BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4349
(80 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|380690603|gb|AFD93370.1| apterous, partial [Cydia pomonella]
Length = 231
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 71/80 (88%), Gaps = 4/80 (5%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
+LH GDLSSSMESL+Y+SGA +SPGS S RTKRMRTSFKHHQLRTMKSYF +NQNP
Sbjct: 155 ILHRGDLSSSMESLAYDSGA--ASPGS--VSSTRTKRMRTSFKHHQLRTMKSYFAVNQNP 210
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
DAKDLKQLAQKTGLSKRVLQ
Sbjct: 211 DAKDLKQLAQKTGLSKRVLQ 230
>gi|328925124|dbj|BAK19077.1| apterous B alpha [Bombyx mori]
Length = 349
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 72/81 (88%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH GDLSSSMESL+Y+S +SPGS V SH QRTKRMRTSFKHHQLRTMKSYF INQN
Sbjct: 203 ILHRGDLSSSMESLAYDSSV--ASPGS-VSSHTQRTKRMRTSFKHHQLRTMKSYFAINQN 259
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 260 PDAKDLKQLAQKTGLSKRVLQ 280
>gi|328925126|dbj|BAK19078.1| apterous B beta [Bombyx mori]
Length = 159
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 72/81 (88%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH GDLSSSMESL+Y+S +SPGS V SH QRTKRMRTSFKHHQLRTMKSYF INQN
Sbjct: 13 ILHRGDLSSSMESLAYDSSV--ASPGS-VSSHTQRTKRMRTSFKHHQLRTMKSYFAINQN 69
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 70 PDAKDLKQLAQKTGLSKRVLQ 90
>gi|345487079|ref|XP_001599685.2| PREDICTED: LIM/homeobox protein Lhx9-like [Nasonia vitripennis]
Length = 406
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 70/81 (86%), Gaps = 3/81 (3%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL+ Y++ G SPG VH +QRTKRMRTSFKHHQLRTMKSYF INQN
Sbjct: 240 LLHPTELSSSMESLAAYDASVG--SPGGPVHQNQRTKRMRTSFKHHQLRTMKSYFAINQN 297
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 298 PDAKDLKQLAQKTGLSKRVLQ 318
>gi|357622661|gb|EHJ74087.1| apterous [Danaus plexippus]
Length = 359
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 71/81 (87%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH DLSSSMESL+Y+S +SPGS V SH QRTKRMRTSFKHHQLRTMKSYF INQN
Sbjct: 204 ILHRADLSSSMESLAYDSSV--ASPGS-VSSHTQRTKRMRTSFKHHQLRTMKSYFAINQN 260
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 261 PDAKDLKQLAQKTGLSKRVLQ 281
>gi|225543484|ref|NP_001139388.1| apterous [Tribolium castaneum]
gi|224459214|gb|ACN43342.1| apterous b [Tribolium castaneum]
Length = 361
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
ML GDLSSSMESLSY+S + + +G H QRTKRMRTSFKHHQLRTMK+YF INQNP
Sbjct: 212 MLQQGDLSSSMESLSYDSSVTSPASSNG-HQPQRTKRMRTSFKHHQLRTMKTYFAINQNP 270
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
DAKDLKQLAQKTGLSKRVLQ
Sbjct: 271 DAKDLKQLAQKTGLSKRVLQ 290
>gi|270004906|gb|EFA01354.1| apterous 2 [Tribolium castaneum]
Length = 150
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
ML GDLSSSMESLSY+S + + +G H QRTKRMRTSFKHHQLRTMK+YF INQNP
Sbjct: 1 MLQQGDLSSSMESLSYDSSVTSPASSNG-HQPQRTKRMRTSFKHHQLRTMKTYFAINQNP 59
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
DAKDLKQLAQKTGLSKRVLQ
Sbjct: 60 DAKDLKQLAQKTGLSKRVLQ 79
>gi|340721020|ref|XP_003398925.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus terrestris]
Length = 391
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL+ YE+ G+ P VH QRTKRMRTSFKHHQLRTMK+YF INQN
Sbjct: 230 LLHPTELSSSMESLAAYEASVGSPGP---VHQSQRTKRMRTSFKHHQLRTMKNYFAINQN 286
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 287 PDAKDLKQLAQKTGLSKRVLQ 307
>gi|350404759|ref|XP_003487211.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus impatiens]
Length = 441
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL+ YE+ G+ P VH QRTKRMRTSFKHHQLRTMK+YF INQN
Sbjct: 280 LLHPTELSSSMESLAAYEASVGSPGP---VHQSQRTKRMRTSFKHHQLRTMKNYFAINQN 336
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 337 PDAKDLKQLAQKTGLSKRVLQ 357
>gi|328787166|ref|XP_003250891.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis mellifera]
Length = 390
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL+ YE+ G+ P VH QRTKRMRTSFKHHQLRTMK+YF INQN
Sbjct: 229 LLHPTELSSSMESLAAYEASVGSPGP---VHQSQRTKRMRTSFKHHQLRTMKNYFAINQN 285
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 286 PDAKDLKQLAQKTGLSKRVLQ 306
>gi|383850874|ref|XP_003700999.1| PREDICTED: LIM/homeobox protein Lhx9-like [Megachile rotundata]
Length = 391
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL+ YE+ G+ P VH QRTKRMRTSFKHHQLRTMK+YF INQN
Sbjct: 230 LLHPTELSSSMESLAAYEASVGSPGP---VHQSQRTKRMRTSFKHHQLRTMKNYFAINQN 286
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 287 PDAKDLKQLAQKTGLSKRVLQ 307
>gi|380027052|ref|XP_003697250.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis florea]
Length = 390
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL+ YE+ G+ P VH QRTKRMRTSFKHHQLRTMK+YF INQN
Sbjct: 229 LLHPTELSSSMESLAAYEASVGSPGP---VHQSQRTKRMRTSFKHHQLRTMKNYFAINQN 285
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 286 PDAKDLKQLAQKTGLSKRVLQ 306
>gi|307166312|gb|EFN60494.1| LIM/homeobox protein Lhx9 [Camponotus floridanus]
Length = 487
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESL-SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL +Y++ G+ P VH QRTKRMRTSFKHHQLRTMK+YF INQN
Sbjct: 326 LLHPTELSSSMESLTAYDASVGSPGP---VHQSQRTKRMRTSFKHHQLRTMKNYFAINQN 382
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 383 PDAKDLKQLAQKTGLSKRVLQ 403
>gi|332018689|gb|EGI59261.1| LIM/homeobox protein Lhx9 [Acromyrmex echinatior]
Length = 274
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 69/81 (85%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+LH +LSSSMESL+ Y++ G+ P VH +QRTKRMRTSFKHHQLRTMK+YF INQN
Sbjct: 113 LLHPTELSSSMESLAAYDASVGSPGP---VHQNQRTKRMRTSFKHHQLRTMKNYFAINQN 169
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 170 PDAKDLKQLAQKTGLSKRVLQ 190
>gi|307196006|gb|EFN77731.1| LIM/homeobox protein Lhx9 [Harpegnathos saltator]
Length = 433
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 4/81 (4%)
Query: 1 MLHSGDLSSSMESLS-YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+L +LSSSMESL+ Y++ G+ P VH QRTKRMRTSFKHHQLRTMK+YF +NQN
Sbjct: 253 LLQPTELSSSMESLAAYDTSVGSPGP---VHQSQRTKRMRTSFKHHQLRTMKTYFALNQN 309
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
PDAKDLKQLAQKTGLSKRVLQ
Sbjct: 310 PDAKDLKQLAQKTGLSKRVLQ 330
>gi|242023961|ref|XP_002432399.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
gi|212517822|gb|EEB19661.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
Length = 383
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 63/80 (78%), Gaps = 7/80 (8%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
MLH +LSSSM+S+SY+ V S Q TKRMRTSFKHHQLRTMKSYF INQNP
Sbjct: 220 MLHPNELSSSMDSISYDGPLT-------VPSQQSTKRMRTSFKHHQLRTMKSYFAINQNP 272
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
DAKDLKQLAQKTGLSKRVLQ
Sbjct: 273 DAKDLKQLAQKTGLSKRVLQ 292
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 69/91 (75%), Gaps = 11/91 (12%)
Query: 1 MLHSGDLSSSMESLSYESGAG---------NSSPGSGVHSHQ--RTKRMRTSFKHHQLRT 49
++ + DLSSSMESL+YE+ + ++ G HQ RTKRMRTSFKHHQLRT
Sbjct: 209 VMQATDLSSSMESLTYETSSLSSPTNSSTMGTTGGMSQQQHQQTRTKRMRTSFKHHQLRT 268
Query: 50 MKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
MKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ
Sbjct: 269 MKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 299
>gi|158299661|ref|XP_319729.4| AGAP008979-PA [Anopheles gambiae str. PEST]
gi|157013624|gb|EAA14879.4| AGAP008979-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 10 SMESLSYESGAGNSSPGSG--VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
S+ SL + G+ SPGSG + + RTKRMRTSFKHHQLRTMKSYF INQNPDAKDLKQ
Sbjct: 197 SVNSLDLSTYDGSQSPGSGGALTPNCRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQ 256
Query: 68 LAQKTGLSKRVLQ 80
LAQKTGLSKRVLQ
Sbjct: 257 LAQKTGLSKRVLQ 269
>gi|157119548|ref|XP_001659418.1| lim homeobox protein [Aedes aegypti]
gi|108875286|gb|EAT39511.1| AAEL008685-PA [Aedes aegypti]
Length = 345
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
Query: 7 LSSSMESLSYESGAGNSSPGSG--VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
+++ SL S G+ SPGSG + + RTKRMRTSFKHHQLRTMKSYF INQNPDAKD
Sbjct: 192 MTAGPSSLDLSSYDGSQSPGSGGTLTPNCRTKRMRTSFKHHQLRTMKSYFAINQNPDAKD 251
Query: 65 LKQLAQKTGLSKRVLQ 80
LKQLAQKTGLSKRVLQ
Sbjct: 252 LKQLAQKTGLSKRVLQ 267
>gi|170048222|ref|XP_001870660.1| lim homeobox protein [Culex quinquefasciatus]
gi|167870354|gb|EDS33737.1| lim homeobox protein [Culex quinquefasciatus]
Length = 338
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Query: 21 GNSSPGSG--VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
G+ SPGSG + + RTKRMRTSFKHHQLRTMKSYF INQNPDAKDLKQLAQKTGLSKRV
Sbjct: 185 GSQSPGSGGTLTPNCRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRV 244
Query: 79 LQ 80
LQ
Sbjct: 245 LQ 246
>gi|241753309|ref|XP_002401118.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215508343|gb|EEC17797.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 357
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 57/76 (75%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
G+ S+ L+ G G S+ QRTKRMRTSFKHHQLRTMKSYF INQNPDAKD
Sbjct: 223 GEEGVSLPDLASLDGNGPSALQQQQQQQQRTKRMRTSFKHHQLRTMKSYFAINQNPDAKD 282
Query: 65 LKQLAQKTGLSKRVLQ 80
LKQLAQKTGLSKRVLQ
Sbjct: 283 LKQLAQKTGLSKRVLQ 298
>gi|1742937|emb|CAA71049.1| Af-ap [Artemia franciscana]
Length = 267
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
Query: 20 AGNSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
+G S G VH + QRTKRMRTSFKHHQLRTMKSYF INQNPDAKDLKQLAQKTGLSKRV
Sbjct: 204 SGYESSGGQVHGNSQRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRV 263
Query: 79 LQ 80
LQ
Sbjct: 264 LQ 265
>gi|23893429|emb|CAD12364.1| apterous-2 [Cupiennius salei]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 52/61 (85%), Gaps = 2/61 (3%)
Query: 22 NSSPGSGVHS--HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
NS P G++ QRTKRMRTSFKHHQLRTMKSYF INQNPDAKDLKQLA KTGLSKRVL
Sbjct: 155 NSGPSGGLNPSGPQRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLASKTGLSKRVL 214
Query: 80 Q 80
Q
Sbjct: 215 Q 215
>gi|391341454|ref|XP_003745045.1| PREDICTED: LIM/homeobox protein Lhx9-like [Metaseiulus
occidentalis]
Length = 343
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 47/48 (97%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
QRTKRMRTSFKHHQLRTMK+YF INQNPDAKDLKQLAQKTGLSKRVLQ
Sbjct: 238 QRTKRMRTSFKHHQLRTMKTYFGINQNPDAKDLKQLAQKTGLSKRVLQ 285
>gi|224994808|ref|NP_001139341.1| apterous a [Tribolium castaneum]
gi|224459212|gb|ACN43341.1| apterous a [Tribolium castaneum]
Length = 465
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 60/77 (77%), Gaps = 7/77 (9%)
Query: 6 DLSSSMESLSYESGAGNSSPGS-GVH-SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
DL+S +S+ SPG+ G+H S QRTKRMRTSFKHHQLRTMKSYF IN NPDAK
Sbjct: 323 DLNSDYLDMSF-----GRSPGTPGMHGSSQRTKRMRTSFKHHQLRTMKSYFAINHNPDAK 377
Query: 64 DLKQLAQKTGLSKRVLQ 80
DLKQL+QKTGL KRVLQ
Sbjct: 378 DLKQLSQKTGLPKRVLQ 394
>gi|290753132|dbj|BAI79511.1| apterous [Pedetontus unimaculatus]
Length = 222
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 19 GAGNSSPG-SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
GA SP G++ QRTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KR
Sbjct: 154 GAPGPSPTLPGLNGQQRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKR 213
Query: 78 VLQ 80
VLQ
Sbjct: 214 VLQ 216
>gi|299115102|dbj|BAJ09782.1| apterous 1 [Daphnia magna]
Length = 468
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 46/47 (97%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLRTMKSYF INQNPDAKDLKQLAQKTGLSKRVLQ
Sbjct: 402 RTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQ 448
>gi|351702111|gb|EHB05030.1| LIM/homeobox protein Lhx2 [Heterocephalus glaber]
Length = 502
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 358 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 407
>gi|321454678|gb|EFX65839.1| hypothetical protein DAPPUDRAFT_65174 [Daphnia pulex]
Length = 291
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/47 (97%), Positives = 46/47 (97%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLRTMKSYF INQNPDAKDLKQLAQKTGLSKRVLQ
Sbjct: 224 RTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQ 270
>gi|410979132|ref|XP_003995940.1| PREDICTED: LIM/homeobox protein Lhx2 [Felis catus]
Length = 484
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 221 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 270
>gi|449268595|gb|EMC79451.1| LIM/homeobox protein Lhx2 [Columba livia]
Length = 416
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 272 SNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 321
>gi|224073927|ref|XP_002191376.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Taeniopygia
guttata]
Length = 436
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 292 SNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 341
>gi|449478340|ref|XP_004175607.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Taeniopygia
guttata]
Length = 399
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 255 SNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 304
>gi|45382441|ref|NP_990220.1| LIM/homeobox protein Lhx2 [Gallus gallus]
gi|2340819|dbj|BAA21846.1| LIM homeodomain [Gallus gallus]
Length = 400
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 SNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 305
>gi|328787176|ref|XP_392622.4| PREDICTED: protein apterous [Apis mellifera]
Length = 560
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
DL++ + + G G ++PG S+ RTKRMRTSFKHHQLRTMKSYF IN NPDAKDL
Sbjct: 417 DLNADYIDMPFGRG-GPATPGI-PGSNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 474
Query: 66 KQLAQKTGLSKRVLQ 80
KQL+QKTGL KRVLQ
Sbjct: 475 KQLSQKTGLPKRVLQ 489
>gi|444707251|gb|ELW48535.1| LIM/homeobox protein Lhx2 [Tupaia chinensis]
Length = 442
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 298 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 347
>gi|326930544|ref|XP_003211406.1| PREDICTED: LIM/homeobox protein Lhx2-like [Meleagris gallopavo]
Length = 267
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 123 SNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 172
>gi|190338019|gb|AAI62549.1| LIM homeobox 2 [Danio rerio]
Length = 396
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 5 GDLSSSMESLSYESGAGNS-SPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
DL++ +LS G++ S S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAK
Sbjct: 224 ADLAAYNAALSCNENDGDAMDRDSQYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAK 283
Query: 64 DLKQLAQKTGLSKRVLQ 80
DLKQLAQKTGL+KRVLQ
Sbjct: 284 DLKQLAQKTGLTKRVLQ 300
>gi|380027050|ref|XP_003697249.1| PREDICTED: protein apterous-like [Apis florea]
Length = 555
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
DL++ + + G G ++PG S+ RTKRMRTSFKHHQLRTMKSYF IN NPDAKDL
Sbjct: 412 DLNADYIDMPFGRG-GPATPGI-PGSNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 469
Query: 66 KQLAQKTGLSKRVLQ 80
KQL+QKTGL KRVLQ
Sbjct: 470 KQLSQKTGLPKRVLQ 484
>gi|348535176|ref|XP_003455077.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oreochromis niloticus]
Length = 417
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 272 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 321
>gi|327290044|ref|XP_003229734.1| PREDICTED: LIM/homeobox protein Lhx2-like, partial [Anolis
carolinensis]
Length = 163
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 19 SNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 68
>gi|383850854|ref|XP_003700989.1| PREDICTED: protein apterous-like [Megachile rotundata]
Length = 620
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
DL++ + + G G ++PG S+ RTKRMRTSFKHHQLRTMKSYF IN NPDAKDL
Sbjct: 477 DLNADYIDMPFGRG-GPATPGI-PGSNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 534
Query: 66 KQLAQKTGLSKRVLQ 80
KQL+QKTGL KRVLQ
Sbjct: 535 KQLSQKTGLPKRVLQ 549
>gi|187171273|ref|NP_001035099.3| LIM/homeobox protein Lhx2 [Danio rerio]
Length = 427
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 282 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 331
>gi|355567447|gb|EHH23788.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|410929509|ref|XP_003978142.1| PREDICTED: LIM/homeobox protein Lhx2-like [Takifugu rubripes]
Length = 417
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 272 STQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 321
>gi|350404757|ref|XP_003487210.1| PREDICTED: protein apterous-like [Bombus impatiens]
Length = 550
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 59/76 (77%), Gaps = 4/76 (5%)
Query: 6 DLSSSMESLSYESGAGNSSPG-SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
DL++ + + G G ++PG G +S RTKRMRTSFKHHQLRTMKSYF IN NPDAKD
Sbjct: 407 DLNADYIDMPFGRG-GPATPGIPGANS--RTKRMRTSFKHHQLRTMKSYFAINHNPDAKD 463
Query: 65 LKQLAQKTGLSKRVLQ 80
LKQL+QKTGL KRVLQ
Sbjct: 464 LKQLSQKTGLPKRVLQ 479
>gi|345322211|ref|XP_003430546.1| PREDICTED: LIM/homeobox protein Lhx2-like [Ornithorhynchus
anatinus]
Length = 394
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 250 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 299
>gi|76667074|dbj|BAE45356.1| LIM homeodomain type transcription factor Lhx2 [Danio rerio]
Length = 395
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 250 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 299
>gi|55846760|gb|AAV67384.1| LIM homeobox protein 2 [Macaca fascicularis]
Length = 176
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 48 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 97
>gi|355699334|gb|AES01093.1| LIM homeobox 2 [Mustela putorius furo]
Length = 203
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 55 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 104
>gi|47214973|emb|CAG01307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 396
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 251 STQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 300
>gi|290753134|dbj|BAI79512.1| apterous [Ephoron eophilum]
Length = 248
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+G PGS S QRTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KR
Sbjct: 180 AGPSPGMPGSNGQS-QRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKR 238
Query: 78 VLQ 80
VLQ
Sbjct: 239 VLQ 241
>gi|195353746|ref|XP_002043364.1| GM16501 [Drosophila sechellia]
gi|194127487|gb|EDW49530.1| GM16501 [Drosophila sechellia]
Length = 535
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 424 GSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 478
>gi|133778048|gb|AAI27382.2| LIM homeobox 2 [Danio rerio]
gi|182888988|gb|AAI64490.1| Lhx2 protein [Danio rerio]
Length = 396
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 251 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 300
>gi|426223060|ref|XP_004005697.1| PREDICTED: LIM/homeobox protein Lhx2 [Ovis aries]
Length = 404
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 260 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 309
>gi|345806104|ref|XP_548461.3| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Canis lupus
familiaris]
Length = 397
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 253 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 302
>gi|75993708|gb|ABA33890.1| lim homeobox transcription factor 2 [Danio rerio]
Length = 396
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 251 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 300
>gi|6754538|ref|NP_034840.1| LIM/homeobox protein Lhx2 [Mus musculus]
gi|157817308|ref|NP_001100041.1| LIM/homeobox protein Lhx2 [Rattus norvegicus]
gi|8134552|sp|Q9Z0S2.1|LHX2_MOUSE RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|4406516|gb|AAD20012.1| LIM-homeodomain protein MLHX2 [Mus musculus]
gi|26343551|dbj|BAC35432.1| unnamed protein product [Mus musculus]
gi|33416474|gb|AAH55741.1| LIM homeobox protein 2 [Mus musculus]
gi|149047902|gb|EDM00518.1| LIM homeobox protein 2 (predicted) [Rattus norvegicus]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|260794981|ref|XP_002592485.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277705|gb|EEN48496.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 452
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 50/60 (83%), Gaps = 3/60 (5%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G +SPG H QR KRMRTSFKHHQLR MKSYF +N NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 249 GGNSPG---HQPQRQKRMRTSFKHHQLRAMKSYFALNHNPDAKDLKQLAQKTGLTKRVLQ 305
>gi|354498706|ref|XP_003511455.1| PREDICTED: LIM/homeobox protein Lhx2-like [Cricetulus griseus]
Length = 475
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 331 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 380
>gi|440908262|gb|ELR58305.1| LIM/homeobox protein Lhx2, partial [Bos grunniens mutus]
Length = 410
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 266 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 315
>gi|403299864|ref|XP_003940694.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 253 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 302
>gi|397473228|ref|XP_003808119.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pan paniscus]
gi|426362990|ref|XP_004048631.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Gorilla gorilla
gorilla]
gi|21753589|dbj|BAC04371.1| unnamed protein product [Homo sapiens]
gi|119607983|gb|EAW87577.1| LIM homeobox 2, isoform CRA_b [Homo sapiens]
Length = 397
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 253 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 302
>gi|432095435|gb|ELK26634.1| LIM/homeobox protein Lhx2 [Myotis davidii]
Length = 389
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 245 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 294
>gi|4406518|gb|AAD20013.1| LIM-homeodomain protein HLHX2 [Homo sapiens]
Length = 389
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 245 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 294
>gi|291408369|ref|XP_002720520.1| PREDICTED: LIM homeobox protein 2-like [Oryctolagus cuniculus]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|146331998|gb|ABQ22505.1| LIM homeobox protein Lhx2-like protein [Callithrix jacchus]
Length = 197
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 53 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 102
>gi|344243883|gb|EGV99986.1| LIM/homeobox protein Lhx2 [Cricetulus griseus]
Length = 385
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 241 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 290
>gi|193786574|dbj|BAG51357.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|431898812|gb|ELK07182.1| LIM/homeobox protein Lhx2 [Pteropus alecto]
Length = 414
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 270 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 319
>gi|432876050|ref|XP_004072952.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oryzias latipes]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 272 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 321
>gi|403299862|ref|XP_003940693.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|332229975|ref|XP_003264161.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Nomascus
leucogenys]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|301769255|ref|XP_002920044.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 1 [Ailuropoda
melanoleuca]
gi|345806102|ref|XP_863668.2| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Canis lupus
familiaris]
