BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4348
(355 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 322 bits (826), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/278 (55%), Positives = 202/278 (72%), Gaps = 5/278 (1%)
Query: 8 TSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIA 67
T+IE EFE++D++ W +Y IR S+ Y + + AK ENR+ NRYRDV PYDHSR+
Sbjct: 3 TTIEREFEELDTQRRWQPLYLEIRNESHDYPHRV--AKFPENRNRNRYRDVSPYDHSRVK 60
Query: 68 LKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQ 127
L+ NDYINA+LV+IE+A R YILTQGPLPNT HFW+MVW+Q KA+VMLN+I+EK
Sbjct: 61 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES 120
Query: 128 LKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTT 187
+KC+QYWPT L F + SV L SE SY+ +++ + S + R + FHYTT
Sbjct: 121 VKCAQYWPTDDQEML-FKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTT 179
Query: 188 WPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDG 247
WPDFGVP+SP + L F+ VR+SG+L+ + GP ++HCSAGIGRSGTF LVD L L+ G
Sbjct: 180 WPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKG 239
Query: 248 EINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
+ +++++++LL MR YRMGLIQTPDQLRFSY AIIEG
Sbjct: 240 D--DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEG 275
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 148/282 (52%), Positives = 195/282 (69%), Gaps = 3/282 (1%)
Query: 5 REKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHS 64
R +E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHS
Sbjct: 32 RGSMEMEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHS 89
Query: 65 RIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIE 124
RI L + NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++E
Sbjct: 90 RIKLHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVME 149
Query: 125 KNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFH 184
K LKC+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FH
Sbjct: 150 KGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFH 209
Query: 185 YTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKL 243
YTTWPDFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L +
Sbjct: 210 YTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLM 269
Query: 244 ISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
+ ++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 270 DKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 311
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 9 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 66
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 67 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 127 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 187 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 246
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 247 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 283
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 9 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 66
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 67 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 127 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 187 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 246
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 247 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 283
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 2 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 59
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 60 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 119
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 120 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 179
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 180 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 239
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 240 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 276
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 5 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 62
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 63 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 122
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 123 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 182
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 183 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 242
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 243 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 279
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 314 bits (805), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 313 bits (803), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRY DV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPSRVAKLPKNKNRNRYCDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT+ HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 313 bits (803), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE +Y+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 313 bits (802), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE +Y+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT +QLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTAEQLRFSYLAVIEG 277
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT +QLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTAEQLRFSYLAVIEG 277
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 194/277 (70%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTT+P
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTFP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1G1F|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Tri-Phosphorylated Peptide (Rdi(Ptr)
Etd(Ptr)(Ptr)rk) From The Insulin Receptor Kinase
pdb|1G1G|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Mono-Phosphorylated Peptide (Etdy(Ptr)
Rkggkgll) From The Insulin Receptor Kinase
pdb|1G1H|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Bis-Phosphorylated Peptide
(Etd(Ptr)(Ptr) Rkggkgll) From The Insulin Receptor
Kinase
pdb|2B4S|A Chain A, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|C Chain C, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
Length = 298
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHASAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1EEN|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-D-A-D-Bpa-Ptyr-L-I-P-Q-Q-G
pdb|1EEO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-E-L-E-F-Ptyr-M-D-Y-E-Nh2
pdb|1PTY|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Phosphotyrosine Molecules
Length = 321
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1AAX|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Bis(Para-Phosphophenyl)methane (Bppm)
Molecules
Length = 321
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1OEO|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To Sulfonic
Acid
pdb|1OET|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEU|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEV|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
Length = 321
Score = 311 bits (798), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|3EU0|A Chain A, Crystal Structure Of The S-Nitrosylated Cys215 Of Ptp1b
Length = 327
Score = 311 bits (798), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 9 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 66
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 67 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 127 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 187 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKD 246
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 247 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 283
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH +AGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHAAAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 311 bits (797), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 9 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 66
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 67 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 127 WAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 187 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 246
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 247 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 283
>pdb|1PTU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Hexa-Peptide
(Dadepyl-Nh2)
pdb|1PTT|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Tetra-Peptide
(Ac-Depyl-Nh2)
Length = 321
Score = 311 bits (796), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE +Y+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1PTV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine
Length = 321
Score = 310 bits (793), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 144/277 (51%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE +Y+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 308 bits (790), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/291 (51%), Positives = 198/291 (68%), Gaps = 7/291 (2%)
Query: 17 IDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYI 76
ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L + NDYI
Sbjct: 14 IDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 71
Query: 77 NANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
NA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LKC+QYWP
Sbjct: 72 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQ 131
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQS 196
++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWPDFGVP+S
Sbjct: 132 KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPES 191
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQ 255
P + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + + ++V ++
Sbjct: 192 PASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIK 251
Query: 256 EILLEMRHYRMGLIQTPDQLRFSYQAIIEG---IHTDWETDDEFF-VFHSD 302
++LLEMR +RMGLIQT DQLRFSY A+IEG I D D++ +FH D
Sbjct: 252 KVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELFHED 302
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 308 bits (789), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 193/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRY +V P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE +Y+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIQTADQLRFSYLAVIEG 277
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 308 bits (788), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 143/270 (52%), Positives = 189/270 (70%), Gaps = 3/270 (1%)
Query: 17 IDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYI 76
ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L + NDYI
Sbjct: 22 IDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 79
Query: 77 NANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
NA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LKC+QYWP
Sbjct: 80 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQ 139
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQS 196
++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWPDFGVP+S
Sbjct: 140 KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPES 199
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQ 255
P + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + + ++V ++
Sbjct: 200 PASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIK 259
Query: 256 EILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 260 KVLLEMRKFRMGLIQTADQLRFSYLAVIEG 289
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 308 bits (788), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 143/270 (52%), Positives = 189/270 (70%), Gaps = 3/270 (1%)
Query: 17 IDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYI 76
ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L + NDYI
Sbjct: 17 IDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 74
Query: 77 NANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
NA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LKC+QYWP
Sbjct: 75 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQ 134
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQS 196
++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWPDFGVP+S
Sbjct: 135 KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPES 194
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQ 255
P + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + + ++V ++
Sbjct: 195 PASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIK 254
Query: 256 EILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 255 KVLLEMRKFRMGLIQTADQLRFSYLAVIEG 284
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 308 bits (788), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 143/270 (52%), Positives = 189/270 (70%), Gaps = 3/270 (1%)
