RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4348
(355 letters)
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 392 bits (1008), Expect = e-137
Identities = 146/285 (51%), Positives = 194/285 (68%), Gaps = 3/285 (1%)
Query: 5 REKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHS 64
+E EFE ID WA +YQ IR ++ D+ AK +N++ NRYRDV P+DHS
Sbjct: 4 HHHHEMEKEFEQIDKSGSWAAIYQDIRHEAS--DFPCRVAKLPKNKNRNRYRDVSPFDHS 61
Query: 65 RIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIE 124
RI L + NDYINA+L+++E+A R YILTQGPLPNT HFW MVWEQ + +VMLN+++E
Sbjct: 62 RIKLHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVME 121
Query: 125 KNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFH 184
K LKC+QYWP ++ F D NL + L SE SY+ R + + + + + R ++ FH
Sbjct: 122 KGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFH 181
Query: 185 YTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLI 244
YTTWPDFGVP+SP + L F+ VR+SG+L GP +VHCSAGIGRSGTF L D L L+
Sbjct: 182 YTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLM 241
Query: 245 SDGEI-NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
+ ++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 242 DKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKF 286
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 391 bits (1006), Expect = e-137
Identities = 153/281 (54%), Positives = 202/281 (71%), Gaps = 5/281 (1%)
Query: 8 TSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIA 67
T+IE EFE++D++ W +Y IR S+ DY AK ENR+ NRYRDV PYDHSR+
Sbjct: 3 TTIEREFEELDTQRRWQPLYLEIRNESH--DYPHRVAKFPENRNRNRYRDVSPYDHSRVK 60
Query: 68 LKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQ 127
L+ NDYINA+LV+IE+A R YILTQGPLPNT HFW+MVW+Q KA+VMLN+I+EK
Sbjct: 61 LQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKES 120
Query: 128 LKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTT 187
+KC+QYWP + ++ F + SV L SE SY+ +++ + S + R + FHYTT
Sbjct: 121 VKCAQYWP-TDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTT 179
Query: 188 WPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDG 247
WPDFGVP+SP + L F+ VR+SG+L+ + GP ++HCSAGIGRSGTF LVD L L+ G
Sbjct: 180 WPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKG 239
Query: 248 EINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
+ +++++++LL MR YRMGLIQTPDQLRFSY AIIEG
Sbjct: 240 D--DINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKC 278
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 360 bits (926), Expect = e-124
Identities = 103/295 (34%), Positives = 163/295 (55%), Gaps = 11/295 (3%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK---RCSND 74
DS +A Y+ ++ + A+ +ENR NRY +V+PYD SR+ L ++D
Sbjct: 41 DSNCGFAEEYEDLKLIGI--SLPKYAAEIAENRGKNRYNNVLPYDISRVKLSVQTHSTDD 98
Query: 75 YINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYW 134
YINAN + + + +I TQGPLPNT+ FW MVWE+N AIVML K +E+ + KC +YW
Sbjct: 99 YINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYW 158
Query: 135 PTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVP 194
P+ + D +++V + SEV + R+ V + +SS+ + FH+T+WPD GVP
Sbjct: 159 PSKQAQDYG----DITVAMTSEVVLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVP 214
Query: 195 QSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSV 254
+ L+ F VR P +VHCSAG+GR+GTFI +D ++ I + V V
Sbjct: 215 DTTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAIDRLIYQIENEN--TVDV 272
Query: 255 QEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDDEFFVFHSDSSLINGN 309
I+ ++R +R ++QT DQ F Q +++ I ++ + ++ + I N
Sbjct: 273 YGIVYDLRMHRPLMVQTEDQYVFLNQCVLDIIRAQKDSKVDLIYQNTTAMTIYEN 327
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 355 bits (914), Expect = e-123
Identities = 99/272 (36%), Positives = 155/272 (56%), Gaps = 9/272 (3%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSNDYIN 77
DS L + Y+ ++ V + + D A ENR NRY +++PYD +R+ L S DYIN
Sbjct: 24 DSNYLLSKEYEELKDVGR--NQSCDIALLPENRGKNRYNNILPYDATRVKLSGGS-DYIN 80
Query: 78 ANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTS 137
A+ + R+YI+TQGPLP T FW MVWEQN IVM+ + +EK ++KC YWP
Sbjct: 81 ASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPAD 140
Query: 138 SSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVIL-FHYTTWPDFGVPQS 196
S L + D L + + SE + R ++ +E +I FHYT WPD GVP++
Sbjct: 141 QDS-LYYGD--LILQMLSESVLPEWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPET 197
Query: 197 PTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQE 256
+L++F+R VR GP +VHCSAG+GR+GTFI +D +L+ + + +V +
Sbjct: 198 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKD--SVDIYG 255
Query: 257 ILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
+ ++R +R+ ++QT Q + +Q + + +
Sbjct: 256 AVHDLRLHRVHMVQTECQYVYLHQCVRDVLRA 287
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 353 bits (908), Expect = e-122
Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 15/278 (5%)
Query: 13 EFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCS 72
+ + + ++++ + AK +N NRY+DV+PYD +R+ L+
Sbjct: 10 QLKKGLESGTVLIQFEQLYRKKP--GLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNE 67
Query: 73 NDYINANLVEIE----QANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQL 128
DYINA+ V +E KYI TQGPLP+T A FW +VW+Q IVML + E+ +
Sbjct: 68 -DYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRT 126
Query: 129 KCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTW 188
KC QYWP + + SE +++R + VT+ ++ +E V Y W
Sbjct: 127 KCHQYWPDPPDV-MNH--GGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAW 183
Query: 189 PDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGE 248
PD GVP + L F+ VR L + P +VHCSAGIGR+G + ++ + L
Sbjct: 184 PDHGVPDDSSDFLEFVNYVRS---LRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 240
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ +I+ +MR R ++QT Q +F +AI+
Sbjct: 241 --PIYPLDIVRKMRDQRAMMVQTSSQYKFVCEAILRVY 276
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 353 bits (908), Expect = e-122
Identities = 97/287 (33%), Positives = 141/287 (49%), Gaps = 21/287 (7%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN---- 73
K Y+ IR + T + N NRY DV D +R+ L + S
Sbjct: 23 RQKQGIYEEYEDIRRENP--VGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQT 80
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
DYINA+ ++ + YI TQGPL NT FW+MVWEQ IVM + E + KC QY
Sbjct: 81 DYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQY 140
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGV 193
WP S + F L+V N +++ + + + E ++R V F + +WPD+GV
Sbjct: 141 WPLEKDSRIRFGF--LTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGV 198
Query: 194 PQSPTALLRFIRAVRKSGALDENM-----------GPPIVHCSAGIGRSGTFILVDCVLK 242
P S +L+ F+R VR +L + P +VHCSAGIGR+GTF +D L
Sbjct: 199 PSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLA 258
Query: 243 LISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTD 289
+ + ++V + + MR R IQTP+Q F Y+AI+E +
Sbjct: 259 QLEELG--TLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKE 303
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 350 bits (900), Expect = e-121
Identities = 85/274 (31%), Positives = 148/274 (54%), Gaps = 15/274 (5%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CSNDYINANLV 81
++ ++ + + +R EN+ NRY++++P+DHSR+ L+ +DYINAN +
Sbjct: 6 FESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYI 65
Query: 82 -----EIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPT 136
++ + YI +QG L T+ FW M W++N + IVM + +EK + KC YWP
Sbjct: 66 KNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPE 125
Query: 137 SSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFGVPQ 195
+ SV E + + + R ++V+ ++ R + + Y +WPD GVP
Sbjct: 126 VGMQ-RAY--GPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPS 182
Query: 196 SPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-NVSV 254
P +L F+ + + + GP IVH SAGIGR+GT I++D +++ IS ++ ++ +
Sbjct: 183 EPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDI 242
Query: 255 QEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
Q+ + +R R G++QT Q +F Y AI + I T
Sbjct: 243 QKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIET 276
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 351 bits (903), Expect = e-121
Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 27/290 (9%)
Query: 1 MSETREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIP 60
++E ++ +F+ + K T+ AK +N NRYRD+ P
Sbjct: 38 LAEGLITGTVLTQFDQLYRKKP---------------GMTMSCAKLPQNISKNRYRDISP 82
Query: 61 YDHSRIALKRCSNDYINANLVEIEQA----NRKYILTQGPLPNTIAHFWVMVWEQNCKAI 116
YD +R+ LK DYINAN + +E +YI QGPLP+T FW M WEQ +
Sbjct: 83 YDATRVILKGNE-DYINANYINMEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMV 141
Query: 117 VMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK 176
VML +E+ ++KC QYWP + S + V SE ++ +I R + + ++E ++