gi|281350174|gb|EFB25758.1| hypothetical protein PANDA_008723 [Ailuropoda melanoleuca]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|395824161|ref|XP_003785339.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Otolemur garnettii]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|30795196|ref|NP_004780.3| LIM/homeobox protein Lhx2 [Homo sapiens]
gi|297685314|ref|XP_002820237.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pongo abelii]
gi|397473226|ref|XP_003808118.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pan paniscus]
gi|426362988|ref|XP_004048630.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Gorilla gorilla
gorilla]
gi|8247936|sp|P50458.2|LHX2_HUMAN RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|62739692|gb|AAH93662.1| LIM homeobox 2 [Homo sapiens]
gi|85567249|gb|AAI12186.1| LIM homeobox protein 2 [Homo sapiens]
gi|119607982|gb|EAW87576.1| LIM homeobox 2, isoform CRA_a [Homo sapiens]
gi|167773563|gb|ABZ92216.1| LIM homeobox 2 [synthetic construct]
gi|261859194|dbj|BAI46119.1| LIM homeobox 2 [synthetic construct]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|395824163|ref|XP_003785340.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Otolemur garnettii]
Length = 414
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 270 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 319
>gi|395505659|ref|XP_003757157.1| PREDICTED: LIM/homeobox protein Lhx2 [Sarcophilus harrisii]
Length = 408
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 264 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 313
>gi|123299964|dbj|BAF45328.1| LIM homeobox protein 2 [Sus scrofa]
Length = 373
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|297685312|ref|XP_002820236.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pongo abelii]
Length = 414
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 270 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 319
>gi|281427312|ref|NP_001163990.1| LIM/homeobox protein Lhx2 [Sus scrofa]
gi|300794175|ref|NP_001178104.1| LIM/homeobox protein Lhx2 [Bos taurus]
gi|239937382|dbj|BAH79127.1| LIM homeobox protein 2 [Sus scrofa]
gi|296482193|tpg|DAA24308.1| TPA: LIM homeobox protein 2-like [Bos taurus]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|387763115|ref|NP_001248721.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
gi|402896424|ref|XP_003911300.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Papio anubis]
gi|380818036|gb|AFE80892.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|332229977|ref|XP_003264162.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Nomascus
leucogenys]
Length = 414
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 270 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 319
>gi|402896426|ref|XP_003911301.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Papio anubis]
Length = 414
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 270 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 319
>gi|348570108|ref|XP_003470839.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Cavia porcellus]
Length = 406
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 262 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|508712|gb|AAB08752.1| LIM-homeobox domain protein [Homo sapiens]
Length = 423
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 260 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 309
>gi|301769257|ref|XP_002920045.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 2 [Ailuropoda
melanoleuca]
Length = 404
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 260 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 309
>gi|126294098|ref|XP_001365314.1| PREDICTED: LIM/homeobox protein Lhx2-like [Monodelphis domestica]
Length = 408
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 264 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 313
>gi|348570110|ref|XP_003470840.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 3 [Cavia porcellus]
Length = 404
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 260 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 309
>gi|296190791|ref|XP_002743350.1| PREDICTED: LIM/homeobox protein Lhx2 [Callithrix jacchus]
Length = 365
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 221 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 270
>gi|355753040|gb|EHH57086.1| hypothetical protein EGM_06651, partial [Macaca fascicularis]
Length = 398
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 254 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|34733871|gb|AAQ81868.1| LIM homeobox gene protein 2 [Ambystoma mexicanum]
Length = 398
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 254 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|114626624|ref|XP_528427.2| PREDICTED: LIM/homeobox protein Lhx2 [Pan troglodytes]
Length = 365
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 221 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 270
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 375 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 422
>gi|344271943|ref|XP_003407796.1| PREDICTED: LIM/homeobox protein Lhx2 [Loxodonta africana]
Length = 365
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 221 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 270
>gi|338720511|ref|XP_001502198.3| PREDICTED: LIM/homeobox protein Lhx2-like [Equus caballus]
Length = 373
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 229 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 278
>gi|281360182|ref|NP_001163058.1| apterous, isoform C [Drosophila melanogaster]
gi|17862966|gb|AAL39960.1| SD05618p [Drosophila melanogaster]
gi|272432345|gb|ACZ94338.1| apterous, isoform C [Drosophila melanogaster]
Length = 468
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 357 GSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 411
>gi|195475694|ref|XP_002090119.1| GE19443 [Drosophila yakuba]
gi|194176220|gb|EDW89831.1| GE19443 [Drosophila yakuba]
Length = 469
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 358 GSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 412
>gi|348570106|ref|XP_003470838.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Cavia porcellus]
Length = 404
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 260 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 309
>gi|24585889|ref|NP_724428.1| apterous, isoform A [Drosophila melanogaster]
gi|195580840|ref|XP_002080242.1| GD10352 [Drosophila simulans]
gi|231559|sp|P29673.1|APTE_DROME RecName: Full=Protein apterous
gi|7601|emb|CAA46276.1| developmental regulatory protein [Drosophila melanogaster]
gi|157822|gb|AAA28673.1| LIM-homeodomain apterous protein [Drosophila melanogaster]
gi|7302219|gb|AAF57314.1| apterous, isoform A [Drosophila melanogaster]
gi|28912908|gb|AAO61758.1| HL02012p [Drosophila melanogaster]
gi|194192251|gb|EDX05827.1| GD10352 [Drosophila simulans]
gi|220942502|gb|ACL83794.1| ap-PA [synthetic construct]
gi|220952712|gb|ACL88899.1| ap-PA [synthetic construct]
Length = 469
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 358 GSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 412
>gi|194864184|ref|XP_001970812.1| ap [Drosophila erecta]
gi|190662679|gb|EDV59871.1| ap [Drosophila erecta]
Length = 469
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 358 GSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 412
>gi|426240153|ref|XP_004013978.1| PREDICTED: LIM/homeobox protein Lhx9 [Ovis aries]
Length = 393
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 261 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 308
>gi|547852|sp|P36198.1|LHX2_RAT RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
Length = 426
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 47/50 (94%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 260 SSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 309
>gi|224471838|sp|A0JNI8.2|LHX9_BOVIN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|110665672|gb|ABG81482.1| LIM homeobox 9 [Bos taurus]
Length = 397
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|431921900|gb|ELK19103.1| LIM/homeobox protein Lhx9 [Pteropus alecto]
Length = 479
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 347 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 394
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 264 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|440904877|gb|ELR55334.1| LIM/homeobox protein Lhx9 [Bos grunniens mutus]
Length = 397
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|114571656|ref|XP_001139158.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan troglodytes]
Length = 399
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 267 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 314
>gi|403307412|ref|XP_003944189.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 399
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 267 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 314
>gi|397505116|ref|XP_003823119.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Pan paniscus]
gi|441624364|ref|XP_004088986.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Nomascus
leucogenys]
Length = 399
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 267 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 314
>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/49 (89%), Positives = 47/49 (95%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 276 NQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 324
>gi|281354175|gb|EFB29759.1| hypothetical protein PANDA_007956 [Ailuropoda melanoleuca]
Length = 382
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|118791388|ref|XP_552873.2| AGAP008980-PA [Anopheles gambiae str. PEST]
gi|116117575|gb|EAL38999.2| AGAP008980-PA [Anopheles gambiae str. PEST]
Length = 267
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 56/80 (70%), Gaps = 9/80 (11%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
M S DL++ L + G G+SS R KRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 141 MTASLDLNTEYLDLGFSRGLGSSS---------RAKRMRTSFKHHQLRTMKSYFAINHNP 191
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
DAKDLKQL+QKTGL KRVLQ
Sbjct: 192 DAKDLKQLSQKTGLPKRVLQ 211
>gi|351708127|gb|EHB11046.1| LIM/homeobox protein Lhx9 [Heterocephalus glaber]
Length = 397
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|348578260|ref|XP_003474901.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cavia
porcellus]
Length = 397
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|395838925|ref|XP_003792355.1| PREDICTED: LIM/homeobox protein Lhx9 [Otolemur garnettii]
Length = 397
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|326924940|ref|XP_003208680.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Meleagris
gallopavo]
Length = 338
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 206 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 253
>gi|117306370|gb|AAI26705.1| LHX9 protein [Bos taurus]
Length = 388
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|123907024|sp|Q1LWV4.1|LHX9_DANRE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|94732381|emb|CAK04966.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
gi|190339118|gb|AAI63023.1| Lhx9 protein [Danio rerio]
gi|190339147|gb|AAI63060.1| Lhx9 protein [Danio rerio]
gi|190339149|gb|AAI63073.1| Lhx9 protein [Danio rerio]
Length = 396
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|9409734|emb|CAB98128.1| LIM-homeobox 9 [Homo sapiens]
Length = 257
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 107 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 154
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 268 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 315
>gi|291402696|ref|XP_002717724.1| PREDICTED: LIM homeobox protein 9-like isoform 2 [Oryctolagus
cuniculus]
Length = 388
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|410986204|ref|XP_003999402.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Felis catus]
Length = 380
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 248 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 295
>gi|126306413|ref|XP_001367734.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Monodelphis
domestica]
gi|395531043|ref|XP_003767592.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sarcophilus
harrisii]
Length = 388
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|403307414|ref|XP_003944190.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 388
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|348578262|ref|XP_003474902.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cavia
porcellus]
Length = 388
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|344276910|ref|XP_003410248.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Loxodonta africana]
Length = 380
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 248 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 295
>gi|335296199|ref|XP_003130643.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sus scrofa]
Length = 399
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 267 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 314
>gi|291402694|ref|XP_002717723.1| PREDICTED: LIM homeobox protein 9-like isoform 1 [Oryctolagus
cuniculus]
Length = 397
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|296230329|ref|XP_002760660.1| PREDICTED: LIM/homeobox protein Lhx9 [Callithrix jacchus]
Length = 388
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|33569216|ref|NP_064589.2| LIM/homeobox protein Lhx9 isoform 1 [Homo sapiens]
gi|73960328|ref|XP_848787.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Canis lupus
familiaris]
gi|332230752|ref|XP_003264559.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Nomascus
leucogenys]
gi|224471883|sp|Q9NQ69.3|LHX9_HUMAN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|33416232|gb|AAP32471.2| LIM-homeobox 9 protein [Homo sapiens]
gi|119611696|gb|EAW91290.1| LIM homeobox 9, isoform CRA_d [Homo sapiens]
gi|124297089|gb|AAI31623.1| LIM homeobox 9 [Homo sapiens]
gi|355558916|gb|EHH15696.1| hypothetical protein EGK_01820 [Macaca mulatta]
gi|355746065|gb|EHH50690.1| hypothetical protein EGM_01558 [Macaca fascicularis]
Length = 397
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|149743835|ref|XP_001492921.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Equus caballus]
Length = 388
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|62241033|ref|NP_001014434.1| LIM/homeobox protein Lhx9 isoform 2 [Homo sapiens]
gi|114571650|ref|XP_525011.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 6 [Pan troglodytes]
gi|297281170|ref|XP_001110674.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Macaca mulatta]
gi|395729258|ref|XP_002809704.2| PREDICTED: LIM/homeobox protein Lhx9 [Pongo abelii]
gi|397505118|ref|XP_003823120.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan paniscus]
gi|402857736|ref|XP_003893401.1| PREDICTED: LIM/homeobox protein Lhx9 [Papio anubis]
gi|426333155|ref|XP_004028150.1| PREDICTED: LIM/homeobox protein Lhx9 [Gorilla gorilla gorilla]
gi|9367761|emb|CAB97493.1| LIM-homeobox 9 [Homo sapiens]
gi|119611697|gb|EAW91291.1| LIM homeobox 9, isoform CRA_e [Homo sapiens]
Length = 388
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|410986202|ref|XP_003999401.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Felis catus]
Length = 388
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|66792874|ref|NP_001019715.1| LIM/homeobox protein Lhx9 [Bos taurus]
gi|61555226|gb|AAX46681.1| LIM homeobox 9 [Bos taurus]
gi|296478851|tpg|DAA20966.1| TPA: LIM/homeobox protein Lhx9 [Bos taurus]
Length = 378
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|225708026|gb|ACO09859.1| LIM/homeobox protein Lhx9 [Osmerus mordax]
Length = 317
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 264 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>gi|157119550|ref|XP_001659419.1| lim homeobox protein [Aedes aegypti]
gi|108875287|gb|EAT39512.1| AAEL008694-PA [Aedes aegypti]
Length = 245
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 56/80 (70%), Gaps = 9/80 (11%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
M S DL++ L + G G+SS R KRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 119 MTASLDLNTEYLDLGFSRGLGSSS---------RAKRMRTSFKHHQLRTMKSYFAINHNP 169
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
DAKDLKQL+QKTGL KRVLQ
Sbjct: 170 DAKDLKQLSQKTGLPKRVLQ 189
>gi|344276912|ref|XP_003410249.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Loxodonta africana]
Length = 388
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|126306417|ref|XP_001367814.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Monodelphis
domestica]
Length = 380
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 248 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 295
>gi|354485102|ref|XP_003504723.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cricetulus
griseus]
Length = 397
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|345306379|ref|XP_001506055.2| PREDICTED: LIM/homeobox protein Lhx9-like [Ornithorhynchus
anatinus]
Length = 303
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 171 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 218
>gi|119611694|gb|EAW91288.1| LIM homeobox 9, isoform CRA_b [Homo sapiens]
Length = 378
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|395531047|ref|XP_003767594.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Sarcophilus
harrisii]
Length = 380
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 248 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 295
>gi|311213854|ref|NP_001185656.1| LIM homeobox 9 [Taeniopygia guttata]
Length = 378
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|29570244|gb|AAO85392.1| LIM-homeobox protein 9 [Sus scrofa]
Length = 369
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|345803062|ref|XP_857156.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 4 [Canis lupus
familiaris]
Length = 380
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 248 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 295
>gi|110611159|ref|NP_001036042.1| LIM/homeobox protein Lhx9 isoform c [Mus musculus]
gi|224471884|sp|Q9WUH2.3|LHX9_MOUSE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|13509271|emb|CAC35216.1| Lhx2 protein [Xenopus laevis]
Length = 96
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHS-HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
DL++ +LS+ G+ ++ +Q+TKRMRTSFKHHQLRTMKSYF IN NPDAK
Sbjct: 19 ADLAAYNAALSFNENDGDHMDRDQQYTPNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAK 78
Query: 64 DLKQLAQKTGLSKRVLQ 80
DLKQLAQKTGL+KRVLQ
Sbjct: 79 DLKQLAQKTGLTKRVLQ 95
>gi|444717046|gb|ELW57882.1| LIM/homeobox protein Lhx9 [Tupaia chinensis]
Length = 378
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|6180221|emb|CAB59908.1| putative LIM homeodomain protein [Mus musculus]
Length = 366
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 234 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 281
>gi|148224455|ref|NP_001087527.1| LIM/homeobox protein Lhx9 [Xenopus laevis]
gi|82198794|sp|Q68EY3.1|LHX9_XENLA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|51258697|gb|AAH80067.1| Lhx9 protein [Xenopus laevis]
Length = 331
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 266 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 313
>gi|62955397|ref|NP_001017710.1| LIM/homeobox protein Lhx9 isoform 1 [Danio rerio]
gi|62205415|gb|AAH93258.1| LIM homeobox 9 [Danio rerio]
Length = 330
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|194758260|ref|XP_001961380.1| GF13843 [Drosophila ananassae]
gi|190622678|gb|EDV38202.1| GF13843 [Drosophila ananassae]
Length = 469
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 358 GSHMSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 412
>gi|27923333|gb|AAO27570.1| LIM-homeodomain type transcription factor Lhx9 [Rattus norvegicus]
Length = 325
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 234 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 281
>gi|335296201|ref|XP_003357709.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sus scrofa]
Length = 388
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|301605174|ref|XP_002932200.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 331
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 266 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 313
>gi|449268141|gb|EMC79011.1| LIM/homeobox protein Lhx9 [Columba livia]
Length = 378
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|327277798|ref|XP_003223650.1| PREDICTED: LIM/homeobox protein Lhx9-like, partial [Anolis
carolinensis]
Length = 279
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 147 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 194
>gi|301605176|ref|XP_002932201.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 266 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 313
>gi|432092293|gb|ELK24915.1| LIM/homeobox protein Lhx9, partial [Myotis davidii]
Length = 420
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 206 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 253
>gi|348536385|ref|XP_003455677.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Oreochromis
niloticus]
Length = 320
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 267 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 314
>gi|31077136|ref|NP_852032.1| LIM/homeobox protein Lhx9 [Rattus norvegicus]
gi|81895227|sp|Q80W90.1|LHX9_RAT RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|30525882|gb|AAP32472.1| LIM-homeodomain type transcription factor Lhx9 [Rattus norvegicus]
Length = 388
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|432854592|ref|XP_004067977.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Oryzias latipes]
Length = 380
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 249 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 296
>gi|326924942|ref|XP_003208681.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Meleagris
gallopavo]
Length = 271
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 206 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 253
>gi|301767830|ref|XP_002919335.1| PREDICTED: LIM/homeobox protein Lhx9-like [Ailuropoda melanoleuca]
Length = 447
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|215276334|gb|ACJ65031.1| LHX9 [Xenopus laevis]
Length = 399
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 267 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 314
>gi|291402698|ref|XP_002717725.1| PREDICTED: LIM homeobox protein 9-like isoform 3 [Oryctolagus
cuniculus]
Length = 321
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|126306415|ref|XP_001367775.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Monodelphis
domestica]
gi|395531045|ref|XP_003767593.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sarcophilus
harrisii]
Length = 321
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|432854590|ref|XP_004067976.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Oryzias latipes]
Length = 378
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 247 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 294
>gi|348578264|ref|XP_003474903.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Cavia