Query: 17 IDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYI 76
ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L + NDYI
Sbjct: 22 IDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 79
Query: 77 NANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
NA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LKC+QYWP
Sbjct: 80 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQ 139
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQS 196
++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWPDFGVP+S
Sbjct: 140 KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPES 199
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQ 255
P + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + + ++V ++
Sbjct: 200 PASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIK 259
Query: 256 EILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 260 KVLLEMRKFRMGLIQTADQLRFSYLAVIEG 289
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 306 bits (785), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 142/270 (52%), Positives = 189/270 (70%), Gaps = 3/270 (1%)
Query: 17 IDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYI 76
ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L + NDYI
Sbjct: 22 IDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 79
Query: 77 NANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
NA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK +KC+QYWP
Sbjct: 80 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSVKCAQYWPQ 139
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQS 196
++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWPDFGVP+S
Sbjct: 140 KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPES 199
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQ 255
P + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + + ++V ++
Sbjct: 200 PASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIK 259
Query: 256 EILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 260 KVLLEMRKFRMGLIQTADQLRFSYLAVIEG 289
>pdb|1A5Y|A Chain A, Protein Tyrosine Phosphatase 1b Cysteinyl-Phosphate
Intermediate
Length = 330
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 192/277 (69%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHXSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +RMGLI T +QLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRMGLIATAEQLRFSYLAVIEG 277
>pdb|1I57|A Chain A, Crystal Structure Of Apo Human Ptp1b (C215s) Mutant
Length = 310
Score = 304 bits (778), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 142/270 (52%), Positives = 188/270 (69%), Gaps = 3/270 (1%)
Query: 17 IDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYI 76
ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L + NDYI
Sbjct: 22 IDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 79
Query: 77 NANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
NA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LKC+QYWP
Sbjct: 80 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQ 139
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQS 196
++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWPDFGVP+S
Sbjct: 140 KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPES 199
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQ 255
P + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + + ++V ++
Sbjct: 200 PASFLNFLFKVRESGSLSPEHGPVVVHSSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIK 259
Query: 256 EILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 260 KVLLEMRKFRMGLIQTADQLRFSYLAVIEG 289
>pdb|1PA1|A Chain A, Crystal Structure Of The C215d Mutant Of Protein Tyrosine
Phosphatase 1b
Length = 310
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/270 (52%), Positives = 188/270 (69%), Gaps = 3/270 (1%)
Query: 17 IDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYI 76
ID WA +YQ IR A D+ AK +N++ NRYRDV P+DHSRI L + NDYI
Sbjct: 22 IDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 79
Query: 77 NANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
NA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LKC+QYWP
Sbjct: 80 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQ 139
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQS 196
++ F D NL + L SE SY+ R + + + + + R ++ FHYTTWPDFGVP+S
Sbjct: 140 KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPES 199
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQ 255
P + L F+ VR+SG+L GP +VH SAGIGRSGTF L D C+L + + ++V ++
Sbjct: 200 PASFLNFLFKVRESGSLSPEHGPVVVHDSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIK 259
Query: 256 EILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 260 KVLLEMRKFRMGLIQTADQLRFSYLAVIEG 289
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 191/277 (68%), Gaps = 3/277 (1%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK 69
+E EFE ID WA +YQ IR A D+ AK +N++ NRY +V P+DHSRI L
Sbjct: 3 MEKEFEQIDKSGSWAAIYQDIR--HEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLH 60
Query: 70 RCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLK 129
+ NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++EK LK
Sbjct: 61 QEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
C+QYWP ++ F D NL + L SE +Y+ R + + + + + R ++ FHYTTWP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD-CVLKLISDGE 248
DFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D C+L + +
Sbjct: 181 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
++V ++++LL+MR +R LIQT DQLRFSY A+IEG
Sbjct: 241 PSSVDIKKVLLDMRKFRCQLIQTADQLRFSYLAVIEG 277
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 166/304 (54%), Gaps = 28/304 (9%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS------NDYINANL 80
++ ++ + + T + + EN+H NRY +++ YDHSR+ L+ +DYINAN
Sbjct: 27 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 86
Query: 81 VEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
V+ + YI TQGPL +T FW M+WEQN IVM+ ++EK + KC QYWPT +S
Sbjct: 87 VDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSE 146
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK-----------ERHVILFHYTTWP 189
+ N+ V L S H+ + R + + + K ER VI +HYT WP
Sbjct: 147 EYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWP 202
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI 249
D GVP+ +L F+R R S A GP +VHCSAG+GR+GT+I++D +L+ I D
Sbjct: 203 DMGVPEYALPVLTFVR--RSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDK-- 258
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDDEFFVFHS--DSSLIN 307
+ V+V L +R R L+QT +Q F + A++E I ET+ HS +S LI
Sbjct: 259 STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI-LGKETEVSSNQLHSYVNSILIP 317
Query: 308 GNGS 311
G G
Sbjct: 318 GVGG 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 33/276 (11%)
Query: 29 RIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRC----SNDYINANLVEIE 84
++ T NA A++ N+ NR V+P + +R+ L DYINA+ +
Sbjct: 330 KLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGY 389
Query: 85 QANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVML--NKIIEKNQLKCSQYWPTSSSS-D 141
+ ++I+TQ PLP+T FW M+W+ N + IVML N+ + +++ YWP+ S +
Sbjct: 390 YRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFV---YWPSREESMN 446
Query: 142 LEFPDVNL----SVHLDSE---VNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVP 194
E V L + L +E + H + + E++++ +V+ + P + P
Sbjct: 447 CEAFTVTLISKDRLCLSNEEQIIIHDFIL---------EATQDDYVLEVRHFQCPKWPNP 497
Query: 195 QSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDG--EINNV 252
+P + + V K AL + GP IVH G +G C L +S N V
Sbjct: 498 DAPISSTFELINVIKEEALTRD-GPTIVHDEYGAVSAGML----CALTTLSQQLENENAV 552
Query: 253 SVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
V ++ + R G+ +Q +F Y+A++ + T
Sbjct: 553 DVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVST 588
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 155/277 (55%), Gaps = 25/277 (9%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS------NDYINANL 80
++ ++ + + T + + EN+H NRY +++ YDHSR+ L+ +DYINAN
Sbjct: 34 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 93
Query: 81 VEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
V+ + YI TQGPL +T FW M+WEQN IVM+ ++EK + KC QYWPT +S
Sbjct: 94 VDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSE 153
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK-----------ERHVILFHYTTWP 189
+ N+ V L S H+ + R + + + K ER VI +HYT WP
Sbjct: 154 EYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWP 209
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI 249
D GVP+ +L F+R R S A GP +VHCSAG+GR+GT+I++D +L+ I D
Sbjct: 210 DMGVPEYALPVLTFVR--RSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDK-- 265
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ V+V L +R R L+QT +Q F + A++E I
Sbjct: 266 STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI 302
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 155/277 (55%), Gaps = 25/277 (9%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS------NDYINANL 80
++ ++ + + T + + EN+H NRY +++ YDHSR+ L+ +DYINAN
Sbjct: 45 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 104
Query: 81 VEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
V+ + YI TQGPL +T FW M+WEQN IVM+ ++EK + KC QYWPT +S
Sbjct: 105 VDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSE 164
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK-----------ERHVILFHYTTWP 189
+ N+ V L S H+ + R + + + K ER VI +HYT WP
Sbjct: 165 EYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWP 220
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI 249
D GVP+ +L F+R R S A GP +VHCSAG+GR+GT+I++D +L+ I D
Sbjct: 221 DMGVPEYALPVLTFVR--RSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDK-- 276
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ V+V L +R R L+QT +Q F + A++E I
Sbjct: 277 STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI 313
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 155/277 (55%), Gaps = 25/277 (9%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS------NDYINANL 80
++ ++ + + T + + EN+H NRY +++ YDHSR+ L+ +DYINAN
Sbjct: 35 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 94
Query: 81 VEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
V+ + YI TQGPL +T FW M+WEQN IVM+ ++EK + KC QYWPT +S
Sbjct: 95 VDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSE 154
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK-----------ERHVILFHYTTWP 189
+ N+ V L S H+ + R + + + K ER VI +HYT WP
Sbjct: 155 EYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWP 210
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI 249
D GVP+ +L F+R R S A GP +VHCSAG+GR+GT+I++D +L+ I D
Sbjct: 211 DMGVPEYALPVLTFVR--RSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDK-- 266
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ V+V L +R R L+QT +Q F + A++E I
Sbjct: 267 STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI 303
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 147/263 (55%), Gaps = 12/263 (4%)
Query: 28 QRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR----CSNDYINANLVEI 83
Q ++ +T + + N+ NRY +VI YDHSR+ L+ +DYINAN V+
Sbjct: 34 QEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYVDG 93
Query: 84 EQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLE 143
+ YI TQGPLP T FW MVWEQ IVM+ ++ EK+++KC QYWP +
Sbjct: 94 YRRQNAYIATQGPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQYWPNRGTETYG 153
Query: 144 FPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRF 203
F V L LD+ + + F R + SS++R V F +T WPD GVP+ PT L F
Sbjct: 154 FIQVTL---LDT-IELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAF 209
Query: 204 IRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRH 263
+R V+ D GP +VHCSAG+GR+G FI++D +L+ I + +V L MR
Sbjct: 210 LRRVKTCNPPD--AGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGHVTL--MRS 265
Query: 264 YRMGLIQTPDQLRFSYQAIIEGI 286
R ++QT DQ F ++A++E +
Sbjct: 266 QRNYMVQTEDQYSFIHEALLEAV 288
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 144/281 (51%), Gaps = 24/281 (8%)
Query: 8 TSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIA 67
T +ELEF+ + + S A+ A N+ NR +++PY+ +R+
Sbjct: 317 TGMELEFKRLAN--------------SKAHTSRFISANLPCNKFKNRLVNIMPYESTRVC 362
Query: 68 LKRC----SNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKII 123
L+ +DYINA+ ++ + + YI TQGPL T FW M+WE N +VML K+
Sbjct: 363 LQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWENNSTIVVMLTKLR 422
Query: 124 EKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILF 183
E + KC QYWP S+ ++ V +E N +I R +VTD + R V F
Sbjct: 423 EMGREKCHQYWPAERSARYQY----FVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQF 478
Query: 184 HYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKL 243
+T WP+ GVP+S + FI V K+ GP VHCSAG+GR+G FI + VL+
