAHGNLTVGDLVMVNGLLFQLSMPLGFLGSVYREVRQAFIDMQTMFTLM 458
+ + A+ +LT G + +V + L PL L +V + ++ QT+F ++
Sbjct: 254 LAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAIL 313
Query: 459 LKEP 462
E
Sbjct: 314 DSEQ 317
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 47.7 bits (112), Expect = 1e-06
Identities = 13/151 (8%), Positives = 37/151 (24%), Gaps = 5/151 (3%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLF 570
+ V + G G GK+T+I + + + + + +
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61
Query: 571 HDTILYNINYGDKSKSYEETIEAAKLADLHNSIIK-----WPNHYETQVGERGLKLSGGE 625
L + + + ++ L +++ V + K+
Sbjct: 62 SRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFS 121
Query: 626 KQRVAIARAILKNTPILVFDEATSSLDSITE 656
+ + R L ++
Sbjct: 122 QLFIQAVRQTLSTPGTIILGTIPVPKGKPLA 152
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 49.1 bits (115), Expect = 1e-06
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 623 GGEKQRV------AIARAILKNTPILVFDEATSSLDSITENNILSSLKT-ASRNKTTICI 675
GGE+ + A++ + +L+ DE T LD +++ ++ + I +
Sbjct: 281 GGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILV 340
Query: 676 AHRLSTIKH 684
+H
Sbjct: 341 SHDEELKDA 349
Score = 31.7 bits (70), Expect = 0.34
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 498 RIFSNLNFTIPAGKSVAIVGGSGSGKSTII 527
R S+ G ++ I+G +GSGKS+++
Sbjct: 12 RSHSDTVVEFKEGINL-IIGQNGSGKSSLL 40
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 43.0 bits (100), Expect = 3e-05
Identities = 19/109 (17%), Positives = 29/109 (26%), Gaps = 10/109 (9%)
Query: 509 AGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPV 568
G + + G GSGKSTI L P ++ D L +I DP
Sbjct: 3 GGNILLLSGHPGSGKSTIAEALAN--LPGVPKVHFHS--------DDLWGYIKHGRIDPW 52
Query: 569 LFHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGER 617
L + + + L + T +
Sbjct: 53 LPQSHQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARP 101
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 43.6 bits (101), Expect = 6e-05
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 623 GGEKQRV------AIARAILKNTPILVFDEATSSLDSITENNILSSLKT-ASRNKTTICI 675
GGE+ + A++ + +L+ DE T LD +++ ++ + I +
Sbjct: 204 GGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILV 263
Query: 676 AHRLSTIKH 684
+H
Sbjct: 264 SHDEELKDA 272
Score = 39.7 bits (91), Expect = 0.001
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 498 RIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYR 532
R S+ G I+G +GSGKS+++ +
Sbjct: 12 RSHSDTVVEFKEG-INLIIGQNGSGKSSLLDAILV 45
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 42.0 bits (97), Expect = 2e-04
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 622 SGGEKQRVAI----ARAILKNTPILVFDEATSSLDSITENNILSSL-KTASRNKTTICIA 676
SGGEK A+ A + +P V DE ++LD I + + + + + I I+
Sbjct: 334 SGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVIS 393
Query: 677 HRLSTIK---HLLG-YKAHRKTSTNLV 699
+ + + L+G Y+ ++ S+ ++
Sbjct: 394 LKNTMFEKSDALVGVYRQQQENSSKII 420
Score = 31.2 bits (69), Expect = 0.49
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 488 NF-SYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTII 527
NF SY + NFT +I+G +GSGKS ++
Sbjct: 10 NFKSYRGVTKVGFGES-NFT-------SIIGPNGSGKSNMM 42
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 39.6 bits (91), Expect = 5e-04
Identities = 18/190 (9%), Positives = 44/190 (23%), Gaps = 37/190 (19%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFE-------------PNAGAIYIDGKNINDVDLDSL- 556
K V + G G G +T +L + + + +
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMD 61
Query: 557 -----------RRHIAIVPQDPVLFHDTILYNINYGDKSKSYEETIEA-----------A 594
R IA + ++ + DT +
Sbjct: 62 PETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVVET 121
Query: 595 KLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIARAILKNTPILVFDEATSSLDSI 654
++ + ++ + A++ +L + + LD
Sbjct: 122 TGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLDQA 181
Query: 655 TENNILSSLK 664
E + + L+
Sbjct: 182 VE-ELTNVLR 190
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/194 (13%), Positives = 45/194 (23%), Gaps = 41/194 (21%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFF------------------EPNAGAIYIDGKNINDV- 551
K + G G GKST++ + D + +
Sbjct: 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLS 61
Query: 552 ------DLDSLRRHI---AIVPQDPVLFHDTILYNINYGDKSKSYEETIEA--------- 593
+ I A + LF DT +
Sbjct: 62 VEKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFL 121
Query: 594 --AKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQR-VAIARAILKNTPILVFDEATSS 650
A + + + + + L R A A A+L + + V
Sbjct: 122 LEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVNVEGD 181
Query: 651 LDSITENNILSSLK 664
N I+ S+K
Sbjct: 182 PSIAA-NEIIRSMK 194
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 37.6 bits (86), Expect = 0.004
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
GK + I G +GK+T +LY+ +PN +
Sbjct: 3 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLL 34
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 37.2 bits (85), Expect = 0.004
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHI 560
+ + GG+ SGKS++ + + + K + + DS R +
Sbjct: 5 IGVSGGTASGKSSVCAKIVQLL--GQNEVDYRQKQVVILSQDSFYRVL 50
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 36.9 bits (84), Expect = 0.004
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 509 AGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYID 544
+ + + GGS +GKS I+R L A +D
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVD 37
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 35.8 bits (81), Expect = 0.009
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFF 534
K+VAI+GG SGKS ++ L F
Sbjct: 8 KTVAILGGESSGKSVLVNKLAAVF 31
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 35.8 bits (81), Expect = 0.012
Identities = 11/65 (16%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHD 572
V I G GSGK+T + ++ + + + +V+ +L + P+ +
Sbjct: 12 VLIEGNIGSGKTTYLNHFEKYK-NDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQ 70
Query: 573 TILYN 577
+ +
Sbjct: 71 SYVTL 75
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 35.7 bits (81), Expect = 0.014
Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 9/90 (10%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHD 572
+ +VG GK+ I + L R+ G + ++ RR +V
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLNFI-------GVPTREFNVGQYRRD--MVKTYKSFEFF 55
Query: 573 TILYNINYGDKSKSYEETIEAAKLADLHNS 602
+ + + +
Sbjct: 56 LPDNEEGLKIRKQCALAALNDVRKFLSEEG 85
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 35.8 bits (82), Expect = 0.016
Identities = 22/201 (10%), Positives = 55/201 (27%), Gaps = 24/201 (11%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHD 572