porcellus]
Length = 321
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|291290877|ref|NP_001167469.1| LIM homeobox 2 [Xenopus laevis]
gi|37720481|gb|AAN41461.1| LIM homeobox protein 2 [Xenopus laevis]
Length = 419
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 48/50 (96%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+Q++KRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 275 SNQKSKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 324
>gi|148707589|gb|EDL39536.1| LIM homeobox protein 9, isoform CRA_a [Mus musculus]
Length = 342
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|70909340|ref|NP_001020736.1| LIM/homeobox protein Lhx9 isoform a [Mus musculus]
gi|49119043|gb|AAH72623.1| LIM homeobox protein 9 [Mus musculus]
Length = 330
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|119611698|gb|EAW91292.1| LIM homeobox 9, isoform CRA_f [Homo sapiens]
Length = 321
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|149058475|gb|EDM09632.1| LIM homeobox 9, isoform CRA_a [Rattus norvegicus]
gi|149058478|gb|EDM09635.1| LIM homeobox 9, isoform CRA_a [Rattus norvegicus]
Length = 349
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 217 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 264
>gi|4530371|gb|AAD22008.1| LIM homeobox protein 9 [Mus musculus]
Length = 378
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|348536383|ref|XP_003455676.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Oreochromis
niloticus]
Length = 333
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 268 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 315
>gi|354485100|ref|XP_003504722.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cricetulus
griseus]
gi|118763751|gb|AAI28723.1| Lhx9 protein [Rattus norvegicus]
Length = 321
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|125810912|ref|XP_001361667.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|195154388|ref|XP_002018104.1| GL16944 [Drosophila persimilis]
gi|27374288|gb|AAO01041.1| ap-PA [Drosophila pseudoobscura]
gi|54636843|gb|EAL26246.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|194113900|gb|EDW35943.1| GL16944 [Drosophila persimilis]
Length = 469
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 358 GSHMGSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 412
>gi|6754542|ref|NP_034844.1| LIM/homeobox protein Lhx9 isoform b [Mus musculus]
gi|6179608|emb|CAB59907.1| putative LIM-homeodomain alpha isoform [Mus musculus]
gi|148707590|gb|EDL39537.1| LIM homeobox protein 9, isoform CRA_b [Mus musculus]
Length = 321
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
>gi|47217395|emb|CAG00755.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 207 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 254
>gi|6180222|emb|CAB59909.1| putative LIM homeodomain protein [Mus musculus]
Length = 299
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 234 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 281
>gi|344254817|gb|EGW10921.1| LIM/homeobox protein Lhx9 [Cricetulus griseus]
Length = 311
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|149058479|gb|EDM09636.1| LIM homeobox 9, isoform CRA_d [Rattus norvegicus]
Length = 267
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 217 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 264
>gi|124246799|gb|ABE65382.2| putative LIM homeodomain protein [Trachemys scripta]
Length = 235
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 137 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 184
>gi|170048226|ref|XP_001870662.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870356|gb|EDS33739.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 263
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 9/75 (12%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
DL++ L + G G+SS R KRMRTSFKHHQLRTMKSYF IN NPDAKDL
Sbjct: 141 DLNTEYLDLGFSRGLGSSS---------RAKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 191
Query: 66 KQLAQKTGLSKRVLQ 80
KQL+QKTGL KRVLQ
Sbjct: 192 KQLSQKTGLPKRVLQ 206
>gi|149058476|gb|EDM09633.1| LIM homeobox 9, isoform CRA_b [Rattus norvegicus]
Length = 282
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 217 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 264
>gi|195119850|ref|XP_002004442.1| GI19612 [Drosophila mojavensis]
gi|193909510|gb|EDW08377.1| GI19612 [Drosophila mojavensis]
Length = 485
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + + RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 374 GSHMSASSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 428
>gi|195027475|ref|XP_001986608.1| GH20430 [Drosophila grimshawi]
gi|193902608|gb|EDW01475.1| GH20430 [Drosophila grimshawi]
Length = 469
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + + RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 358 GSHMSASSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 412
>gi|46276325|gb|AAS86421.1| lhx9 [Oryzias latipes]
Length = 237
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 181 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 228
>gi|328708276|ref|XP_001946004.2| PREDICTED: protein apterous-like [Acyrthosiphon pisum]
Length = 556
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/49 (89%), Positives = 46/49 (93%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
HQRTKRMRTSFKHHQLRTMKSYF+ N NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 428 HQRTKRMRTSFKHHQLRTMKSYFHHNHNPDAKDLKQLSQKTGLPKRVLQ 476
>gi|195425678|ref|XP_002061119.1| apterous [Drosophila willistoni]
gi|27374312|gb|AAO01060.1| ap-PA [Drosophila willistoni]
gi|194157204|gb|EDW72105.1| apterous [Drosophila willistoni]
Length = 469
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + + RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 359 GSHMSASSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 413
>gi|195402627|ref|XP_002059906.1| apterous [Drosophila virilis]
gi|27374202|gb|AAN87274.1| ap [Drosophila virilis]
gi|194140772|gb|EDW57243.1| apterous [Drosophila virilis]
Length = 472
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + + RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 361 GSHMSASSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 415
>gi|324512462|gb|ADY45163.1| LIM/homeobox protein Lhx9 [Ascaris suum]
Length = 258
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 46/47 (97%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+KRMRTSFKHHQLRTMKSYFN+N NPDAKDLKQLAQ+TGL+KRVLQ
Sbjct: 101 RSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQ 147
>gi|312074868|ref|XP_003140163.1| Lhx2 protein [Loa loa]
gi|307764674|gb|EFO23908.1| Lhx2 protein [Loa loa]
Length = 372
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/47 (87%), Positives = 46/47 (97%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KRMRTSFKHHQLRTMKSYFN+N NPDAKDLKQLAQ+TGL+KRVLQ
Sbjct: 212 KSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQ 258
>gi|45549164|ref|NP_523621.2| apterous, isoform B [Drosophila melanogaster]
gi|281360184|ref|NP_001163059.1| apterous, isoform E [Drosophila melanogaster]
gi|45445417|gb|AAM68357.2| apterous, isoform B [Drosophila melanogaster]
gi|272432346|gb|ACZ94339.1| apterous, isoform E [Drosophila melanogaster]
Length = 246
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 48/55 (87%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 135 GSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 189
>gi|149058480|gb|EDM09637.1| LIM homeobox 9, isoform CRA_e [Rattus norvegicus]
Length = 171
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 121 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 168
>gi|307196005|gb|EFN77730.1| Protein apterous [Harpegnathos saltator]
Length = 319
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 46/50 (92%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+ RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 199 SNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 248
>gi|328925132|dbj|BAK19081.1| apterous A splicing isoform type D [Bombyx mori]
Length = 259
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 47/55 (85%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 137 GGTLGSTSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 191
>gi|322778971|gb|EFZ09382.1| hypothetical protein SINV_12440 [Solenopsis invicta]
Length = 322
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 46/50 (92%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+ RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 202 SNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 251
>gi|149058477|gb|EDM09634.1| LIM homeobox 9, isoform CRA_c [Rattus norvegicus]
Length = 186
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 121 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 168
>gi|345487077|ref|XP_001599660.2| PREDICTED: hypothetical protein LOC100114734 [Nasonia vitripennis]
Length = 644
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 46/50 (92%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+ RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 515 SNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 564
>gi|833753|gb|AAB46366.1| apterous homeodomain protein, partial [Junonia coenia]
Length = 196
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 47/55 (85%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 74 GGXLGSTSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 128
>gi|332018691|gb|EGI59263.1| Protein apterous [Acromyrmex echinatior]
Length = 558
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 46/50 (92%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+ RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 438 SNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 487
>gi|119611693|gb|EAW91287.1| LIM homeobox 9, isoform CRA_a [Homo sapiens]
Length = 155
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 90 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 137
>gi|357622660|gb|EHJ74086.1| apterous a [Danaus plexippus]
Length = 397
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 45/50 (90%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 280 STSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 329
>gi|124377602|dbj|BAF46218.1| LIM homeobox gene 9 gamma protein [Glandirana rugosa]
Length = 331
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDL+QLAQKTGL+KRVLQ
Sbjct: 247 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLRQLAQKTGLTKRVLQ 294
>gi|328925128|dbj|BAK19079.1| apterous A splicing isoform type B [Bombyx mori]
Length = 398
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/55 (81%), Positives = 47/55 (85%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 276 GGTLGSTSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 330
>gi|94732382|emb|CAK04967.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
Length = 147
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 82 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 129
>gi|259013283|ref|NP_001158443.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
gi|197320559|gb|ACH68441.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
Length = 402
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 47/50 (94%)
Query: 30 HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
++ QRTKRMRTSFKHHQLRTMKSYF +N NPDAKDLKQLAQKTGL+KRVL
Sbjct: 253 YTQQRTKRMRTSFKHHQLRTMKSYFALNHNPDAKDLKQLAQKTGLTKRVL 302
>gi|242023959|ref|XP_002432398.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212517821|gb|EEB19660.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 305
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
G G ++PGS + S R+KRMRTSFKHHQLRTMKSYF+IN NPDAKDLKQL+QKT L KRV
Sbjct: 175 GRGPNTPGS-LSSSGRSKRMRTSFKHHQLRTMKSYFSINHNPDAKDLKQLSQKTSLPKRV 233
Query: 79 LQ 80
LQ
Sbjct: 234 LQ 235
>gi|345132129|gb|AEN75257.1| apterous [Neanthes arenaceodentata]
Length = 420
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/56 (78%), Positives = 46/56 (82%)
Query: 25 PGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
PG R KR+RTSFKHHQLRTMKSYF +N NPDAKDLKQLAQKTGLSKRVLQ
Sbjct: 272 PGPPTGQPPRQKRVRTSFKHHQLRTMKSYFALNHNPDAKDLKQLAQKTGLSKRVLQ 327
>gi|328925118|dbj|BAK19074.1| Bmptp-Z and Bmap-A fusion protein alpha [Bombyx mori]
Length = 466
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/55 (81%), Positives = 47/55 (85%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 344 GGTLGSTSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 398
>gi|307166315|gb|EFN60497.1| Protein apterous [Camponotus floridanus]
Length = 506
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 46/50 (92%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+ RTKRMRTSFKHHQLRTMKSYF +N NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 386 SNSRTKRMRTSFKHHQLRTMKSYFALNHNPDAKDLKQLSQKTGLPKRVLQ 435
>gi|224493113|sp|A2I8Z7.1|LHX9_ASTFA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|121531644|gb|ABM55505.1| LIM/homeobox protein 9 [Astyanax mexicanus]
Length = 377
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TK MRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKXMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|224493175|sp|Q90881.2|LHX9_CHICK RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRM TSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 265 QKTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
>gi|224493106|sp|A2PZF9.1|LHX9_RANRU RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|124377598|dbj|BAF46216.1| LIM homeobox gene 9 alpha protein [Glandirana rugosa]
Length = 379
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRT KSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 247 QKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 294
>gi|45382197|ref|NP_990757.1| LIM/homeobox protein Lhx9 [Gallus gallus]
gi|556038|gb|AAA50258.1| homeobox protein [Gallus gallus]
Length = 378
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRM TSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 246 QKTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 293
>gi|124377604|dbj|BAF46219.1| LIM homeobox gene 9 delta protein [Glandirana rugosa]
Length = 312
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRT KSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 247 QKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 294
>gi|124377600|dbj|BAF46217.1| LIM homeobox gene 9 beta protein [Glandirana rugosa]
Length = 347
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRT KSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 247 QKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 294
>gi|115727487|ref|XP_782032.2| PREDICTED: LIM/homeobox protein Lhx9 [Strongylocentrotus
purpuratus]
Length = 474
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLRTMKSYF +N NPDAKDLKQLA KTGL+KRVLQ
Sbjct: 281 RTKRMRTSFKHHQLRTMKSYFAMNHNPDAKDLKQLAHKTGLTKRVLQ 327
>gi|443696308|gb|ELT97041.1| hypothetical protein CAPTEDRAFT_43751, partial [Capitella teleta]
Length = 271
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 22 NSSPGSG--VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
N PG G + R KRMRTSFKHHQLR MKSYF +N NPDAKDLKQLAQKTGLSKRVL
Sbjct: 190 NDLPGLGNDMSMQARQKRMRTSFKHHQLRIMKSYFQLNHNPDAKDLKQLAQKTGLSKRVL 249
Query: 80 Q 80
Q
Sbjct: 250 Q 250
>gi|58372658|gb|AAW71489.1| apterous [Heliconius doris]
Length = 65
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/47 (91%), Positives = 44/47 (93%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 18 RTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 64
>gi|405961382|gb|EKC27193.1| LIM/homeobox protein Lhx9 [Crassostrea gigas]
Length = 415
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 46/55 (83%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G R KR+RTSFKHHQLRTMKSYF +N NPDAKDLKQLAQKTGLSKRVLQ
Sbjct: 254 GYGSQPPPRQKRVRTSFKHHQLRTMKSYFALNHNPDAKDLKQLAQKTGLSKRVLQ 308
>gi|358339076|dbj|GAA47203.1| LIM/homeobox protein Lhx2 [Clonorchis sinensis]
Length = 761
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
++++ N+ PG + R KRMRTSFKHHQLR MK+YFN+N NPD KDLK L +KTGL
Sbjct: 522 TFDNVCLNNPPGYCIGMSTRQKRMRTSFKHHQLRAMKAYFNMNHNPDVKDLKVLTEKTGL 581
Query: 75 SKRVLQ 80
SKRVLQ
Sbjct: 582 SKRVLQ 587
>gi|268580707|ref|XP_002645336.1| C. briggsae CBR-TTX-3 protein [Caenorhabditis briggsae]
Length = 461
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 52/73 (71%), Gaps = 8/73 (10%)
Query: 8 SSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
+S E+ + E G+ N HQR KRMRTSFKHHQLR MKSYF +N NPDAKDLKQ
Sbjct: 326 TSEAEASTDEDGSSNG--------HQRNKRMRTSFKHHQLRAMKSYFALNHNPDAKDLKQ 377
Query: 68 LAQKTGLSKRVLQ 80
LA KT L+KRVLQ
Sbjct: 378 LAVKTNLTKRVLQ 390
>gi|58372640|gb|AAW71480.1| apterous [Heliconius demeter]
gi|58372642|gb|AAW71481.1| apterous [Heliconius burneyi]
gi|58372644|gb|AAW71482.1| apterous [Heliconius hecuba]
gi|58372646|gb|AAW71483.1| apterous [Heliconius aoede]
gi|58372648|gb|AAW71484.1| apterous [Heliconius melpomene]
gi|58372650|gb|AAW71485.1| apterous [Heliconius numata numata]
gi|58372656|gb|AAW71488.1| apterous [Heliconius eleuchia]
Length = 65
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/47 (91%), Positives = 44/47 (93%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 18 RTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 64
>gi|58372660|gb|AAW71490.1| apterous [Eueides vibilia]
gi|58372662|gb|AAW71491.1| apterous [Dryas iulia]
Length = 65
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/47 (91%), Positives = 44/47 (93%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 18 RTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 64
>gi|23893425|emb|CAD12363.1| apterous-1 [Cupiennius salei]
Length = 253
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 43/47 (91%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KRMRTSFKHHQLR MKSYF IN NPDAKDLKQL+QKTGLSKRVLQ
Sbjct: 205 RPKRMRTSFKHHQLRAMKSYFAINHNPDAKDLKQLSQKTGLSKRVLQ 251
>gi|159164230|pdb|2DMQ|A Chain A, Solution Structure Of The Homeobox Domain Of LimHOMEOBOX
Protein Lhx9
Length = 80
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 43/45 (95%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 8 KRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 52
>gi|170578520|ref|XP_001894442.1| homeobox domain containing protein [Brugia malayi]
gi|158598966|gb|EDP36714.1| homeobox domain containing protein [Brugia malayi]
Length = 248
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/48 (85%), Positives = 46/48 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KRMRTSFKHHQLRTMKSYFN+N NPDAKDLKQLAQ+TGL+KRVLQ
Sbjct: 144 HKSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQ 191
>gi|4809142|gb|AAD30110.1|AF134761_1 LIM-homeodomain type transcription factor Lhx9 [Mus musculus]
Length = 300
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KR
Sbjct: 256 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 300
>gi|339238047|ref|XP_003380578.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
gi|316976506|gb|EFV59791.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
Length = 337
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
S D S+E S E+ +SS G + R KRMRTSFK QLRTMK+YF +N NPDAK
Sbjct: 180 SADSDCSVEKSSEENSRCHSSSGMQI---MRPKRMRTSFKQQQLRTMKAYFQMNHNPDAK 236
Query: 64 DLKQLAQKTGLSKRVLQ 80
DLKQLAQKTGL+KR+LQ
Sbjct: 237 DLKQLAQKTGLTKRILQ 253
>gi|365784328|dbj|BAL42853.1| apterous-like protein, partial [Megoura crassicauda]
Length = 133
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
HQRTKRMRTSFKHHQLRTM SYF+ N NPDAKDLKQL+QKTGL KRVL
Sbjct: 86 HQRTKRMRTSFKHHQLRTMXSYFHHNHNPDAKDLKQLSQKTGLPKRVL 133
>gi|58372654|gb|AAW71487.1| apterous [Heliconius clysonymus]
Length = 65
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 43/47 (91%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLR MKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 18 RTKRMRTSFKHHQLRXMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 64
>gi|392927445|ref|NP_001257168.1| Protein TTX-3, isoform a [Caenorhabditis elegans]
gi|2795770|gb|AAB97099.1| putative transcription factor TTX-3 [Caenorhabditis elegans]
gi|13548319|emb|CAB03956.3| Protein TTX-3, isoform a [Caenorhabditis elegans]
Length = 409
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
S E+ A G+G S QR+KRMRTSFKHHQLR MK+YF +N NPDAKDLKQLA KT L
Sbjct: 273 STEAEASTDEDGNGSGS-QRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNL 331
Query: 75 SKRVLQ 80
+KRVLQ
Sbjct: 332 TKRVLQ 337
>gi|124377606|dbj|BAF46220.1| LIM homeobox gene 9 epsilon protein [Glandirana rugosa]
Length = 297
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 44/48 (91%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKRMRTSFKHHQLRT KSYF IN NPDAKDLKQLAQKT L+KRVLQ
Sbjct: 247 QKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTRLTKRVLQ 294
>gi|58372652|gb|AAW71486.1| apterous [Heliconius erato hydara]
Length = 65
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 43/47 (91%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKRMRTSFKHHQLR MKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 18 RTKRMRTSFKHHQLRXMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 64
>gi|339262974|ref|XP_003367138.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
gi|316963223|gb|EFV48961.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
Length = 180
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
D S+E S E+ +SS G + R KRMRTSFK QLRTMK+YF +N NPDAKD
Sbjct: 24 ADSDCSVEKSSEENSRCHSSSGMQI---MRPKRMRTSFKQQQLRTMKAYFQMNHNPDAKD 80
Query: 65 LKQLAQKTGLSKRVLQ 80
LKQLAQKTGL+KR+LQ
Sbjct: 81 LKQLAQKTGLTKRILQ 96
>gi|392927447|ref|NP_001257169.1| Protein TTX-3, isoform b [Caenorhabditis elegans]
gi|211970482|emb|CAR97817.1| Protein TTX-3, isoform b [Caenorhabditis elegans]
Length = 381
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
S E+ A G+G S QR+KRMRTSFKHHQLR MK+YF +N NPDAKDLKQLA KT L
Sbjct: 245 STEAEASTDEDGNGSGS-QRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNL 303
Query: 75 SKRVLQ 80
+KRVLQ
Sbjct: 304 TKRVLQ 309
>gi|256085689|ref|XP_002579046.1| lim homeobox protein [Schistosoma mansoni]
Length = 375
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 48/65 (73%)
Query: 16 YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
+E+ NS + R KRMRTSFKHHQLRTMK+YFNIN NPD KDLK L +KTGLS
Sbjct: 242 FENDCFNSGTNFYLGITTRQKRMRTSFKHHQLRTMKAYFNINHNPDVKDLKVLTEKTGLS 301
Query: 76 KRVLQ 80
KRVLQ
Sbjct: 302 KRVLQ 306
>gi|308464503|ref|XP_003094518.1| CRE-TTX-3 protein [Caenorhabditis remanei]
gi|308247319|gb|EFO91271.1| CRE-TTX-3 protein [Caenorhabditis remanei]
Length = 460
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 45/50 (90%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S+QR+KRMRTSFKHHQLR MK+YF +N NPDAKDLKQLA KT L+KRVLQ
Sbjct: 344 SNQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQ 393
>gi|260794979|ref|XP_002592484.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277704|gb|EEN48495.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 330
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 45/47 (95%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RTSFKHHQLRT+KSYF IN NPD+KDL+QLAQKTGL+KRVLQ
Sbjct: 200 KTKRIRTSFKHHQLRTLKSYFAINHNPDSKDLQQLAQKTGLTKRVLQ 246
>gi|227430299|ref|NP_001153058.1| LIM homeobox 2a [Danio rerio]
gi|226434001|gb|ACO56117.1| LIM homeodomain protein 2a [Danio rerio]
Length = 320