Sbjct: 142 VMLTTQVERGRVKCHQYWPEPTGS-SSYGC--YQVTCHSEEGNTAYIFRKMTLFNQEKNE 198
Query: 177 ERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
R + Y WPD GVP + L F+ VR A E P +VHCSAGIGR+G I
Sbjct: 199 SRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKE--EPVVVHCSAGIGRTGVLIT 256
Query: 237 VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
++ + LI + V +I+ MR R +IQTP Q RF +AI++
Sbjct: 257 METAMCLIECNQ--PVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVY 304
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 349 bits (897), Expect = e-120
Identities = 90/277 (32%), Positives = 151/277 (54%), Gaps = 18/277 (6%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CSNDYINANLV 81
++ ++ Y+ + +R EN++ NRY++++P+DH+R+ L +DYINAN++
Sbjct: 38 FETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANII 97
Query: 82 EIE--------QANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
E + + YI TQG L NT+ FW MV+++N + IVM K +E+ + KC +Y
Sbjct: 98 MPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKY 157
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFG 192
WP + E+ + V E + R ++++ R V +H+ TWPD G
Sbjct: 158 WPDEYAL-KEY--GVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHG 214
Query: 193 VPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-N 251
VP P +L F+ V + GP +VHCSAGIGR+GTFI++D ++ +I + ++ +
Sbjct: 215 VPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCD 274
Query: 252 VSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
+ V + + +R R G++QT Q RF Y A+ I T
Sbjct: 275 IDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIET 311
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 349 bits (897), Expect = e-120
Identities = 91/288 (31%), Positives = 136/288 (47%), Gaps = 25/288 (8%)
Query: 1 MSETREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIP 60
+ ++ E E++ + ENR NRY++++P
Sbjct: 42 LRGLLDQGIPSKELENLQELKP---------------LDQCLIGQTKENRRKNRYKNILP 86
Query: 61 YDHSRIALKRCSNDYINANLVEIEQANRK--YILTQGPLPNTIAHFWVMVWEQNCKAIVM 118
YD +R+ L YINA+ ++I + YI QGPLP T+ FW M+WEQ I M
Sbjct: 87 YDATRVPLGDEG-GYINASFIKIPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKSTVIAM 145
Query: 119 LNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKER 178
+ + +E ++KC +YWP L + L F+ R + + D ++ + R
Sbjct: 146 MTQEVEGEKIKCQRYWPNILGKTTMV-SNRLRLALVRMQQLKGFVVRAMTLEDIQTREVR 204
Query: 179 HVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD 238
H+ ++T WPD P P LL FI +R GP I HCSAGIGRSGT I +D
Sbjct: 205 HISHLNFTAWPDHDTPSQPDDLLTFISYMRHI----HRSGPIITHCSAGIGRSGTLICID 260
Query: 239 CVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
VL LIS + + +++ MR R G++QT DQ F YQ I+ +
Sbjct: 261 VVLGLISQDL--DFDISDLVRCMRLQRHGMVQTEDQYIFCYQVILYVL 306
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 346 bits (891), Expect = e-120
Identities = 91/288 (31%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 11 ELEFEDIDSKNLWAVVYQRIRTVSNAY----DYTLDDAKRSENRHLNRYRDVIPYDHSRI 66
LE + A + I+ S A+ + R EN NRY+DV+PYD +R+
Sbjct: 18 RLEARGGREGAVLAGEFSDIQACSAAWKADGVCSTVAGSRPENVRKNRYKDVLPYDQTRV 77
Query: 67 ALKRCSN----DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKI 122
L DYIN N + + YI TQGPLP+T+ FW +VWE K I+M +
Sbjct: 78 ILSLLQEEGHSDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKVILMACRE 137
Query: 123 IEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVN-HSYFITRNIRVTDKESSKERHVI 181
IE + +C +YW L+ + L E + + R ++VT + R V
Sbjct: 138 IENGRKRCERYWAQEQEP-LQT--GLFCITLIKEKWLNEDIMLRTLKVT--FQKESRSVY 192
Query: 182 LFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVL 241
Y +WPD GVP SP +L + R+ P VHCSAG GR+G VD V
Sbjct: 193 QLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGP--EPLCVHCSAGCGRTGVLCTVDYVR 250
Query: 242 KLISDGEI-NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
+L+ I + S+ +++L+MR R +QT +Q RF Y + + +
Sbjct: 251 QLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTVAQMFCS 298
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 346 bits (890), Expect = e-119
Identities = 97/290 (33%), Positives = 143/290 (49%), Gaps = 27/290 (9%)
Query: 5 REKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHS 64
R + + E++ + + A T A+ N NR+ D +PYDH+
Sbjct: 26 RNRDRLAKEWQALCA--------------YQAEPNTCATAQGEGNIKKNRHPDFLPYDHA 71
Query: 65 RIALKRCSN----DYINANLVE-IEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVML 119
RI LK S+ DYINA+ + + YI TQGPL +TIA FW MVWE C IVML
Sbjct: 72 RIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVML 131
Query: 120 NKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHS-YFITRNIRVTDKESSKER 178
++E +C +YWP +S V+L SE F+ R+ + + ++ + R
Sbjct: 132 TPLVEDGVKQCDRYWPDEGASLYH----VYEVNLVSEHIWCEDFLVRSFYLKNVQTQETR 187
Query: 179 HVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVD 238
+ FH+ +WP G P S LL F R V K P IVHCS G GR+GT+IL+D
Sbjct: 188 TLTQFHFLSWPAEGTPASTRPLLDFRRKVNKC--YRGRSCPIIVHCSDGAGRTGTYILID 245
Query: 239 CVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
VL ++ G + + L +R R GL+++ DQ F+ A+ E ++
Sbjct: 246 MVLNRMAKGV-KEIDIAATLEHVRDQRPGLVRSKDQFEFALTAVAEEVNA 294
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 346 bits (891), Expect = e-119
Identities = 100/286 (34%), Positives = 158/286 (55%), Gaps = 25/286 (8%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR------C 71
++++ ++ ++ ++ + + T + + EN+H NRY +++ YDHSR+ L+
Sbjct: 36 NNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSK 95
Query: 72 SNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCS 131
+DYINAN V+ + YI TQGPL +T FW M+WEQN IVM+ ++EK + KC
Sbjct: 96 HSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCD 155
Query: 132 QYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKE-----------SSKERHV 180
QYWPT +S + N+ V L S H+ + R + + + ER V
Sbjct: 156 QYWPTENSEEYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVV 211
Query: 181 ILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCV 240
I +HYT WPD GVP+ +L F+R + GP +VHCSAG+GR+GT+I++D +
Sbjct: 212 IQYHYTQWPDMGVPEYALPVLTFVRRSSAA--RMPETGPVLVHCSAGVGRTGTYIVIDSM 269
Query: 241 LKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
L+ I D + V+V L +R R L+QT +Q F + A++E I
Sbjct: 270 LQQIKDK--STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI 313
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 346 bits (889), Expect = e-119
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 34/303 (11%)
Query: 1 MSETREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIP 60
+S + + ++ EF + + ++ +NRH NRY D++
Sbjct: 12 LSTRAQYSRMQREFVQLQRQEN---------------PRNINFTTSLKNRHKNRYLDILA 56
Query: 61 YDHSRIAL-------KRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNC 113
+ + + YIN NL++++ ++ Q P+P + F + E+
Sbjct: 57 NEETIYPPVLKAVGAQPGRYPYINGNLIDLDL-PHTFVACQAPVPQGVPDFLETLSEKKV 115
Query: 114 KAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDV-NLSVHLDSEVNHSY------FITRN 166
+VML K+ E LK +YWP L FP+ + ++ + + SY I R
Sbjct: 116 DLVVMLTKLREGGVLKAERYWPEEEEDSLSFPESGHDAIKVTRDAEASYEVDAELDIVRR 175
Query: 167 IRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSA 226
V V+ Y WPD GVP+S + + ++ P +VHCSA
Sbjct: 176 PLVIHVPGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKNC----VTTSPILVHCSA 231
Query: 227 GIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
GIGR+GT I L I G + + +V I+ M+ R G++Q +Q Y ++ +
Sbjct: 232 GIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKRFGMVQRLEQYAVIYMTVLGRL 291
Query: 287 HTD 289
D
Sbjct: 292 GVD 294
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 344 bits (885), Expect = e-119
Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 15/286 (5%)
Query: 10 IELEFEDIDSKNLWAVVYQRIRTVSNAY----DYTLDDAKRSENRHLNRYRDVIPYDHSR 65
++ +K +A + +++ S Y Y A++ +N NRY+D++PYD+SR
Sbjct: 11 LDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSR 70
Query: 66 IALKRCSN----DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNK 121
+ L ++ YINAN ++ + YI TQGPL T+ FW M+WE + IVM
Sbjct: 71 VELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACM 130
Query: 122 IIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVI 181
E + KC +YW LEF SV ++E S +I R ++V +S+ R +
Sbjct: 131 EYEMGKKKCERYWAEPGEMQLEFGP--FSVSCEAEKRKSDYIIRTLKVK--FNSETRTIY 186
Query: 182 LFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVL 241
FHY WPD VP S +L I VR +++ P +HCSAG GR+G +D
Sbjct: 187 QFHYKNWPDHDVPSSIDPILELIWDVRCY--QEDDSVPICIHCSAGCGRTGVICAIDYTW 244
Query: 242 KLISDGEI-NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
L+ DG I N SV ++ EMR R L+QT +Q Y A++E
Sbjct: 245 MLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLELF 290
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 344 bits (884), Expect = e-118
Identities = 89/277 (32%), Positives = 140/277 (50%), Gaps = 18/277 (6%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN---- 73
D L+ + + T + A + EN+ NRY +++PYDHSR+ L