++I G GKST R+L R + ++ D L +
Sbjct: 83 ISIAGSVAVGKSTTARVLQALLSRWPEH-----------------RRVELITTDGFLHPN 125
Query: 573 TILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIA 632
+L K K + E+ + +L + + + V + +
Sbjct: 126 QVLKERG-LMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLI------YDVIPDG 178
Query: 633 RAILKNTPILVFDEATSSLDSITENNILSSLKTASRNKTTICIAHRLSTIKHLLGYKAHR 692
+ IL+ + + + + + +I + ++ + +
Sbjct: 179 DKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLK 238
Query: 693 KTSTNLVRGNSSAMRSMSLSR 713
+S L++
Sbjct: 239 FREGAFTDPDSYFHNYAKLTK 259
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 35.0 bits (79), Expect = 0.018
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 508 PAGKSVAIVGGSGSGKSTIIRLL 530
P G ++ I G G+GK+++ ++
Sbjct: 3 PKGINILITGTPGTGKTSMAEMI 25
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 35.4 bits (80), Expect = 0.018
Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 5/105 (4%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVL 569
K ++I G +GKST + +L + E + + +V + Q
Sbjct: 2 IKKISIEGNIAAGKSTFVNILKQLCE-DWEVVPEPVARWCNVQSTQDEFEELTMSQKN-- 58
Query: 570 FHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQV 614
+ + Y + A L+ + + +
Sbjct: 59 --GGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAE 101
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 35.7 bits (81), Expect = 0.020
Identities = 27/162 (16%), Positives = 58/162 (35%), Gaps = 8/162 (4%)
Query: 513 VAIVGGSGSGKSTIIR-LLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFH 571
+ + G +G+GKS ++R L Y + +D + + + I + P D
Sbjct: 53 LLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNG-DMLSKFGRDKDIILNPYDQRTKG 111
Query: 572 DTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAI 631
+ I + Y ++ + +W ++ + E KL+ +
Sbjct: 112 WSFFNEIRNDYDWQRYALSVVP---RGKTDEAEEWASYGRLLLRETAKKLALIGTPSM-- 166
Query: 632 ARAILKNTPILVFDEATSSLDSITENNILSSLKTASRNKTTI 673
R + T I FD+ L+ ++ + AS+ T+
Sbjct: 167 -RELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSA 207
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 34.7 bits (78), Expect = 0.021
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYR 532
+++ +VG G+GKSTI R L +
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLAQ 24
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 34.9 bits (79), Expect = 0.025
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFFE 535
G + + G +GKST R L
Sbjct: 3 GALIVLEGVDRAGKSTQSRKLVEALC 28
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 35.0 bits (79), Expect = 0.026
Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 513 VAIVGGSGSGKSTIIRLL---YRFFEPNAGAIY---IDGKNINDVDLDSLRRHIAIVPQD 566
+AI G + SGKST+ +++ + F + GA+Y N + ++ + +A++ Q
Sbjct: 6 IAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQH 65
Query: 567 PVLFHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYE 611
P+ F + + I ++ + ++I P E
Sbjct: 66 PISFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVRE 110
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 34.7 bits (78), Expect = 0.026
Identities = 9/46 (19%), Positives = 19/46 (41%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRR 558
+ I G S SGK+T+ L + ++ + + + V+
Sbjct: 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYH 70
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 34.2 bits (77), Expect = 0.030
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAI 541
G+ V + G S GKST++R L ++
Sbjct: 2 GRVVVLSGPSAVGKSTVVRCLRERIPNLHFSV 33
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 34.1 bits (77), Expect = 0.035
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFFE 535
K + I G G+GK+T ++ E
Sbjct: 2 SKYIVIEGLEGAGKTTARNVVVETLE 27
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 34.5 bits (79), Expect = 0.039
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPN 537
+++ G SG+G ST+ + F
Sbjct: 7 ISVTGSSGAGTSTVKHTFDQIFRRE 31
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 33.4 bits (75), Expect = 0.047
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 511 KSVAIVGGSGSGKSTIIRLL 530
K++ +G GSGKST+ R L
Sbjct: 1 KNIVFIGFMGSGKSTLARAL 20
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 33.4 bits (75), Expect = 0.051
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 511 KSVAIVGGSGSGKSTIIRLL-----YRFFEPNAGAIYIDGKNIN 549
+ + +VG G G +T+ R L Y F + + + G +
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVA 46
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 33.5 bits (75), Expect = 0.072
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFE 535
+AI G G+GK T++ L F
Sbjct: 3 IAIEGVDGAGKRTLVEKLSGAFR 25
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 32.8 bits (73), Expect = 0.078
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYID 544
K + +G GSGKST R F N G I+
Sbjct: 3 KIILTIGCPGSGKSTWAR---EFIAKNPGFYNIN 33
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 32.7 bits (73), Expect = 0.087
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLF 570
K I G +G GKST + L + + YI+G IN + + R + +
Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLD---NSAYIEGDIINHMVVGGYRPPWESDELLALTW 59
Query: 571 HDTILYNINYGDKSKSY 587
+ +N+
Sbjct: 60 KNITDLTVNFLLAQNDV 76
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 32.7 bits (74), Expect = 0.15
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 507 IPAGKSVAIVGGSGSGKSTIIRLLYRFFE 535
+P V I G G GK+T +LL
Sbjct: 1 MPTLLRVYIDGPHGMGKTTTTQLLVALGS 29
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 32.0 bits (71), Expect = 0.20
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 513 VAIVGGSGSGKSTIIRLL---YRFFEPNAGAIY 542
+ I G SG+GK T+ + + ++ ++GAIY
Sbjct: 6 ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIY 38
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 31.6 bits (70), Expect = 0.22
Identities = 9/40 (22%), Positives = 12/40 (30%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNIN 549
G ++ + G SGK I R L G
Sbjct: 6 GFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDT 45
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 31.3 bits (70), Expect = 0.23
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAI 562
+ ++G +G GK+ ++ R F P GA I V+++ + + I
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 58
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 31.8 bits (71), Expect = 0.23
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
+ I G GSGKST+ LL
Sbjct: 6 IGITGNIGSGKSTVAALL 23
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 31.5 bits (70), Expect = 0.26
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 511 KSVAIVGGSGSGKSTII-RLLYRFFEPN 537
++V VG SGK+ + RLL +
Sbjct: 1 RAVLFVGLCDSGKTLLFVRLLTGQYRDT 28