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 46/50 (92%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q++KRMRTSFKHHQLRTM+S+F N NPDAKDLK+LAQKTGL+KRVLQ
Sbjct: 195 SCQKSKRMRTSFKHHQLRTMQSFFTHNHNPDAKDLKELAQKTGLTKRVLQ 244
>gi|341885594|gb|EGT41529.1| CBN-TTX-3 protein [Caenorhabditis brenneri]
Length = 388
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
S E+ A GS +QR+KRMRTSFKHHQLR MK+YF +N NPDAKDLKQLA KT L
Sbjct: 253 STEAEASTDEDGS-TSGNQRSKRMRTSFKHHQLRAMKNYFALNHNPDAKDLKQLAAKTNL 311
Query: 75 SKRVLQ 80
+KRVLQ
Sbjct: 312 TKRVLQ 317
>gi|156390719|ref|XP_001635417.1| predicted protein [Nematostella vectensis]
gi|156222511|gb|EDO43354.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 7 LSSSMESLSYESGAGNSSPGS-GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
+++++ES++ + PG + R KR+RTSFKHHQLR MK+YF +N NPDAKDL
Sbjct: 152 IATAIESITNLGYDLSDRPGELTTGADGRPKRVRTSFKHHQLRAMKTYFAMNHNPDAKDL 211
Query: 66 KQLAQKTGLSKRVLQ 80
KQL+QKTGL+KRVLQ
Sbjct: 212 KQLSQKTGLTKRVLQ 226
>gi|198437781|ref|XP_002124033.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 402
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KRMRTSFKHHQLR MK+YF+ N NPDAKDLKQLAQ+TGL+KRVLQ
Sbjct: 216 KSKRMRTSFKHHQLRAMKAYFHQNHNPDAKDLKQLAQETGLTKRVLQ 262
>gi|56185681|gb|AAV84105.1| apterous [Euprymna scolopes]
Length = 423
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 42/47 (89%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KRMRTSFKHHQLRT+KSYF +N NP AKDLK LAQKTGL+KRVLQ
Sbjct: 283 RQKRMRTSFKHHQLRTLKSYFAVNHNPGAKDLKHLAQKTGLTKRVLQ 329
>gi|13509267|emb|CAC35214.1| Lhx9 protein [Xenopus laevis]
Length = 217
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 43/46 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
Q++KRMRTSFKH+QLRTMKSYF IN NPDAK LKQLAQKTGL+KRV
Sbjct: 172 QKSKRMRTSFKHNQLRTMKSYFAINHNPDAKGLKQLAQKTGLTKRV 217
>gi|321454677|gb|EFX65838.1| hypothetical protein DAPPUDRAFT_13685 [Daphnia pulex]
Length = 266
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RTSFKHHQLR +KSYF N NPDAKDLKQL+QKT LSKRVLQ
Sbjct: 191 KTKRLRTSFKHHQLRMLKSYFATNHNPDAKDLKQLSQKTTLSKRVLQ 237
>gi|110339157|gb|ABG67842.1| LHX29, partial [Nematostella vectensis]
Length = 60
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR+RTSFKHHQLR MK+YF +N NPDAKDLKQL+QKTGL+KRVLQ
Sbjct: 2 KRVRTSFKHHQLRAMKTYFAMNHNPDAKDLKQLSQKTGLTKRVLQ 46
>gi|443696309|gb|ELT97042.1| hypothetical protein CAPTEDRAFT_167444 [Capitella teleta]
Length = 444
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 48/57 (84%), Gaps = 3/57 (5%)
Query: 27 SGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG+H + + KRMRTSFKH+QLRTM++YF++N NPDAKDLK L+ KTGLSK+VLQ
Sbjct: 294 SGIHGNYGATKHKRMRTSFKHNQLRTMRTYFSLNHNPDAKDLKDLSSKTGLSKKVLQ 350
>gi|353228649|emb|CCD74820.1| hypothetical protein Smp_003280 [Schistosoma mansoni]
Length = 1008
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 41/47 (87%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RTSFKH QLR MKSYF + NPD+KDLKQL+QKTGLSKRVLQ
Sbjct: 821 KIKRIRTSFKHQQLRIMKSYFEFSHNPDSKDLKQLSQKTGLSKRVLQ 867
>gi|196000228|ref|XP_002109982.1| hypothetical protein TRIADDRAFT_14836 [Trichoplax adhaerens]
gi|190588106|gb|EDV28148.1| hypothetical protein TRIADDRAFT_14836, partial [Trichoplax
adhaerens]
Length = 215
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H R+KR+RTSFK QLRTMK+YF +N NPD+KDLKQL+ KTGL+KRVLQ
Sbjct: 153 HGRSKRIRTSFKQPQLRTMKTYFALNHNPDSKDLKQLSIKTGLNKRVLQ 201
>gi|241753304|ref|XP_002401116.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215508341|gb|EEC17795.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 95
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 38 MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
MRTSFKH QLR MK+YF +N NPD+KDLKQL+ +TGLSKRVLQ
Sbjct: 1 MRTSFKHSQLRAMKAYFTVNHNPDSKDLKQLSARTGLSKRVLQ 43
>gi|197282000|gb|ACH57179.1| Lim2/9 [Trichoplax adhaerens]
Length = 60
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+KR+RTSFK QLRTMK+YF +N NPD+KDLKQL+ KTGL+KRVLQ
Sbjct: 1 SKRIRTSFKQPQLRTMKTYFALNHNPDSKDLKQLSIKTGLNKRVLQ 46
>gi|358335415|dbj|GAA53940.1| LIM homeobox protein 2/9 [Clonorchis sinensis]
Length = 506
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+++KR+RTSFKH Q+ TMK +F+ NQNPD+KDLK+L+ TGLSKRVLQ
Sbjct: 279 EKSKRIRTSFKHDQIHTMKLFFDKNQNPDSKDLKELSIATGLSKRVLQ 326
>gi|353228733|emb|CCD74904.1| putative lim homeobox protein [Schistosoma mansoni]
Length = 628
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 38/54 (70%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG+H KHHQLRTMK+YFNIN NPD KDLK L +KTGLSKRVLQ
Sbjct: 506 SGIHQVFDKNVCVHLLKHHQLRTMKAYFNINHNPDVKDLKVLTEKTGLSKRVLQ 559
>gi|284424954|dbj|BAI67123.1| homepbox protein [Taeniopygia guttata]
Length = 156
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 33/36 (91%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQL 68
Q+TKRMRTSFKHHQLRTMKSYF IN NPDAKD KQL
Sbjct: 121 QKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDFKQL 156
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 2 LHSGDL---SSSMESLSYESGAGNSS---------PGSGVHSHQRTKRMRTSFKHHQLRT 49
LH G + S +E++ +G+GN S GSG H R KR+RT+F QLR
Sbjct: 155 LHDGKVLCKSHYLEAMDAAAGSGNGSDCDSLYSGESGSGGH---RPKRVRTTFTEEQLRV 211
Query: 50 MKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+++ FNI+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 212 LQANFNIDSNPDGQDLERIAQITGLSKRVTQ 242
>gi|121531642|gb|ABM55504.1| LIM/homeobox protein 2 [Astyanax mexicanus]
Length = 130
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/34 (91%), Positives = 32/34 (94%)
Query: 47 LRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
LRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 1 LRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 34
>gi|348543221|ref|XP_003459082.1| PREDICTED: LIM/homeobox protein Lhx9-like [Oreochromis niloticus]
Length = 509
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 9 SSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQL 68
SS E S + AG P +RTKR+RT F+ QLR ++SYF NPD KD L
Sbjct: 319 SSPEPRSDDRAAGGRIP-------RRTKRIRTCFRSEQLRALESYFAQKHNPDGKDWTCL 371
Query: 69 AQKTGLSKRVLQ 80
A KTGL KRVLQ
Sbjct: 372 AHKTGLPKRVLQ 383
>gi|390356846|ref|XP_785118.3| PREDICTED: LIM/homeobox protein Awh-like [Strongylocentrotus
purpuratus]
Length = 335
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+TKR+RT+F QL +++ FN++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 183 QQKTKRIRTTFTEEQLEVLQANFNVDSNPDGQDLERIAQITGLSKRVTQ 231
>gi|156364672|ref|XP_001626470.1| predicted protein [Nematostella vectensis]
gi|156213347|gb|EDO34370.1| predicted protein [Nematostella vectensis]
Length = 304
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ SP S + KR+RT+F QL+ +++ FNI+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 166 GDDSPNSLKSGRHKAKRVRTTFTEDQLQILQANFNIDSNPDGQDLERIAQLTGLSKRVTQ 225
>gi|339236177|ref|XP_003379643.1| LIM/homeobox protein Awh [Trichinella spiralis]
gi|316977684|gb|EFV60755.1| LIM/homeobox protein Awh [Trichinella spiralis]
Length = 902
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 29 VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
VH Q+TKR+RT+F QL+ +++ F I+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 749 VHHKQKTKRVRTTFTEEQLQILQANFQIDSNPDGQDLERIAQGTGLSKRVTQ 800
>gi|67003890|gb|AAY60840.1| LIM/homeobox protein 29, partial [Lampetra fluviatilis]
Length = 36
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 47 LRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
LRTMKSYF +N +PDAKDLKQLAQKTGL+KRVLQ
Sbjct: 1 LRTMKSYFALNHDPDAKDLKQLAQKTGLTKRVLQ 34
>gi|291240697|ref|XP_002740254.1| PREDICTED: LIM class homeodomain transcription factor, Lhx6/8
subclass-like [Saccoglossus kowalevskii]
Length = 283
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RTKR+RT+F QL+ +++ FN++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 165 RTKRVRTTFTEEQLQVLQANFNVDSNPDGQDLERIAQITGLSKRVTQ 211
>gi|299115104|dbj|BAJ09783.1| apterous 2 [Daphnia magna]
Length = 318
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
+TKR+RTSFKHHQLR +KSYF N NPDAKDLKQ
Sbjct: 276 KTKRLRTSFKHHQLRMLKSYFATNHNPDAKDLKQ 309
>gi|17568917|ref|NP_508669.1| Protein LIM-4 [Caenorhabditis elegans]
gi|1621631|gb|AAB17273.1| putative transcription factor LIM-4 [Caenorhabditis elegans]
gi|351063300|emb|CCD71434.1| Protein LIM-4 [Caenorhabditis elegans]
Length = 355
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 27 SGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SGV S + +TKR+RT+F QL +++YFN + NPD DL+++A TGLSKRV Q
Sbjct: 230 SGVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQ 284
>gi|391339813|ref|XP_003744241.1| PREDICTED: sodium-coupled monocarboxylate transporter 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL+ +++ FN++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 594 KTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERIAQITGLSKRVTQ 640
>gi|268578911|ref|XP_002644438.1| C. briggsae CBR-LIM-4 protein [Caenorhabditis briggsae]
Length = 346
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 27 SGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SGV S + +TKR+RT+F QL +++YFN + NPD DL+++A TGLSKRV Q
Sbjct: 222 SGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIANMTGLSKRVTQ 276
>gi|158296021|ref|XP_316578.4| AGAP006540-PA [Anopheles gambiae str. PEST]
gi|157016312|gb|EAA11207.4| AGAP006540-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ G + +TKR+RT+F QL+ +++ FNI+ NPD +DL+++A TGLSKRV Q
Sbjct: 150 DGCEADGYQKNNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVTQ 208
>gi|56694828|gb|AAW23076.1| Lhx2/9, partial [Oikopleura dioica]
Length = 229
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR+RTSFK++Q+ MK F + NPDA DLK LA +TGL+KRVLQ
Sbjct: 157 KRIRTSFKNYQINAMKRAFQMKPNPDASDLKTLAVETGLTKRVLQ 201
>gi|312371799|gb|EFR19895.1| hypothetical protein AND_21633 [Anopheles darlingi]
Length = 284
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 12 ESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E + + + G + +TKR+RT+F QL+ +++ FNI+ NPD +DL+++A
Sbjct: 107 EMFDCGTSSDDGCEADGYQKNSKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASV 166
Query: 72 TGLSKRVLQ 80
TGLSKRV Q
Sbjct: 167 TGLSKRVTQ 175
>gi|313239000|emb|CBY13986.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR+RTSFK++Q+ MK F + NPDA DLK LA +TGL+KRVLQ
Sbjct: 127 KRIRTSFKNYQINAMKRAFQMKPNPDASDLKTLAVETGLTKRVLQ 171
>gi|157134682|ref|XP_001663345.1| arrowhead [Aedes aegypti]
gi|108870378|gb|EAT34603.1| AAEL013168-PA, partial [Aedes aegypti]
Length = 306
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 12 ESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E + + + G +TKR+RT+F QL+ +++ FNI+ NPD +DL+++A
Sbjct: 125 EMFDCGTSSDDGCEADGFQKSNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASV 184
Query: 72 TGLSKRVLQ 80
TGLSKRV Q
Sbjct: 185 TGLSKRVTQ 193
>gi|308512521|ref|XP_003118443.1| CRE-LIM-4 protein [Caenorhabditis remanei]
gi|308239089|gb|EFO83041.1| CRE-LIM-4 protein [Caenorhabditis remanei]
Length = 355
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 27 SGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SGV S + +TKR+RT+F QL +++YFN + NPD DL+++A TGLSKRV Q
Sbjct: 230 SGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQ 284
>gi|258504172|gb|ACV72780.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 27 SGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SGV S + +TKR+RT+F QL +++YFN + NPD DL+++A TGLSKRV Q
Sbjct: 200 SGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQ 254
>gi|258504166|gb|ACV72777.1| LIM-4 [Caenorhabditis remanei]
gi|258504168|gb|ACV72778.1| LIM-4 [Caenorhabditis remanei]
gi|258504170|gb|ACV72779.1| LIM-4 [Caenorhabditis remanei]
gi|258504174|gb|ACV72781.1| LIM-4 [Caenorhabditis remanei]
gi|258504176|gb|ACV72782.1| LIM-4 [Caenorhabditis remanei]
gi|258504178|gb|ACV72783.1| LIM-4 [Caenorhabditis remanei]
gi|258504180|gb|ACV72784.1| LIM-4 [Caenorhabditis remanei]
gi|258504182|gb|ACV72785.1| LIM-4 [Caenorhabditis remanei]
gi|258504188|gb|ACV72788.1| LIM-4 [Caenorhabditis remanei]
gi|258504190|gb|ACV72789.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 27 SGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SGV S + +TKR+RT+F QL +++YFN + NPD DL+++A TGLSKRV Q
Sbjct: 200 SGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQ 254
>gi|258504160|gb|ACV72774.1| LIM-4 [Caenorhabditis remanei]
gi|258504162|gb|ACV72775.1| LIM-4 [Caenorhabditis remanei]
gi|258504164|gb|ACV72776.1| LIM-4 [Caenorhabditis remanei]
gi|258504184|gb|ACV72786.1| LIM-4 [Caenorhabditis remanei]
gi|258504186|gb|ACV72787.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 27 SGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SGV S + +TKR+RT+F QL +++YFN + NPD DL+++A TGLSKRV Q
Sbjct: 200 SGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQ 254
>gi|319740961|gb|ADV69000.1| lim-homeobox 2/9 [Patiria miniata]
Length = 304
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 62
QRTKRMRTSFKHHQLRTMK+YF++N NPD
Sbjct: 275 QRTKRMRTSFKHHQLRTMKTYFSLNHNPDV 304
>gi|158296015|ref|XP_316574.4| AGAP006536-PA [Anopheles gambiae str. PEST]
gi|157016309|gb|EAA11386.5| AGAP006536-PA [Anopheles gambiae str. PEST]
Length = 291
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 10 SMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
++E S S G SS G ++ ++KR+RT+F QL+ +++ F I+ NPD +DL+++A
Sbjct: 154 TVEDGSNSSDDGCSSDG---YNKNKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIA 210
Query: 70 QKTGLSKRVLQ 80
Q TGLSKRV Q
Sbjct: 211 QLTGLSKRVTQ 221
>gi|241716001|ref|XP_002412129.1| arrowhead, putative [Ixodes scapularis]
gi|215505217|gb|EEC14711.1| arrowhead, putative [Ixodes scapularis]
Length = 114
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL+ +++ FN++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 31 KTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERIAQITGLSKRVTQ 77
>gi|170034020|ref|XP_001844873.1| arrowhead [Culex quinquefasciatus]
gi|167875281|gb|EDS38664.1| arrowhead [Culex quinquefasciatus]
Length = 304
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++KR+RT+F QL+ +++ FNI+ NPD +DL+++A TGLSKRV Q
Sbjct: 141 ADGLQKSNKSKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVTQ 195
>gi|194749355|ref|XP_001957104.1| GF24228 [Drosophila ananassae]
gi|190624386|gb|EDV39910.1| GF24228 [Drosophila ananassae]
Length = 275
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 136 DGCDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|195587560|ref|XP_002083529.1| GD13784 [Drosophila simulans]
gi|194195538|gb|EDX09114.1| GD13784 [Drosophila simulans]
Length = 278
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 143 GDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 196
>gi|195441498|ref|XP_002068546.1| GK20529 [Drosophila willistoni]
gi|194164631|gb|EDW79532.1| GK20529 [Drosophila willistoni]
Length = 275
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 136 DGCDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|442630038|ref|NP_001261380.1| arrowhead, isoform D [Drosophila melanogaster]
gi|440215264|gb|AGB94075.1| arrowhead, isoform D [Drosophila melanogaster]
Length = 271
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 140 GDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|24656997|ref|NP_523907.2| arrowhead, isoform A [Drosophila melanogaster]
gi|23092945|gb|AAF47800.2| arrowhead, isoform A [Drosophila melanogaster]
Length = 214
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 24 SPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 138 CDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|24656992|ref|NP_728906.1| arrowhead, isoform B [Drosophila melanogaster]
gi|194866170|ref|XP_001971791.1| GG15164 [Drosophila erecta]
gi|195491511|ref|XP_002093592.1| GE21383 [Drosophila yakuba]
gi|62510367|sp|Q8IRC7.1|AWH_DROME RecName: Full=LIM/homeobox protein Awh; AltName: Full=Protein
arrowhead
gi|23092944|gb|AAN11572.1| arrowhead, isoform B [Drosophila melanogaster]
gi|94400621|gb|ABF17921.1| FI01007p [Drosophila melanogaster]
gi|190653574|gb|EDV50817.1| GG15164 [Drosophila erecta]
gi|194179693|gb|EDW93304.1| GE21383 [Drosophila yakuba]
Length = 275
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 140 GDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|195337236|ref|XP_002035235.1| GM14592 [Drosophila sechellia]
gi|194128328|gb|EDW50371.1| GM14592 [Drosophila sechellia]
Length = 275
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 140 GDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|195161060|ref|XP_002021388.1| GL25299 [Drosophila persimilis]
gi|198465223|ref|XP_001353549.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
gi|194118501|gb|EDW40544.1| GL25299 [Drosophila persimilis]
gi|198150064|gb|EAL31062.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
Length = 275
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 140 GDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|442630036|ref|NP_001261379.1| arrowhead, isoform C [Drosophila melanogaster]
gi|440215263|gb|AGB94074.1| arrowhead, isoform C [Drosophila melanogaster]
Length = 287
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 140 GDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 193
>gi|195016322|ref|XP_001984389.1| GH16430 [Drosophila grimshawi]
gi|193897871|gb|EDV96737.1| GH16430 [Drosophila grimshawi]
Length = 239
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 100 DGCDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 157
>gi|405973461|gb|EKC38176.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 278
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G SS S + KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 166 GGSSKDSECSQKSKAKRVRTTFTEDQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 225
>gi|195125467|ref|XP_002007199.1| GI12512 [Drosophila mojavensis]
gi|193918808|gb|EDW17675.1| GI12512 [Drosophila mojavensis]
Length = 239
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 100 DGCDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 157
>gi|443703132|gb|ELU00843.1| hypothetical protein CAPTEDRAFT_221751 [Capitella teleta]
Length = 241
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 25 PGSGVHSHQR--TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
PGS +S+Q+ TKR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 111 PGSDENSNQKQKTKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 168
>gi|195375542|ref|XP_002046559.1| GJ12418 [Drosophila virilis]
gi|194153717|gb|EDW68901.1| GJ12418 [Drosophila virilis]
Length = 239
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 100 DGCDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQ 157
>gi|357605400|gb|EHJ64588.1| hypothetical protein KGM_21596 [Danaus plexippus]
Length = 406
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
G N G H + KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLSKRV
Sbjct: 266 GKCNGCDSEGYHK-SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQVTGLSKRV 324
Query: 79 LQ 80
Q
Sbjct: 325 TQ 326
>gi|17945534|gb|AAL48819.1| RE24382p [Drosophila melanogaster]
Length = 275
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV Q
Sbjct: 140 GDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDDQDLERIASVTGLSKRVTQ 193
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 30 HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
HS + KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 197 HSKNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 247
>gi|157137277|ref|XP_001663968.1| arrowhead [Aedes aegypti]
gi|108869746|gb|EAT33971.1| AAEL013763-PA, partial [Aedes aegypti]
Length = 211
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 17 ESGAGNSSPGSGV--HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
+ G +S G +S +TKR+RT+F Q++ +++ F I+ NPD +DL+++A TGL
Sbjct: 133 DDGTTSSEDGCDAEGNSKNKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLERIALATGL 192
Query: 75 SKRVLQ 80
SKRV Q
Sbjct: 193 SKRVTQ 198
>gi|324511084|gb|ADY44626.1| LIM/homeobox protein Awh [Ascaris suum]
Length = 384
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL ++++F I+ NPD DL+++A TGLSKRV Q
Sbjct: 248 KTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQ 294
>gi|170577993|ref|XP_001894217.1| Homeobox domain containing protein [Brugia malayi]
gi|158599257|gb|EDP36927.1| Homeobox domain containing protein [Brugia malayi]
Length = 452
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL ++++F I+ NPD DL+++A TGLSKRV Q
Sbjct: 330 KTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQ 376
>gi|312385468|gb|EFR29960.1| hypothetical protein AND_00755 [Anopheles darlingi]
Length = 339
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 13 SLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKT 72
+ S E G G G +TKR+RT+F Q++ +++ F I+ NPD +DL+++A T
Sbjct: 197 TTSSEDGCDADGSGKG----SKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLERIALAT 252
Query: 73 GLSKRVLQ 80
GLSKRV Q
Sbjct: 253 GLSKRVTQ 260
>gi|2435404|gb|AAB71337.1| arrowhead [Drosophila melanogaster]
Length = 214
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 24 SPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G H +TKR+RT+F QL+ +++ F I+ NPD +DL+++A TGLSKRV +
Sbjct: 138 CDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTE 193
>gi|82621617|gb|ABB86480.1| LHX6/8-LIM class homeobox protein, partial [Nematostella
vectensis]
gi|110339153|gb|ABG67840.1| LHX67, partial [Nematostella vectensis]
Length = 60
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR+RT+F QL+ +++ FNI+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 2 KRVRTTFTEDQLQILQANFNIDSNPDGQDLERIAQLTGLSKRVTQ 46
>gi|312075111|ref|XP_003140272.1| hypothetical protein LOAG_04687 [Loa loa]
Length = 136
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL ++++F I+ NPD DL+++A TGLSKRV Q
Sbjct: 14 KTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQ 60
>gi|312385469|gb|EFR29961.1| hypothetical protein AND_00756 [Anopheles darlingi]
Length = 344
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 30 HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ ++KR+RT+F QL+ +++ F I+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 192 YNKNKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIAQLTGLSKRVTQ 242
>gi|307182932|gb|EFN69942.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 458
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL +++ F ++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 324 KTKRVRTTFTEEQLAVLQANFQMDSNPDGQDLERIAQVTGLSKRVTQ 370
>gi|307195463|gb|EFN77349.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 142
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL +++ F ++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 7 KTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQ 53
>gi|34733877|gb|AAQ81871.1| LIM homeobox gene protein 9 [Ambystoma mexicanum]
Length = 120
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 26/28 (92%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNP 60
Q+TKRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 93 QKTKRMRTSFKHHQLRTMKSYFAINHNP 120
>gi|393905176|gb|EFO23802.2| hypothetical protein LOAG_04687 [Loa loa]
Length = 205
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL ++++F I+ NPD DL+++A TGLSKRV Q
Sbjct: 83 KTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQ 129
>gi|379698940|ref|NP_001243941.1| arrowhead PA [Bombyx mori]
gi|346223348|dbj|BAK78925.1| arrowhead PA [Bombyx mori]
Length = 274
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 147 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQ 193