Sbjct: 479 QFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLER 538
Query: 244 ISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
+ + V + + + +R R ++QT D+ +F YQA +E
Sbjct: 539 MRYEGV--VDIFQTVKMLRTQRPAMVQTEDEYQFCYQAALE 577
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 149/264 (56%), Gaps = 25/264 (9%)
Query: 40 TLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS------NDYINANLVEIEQANRKYILT 93
T + + EN+H NRY +++ YDHSR+ L+ +DYINAN V+ + YI T
Sbjct: 47 TAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIAT 106
Query: 94 QGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHL 153
QGPL +T FW M+WEQN IVM+ ++EK + KC QYWPT ++ + N+ V L
Sbjct: 107 QGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENTEEYG----NIIVTL 162
Query: 154 DSEVNHSYFITRNIRVTDKESSK-----------ERHVILFHYTTWPDFGVPQSPTALLR 202
S H+ + R + + + K ER VI +HYT WPD GVP+ +L
Sbjct: 163 KSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLT 222
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMR 262
F+R R S A GP +VHCSAG+GR+GT+I++D +L+ I D + V+V L +R
Sbjct: 223 FVR--RSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDK--STVNVLGFLKHIR 278
Query: 263 HYRMGLIQTPDQLRFSYQAIIEGI 286
R L+QT +Q F + A++E I
Sbjct: 279 TQRNYLVQTEEQYIFIHDALLEAI 302
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 147/263 (55%), Gaps = 12/263 (4%)
Query: 28 QRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRC----SNDYINANLVEI 83
Q ++ +T + + N+ NRY +VI YDHSR+ L+ +DYINAN V+
Sbjct: 36 QEYESIDPGQQFTWEHSNLEANKPKNRYANVIAYDHSRVILQPLEGIMGSDYINANYVDG 95
Query: 84 EQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLE 143
+ YI TQGPLP T FW MVWEQ +VM+ ++ EK+++KC QYWP +
Sbjct: 96 YRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRIKCDQYWPNRGTETYG 155
Query: 144 FPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRF 203
F V L LD+ + + F R + SS++R V F +T WPD GVP+ PT L F
Sbjct: 156 FIQVTL---LDT-MELATFCVRTFSLHKNGSSEKREVRHFQFTAWPDHGVPEYPTPFLAF 211
Query: 204 IRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRH 263
+R V+ D GP +VHCSAG+GR+G FI++D +L+ I + +V L MR
Sbjct: 212 LRRVKTCNPPD--AGPIVVHCSAGVGRTGCFIVIDAMLERIKTEKTVDVYGHVTL--MRS 267
Query: 264 YRMGLIQTPDQLRFSYQAIIEGI 286
R ++QT DQ F ++A++E +
Sbjct: 268 QRNYMVQTEDQYGFIHEALLEAV 290
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 143/282 (50%), Gaps = 26/282 (9%)
Query: 8 TSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIA 67
T +ELEF+ + S S A+ A N+ NR +++PY+ SR+
Sbjct: 319 TGMELEFKRLAS--------------SKAHTSRFITASLPCNKFKNRLVNILPYESSRVC 364
Query: 68 LKRC----SNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKII 123
L+ +DYINA+ ++ + + YI TQGPL T FW +WE N +VML K+
Sbjct: 365 LQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRALWENNSTIVVMLTKLR 424
Query: 124 EKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILF 183
E + KC QYWP S+ ++ V +E N +I R +VTD + R V F
Sbjct: 425 EMGREKCHQYWPAERSARYQY----FVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQF 480
Query: 184 HYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVL-K 242
+T WP+ G P+S + FI V K+ GP VHCSAG+GR+G FI + VL +
Sbjct: 481 QFTDWPEQGAPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLER 540
Query: 243 LISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
+ +G ++ ++L R R ++QT D+ +F +QA +E
Sbjct: 541 MRYEGVVDIFQTVKVL---RTQRPAMVQTEDEYQFCFQAALE 579
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 155/277 (55%), Gaps = 25/277 (9%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS------NDYINANL 80
++ ++ + + T + + EN+H NRY +++ YDHSR+ L+ +DYINAN
Sbjct: 34 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 93
Query: 81 VEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
V+ + YI TQGPL +T FW M+WEQN I+M+ ++EK + KC QYWPT ++
Sbjct: 94 VDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIIMITNLVEKGRRKCDQYWPTENTE 153
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK-----------ERHVILFHYTTWP 189
+ N+ V L S H+ + R + + + K ER VI +HYT WP
Sbjct: 154 EYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWP 209
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI 249
D GVP+ +L F+R R S A GP +VHCSAG+GR+GT+I++D +L+ I D
Sbjct: 210 DMGVPEYALPVLTFVR--RSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDK-- 265
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ V+V L +R R L+QT +Q F + A++E I
Sbjct: 266 STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI 302
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 147/246 (59%), Gaps = 9/246 (3%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALK---RCSNDYINANLVEIEQANRKYILTQGPLPNT 100
A+ +ENR NRY +V+PYD SR+ L ++DYINAN + + + +I TQGPLPNT
Sbjct: 65 AEIAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKDFIATQGPLPNT 124
Query: 101 IAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHS 160
+ FW MVWE+N AIVML K +E+ + KC +YWP+ + D +++V + SEV
Sbjct: 125 LKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQAQDYG----DITVAMTSEVVLP 180
Query: 161 YFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPP 220
+ R+ V + +SS+ + FH+T+WPD GVP + L+ F VR P
Sbjct: 181 EWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIPPESPI 240
Query: 221 IVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ 280
+VHCSAG+GR+GTFI +D ++ I + N V V I+ ++R +R ++QT DQ F Q
Sbjct: 241 LVHCSAGVGRTGTFIAIDRLIYQIENE--NTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQ 298
Query: 281 AIIEGI 286
+++ I
Sbjct: 299 CVLDII 304
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 152/277 (54%), Gaps = 25/277 (9%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS------NDYINANL 80
++ ++ + + T + + EN+H NRY +++ YDHSR+ L+ +DYINAN
Sbjct: 35 FEEVQRCTADXNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 94
Query: 81 VEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
V+ + YI TQGPL +T FW +WEQN IV + ++EK + KC QYWPT +S
Sbjct: 95 VDGYNKAKAYIATQGPLKSTFEDFWRXIWEQNTGIIVXITNLVEKGRRKCDQYWPTENSE 154
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK-----------ERHVILFHYTTWP 189
+ N+ V L S H+ + R + + + K ER VI +HYT WP
Sbjct: 155 EYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWP 210
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI 249
D GVP+ +L F+R R S A GP +VHCSAG+GR+GT+I++D L+ I D
Sbjct: 211 DXGVPEYALPVLTFVR--RSSAARXPETGPVLVHCSAGVGRTGTYIVIDSXLQQIKDK-- 266
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ V+V L +R R L+QT +Q F + A++E I
Sbjct: 267 STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI 303
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 147/262 (56%), Gaps = 12/262 (4%)
Query: 28 QRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRC----SNDYINANLVEI 83
Q ++ +T +++ N+ NRY +VI YDHSR+ L +DYINAN ++
Sbjct: 22 QEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDG 81
Query: 84 EQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLE 143
+ YI TQGPLP T+ FW MVWEQ +VM+ ++ EK+++KC QYWP +
Sbjct: 82 YRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCG 141
Query: 144 FPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRF 203
V L LD+ V + + R + SS++R + F + WPD GVP+ PT +L F
Sbjct: 142 LIQVTL---LDT-VELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAF 197
Query: 204 IRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRH 263
+R V+ LD GP +VHCSAG+GR+G FI++D +L+ + + V + + MR
Sbjct: 198 LRRVKACNPLDA--GPMVVHCSAGVGRTGCFIVIDAMLERMKHEK--TVDIYGHVTCMRS 253
Query: 264 YRMGLIQTPDQLRFSYQAIIEG 285
R ++QT DQ F ++A++E
Sbjct: 254 QRNYMVQTEDQYVFIHEALLEA 275
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 144/281 (51%), Gaps = 24/281 (8%)
Query: 8 TSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIA 67
T++ELEF+ + S S A+ A N+ NR +++PY+ +R+
Sbjct: 305 TAMELEFKLLAS--------------SKAHTSRFISANLPCNKFKNRLVNIMPYELTRVC 350
Query: 68 LKRC----SNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKII 123
L+ +DYINA+ ++ + + YI TQGPL + FW M+WE N IVML K+
Sbjct: 351 LQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLR 410
Query: 124 EKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILF 183
E + KC QYWP S+ ++ V +E N +I R +VTD + R + F
Sbjct: 411 EMGREKCHQYWPAERSARYQY----FVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQF 466
Query: 184 HYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKL 243
+T WP+ GVP++ + FI V K+ GP VHCSAG+GR+G FI + VL+
Sbjct: 467 QFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLER 526
Query: 244 ISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
+ + V + + + +R R ++QT DQ + Y+A +E
Sbjct: 527 MRYEGV--VDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALE 565
>pdb|2NZ6|A Chain A, Crystal Structure Of The Ptprj Inactivating Mutant C1239s
Length = 316
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 145/244 (59%), Gaps = 9/244 (3%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALK---RCSNDYINANLVEIEQANRKYILTQGPLPNT 100
A+ +ENR NRY +V+PYD SR+ L ++DYINAN + + + +I TQGPLPNT
Sbjct: 65 AELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKDFIATQGPLPNT 124
Query: 101 IAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHS 160
+ FW MVWE+N AI+ML K +E+ + KC +YWP+ + D +++V + SE+
Sbjct: 125 LKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQDYG----DITVAMTSEIVLP 180
Query: 161 YFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPP 220
+ R+ V + ++S+ + FH+T+WPD GVP + L+ F VR P
Sbjct: 181 EWTIRDFTVKNIQTSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQSPPESPI 240
Query: 221 IVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ 280
+VH SAG+GR+GTFI +D ++ I + N V V I+ ++R +R ++QT DQ F Q
Sbjct: 241 LVHSSAGVGRTGTFIAIDRLIYQIENE--NTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQ 298
Query: 281 AIIE 284
+++
Sbjct: 299 CVLD 302
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 145/244 (59%), Gaps = 9/244 (3%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALK---RCSNDYINANLVEIEQANRKYILTQGPLPNT 100
A+ +ENR NRY +V+PYD SR+ L ++DYINAN + + + +I TQGPLPNT
Sbjct: 65 AELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKDFIATQGPLPNT 124
Query: 101 IAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHS 160
+ FW MVWE+N AI+ML K +E+ + KC +YWP+ + D +++V + SE+
Sbjct: 125 LKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQDYG----DITVAMTSEIVLP 180
Query: 161 YFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPP 220
+ R+ V + ++S+ + FH+T+ PD GVP + L+ F VR P
Sbjct: 181 EWTIRDFTVKNIQTSESHPLRQFHFTSAPDHGVPDTTDLLINFRYLVRDYMKQSPPESPI 240
Query: 221 IVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ 280
+VHCSAG+GR+GTFI +D ++ I + N V V I+ ++R +R ++QT DQ F Q
Sbjct: 241 LVHCSAGVGRTGTFIAIDRLIYQIENE--NTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQ 298
Query: 281 AIIE 284
+++
Sbjct: 299 CVLD 302
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 144/263 (54%), Gaps = 12/263 (4%)
Query: 28 QRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRC----SNDYINANLVEI 83
Q ++ +T + + N+ NRY +VI YDHSR+ L +DY+NAN ++
Sbjct: 31 QEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDG 90
Query: 84 EQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLE 143
+ YI TQG LP T FW M+WEQ +VM+ K+ E++++KC QYWP+ +
Sbjct: 91 YRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHG 150
Query: 144 FPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRF 203
V L LD+ V + + R + SS++R V F +T WPD GVP+ PT L F
Sbjct: 151 LVQVTL---LDT-VELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAF 206
Query: 204 IRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRH 263
+R V+ D GP +VHCSAG+GR+G FI++D +L+ I + ++ L MR
Sbjct: 207 LRRVKTCNPPD--AGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTL--MRA 262
Query: 264 YRMGLIQTPDQLRFSYQAIIEGI 286
R ++QT DQ F + A++E +
Sbjct: 263 QRNYMVQTEDQYIFIHDALLEAV 285
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 153/266 (57%), Gaps = 9/266 (3%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYIN 77
DS L + Y+ ++ V + + D A ENR NRY +++PYD +R+ L S DYIN
Sbjct: 24 DSNYLLSKEYEELKDVGR--NQSCDIALLPENRGKNRYNNILPYDATRVKLSGGS-DYIN 80
Query: 78 ANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTS 137
A+ + R+YI+TQGPLP T FW MVWEQN IVM+ + +EK ++KC YWP
Sbjct: 81 ASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPAD 140
Query: 138 SSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVIL-FHYTTWPDFGVPQS 196
S L + D L + + SE + R ++ +E +I FHYT WPD GVP++
Sbjct: 141 QDS-LYYGD--LILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPET 197
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQE 256
+L++F+R VR GP +VHCSAG+GR+GTFI +D +L+ + + +V +
Sbjct: 198 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKD--SVDIYG 255
Query: 257 ILLEMRHYRMGLIQTPDQLRFSYQAI 282
+ ++R +R+ ++QT Q + +Q +
Sbjct: 256 AVHDLRLHRVHMVQTECQYVYLHQCV 281
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 177 bits (448), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 154/271 (56%), Gaps = 14/271 (5%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CS 72