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 31.4 bits (70), Expect = 0.27
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 505 FTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVP 564
P + V VG G+GKST I+ +AG ++++ + A+
Sbjct: 9 LLSPNPEVVVAVGFPGAGKSTFIQEHLV----SAGYVHVNRDTLGSWQRCVSSCQAALRQ 64
Query: 565 QDPVLFHDTILYN 577
V+ +T
Sbjct: 65 GKRVVIDNTNPDV 77
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 31.9 bits (72), Expect = 0.30
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYI 543
+ + G G GKST R++ + +Y
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 31.1 bits (69), Expect = 0.30
Identities = 16/147 (10%), Positives = 42/147 (28%), Gaps = 15/147 (10%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYI---DGKNINDVDLDSLRRHIAIVPQDPVL 569
+A SG+GK+T+++ L + +++ + +
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 570 F-----------HDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERG 618
S+ ++ + + I + G R
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRP 124
Query: 619 LKLSGGEKQRVAIARAILKNTPILVFD 645
+L ++ +A+A + N + + D
Sbjct: 125 EELV-IDRHVIAVASDVPLNLDVALLD 150
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 31.5 bits (70), Expect = 0.31
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFE 535
+ ++I G GKST ++LL + +
Sbjct: 3 RRLSIEGNIAVGKSTFVKLLTKTYP 27
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 31.0 bits (69), Expect = 0.31
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAI 562
V ++G SG GKS ++ R F + + + +D I
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 57
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 31.3 bits (70), Expect = 0.38
Identities = 15/65 (23%), Positives = 21/65 (32%), Gaps = 15/65 (23%)
Query: 490 SYIDKHTKRIFSNLNFTIPAGKS---VAIVGGSGSGKSTIIRLLYR------FFEPNAGA 540
++DK+ F K + G GSGKS +Y E + G
Sbjct: 10 EFLDKYIPEWFET------GNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGY 63
Query: 541 IYIDG 545
ID
Sbjct: 64 ASIDD 68
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 30.8 bits (68), Expect = 0.39
Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 513 VAIVGGSGSGKSTIIRLLY-RFFEPNAGAIYIDGKNIND 550
++G SGSGKS + + + ++ + +
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIE 47
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 30.7 bits (69), Expect = 0.40
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 510 GKSVAIVGGSGSGKSTI-IRLLYRFFEP 536
G V + G SG GKS + L+ +
Sbjct: 15 GVGVLLTGRSGIGKSECALDLINKNHLF 42
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 31.0 bits (69), Expect = 0.40
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 510 GKSVAIVGGSGSGKSTIIRLL 530
G + SG+GKS++I+ L
Sbjct: 2 GTLYIVSAPSGAGKSSLIQAL 22
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 31.1 bits (70), Expect = 0.40
Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 13/99 (13%)
Query: 512 SVAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLF 570
+V ++G SGKST L+Y I+ ++ + A + + +
Sbjct: 8 NVVVIGHVDSGKSTTTGHLIY------------KCGGIDKRTIEKFEKEAAELGKGSFKY 55
Query: 571 HDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNH 609
+ ++ + + + + ++I P H
Sbjct: 56 AWVLDKLKAERERGITIDIALWKFETPKYQVTVIDAPGH 94
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 31.0 bits (69), Expect = 0.40
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 510 GKSVAIVGGSGSGKSTIIRLL 530
K++ ++G G G+ I L
Sbjct: 3 RKTLVLLGAHGVGRRHIKNTL 23
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 30.8 bits (68), Expect = 0.44
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +VGG G GKS + + + +F +
Sbjct: 9 LVVVGGGGVGKSALTIQFIQSYFVSD 34
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 30.7 bits (68), Expect = 0.45
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Query: 513 VAIVGGSGSGKSTIIRLL-----YRFFEPNAGAIYIDGKNIN 549
+VG GSGKSTI R L + + G++I
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIA 45
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 30.7 bits (68), Expect = 0.46
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 509 AGKS----VAIVGGSGSGKSTII-RLLYRFFEPN 537
AGKS V ++G G GKS+++ R + F+
Sbjct: 1 AGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQ 34
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 30.6 bits (68), Expect = 0.49
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
V + GG GSGK+TI L
Sbjct: 5 VGLTGGIGSGKTTIANLF 22
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 30.6 bits (68), Expect = 0.50
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAI 562
+ I+G SG GKS+++ R F+P A + + +D + +AI
Sbjct: 10 ILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 60
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 31.2 bits (69), Expect = 0.55
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 10/41 (24%)
Query: 488 NF-SYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTII 527
F S+ + AIVG +GSGKS II
Sbjct: 10 GFKSFGRPSLIGFSDRVT---------AIVGPNGSGKSNII 41
Score = 30.0 bits (66), Expect = 1.2
Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Query: 638 NTPILVFDEATSSLDSITENNILSSLKTASRNKTTICIAHRLSTIK---HLLGYKAHRKT 694
+P V DE S LD LK S++ I I H ++ L G
Sbjct: 241 PSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLHGVTMVNGV 300
Query: 695 ST 696
S
Sbjct: 301 SA 302
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 30.3 bits (67), Expect = 0.56
Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 12/78 (15%)
Query: 513 VAIVGGSGSGKSTIIRLL------------YRFFEPNAGAIYIDGKNINDVDLDSLRRHI 560
+ + G G GK+T+ + L E Y + + +D D + +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 66
Query: 561 AIVPQDPVLFHDTILYNI 578
++ + D +
Sbjct: 67 DNQMREGGVIVDYHGCDF 84
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 30.5 bits (67), Expect = 0.56
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYID 544
V ++G G GKS + R+ +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGH 35
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 30.3 bits (68), Expect = 0.59
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 510 GKSVAIVGGSGSGKSTI-IRLLYR 532
G V I G SG GKS + L+ R
Sbjct: 14 GLGVLITGDSGVGKSETALELVQR 37
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 30.4 bits (67), Expect = 0.60
Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 3/95 (3%)
Query: 512 SVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFH 571
S+ I G SGK++ LL + + + ++ D D + P L +
Sbjct: 5 SIIIAGPQNSGKTS---LLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDFPGHVKLRY 61
Query: 572 DTILYNINYGDKSKSYEETIEAAKLADLHNSIIKW 606
Y K +++ + ++
Sbjct: 62 KLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEF 96
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 30.3 bits (68), Expect = 0.60