>gi|170034028|ref|XP_001844877.1| arrowhead [Culex quinquefasciatus]
gi|167875285|gb|EDS38668.1| arrowhead [Culex quinquefasciatus]
Length = 213
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KR+RT+F QL +++ F I+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 103 KSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQ 149
>gi|431897001|gb|ELK06265.1| LIM/homeobox protein Lhx8 [Pteropus alecto]
Length = 306
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 223 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 283 TGLSRRVIQ 291
>gi|270004863|gb|EFA01311.1| arrowhead [Tribolium castaneum]
Length = 349
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 11 MESLSYESGAGNSSPGSGVHSH--QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQL 68
+E+L + G +S G + + KR+RT+F QL+ +++ F ++ NPD +DL+++
Sbjct: 185 LETL--DGGTTSSDDGCDAEGYHKNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 242
Query: 69 AQKTGLSKRVLQ 80
AQ TGLSKRV Q
Sbjct: 243 AQITGLSKRVTQ 254
>gi|170034026|ref|XP_001844876.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
gi|167875284|gb|EDS38667.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
Length = 198
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KR+RT+F QL +++ F I+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 86 KSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQ 132
>gi|157128769|ref|XP_001661512.1| arrowhead [Aedes aegypti]
gi|108872464|gb|EAT36689.1| AAEL011247-PA [Aedes aegypti]
Length = 271
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KR+RT+F QL +++ F I+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 160 KSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQ 206
>gi|170034024|ref|XP_001844875.1| arrowhead [Culex quinquefasciatus]
gi|167875283|gb|EDS38666.1| arrowhead [Culex quinquefasciatus]
Length = 257
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 17 ESGAGNSSPGSGVHS--HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
+ G +S G V +TKR+RT+F Q++ +++ F I+ NPD +DL+++A TGL
Sbjct: 128 DDGTTSSEDGCDVDGTGKNKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLERIALATGL 187
Query: 75 SKRVLQ 80
SKRV Q
Sbjct: 188 SKRVTQ 193
>gi|91078266|ref|XP_971202.1| PREDICTED: similar to GA10520-PA [Tribolium castaneum]
Length = 343
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 11 MESLSYESGAGNSSPGSGVHSH--QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQL 68
+E+L + G +S G + + KR+RT+F QL+ +++ F ++ NPD +DL+++
Sbjct: 199 LETL--DGGTTSSDDGCDAEGYHKNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 256
Query: 69 AQKTGLSKRVLQ 80
AQ TGLSKRV Q
Sbjct: 257 AQITGLSKRVTQ 268
>gi|322787267|gb|EFZ13403.1| hypothetical protein SINV_03010 [Solenopsis invicta]
Length = 334
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 10/76 (13%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
G+ +SS E E G S +TKR+RT+F QL +++ F ++ NPD +D
Sbjct: 180 GNNTSSSEDCDSEHGGKGS----------KTKRVRTTFTEEQLAVLQANFQMDSNPDGQD 229
Query: 65 LKQLAQKTGLSKRVLQ 80
L+++AQ TGLSKRV Q
Sbjct: 230 LERIAQVTGLSKRVTQ 245
>gi|157137279|ref|XP_001663969.1| arrowhead [Aedes aegypti]
gi|108869747|gb|EAT33972.1| AAEL013765-PA [Aedes aegypti]
Length = 201
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KR+RT+F QL +++ F I+ NPD +DL+++AQ TGLSKRV Q
Sbjct: 90 KSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQ 136
>gi|383857875|ref|XP_003704429.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 358
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
G+ +SS E E G S +TKR+RT+F QL +++ F ++ NPD +D
Sbjct: 204 GNNTSSSEDCDSEHGGKGS----------KTKRVRTTFTEEQLSVLQANFQLDSNPDGQD 253
Query: 65 LKQLAQKTGLSKRVLQ 80
L+++A TGLSKRV Q
Sbjct: 254 LERIAHVTGLSKRVTQ 269
>gi|350404762|ref|XP_003487212.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 331
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
G+ +SS E E G S +TKR+RT+F QL +++ F ++ NPD +D
Sbjct: 177 GNNTSSSEDCDSEHGGKGS----------KTKRVRTTFTEEQLSVLQANFQLDSNPDGQD 226
Query: 65 LKQLAQKTGLSKRVLQ 80
L+++A TGLSKRV Q
Sbjct: 227 LERIAHVTGLSKRVTQ 242
>gi|242003798|ref|XP_002422864.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
gi|212505746|gb|EEB10126.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
Length = 227
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLSKRV Q
Sbjct: 100 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 146
>gi|2285798|dbj|BAA21649.1| LIM-homeodomain protein [Mus musculus]
Length = 426
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 282 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 341
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 342 TGLSRRVIQ 350
>gi|340721085|ref|XP_003398956.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
Length = 329
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
G+ +SS E E G S +TKR+RT+F QL +++ F ++ NPD +D
Sbjct: 175 GNNTSSSEDCDSEHGGKGS----------KTKRVRTTFTEEQLSVLQANFQLDSNPDGQD 224
Query: 65 LKQLAQKTGLSKRVLQ 80
L+++A TGLSKRV Q
Sbjct: 225 LERIAHVTGLSKRVTQ 240
>gi|380013576|ref|XP_003690828.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 351
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 216 KTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 262
>gi|328781528|ref|XP_001121397.2| PREDICTED: LIM/homeobox protein Awh [Apis mellifera]
Length = 352
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 5 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
G+ +SS E E G S +TKR+RT+F QL +++ F ++ NPD +D
Sbjct: 198 GNNTSSSEDCDSEHGGKGS----------KTKRVRTTFTEEQLSVLQANFQLDSNPDGQD 247
Query: 65 LKQLAQKTGLSKRVLQ 80
L+++A TGLSKRV Q
Sbjct: 248 LERIAHVTGLSKRVTQ 263
>gi|345492348|ref|XP_001601137.2| PREDICTED: LIM/homeobox protein Awh-like [Nasonia vitripennis]
Length = 300
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 231 KTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 277
>gi|58866006|ref|NP_001012219.1| LIM/homeobox protein Lhx8 [Rattus norvegicus]
gi|58476609|gb|AAH90011.1| LIM homeobox 8 [Rattus norvegicus]
Length = 336
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|440907910|gb|ELR57994.1| LIM/homeobox protein Lhx8 [Bos grunniens mutus]
Length = 375
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 221 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 280
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 281 TGLSRRVIQ 289
>gi|358411510|ref|XP_589896.5| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
Length = 443
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 299 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 358
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 359 TGLSRRVIQ 367
>gi|345321290|ref|XP_003430404.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Ornithorhynchus
anatinus]
Length = 347
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 193 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 252
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 253 TGLSRRVIQ 261
>gi|224058535|ref|XP_002189228.1| PREDICTED: LIM/homeobox protein Lhx8 [Taeniopygia guttata]
Length = 347
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 193 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 252
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 253 TGLSRRVIQ 261
>gi|402590254|gb|EJW84185.1| LIM/homeobox protein Awh [Wuchereria bancrofti]
Length = 200
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+F QL ++++F I+ NPD DL+++A TGLSKRV Q
Sbjct: 79 KAKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQ 125
>gi|383857877|ref|XP_003704430.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 371
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG S + KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 216 SGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 269
>gi|327276679|ref|XP_003223095.1| PREDICTED: LIM/homeobox protein Lhx8-like [Anolis carolinensis]
Length = 379
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 225 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 284
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 285 TGLSRRVIQ 293
>gi|444727546|gb|ELW68032.1| LIM/homeobox protein Lhx8 [Tupaia chinensis]
Length = 348
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 194 ENGNGISVEGALLTDQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 253
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 254 TGLSRRVIQ 262
>gi|390466088|ref|XP_002751019.2| PREDICTED: LIM/homeobox protein Lhx8 [Callithrix jacchus]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|403257739|ref|XP_003921454.1| PREDICTED: LIM/homeobox protein Lhx8 [Saimiri boliviensis
boliviensis]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|281354377|gb|EFB29961.1| hypothetical protein PANDA_005098 [Ailuropoda melanoleuca]
Length = 351
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 197 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 256
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 257 TGLSRRVIQ 265
>gi|297473064|ref|XP_002686347.1| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
gi|296489244|tpg|DAA31357.1| TPA: LIM domain family member (lim-4)-like [Bos taurus]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|74213688|dbj|BAE35644.1| unnamed protein product [Mus musculus]
Length = 367
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 223 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 283 TGLSRRVIQ 291
>gi|332222205|ref|XP_003260257.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Nomascus
leucogenys]
Length = 356
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 202 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 262 TGLSRRVIQ 270
>gi|351696280|gb|EHA99198.1| LIM/homeobox protein Lhx8 [Heterocephalus glaber]
Length = 348
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 194 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 253
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 254 TGLSRRVIQ 262
>gi|297278964|ref|XP_001097664.2| PREDICTED: LIM/homeobox protein Lhx8-like [Macaca mulatta]
gi|402854981|ref|XP_003892128.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Papio anubis]
Length = 356
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 202 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 262 TGLSRRVIQ 270
>gi|410967547|ref|XP_003990280.1| PREDICTED: LIM/homeobox protein Lhx8 [Felis catus]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|395536948|ref|XP_003770470.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 362
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 208 ENGNGISVEGALLSEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 267
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 268 TGLSRRVIQ 276
>gi|50083287|ref|NP_001001933.1| LIM/homeobox protein Lhx8 isoform 1 [Homo sapiens]
gi|114557210|ref|XP_524738.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pan troglodytes]
gi|297664648|ref|XP_002810744.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pongo abelii]
gi|397521070|ref|XP_003830626.1| PREDICTED: LIM/homeobox protein Lhx8 [Pan paniscus]
gi|426330048|ref|XP_004026038.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Gorilla gorilla
gorilla]
gi|296434566|sp|Q68G74.2|LHX8_HUMAN RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8
Length = 356
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 202 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 262 TGLSRRVIQ 270
>gi|368711326|ref|NP_001243043.1| LIM/homeobox protein Lhx8 isoform 2 [Homo sapiens]
gi|395730366|ref|XP_003775714.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pongo abelii]
gi|410033125|ref|XP_003949492.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pan troglodytes]
gi|426330050|ref|XP_004026039.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Gorilla gorilla
gorilla]
gi|441637563|ref|XP_004090066.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Nomascus
leucogenys]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|340721611|ref|XP_003399211.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
gi|350404711|ref|XP_003487194.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 334
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG S + KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 178 SGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 231
>gi|291398678|ref|XP_002715959.1| PREDICTED: LIM homeobox 8 [Oryctolagus cuniculus]
Length = 371
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 223 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 283 TGLSRRVIQ 291
>gi|261490776|ref|NP_001159787.1| LIM/homeobox protein Lhx8 [Sus scrofa]
gi|238683613|gb|ACR54090.1| LIM homeobox 8 [Sus scrofa]
Length = 295
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 141 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 200
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 201 TGLSRRVIQ 209
>gi|51494804|gb|AAH40321.1| LIM homeobox 8 [Homo sapiens]
gi|312150920|gb|ADQ31972.1| LIM homeobox 8 [synthetic construct]
Length = 356
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 202 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 262 TGLSRRVIQ 270
>gi|402854983|ref|XP_003892129.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Papio anubis]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|344278994|ref|XP_003411276.1| PREDICTED: LIM/homeobox protein Lhx8 [Loxodonta africana]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|149026292|gb|EDL82535.1| rCG29002 [Rattus norvegicus]
Length = 367
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 223 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 283 TGLSRRVIQ 291
>gi|345321288|ref|XP_001521123.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Ornithorhynchus
anatinus]
Length = 347
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 193 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 252
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 253 TGLSRRVIQ 261
>gi|395821904|ref|XP_003784270.1| PREDICTED: LIM/homeobox protein Lhx8 [Otolemur garnettii]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 192 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 252 TGLSRRVIQ 260
>gi|148679946|gb|EDL11893.1| LIM homeobox protein 8, isoform CRA_a [Mus musculus]
Length = 291
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 152 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 211
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 212 TGLSRRVIQ 220
>gi|113195680|ref|NP_034843.2| LIM/homeobox protein Lhx8 [Mus musculus]
gi|341941136|sp|O35652.4|LHX8_MOUSE RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8; AltName: Full=L3; AltName: Full=LIM/homeobox protein
Lhx7; Short=LIM homeobox protein 7
gi|3172042|dbj|BAA28628.1| LIM-homeodomain protein [Mus musculus]
gi|74227158|dbj|BAE38359.1| unnamed protein product [Mus musculus]
gi|116138618|gb|AAI25284.1| LIM homeobox protein 8 [Mus musculus]
gi|116138795|gb|AAI25282.1| LIM homeobox protein 8 [Mus musculus]
gi|148679947|gb|EDL11894.1| LIM homeobox protein 8, isoform CRA_b [Mus musculus]
gi|219519204|gb|AAI44769.1| LIM homeobox protein 8 [Mus musculus]
gi|1587483|prf||2206477A LIM homeo domain transcription factor
Length = 367
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 223 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 283 TGLSRRVIQ 291
>gi|355745377|gb|EHH50002.1| hypothetical protein EGM_00758, partial [Macaca fascicularis]
Length = 320
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 166 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 225
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 226 TGLSRRVIQ 234
>gi|328781496|ref|XP_001121365.2| PREDICTED: LIM/homeobox protein Awh-like [Apis mellifera]
Length = 332
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG S + KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 176 SGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 229
>gi|301763072|ref|XP_002916962.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx8-like
[Ailuropoda melanoleuca]
Length = 574
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 430 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 489
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 490 TGLSRRVIQ 498
>gi|380013153|ref|XP_003690632.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 332
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG S + KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 176 SGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 229
>gi|3319763|emb|CAA04012.1| Lhx7 protein [Mus musculus]
Length = 365
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 222 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 281
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 282 TGLSRRVIQ 290
>gi|348586764|ref|XP_003479138.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cavia porcellus]
Length = 485
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 342 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 401
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 402 TGLSRRVIQ 410
>gi|90193535|gb|ABD92360.1| LIM/homeobox protein 6 [Astyanax mexicanus]
Length = 136
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Query: 17 ESGAGNSSPGSGVHSHQRT-----KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
ESG+G + G+ V S Q + KR RTSF QL+ M++ F + NPDA+ L++LA
Sbjct: 60 ESGSGLTLEGA-VPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADM 118
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 119 TGLSRRVIQ 127
>gi|158296017|ref|XP_001237835.2| AGAP006537-PA [Anopheles gambiae str. PEST]
gi|157016310|gb|EAU76621.2| AGAP006537-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 36/47 (76%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+TKR+RT+F Q++ +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 147 KTKRIRTTFTEEQIQILQANFQVDSNPDGQDLERIALATGLSKRVTQ 193
>gi|94957756|ref|NP_001035556.1| LIM/homeobox protein Lhx8 [Gallus gallus]
gi|71800649|gb|AAZ41374.1| LIM homeodomain protein [Gallus gallus]
Length = 347
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M + F + NPDA+ L++LA++
Sbjct: 193 ENGNGVSMEGALLTEQDVNHPKPAKRARTSFTADQLQVMXAQFAQDNNPDAQTLQKLAER 252
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 253 TGLSRRVIQ 261
>gi|410921222|ref|XP_003974082.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 324
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+KR RTSF QL+ M++ F + NPDA+ L++LA++TGLS+RV+Q
Sbjct: 205 SKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEQTGLSRRVIQ 250
>gi|354468096|ref|XP_003496503.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cricetulus griseus]
Length = 344
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 200 ENGNGISVEGALLTEQDVSHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 259
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 260 TGLSRRVIQ 268
>gi|426218775|ref|XP_004003612.1| PREDICTED: LIM/homeobox protein Lhx8 [Ovis aries]
Length = 442
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 288 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 347
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 348 TGLSRRVIQ 356
>gi|432853477|ref|XP_004067726.1| PREDICTED: LIM/homeobox protein Lhx8 [Oryzias latipes]
Length = 338
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+KR RTSF QL+ M++ F + NPDA+ L++LA++TGLS+RV+Q
Sbjct: 205 SKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEETGLSRRVIQ 250
>gi|51571947|ref|NP_001003980.1| LIM/homeobox protein Lhx8 [Danio rerio]
gi|50953779|gb|AAT90496.1| Lhx7 [Danio rerio]
gi|108742021|gb|AAI17602.1| LIM homeobox 8 [Danio rerio]
Length = 332
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G + G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 178 ENGKGVNVEGAVPSEQEVNQPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 237
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 238 TGLSRRVIQ 246
>gi|432915645|ref|XP_004079190.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oryzias latipes]
Length = 314
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA+KTGLS+RV+Q
Sbjct: 185 KRARTSFTVDQLQVMQTQFAKDNNPDAQTLQKLAEKTGLSRRVIQ 229
>gi|348505012|ref|XP_003440055.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 338
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+KR RTSF QL+ M++ F + NPDA+ L++LA++TGLS+RV+Q
Sbjct: 205 SKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEQTGLSRRVIQ 250
>gi|46276323|gb|AAS86420.1| lhx7 [Oryzias latipes]
Length = 191
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 15 SYESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
+ E G G + G+ ++ + +KR RTSF QL+ M++ F + NPDA+ L++LA
Sbjct: 112 AVEKGTGVNMEGAVPTEREINQPKPSKRARTSFPADQLQVMQAQFAQDNNPDAQTLQKLA 171
Query: 70 QKTGLSKRVLQ 80
++TGLS+RV+Q
Sbjct: 172 EETGLSRRVIQ 182
>gi|334321462|ref|XP_003340108.1| PREDICTED: LIM/homeobox protein Lhx8-like [Monodelphis domestica]
Length = 331
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 29 VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++TGLS+RV+Q
Sbjct: 230 VNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQ 281
>gi|345802215|ref|XP_547330.3| PREDICTED: LIM/homeobox protein Lhx8 [Canis lupus familiaris]
Length = 462
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 318 ENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 377
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 378 TGLSRRVIQ 386
>gi|322787264|gb|EFZ13400.1| hypothetical protein SINV_02203 [Solenopsis invicta]
Length = 333
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 185 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 231
>gi|47215186|emb|CAG01452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+KR RTSF QL+ M++ F + NPDA+ L++LA++TGLS+RV+Q
Sbjct: 162 SKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEQTGLSRRVIQ 207
>gi|344237493|gb|EGV93596.1| LIM/homeobox protein Lhx8 [Cricetulus griseus]
Length = 230
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G S G+ V + KR RTSF QL+ M++ F + NPDA+ L++LA++
Sbjct: 99 ENGNGISVEGALLTEQDVSHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 158
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 159 TGLSRRVIQ 167
>gi|410923575|ref|XP_003975257.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 310
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M+S F + NPDA+ L++LA+ TGLS+RV+Q
Sbjct: 181 AKRARTSFTAEQLQVMQSQFAQDNNPDAQTLQKLAEMTGLSRRVIQ 226
>gi|47221465|emb|CAG08127.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M+S F + NPDA+ L++LA+ TGLS+RV+Q
Sbjct: 168 AKRARTSFTAEQLQVMQSQFAQDNNPDAQTLQKLAEMTGLSRRVIQ 213
>gi|70570100|dbj|BAE06536.1| transcription factor protein [Ciona intestinalis]
Length = 170
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 51 KSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
K+YF+ N NPDAKDLKQLAQ+TGL+KRVLQ
Sbjct: 1 KAYFHQNHNPDAKDLKQLAQETGLTKRVLQ 30
>gi|432882277|ref|XP_004073955.1| PREDICTED: uncharacterized protein LOC101155206 [Oryzias latipes]
Length = 553
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 27/41 (65%)
Query: 40 TSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
T F+ QLR ++SYF NPD KD LA KTGL KRVLQ
Sbjct: 218 TCFRREQLRALESYFAQKHNPDGKDWTCLAHKTGLPKRVLQ 258
>gi|51571915|ref|NP_001004015.1| LIM/homeobox protein Lhx6 [Danio rerio]
gi|50953777|gb|AAT90495.1| Lhx6 [Danio rerio]
gi|190336767|gb|AAI62225.1| LIM homeobox 6 [Danio rerio]
Length = 375
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Query: 17 ESGAGNSSPGSGVHSHQRT-----KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