DS L + Y+ ++ V + + D A ENR NRY +++PYD +R+ L CS
Sbjct: 38 DSNYLLSKEYEELKDVGR--NQSCDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCS 95
Query: 73 NDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQ 132
DYINA+ + R+YI+TQGPLP T FW MVWEQN IVM+ + +EK ++KC
Sbjct: 96 -DYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDH 154
Query: 133 YWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVIL-FHYTTWPDF 191
YWP S L + D L + + SE + R ++ +E +I FHYT WPD
Sbjct: 155 YWPADQDS-LYYGD--LILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDH 211
Query: 192 GVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINN 251
GVP++ +L++F+R VR GP +VHCSAG+GR+GTFI +D +L+ + + +
Sbjct: 212 GVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKD--S 269
Query: 252 VSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
V + + ++R +R+ ++QT Q + +Q +
Sbjct: 270 VDIYGAVHDLRLHRVHMVQTECQYVYLHQCV 300
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 154/271 (56%), Gaps = 14/271 (5%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CS 72
DS L + Y+ ++ V + + D A ENR NRY +++PYD +R+ L CS
Sbjct: 22 DSNYLLSKEYEELKDVGR--NQSCDIALLPENRGKNRYNNILPYDATRVKLSNVDDDPCS 79
Query: 73 NDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQ 132
DYINA+ + R+YI+TQGPLP T FW MVWEQN IVM+ + +EK ++KC
Sbjct: 80 -DYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDH 138
Query: 133 YWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVIL-FHYTTWPDF 191
YWP S L + D L + + SE + R ++ +E +I FHYT WPD
Sbjct: 139 YWPADQDS-LYYGD--LILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDH 195
Query: 192 GVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINN 251
GVP++ +L++F+R VR GP +VHCSAG+GR+GTFI +D +L+ + + +
Sbjct: 196 GVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKD--S 253
Query: 252 VSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
V + + ++R +R+ ++QT Q + +Q +
Sbjct: 254 VDIYGAVHDLRLHRVHMVQTECQYVYLHQCV 284
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 149/240 (62%), Gaps = 15/240 (6%)
Query: 49 NRHLNRYRDVIPYDHSRIAL----KRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHF 104
NR NRY +++PYD SR+ L + +DYINAN + + ++YI TQGPLP T F
Sbjct: 58 NRCKNRYTNILPYDFSRVRLVSMNEEEGSDYINANYIPGYNSPQEYIATQGPLPETRNDF 117
Query: 105 WVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFIT 164
W MV +Q + IVML + EK ++KC YWP + + + D+ +V + SE H+ ++
Sbjct: 118 WKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEDP-IAYGDI--TVEMLSEEEHTDWVY 174
Query: 165 RNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTA--LLRFIRAVRKSGALDENMGPPIV 222
RN R++ + ++ V+ F+YT WPD GVP + A +L+F++ VR+ ++ GP I+
Sbjct: 175 RNFRISYADEVQD--VMHFNYTAWPDHGVPTANAAESILQFVQMVRQKSV--KSKGPMII 230
Query: 223 HCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
HCSAG+GR+GTFI +D +L+ I D E V + ++ +MR YRM ++QT +Q F +Q +
Sbjct: 231 HCSAGVGRTGTFIALDWLLQHIRDHEF--VDILGLVSDMRSYRMSMVQTEEQYIFIHQCV 288
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 142/244 (58%), Gaps = 16/244 (6%)
Query: 49 NRHLNRYRDVIPYDHSRIALKRC----SNDYINANLVEIEQANRKYILTQGPLPNTIAHF 104
NR NR+ +++PYDHSR L+ +DYINAN V + R++I+TQGPL +T F
Sbjct: 70 NRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDF 129
Query: 105 WVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFIT 164
W M WE N +AIVML + EK + KC QYWP + + + D+ + + DS + +T
Sbjct: 130 WRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVP-VFYGDIKVQILNDSHYA-DWVMT 187
Query: 165 RNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHC 224
+ E RH FH+TTWPDFGVP P L+RF+RA R ++ P +VHC
Sbjct: 188 EFMLCRGSEQRILRH---FHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQR--PIVVHC 242
Query: 225 SAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ---A 281
SAG+GRSGTFI +D +L+ I+ + V + I+ MR R+ ++QT Q +Q A
Sbjct: 243 SAGVGRSGTFITLDRILQQINTSDY--VDIFGIVYAMRKERVWMVQTEQQYICIHQCLLA 300
Query: 282 IIEG 285
++EG
Sbjct: 301 VLEG 304
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 145/248 (58%), Gaps = 13/248 (5%)
Query: 42 DDAKRSENRHLNRYRDVIPYDHSRIALKRCS----NDYINANLVEIEQANRKYILTQGPL 97
D AK ENR+ NRY ++I YDHSR+ L +DYINAN ++ R YI TQGP+
Sbjct: 40 DTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPM 99
Query: 98 PNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEV 157
T+ FW M+W++N +IVM+ ++E ++KC +YWP + + D+ +++ +++E
Sbjct: 100 QETVKDFWRMIWQENSASIVMVTNLVEVGRVKCVRYWPDDTEV---YGDIKVTL-IETEP 155
Query: 158 NHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENM 217
Y I R V K + R + LFH+T+WPD GVP T LL F+R V+ +
Sbjct: 156 LAEYVI-RTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPE--A 212
Query: 218 GPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
GP +VHCSAG GR+G FI +D +L + + + V + + E+R R+ L+QT +Q F
Sbjct: 213 GPIVVHCSAGAGRTGCFIAIDTMLDMAENEGV--VDIFNCVRELRAQRVNLVQTEEQYVF 270
Query: 278 SYQAIIEG 285
+ AI+E
Sbjct: 271 VHDAILEA 278
>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
Length = 278
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 143/248 (57%), Gaps = 13/248 (5%)
Query: 42 DDAKRSENRHLNRYRDVIPYDHSRIALKR----CSNDYINANLVEIEQANRKYILTQGPL 97
D AK+ ENR NRY ++I YDHSR+ L+ ++DYIN N ++ YI TQGP+
Sbjct: 38 DSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPM 97
Query: 98 PNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEV 157
TI FW MVW +N +I+M+ ++E ++KC +YWP + + D+ +++ +++E+
Sbjct: 98 QETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEI---YKDIKVTL-IETEL 153
Query: 158 NHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENM 217
Y I R V + + R + FH+T WPD GVP T LL F+R V+ +
Sbjct: 154 LAEYVI-RTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSP--PSA 210
Query: 218 GPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
GP +VHCSAG GR+G FI++D +L + + V + + E+R R+ ++QT +Q F
Sbjct: 211 GPLVVHCSAGAGRTGCFIVIDIMLDMAEREGV--VDIYNCVRELRSRRVNMVQTEEQYVF 268
Query: 278 SYQAIIEG 285
+ AI+E
Sbjct: 269 IHDAILEA 276
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 145/252 (57%), Gaps = 14/252 (5%)
Query: 40 TLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS----NDYINANLVEIEQANRKYILTQG 95
T + A + EN+ NRY +++PYDHSR+ L +DYINA+ + Q K+I QG
Sbjct: 46 TCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFINGYQEKNKFIAAQG 105
Query: 96 PLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSS---SDLEFPDVNLSVH 152
P T+ FW M+WEQN IVM+ + E+ + KC+QYWP ++ +++V
Sbjct: 106 PKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWPDQGCWTYGNVRVSVEDVTVL 165
Query: 153 LDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGA 212
+D V + I + VT+++ +R + FH+T+WPDFGVP +P +L+F++ V+
Sbjct: 166 VDYTV-RKFCIQQVGDVTNRKP--QRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNP 222
Query: 213 LDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTP 272
+ G +VHCSAG+GR+GTF+++D +L ++ V V + +R R ++QT
Sbjct: 223 --QYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSER--KVDVYGFVSRIRAQRCQMVQTD 278
Query: 273 DQLRFSYQAIIE 284
Q F YQA++E
Sbjct: 279 MQYVFIYQALLE 290
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 152/296 (51%), Gaps = 34/296 (11%)
Query: 4 TREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDH 63
R+K I E+EDI +N T + N NRY DV D
Sbjct: 22 ARQKQGIYEEYEDIRRENPVG---------------TFHCSMSPGNLEKNRYGDVPCLDQ 66
Query: 64 SRIALKRCSN----DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVML 119
+R+ L + S DYINA+ ++ + YI TQGPL NT FW+MVWEQ IVM
Sbjct: 67 TRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMT 126
Query: 120 NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERH 179
+ E + KC QYWP S + F + ++ +L E N +++ + + + E ++R
Sbjct: 127 TRFEEGGRRKCGQYWPLEKDSRIRFGFLTVT-NLGVE-NMNHYKKTTLEIHNTEERQKRQ 184
Query: 180 VILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALD-ENMG---------PPI-VHCSAGI 228
V F + +WPD+GVP S +L+ F+R VR +L NMG PPI VHCSAGI
Sbjct: 185 VTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGI 244
Query: 229 GRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
GR+GTF +D L + E+ ++V + + MR R IQTP+Q F Y+AI+E
Sbjct: 245 GRTGTFCSLDICLAQLE--ELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILE 298
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 140/250 (56%), Gaps = 14/250 (5%)
Query: 40 TLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANR----KYILTQG 95
T+ AK +N NRYRD+ PYD +R+ LK + DYINAN + +E + +YI QG
Sbjct: 62 TMSCAKLPQNISKNRYRDISPYDATRVILKG-NEDYINANYINMEIPSSSIINQYIACQG 120
Query: 96 PLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDS 155
PLP+T FW M WEQ +VML +E+ ++KC QYWP + S + ++ H S
Sbjct: 121 PLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSS-SYGCYQVTCH--S 177
Query: 156 EVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDE 215
E ++ +I R + + ++E ++ R + Y WPD GVP + L F+ VR A E
Sbjct: 178 EEGNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKE 237
Query: 216 NMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINN-VSVQEILLEMRHYRMGLIQTPDQ 274
P +VHCSAGIGR+G I ++ + LI E N V +I+ MR R +IQTP Q
Sbjct: 238 E--PVVVHCSAGIGRTGVLITMETAMCLI---ECNQPVYPLDIVRTMRDQRAMMIQTPSQ 292
Query: 275 LRFSYQAIIE 284
RF +AI++
Sbjct: 293 YRFVCEAILK 302
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 143/240 (59%), Gaps = 15/240 (6%)
Query: 49 NRHLNRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRKYILTQGPLPNTIAHF 104
NR NRY +++PYD SR+ L + DYINAN + + ++YI TQGPLP T F
Sbjct: 51 NRCKNRYTNILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDF 110
Query: 105 WVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFIT 164
W MV +Q + IVML + EK ++KC YWP + + + D+ +V + SE +
Sbjct: 111 WKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEEP-IAYGDI--TVEMISEEEQDDWAC 167
Query: 165 RNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTA--LLRFIRAVRKSGALDENMGPPIV 222
R+ R+ + ++ V+ F+YT WPD GVP + A +L+F+ VR+ ++ GP I+
Sbjct: 168 RHFRINYADEMQD--VMHFNYTAWPDHGVPTANAAESILQFVHMVRQQAT--KSKGPMII 223
Query: 223 HCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
HCSAG+GR+GTFI +D +L+ I D E V + ++ EMR YRM ++QT +Q F +Q +
Sbjct: 224 HCSAGVGRTGTFIALDRLLQHIRDHEF--VDILGLVSEMRSYRMSMVQTEEQYIFIHQCV 281
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 13/248 (5%)
Query: 42 DDAKRSENRHLNRYRDVIPYDHSRIALKRC----SNDYINANLVEIEQANRKYILTQGPL 97
D AK+ +NR NRY ++I YDHSR+ L+ S+DYINAN ++ Q YI TQGP+
Sbjct: 62 DVAKKDQNRAKNRYGNIIAYDHSRVILQPVEDDPSSDYINANYIDGYQRPSHYIATQGPV 121
Query: 98 PNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEV 157
T+ FW M+W++ IVM+ ++E ++KC +YWP + +F + + +E
Sbjct: 122 HETVYDFWRMIWQEQSACIVMVTNLVEVGRVKCYKYWPDDTEVYGDFKVTCVEMEPLAE- 180
Query: 158 NHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENM 217
++ R + + ++ R V FH+T WPD GVP T LL FIR V+ S +
Sbjct: 181 ----YVVRTFTLERRGYNEIREVKQFHFTGWPDHGVPYHATGLLSFIRRVKLSNP--PSA 234
Query: 218 GPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
GP +VHCSAG GR+G +I++D +L + + V + + +R R+ ++QT +Q F
Sbjct: 235 GPIVVHCSAGAGRTGCYIVIDIMLDMAEREGV--VDIYNCVKALRSRRINMVQTEEQYIF 292
Query: 278 SYQAIIEG 285
+ AI+E
Sbjct: 293 IHDAILEA 300
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 150/262 (57%), Gaps = 16/262 (6%)
Query: 40 TLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CSNDYINANLVEIEQANRKYILTQ 94
T + A + ENR NRY +++P DHSR+ L + CS DYINA+ ++ + K+I Q
Sbjct: 45 TFELANKEENREKNRYPNILPNDHSRVILSQLDGIPCS-DYINASYIDGYKEKNKFIAAQ 103
Query: 95 GPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLD 154
GP T+ FW MVWEQ IVML + E+ + KC QYWP + ++ + V D
Sbjct: 104 GPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCHQYWPDQGC--WTYGNIRVCVE-D 160
Query: 155 SEVNHSYFITR-NIRVTDKESSKE-RHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGA 212
V Y I + I+ + K R V H+T+WPDFGVP +P +L+F++ V+
Sbjct: 161 CVVLVDYTIRKFCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNP 220
Query: 213 LDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTP 272
+ + GP +VHCSAG+GR+GTFI++D ++ ++ + V V E + +R+ R ++QT
Sbjct: 221 V--HAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQ--KVDVFEFVSRIRNQRPQMVQTD 276
Query: 273 DQLRFSYQAIIE-GIHTDWETD 293
Q F YQA++E ++ D E D
Sbjct: 277 MQYTFIYQALLEYYLYGDTELD 298
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 129/238 (54%), Gaps = 16/238 (6%)
Query: 54 RYRDVIPYDHSRI--ALKRCS--NDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVW 109
R +IPYD +R+ ++KR DYINA+ ++ + +I TQGPL +T+ FW M+W
Sbjct: 351 RVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIW 410
Query: 110 EQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVN----HSYFITR 165
E IVML ++ E+ Q KC QYWPT S + ++ + + D+ + +T
Sbjct: 411 EWKSHTIVMLTEVQEREQDKCYQYWPTEGS--VTHGEITIEIKNDTLSEAISIRDFLVTL 468
Query: 166 NIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCS 225
N + ++ + R V FH+ WP+ G+P ++ I AV+K N P VHCS
Sbjct: 469 N-QPQARQGEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNH-PITVHCS 526