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYR 532
G V I G SG GKS L +
Sbjct: 15 GVGVLITGDSGIGKSETALELIK 37
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.4 bits (67), Expect = 0.62
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFF 534
G +V + G SG+GK+T+ L +
Sbjct: 19 GCTVWLTGLSGAGKTTVSMALEEYL 43
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 30.3 bits (67), Expect = 0.66
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
V + G SG+GKST+++ L
Sbjct: 3 VVLSGPSGAGKSTLLKKL 20
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 30.3 bits (67), Expect = 0.67
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
+ I G SG+GKST+++ L
Sbjct: 4 IVISGPSGTGKSTLLKKL 21
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.5 bits (67), Expect = 0.69
Identities = 13/108 (12%), Positives = 28/108 (25%), Gaps = 1/108 (0%)
Query: 510 GKSVAIVGGSGSGKSTIIR-LLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPV 568
++G +GKS+II+ + P + N + + V
Sbjct: 29 APITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQKEINKLV 88
Query: 569 LFHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGE 616
++L + I+ S +E +
Sbjct: 89 KRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKD 136
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 30.0 bits (66), Expect = 0.70
Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ ++G + SGKS++I R L ++
Sbjct: 8 LGVLGDARSGKSSLIHRFLTGSYQVL 33
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 30.1 bits (66), Expect = 0.71
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
VAIVG GKST++ L
Sbjct: 8 VAIVGKPNVGKSTLLNNL 25
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 30.2 bits (67), Expect = 0.71
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
VA+ GG GSGKST+
Sbjct: 6 VALTGGIGSGKSTVANAF 23
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 29.9 bits (66), Expect = 0.72
Identities = 7/51 (13%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAI 562
++G +G+GKS ++ + + + F+ ++ +++ + I
Sbjct: 8 FLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI 58
>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde
dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
Length = 154
Score = 29.8 bits (66), Expect = 0.77
Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 510 GKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVL 569
G +VA+VG +G+ + +I++L P Y+ L + I I
Sbjct: 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETA 60
Query: 570 FH--DTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQ 627
F D L++ +K ++A + + S + V E
Sbjct: 61 FEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNG 120
Query: 628 RVAIA 632
+A
Sbjct: 121 IIACP 125
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 30.1 bits (66), Expect = 0.78
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 512 SVAIVGGSGSGKSTIIRLL 530
++ G S GKST+I L
Sbjct: 2 TIIFAGRSNVGKSTLIYRL 20
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 30.0 bits (66), Expect = 0.89
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 498 RIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLR 557
F F + + + GG+G+GKST + P+ ++ S
Sbjct: 13 NGFFARTFDLDELVTT-LSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRD 71
Query: 558 RHI 560
+ +
Sbjct: 72 KGL 74
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 29.7 bits (65), Expect = 0.95
Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
V I+G SG GK++++ + + + F
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQ 30
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 30.3 bits (67), Expect = 0.98
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 488 NF-SYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTII 527
F SY +K FS FT AIVG +GSGKS I
Sbjct: 11 GFKSYGNKKVVIPFSK-GFT-------AIVGANGSGKSNIG 43
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 29.6 bits (65), Expect = 0.99
Identities = 5/24 (20%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFE 535
+ ++G +GK+TI+ + +
Sbjct: 5 LLMLGLDNAGKTTILKKFNGEDVD 28
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 29.9 bits (66), Expect = 1.0
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYID 544
K + + G SGK T F N A+
Sbjct: 2 KLIFLSGVKRSGKDTTA----DFIMSNYSAVKYQ 31
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 30.1 bits (66), Expect = 1.1
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 507 IPAGKSVAIVGGSGSGKSTI 526
+ G + G +GKS +
Sbjct: 31 VETGSITELFGEFRTGKSQL 50
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 29.2 bits (64), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
V ++G +G GKS+I+ R + F+PN
Sbjct: 7 VCLLGDTGVGKSSIMWRFVEDSFDPN 32
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 29.6 bits (65), Expect = 1.1
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
V +VG +GKS+++ +
Sbjct: 4 VGLVGYPNAGKSSLLAAM 21
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 29.3 bits (64), Expect = 1.1
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +VG GKS++I R F +
Sbjct: 5 MVVVGNGAVGKSSMIQRYCKGIFTKD 30
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.2 bits (64), Expect = 1.2
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +VGG G GKS + + + +F +
Sbjct: 8 LVVVGGGGVGKSALTIQFIQSYFVTD 33
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 29.2 bits (64), Expect = 1.2
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 497 KRIFSNLNFTIPAGKSVAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNIN 549
+IF N I ++G +GK+TI+ +L + + + +
Sbjct: 5 SKIFGNKEMRI------LMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVT 52
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 29.8 bits (66), Expect = 1.2
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 493 DKHTKRIFSNL-NFTIPAGKSVAIVGGSGSGKSTIIRLLYR 532
+ H R+ L + + G +GSGKS I
Sbjct: 26 EYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALS 66
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 29.3 bits (64), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 510 GKSVAIVGGSGSGKSTIIRLL 530
G V I G +GKS+++ L
Sbjct: 1 GMKVVIAGRPNAGKSSLLNAL 21
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 29.7 bits (67), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 496 TKRIFSNLNFTIPAGKSVAIVGGSGSGKSTII 527
T +L G + + GG+G GK+ +I
Sbjct: 54 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI 85
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 29.2 bits (64), Expect = 1.3
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 507 IPAGKSVAIVGGSGSGKSTII-RLLYRFFEPN 537
+P K + +VG G GKS + + + F P+
Sbjct: 2 LPTYK-LVVVGDGGVGKSALTIQFFQKIFVPD 32
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.3 bits (64), Expect = 1.3
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 510 GKSVAIVGGSGSGKSTII-RLLYRFFE 535