ESG+G + G+ V S Q + KR RTSF QL+ M++ F + NPDA+ L++LA
Sbjct: 224 ESGSGLTLEGA-VPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADM 282
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 283 TGLSRRVIQ 291
>gi|307195464|gb|EFN77350.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 291
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 144 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 190
>gi|358338012|dbj|GAA30958.2| LIM/homeobox protein Awh [Clonorchis sinensis]
Length = 482
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+SS SG H ++KR+RTSF QL +++ F++ NPD ++L+++A L+KRV Q
Sbjct: 171 DSSTSSGCSVHSKSKRIRTSFTPDQLAILQANFDVEANPDGQELERIANVARLNKRVTQ 229
>gi|307182931|gb|EFN69941.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 258
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 110 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQ 156
>gi|432872837|ref|XP_004072149.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 346
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA+ TGLS+RV+Q
Sbjct: 217 AKRARTSFTSEQLQVMQTQFAQDNNPDAQTLQKLAEMTGLSRRVIQ 262
>gi|354500653|ref|XP_003512413.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Cricetulus griseus]
Length = 377
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|133893073|ref|NP_001076594.1| LIM/homeobox protein Lhx6 isoform 2 [Mus musculus]
Length = 377
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|395824119|ref|XP_003785318.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Otolemur garnettii]
Length = 366
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|296482369|tpg|DAA24484.1| TPA: LIM homeobox 6 isoform 2 [Bos taurus]
Length = 377
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 248 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|149038911|gb|EDL93131.1| LIM homeobox protein 6 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 373
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 245 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 289
>gi|348533440|ref|XP_003454213.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 392
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA+ TGLS+RV+Q
Sbjct: 263 AKRARTSFTAEQLQVMQTQFAQDNNPDAQTLQKLAEMTGLSRRVIQ 308
>gi|410043125|ref|XP_003951564.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan troglodytes]
Length = 366
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 237 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|157821727|ref|NP_001101307.1| LIM/homeobox protein Lhx6 [Rattus norvegicus]
gi|149038910|gb|EDL93130.1| LIM homeobox protein 6 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 388
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 244 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 289
>gi|334191689|ref|NP_001229262.1| LIM/homeobox protein Lhx6 isoform 3 [Homo sapiens]
gi|221041678|dbj|BAH12516.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|390458313|ref|XP_003732090.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 4 [Callithrix jacchus]
Length = 366
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 237 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|74355622|gb|AAI03937.1| LIM homeobox 6 [Homo sapiens]
gi|119607921|gb|EAW87515.1| LIM homeobox 6, isoform CRA_a [Homo sapiens]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|390458309|ref|XP_003732088.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Callithrix jacchus]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|440906624|gb|ELR56864.1| LIM/homeobox protein Lhx6, partial [Bos grunniens mutus]
Length = 360
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 221 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 266
>gi|410043123|ref|XP_003312314.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pan troglodytes]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|354500655|ref|XP_003512414.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Cricetulus griseus]
Length = 366
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|281337700|gb|EFB13284.1| hypothetical protein PANDA_004030 [Ailuropoda melanoleuca]
Length = 360
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 221 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 266
>gi|5738960|dbj|BAA83423.1| LIM-homeodomain (LHX) protein 6.1b [Homo sapiens]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|344271985|ref|XP_003407817.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Loxodonta africana]
Length = 366
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|133892051|ref|NP_001076596.1| LIM/homeobox protein Lhx6 isoform 4 [Mus musculus]
gi|148676720|gb|EDL08667.1| LIM homeobox protein 6, isoform CRA_a [Mus musculus]
Length = 348
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|148676721|gb|EDL08668.1| LIM homeobox protein 6, isoform CRA_b [Mus musculus]
Length = 380
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 252 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 296
>gi|410978995|ref|XP_003995872.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Felis catus]
Length = 363
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 219 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|344271983|ref|XP_003407816.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Loxodonta africana]
Length = 377
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|74355157|gb|AAI03939.1| LIM homeobox 6 [Homo sapiens]
Length = 362
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 218 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 263
>gi|344241263|gb|EGV97366.1| LIM/homeobox protein Lhx6 [Cricetulus griseus]
Length = 363
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|390458307|ref|XP_002806566.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Callithrix jacchus]
Length = 363
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|348570158|ref|XP_003470864.1| PREDICTED: LIM/homeobox protein Lhx6-like [Cavia porcellus]
Length = 363
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|332029130|gb|EGI69141.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 292
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKR+ Q
Sbjct: 144 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRITQ 190
>gi|117645548|emb|CAL38240.1| hypothetical protein [synthetic construct]
Length = 363
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|133892446|ref|NP_001076595.1| LIM/homeobox protein Lhx6 isoform 3 [Mus musculus]
gi|341940899|sp|Q9R1R0.2|LHX6_MOUSE RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|40787713|gb|AAH65077.1| Lhx6 protein [Mus musculus]
Length = 363
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|334191691|ref|NP_001229263.1| LIM/homeobox protein Lhx6 isoform 4 [Homo sapiens]
gi|90185239|sp|Q9UPM6.2|LHX6_HUMAN RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|7018428|emb|CAB66505.1| hypothetical protein [Homo sapiens]
gi|74353529|gb|AAI03938.1| LIM homeobox 6 [Homo sapiens]
gi|117646920|emb|CAL37575.1| hypothetical protein [synthetic construct]
gi|119607922|gb|EAW87516.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|119607923|gb|EAW87517.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|158260677|dbj|BAF82516.1| unnamed protein product [Homo sapiens]
gi|189054037|dbj|BAG36544.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|167773589|gb|ABZ92229.1| LIM homeobox 6 [synthetic construct]
Length = 363
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|148676722|gb|EDL08669.1| LIM homeobox protein 6, isoform CRA_c [Mus musculus]
Length = 395
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 252 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 296
>gi|327291552|ref|XP_003230485.1| PREDICTED: LIM/homeobox protein Lhx6-like [Anolis carolinensis]
Length = 190
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 14 LSYESGAGNSSPGSGVHSHQ-----RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQL 68
L + SG G + G+ V S Q KR RTSF QL+ M++ F + NPDA+ L++L
Sbjct: 21 LPFLSGNGITLEGA-VPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKL 79
Query: 69 AQKTGLSKRVLQ 80
A TGLS+RV+Q
Sbjct: 80 ADMTGLSRRVIQ 91
>gi|5738958|dbj|BAA83422.1| LIM-homeodomain (LHX) protein 6.1a [Homo sapiens]
Length = 363
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|348531406|ref|XP_003453200.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 386
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA +TGLS+RV+Q
Sbjct: 257 KRARTSFTVDQLQVMQTQFAKDNNPDAQTLQKLADRTGLSRRVIQ 301
>gi|62859451|ref|NP_001015899.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
gi|89268071|emb|CAJ83129.1| LIM homeobox 7/8 [Xenopus (Silurana) tropicalis]
gi|110645724|gb|AAI18740.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
Length = 374
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++L+++TGLS+RV+Q
Sbjct: 244 KRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLSERTGLSRRVIQ 288
>gi|13509275|emb|CAC35218.1| Lhx7 protein [Xenopus laevis]
Length = 74
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 29 VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ + KR RTSF QL+ M++ F + NPDA+ L++L+++TGLS+RV+Q
Sbjct: 22 INQPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLSERTGLSRRVIQ 73
>gi|334311482|ref|XP_001364897.2| PREDICTED: LIM/homeobox protein Lhx6 [Monodelphis domestica]
Length = 391
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 247 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 292
>gi|363740595|ref|XP_001235421.2| PREDICTED: LIM/homeobox protein Lhx6 [Gallus gallus]
Length = 562
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 17 ESGAGNSSPGSGVHSHQRT-----KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G + G+ V S Q + KR RTSF QL+ M++ F + NPDA+ L++LA
Sbjct: 396 ENGNGITLEGA-VPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADM 454
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 455 TGLSRRVIQ 463
>gi|71361857|gb|AAZ30032.1| LIM homeodomain protein, partial [Gallus gallus]
Length = 235
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 17 ESGAGNSSPGSGVHSHQRT-----KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E+G G + G+ V S Q + KR RTSF QL+ M++ F + NPDA+ L++LA
Sbjct: 157 ENGNGITLEGA-VPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADM 215
Query: 72 TGLSKRVLQ 80
TGLS+RV+Q
Sbjct: 216 TGLSRRVIQ 224
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++KR+RT+F QL +++ F ++ NPD +DL+++A TGLSKRV Q
Sbjct: 139 KSKRVRTTFTEEQLHVLQANFLLDSNPDGQDLERIANLTGLSKRVTQ 185
>gi|410904301|ref|XP_003965630.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 373
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 245 KRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 289
>gi|432852001|ref|XP_004067146.1| PREDICTED: zinc finger homeobox protein 3-like [Oryzias latipes]
Length = 3769
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
HQ+ KR RT QLR ++ YF+IN +P+ + +K++A K+GL ++V++
Sbjct: 2197 HQQNKRPRTRITDDQLRVLRQYFDINNSPNEEQIKEMADKSGLPQKVIK 2245
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 7 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
L +E + S N S SG QR KR+RT+ QL + + ++ NP K L
Sbjct: 2664 LKRKLEEKASTSPGENDSTNSG-EEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLD 2722
Query: 67 QLAQKTGLSKRVLQ 80
+A + GL KRV+Q
Sbjct: 2723 HIAHEVGLKKRVVQ 2736
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 1 MLHSGDLSSSMESLSYESGA-GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
M+ + SS + S GA G S SG Q KR RT + QL+ +KS FN +
Sbjct: 2957 MIDHSETSSLADPCSPSPGASGTRSIDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRT 3014
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
P + + L + GL KRV+Q
Sbjct: 3015 PTMLECEVLGNEIGLPKRVVQ 3035
>gi|125823566|ref|XP_001339831.1| PREDICTED: LIM/homeobox protein Lhx8-like [Danio rerio]
Length = 356
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 8 SSSMESLSYESGAGNS-SP----GSGVHSHQR-TKRMRTSFKHHQLRTMKSYFNINQNPD 61
SS ++ L+ + G S SP +G Q+ +KR RTSF QL+ M++ F + NPD
Sbjct: 202 SSMLDKLNRPAEKGKSVSPEKALAAGCEIKQKPSKRARTSFTADQLQVMQAQFVQDNNPD 261
Query: 62 AKDLKQLAQKTGLSKRVLQ 80
A+ L+ LA++TGLS+RV+Q
Sbjct: 262 AQMLQSLAEQTGLSRRVIQ 280
>gi|432887976|ref|XP_004075005.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 366
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 237 AKRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|395505631|ref|XP_003757143.1| PREDICTED: LIM/homeobox protein Lhx6 [Sarcophilus harrisii]
Length = 363
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 219 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|110748616|gb|ABG89861.1| Lhx6, partial [Astyanax mexicanus]
Length = 303
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 17 ESGAGNSSPGSGVHSHQRT-----KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
ESG+G + G+ V S Q + KR RTSF QL+ M++ F + NPDA+ L++LA
Sbjct: 237 ESGSGLTLEGA-VPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADM 295
Query: 72 TGLSKRVL 79
TGLS+RV+
Sbjct: 296 TGLSRRVI 303
>gi|3319761|emb|CAA04011.1| Lhx6 protein [Mus musculus]
Length = 361
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|380806555|gb|AFE75153.1| LIM/homeobox protein Lhx6 isoform 4, partial [Macaca mulatta]
Length = 188
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 84 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 129
>gi|348513701|ref|XP_003444380.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 375
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 246 AKRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 291
>gi|334191693|ref|NP_001229264.1| LIM/homeobox protein Lhx6 isoform 5 [Homo sapiens]
Length = 176
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 32 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 77
>gi|301623765|ref|XP_002941184.1| PREDICTED: LIM/homeobox protein Lhx6-like [Xenopus (Silurana)
tropicalis]
Length = 389
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 245 AKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 290
>gi|431900754|gb|ELK08195.1| LIM/homeobox protein Lhx6 [Pteropus alecto]
Length = 272
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 112 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 156
>gi|225709660|gb|ACO10676.1| LIM/homeobox protein Awh [Caligus rogercresseyi]
Length = 274
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RMRT+F Q++ +++ F+I+ NPD +DL+++A TGLSKRV Q
Sbjct: 171 RMRTTFTEDQIQILQANFHIDSNPDGQDLERIAGITGLSKRVTQ 214
>gi|410927794|ref|XP_003977325.1| PREDICTED: LIM/homeobox protein Lhx6-like, partial [Takifugu
rubripes]
Length = 223
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 94 AKRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 139
>gi|5738954|dbj|BAA83420.1| LIM-homeodomain (LHX) protein 6.1b [Mus musculus]
Length = 348
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TG S+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGFSRRVIQ 264
>gi|345806125|ref|XP_003435390.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Canis lupus
familiaris]
Length = 392
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|301760410|ref|XP_002916006.1| PREDICTED: LIM/homeobox protein Lhx6-like [Ailuropoda melanoleuca]
Length = 390
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 247 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 291
>gi|5738956|dbj|BAA83421.1| LIM-homeodomain (LHX) protein 6.1a [Mus musculus]
Length = 363
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TG S+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGFSRRVIQ 264
>gi|350579610|ref|XP_003480648.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like [Sus
scrofa]
Length = 332
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F NPDA+ L++LA TGLS+RVLQ
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQVNNPDAQTLQKLADMTGLSRRVLQ 293
>gi|297270222|ref|XP_001089041.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Macaca mulatta]
Length = 392
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|402896489|ref|XP_003911330.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6 [Papio
anubis]
Length = 390
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|332832786|ref|XP_001135172.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pan troglodytes]
Length = 392
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|134284359|ref|NP_055183.2| LIM/homeobox protein Lhx6 isoform 1 [Homo sapiens]
gi|297685270|ref|XP_002820218.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pongo abelii]
gi|221042862|dbj|BAH13108.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|395824115|ref|XP_003785316.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Otolemur garnettii]
Length = 392
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|297270224|ref|XP_001088818.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Macaca mulatta]
Length = 377
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|410924249|ref|XP_003975594.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 338
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++L+ +TGLS+RV+Q
Sbjct: 211 KRARTSFTVDQLQVMQTQFAKDSNPDAQTLQRLSDRTGLSRRVIQ 255
>gi|134284361|ref|NP_954629.2| LIM/homeobox protein Lhx6 isoform 2 [Homo sapiens]
gi|297685272|ref|XP_002820219.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pongo abelii]
Length = 377
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|449268603|gb|EMC79459.1| LIM/homeobox protein Lhx6, partial [Columba livia]
Length = 263
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT+F QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 125 KRARTTFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 169
>gi|326668246|ref|XP_685757.4| PREDICTED: LIM/homeobox protein Lhx6 [Danio rerio]
Length = 270
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+KR RTSF Q++ M+++F ++NPDA L++LA TGLS+RV+Q
Sbjct: 180 SKRPRTSFTSEQIQIMQTHFIRDKNPDAATLQRLADTTGLSRRVIQ 225
>gi|133891794|ref|NP_032526.2| LIM/homeobox protein Lhx6 isoform 1 [Mus musculus]
Length = 392
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|353230379|emb|CCD76550.1| putative lim/homeobox protein Awh (Protein arrowhead) [Schistosoma
mansoni]
Length = 430
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 4 SGDLSSSMESLSYESG-AGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDA 62
+GD+S ++ E+G + +SS S H ++KR+RTSF QL +++ F+I NPD
Sbjct: 74 NGDISMTLT----ENGHSIDSSTSSNCSIHSKSKRIRTSFTPDQLAILQANFDIEANPDG 129
Query: 63 KDLKQLAQKTGLSKRVLQ 80
++L+++A L+KRV Q
Sbjct: 130 QELERIAGMAKLNKRVTQ 147
>gi|403266043|ref|XP_003925207.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|395824117|ref|XP_003785317.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Otolemur garnettii]
Length = 377
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|345806127|ref|XP_548475.3| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Canis lupus
familiaris]
Length = 363
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 220 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 264
>gi|345329744|ref|XP_001512364.2| PREDICTED: LIM/homeobox protein Lhx6 [Ornithorhynchus anatinus]
Length = 364
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 221 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 265
>gi|297685274|ref|XP_002820220.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Pongo abelii]
Length = 366
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|390458311|ref|XP_003732089.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Callithrix jacchus]
Length = 381
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|300797193|ref|NP_001179777.1| LIM/homeobox protein Lhx6 [Bos taurus]
gi|296482368|tpg|DAA24483.1| TPA: LIM homeobox 6 isoform 1 [Bos taurus]
Length = 392
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|148676723|gb|EDL08670.1| LIM homeobox protein 6, isoform CRA_d [Mus musculus]
Length = 388
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 245 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 289
>gi|403266045|ref|XP_003925208.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|256078209|ref|XP_002575389.1| arrowhead [Schistosoma mansoni]
Length = 421
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 4 SGDLSSSMESLSYESG-AGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDA 62
+GD+S ++ E+G + +SS S H ++KR+RTSF QL +++ F+I NPD
Sbjct: 65 NGDISMTLT----ENGHSIDSSTSSNCSIHSKSKRIRTSFTPDQLAILQANFDIEANPDG 120
Query: 63 KDLKQLAQKTGLSKRVLQ 80
++L+++A L+KRV Q
Sbjct: 121 QELERIAGMAKLNKRVTQ 138
>gi|410978997|ref|XP_003995873.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Felis catus]
Length = 404
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|397526998|ref|XP_003833397.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan paniscus]
Length = 377
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 234 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 278
>gi|354500651|ref|XP_003512412.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Cricetulus griseus]
Length = 392
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|344271981|ref|XP_003407815.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Loxodonta africana]
Length = 392
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 249 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 293
>gi|297270226|ref|XP_002800034.1| PREDICTED: LIM/homeobox protein Lhx6 [Macaca mulatta]
Length = 366
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 238 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 282
>gi|444724034|gb|ELW64656.1| LIM/homeobox protein Lhx6 [Tupaia chinensis]
Length = 336
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 198 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 242
>gi|449478466|ref|XP_002188127.2| PREDICTED: LIM/homeobox protein Lhx6 [Taeniopygia guttata]
Length = 421
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RTSF QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 278 KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 322
>gi|326669693|ref|XP_002663048.2| PREDICTED: zinc finger homeobox protein 3-like [Danio rerio]
Length = 3789
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 34/48 (70%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P+ + +K++A K+GL ++V++
Sbjct: 2268 QQNKRPRTRITDDQLRVLRQYFDINNSPNEEQIKEMADKSGLPQKVIK 2315
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 8 SSSMESLS--YESGAGNSSPG------SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
+S+M SL E AG +SPG SG QR KR+RT+ QL + + ++ N
Sbjct: 2725 TSTMNSLKRKLEEKAG-TSPGESDSMNSG-EEPQRDKRLRTTITPEQLEILYQKYLLDSN 2782
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
P K L +A + GL KRV+Q
Sbjct: 2783 PTRKMLDHIAHEVGLKKRVVQ 2803
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 1 MLHSGDLSSSMESLSYESGA-GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQN 59
M+ + SS + S GA G+ S SG Q KR RT + QL+ +KS F+ +
Sbjct: 3023 MIDYSETSSLADPCSPSPGASGSRSIDSGDRPGQ--KRFRTQMTNLQLKVLKSCFSDYRT 3080
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
P + + L GL KRV+Q
Sbjct: 3081 PTMLECEVLGNDIGLPKRVVQ 3101
>gi|405976917|gb|EKC41395.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 280
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G++ S + S + KR+R+SF QL+ +++ F I NPD+++L ++A G+S+RV Q
Sbjct: 173 GDTDKDSELSSKPKAKRVRSSFTEEQLQILQANFRIESNPDSQELNRIAITAGVSRRVAQ 232
>gi|312379882|gb|EFR26035.1| hypothetical protein AND_08145 [Anopheles darlingi]