Query: 226 AGIGRSGTFILVDCVLKLI-SDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
AG GR+GTFI + +L+ + ++G ++ V + + +R R ++QT +Q F Y+ +
Sbjct: 527 AGAGRTGTFIALSNILERVKAEGLLD---VFQAVKSLRLQRPHMVQTLEQYEFCYKVV 581
>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
Length = 295
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 143/240 (59%), Gaps = 15/240 (6%)
Query: 49 NRHLNRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRKYILTQGPLPNTIAHF 104
NR NRY +++PYD SR+ L + DYINAN + + ++YI TQGPLP T F
Sbjct: 49 NRCKNRYTNILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDF 108
Query: 105 WVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFIT 164
W MV +Q + IVML + EK ++KC YWP + + + D+ +V + SE +
Sbjct: 109 WKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEEP-IAYGDI--TVEMISEEEQDDWAC 165
Query: 165 RNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTA--LLRFIRAVRKSGALDENMGPPIV 222
R+ R+ + ++ V+ F+YT WPD GVP + A +L+F+ VR+ ++ GP I+
Sbjct: 166 RHFRINYADEMQD--VMHFNYTAWPDHGVPTANAAESILQFVHMVRQQAT--KSKGPMII 221
Query: 223 HCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
HCSAG+GR+GTFI +D +L+ I D E V + ++ EMR YRM ++QT +Q F +Q +
Sbjct: 222 HCSAGVGRTGTFIALDRLLQHIRDHEF--VDILGLVSEMRSYRMSMVQTEEQYIFIHQCV 279
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 139/251 (55%), Gaps = 13/251 (5%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALK----RCSNDYINAN-LVEIEQANRKYILTQGPLP 98
A+R EN NR V+ YDHSR+ LK +DYINA+ +++ + N YI TQGPLP
Sbjct: 52 AQREENVPKNRSLAVLTYDHSRVLLKAENSHSHSDYINASPIMDHDPRNPAYIATQGPLP 111
Query: 99 NTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNL-SVHLDSEV 157
T+A FW MVWE C IVML + E +C YWP S+ +VNL S H+ E
Sbjct: 112 ATVADFWQMVWESGCVVIVMLTPLAENGVRQCYHYWPDEGSNLYHIYEVNLVSEHIWCED 171
Query: 158 NHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENM 217
F+ R+ + + ++++ R V FH+ +W D GVP S +LL F R V K
Sbjct: 172 ----FLVRSFYLKNLQTNETRTVTQFHFLSWYDRGVPSSSRSLLDFRRKVNK--CYRGRS 225
Query: 218 GPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
P IVHCS G GRSGT++L+D VL ++ G + + L +R R G++QT +Q F
Sbjct: 226 CPIIVHCSDGAGRSGTYVLIDMVLNKMAKGA-KEIDIAATLEHLRDQRPGMVQTKEQFEF 284
Query: 278 SYQAIIEGIHT 288
+ A+ E ++
Sbjct: 285 ALTAVAEEVNA 295
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 129/242 (53%), Gaps = 10/242 (4%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRK--YILTQGPLPNTI 101
+ ENR NRY++++PYD +R+ L YINA+ ++I + YI QGPLP T+
Sbjct: 70 GQTKENRRKNRYKNILPYDATRVPLGD-EGGYINASFIKIPVGKEEFVYIACQGPLPTTV 128
Query: 102 AHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSY 161
FW M+WEQ I M+ + +E ++KC +YWP + L + L
Sbjct: 129 GDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSN-RLRLALVRMQQLKG 187
Query: 162 FITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPI 221
F+ R + + D ++ + RH+ ++T WPD P P LL FI +R GP I
Sbjct: 188 FVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYMRHI----HRSGPII 243
Query: 222 VHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQA 281
HCSAGIGRSGT I +D VL LIS + + +++ MR R G++QT DQ F YQ
Sbjct: 244 THCSAGIGRSGTLICIDVVLGLISQDL--DFDISDLVRCMRLQRHGMVQTEDQYIFCYQV 301
Query: 282 II 283
I+
Sbjct: 302 IL 303
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 140/255 (54%), Gaps = 13/255 (5%)
Query: 40 TLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN----DYINAN-LVEIEQANRKYILTQ 94
T A+ N NR+ D +PYDH+RI LK S+ DYINA+ ++E + YI TQ
Sbjct: 47 TCATAQGEGNIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQ 106
Query: 95 GPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNL-SVHL 153
GPL +TIA FW MVWE C IVML ++E +C +YWP +S +VNL S H+
Sbjct: 107 GPLSHTIADFWQMVWESGCTVIVMLTPLVEDGVKQCDRYWPDEGASLYHVYEVNLVSEHI 166
Query: 154 DSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGAL 213
E F+ R+ + + ++ + R + FH+ +WP G P S LL F R V K
Sbjct: 167 WCED----FLVRSFYLKNVQTQETRTLTQFHFLSWPAEGTPASTRPLLDFRRKVNK--CY 220
Query: 214 DENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPD 273
P IVHCS G GR+GT+IL+D VL ++ G + + + L +R R GL+++ D
Sbjct: 221 RGRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKG-VKEIDIAATLEHVRDQRPGLVRSKD 279
Query: 274 QLRFSYQAIIEGIHT 288
Q F+ A+ E ++
Sbjct: 280 QFEFALTAVAEEVNA 294
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 139/250 (55%), Gaps = 25/250 (10%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALKRCSNDYINANLV--EIEQAN--RKYILTQGPLPN 99
AK +N NRY+DV+PYD +R+ L+ + DYINA+ V EI AN KYI TQGPLP+
Sbjct: 39 AKLPQNLDKNRYKDVLPYDTTRVLLQG-NEDYINASYVNMEIPAANLVNKYIATQGPLPH 97
Query: 100 TIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDV----NLSVHLDS 155
T A FW +VW+Q IVML + E+ + KC QYWP + PDV + S
Sbjct: 98 TCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWP-------DPPDVMNHGGFHIQCQS 150
Query: 156 EVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDE 215
E +++R + VT+ ++ +E V Y WPD GVP + L F+ VR +L
Sbjct: 151 EDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVR---SLRV 207
Query: 216 NMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQ--EILLEMRHYRMGLIQTPD 273
+ P +VHCSAGIGR+G + ++ + L N+ + +I+ +MR R ++QT
Sbjct: 208 DSEPVLVHCSAGIGRTGVLVTMETAMCLTE----RNLPIYPLDIVRKMRDQRAMMVQTSS 263
Query: 274 QLRFSYQAII 283
Q +F +AI+
Sbjct: 264 QYKFVCEAIL 273
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 133/246 (54%), Gaps = 11/246 (4%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALKRCSND----YINANLVEIEQANRKYILTQGPLPN 99
A++ +N NRY+D++PYD+SR+ L ++D YINAN ++ + YI TQGPL
Sbjct: 49 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLST 108
Query: 100 TIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNH 159
T+ FW M+WE + IVM E + KC +YW LEF SV ++E
Sbjct: 109 TLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGP--FSVSCEAEKRK 166
Query: 160 SYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGP 219
S +I R ++V K +S+ R + FHY WPD VP S +L I VR +++ P
Sbjct: 167 SDYIIRTLKV--KFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVR--CYQEDDSVP 222
Query: 220 PIVHCSAGIGRSGTFILVDCVLKLISDGEI-NNVSVQEILLEMRHYRMGLIQTPDQLRFS 278
+HCSAG GR+G +D L+ DG I N SV ++ EMR R L+QT +Q
Sbjct: 223 ICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELV 282
Query: 279 YQAIIE 284
Y A++E
Sbjct: 283 YNAVLE 288
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 133/246 (54%), Gaps = 11/246 (4%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALKRCSND----YINANLVEIEQANRKYILTQGPLPN 99
A++ +N NRY+D++PYD+SR+ L ++D YINAN ++ + YI TQGPL
Sbjct: 49 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLST 108
Query: 100 TIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNH 159
T+ FW M+WE + IVM E + KC +YW LEF SV ++E
Sbjct: 109 TLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGP--FSVSCEAEKRK 166
Query: 160 SYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGP 219
S +I R ++V K +S+ R + FHY WPD VP S +L I VR +++ P
Sbjct: 167 SDYIIRTLKV--KFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVR--CYQEDDSVP 222
Query: 220 PIVHCSAGIGRSGTFILVDCVLKLISDGEI-NNVSVQEILLEMRHYRMGLIQTPDQLRFS 278
+HCSAG GR+G +D L+ DG I N SV ++ EMR R L+QT +Q
Sbjct: 223 ICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELV 282
Query: 279 YQAIIE 284
Y A++E
Sbjct: 283 YNAVLE 288
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 134/251 (53%), Gaps = 11/251 (4%)
Query: 39 YTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSND----YINANLVEIEQANRKYILTQ 94
Y A++ +N NRY+D++PYD+SR+ L ++D YINAN ++ + YI TQ
Sbjct: 63 YPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQ 122
Query: 95 GPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLD 154
GPL T+ FW M+WE + IVM E + KC +YW LEF SV +
Sbjct: 123 GPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGP--FSVSCE 180
Query: 155 SEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALD 214
+E S +I R ++V K +S+ R + FHY WPD VP S +L I VR +
Sbjct: 181 AEKRKSDYIIRTLKV--KFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVR--CYQE 236
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI-NNVSVQEILLEMRHYRMGLIQTPD 273
++ P +HCSAG GR+G +D L+ DG I N SV ++ EMR R L+QT +
Sbjct: 237 DDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQE 296
Query: 274 QLRFSYQAIIE 284
Q Y A++E
Sbjct: 297 QYELVYNAVLE 307
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 22/308 (7%)
Query: 43 DAKRSENRHLNRYRDVIPYDHSRIALK-RCSN----DYINAN-----LVEIEQANRKYIL 92
+ +R EN+ NRY++++P+DHSR+ L+ R SN DYINAN L+ ++ + YI
Sbjct: 264 EGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIA 323
Query: 93 TQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVH 152
+QG L T+ FW M W++N + IVM + +EK + KC YWP P SV
Sbjct: 324 SQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP---YSVT 380
Query: 153 LDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSG 211
E + + + R ++V+ ++ R + + Y +WPD GVP P +L F+ + +
Sbjct: 381 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 440
Query: 212 ALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRHYRMGLIQ 270
+ GP IVH SAGIGR+GT I++D +++ IS ++ ++ +Q+ + +R R G++Q
Sbjct: 441 ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 500
Query: 271 TPDQLRFSYQAIIEGIHTDWETDDEFFVFHSDSSLINGNGSTAGVTNNNPRKRKTEEKAE 330
T Q +F Y AI + I T T + V S G S G P + KA
Sbjct: 501 TEAQYKFIYVAIAQFIET---TKKKLEVLQSQ----KGQESEYGNITYPPAMKNAHAKAS 553
Query: 331 RIAEKVKQ 338
R + K K+
Sbjct: 554 RTSSKHKE 561
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 15/258 (5%)
Query: 43 DAKRSENRHLNRYRDVIPYDHSRIALK-RCSN----DYINAN-----LVEIEQANRKYIL 92
+ +R EN+ NRY++++P+DHSR+ L+ R SN DYINAN L+ ++ + YI
Sbjct: 264 EGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIA 323
Query: 93 TQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVH 152
+QG L T+ FW M W++N + IVM + +EK + KC YWP P SV
Sbjct: 324 SQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP---YSVT 380
Query: 153 LDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSG 211
E + + + R ++V+ ++ R + + Y +WPD GVP P +L F+ + +
Sbjct: 381 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 440
Query: 212 ALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRHYRMGLIQ 270
+ GP IVHCSAGIGR+GT I++D +++ IS ++ ++ +Q+ + +R R G++Q
Sbjct: 441 ESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 500
Query: 271 TPDQLRFSYQAIIEGIHT 288
T Q +F Y AI + I T
Sbjct: 501 TEAQYKFIYVAIAQFIET 518
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 15/258 (5%)
Query: 43 DAKRSENRHLNRYRDVIPYDHSRIALK-RCSN----DYINAN-----LVEIEQANRKYIL 92
+ +R EN+ NRY++++P+DHSR+ L+ R SN DYINAN L+ ++ + YI
Sbjct: 22 EGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIA 81
Query: 93 TQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVH 152
+QG L T+ FW M W++N + IVM + +EK + KC YWP P SV
Sbjct: 82 SQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP---YSVT 138
Query: 153 LDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSG 211
E + + + R ++V+ ++ R + + Y +WPD GVP P +L F+ + +
Sbjct: 139 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 198
Query: 212 ALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRHYRMGLIQ 270
+ GP IVHCSAGIGR+GT I++D +++ IS ++ ++ +Q+ + +R R G++Q
Sbjct: 199 ESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 258
Query: 271 TPDQLRFSYQAIIEGIHT 288
T Q +F Y AI + I T
Sbjct: 259 TEAQYKFIYVAIAQFIET 276
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 15/258 (5%)
Query: 43 DAKRSENRHLNRYRDVIPYDHSRIALK-RCSN----DYINAN-----LVEIEQANRKYIL 92
+ +R EN+ NRY++++P+DHSR+ L+ R SN DYINAN L+ ++ + YI
Sbjct: 44 EGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIA 103
Query: 93 TQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVH 152
+QG L T+ FW M W++N + IVM + +EK + KC YWP P SV
Sbjct: 104 SQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP---YSVT 160
Query: 153 LDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSG 211
E + + + R ++V+ ++ R + + Y +WPD GVP P +L F+ + +
Sbjct: 161 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 220
Query: 212 ALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRHYRMGLIQ 270
+ GP IVHCSAGIGR+GT I++D +++ IS ++ ++ +Q+ + +R R G++Q
Sbjct: 221 ESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 280
Query: 271 TPDQLRFSYQAIIEGIHT 288
T Q +F Y AI + I T
Sbjct: 281 TEAQYKFIYVAIAQFIET 298
>pdb|3B7O|A Chain A, Crystal Structure Of The Human Tyrosine Phosphatase Shp2
(Ptpn11) With An Accessible Active Site
Length = 316
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Query: 39 YTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS-----NDYINANLVEIE--------Q 85
Y+ + +R EN++ NRY++++P+DH+R+ L +DYINAN++ E +
Sbjct: 50 YSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSK 109
Query: 86 ANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFP 145
+ YI TQG L NT+ FW MV+++N + IVM K +E+ + KC +YWP + L+
Sbjct: 110 PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYA--LKEY 167
Query: 146 DVNLSVHLDSEVNHSYFITRNIRVTD-KESSKERHVILFHYTTWPDFGVPQSPTALLRFI 204
V ++ H Y + R ++++ + + ER V +H+ TWPD GVP P +L F+