GK + +G +GK+T++ L
Sbjct: 1 GK-LLFLGLDNAGKTTLLHMLKNDRLA 26
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 29.1 bits (64), Expect = 1.4
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ I+G S GK++ + R F P
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDSFTPA 33
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 29.2 bits (64), Expect = 1.4
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ ++G + GKS+I+ R + F N
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSNDFAEN 31
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.1 bits (64), Expect = 1.4
Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLD 554
I+G G GKS ++ + + F + +++
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVS 49
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 29.1 bits (64), Expect = 1.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 508 PAGKSVAIVGGSGSGKSTIIRLL 530
P G ++G G+GK T L
Sbjct: 1 PKGVRAVLLGPPGAGKGTQAPKL 23
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 29.1 bits (64), Expect = 1.4
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +G SG GK+T + R F P
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPK 33
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 28.9 bits (63), Expect = 1.5
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+AI+G GKS++ + + F +
Sbjct: 7 IAILGYRSVGKSSLTIQFVEGQFVDS 32
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 28.8 bits (63), Expect = 1.5
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +G GK+++I R +Y F+
Sbjct: 3 LVFLGEQSVGKTSLITRFMYDSFDNT 28
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 29.2 bits (64), Expect = 1.5
Identities = 5/26 (19%), Positives = 9/26 (34%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+VG GK+ ++ F
Sbjct: 8 CVVVGDGAVGKTCLLISYTTNAFPGE 33
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 28.9 bits (63), Expect = 1.6
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
V I+G SG GK++++ R + +
Sbjct: 5 VIILGDSGVGKTSLMHRYVNDKYSQQ 30
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 29.4 bits (66), Expect = 1.6
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 502 NLNFTIPAGKSVAIVGGSGSGKSTII 527
+ I G+ I+G +GK++I
Sbjct: 60 DSLVPIGRGQRELIIGDRQTGKTSIA 85
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 29.4 bits (64), Expect = 1.7
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 507 IPAGKSVAIVGGSGSGKSTI 526
I G + G +GK+ I
Sbjct: 20 IETGSITEMFGEFRTGKTQI 39
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 29.0 bits (63), Expect = 1.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
V IVG GKST+ L
Sbjct: 3 VLIVGRPNVGKSTLFNKL 20
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 28.7 bits (63), Expect = 1.7
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 12/59 (20%)
Query: 513 VAIVGGSGSGKSTIIRLL---------YRF--FEPNAG-AIYIDGKNINDVDLDSLRRH 559
V +VG GKST++ ++ Y F PN G DG++ DL L
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEG 62
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 28.8 bits (63), Expect = 1.7
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
VA+ G G GKS+++ R + F +
Sbjct: 5 VAVFGAGGVGKSSLVLRFVKGTFRES 30
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 29.0 bits (63), Expect = 1.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 513 VAIVGGSGSGKSTIIRLLYRF 533
+A+ G S GKS+ I L
Sbjct: 26 IALAGRSNVGKSSFINSLINR 46
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA,
N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 129
Score = 28.5 bits (63), Expect = 1.7
Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 19/127 (14%)
Query: 511 KSVAIVGGS---GSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDP 567
K +A++G S + + L + + + I + + V +
Sbjct: 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGV----------KAYKSV 58
Query: 568 VLFHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQ 627
D I I K + I+ + + + GE G + EK+
Sbjct: 59 KDIPDEIDLAIIVVPKRFVKDTLIQCGE---KGVKGVVIITAGFGETGEEGKRE---EKE 112
Query: 628 RVAIARA 634
V IA
Sbjct: 113 LVEIAHK 119
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 29.0 bits (64), Expect = 1.7
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 11/48 (22%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGA----------IYIDGKNIN 549
+ ++G SG GK+ ++ R F + I +DGK I
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIK 56
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 28.9 bits (63), Expect = 1.7
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +VG G+GK+T + R L FE
Sbjct: 6 LVLVGDGGTGKTTFVKRHLTGEFEKK 31
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.8 bits (63), Expect = 1.7
Identities = 8/44 (18%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 505 FTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNI 548
F+ + ++GG G+GK T L + + +++ ++
Sbjct: 3 FSPDQVSVIFVLGGPGAGKGTQCEKLVKDY----SFVHLSAGDL 42
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 28.9 bits (63), Expect = 1.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
+AIVG GKST++ L
Sbjct: 8 IAIVGRPNVGKSTLLNKL 25
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 29.2 bits (64), Expect = 1.8
Identities = 16/107 (14%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Query: 507 IPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQD 566
+P G+S + G SG+GK+ + + + + ++ D
Sbjct: 23 LPIGRSTLVSGTSGTGKTLF--SIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWD 80
Query: 567 PVLFHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQ 613
D I +E + L+ L I Y +
Sbjct: 81 LAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRAR 127
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 29.2 bits (64), Expect = 1.8
Identities = 17/108 (15%), Positives = 27/108 (25%), Gaps = 11/108 (10%)
Query: 507 IPAGKSVAIVGGSGSGKSTII-----------RLLYRFFEPNAGAIYIDGKNINDVDLDS 555
+ AG A+V G+GKS + LL P IY+ ++
Sbjct: 26 MVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHR 85
Query: 556 LRRHIAIVPQDPVLFHDTILYNINYGDKSKSYEETIEAAKLADLHNSI 603
L A + + L + L
Sbjct: 86 LHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGR 133
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 28.5 bits (62), Expect = 1.8
Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +VG SGK+T + + F +
Sbjct: 5 LTLVGLQYSGKTTFVNVIASGQFNED 30
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 28.7 bits (63), Expect = 1.8
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYI 543
V +VG SG GK+ ++ R F +
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDGAFLAGTFISTV 40
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 29.4 bits (64), Expect = 1.9
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 481 SIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGA 540