Sbjct: 26 DDNKLFREEFNALPACPI--QATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDS 83
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
DYINA+ + Q K+I QGP T+ FW M+WEQN IVM+ + E+ + KC+QY
Sbjct: 84 DYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQY 143
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTD----KESSKERHVILFHYTTWP 189
WP N+ V ++ + R + +R + FH+T+WP
Sbjct: 144 WPDQGCWTYG----NVRVSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWP 199
Query: 190 DFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEI 249
DFGVP +P +L+F++ V+ + G +VHCSAG+GR+GTF+++D +L ++
Sbjct: 200 DFGVPFTPIGMLKFLKKVKACN--PQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSE-- 255
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
V V + +R R ++QT Q F YQA++E
Sbjct: 256 RKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHY 292
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 343 bits (882), Expect = e-118
Identities = 95/273 (34%), Positives = 144/273 (52%), Gaps = 16/273 (5%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN---- 73
+ Y+ + + D AK ENR+ NRY ++I YDHSR+ L
Sbjct: 19 GQGYGFKEEYEALP---EGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHS 75
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
DYINAN ++ R YI TQGP+ T+ FW M+W++N +IVM+ ++E ++KC +Y
Sbjct: 76 DYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRVKCVRY 135
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGV 193
WP + + D + V L + ++ R V K + R + LFH+T+WPD GV
Sbjct: 136 WPDDTE---VYGD--IKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGV 190
Query: 194 PQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVS 253
P T LL F+R V+ GP +VHCSAG GR+G FI +D +L + + + V
Sbjct: 191 PCYATGLLGFVRQVKFLN--PPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGV--VD 246
Query: 254 VQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ + E+R R+ L+QT +Q F + AI+E
Sbjct: 247 IFNCVRELRAQRVNLVQTEEQYVFVHDAILEAC 279
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 343 bits (881), Expect = e-118
Identities = 98/273 (35%), Positives = 154/273 (56%), Gaps = 15/273 (5%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN---- 73
DS ++ ++ ++ V D A NR NR+ +++PYDHSR L+ +
Sbjct: 41 DSDFRFSEEFEELKHVG--RDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGS 98
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
DYINAN V + R++I+TQGPL +T FW M WE N +AIVML + EK + KC QY
Sbjct: 99 DYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQY 158
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGV 193
WP + + + D + V + ++ +++ ++ + S++R + FH+TTWPDFGV
Sbjct: 159 WPNDTVP-VFYGD--IKVQILNDSHYADWVMTEFMLC--RGSEQRILRHFHFTTWPDFGV 213
Query: 194 PQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVS 253
P P L+RF+RA R + P +VHCSAG+GRSGTFI +D +L+ I+ + V
Sbjct: 214 PNPPQTLVRFVRAFRDR--IGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSD--YVD 269
Query: 254 VQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
+ I+ MR R+ ++QT Q +Q ++ +
Sbjct: 270 IFGIVYAMRKERVWMVQTEQQYICIHQCLLAVL 302
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 343 bits (882), Expect = e-118
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 20/294 (6%)
Query: 9 SIELEFEDIDSKNLWAVV---YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSR 65
++ F + K +V Y++I + A EN +R R+V+PY+ +R
Sbjct: 30 PMDERFRTLKKKLEEGMVFTEYEQIPKKKA--NGIFSTAALPENAERSRIREVVPYEENR 87
Query: 66 IALKRCSN---DYINANLV--EIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLN 120
+ L YINA+ + + A YI TQGPLP+T FW MVWEQ I M+
Sbjct: 88 VELIPTKENNTGYINASHIKVVVGGAEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVT 147
Query: 121 KIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHV 180
E + K +YWP S V + + T ++V S +ER V
Sbjct: 148 AEEEGGRTKSHRYWPKLGSKHSSATYGKFKVTTKFRTDSVCYATTGLKVKHLLSGQERTV 207
Query: 181 ILFHYTTWPDFGVPQSPTALLRFIRAVRK--------SGALDENMGPPIVHCSAGIGRSG 232
YT WPD G P+ L ++ ++ P +VHCSAG+GR+G
Sbjct: 208 WHLQYTDWPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTG 267
Query: 233 TFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 286
IL + ++ + E V V +L +R RM +IQT Q +F YQ +I+ +
Sbjct: 268 VLILSELMIYCLEHNE--KVEVPMMLRLLREQRMFMIQTIAQYKFVYQVLIQFL 319
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 337 bits (866), Expect = e-116
Identities = 80/252 (31%), Positives = 128/252 (50%), Gaps = 11/252 (4%)
Query: 41 LDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRKYILTQGP 96
+ N NR +IPY+ +R+ + DY+NA+ ++ + YI +QGP
Sbjct: 1 MRTGNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGP 60
Query: 97 LPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSE 156
L +TI FW M+WE +IVML ++ E+ Q KC+QYWP+ +++V L E
Sbjct: 61 LLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSDGLVSYG----DITVELKKE 116
Query: 157 VNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDEN 216
+ R++ VT+ +K R + FH+ WP+ G+P ++ I AV+K N
Sbjct: 117 EECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQQSGN 176
Query: 217 MGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLR 276
P VHCSAG GR+GTF + VL+ + I + V + + +R R ++QT +Q
Sbjct: 177 -HPITVHCSAGAGRTGTFCALSTVLERVKAEGI--LDVFQTVKSLRLQRPHMVQTLEQYE 233
Query: 277 FSYQAIIEGIHT 288
F Y+ + E I
Sbjct: 234 FCYKVVQEYIDA 245
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 338 bits (870), Expect = e-116
Identities = 97/273 (35%), Positives = 153/273 (56%), Gaps = 17/273 (6%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN---- 73
DS +++ ++ ++ + D A NR NRY +++PYD SR+ L +
Sbjct: 20 DSDYKFSLQFEELKLIGL--DIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEGA 77
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
DYINAN + + ++YI TQGPLP T FW MV +Q + IVML + EK ++KC Y
Sbjct: 78 DYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDHY 137
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGV 193
WP + + + D ++V + SE + R+ R+ + + + V+ F+YT WPD GV
Sbjct: 138 WPFTEEP-IAYGD--ITVEMISEEEQDDWACRHFRIN--YADEMQDVMHFNYTAWPDHGV 192
Query: 194 PQ--SPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINN 251
P + ++L+F+ VR+ GP I+HCSAG+GR+GTFI +D +L+ I D E
Sbjct: 193 PTANAAESILQFVHMVRQQATKS--KGPMIIHCSAGVGRTGTFIALDRLLQHIRDHE--F 248
Query: 252 VSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
V + ++ EMR YRM ++QT +Q F +Q +
Sbjct: 249 VDILGLVSEMRSYRMSMVQTEEQYIFIHQCVQL 281
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 345 bits (886), Expect = e-115
Identities = 95/287 (33%), Positives = 148/287 (51%), Gaps = 15/287 (5%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN---- 73
+ ++ Y+ I +T +++ N+ NRY +VI YDHSR+ L
Sbjct: 15 NDGLKFSQEYESIDPGQ---QFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGS 71
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
DYINAN ++ + YI TQGPLP T+ FW MVWEQ +VM+ ++ EK+++KC QY
Sbjct: 72 DYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQY 131
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGV 193
WP + + V L V + + R + SS++R + F + WPD GV
Sbjct: 132 WPARGTETCG----LIQVTLLDTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGV 187
Query: 194 PQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVS 253
P+ PT +L F+R V+ LD GP +VHCSAG+GR+G FI++D +L+ + V
Sbjct: 188 PEYPTPILAFLRRVKACNPLD--AGPMVVHCSAGVGRTGCFIVIDAMLERMKHE--KTVD 243
Query: 254 VQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDDEFFVFH 300
+ + MR R ++QT DQ F ++A++E ++
Sbjct: 244 IYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYA 290
Score = 324 bits (832), Expect = e-107
Identities = 85/258 (32%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
Query: 35 NAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN----DYINANLVEIEQANRKY 90
A+ A N+ NR +++PY+ +R+ L+ DYINA+ ++ + + Y
Sbjct: 318 KAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAY 377
Query: 91 ILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLS 150
I TQGPL + FW M+WE N IVML K+ E + KC QYWP S+ +
Sbjct: 378 IATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQ----YFV 433
Query: 151 VHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKS 210
V +E N +I R +VTD + R + F +T WP+ GVP++ + FI V K+
Sbjct: 434 VDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKT 493
Query: 211 GALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQ 270
GP VHCSAG+GR+G FI + VL+ + + V + + + +R R ++Q
Sbjct: 494 KEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGV--VDMFQTVKTLRTQRPAMVQ 551
Query: 271 TPDQLRFSYQAIIEGIHT 288
T DQ + Y+A +E + +
Sbjct: 552 TEDQYQLCYRAALEYLGS 569
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 344 bits (884), Expect = e-115
Identities = 96/353 (27%), Positives = 174/353 (49%), Gaps = 23/353 (6%)
Query: 23 WAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CSNDYIN 77
+ ++ ++ + + +R EN+ NRY++++P+DHSR+ L+ +DYIN
Sbjct: 244 FWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYIN 303