Sbjct: 168 GVMRVRNVKESAAHDYTL-RELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFL 226
Query: 205 RAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRH 263
V + GP +VHCSAGIGR+GTFI++D ++ +I + ++ ++ V + + +R
Sbjct: 227 EEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRS 286
Query: 264 YRMGLIQTPDQLRFSYQAIIEGIHT 288
R G++QT Q RF Y A+ I T
Sbjct: 287 QRSGMVQTEAQYRFIYMAVQHYIET 311
>pdb|3O5X|A Chain A, Crystal Structure Of The Oncogenic Tyrosine Phosphatase
Shp2 Complexed With A Salicylic Acid-Based Small
Molecule Inhibitor
pdb|3MOW|A Chain A, Crystal Structure Of Shp2 In Complex With A Tautomycetin
Analog Ttn D- 1
Length = 276
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Query: 39 YTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS-----NDYINANLVEIE--------Q 85
Y+ + +R EN++ NRY++++P+DH+R+ L +DYINAN++ E +
Sbjct: 3 YSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSK 62
Query: 86 ANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFP 145
+ YI TQG L NT+ FW MV+++N + IVM K +E+ + KC +YWP + L+
Sbjct: 63 PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYA--LKEY 120
Query: 146 DVNLSVHLDSEVNHSYFITRNIRVTD-KESSKERHVILFHYTTWPDFGVPQSPTALLRFI 204
V ++ H Y + R ++++ + + ER V +H+ TWPD GVP P +L F+
Sbjct: 121 GVMRVRNVKESAAHDYTL-RELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFL 179
Query: 205 RAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRH 263
V + GP +VHCSAGIGR+GTFI++D ++ +I + ++ ++ V + + +R
Sbjct: 180 EEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRS 239
Query: 264 YRMGLIQTPDQLRFSYQAIIEGIHT 288
R G++QT Q RF Y A+ I T
Sbjct: 240 QRSGMVQTEAQYRFIYMAVQHYIET 264
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 133/251 (52%), Gaps = 11/251 (4%)
Query: 39 YTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSND----YINANLVEIEQANRKYILTQ 94
Y A++ +N NRY+D++PYD+SR+ L ++D YINAN ++ + YI TQ
Sbjct: 63 YPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQ 122
Query: 95 GPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLD 154
GPL T+ FW M+WE + IVM E + KC +YW LEF SV +
Sbjct: 123 GPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGP--FSVSCE 180
Query: 155 SEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALD 214
+E S +I R ++V K +S+ R + FHY WPD VP S +L I VR +
Sbjct: 181 AEKRKSDYIIRTLKV--KFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVR--CYQE 236
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI-NNVSVQEILLEMRHYRMGLIQTPD 273
++ P +H SAG GR+G +D L+ DG I N SV ++ EMR R L+QT +
Sbjct: 237 DDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQE 296
Query: 274 QLRFSYQAIIE 284
Q Y A++E
Sbjct: 297 QYELVYNAVLE 307
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 146/258 (56%), Gaps = 15/258 (5%)
Query: 43 DAKRSENRHLNRYRDVIPYDHSRIALK-RCSN----DYINAN-----LVEIEQANRKYIL 92
+ +R EN+ NRY++++P+DHSR+ L+ R SN DYINAN L+ ++ + YI
Sbjct: 24 EGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIA 83
Query: 93 TQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVH 152
+QG L T+ FW M W++N + IVM + +EK + KC YWP P SV
Sbjct: 84 SQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP---YSVT 140
Query: 153 LDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSG 211
E + + + R ++V+ ++ R + + Y +WPD GVP P +L F+ + +
Sbjct: 141 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 200
Query: 212 ALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRHYRMGLIQ 270
+ GP IVH SAGIGR+GT I++D +++ IS ++ ++ +Q+ + +R R G++Q
Sbjct: 201 ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 260
Query: 271 TPDQLRFSYQAIIEGIHT 288
T Q +F Y AI + I T
Sbjct: 261 TEAQYKFIYVAIAQFIET 278
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 146/258 (56%), Gaps = 15/258 (5%)
Query: 43 DAKRSENRHLNRYRDVIPYDHSRIALK-RCSN----DYINAN-----LVEIEQANRKYIL 92
+ +R EN+ NRY++++P+DHSR+ L+ R SN DYINAN L+ ++ + YI
Sbjct: 22 EGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIA 81
Query: 93 TQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVH 152
+QG L T+ FW M W++N + IVM + +EK + KC YWP P SV
Sbjct: 82 SQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGP---YSVT 138
Query: 153 LDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSG 211
E + + + R ++V+ ++ R + + Y +WPD GVP P +L F+ + +
Sbjct: 139 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 198
Query: 212 ALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRHYRMGLIQ 270
+ GP IVH SAGIGR+GT I++D +++ IS ++ ++ +Q+ + +R R G++Q
Sbjct: 199 ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 258
Query: 271 TPDQLRFSYQAIIEGIHT 288
T Q +F Y AI + I T
Sbjct: 259 TEAQYKFIYVAIAQFIET 276
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 151/265 (56%), Gaps = 18/265 (6%)
Query: 39 YTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS-----NDYINANLVEIE--------Q 85
Y+ + +R EN++ NRY++++P+DH+R+ L +DYINAN++ E +
Sbjct: 263 YSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSK 322
Query: 86 ANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFP 145
+ YI TQG L NT+ FW MV+++N + IVM K +E+ + KC +YWP + L+
Sbjct: 323 PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYA--LKEY 380
Query: 146 DVNLSVHLDSEVNHSYFITRNIRVTD-KESSKERHVILFHYTTWPDFGVPQSPTALLRFI 204
V ++ H Y + R ++++ + + ER V +H+ TWPD GVP P +L F+
Sbjct: 381 GVMRVRNVKESAAHDYTL-RELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFL 439
Query: 205 RAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSVQEILLEMRH 263
V + GP +VHCSAGIGR+GTFI++D ++ +I + ++ ++ V + + +R
Sbjct: 440 EEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRS 499
Query: 264 YRMGLIQTPDQLRFSYQAIIEGIHT 288
R G++QT Q R Y A+ I T
Sbjct: 500 QRSGMVQTEAQYRSIYMAVQHYIET 524
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 131/246 (53%), Gaps = 11/246 (4%)
Query: 44 AKRSENRHLNRYRDVIPYDHSRIALKRCSND----YINANLVEIEQANRKYILTQGPLPN 99
A++ +N NRY+D++PYD+SR+ L ++D YINAN ++ + YI TQGPL
Sbjct: 49 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLST 108
Query: 100 TIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNH 159
T+ FW M+WE + IVM E + KC +YW LEF SV ++E
Sbjct: 109 TLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGP--FSVSCEAEKRK 166
Query: 160 SYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGP 219
S +I R ++V K +S+ R + FHY WP VP S +L I VR +++ P
Sbjct: 167 SDYIIRTLKV--KFNSETRTIYQFHYKNWPAHDVPSSIDPILELIWDVR--CYQEDDSVP 222
Query: 220 PIVHCSAGIGRSGTFILVDCVLKLISDGEI-NNVSVQEILLEMRHYRMGLIQTPDQLRFS 278
+H SAG GR+G +D L+ DG I N SV ++ EMR R L+QT +Q
Sbjct: 223 ICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELV 282
Query: 279 YQAIIE 284
Y A++E
Sbjct: 283 YNAVLE 288
>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
Length = 610
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 133/250 (53%), Gaps = 9/250 (3%)
Query: 39 YTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSND----YINANLVEIEQANRKYILTQ 94
+ + +A++ N++ NRY D++PYD++R+ L + D YINA+ ++ + RKYI Q
Sbjct: 44 FPIKEARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYIDGFKEPRKYIAAQ 103
Query: 95 GPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLD 154
GP T+ FW +WEQ IV + + E N+ KC++YWP+ F DV + ++
Sbjct: 104 GPRDETVDDFWRXIWEQKATVIVXVTRCEEGNRNKCAEYWPSXEEGTRAFGDVVVKINQH 163
Query: 155 SEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALD 214
Y I + V KE + R V +T+WPD GVP+ P LL+ R V
Sbjct: 164 KRCP-DYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNF- 221
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQ 274
GP +VH SAG+GR+GT+I +D L+ + N V V ++++R R +Q Q
Sbjct: 222 -FSGPIVVHSSAGVGRTGTYIGIDAXLEGLEAE--NKVDVYGYVVKLRRQRCLXVQVEAQ 278
Query: 275 LRFSYQAIIE 284
+QA++E
Sbjct: 279 YILIHQALVE 288
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 126/309 (40%), Gaps = 55/309 (17%)
Query: 6 EKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSR 65
E + +E EF+ + S W R + + N + EN+ NR +VIPYD++R
Sbjct: 317 EPSPLEAEFQRLPSYRSW-----RTQHIGN----------QEENKSKNRNSNVIPYDYNR 361
Query: 66 IALKR-----------------------CSNDYINANLVEIEQANRKYILTQGPLPNTIA 102
+ LK + YINA+ + I QGPL TI
Sbjct: 362 VPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINASFIXSYWKPEVXIAAQGPLKETIG 421
Query: 103 HFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYF 162
FW ++++ K IV L ++ +Q C+QYW + + D+ V L S +
Sbjct: 422 DFWQXIFQRKVKVIVXLTELKHGDQEICAQYWGEGKQT---YGDI--EVDLKDTDKSSTY 476
Query: 163 ITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKS--------GALD 214
R + + R V + YT W +P P L+ I+ V++ G
Sbjct: 477 TLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISXIQVVKQKLPQKNSSEGNKH 536
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINN-VSVQEILLEMRHYRMGLIQTPD 273
P ++HC G ++G F +L L+ E V + +++ +R R+G + T +
Sbjct: 537 HKSTPLLIHCRDGSQQTGIFC---ALLNLLESAETEEVVDIFQVVKALRKARLGXVSTFE 593
Query: 274 QLRFSYQAI 282
Q +F Y I
Sbjct: 594 QYQFLYDVI 602
>pdb|2OC3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Protein
Tyrosine Phosphatase Non-Receptor Type 18
Length = 303
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 145/286 (50%), Gaps = 22/286 (7%)
Query: 5 REKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHS 64
RE + EF DI + + TV+ + R EN NRY+DV+PYD +
Sbjct: 25 REGAVLAGEFSDIQACSAAWKADGVCSTVAGS---------RPENVRKNRYKDVLPYDQT 75
Query: 65 RIAL----KRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLN 120
R+ L + +DYIN N + + YI TQGPLP+T+ FW +VWE K I+M
Sbjct: 76 RVILSLLQEEGHSDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKVILMAC 135
Query: 121 KIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHV 180
+ IE + +C +YW L+ +++ + +N + R ++VT ++ S R V
Sbjct: 136 REIENGRKRCERYW-AQEQEPLQTGLFCITLIKEKWLNEDIML-RTLKVTFQKES--RSV 191
Query: 181 ILFHYTTWPDFGVPQSPTALLRFIRAVRK-SGALDENMGPPIVHCSAGIGRSGTFILVDC 239
Y +WPD GVP SP +L + R+ G+ E P VHCSAG GR+G VD
Sbjct: 192 YQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPE---PLCVHCSAGCGRTGVLCTVDY 248
Query: 240 VLKLISDGEI-NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
V +L+ I + S+ +++L+MR R +QT +Q RF Y + +
Sbjct: 249 VRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQ 294
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 11/242 (4%)
Query: 49 NRHLNRYRDVIPYDHSR--IALKRC--SNDYINANLVEIEQANRKYILTQGPLPNTIAHF 104
N NR +IPY+ +R I +KR + DY+NA+ ++ + YI +QGPL +TI F
Sbjct: 9 NMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGPLLHTIEDF 68
Query: 105 WVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFIT 164
W M+WE +IVML ++ E+ Q KC+QYWP S + + D+ +V L E +
Sbjct: 69 WRMIWEWKSCSIVMLTELEERGQEKCAQYWP--SDGLVSYGDI--TVELKKEEECESYTV 124
Query: 165 RNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHC 224
R++ VT+ +K R + FH+ WP+ G+P ++ I AV+K N P VHC
Sbjct: 125 RDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQQSGNH-PITVHC 183
Query: 225 SAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
SAG GR+GTF + VL+ + I + V + + +R R ++QT +Q F Y+ + E
Sbjct: 184 SAGAGRTGTFCALSTVLERVKAEGI--LDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQE 241
Query: 285 GI 286
I
Sbjct: 242 YI 243
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 127/237 (53%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+ ++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 72 DRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 131
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 132 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 185
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E ++ ILF + WPD P+S LLR + V +S + GP +VHCSAG
Sbjct: 186 TIQYQEERRDVKHILF--SAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAG 243
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+IQT +Q +F + +
Sbjct: 244 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIQTAEQYQFLHHTL 296
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+ ++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 61 DRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 120
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 121 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 174
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E + ILF + WPD P+S LLR + V +S + GP +VHCSAG
Sbjct: 175 TIQYQEERRSVKHILF--SAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAG 232
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+IQT +Q +F + +
Sbjct: 233 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIQTAEQYQFLHHTL 285
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+ ++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 71 DRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 130
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 131 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 184
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E + ILF + WPD P+S LLR + V +S + GP +VHCSAG
Sbjct: 185 TIQYQEERRSVKHILF--SAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAG 242
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+IQT +Q +F + +