+ R+ +D N P ++G G+GK+ +R L+ ++ A
Sbjct: 17 RLPHREQQLQQLDILLGNWLRNPGHHYP---RATLLGRPGTGKTVTLRKLWELYKDKTTA 73
Query: 541 IYIDGKNINDVDLDSLRRHIAI 562
++ + ++ IA
Sbjct: 74 RFVYINGFIYRNFTAIIGEIAR 95
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 28.7 bits (63), Expect = 1.9
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
V ++G G GKS + + + F
Sbjct: 6 VVVLGSGGVGKSALTVQFVTGTFIEK 31
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 28.7 bits (63), Expect = 1.9
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFF 534
+VG SGK+T++
Sbjct: 2 NVWQVVGYKHSGKTTLMEKWVAAA 25
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 28.8 bits (63), Expect = 1.9
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +VG G GKS + +L+ F
Sbjct: 6 LVVVGAGGVGKSALTIQLIQNHFVDE 31
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 28.4 bits (62), Expect = 2.1
Identities = 6/26 (23%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ ++G G GKS + + + F
Sbjct: 6 LVVLGSGGVGKSALTVQFVQGIFVEK 31
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 28.5 bits (62), Expect = 2.2
Identities = 6/26 (23%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ ++G S GK+ + R F
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGRFPDR 30
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 28.6 bits (63), Expect = 2.2
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAI 562
+ ++G SG GKS ++ R + F P+ I VD++ + + I
Sbjct: 5 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQI 55
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 28.5 bits (62), Expect = 2.3
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ +VG S GK+ ++ F N
Sbjct: 5 IVVVGDSQCGKTALLHVFAKDCFPEN 30
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 29.2 bits (65), Expect = 2.3
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFE 535
+ + G G GK+T F
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFA 30
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 28.4 bits (62), Expect = 2.4
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
V +VG G GKS + + +Y F +
Sbjct: 7 VIMVGSGGVGKSALTLQFMYDEFVED 32
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 28.4 bits (62), Expect = 2.4
Identities = 5/26 (19%), Positives = 9/26 (34%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+VG GK+ ++ F
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPSE 31
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 27.4 bits (61), Expect = 2.5
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 588 EETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRV--AIA--RAILKNTPILV 643
E + +L N + QV E G KL +K + A+ LK
Sbjct: 18 EADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAA 77
Query: 644 FDEATSSLDSITE 656
+ L +++
Sbjct: 78 IEAKMQELAQVSQ 90
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 28.3 bits (62), Expect = 2.5
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
I+G +G GKS ++ + + F+P
Sbjct: 6 YIIIGDTGVGKSCLLLQFTDKRFQPV 31
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 28.1 bits (61), Expect = 2.5
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ I+G G+GK+TI+ RL
Sbjct: 8 ILILGLDGAGKTTILYRLQVGEVVTT 33
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 28.4 bits (62), Expect = 2.5
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+AI G +G GKS ++ R L + F
Sbjct: 5 LAIFGRAGVGKSALVVRFLTKRFIWE 30
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 28.7 bits (63), Expect = 2.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 508 PAGKSVAIVGGSGSGKSTIIRLL 530
P V + G G+GKST +R L
Sbjct: 26 PGIGGVLVFGDRGTGKSTAVRAL 48
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 28.8 bits (64), Expect = 2.6
Identities = 7/39 (17%), Positives = 16/39 (41%)
Query: 505 FTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYI 543
I G+ IV +GK+ +++ + + N +
Sbjct: 38 SPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVL 76
>d1vkna1 c.2.1.3 (A:1-144,A:308-339)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Thermotoga maritima [TaxId: 2336]}
Length = 176
Score = 28.3 bits (62), Expect = 2.7
Identities = 21/136 (15%), Positives = 34/136 (25%), Gaps = 16/136 (11%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNIND----VDLDSLRRHIAIVPQDPV 568
I+G +G ++RLL P A Y+ + S + + DP
Sbjct: 4 AGIIGATGYTGLELVRLLKNH--PEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE 61
Query: 569 LFHDTILYNINYGD--KSKSYEETIEAAKLADL--------HNSIIKWPNHYETQVGERG 618
S ++ K+ DL +W +
Sbjct: 62 KVSKNCDVLFTALPAGASYDLVRELKGVKIIDLGADFRFDDPGVYREWYGKELSGYENIK 121
Query: 619 LKLSGGEKQRVAIARA 634
E R I A
Sbjct: 122 RVYGLPELHREEIKNA 137
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 28.7 bits (63), Expect = 2.7
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 507 IPAGKSVAIVGGSGSGKSTI 526
+ G +G+GK+ +
Sbjct: 23 FFKDSIILATGATGTGKTLL 42
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 28.6 bits (62), Expect = 2.7
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 504 NFTIPAGKSVAIVGGSGS-GKSTIIRLL 530
N +P G V + G +G + +LL
Sbjct: 5 NAVLPEGSLVLVTGANGFVASHVVEQLL 32
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 28.1 bits (61), Expect = 2.7
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYID 544
+ +VG +GK+T +LY+
Sbjct: 3 ILMVGLDAAGKTT---ILYKLKLGEIVTTIPT 31
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 28.5 bits (62), Expect = 2.9
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 507 IPAGKSVAIVGGSGSGKSTI 526
I + G +GK+ +
Sbjct: 34 IESMAITEAFGEFRTGKTQL 53
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 28.4 bits (62), Expect = 2.9
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYID 544
V ++GG GSGK T + R F G +++
Sbjct: 7 NVVFVLGGPGSGKGTQCANIVRDF----GWVHLS 36
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 28.0 bits (61), Expect = 3.0
Identities = 6/26 (23%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
V ++G GK++++ R F
Sbjct: 6 VVLLGEGCVGKTSLVLRYCENKFNDK 31
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 28.5 bits (62), Expect = 3.0
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 507 IPAGKSVAIVGGSGSGKSTI 526
I + G GSGK+ +
Sbjct: 33 IETQAITEVFGEFGSGKTQL 52
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 27.9 bits (61), Expect = 3.1
Identities = 15/112 (13%), Positives = 29/112 (25%), Gaps = 10/112 (8%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNI---NDVDLDSLRRHIAIVPQDPVL 569
V ++G G+GK T L G I + N + L L
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKL----GIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDL 58
Query: 570 FHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKL 621
+ + + + D + ++ + RG +