Query: 78 ANLV-----EIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQ 132
AN + ++ + YI +QG L T+ FW M W++N + IVM + +EK + KC
Sbjct: 304 ANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVP 363
Query: 133 YWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDF 191
YWP + SV E + + + R ++V+ ++ R + + Y +WPD
Sbjct: 364 YWPEVGMQ-RAYGP--YSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDH 420
Query: 192 GVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN- 250
GVP P +L F+ + + + GP IVH SAGIGR+GT I++D +++ IS ++
Sbjct: 421 GVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDC 480
Query: 251 NVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT--------DWETDDEFFVFHSD 302
++ +Q+ + +R R G++QT Q +F Y AI + I T + E +
Sbjct: 481 DIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKKKLEVLQSQKGQESEYGNIT 540
Query: 303 SSLINGNGSTAGVTNNNPRKRKTEEKAERIAEKVKQIKKKQSEAEDKKKKSLE 355
N ++ K E ++ +++KK++S ++K K SL+
Sbjct: 541 YPPAMKNAHAKASRTSSKHKEDVYENLHTKNKREEKVKKQRSADKEKSKGSLK 593
Score = 100 bits (249), Expect = 3e-23
Identities = 20/156 (12%), Positives = 36/156 (23%), Gaps = 11/156 (7%)
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
Y +HL +N S + + ++ W
Sbjct: 76 VEYYTQQQGVL---QDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPW- 131
Query: 190 DFGVPQSPTALLRFIRAVRK-----SGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLI 244
F V +S + F+ +V + V C G G D + L+
Sbjct: 132 TFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLV 191
Query: 245 SDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ 280
++E + R T
Sbjct: 192 E--HFKKTGIEEASGAFVYLRQPYYATRVNAADIEN 225
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 342 bits (878), Expect = e-114
Identities = 86/278 (30%), Positives = 150/278 (53%), Gaps = 15/278 (5%)
Query: 23 WAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN-----DYIN 77
+ ++ ++ + + +R EN+ NRY++++P+DHSR+ L+ + DYIN
Sbjct: 244 FWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYIN 303
Query: 78 ANLV-----EIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQ 132
AN + ++ + YI +QG L T+ FW M W++N + IVM + +EK + KC
Sbjct: 304 ANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVP 363
Query: 133 YWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDF 191
YWP + SV E + + + R ++V+ ++ R + + Y +WPD
Sbjct: 364 YWPEVGMQ-RAYGP--YSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDH 420
Query: 192 GVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN- 250
GVP P +L F+ + + + GP IVHCSAGIGR+GT I++D +++ IS ++
Sbjct: 421 GVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDC 480
Query: 251 NVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
++ +Q+ + +R R G++QT Q +F Y AI + I T
Sbjct: 481 DIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIET 518
Score = 102 bits (256), Expect = 2e-24
Identities = 23/178 (12%), Positives = 43/178 (24%), Gaps = 11/178 (6%)
Query: 130 CSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWP 189
Y + +HL +N S + + ++ W
Sbjct: 76 VEYYTQ---QQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPW- 131
Query: 190 DFGVPQSPTALLRFIRAVRK-----SGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLI 244
F V +S + F+ +V + V C G G D + L+
Sbjct: 132 TFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLV 191
Query: 245 SDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDDEFFVFHSD 302
++E + R T ++E D F +
Sbjct: 192 EH--FKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAGFWEE 247
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 341 bits (876), Expect = e-114
Identities = 89/277 (32%), Positives = 150/277 (54%), Gaps = 18/277 (6%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CSNDYINANLV 81
++ ++ Y+ + +R EN++ NRY++++P+DH+R+ L +DYINAN++
Sbjct: 251 FETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANII 310
Query: 82 EIE--------QANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
E + + YI TQG L NT+ FW MV+++N + IVM K +E+ + KC +Y
Sbjct: 311 MPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKY 370
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKE-RHVILFHYTTWPDFG 192
WP + E+ + V E + R ++++ R V +H+ TWPD G
Sbjct: 371 WPDEYAL-KEYGV--MRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHG 427
Query: 193 VPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN-N 251
VP P +L F+ V + GP +VHCSAGIGR+GTFI++D ++ +I + ++ +
Sbjct: 428 VPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCD 487
Query: 252 VSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
+ V + + +R R G++QT Q R Y A+ I T
Sbjct: 488 IDVPKTIQMVRSQRSGMVQTEAQYRSIYMAVQHYIET 524
Score = 43.3 bits (102), Expect = 9e-05
Identities = 8/96 (8%), Positives = 26/96 (27%), Gaps = 25/96 (26%)
Query: 196 SPTALLRFIRAV---RKSGALDENMGPPIVHCSAG---IGRSGTFILVDCVLKLISDGEI 249
P + +R +S + ++ C +G F + +++
Sbjct: 143 HPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVE------- 195
Query: 250 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEG 285
+ + +++T + Q +
Sbjct: 196 ------------HYKKNPMVETLGTVLQLKQPLNTT 219
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 344 bits (884), Expect = e-114
Identities = 101/305 (33%), Positives = 162/305 (53%), Gaps = 25/305 (8%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR------C 71
++++ ++ ++ ++ + + T + + EN+H NRY +++ YDHSR+ L+
Sbjct: 18 NNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSK 77
Query: 72 SNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCS 131
+DYINAN V+ + YI TQGPL +T FW M+WEQN IVM+ ++EK + KC
Sbjct: 78 HSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCD 137
Query: 132 QYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKE-----------SSKERHV 180
QYWPT +S + N+ V L S H+ + R + + + ER V
Sbjct: 138 QYWPTENSEEYG----NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVV 193
Query: 181 ILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCV 240
I +HYT WPD GVP+ +L F+R + GP +VHCSAG+GR+GT+I++D +
Sbjct: 194 IQYHYTQWPDMGVPEYALPVLTFVRRSSAA--RMPETGPVLVHCSAGVGRTGTYIVIDSM 251
Query: 241 LKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDDEFFVFH 300
L+ I D + V+V L +R R L+QT +Q F + A++E I +
Sbjct: 252 LQQIKDK--STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHS 309
Query: 301 SDSSL 305
+S+
Sbjct: 310 YVNSI 314
Score = 306 bits (786), Expect = 1e-99
Identities = 61/285 (21%), Positives = 113/285 (39%), Gaps = 16/285 (5%)
Query: 11 ELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR 70
+ + K ++ + + Y A++ N+ NR V+P + +R+ L
Sbjct: 313 SILIPGVGGKTRLEKQFKLVTQCNAKYVEC-FSAQKECNKEKNRNSSVVPSERARVGLAP 371
Query: 71 CSN----DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKN 126
DYINA+ + + ++I+TQ PLP+T FW M+W+ N + IVML
Sbjct: 372 LPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLA 431
Query: 127 QLKCSQYWPTSSSSDLEFPDVN---LSVHLDSEVNHSYFITRNIRVTDKESSKERHVILF 183
+ + YWP+ S + +S N I + + + V F
Sbjct: 432 EDEF-VYWPSREES-MNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHF 489
Query: 184 HYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKL 243
WP+ P S I +++ + GP IVH G +G + + +
Sbjct: 490 QCPKWPNPDAPISS--TFELINVIKEEALTRD--GPTIVHDEYGAVSAGMLCALTTLSQQ 545
Query: 244 ISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
+ + V V ++ + R G+ +Q +F Y+A++ + T
Sbjct: 546 LENENA--VDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVST 588
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 335 bits (861), Expect = e-111
Identities = 92/290 (31%), Positives = 143/290 (49%), Gaps = 17/290 (5%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN---- 73
D + + + + T + A + ENR NRY +++P DHSR+ L +
Sbjct: 25 DDCKQFREEFNSLPSGHI--QGTFELANKEENREKNRYPNILPNDHSRVILSQLDGIPCS 82
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
DYINA+ ++ + K+I QGP T+ FW MVWEQ IVML + E+ + KC QY
Sbjct: 83 DYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCHQY 142
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTD---KESSKERHVILFHYTTWPD 190
WP N+ V ++ V + R + R V H+T+WPD
Sbjct: 143 WPDQGCWTYG----NIRVCVEDCVVLVDYTIRKFCIQPQLPDGCKAPRLVSQLHFTSWPD 198
Query: 191 FGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEIN 250
FGVP +P +L+F++ V+ + GP +VHCSAG+GR+GTFI++D ++ ++
Sbjct: 199 FGVPFTPIGMLKFLKKVKTLN--PVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAE--Q 254
Query: 251 NVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDDEFFVFH 300
V V E + +R+ R ++QT Q F YQA++E D +
Sbjct: 255 KVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEK 304
Score = 317 bits (814), Expect = e-104
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 30/297 (10%)
Query: 1 MSETREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIP 60
+ +K +E EF + + + + N R +IP
Sbjct: 312 TTTHFDKIGLEEEFRKLTNVRIM--------------KENMRTGNLPANMKKARVIQIIP 357
Query: 61 YDHSRIALKRC----SNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAI 116