Length = 324
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
SGD S S +SL G G S P G + R+RT QL T+++ +N N PDA
Sbjct: 95 SGDESGSHKSLR---GKGPSGPSDG-----KPTRVRTVLNEKQLHTLRTCYNANPRPDAL 146
Query: 64 DLKQLAQKTGLSKRVLQ 80
+QL + TGLS RV++
Sbjct: 147 MKEQLVEMTGLSPRVIR 163
>gi|345793145|ref|XP_853266.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4 [Canis
lupus familiaris]
Length = 3624
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2131 GFLRHSQFKRPRTRITDDQLKXLRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2183
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2607 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2659
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2939 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2983
>gi|148679469|gb|EDL11416.1| AT motif binding factor 1 [Mus musculus]
Length = 3726
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2149 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2197
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2633 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2692
Query: 78 VLQ 80
V+Q
Sbjct: 2693 VVQ 2695
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG G PG KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2945 SGDGGDRPGQ--------KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2996
Query: 78 VLQ 80
V+Q
Sbjct: 2997 VVQ 2999
>gi|110225364|ref|NP_031522.2| zinc finger homeobox protein 3 [Mus musculus]
Length = 3723
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2149 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2197
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2633 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2692
Query: 78 VLQ 80
V+Q
Sbjct: 2693 VVQ 2695
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG G PG KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2945 SGDGGDRPGQ--------KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2996
Query: 78 VLQ 80
V+Q
Sbjct: 2997 VVQ 2999
>gi|149411850|ref|XP_001509863.1| PREDICTED: zinc finger homeobox protein 3 [Ornithorhynchus anatinus]
Length = 3710
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2148 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2196
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2641 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2700
Query: 78 VLQ 80
V+Q
Sbjct: 2701 VVQ 2703
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG G PG KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2954 SGDGGERPGQ--------KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 3005
Query: 78 VLQ 80
V+Q
Sbjct: 3006 VVQ 3008
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 9 SSMESLSYESGAGNSSPGSGVHSHQRTKRM-RTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
+S+E L +S SP H + +KR RT F +QLR ++ +F+ N P + +Q
Sbjct: 2223 TSLEELKIDSRP--PSPEPQKHEYWGSKRSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQ 2280
Query: 68 LAQKTGLSKRVL 79
L+ L RV+
Sbjct: 2281 LSNLLNLPTRVI 2292
>gi|18202592|sp|Q61329.1|ZFHX3_MOUSE RecName: Full=Zinc finger homeobox protein 3; AltName: Full=AT
motif-binding factor; AltName: Full=AT-binding
transcription factor 1; AltName: Full=Alpha-fetoprotein
enhancer-binding protein; AltName: Full=Zinc finger
homeodomain protein 3; Short=ZFH-3
gi|1345408|dbj|BAA05046.1| AT motif-binding factor [Mus musculus]
gi|1587706|prf||2207230A transcription factor ATBF1
Length = 3726
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2149 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2197
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2633 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2692
Query: 78 VLQ 80
V+Q
Sbjct: 2693 VVQ 2695
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG G PG KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2945 SGDGGDRPGQ--------KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2996
Query: 78 VLQ 80
V+Q
Sbjct: 2997 VVQ 2999
>gi|62665251|ref|XP_226464.3| PREDICTED: zinc finger homeobox protein 3 isoform 2 [Rattus
norvegicus]
Length = 3730
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2153 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2201
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 12 ESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E S S N S G+G QR KR+RT+ QL + + ++ NP K L +A +
Sbjct: 2630 EKASGASPGENDSSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHE 2689
Query: 72 TGLSKRVLQ 80
GL KRV+Q
Sbjct: 2690 VGLKKRVVQ 2698
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2942 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2999
Query: 78 VLQ 80
V+Q
Sbjct: 3000 VVQ 3002
>gi|293343347|ref|XP_001076847.2| PREDICTED: zinc finger homeobox protein 3 [Rattus norvegicus]
Length = 3720
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2143 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2191
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 12 ESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E S S N S G+G QR KR+RT+ QL + + ++ NP K L +A +
Sbjct: 2620 EKASGASPGENDSSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHE 2679
Query: 72 TGLSKRVLQ 80
GL KRV+Q
Sbjct: 2680 VGLKKRVVQ 2688
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2932 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2989
Query: 78 VLQ 80
V+Q
Sbjct: 2990 VVQ 2992
>gi|449473037|ref|XP_004176289.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
[Taeniopygia guttata]
Length = 3402
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2057 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2105
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2538 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2597
Query: 78 VLQ 80
V+Q
Sbjct: 2598 VVQ 2600
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAK 63
+ SS + S GA S+ SG S R KR RT + QL+ +KS FN + P
Sbjct: 2830 ETSSLADPCSPSPGASGSASKSG-ESGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2888
Query: 64 DLKQLAQKTGLSKRVLQ 80
+ + L GL KRV+Q
Sbjct: 2889 ECEVLGNDIGLPKRVVQ 2905
>gi|426382857|ref|XP_004058017.1| PREDICTED: zinc finger homeobox protein 3 [Gorilla gorilla gorilla]
Length = 3637
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2156 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2204
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2638 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2697
Query: 78 VLQ 80
V+Q
Sbjct: 2698 VVQ 2700
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2945 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 3002
Query: 78 VLQ 80
V+Q
Sbjct: 3003 VVQ 3005
>gi|363738419|ref|XP_414230.3| PREDICTED: zinc finger homeobox protein 3 [Gallus gallus]
Length = 3669
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2144 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2192
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2626 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2685
Query: 78 VLQ 80
V+Q
Sbjct: 2686 VVQ 2688
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAK 63
+ SS + S GA S+ SG S R KR RT + QL+ +KS FN + P
Sbjct: 2918 ETSSLADPCSPSPGASGSASKSG-ESGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2976
Query: 64 DLKQLAQKTGLSKRVLQ 80
+ + L GL KRV+Q
Sbjct: 2977 ECEVLGNDIGLPKRVVQ 2993
>gi|354494575|ref|XP_003509412.1| PREDICTED: zinc finger homeobox protein 3-like [Cricetulus griseus]
Length = 3678
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2117 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2165
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2597 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2656
Query: 78 VLQ 80
V+Q
Sbjct: 2657 VVQ 2659
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2903 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2960
Query: 78 VLQ 80
V+Q
Sbjct: 2961 VVQ 2963
>gi|73957122|ref|XP_851092.1| PREDICTED: zinc finger homeobox protein 3 isoform 2 [Canis lupus
familiaris]
Length = 3710
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2151 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2199
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2632 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2691
Query: 78 VLQ 80
V+Q
Sbjct: 2692 VVQ 2694
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2939 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2996
Query: 78 VLQ 80
V+Q
Sbjct: 2997 VVQ 2999
>gi|281347541|gb|EFB23125.1| hypothetical protein PANDA_012821 [Ailuropoda melanoleuca]
Length = 3693
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2139 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2187
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2620 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2679
Query: 78 VLQ 80
V+Q
Sbjct: 2680 VVQ 2682
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2927 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2984
Query: 78 VLQ 80
V+Q
Sbjct: 2985 VVQ 2987
>gi|149699291|ref|XP_001500191.1| PREDICTED: zinc finger homeobox protein 3 isoform 1 [Equus caballus]
Length = 3702
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2144 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2192
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+G QR KR+RT+ QL + + ++ NP K L +A + GL KRV+Q
Sbjct: 2633 GTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQ 2687
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2932 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2989
Query: 78 VLQ 80
V+Q
Sbjct: 2990 VVQ 2992
>gi|301776448|ref|XP_002923644.1| PREDICTED: zinc finger homeobox protein 3-like [Ailuropoda
melanoleuca]
Length = 3694
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2130 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2178
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2611 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2670
Query: 78 VLQ 80
V+Q
Sbjct: 2671 VVQ 2673
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2918 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2975
Query: 78 VLQ 80
V+Q
Sbjct: 2976 VVQ 2978
>gi|118498345|ref|NP_008816.3| zinc finger homeobox protein 3 isoform A [Homo sapiens]
gi|108935822|sp|Q15911.2|ZFHX3_HUMAN RecName: Full=Zinc finger homeobox protein 3; AltName: Full=AT
motif-binding factor; AltName: Full=AT-binding
transcription factor 1; AltName: Full=Alpha-fetoprotein
enhancer-binding protein; AltName: Full=Zinc finger
homeodomain protein 3; Short=ZFH-3
gi|119579572|gb|EAW59168.1| AT-binding transcription factor 1, isoform CRA_a [Homo sapiens]
gi|119579574|gb|EAW59170.1| AT-binding transcription factor 1, isoform CRA_a [Homo sapiens]
Length = 3703
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2142 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2190
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2624 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2683
Query: 78 VLQ 80
V+Q
Sbjct: 2684 VVQ 2686
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2931 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2988
Query: 78 VLQ 80
V+Q
Sbjct: 2989 VVQ 2991
>gi|397518803|ref|XP_003829566.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Pan paniscus]
Length = 3652
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2143 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2625 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2684
Query: 78 VLQ 80
V+Q
Sbjct: 2685 VVQ 2687
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2932 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2989
Query: 78 VLQ 80
V+Q
Sbjct: 2990 VVQ 2992
>gi|334313043|ref|XP_001367139.2| PREDICTED: zinc finger homeobox protein 3 [Monodelphis domestica]
Length = 2658
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1053 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1101
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1544 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1603
Query: 78 VLQ 80
V+Q
Sbjct: 1604 VVQ 1606
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 9 SSMESLSYESGAGNSSPGSGVHSHQRTKRM-RTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
+S+E L +S SP H + +KR RT F +QLR ++ +F+ N P + +Q
Sbjct: 1128 TSLEELKIDSRP--PSPEPQKHEYWGSKRSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQ 1185
Query: 68 LAQKTGLSKRVL 79
L+ L RV+
Sbjct: 1186 LSNLLNLPTRVI 1197
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 1851 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 1908
Query: 78 VLQ 80
V+Q
Sbjct: 1909 VVQ 1911
>gi|441597660|ref|XP_004087398.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Nomascus leucogenys]
Length = 3433
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1927 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1975
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2409 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2468
Query: 78 VLQ 80
V+Q
Sbjct: 2469 VVQ 2471
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2716 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2773
Query: 78 VLQ 80
V+Q
Sbjct: 2774 VVQ 2776
>gi|3924672|gb|AAC79153.1| unknown [Homo sapiens]
Length = 2553
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 992 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1040
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1474 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1533
Query: 78 VLQ 80
V+Q
Sbjct: 1534 VVQ 1536
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 1781 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 1838
Query: 78 VLQ 80
V+Q
Sbjct: 1839 VVQ 1841
>gi|403298406|ref|XP_003940012.1| PREDICTED: zinc finger homeobox protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 3695
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2140 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2188
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2623 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2682
Query: 78 VLQ 80
V+Q
Sbjct: 2683 VVQ 2685
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2930 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2987
Query: 78 VLQ 80
V+Q
Sbjct: 2988 VVQ 2990
>gi|395837017|ref|XP_003791442.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
[Otolemur garnettii]
Length = 3725
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2149 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2197
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2631 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2690
Query: 78 VLQ 80
V+Q
Sbjct: 2691 VVQ 2693
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2938 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2995
Query: 78 VLQ 80
V+Q
Sbjct: 2996 VVQ 2998
>gi|395748045|ref|XP_002826643.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Pongo abelii]
Length = 3688
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2133 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2181
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2615 ASPGENDSGMGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2674
Query: 78 VLQ 80
V+Q
Sbjct: 2675 VVQ 2677
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2922 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2979
Query: 78 VLQ 80
V+Q
Sbjct: 2980 VVQ 2982
>gi|355710346|gb|EHH31810.1| Zinc finger homeodomain protein 3 [Macaca mulatta]
Length = 3690
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2137 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2185
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2619 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2678
Query: 78 VLQ 80
V+Q
Sbjct: 2679 VVQ 2681
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2926 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2983
Query: 78 VLQ 80
V+Q
Sbjct: 2984 VVQ 2986
>gi|976347|gb|AAC14462.1| zinc finger homeodomain protein [Homo sapiens]
gi|1585921|prf||2202255A AT motif-binding factor 1
Length = 3703
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2142 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2190
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2624 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2683
Query: 78 VLQ 80
V+Q
Sbjct: 2684 VVQ 2686
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2931 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2988
Query: 78 VLQ 80
V+Q
Sbjct: 2989 VVQ 2991
>gi|402908905|ref|XP_003917172.1| PREDICTED: zinc finger homeobox protein 3 [Papio anubis]
Length = 3688
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2135 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2183
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2617 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2676
Query: 78 VLQ 80
V+Q
Sbjct: 2677 VVQ 2679
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2924 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2981
Query: 78 VLQ 80
V+Q
Sbjct: 2982 VVQ 2984
>gi|426243639|ref|XP_004015658.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3,
partial [Ovis aries]
Length = 3623
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2138 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2186
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2620 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2679
Query: 78 VLQ 80
V+Q
Sbjct: 2680 VVQ 2682
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2927 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2984
Query: 78 VLQ 80
V+Q
Sbjct: 2985 VVQ 2987
>gi|417414463|gb|JAA53524.1| Putative homeobox protein, partial [Desmodus rotundus]
Length = 3518
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2146 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2194
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2627 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2686
Query: 78 VLQ 80
V+Q
Sbjct: 2687 VVQ 2689
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2934 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2991
Query: 78 VLQ 80
V+Q
Sbjct: 2992 VVQ 2994
>gi|410983863|ref|XP_003998256.1| PREDICTED: zinc finger homeobox protein 3 [Felis catus]
Length = 3687
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2132 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2180
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2613 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2672
Query: 78 VLQ 80
V+Q
Sbjct: 2673 VVQ 2675
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2920 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2977
Query: 78 VLQ 80
V+Q
Sbjct: 2978 VVQ 2980
>gi|351699624|gb|EHB02543.1| Zinc finger homeobox protein 3 [Heterocephalus glaber]
Length = 3731
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2355 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2403
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2836 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2895
Query: 78 VLQ 80
V+Q
Sbjct: 2896 VVQ 2898
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 3142 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 3199
Query: 78 VLQ 80
V+Q
Sbjct: 3200 VVQ 3202
>gi|344290755|ref|XP_003417103.1| PREDICTED: zinc finger homeobox protein 3 [Loxodonta africana]
Length = 3691
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2133 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2181
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2614 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2673
Query: 78 VLQ 80
V+Q
Sbjct: 2674 VVQ 2676
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAK 63
+ SS + S GA S+ SG S R KR RT + QL+ +KS FN + P
Sbjct: 2906 ETSSLADPCSPSPGASGSTGKSG-DSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2964
Query: 64 DLKQLAQKTGLSKRVLQ 80
+ + L GL KRV+Q
Sbjct: 2965 ECEVLGNDIGLPKRVVQ 2981
>gi|403298408|ref|XP_003940013.1| PREDICTED: zinc finger homeobox protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 3704
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2149 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2197
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2632 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2691
Query: 78 VLQ 80
V+Q
Sbjct: 2692 VVQ 2694
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2939 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2996
Query: 78 VLQ 80
V+Q
Sbjct: 2997 VVQ 2999
>gi|358416638|ref|XP_003583442.1| PREDICTED: zinc finger homeobox protein 3-like [Bos taurus]
gi|359075343|ref|XP_003587277.1| PREDICTED: zinc finger homeobox protein 3-like [Bos taurus]
Length = 3695
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2143 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2625 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2684
Query: 78 VLQ 80
V+Q
Sbjct: 2685 VVQ 2687
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2932 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2989
Query: 78 VLQ 80
V+Q
Sbjct: 2990 VVQ 2992
>gi|109129073|ref|XP_001102605.1| PREDICTED: zinc finger homeobox protein 3-like isoform 2 [Macaca
mulatta]
Length = 3690
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2137 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2185
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2619 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2678
Query: 78 VLQ 80
V+Q
Sbjct: 2679 VVQ 2681
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2926 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2983
Query: 78 VLQ 80
V+Q
Sbjct: 2984 VVQ 2986
>gi|410050584|ref|XP_003315250.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3 [Pan
troglodytes]
Length = 3679
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2129 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2177
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2611 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2670
Query: 78 VLQ 80
V+Q
Sbjct: 2671 VVQ 2673
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2918 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2975
Query: 78 VLQ 80
V+Q
Sbjct: 2976 VVQ 2978
>gi|395508596|ref|XP_003758596.1| PREDICTED: zinc finger homeobox protein 3 [Sarcophilus harrisii]
Length = 3305
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2133 QQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2180
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2609 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2668
Query: 78 VLQ 80
V+Q
Sbjct: 2669 VVQ 2671
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 9 SSMESLSYESGAGNSSPGSGVHSHQRTKRM-RTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
+S+E L +S SP H + +KR RT F +QLR ++ +F+ N P + +Q
Sbjct: 2207 TSLEELKIDSRP--PSPEPQKHEYWGSKRSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQ 2264
Query: 68 LAQKTGLSKRVL 79
L+ L RV+
Sbjct: 2265 LSNLLNLPTRVI 2276
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAK 63
+ SS + S GA S+ SG S R KR RT + QL+ +KS FN + P
Sbjct: 2901 ETSSLADPCSPSPGASGSASKSG-DSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2959
Query: 64 DLKQLAQKTGLSKRVLQ 80
+ + L GL KRV+Q
Sbjct: 2960 ECEVLGNDIGLPKRVVQ 2976
>gi|350584925|ref|XP_003126964.3| PREDICTED: zinc finger homeobox protein 3 [Sus scrofa]
Length = 2734
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1175 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1223
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1656 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1715
Query: 78 VLQ 80
V+Q
Sbjct: 1716 VVQ 1718
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAK 63