Sbjct: 243 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIQTAEQYQFLHHTL 295
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+ ++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 72 DRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 131
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 132 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 185
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E + ILF + WPD P+S LLR + V +S + GP +VHCSAG
Sbjct: 186 TIQYQEERRSVKHILF--SAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAG 243
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+IQT +Q +F + +
Sbjct: 244 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIQTAEQYQFLHHTL 296
>pdb|3D42|A Chain A, Crystal Structure Of Heptp In Complex With A
Monophosphorylated Erk2 Peptide
pdb|3D44|A Chain A, Crystal Structure Of Heptp In Complex With A Dually
Phosphorylated Erk2 Peptide Mimetic
Length = 308
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 126/237 (53%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+D++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 71 DRYKDILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 130
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 131 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 184
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E + ILF + WPD P+S LLR + V +S + GP +VH SAG
Sbjct: 185 TIQYQEERRSVKHILF--SAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAG 242
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+IQT +Q +F + +
Sbjct: 243 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIQTAEQYQFLHHTL 295
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 126/257 (49%), Gaps = 15/257 (5%)
Query: 41 LDDAKRSENRHLNRYRDVIPYDHSRIAL---KRCSNDYINANLVEI--EQANRKYILTQG 95
A EN +R R+V+PY+ +R+ L K + YINA+ +++ A YI TQG
Sbjct: 63 FSTAALPENAERSRIREVVPYEENRVELIPTKENNTGYINASHIKVVVGGAEWHYIATQG 122
Query: 96 PLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDS 155
PLP+T FW MVWEQ I M+ E + K +YWP S V
Sbjct: 123 PLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKHSSATYGKFKVTTKF 182
Query: 156 EVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAV----RKSG 211
+ + T ++V S +ER V YT WPD G P+ L ++ + R +
Sbjct: 183 RTDSVCYATTGLKVKHLLSGQERTVWHLQYTDWPDHGCPEDVQGFLSYLEEIQSVRRHTN 242
Query: 212 ALDE---NMGPPI-VHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG 267
++ E N PPI VHCSAG+GR+G IL + ++ + E V V +L +R RM
Sbjct: 243 SMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHNE--KVEVPMMLRLLREQRMF 300
Query: 268 LIQTPDQLRFSYQAIIE 284
+IQT Q +F YQ +I+
Sbjct: 301 MIQTIAQYKFVYQVLIQ 317
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+ ++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 72 DRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 131
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 132 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 185
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E + ILF + WP P+S LLR + V +S + GP +VHCSAG
Sbjct: 186 TIQYQEERRSVKHILF--SAWPAHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAG 243
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+IQT +Q +F + +
Sbjct: 244 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIQTAEQYQFLHHTL 296
>pdb|2HVL|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant
pdb|2QDP|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant Crystallized In Ammonium Acetate
Length = 309
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+ ++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 72 DRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 131
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 132 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 185
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E + ILF + WPD P+S LLR + V +S + GP +VH SAG
Sbjct: 186 TIQYQEERRSVKHILF--SAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAG 243
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+IQT +Q +F + +
Sbjct: 244 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIQTAEQYQFLHHTL 296
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 132/238 (55%), Gaps = 20/238 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCS-----NDYINANLVEIEQANRK-YILTQGPLPNTIAHFWV 106
NRY+ ++P SR+ L+ + + YINAN + K +I TQGP+ NT+ FW
Sbjct: 60 NRYKTILPNPLSRVCLRPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFWQ 119
Query: 107 MVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRN 166
MVW+++ IVM+ K+ EKN+ KC YWP + V + V +E ++ + RN
Sbjct: 120 MVWQEDSPVIVMITKLKEKNE-KCVLYWPEKRGI---YGKVEVLVTGVTECDN--YTIRN 173
Query: 167 IRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSA 226
+ + K+ S +HV + YT+WPD P S LL+ + V + E GP +VHCSA
Sbjct: 174 LVL--KQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSA 231
Query: 227 GIGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
GIGR+G FI + C +L +G ++ +S I+ ++R R G++QT +Q F + A+
Sbjct: 232 GIGRTGCFIATSIGC-QQLKEEGVVDALS---IVCQLRVDRGGMVQTSEQYEFVHHAL 285
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 132/238 (55%), Gaps = 20/238 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCS-----NDYINANLVEIEQANRK-YILTQGPLPNTIAHFWV 106
NRY+ ++P SR+ L+ + + YINAN + K +I TQGP+ NT+ FW
Sbjct: 47 NRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFWQ 106
Query: 107 MVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRN 166
MVW+++ IVM+ K+ EKN+ KC YWP + V + V +E ++ + RN
Sbjct: 107 MVWQEDSPVIVMITKLKEKNE-KCVLYWPEKRGI---YGKVEVLVISVNECDN--YTIRN 160
Query: 167 IRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSA 226
+ + K+ S +HV + YT+WPD P S LL+ + V + + GP +VHCSA
Sbjct: 161 LVL--KQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSA 218
Query: 227 GIGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
GIGR+G FI + C +L +G ++ +S I+ ++R R G++QT +Q F + A+
Sbjct: 219 GIGRTGCFIATSIGC-QQLKEEGVVDALS---IVCQLRMDRGGMVQTSEQYEFVHHAL 272
>pdb|2QDM|A Chain A, Crystal Structure Of The Heptp Catalytic Domain
C270sD236AQ314A Mutant
Length = 309
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 19/237 (8%)
Query: 53 NRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRK-YILTQGPLPNTIAHFWVM 107
+RY+ ++P SR+ L R + DYINAN + K YI TQGP+PNT++ FW M
Sbjct: 72 DRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEM 131
Query: 108 VWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI 167
VW++ IVML ++ E + KC YWPT + F + + + R +
Sbjct: 132 VWQEEVSLIVMLTQLREGKE-KCVHYWPTEEETYGPF-----QIRIQDMKECPEYTVRQL 185
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
+ +E + ILF + WP P+S LLR + V +S + GP +VH SAG
Sbjct: 186 TIQYQEERRSVKHILF--SAWPAHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAG 243
Query: 228 IGRSGTFIL--VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAI 282
IGR+G FI + C +L + GE++ + I+ ++R R G+I T +Q +F + +
Sbjct: 244 IGRTGCFIATRIGC-QQLKARGEVDILG---IVCQLRLDRGGMIATAEQYQFLHHTL 296
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 25/241 (10%)
Query: 53 NRYRDVIPYDHSRIALKRCSND-----YINANLVEIEQANRK-YILTQGPLPNTIAHFWV 106
NRY+ ++P HSR+ L D YINAN + K YI TQGP+ +T+A FW
Sbjct: 68 NRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWR 127
Query: 107 MVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRN 166
MVW+++ IVM+ I E N+ KC++YWP + + V ++V +V H T +
Sbjct: 128 MVWQEHTPIIVMITNIEEMNE-KCTEYWP---EEQVAYDGVEITVQ---KVIH----TED 176
Query: 167 IR---VTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALD-ENMGPPIV 222
R ++ K ++ER + + +T+WPD P LL +R V ++ + + P IV
Sbjct: 177 YRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIV 236
Query: 223 HCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQA 281
HCSAGIGR+G FI C +L +G ++ + + ++R R G+IQT +Q +F +
Sbjct: 237 HCSAGIGRTGCFIATSICCQQLRQEGVVD---ILKTTCQLRQDRGGMIQTCEQYQFVHHV 293
Query: 282 I 282
+
Sbjct: 294 M 294
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 25/241 (10%)
Query: 53 NRYRDVIPYDHSRIALKRCSND-----YINANLVEIEQANRK-YILTQGPLPNTIAHFWV 106
NRY+ ++P HSR+ L D YINAN + K YI TQGP+ +T+A FW
Sbjct: 68 NRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWR 127
Query: 107 MVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRN 166
MVW+++ IVM+ I E N+ KC++YWP + + V ++V +V H T +
Sbjct: 128 MVWQEHTPIIVMITNIEEMNE-KCTEYWP---EEQVAYDGVEITVQ---KVIH----TED 176
Query: 167 IR---VTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALD-ENMGPPIV 222
R ++ K ++ER + + +T+WPD P LL +R V ++ + + P IV
Sbjct: 177 YRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIV 236
Query: 223 HCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQA 281
H SAGIGR+G FI C +L +G ++ + + ++R R G+IQT +Q +F +
Sbjct: 237 HSSAGIGRTGCFIATSICCQQLRQEGVVD---ILKTTCQLRQDRGGMIQTCEQYQFVHHV 293
Query: 282 I 282
+
Sbjct: 294 M 294
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 25/241 (10%)
Query: 53 NRYRDVIPYDHSRIALKRCSND-----YINANLVEIEQANRK-YILTQGPLPNTIAHFWV 106
NRY+ ++P HSR+ L D YINAN + K YI TQGP+ +T+A FW
Sbjct: 47 NRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWR 106
Query: 107 MVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRN 166
MVW+++ IVM+ I E N+ KC++YWP + + V ++V +V H T +
Sbjct: 107 MVWQEHTPIIVMITNIEEMNE-KCTEYWP---EEQVAYDGVEITVQ---KVIH----TED 155
Query: 167 IR---VTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALD-ENMGPPIV 222
R ++ K ++ER + + +T+WPD P LL +R V ++ + + P IV
Sbjct: 156 YRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIV 215
Query: 223 HCSAGIGRSGTFILVD-CVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQA 281
H SAGIGR+G FI C +L +G ++ + + ++R R G+IQT +Q +F +
Sbjct: 216 HXSAGIGRTGCFIATSICCQQLRQEGVVD---ILKTTCQLRQDRGGMIQTCEQYQFVHHV 272
Query: 282 I 282
+
Sbjct: 273 M 273
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 16/257 (6%)
Query: 44 AKRSENRHLNRYRDVIP-----YDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLP 98
A +NRH NRY D++ Y A + YIN NL++++ + K++ Q P+
Sbjct: 40 ATSLKNRHKNRYLDILANEATLYPQVTDAPGASTPYYINGNLIDLDLPH-KFVACQAPVV 98
Query: 99 NTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT--SSSSDLEFPDVNLSVHLDS- 155
I F M++E+ ++M+ K+ E +K +YWP S S + L++ D
Sbjct: 99 QGIPDFLAMLYEKKISLVIMVTKLEEGGFVKADRYWPEERGSGSIAVSGNCGLTISEDPG 158
Query: 156 ---EVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGA 212
EV ITR + + YT WPD G+PQS T+L + V+ S
Sbjct: 159 KAYEVEDELKITRRYLILQRADEPPHKFTQVQYTGWPDHGIPQSATSLEALLTNVKNS-- 216
Query: 213 LDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTP 272
P +VHCSAGIGR+GT I L + G + + +V +++ MR R G++Q
Sbjct: 217 --PTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMRRQRFGMVQRM 274
Query: 273 DQLRFSYQAIIEGIHTD 289
+Q Y ++ + D
Sbjct: 275 EQYFVIYLTLMCRLGVD 291
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 27/260 (10%)
Query: 48 ENRHLNRYRDVI-------PYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNT 100
+NRH NRY D++ P + + YIN NL++++ + ++ Q P+P
Sbjct: 44 KNRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYINGNLIDLDLPH-TFVACQAPVPQG 102
Query: 101 IAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFP-----------DVNL 149
+ F + E+ +VML K+ E LK +YWP L FP D
Sbjct: 103 VPDFLETLSEKKVDLVVMLTKLREGGVLKAERYWPEEEEDSLSFPESGHDAIKVTRDAEA 162
Query: 150 SVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRK 209
S +D+E++ I R V V+ Y WPD GVP+S + + ++
Sbjct: 163 SYEVDAELD----IVRRPLVIHVPGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKN 218
Query: 210 SGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLI 269
P +VHCSAGIGR+GT I L I G + + +V I+ M+ R G++
Sbjct: 219 C----VTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKRFGMV 274
Query: 270 QTPDQLRFSYQAIIEGIHTD 289
Q +Q Y ++ + D
Sbjct: 275 QRLEQYAVIYMTVLGRLGVD 294
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 64 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 115
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 116 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 171
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPDF V Q+ + S D
Sbjct: 172 LTIREAGQKTISVPVVHVGNWPDFTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 231
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++HC AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 232 DSKLRPVIHCRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 287
Query: 274 QL 275
QL
Sbjct: 288 QL 289
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 42 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 93
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 94 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 149
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPD V Q+ + S D
Sbjct: 150 LTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 209
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++HC AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 210 DSKLRPVIHCRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 265