YD +R+ L DYINA+ ++ + +I TQGPL +T+ FW M+WE I
Sbjct: 358 YDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTI 417
Query: 117 VMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVT-----D 171
VML ++ E+ Q KC QYWPT S +++ + ++ R+ VT
Sbjct: 418 VMLTEVQEREQDKCYQYWPTEGSVTHG----EITIEIKNDTLSEAISIRDFLVTLNQPQA 473
Query: 172 KESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRS 231
++ + R V FH+ WP+ G+P ++ I AV+K N P VHCSAG GR+
Sbjct: 474 RQGEQVRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGN-HPITVHCSAGAGRT 532
Query: 232 GTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
GTFI + +L+ + + + V + + +R R ++QT +Q F Y+ + + I
Sbjct: 533 GTFIALSNILERVKAEGL--LDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDI 587
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 323 bits (831), Expect = e-111
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 21/289 (7%)
Query: 2 SETREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPY 61
S +R T +L + + S +L + I + + NRY+ ++P
Sbjct: 14 SASRVLTRSQLR-DVVASSHLLQSEFMEIPMNF----VDPKEIDIPRHGTKNRYKTILPN 68
Query: 62 DHSRIALKR-----CSNDYINANLVE-IEQANRKYILTQGPLPNTIAHFWVMVWEQNCKA 115
SR+ L+ + YINAN + + +I TQGP+ NT+ FW MVW+++
Sbjct: 69 PLSRVCLRPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFWQMVWQEDSPV 128
Query: 116 IVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESS 175
IVM+ K+ EKN+ KC YWP + + V + + RN+ + K+ S
Sbjct: 129 IVMITKLKEKNE-KCVLYWPEKRG---IYGK--VEVLVTGVTECDNYTIRNLVL--KQGS 180
Query: 176 KERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFI 235
+HV + YT+WPD P S LL+ + V + E GP +VHCSAGIGR+G FI
Sbjct: 181 HTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFI 240
Query: 236 LVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 284
+ + + + V I+ ++R R G++QT +Q F + A+
Sbjct: 241 ATSIGCQQLKEEGV--VDALSIVCQLRVDRGGMVQTSEQYEFVHHALCL 287
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 334 bits (858), Expect = e-110
Identities = 90/319 (28%), Positives = 158/319 (49%), Gaps = 13/319 (4%)
Query: 18 DSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR----CSN 73
D + +Q I V + + + +A++ N++ NRY D++PYD++R+ L +
Sbjct: 25 DEGRPFLAEFQSIPRVFS--KFPIKEARKPFNQNKNRYVDILPYDYNRVELSEINGDAGS 82
Query: 74 DYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQY 133
+YINA+ ++ + RKYI QGP T+ FW M+WEQ IVM+ + E N+ KC++Y
Sbjct: 83 NYINASYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEEGNRNKCAEY 142
Query: 134 WPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTD-KESSKERHVILFHYTTWPDFG 192
WP+ F DV V ++ +I + + + + KE + R V +T+WPD G
Sbjct: 143 WPSMEEGTRAFGDV--VVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHG 200
Query: 193 VPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNV 252
VP+ P LL+ R V + GP +VH SAG+GR+GT+I +D +L+ + N V
Sbjct: 201 VPEDPHLLLKLRRRVNAFS--NFFSGPIVVHSSAGVGRTGTYIGIDAMLEGLEAE--NKV 256
Query: 253 SVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDDEFFVFHSDSSLINGNGST 312
V ++++R R ++Q Q +QA++E + + ++ + +
Sbjct: 257 DVYGYVVKLRRQRCLMVQVEAQYILIHQALVEYNQFGETEVNLSELHPYLHNMKKRDPPS 316
Query: 313 AGVTNNNPRKRKTEEKAER 331
+R ++ R
Sbjct: 317 EPSPLEAEFQRLPSYRSWR 335
Score = 300 bits (770), Expect = 2e-97
Identities = 71/300 (23%), Positives = 120/300 (40%), Gaps = 40/300 (13%)
Query: 20 KNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRC-------- 71
+ +QR+ + T + EN+ NR +VIPYD++R+ LK
Sbjct: 318 PSPLEAEFQRLPSYR--SWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESE 375
Query: 72 ---------------SNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAI 116
+ YINA+ + I QGPL TI FW M++++ K I
Sbjct: 376 HDSDESSDDDSDSEEPSKYINASFIMSYWKPEVMIAAQGPLKETIGDFWQMIFQRKVKVI 435
Query: 117 VMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSK 176
VML ++ +Q C+QYW + D + V L S + R + +
Sbjct: 436 VMLTELKHGDQEICAQYWGEGK---QTYGD--IEVDLKDTDKSSTYTLRVFELRHSKRKD 490
Query: 177 ERHVILFHYTTWPDFGVPQSPTALLRFIRAVRK--------SGALDENMGPPIVHCSAGI 228
R V + YT W +P P L+ I+ V++ G P ++HC G
Sbjct: 491 SRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGS 550
Query: 229 GRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 288
++G F + +L+ V + +++ +R R+G++ T +Q +F Y I
Sbjct: 551 QQTGIFCALLNLLESAETE--EVVDIFQVVKALRKARLGMVSTFEQYQFLYDVIASTYPA 608
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 318 bits (816), Expect = e-108
Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKRCSN----DYINANLVE 82
+ +I + + +D + +RY+ ++P SR+ L R + DYINAN +
Sbjct: 50 FLKIPS----NFVSPEDLDIPGHASKDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIR 105
Query: 83 -IEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSD 141
+ + YI TQGP+PNT++ FW MVW++ IVML ++ E + KC YWPT
Sbjct: 106 GYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEE-- 162
Query: 142 LEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALL 201
+ + + + R + + +E + R V ++ WPD P+S LL
Sbjct: 163 -TYGPF--QIRIQDMKECPEYTVRQLTIQYQE--ERRSVKHILFSAWPDHQTPESAGPLL 217
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEM 261
R + V +S + GP +VHCSAGIGR+G FI + + V + I+ ++
Sbjct: 218 RLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARG--EVDILGIVCQL 275
Query: 262 RHYRMGLIQTPDQLRFSYQAIIEGIHT 288
R R G+IQT +Q +F + +
Sbjct: 276 RLDRGGMIQTAEQYQFLHHTLALYAGQ 302
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 310 bits (795), Expect = e-105
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 21/267 (7%)
Query: 27 YQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALKR-----CSNDYINANLV 81
+ I + NRY+ ++P HSR+ L + YINAN +
Sbjct: 46 FFEIPMNF----VDPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYI 101
Query: 82 E-IEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
+ YI TQGP+ +T+A FW MVW+++ IVM+ I E N+ KC++YWP
Sbjct: 102 RGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITNIEEMNE-KCTEYWPEEQ-- 158
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTAL 200
+ + V + + ++ + R I + K ++ER + + +T+WPD P L
Sbjct: 159 -VAYDGV--EITVQKVIHTEDYRLRLISL--KSGTEERGLKHYWFTSWPDQKTPDRAPPL 213
Query: 201 LRFIRAVRKSGALD-ENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILL 259
L +R V ++ + + P IVH SAGIGR+G FI + + + V + +
Sbjct: 214 LHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSICCQQLRQEGV--VDILKTTC 271
Query: 260 EMRHYRMGLIQTPDQLRFSYQAIIEGI 286
++R R G+IQT +Q +F + +
Sbjct: 272 QLRQDRGGMIQTCEQYQFVHHVMSLYE 298
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 282 bits (723), Expect = 2e-94
Identities = 53/300 (17%), Positives = 106/300 (35%), Gaps = 34/300 (11%)
Query: 3 ETREKTSIELEFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYD 62
E R + +++ + +R + LNR+RD+
Sbjct: 15 EARATAPSTVSPYGPEARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRR 74
Query: 63 HSRIALKRCSNDYINANLVEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKI 122
+ + +NAN +++ N + I Q PL + + + M+ E + +L
Sbjct: 75 QTAVRA------DLNANYIQVG--NTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASS 126
Query: 123 IEKNQLKCS--QYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITRNIRVTD--KESSKER 178
E + Y+ S + + + + +V I ++ + K
Sbjct: 127 SEIANQRFGMPDYFRQS----GTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTI 182
Query: 179 HVILFHYTTWPDFGVPQS--PTALLRFIRAVRK-----------SGALDENMGPPIVHCS 225
V + H WPD S AL + + S D++ P++H
Sbjct: 183 SVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSR 242
Query: 226 AGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMG-LIQTPDQLRFSYQAIIE 284
AG+GR+ I C+ D + +SV++++ +MR R G ++Q +QL +
Sbjct: 243 AGVGRTAQLIGAMCMN----DSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEG 298
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 254 bits (650), Expect = 3e-82
Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 23/250 (9%)
Query: 48 ENRHLNRYRDVIPYDHSRIALKRCSNDYINANLVEIEQANRKYILTQGP--LPNTIAHFW 105
+ +++ L +N + + P P+ +
Sbjct: 145 LGLARFAVSSIPINQQTQVKLSDGMPVPVNTLTFD---GKPVALAGSYPKNTPDALEAHM 201
Query: 106 VMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYFITR 165
M+ E+ C +V+L ++Q++ Q P S F +V+ +
Sbjct: 202 KMLLEKECSCLVVL---TSEDQMQAKQLPPYFRGSY-TFGEVHTNSQ-KVSSASQGEAID 256
Query: 166 NIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRK------SGALDENMGP 219
+ K + + H WPD S L V+ G +
Sbjct: 257 QYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHL 316
Query: 220 PIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGL-IQTPDQLRFS 278
P++HC G+GR+GT + + + +++++ + R R ++ Q
Sbjct: 317 PMIHCLGGVGRTGTMAAALVLK------DNPHSNLEQVRADFRDSRNNRMLEDASQFVQL 370
Query: 279 YQAIIEGIHT 288
+ + T
Sbjct: 371 KAMQAQLLMT 380
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 84.1 bits (208), Expect = 8e-20
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
S +++ + + PD GVP S + L ++ + +VHC G
Sbjct: 47 DKDYYLSILKKNGLQPLHIPIPDGGVP-SDSQFLTIMKWLLSEK------EGNLVHCVGG 99