Sbjct: 59 VPSDLTNEL---VDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDI 107
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 28.2 bits (61), Expect = 3.2
Identities = 7/26 (26%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
V ++G G GKST+ +
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMD 31
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 28.5 bits (62), Expect = 3.2
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 507 IPAGKSVAIVGGSGSGKSTI 526
+ + G GSGK+ I
Sbjct: 31 LESQSVTEFAGVFGSGKTQI 50
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 28.0 bits (61), Expect = 3.2
Identities = 8/71 (11%), Positives = 22/71 (30%), Gaps = 7/71 (9%)
Query: 513 VAIVGGSGSGKSTIIRLL---YRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVL 569
+ ++G +GK T + + Y + + G + + + L
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIM----DAGKL 58
Query: 570 FHDTILYNINY 580
D ++ +
Sbjct: 59 VTDELVIALVK 69
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 28.1 bits (61), Expect = 3.2
Identities = 6/26 (23%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ IVG GK+ ++ F
Sbjct: 5 LVIVGDGACGKTCLLIVNSKDQFPEV 30
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 28.1 bits (61), Expect = 3.3
Identities = 17/103 (16%), Positives = 31/103 (30%)
Query: 507 IPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQD 566
I VAIVG GKST+ + I ++ D ++ R V
Sbjct: 5 ITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTA 64
Query: 567 PVLFHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNH 609
+ + + ++IE A + + +
Sbjct: 65 GLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITR 107
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 28.4 bits (62), Expect = 3.4
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 511 KSVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDG 545
+ + G GSGK+++ ++ E I ID
Sbjct: 33 TAFLLGGQPGSGKTSLRSAIFE--ETQGNVIVIDN 65
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 28.1 bits (61), Expect = 3.4
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ ++G S GKS+++ R + F
Sbjct: 9 LVLLGESAVGKSSLVLRFVKGQFHEF 34
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 28.2 bits (61), Expect = 3.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 510 GKSVAIVGGSGSGKSTIIRLL 530
G VA G S +GKS+ + L
Sbjct: 16 GIEVAFAGRSNAGKSSALNTL 36
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 28.2 bits (62), Expect = 3.5
Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 12/132 (9%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFHD 572
+ ++G G GKS+ + + E + V + R + D +
Sbjct: 35 ILVMGKGGVGKSSTVNSI--IGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIE 92
Query: 573 TILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAIA 632
N + KS+ L + ++ + V + G
Sbjct: 93 GGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKG------- 145
Query: 633 RAILKNTPILVF 644
I I+
Sbjct: 146 --IWNKA-IVAL 154
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 27.9 bits (61), Expect = 3.8
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+ ++G SG GKS ++ R + +
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDDTYTND 34
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 28.0 bits (61), Expect = 3.8
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Query: 499 IFSNLNFTIPAGKS----VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYI-DGKNINDVDL 553
IFS++ F G + + I+G G+GK+T +LYR G N+ +
Sbjct: 3 IFSSM-FDKLWGSNKELRILILGLDGAGKTT---ILYRLQIGEVVTTKPTIGFNVETLSY 58
Query: 554 DSLRRHIAIVPQDPVLFHDTILYNIN 579
+L+ ++ + + Y +
Sbjct: 59 KNLKLNVWDLGGQTSIRPYWRCYYAD 84
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 28.0 bits (61), Expect = 3.9
Identities = 5/26 (19%), Positives = 9/26 (34%), Gaps = 1/26 (3%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPN 537
+VG GK+ ++ F
Sbjct: 12 CVVVGDGAVGKTCLLMSYANDAFPEE 37
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 28.1 bits (62), Expect = 4.0
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 14/94 (14%)
Query: 513 VAIVGGSGSGKSTII-RLLY------RFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQ 565
+ I +GK+T R+LY + E + GA + D R I I
Sbjct: 9 IGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATM------DFMEQERERGITITAA 62
Query: 566 DPVLFHDTILYNINYGDKSKSY-EETIEAAKLAD 598
F NI + E + ++ D
Sbjct: 63 VTTCFWKDHRINIIDAPGHVDFTIEVERSMRVLD 96
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 27.8 bits (61), Expect = 4.3
Identities = 15/133 (11%), Positives = 36/133 (27%), Gaps = 22/133 (16%)
Query: 513 VAIVGGSGSGKSTII-RLLYRFFEPNAGAIYIDGKNINDVDLDSLRRHIAIVPQDPVLFH 571
+ ++G SGKSTI+ ++ +G +D + H+ V
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGI------FETKFQVDKVNFHMFDVGGQRDERR 62
Query: 572 DTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGGEKQRVAI 631
I + + ++ N + + +
Sbjct: 63 KWIQCFNDVTAIIFVVASSSY-----NMVIREDNQTNRLQEALNLFKSIWNNRW------ 111
Query: 632 ARAILKNTPILVF 644
L+ +++F
Sbjct: 112 ----LRTISVILF 120
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 27.6 bits (60), Expect = 4.3
Identities = 6/21 (28%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Query: 513 VAIVGGSGSGKSTIIRLLYRF 533
+ ++G +GK+T LL +
Sbjct: 19 ILLLGLDNAGKTT---LLKQL 36
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate
ligase MurD {Escherichia coli [TaxId: 562]}
Length = 93
Score = 26.6 bits (58), Expect = 4.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 509 AGKSVAIVGGSGSGKSTIIRLLYRFFEP 536
GK+V I+G +G S + L R P
Sbjct: 4 QGKNVVIIGLGLTGLSCVDFFLARGVTP 31
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 27.2 bits (59), Expect = 4.7
Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 12/60 (20%)
Query: 513 VAIVGGSGSGKSTIIRLL------------YRFFEPNAGAIYIDGKNINDVDLDSLRRHI 560
+ IVG GKST++ L + + I I G VD +R
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 62
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 28.2 bits (62), Expect = 4.8
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 495 HTKRIFSNLNFTIPAGKS-VAIVGGSGSGKSTIIRLLYRF 533
+R+ + ++G +G GK+ I R L +
Sbjct: 33 RWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKL 72
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 28.0 bits (61), Expect = 5.0
Identities = 3/36 (8%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 510 GKSVAIVGGSGSGKST--IIRLLYRFFEPNAGAIYI 543
+ + G+GK+ + ++ + + +
Sbjct: 9 KRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLIL 44
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 28.2 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
VA+ G +GSGKS+ I L
Sbjct: 59 VAVTGETGSGKSSFINTL 76
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.3 bits (59), Expect = 5.1
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 9/36 (25%)