Query: 274 QL 275
QL
Sbjct: 266 QL 267
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 63 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 114
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 115 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 170
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPD V Q+ + S D
Sbjct: 171 LTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 230
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++HC AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 231 DSKLRPVIHCRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 286
Query: 274 QL 275
QL
Sbjct: 287 QL 288
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 64 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 115
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 116 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 171
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPD V Q+ + S D
Sbjct: 172 LTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 231
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++HC AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 232 DSKLRPVIHCRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 287
Query: 274 QL 275
QL
Sbjct: 288 QL 289
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 64 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 115
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 116 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 171
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPD V Q+ + S D
Sbjct: 172 LTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 231
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++HC AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 232 DSKLRPVIHCRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 287
Query: 274 QL 275
QL
Sbjct: 288 QL 289
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 63 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 114
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 115 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 170
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WP V Q+ + S D
Sbjct: 171 LTIREAGQKTISVPVVHVGNWPAQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 230
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++HC AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 231 DSKLRPVIHCRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 286
Query: 274 QL 275
QL
Sbjct: 287 QL 288
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 64 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 115
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 116 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 171
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H +PD V Q+ + S D
Sbjct: 172 LTIREAGQKTISVPVVHVGNFPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 231
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++HC AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 232 DSKLRPVIHCRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 287
Query: 274 QL 275
QL
Sbjct: 288 QL 289
>pdb|1YTS|A Chain A, A Ligand-Induced Conformational Change In The Yersinia
Protein Tyrosine Phosphatase
Length = 278
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 36 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 87
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 88 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 143
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPD V Q+ + S D
Sbjct: 144 LTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 203
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++H AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 204 DSKLRPVIHSRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 259
Query: 274 QL 275
QL
Sbjct: 260 QL 261
>pdb|1LYV|A Chain A, High-Resolution Structure Of The Catalytically Inactive
Yersinia Tyrosine Phosphatase C403a Mutant In Complex
With Phosphate
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 64 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 115
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 116 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 171
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPD V Q+ + S D
Sbjct: 172 LTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 231
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++H AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 232 DSKLRPVIHSRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 287
Query: 274 QL 275
QL
Sbjct: 288 QL 289
>pdb|1XXP|A Chain A, Yersinia Yoph (Residues 163-468) C403s Binds
Phosphotyrosyl Peptide At Two Sites
pdb|1XXP|B Chain B, Yersinia Yoph (Residues 163-468) C403s Binds
Phosphotyrosyl Peptide At Two Sites
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 34/242 (14%)
Query: 52 LNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQ 111
LNR+RD+ + + +NAN +++ N + I Q PL + + + M+ E
Sbjct: 64 LNRFRDIQCRRQTAVRAD------LNANYIQV--GNTRTIACQYPLQSQLESHFRMLAEN 115
Query: 112 NCKAIVML--NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNI-R 168
+ +L + I + Y+ S + + + + + +V I ++
Sbjct: 116 RTPVLAVLASSSEIANQRFGMPDYFRQSGT----YGSITVESKMTQQVGLGDGIMADMYT 171
Query: 169 VTDKESSKER-HVILFHYTTWPDFG-------------VPQSPTALLRFIRAVRKSGALD 214
+T +E+ ++ V + H WPD V Q+ + S D
Sbjct: 172 LTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVAD 231
Query: 215 ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPD 273
++ P++H AG+GR+ I C ++D + +SV++++ +MR R G ++Q +
Sbjct: 232 DSKLRPVIHSRAGVGRTAQLIGAMC----MNDSRNSQLSVEDMVSQMRVQRNGIMVQKDE 287
Query: 274 QL 275
QL
Sbjct: 288 QL 289
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 181 ILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCV 240
+ H PDF P +P + RF++ V ++ A E +G VHC+ G GR+GT ++ C
Sbjct: 56 LTLHRLRIPDF-CPPAPDQIDRFVQIVDEANARGEAVG---VHCALGFGRTGT--MLACY 109
Query: 241 LKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ 280
L + ++ + + E+R R G I+T +Q + +Q
Sbjct: 110 LV-----KERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 144
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 181 ILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCV 240
+ H PDF P +P + RF++ V ++ A E +G VHC+ G GR+GT + V
Sbjct: 57 LTLHRLRIPDF-CPPAPDQIDRFVQIVDEANARGEAVG---VHCALGFGRTGTXLACYLV 112
Query: 241 LKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ 280
+ ++ + + E+R R G I+T +Q + +Q
Sbjct: 113 KE-------RGLAAGDAIAEIRRLRPGSIETYEQEKAVFQ 145
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 189 PDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGE 248
PD GVP S + L ++ + L E G +VHC GIGR+GT + +L
Sbjct: 68 PDGGVP-SDSQFLTIMKWL-----LSEKEGN-LVHCVGGIGRTGTILASYLILT------ 114
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDW 290
+ V+ + E+R R G +QT +Q F + +EG+ W
Sbjct: 115 -EGLEVESAIDEVRLVRPGAVQTYEQEMFLLR--VEGMRKSW 153
>pdb|1G4U|S Chain S, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp Bound To Rac1
pdb|1G4W|R Chain R, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp
Length = 383
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 98 PNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEV 157
P+ + M+ E+ C +V+L ++Q++ Q P S F +V+ + S
Sbjct: 194 PDALEAHMKMLLEKECSCLVVLT---SEDQMQAKQLPPYFRGS-YTFGEVHTNSQKVSSA 249
Query: 158 NHSYFITR-NIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDEN 216
+ I + N++++ E K + + H WPD S L V+ S ++N
Sbjct: 250 SQGEAIDQYNMQLSCGE--KRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNS---NQN 304
Query: 217 MGP---------PIVHCSAGIGRSGTF 234
P P++HC G+GR+GT
Sbjct: 305 GAPGRSSSDKHLPMIHCLGGVGRTGTM 331
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 189 PDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGE 248
PD GVP S + L ++ + L E G +VH GIGR+GT + +L
Sbjct: 68 PDGGVP-SDSQFLTIMKWL-----LSEKEGN-LVHSVGGIGRTGTILASYLILT------ 114
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDW 290
+ V+ + E+R R G +QT +Q F + +EG+ W
Sbjct: 115 -EGLEVESAIDEVRLVRPGAVQTYEQEMFLLR--VEGMRKSW 153
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 183 FHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLK 242
F Y P +P +P L F K ++ G +VHC+AG+ RS T C+
Sbjct: 70 FEYVKVPLADMPHAPIGLY-FDTVADKIHSVSRKHGATLVHCAAGVSRSATL----CIAY 124
Query: 243 LISDGEINNVSVQE 256
L+ + +NV + E
Sbjct: 125 LM---KFHNVCLLE 135
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 187 TWP-DFGVPQSPTALLRFIRAVRKSGAL---DENMGPPI--VHCSAGIGRSGTFILVDCV 240
+WP D G P + L +++ + A D ++ PP VHC AG+GR+ + + V
Sbjct: 73 SWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALV 132
Query: 241 LKLISDGEINNVSVQEILLEMRHYRMGLI 269
E NVS + + +R R G I
Sbjct: 133 -------EYGNVSALDAIALIREKRKGAI 154
>pdb|3F41|A Chain A, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
pdb|3F41|B Chain B, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
Length = 629
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTA--LLRFIRAVRKSGALDENMGPPIVHCS 225
+V +E ++H + T D P P L F +++ K L HC
Sbjct: 188 KVRTEEEMVKQHGANYFRLTLQDHFRPDDPDVDKFLEFYKSLPKDAWLH-------YHCY 240
Query: 226 AGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLR-FSYQAIIE 284
AG+GR+ F+++ +LK D +++ ++ L+ + + L + PD+ + + +A IE
Sbjct: 241 AGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKLIGI----VDLSEIPDKKKNYGRKAYIE 296
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 214 DENMGPPIVHCSAGIGRSGTFILV 237
D+ P +VHC+AG+ RSG IL
Sbjct: 122 DQRNEPVLVHCAAGVNRSGAXILA 145
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 21/54 (38%)
Query: 218 GPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQT 271
G VHC AG+GR+GT L+ C + M+HYRM +T
Sbjct: 270 GAIAVHCKAGLGRTGT--LIACYI-------------------MKHYRMTAAET 302
>pdb|3UDF|A Chain A, Crystal Structure Of Apo Pbp1a From Acinetobacter
Baumannii
pdb|3UDF|B Chain B, Crystal Structure Of Apo Pbp1a From Acinetobacter
Baumannii
pdb|3UDI|A Chain A, Crystal Structure Of Acinetobacter Baumannii Pbp1a In
Complex With Penicillin G
pdb|3UDI|B Chain B, Crystal Structure Of Acinetobacter Baumannii Pbp1a In
Complex With Penicillin G
pdb|3UDX|A Chain A, Crystal Structure Of Acinetobacter Baumannii Pbp1a In
Complex With Imipenem
pdb|3UDX|B Chain B, Crystal Structure Of Acinetobacter Baumannii Pbp1a In
Complex With Imipenem
pdb|3UE0|A Chain A, Crystal Structure Of Acinetobacter Baumannii Pbp1a In
Complex With Aztreonam
pdb|3UE0|B Chain B, Crystal Structure Of Acinetobacter Baumannii Pbp1a In
Complex With Aztreonam
pdb|3UE1|A Chain A, Crystal Strucuture Of Acinetobacter Baumanni Pbp1a In
Complex With Mc- 1
pdb|3UE1|B Chain B, Crystal Strucuture Of Acinetobacter Baumanni Pbp1a In
Complex With Mc- 1
Length = 731
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 3 ETREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYD 62
E +EKT+ +L + D N QRI S+AYD N RDVI +
Sbjct: 598 EQKEKTTKQLNLKQTDKNNSQYRQAQRILKSSSAYDMA------------NILRDVIEHG 645
Query: 63 HSRIALKRCSND 74
R ALK +D
Sbjct: 646 TGRAALKIGRSD 657
>pdb|1FPZ|A Chain A, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|B Chain B, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|C Chain C, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|D Chain D, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|E Chain E, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|F Chain F, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FQ1|A Chain A, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
Length = 212
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 126 NQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHS-------YFITRN----IRVTDKES 174
+++ CSQ+ + +F DV +V D+E S F TR RV +
Sbjct: 35 SRVNCSQFLGLCALPGCKFKDVRRNVQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLD 94
Query: 175 SKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTF 234
++ I+ H+ D G P + + + +N ++H G+GRS
Sbjct: 95 LYQQCGIITHHHPIADGGTPD----IASCCEIMEELTTCLKNYRKTLIHSYGGLGRS--C 148
Query: 235 ILVDCVLKLISDGEINNVSVQEILLEMRHYR-MGLIQTPDQLRFSYQ 280
++ C+L +SD +S ++ + +R R G IQT Q + ++
Sbjct: 149 LVAACLLLYLSD----TISPEQAIDSLRDLRGSGAIQTIKQYNYLHE 191
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 214 DENMGPPIVHCSAGIGRSGTFIL 236
D+ P +VHC AG+ RSG IL
Sbjct: 101 DQRNEPVLVHCVAGVNRSGAXIL 123
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,983,442
Number of Sequences: 62578
Number of extensions: 405429
Number of successful extensions: 1280
Number of sequences better than 100.0: 127
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 860
Number of HSP's gapped (non-prelim): 139
length of query: 355
length of database: 14,973,337
effective HSP length: 100
effective length of query: 255
effective length of database: 8,715,537
effective search space: 2222461935
effective search space used: 2222461935
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)