Query: 228 IGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQ 280
IGR+GT + +L + V+ + E+R R G +QT +Q F +
Sbjct: 100 IGRTGTILASYLILTE-------GLEVESAIDEVRLVRPGAVQTYEQEMFLLR 145
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 63.6 bits (155), Expect = 2e-12
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 167 IRVTDKE--SSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPI-VH 223
+ +T++ S + H PDF P +P + RF++ V ++ G + VH
Sbjct: 41 VSLTERGPPHSDSCPGLTLHRLRIPDFCPP-APDQIDRFVQIVDEA----NARGEAVGVH 95
Query: 224 CSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
C+ G GR+GT + L+ + ++ + + E+R R G I+T +Q +
Sbjct: 96 CALGFGRTGTML----ACYLV---KERGLAAGDAIAEIRRLRPGSIETYEQEKA 142
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 57.4 bits (138), Expect = 6e-10
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 168 RVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAG 227
RV + ++ I+ H+ D G P + + + L ++H G
Sbjct: 88 RVPNLLDLYQQCGIITHHHPIADGGTP-DIASCCEIMEELTT--CLKNY-RKTLIHSYGG 143
Query: 228 IGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRM-GLIQTPDQLRF 277
+GRS C+L +SD +S ++ + +R R G IQT Q +
Sbjct: 144 LGRSCLVAA--CLLLYLSDT----ISPEQAIDSLRDLRGSGAIQTIKQYNY 188
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 53.1 bits (127), Expect = 9e-09
Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 58/197 (29%)
Query: 81 VEIEQANRKYILTQGPLPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
VE+ N ++++T P T+ F + + IV + +
Sbjct: 9 VEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATY---------------- 52
Query: 141 DLEFPDVNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTAL 200
+ + I V + D P +
Sbjct: 53 -----------------DTTLVEKEGIHV--------------LDWPFDDGAPP--SNQI 79
Query: 201 LRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLE 260
+ ++ K +E VHC AG+GR+ + + + + ++ +
Sbjct: 80 VDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE--------GGMKYEDAVQF 131
Query: 261 MRHYRMGLIQTPDQLRF 277
+R R G + QL +
Sbjct: 132 IRQKRRGAFNSK-QLLY 147
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 55.0 bits (132), Expect = 1e-08
Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 14/120 (11%)
Query: 158 NHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENM 217
++ I R + H + D P + + F+ +
Sbjct: 217 HNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTP-TDAIVKEFLDICENAE------ 269
Query: 218 GPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
G VH AG+GR+GT I C + + ++ E + +R R G + P Q
Sbjct: 270 GAIAVHSKAGLGRTGTLIA--CYIM-----KHYRMTAAETIAWVRICRPGSVIGPQQQFL 322
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 54.9 bits (131), Expect = 2e-08
Identities = 67/434 (15%), Positives = 123/434 (28%), Gaps = 134/434 (30%)
Query: 3 ETREKTSIELEFEDIDSKNL-WAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPY 61
++++ ++ E++ N + + I+T +R N + Y
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKF--LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129
Query: 62 DHSRI----ALKRCSNDYINANLVEIEQANRKYILTQG---------------------P 96
+ SR+ L++ L+E+ A K +L G
Sbjct: 130 NVSRLQPYLKLRQA--------LLELRPA--KNVLIDGVLGSGKTWVALDVCLSYKVQCK 179
Query: 97 LPNTIAHFWVMVWEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSSDLEFPDVNLSVH---- 152
+ I FW+ + N ++E Q Q P +S ++ L +H
Sbjct: 180 MDFKI--FWLNLKNCNSP-----ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 153 -----------------LDSEVNHS----YF--------ITRNIRVTDKESSKER-HVIL 182
L V ++ F TR +VTD S+ H+ L
Sbjct: 233 ELRRLLKSKPYENCLLVLL-NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 183 FHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENM--GPPIVHCSAG------IGRSGTF 234
H++ + + LL+++ + L + P + +
Sbjct: 292 DHHS--MTLTPDEVKSLLLKYLDC--RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 235 ILVDCVLKLISDGEINNVSVQEIL--LEMRHYRMGLIQTPDQLRFSYQ--AIIEGIHTDW 290
V+C KL I S+ +L E R L P ++I W
Sbjct: 348 KHVNCD-KLT---TIIESSL-NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI------W 396
Query: 291 ----ETDDEFFV--FHSDSSLINGNGSTAGVTNNNPR----------KRKTEEKAE---R 331
++D V H SL+ K K E +
Sbjct: 397 FDVIKSDVMVVVNKLHK-YSLVEKQ-------PKESTISIPSIYLELKVKLENEYALHRS 448
Query: 332 IAEKVKQIKKKQSE 345
I + K S+
Sbjct: 449 IVDHYNIPKTFDSD 462
Score = 31.0 bits (69), Expect = 0.76
Identities = 27/200 (13%), Positives = 56/200 (28%), Gaps = 62/200 (31%)
Query: 152 HLDSEVN---HSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVR 208
H+D E + Y D IL + F + +++
Sbjct: 6 HMDFETGEHQYQY--------KD---------ILSVFE--DAFVDNFDCKDVQDMPKSIL 46
Query: 209 KSGALDE--NMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRM 266
+D + SGT L L+S E + + +E
Sbjct: 47 SKEEIDHIIMSKDAV---------SGTLRLFWT---LLSKQE----EMVQKFVE------ 84
Query: 267 GLIQTPDQLRFSYQAIIEGIHT---DWETDDEFFVFHSDSSLINGNGSTAGVTNNNPRKR 323
+ LR +Y+ ++ I T ++ D L N N A
Sbjct: 85 ------EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-RLYNDNQVFA------KYNV 131
Query: 324 KTEEKAERIAEKVKQIKKKQ 343
+ ++ + + +++ +
Sbjct: 132 SRLQPYLKLRQALLELRPAK 151
Score = 29.8 bits (66), Expect = 1.5
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Query: 9 SIELEFEDIDSK--NLWAVVYQRIRTVSNAYDYTLDDAKRSENR---H---LNRYRDVIP 60
I+ + + +K V Q + + L+ + EN H ++ Y
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT 458
Query: 61 YDHSRIALKRCSN---DYINANLVEIEQANR 88
+D + +I +L IE R
Sbjct: 459 FDSDDLIPPYLDQYFYSHIGHHLKNIEHPER 489
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 50.4 bits (120), Expect = 9e-08
Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 17/119 (14%)
Query: 167 IRVTDKESSKER---HVILFHYTTWPDFGVPQSPTALLRFIRAV-----RKSGALDENMG 218
+RV I H + D P + L +++ + R+
Sbjct: 52 VRVCGPTYDATLVKSRGIDVHSWPFDDGAPP-TRAVLDSWLKLLDTELARQQEDPSVPPP 110
Query: 219 PPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
VHC AG+GR+ + L E NVS + + +R R G I Q+ +
Sbjct: 111 TIGVHCVAGLGRAPILVA--LALV-----EYGNVSALDAIALIREKRKGAINQT-QMHW 161
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 48.9 bits (116), Expect = 4e-07
Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 11/101 (10%)
Query: 177 ERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
E+ I + D P ++ ++ K +E VHC AG+GR+ +
Sbjct: 79 EKEGIHVLDWPFDDGAPP--SNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVA 136
Query: 237 VDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLRF 277
+ + + ++ + +R R G + QL +
Sbjct: 137 LALIE--------GGMKYEDAVQFIRQKRRGAFNSK-QLLY 168
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 49.8 bits (118), Expect = 8e-07
Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 12/119 (10%)
Query: 148 NLSVHLDSEVNHSYFITRNIRVTDKESSKE---RHVILFHYTTWPDFGVPQSPT--ALLR 202
S++ + + + + +E +H + T D P P L
Sbjct: 165 VKSIYRFDDKKNVILSPVYVNYNKVRTEEEMVKQHGANYFRLTLQDHFRPDDPDVDKFLE 224
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEM 261
F +++ K L HC AG+GR+ F+++ +LK D +++ ++ L+ +
Sbjct: 225 FYKSLPKDAWL-------HYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKLIGI 276
Score = 44.4 bits (104), Expect = 4e-05
Identities = 16/117 (13%), Positives = 45/117 (38%), Gaps = 18/117 (15%)
Query: 151 VHLDSEVNHSYFITRNIRVTDKESSKE---RHVILFHYTTWPDFGVPQSPT--ALLRFIR 205
+ + + + + +++ + ++ ++ + ++ D P + + F R
Sbjct: 466 IVAELDKDKMPIDPKPVKIESVMTEQQLVEKNGLHYYRIAATDHIWPSAANIDEFINFTR 525
Query: 206 AVRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMR 262
+ + L HC AG GR+ ++ + ++K +VS+ +IL
Sbjct: 526 TMPANAWL-------HFHCQAGAGRTTAYMAMYDMMK------NPDVSLGDILSRQY 569
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 47.4 bits (112), Expect = 2e-06
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 10/101 (9%)
Query: 177 ERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPI-VHCSAGIGRSGTFI 235
E+ I + G + FIR + + N I VHC+ G R+G I
Sbjct: 102 EKEGIKYIKLQCKGHGECPTTENTETFIRLCER--FNERNPPELIGVHCTHGFNRTGFLI 159
Query: 236 LVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLR 276
V K+ + S++ + R I D L+
Sbjct: 160 CAFLVEKM-------DWSIEAAVATFAQARPPGIYKGDYLK 193
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 46.1 bits (109), Expect = 3e-06
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 177 ERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENMGPPI-VHCSAGIGRSGTFI 235
R +L+ P +P + + FI V++ ++ G + VHC+ GI R+G +
Sbjct: 75 LRAGLLYKKIQVPGQTLP-PESIVQEFIDTVKEF--TEKCPGMLVGVHCTHGINRTGYMV 131
Query: 236 LVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQLR 276
L+ ++ QE + R I+ + ++
Sbjct: 132 ----CRYLM---HTLGIAPQEAIDRFEKARGHKIERQNYVQ 165
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.4 bits (112), Expect = 5e-06
Identities = 57/264 (21%), Positives = 91/264 (34%), Gaps = 86/264 (32%)
Query: 109 WE---QNC-KAIVMLNKIIEKNQLKCSQYWPTSSSSDL---EFPDVN-------LSV-HL 153
WE + KAI +L I ++C + +P +S + + N LS+ +L
Sbjct: 289 WESFFVSVRKAITVLFFI----GVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNL 344