Query: 498 RIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRF 533
R+F++ + IVG +GK+T +LY+F
Sbjct: 9 RLFNHQEHKV------IIVGLDNAGKTT---ILYQF 35
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 27.6 bits (60), Expect = 5.3
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
+ ++G G+GK T L
Sbjct: 5 MVLIGPPGAGKGTQAPNL 22
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 27.6 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 497 KRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRF 533
K I + A V I G SG GK + RL+++
Sbjct: 10 KEILEKIKKISCAECPVLITGESGVGKEVVARLIHKL 46
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 122
Score = 26.6 bits (59), Expect = 5.4
Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Query: 510 GKSVAIVGGSGSGKSTIIR-LLYRFFEPNAGAIY--IDGKNINDV 551
G S+ + + + LL F + G Y + N ++
Sbjct: 6 GFSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHNNKTEL 50
>d1esfa2 d.15.6.1 (A:121-233) Staphylococcal enterotoxin A, SEA
{Staphylococcus aureus [TaxId: 1280]}
Length = 113
Score = 26.6 bits (59), Expect = 5.7
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 94 NCFHPGASTLTTTNEIETAKEEVTSQE 120
N + G ++T K+ VT QE
Sbjct: 8 NLWLDGKQNTVPLETVKTNKKNVTVQE 34
Score = 26.6 bits (59), Expect = 5.7
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 751 NCFHPGASTLTTTNEIETAKEEVTSQE 777
N + G ++T K+ VT QE
Sbjct: 8 NLWLDGKQNTVPLETVKTNKKNVTVQE 34
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 27.2 bits (59), Expect = 5.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
V ++GG G+GK T +
Sbjct: 4 VFVLGGPGAGKGTQCARI 21
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.4 bits (59), Expect = 6.2
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 499 IFSNLNFTIPAGKSVAIVGGSGSGKSTII-RLLYRFFEPN 537
+ L GK + +G +GK+T++ L +
Sbjct: 3 VLQFLGLYKKTGK-LVFLGLDNAGKTTLLHMLKDDRLGQH 41
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 27.7 bits (61), Expect = 6.5
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 4/82 (4%)
Query: 480 ASIEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFFEPNAG 539
A + + +D + + IP + G SGK+T+ L G
Sbjct: 124 AGVAWLHCLLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLEL----CG 179
Query: 540 AIYIDGKNINDVDLDSLRRHIA 561
++ D L I
Sbjct: 180 GKALNVNLPLDRLNFELGVAID 201
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 26.8 bits (58), Expect = 7.5
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
+ ++G G+GK T +
Sbjct: 3 LVLMGLPGAGKGTQAEKI 20
>d1gppa_ b.86.1.2 (A:) VMA1-derived endonuclease (VDE) PI-Scei
intein {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 229
Score = 27.2 bits (60), Expect = 7.8
Identities = 10/69 (14%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 637 KNTPILVFDEATSSLDSITENNILSSLKTASRNKTTICIAH-RLSTIKHLLGYKAHRKTS 695
K T +L+ D + +++I N + R + + ++ ++AH+ S
Sbjct: 6 KGTNVLMADGSIECIENIEVGNKVMGKDGRPREVIKLPRGSETMYSVVQKSQHRAHKSDS 65
Query: 696 TNLVRGNSS 704
+ +
Sbjct: 66 SREMPELLK 74
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 26.8 bits (58), Expect = 8.2
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
V I G SGK T L+
Sbjct: 6 VMISGAPASGKGTQCELI 23
>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 144
Score = 26.3 bits (57), Expect = 8.5
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKN 547
VA+VG +GS ++ LL P +
Sbjct: 5 VAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE 39
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain
{Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Length = 267
Score = 27.2 bits (60), Expect = 8.8
Identities = 6/53 (11%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Query: 482 IEFRDVNFSYIDKHTKRIFSNLNFTIPAGKSVAIVGGSGSGKSTIIRLLYRFF 534
+E + Y + ++ + G + +GK+ I +
Sbjct: 79 LELNGYDPQYAASVFLGWATKKF---GKRNTIWLFGPATTGKTNIAEAIAHTV 128
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1
ATP synthase {Spinach (Spinacia oleracea), chloroplast
[TaxId: 3562]}
Length = 276
Score = 27.2 bits (60), Expect = 8.9
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 502 NLNFTIPAGKSVAIVGGSGSGKSTIIRLL 530
+ + G+ I+G +GK+ +
Sbjct: 59 DAMIPVGRGQRELIIGDRQTGKTAVATDT 87
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 26.7 bits (58), Expect = 9.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
AI+G GSGK T+ +
Sbjct: 9 AAIMGAPGSGKGTVSSRI 26
>d2gufa1 f.4.3.3 (A:4-594) Outer membrane cobalamin transporter BtuB
{Escherichia coli [TaxId: 562]}
Length = 591
Score = 27.2 bits (58), Expect = 9.0
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 512 SVAIVGGSGSGKSTIIRLLYRFFEPNAGAIYIDGKNINDVDLDS 555
V I GSG+ + I + R + + IDG +N +
Sbjct: 48 GVDITQNGGSGQLSSIFI--RGTNASHVLVLIDGVRLNLAGVSG 89
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.9 bits (58), Expect = 9.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 513 VAIVGGSGSGKSTIIRLLYRFFEPNAGAIYI 543
V VG +GSGK+T+ R+ E N Y+
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 26.8 bits (58), Expect = 9.3
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 513 VAIVGGSGSGKSTIIRLL 530
+ ++G G+GK T +
Sbjct: 3 IVLMGLPGAGKGTQADRI 20
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 26.8 bits (58), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 511 KSVAIVGGSGSGKSTIIRLL 530
K + +VGG GSGK T +
Sbjct: 9 KIIFVVGGPGSGKGTQCEKI 28
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 26.6 bits (58), Expect = 9.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 508 PAGKSVAIVGGSGSGKSTIIRLLYRFF 534
P G+ V +VG +G GK+T I L R++
Sbjct: 4 PKGRVVLVVGVNGVGKTTTIAKLGRYY 30
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 27.1 bits (59), Expect = 9.7
Identities = 16/133 (12%), Positives = 39/133 (29%), Gaps = 10/133 (7%)
Query: 508 PAGKSVAIVGGSG--SGKSTIIRLLYRF-FEPNAGAIYIDGKNINDVDLDSLRRHIAIVP 564
A K++A G + +++ G ++ ++ ++ I
Sbjct: 132 LAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSI 191
Query: 565 QDPVLFHDTILYNINYGDKSKSYEETIEAAKLADLHNSIIKWPNHYETQVGERGLKLSGG 624
+ L + + E L ++ I + + + RG +SGG
Sbjct: 192 INLQDVAVFGLRFLEEHYPERLKERY----GLDEIPEDIAELFDAIGEK---RGCLMSGG 244
Query: 625 EKQRVAIARAILK 637
I++
Sbjct: 245 LINYDKTTEVIIR 257
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.130 0.362
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,671,303
Number of extensions: 119088
Number of successful extensions: 669
Number of sequences better than 10.0: 1
Number of HSP's gapped: 633
Number of HSP's successfully gapped: 220
Length of query: 816
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 723
Effective length of database: 1,130,706
Effective search space: 817500438
Effective search space used: 817500438
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.5 bits)