Query: 154 DSEVNHSYFITRNIRVTDKESSKERHV-I-LFHYTTWPD-F---GVPQSPTALLRFIRAV 207
E + + T+ + V I L + G PQS L +
Sbjct: 345 TQE-----QVQDYVNKTNSHLPAGKQVEISLVNG---AKNLVVSGPPQS---LYGLNLTL 393
Query: 208 RKSGA---LDENMGP-------------PI---VHCSAGIGRSGTFILVDCVLKLISDGE 248
RK+ A LD++ P P+ H +LV + D
Sbjct: 394 RKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSH---------LLVPASDLINKDLV 444
Query: 249 INNVSVQEILLEMRHYRMGLIQTPDQ--LRFSYQAIIEGI-------HTDWETDDEFFVF 299
NNVS +++ Y T D LR +I E I WET +F
Sbjct: 445 KNNVSFNAKDIQIPVY-----DTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKAT 499
Query: 300 HSDSSLIN-GNGSTAGV---TNNN 319
H +++ G G +G+ T+ N
Sbjct: 500 H----ILDFGPGGASGLGVLTHRN 519
Score = 37.3 bits (86), Expect = 0.009
Identities = 55/307 (17%), Positives = 93/307 (30%), Gaps = 117/307 (38%)
Query: 88 RKYILTQG------PLPNTIAHFWVMV-WEQNCKAIVMLNKIIEKNQLKCSQYWPTSSSS 140
R L+ G +P T + F EQ NKI+ + + ++ +
Sbjct: 7 RPLTLSHGSLEHVLLVP-TASFFIASQLQEQ-------FNKILPEPTEGFAADDEPTTPA 58
Query: 141 DL------------------EFPDVNLSVHLDSEVNHSYFITRNI--------RVTDKES 174
+L +F V L++ L E + Y +I + D
Sbjct: 59 ELVGKFLGYVSSLVEPSKVGQFDQV-LNLCLT-EFENCYLEGNDIHALAAKLLQENDTTL 116
Query: 175 SKERHVILFHYTTWPDFGVP---QSPTALLRFIRAVRKSGA---------------LDE- 215
K + +I + T P +S +AL R AV + A +E
Sbjct: 117 VKTKELIKNYITARIMAKRPFDKKSNSALFR---AVGEGNAQLVAIFGGQGNTDDYFEEL 173
Query: 216 ----NMGPPIVHCSAGIGRSGTFI--LVDCVL---KLISDG-EINN-------------- 251
+V I S + L+ L K+ + G I
Sbjct: 174 RDLYQTYHVLV--GDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYL 231
Query: 252 ----VSVQEI-LLEMRHY-----RMGLIQTPDQLRFSYQAII---EGIHT--------DW 290
+S I ++++ HY +G TP +LR + +G+ T W
Sbjct: 232 LSIPISCPLIGVIQLAHYVVTAKLLGF--TPGELRSYLKGATGHSQGLVTAVAIAETDSW 289
Query: 291 ETDDEFF 297
E FF
Sbjct: 290 E---SFF 293
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 43.2 bits (101), Expect = 6e-05
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 14/129 (10%)
Query: 151 VHLDSEVNHSYFITRNIR-VTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRK 209
L R ++ V ++ E + + D P +P + RF+ R
Sbjct: 151 APLGKHKLPEGGEVRRVQKVQTEQEVAEAAGMRYFRIAATDHVWP-TPENIDRFLAFYR- 208
Query: 210 SGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLI 269
L ++ H AG+GR+ F+++ +LK +VS+++IL R + +G
Sbjct: 209 --TLPQD-AWLHFHSEAGVGRTTAFMVMTDMLKN------PSVSLKDIL--YRQHEIGGF 257
Query: 270 QTPDQLRFS 278
+ +
Sbjct: 258 YYGEFPIKT 266
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 41.8 bits (97), Expect = 2e-04
Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 9/117 (7%)
Query: 158 NHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDENM 217
++ + R D R + D P + F + + + D+N
Sbjct: 58 HYKIYNLCAERHYDTAKFNCRVAQYP----FEDHNPP-QLELIKPFCEDLDQWLSEDDN- 111
Query: 218 GPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQTPDQ 274
+HC AG GR+G I C L + + E+R + P Q
Sbjct: 112 HVAAIHCKAGKGRTGVMI---CAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQ 165
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 40.5 bits (94), Expect = 2e-04
Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 24/128 (18%)
Query: 147 VNLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRA 206
+ L E N + + IR+ F + V + ++
Sbjct: 38 IYLCPEPYPESNLQFLKSNGIRL-----------FQFGIEGNKEPFVNIPDHKIRMALKV 86
Query: 207 VRKSGALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRM 266
+ LDE P ++HC G R+G LV C+ KL + I E + +
Sbjct: 87 L-----LDEKNHPVLIHCKRGKHRTGC--LVGCLRKL------QKWCLTSIFDEYQRFAA 133
Query: 267 GLIQTPDQ 274
+ DQ
Sbjct: 134 AKARVSDQ 141
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 40.9 bits (95), Expect = 2e-04
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 321 RKRKTEEKAERIAEKVKQIKKKQSEAEDKKKKSLE 355
RK + EE+ +R+ E K + E +K KK LE
Sbjct: 88 RKWR-EEQRKRLQELDAASKVMEQEWREKAKKDLE 121
Score = 31.3 bits (70), Expect = 0.29
Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 322 KRKTEEKAERI----AEKVKQIKKKQSEAEDKKKKSLE 355
R T+E E I E+ K++++ + ++ +++ E
Sbjct: 78 DRLTQE-PESIRKWREEQRKRLQELDAASKVMEQEWRE 114
Score = 26.7 bits (58), Expect = 9.7
Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
Query: 321 RKRKTEEKA--------ERIAEKVKQIKKKQSEAEDKKKKSLE 355
+++ EKA +R +E+V++ K A+ + +
Sbjct: 108 MEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPD 150
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 39.5 bits (91), Expect = 0.001
Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 11/126 (8%)
Query: 152 HLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSG 211
LDS Y + ++ K + +WP P L R +
Sbjct: 55 FLDSRHLDHYTV---YNLSPKSYRTAKFHSRVSECSWPIRQAPS-LHNLFAVCRNMYNWL 110
Query: 212 ALDENMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMRHYRMGLIQT 271
+ +VHC G S + + + + + + R G+ +
Sbjct: 111 LQNPK-NVCVVHCLDGRAASSILVGAMFIFCNLYS------TPGPAVRLLYAKRPGIGLS 163
Query: 272 PDQLRF 277
P R+
Sbjct: 164 PSHRRY 169
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 36.6 bits (85), Expect = 0.004
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 6/36 (16%)
Query: 201 LRFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
++F + G VHC AG RS T +
Sbjct: 79 VQFALKYQALG------QCVYVHCKAGRSRSATMVA 108
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 37.7 bits (86), Expect = 0.004
Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 10/130 (7%)
Query: 156 EVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVRKSGALDE 215
+ H +++ + + + D VP LL+FI + D
Sbjct: 60 KTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPT-LVDLLKFIDDAKVWMTSDP 118
Query: 216 NMGPPIVHCSAGIGRSGTFILVDCVLKLISDGEINNVSVQEILLEMR-----HYRMGLIQ 270
+ +H G GR+GT + L E R ++
Sbjct: 119 D-HVIAIHSKGGKGRTGTLV---SSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVE 174
Query: 271 TPDQLRFSYQ 280
T Q+R+
Sbjct: 175 TASQIRYVGY 184
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 35.3 bits (82), Expect = 0.010
Identities = 20/88 (22%), Positives = 28/88 (31%), Gaps = 22/88 (25%)
Query: 149 LSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVR 208
+S+H + I V D I H+ + FI R
Sbjct: 38 ISIHESPQPLLQDITYLRIPVADTPEVP----IKKHF-----------KECI-NFIHCCR 81
Query: 209 KSGALDENMGPPIVHCSAGIGRSGTFIL 236
+G G +VH AGI RS T +
Sbjct: 82 LNG------GNCLVHSFAGISRSTTIVT 103
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 34.3 bits (79), Expect = 0.024
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
F+ + P +VH +AG+ RSG IL
Sbjct: 99 AFLSKCDQRN------EPVLVHSAAGVNRSGAMIL 127
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 34.1 bits (79), Expect = 0.029
Identities = 20/88 (22%), Positives = 30/88 (34%), Gaps = 22/88 (25%)
Query: 149 LSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVR 208
LSVH + I D S + H+ ++ +FI R
Sbjct: 37 LSVHDSARPMLEGVKYLCIPAADSPSQN----LTRHF-----------KESI-KFIHECR 80
Query: 209 KSGALDENMGPPIVHCSAGIGRSGTFIL 236
G +VHC AG+ RS T ++
Sbjct: 81 LRG------ESCLVHCLAGVSRSVTLVI 102
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 34.2 bits (79), Expect = 0.034
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
I +V + G +VHC+AG+ RS T +
Sbjct: 94 DKIHSVSRKH------GATLVHCAAGVSRSATLCI 122
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 33.9 bits (78), Expect = 0.037
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
F+ + P +VHC+AG+ RSG IL
Sbjct: 116 AFLSKCDQRN------EPVLVHCAAGVNRSGAMIL 144
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 33.8 bits (78), Expect = 0.039
Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
+ A + G G +V+C G RS
Sbjct: 80 AAMEAAVRDG------GSCLVYCKNGRSRSAAVCT 108
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 34.4 bits (78), Expect = 0.044
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 149 LSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAVR 208
+ D ++ + +I+ +K+ I DF + +R V
Sbjct: 44 FCLQQDPDLEYFGVDISSIQ----AYAKKYSDIQHIRCEIRDF---DAFDLRMRLPAVVG 96
Query: 209 K-SGALDENMGPPIVHCSAGIGRSGTFIL 236
A+ N G VH +AG+GR+ L
Sbjct: 97 TLYKAVKRNGGVTYVHSTAGMGRAPAVAL 125
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 33.6 bits (77), Expect = 0.055
Identities = 12/82 (14%), Positives = 21/82 (25%), Gaps = 19/82 (23%)
Query: 163 ITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALL--------RFIRAVRKSGALD 214
I V ++ + V Y + + I A
Sbjct: 66 FDVVINVAEEANDLRMQVPAVEY-----HHYRWEHDSQIALDLPSLTSIIHAATTKR--- 117
Query: 215 ENMGPPIVHCSAGIGRSGTFIL 236
++H G+ RS T I+
Sbjct: 118 ---EKILIHAQCGLSRSATLII 136
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 32.9 bits (76), Expect = 0.056
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI + G ++HC AG+ RS T ++
Sbjct: 75 FIEEAHQCG------KGLLIHCQAGVSRSATIVI 102
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 33.4 bits (77), Expect = 0.064
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
I +V G ++HC+AG+ RS L
Sbjct: 88 DHIHSVEMKQ------GRTLLHCAAGVSRSAALCL 116
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 33.0 bits (76), Expect = 0.072
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI + G ++HC AG+ RS T ++
Sbjct: 78 EFIEEAHQCG------KGLLIHCQAGVSRSATIVI 106
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 32.6 bits (75), Expect = 0.077
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI + G G +VH +AGI RS F++
Sbjct: 81 EFIDGSLQMG------GKVLVHGNAGISRSAAFVI 109
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 32.5 bits (75), Expect = 0.081
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 6/34 (17%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI +K G +VH G+ RS + ++
Sbjct: 73 FISKAKKHG------SKCLVHSKMGVSRSASTVI 100
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 32.5 bits (75), Expect = 0.087
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI ++ G +VH +AG+ R+ ++
Sbjct: 72 EFIEEAKRKD------GVVLVHSNAGVSRAAAIVI 100
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 32.5 bits (75), Expect = 0.088
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
+I AV+ G +VH AGI RS T L
Sbjct: 73 YIDAVKDCR------GRVLVHSQAGISRSATICL 100
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 32.2 bits (74), Expect = 0.13
Identities = 3/34 (8%), Positives = 11/34 (32%), Gaps = 6/34 (17%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI + ++ G+ ++ ++
Sbjct: 79 FIIRSIQRK------EGVLIISGTGVNKAPAIVI 106
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 32.4 bits (74), Expect = 0.14
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 6/34 (17%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI VR+ G G +VH AGI RS T +
Sbjct: 75 FIDCVREKG------GKVLVHSEAGISRSPTICM 102
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 31.8 bits (73), Expect = 0.16
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 6/34 (17%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI +VH AG+ RS T +
Sbjct: 77 FIDEALSQN------CGVLVHSLAGVSRSVTVTV 104
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.7 bits (68), Expect = 0.34
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 10/31 (32%)
Query: 334 EKVKQIKKKQSE----AEDKK-----KKSLE 355
EK + +KK Q+ A+D K ++E
Sbjct: 18 EK-QALKKLQASLKLYADDSAPALAIKATME 47
Score = 29.5 bits (65), Expect = 1.0
Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 13/35 (37%)
Query: 124 EKNQLKCSQ-----YWPTSSSSDLEFP--DVNLSV 151
EK LK Q Y S+ P + ++
Sbjct: 18 EKQALKKLQASLKLYADDSA------PALAIKATM 46
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 31.2 bits (71), Expect = 0.40
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI AL ++ +VHC G RS T +L
Sbjct: 130 FIDR-----ALSDDHSKILVHCVMGRSRSATLVL 158
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 30.3 bits (69), Expect = 0.46
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 203 FIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI AL + G +VHC+ G+ RS T +L
Sbjct: 76 FIHR-----ALSQPGGKILVHCAVGVSRSATLVL 104
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 30.7 bits (70), Expect = 0.51
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 7/36 (19%)
Query: 202 RFI-RAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
FI +A+ + G +VHC G RS T ++
Sbjct: 105 DFIDQALAQKN------GRVLVHCREGYSRSPTLVI 134
>3lvh_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 9.00A {Bos
taurus}
Length = 205
Score = 30.3 bits (67), Expect = 0.66
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 322 KRKTEEKAERIAEKVKQIKKKQSEAEDKKKKSLE 355
++ EE+ +R+ E K + E +K KK LE
Sbjct: 103 RKWREEQRKRLQELDAASKVMEQEWREKAKKDLE 136
>3iz5_Q 60S ribosomal protein L5 (L18P); eukaryotic ribosome,homology
modeling,de novo modeling,ribos proteins,novel ribosomal
proteins, ribosome; 5.50A {Triticum aestivum} PDB:
3izr_Q
Length = 304
Score = 30.8 bits (69), Expect = 0.67
Identities = 6/37 (16%), Positives = 17/37 (45%)
Query: 319 NPRKRKTEEKAERIAEKVKQIKKKQSEAEDKKKKSLE 355
N +K E++ + E++ + +D +++ E
Sbjct: 268 NLKKLTYEQRKASLVERLNALNSSAGADDDDEEEDDE 304
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 29.7 bits (67), Expect = 0.97
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 202 RFIRAVRKSGALDENMGPPIVHCSAGIGRSGTFIL 236
R+IRA G +VHC+ G+ RS T +L
Sbjct: 121 RYIRAALSVPQ-----GRVLVHCAMGVSRSATLVL 150
>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing
protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A
{Bos taurus} SCOP: a.66.1.1 c.37.1.8 PDB: 1azt_A*
3c14_C* 3c15_C* 3c16_C* 1cjt_C* 1cjk_C* 1cju_C* 1cjv_C*
1tl7_C* 1cs4_C* 1u0h_C* 2gvd_C* 2gvz_C* 3e8a_C* 3g82_C*
3maa_C* 1cul_C* 3sn6_A*
Length = 402
Score = 28.6 bits (63), Expect = 3.2
Identities = 16/85 (18%), Positives = 23/85 (27%), Gaps = 6/85 (7%)
Query: 109 WEQNCKAIVMLNKI------IEKNQLKCSQYWPTSSSSDLEFPDVNLSVHLDSEVNHSYF 162
W + I+ LNK + + K Y+P + YF
Sbjct: 281 WLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYF 340
Query: 163 ITRNIRVTDKESSKERHVILFHYTT 187
I S RH H+T
Sbjct: 341 IRDEFLRISTASGDGRHYCYPHFTC 365
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide,
carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Length = 394
Score = 28.4 bits (64), Expect = 3.5
Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Query: 148 NLSVHLDSEVNHSYFITRNIRVTDKESSKERHVILFHYTTWPDFGVPQSPTALLRFIRAV 207
L L + +FIT + + + + F P AL + V
Sbjct: 35 ELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEV 94
Query: 208 RKSGALDENMGPPIVHC 224
+ LD I+H
Sbjct: 95 AQRENLD------ILHV 105
>2zkr_n 60S ribosomal protein L5; protein-RNA complex, 60S ribosomal
subunit, ribosomal protein/RNA complex; 8.70A {Canis
familiaris}
Length = 297
Score = 28.5 bits (63), Expect = 3.6
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 319 NPRKRKTEEKAERIAEKVKQIKKKQSEAED 348
N K +K +R+A+K + Q A +
Sbjct: 267 NRPKMSLAQKKDRVAQKKASFLRAQERAAE 296
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD,
small molecule, ppiase, cell cycle, nucleus,
phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens}
PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Length = 123
Score = 26.6 bits (59), Expect = 6.4
Identities = 8/51 (15%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 305 LINGNGSTAGVTNNNPRKRKTEEKAERIAEKV-KQIKKKQSE-AEDKKKKS 353
L+ + S + + +T+E+A + ++IK + + + S
Sbjct: 21 LVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFESLASQFS 71
>3cdd_A Prophage MUSO2, 43 kDa tail protein; shewanella oneidensis MR-1,
structural genomics, PSI- protein structure initiative;
HET: MSE; 2.10A {Shewanella oneidensis} SCOP: b.106.1.1
b.106.1.1
Length = 361
Score = 27.5 bits (60), Expect = 6.5
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 229 GRSGTFILVDCVLKLISDGEINNVSVQEILLEM-RHYRMGLIQTPDQLRFSYQAIIEGIH 287
GR T LVDC G+ NN ++ +I + + + + +I D + IE
Sbjct: 95 GRDKTADLVDC-SIDYPSGQFNNQTLTQIADIVCKPFGIKVIVNTDVGEPFQRIQIEQGE 153
Query: 288 TDWET 292
T E
Sbjct: 154 TPHEL 158
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus,
protein transport, translocation, transport, transport
protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Length = 661
Score = 27.3 bits (60), Expect = 8.4
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 13 EFEDIDSKNLWAVVYQRIRTVSNAYDYTLDDAKRSENRHLNRYRDVIPYDHSRIALK--R 70
I+ +WA+++ +R + L ++ + + Y + + K
Sbjct: 146 NLTVINGVPIWALIFYLLR--AGLIKEALQVLVENKANIKKVEQSFLTYFKAYASSKDHG 203
Query: 71 CSNDYINANLVEIEQANR 88
+Y E Q +
Sbjct: 204 LPVEYSTKLHTEYNQHIK 221
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor,
microtubles, motor protein; HET: ADP SPM; 2.81A
{Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C*
Length = 3245
Score = 27.6 bits (61), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 322 KRKTEEKAERIAEKVKQIKKKQSEAEDKKKKSLE 355
R+ + K E+ +K+KQ+ + Q AE K+K + E
Sbjct: 1947 NRELDVKNEQANQKLKQMVQDQQAAEIKQKDARE 1980
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA
splicing, adenine, mRNA processing, nucleus,
phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo
sapiens} PDB: 2f9d_A 2f9j_A 2fho_B
Length = 115
Score = 26.2 bits (58), Expect = 9.0
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 319 NPRKRKTEEKAERIAEKVKQIKKKQSEAEDKKK 351
N + + ++ E++K +K+K D K
Sbjct: 83 NANRAFQKMDTKKKEEQLKLLKEKYGINTDPPK 115
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.267 0.0499 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,429,089
Number of extensions: 322569
Number of successful extensions: 1226
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1027
Number of HSP's successfully gapped: 118
Length of query: 355
Length of database: 6,701,793
Length adjustment: 95
Effective length of query: 260
Effective length of database: 4,049,298
Effective search space: 1052817480
Effective search space used: 1052817480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.7 bits)