+ SS + S GA S+ G S R KR RT + QL+ +KS FN + P
Sbjct: 1948 ETSSLADPCSPSPGASGSA-GKAGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2006
Query: 64 DLKQLAQKTGLSKRVLQ 80
+ + L GL KRV+Q
Sbjct: 2007 ECEVLGNDIGLPKRVVQ 2023
>gi|440905393|gb|ELR55770.1| Zinc finger homeobox protein 3, partial [Bos grunniens mutus]
Length = 3501
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1964 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2012
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2446 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2505
Query: 78 VLQ 80
V+Q
Sbjct: 2506 VVQ 2508
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2753 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2810
Query: 78 VLQ 80
V+Q
Sbjct: 2811 VVQ 2813
>gi|38511959|gb|AAH60729.1| Zfhx3 protein [Mus musculus]
Length = 1707
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 133 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 181
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 617 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 676
Query: 78 VLQ 80
V+Q
Sbjct: 677 VVQ 679
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG G PG KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 929 SGDGGDRPGQ--------KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 980
Query: 78 VLQ 80
V+Q
Sbjct: 981 VVQ 983
>gi|390477913|ref|XP_002761070.2| PREDICTED: zinc finger homeobox protein 3-like [Callithrix jacchus]
Length = 2873
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1314 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1362
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1797 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1856
Query: 78 VLQ 80
V+Q
Sbjct: 1857 VVQ 1859
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2104 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2161
Query: 78 VLQ 80
V+Q
Sbjct: 2162 VVQ 2164
>gi|355730108|gb|AES10092.1| zinc finger homeobox 3 [Mustela putorius furo]
Length = 1675
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 411 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 459
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 898 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 957
Query: 78 VLQ 80
V+Q
Sbjct: 958 VVQ 960
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 1205 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 1262
Query: 78 VLQ 80
V+Q
Sbjct: 1263 VVQ 1265
>gi|344253805|gb|EGW09909.1| Zinc finger homeobox protein 3 [Cricetulus griseus]
Length = 2785
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1224 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1272
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1704 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1763
Query: 78 VLQ 80
V+Q
Sbjct: 1764 VVQ 1766
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2010 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2067
Query: 78 VLQ 80
V+Q
Sbjct: 2068 VVQ 2070
>gi|258613987|ref|NP_001158238.1| zinc finger homeobox protein 3 isoform B [Homo sapiens]
Length = 2789
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1228 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1276
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1710 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1769
Query: 78 VLQ 80
V+Q
Sbjct: 1770 VVQ 1772
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2017 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2074
Query: 78 VLQ 80
V+Q
Sbjct: 2075 VVQ 2077
>gi|219430|dbj|BAA01095.1| alpha-fetoprotein enhancer binding protein [Homo sapiens]
Length = 2783
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 1228 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 1276
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1710 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1769
Query: 78 VLQ 80
V+Q
Sbjct: 1770 VVQ 1772
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 2017 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 2074
Query: 78 VLQ 80
V+Q
Sbjct: 2075 VVQ 2077
>gi|301616353|ref|XP_002937624.1| PREDICTED: zinc finger homeobox protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 3703
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2204 QQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2251
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2687 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2746
Query: 78 VLQ 80
V+Q
Sbjct: 2747 VVQ 2749
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
M+ + SS + S GA S+ SG KR RT + QL+ +KS FN + P
Sbjct: 2973 MVDYSETSSLADPCSPSPGASGSAGKSG-EDRPGQKRFRTQMTNLQLKLLKSCFNDYRTP 3031
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
+ + L GL KRV+Q
Sbjct: 3032 TMLECEVLGNDIGLPKRVVQ 3051
>gi|432114178|gb|ELK36211.1| Zinc finger homeobox protein 3 [Myotis davidii]
Length = 1761
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 358 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 406
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 838 ASPGENDSGTG-EEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 896
Query: 78 VLQ 80
V+Q
Sbjct: 897 VVQ 899
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQR-TKRMRTSFKHHQLRTMKSYFNINQNPDAKD 64
+ SS + S GA S+ SG + + KR RT + QL+ +KS FN + P +
Sbjct: 1129 ETSSLADPCSPSPGASGSAGKSGDNGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLE 1188
Query: 65 LKQLAQKTGLSKRVLQ 80
+ L GL KRV+Q
Sbjct: 1189 CEVLGNDIGLPKRVVQ 1204
>gi|326927596|ref|XP_003209977.1| PREDICTED: zinc finger homeobox protein 3-like, partial [Meleagris
gallopavo]
Length = 3034
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2034 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2082
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 2516 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 2575
Query: 78 VLQ 80
V+Q
Sbjct: 2576 VVQ 2578
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAK 63
+ SS + S GA S+ SG S R KR RT + QL+ +KS FN + P
Sbjct: 2808 ETSSLADPCSPSPGASGSASKSG-ESGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2866
Query: 64 DLKQLAQKTGLSKRVLQ 80
+ + L GL KRV+Q
Sbjct: 2867 ECEVLGNDIGLPKRVVQ 2883
>gi|338728281|ref|XP_001914953.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4 [Equus
caballus]
Length = 3619
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2129 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2177
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2601 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2653
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2933 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2977
>gi|410987327|ref|XP_003999956.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4 [Felis
catus]
Length = 3615
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2127 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2175
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2597 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2649
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2929 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2973
>gi|410913197|ref|XP_003970075.1| PREDICTED: zinc finger homeobox protein 3-like [Takifugu rubripes]
Length = 3640
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P+ +K++A K+GL ++V++
Sbjct: 2076 QQNKRPRTRITDDQLRILRQYFDINNSPNEDQIKEMADKSGLPQKVIK 2123
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 7 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
L +E S S N S SG QR KR+RT+ QL + + ++ NP K L+
Sbjct: 2544 LKRKLEEKSCTSPGENDSTNSG-EEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLE 2602
Query: 67 QLAQKTGLSKRVLQ 80
+A + GL KRV+Q
Sbjct: 2603 HIAHEVGLKKRVVQ 2616
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +KS FN + P + + L GL KRV+Q
Sbjct: 2872 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGSDIGLPKRVVQ 2916
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 8 SSSMESLSYESGAGNSSPGSGVHSHQRTKRM-RTSFKHHQLRTMKSYFNINQNPDAKDLK 66
++++E ++S P H + +KR RT F +QLR ++ +F+ N P + +
Sbjct: 2149 TTTLEEAKFDSKPPTPEPQK--HEYYGSKRSSRTRFTDYQLRVLQDFFDANAYPKDDEFE 2206
Query: 67 QLAQKTGLSKRVL 79
QL+ L RV+
Sbjct: 2207 QLSNLLSLPTRVI 2219
>gi|395818331|ref|XP_003782587.1| PREDICTED: zinc finger homeobox protein 4 [Otolemur garnettii]
Length = 3624
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2136 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2184
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2606 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2658
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GN PG KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2931 GNDRPGH--------KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2982
>gi|291388151|ref|XP_002710692.1| PREDICTED: zinc finger homeodomain 4 [Oryctolagus cuniculus]
Length = 3619
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2133 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2181
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2601 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2653
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2933 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2977
>gi|444705870|gb|ELW47254.1| Zinc finger homeobox protein 4 [Tupaia chinensis]
Length = 3552
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2064 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2112
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2534 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2586
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 8 SSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
+SS+ S + G+S+P S++R KR RT + QL+ +K+ F+ + P ++
Sbjct: 2837 TSSIADPSSPNPFGSSNPFKS-KSNERPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQEC 2895
Query: 66 KQLAQKTGLSKRVLQ 80
+ L + GL KRV+Q
Sbjct: 2896 EMLGNEIGLPKRVVQ 2910
>gi|426235664|ref|XP_004011800.1| PREDICTED: zinc finger homeobox protein 4 [Ovis aries]
Length = 3586
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2094 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2142
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2565 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2617
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2897 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2941
>gi|330340393|ref|NP_001180156.2| zinc finger homeobox protein 4 [Bos taurus]
Length = 3622
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2130 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2178
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2601 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2653
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2933 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2977
>gi|297683109|ref|XP_002819238.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4 [Pongo
abelii]
Length = 3129
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 1664 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 1712
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2136 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2188
>gi|297299625|ref|XP_001089817.2| PREDICTED: zinc finger homeobox protein 4-like [Macaca mulatta]
Length = 3206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 1716 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 1764
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2188 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2240
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2520 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2564
>gi|126253844|sp|O73590.2|ZFHX4_CHICK RecName: Full=Zinc finger homeobox protein 4; AltName: Full=Zinc
finger homeodomain protein 4; Short=ZFH-4; AltName:
Full=Zinc finger/apterous-related homeobox protein
Length = 3573
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2069 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2117
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 3 HSGDLSSSMESLSYESGAGNSSPGSGVHSHQ---RTKRMRTSFKHHQLRTMKSYFNINQN 59
H +S SM+ + N S G +S + R KR+RT+ QL + + ++ N
Sbjct: 2513 HPATVSGSMKRKLDDKEDNNCSEKEGGNSGEDQHRDKRLRTTITPEQLEILYEKYLLDSN 2572
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
P K L +A++ GL KRV+Q
Sbjct: 2573 PTRKMLDHIAREVGLKKRVVQ 2593
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2875 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2919
>gi|431912427|gb|ELK14561.1| Zinc finger homeobox protein 3 [Pteropus alecto]
Length = 1804
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 690 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 738
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 1171 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 1230
Query: 78 VLQ 80
V+Q
Sbjct: 1231 VVQ 1233
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 1478 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 1535
Query: 78 VLQ 80
V+Q
Sbjct: 1536 VVQ 1538
>gi|301775059|ref|XP_002922949.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like
[Ailuropoda melanoleuca]
Length = 3587
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2100 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2148
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2570 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2622
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 8 SSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
SSS+ S + G+S+P S+ R KR RT + QL+ +K+ F+ + P ++
Sbjct: 2873 SSSIADPSSPNPFGSSNPFKS-KSNDRPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQEC 2931
Query: 66 KQLAQKTGLSKRVLQ 80
+ L + GL KRV+Q
Sbjct: 2932 EMLGNEIGLPKRVVQ 2946
>gi|296480588|tpg|DAA22703.1| TPA: zinc finger homeobox 4 [Bos taurus]
Length = 3586
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2094 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2142
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2565 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2617
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2897 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2941
>gi|148673271|gb|EDL05218.1| zinc finger homeodomain 4 [Mus musculus]
Length = 3550
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2066 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2114
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2535 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2587
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2866 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2910
>gi|125656178|ref|NP_109633.2| zinc finger homeobox protein 4 [Mus musculus]
Length = 3581
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2097 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2145
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2566 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2618
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2897 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2941
>gi|109638254|dbj|BAE96598.1| zinc-finger homeodomain protein 4 [Homo sapiens]
Length = 3599
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2109 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2157
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2581 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2633
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2913 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2957
>gi|402878530|ref|XP_003902933.1| PREDICTED: zinc finger homeobox protein 4 [Papio anubis]
Length = 3615
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2125 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2173
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2597 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2649
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2929 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2973
>gi|363730712|ref|XP_425925.3| PREDICTED: zinc finger homeobox protein 4 isoform 2 [Gallus gallus]
Length = 3469
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 1965 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2013
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 3 HSGDLSSSMESLSYESGAGNSSPGSGVHSHQ---RTKRMRTSFKHHQLRTMKSYFNINQN 59
H +S SM+ + N S G +S + R KR+RT+ QL + + ++ N
Sbjct: 2409 HPATVSGSMKRKLDDKEDNNCSEKEGGNSGEDQHRDKRLRTTITPEQLEILYEKYLLDSN 2468
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
P K L +A++ GL KRV+Q
Sbjct: 2469 PTRKMLDHIAREVGLKKRVVQ 2489
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2771 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2815
>gi|332240795|ref|XP_003269574.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4
[Nomascus leucogenys]
Length = 3375
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 1886 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 1934
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2358 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2410
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2690 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2734
>gi|291167749|ref|NP_078997.4| zinc finger homeobox protein 4 [Homo sapiens]
gi|119607457|gb|EAW87051.1| zinc finger homeodomain 4, isoform CRA_c [Homo sapiens]
Length = 3616
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2126 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2174
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2598 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2650
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2930 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2974
>gi|397522592|ref|XP_003831345.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4 [Pan
paniscus]
Length = 3616
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2126 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2174
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2598 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2650
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2930 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2974
>gi|355779769|gb|EHH64245.1| hypothetical protein EGM_17418 [Macaca fascicularis]
Length = 3600
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2110 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2158
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2582 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2634
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2914 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2958
>gi|355698040|gb|EHH28588.1| hypothetical protein EGK_19059 [Macaca mulatta]
Length = 3600
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2110 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2158
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2582 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2634
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2914 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2958
>gi|119607455|gb|EAW87049.1| zinc finger homeodomain 4, isoform CRA_a [Homo sapiens]
Length = 3571
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2081 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2129
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2553 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2605
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2885 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2929
>gi|426359952|ref|XP_004047218.1| PREDICTED: zinc finger homeobox protein 4 [Gorilla gorilla gorilla]
Length = 3616
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2126 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2174
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2598 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2650
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2930 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2974
>gi|300794701|ref|NP_001178631.1| zinc finger homeobox protein 4 [Rattus norvegicus]
Length = 3593
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2105 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2153
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2574 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2626
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2905 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2949
>gi|74762449|sp|Q86UP3.1|ZFHX4_HUMAN RecName: Full=Zinc finger homeobox protein 4; AltName: Full=Zinc
finger homeodomain protein 4; Short=ZFH-4
gi|30171819|gb|AAP20225.1| zinc finger homeodomain 4 protein [Homo sapiens]
Length = 3567
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2081 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2129
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2553 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2605
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2885 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2929
>gi|47230417|emb|CAF99610.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2458
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P+ +K++A K+GL ++V++
Sbjct: 1140 QQQNKRPRTRITDDQLRILRQYFDINNSPNEDQIKEMADKSGLPQKVIK 1188
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 7 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
L +E S S N S SG QR KR+RT+ QL + + ++ NP K L+
Sbjct: 1607 LKRKLEEKSCTSPGENDSTNSG-EEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLE 1665
Query: 67 QLAQKTGLSKRVLQ 80
+A + GL KRV+Q
Sbjct: 1666 HIAHEVGLKKRVVQ 1679
>gi|403299979|ref|XP_003940747.1| PREDICTED: zinc finger homeobox protein 4 [Saimiri boliviensis
boliviensis]
Length = 3603
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2113 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2161
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2585 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2637
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 8 SSSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
+SS+ S + G+S+P SH+R KR RT + QL+ +K+ F+ + P ++
Sbjct: 2888 TSSIADPSSPNPFGSSNPFKS-KSHERPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQEC 2946
Query: 66 KQLAQKTGLSKRVLQ 80
+ L + GL KRV+Q
Sbjct: 2947 EMLGNEIGLPKRVVQ 2961
>gi|334325482|ref|XP_001377828.2| PREDICTED: zinc finger homeobox protein 4 [Monodelphis domestica]
Length = 3635
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2126 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2174
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2594 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2646
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2926 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2970
>gi|395510976|ref|XP_003759741.1| PREDICTED: zinc finger homeobox protein 4 [Sarcophilus harrisii]
Length = 3638
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2138 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2186
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2606 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2658
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2938 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2982
>gi|354487707|ref|XP_003506013.1| PREDICTED: zinc finger homeobox protein 4-like, partial [Cricetulus
griseus]
Length = 2433
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 1088 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 1136
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
E GNS G H R KR+RT+ QL + + ++ NP K L +A++ GL K
Sbjct: 1551 EKEGGNS--GEDQH---RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKK 1605
Query: 77 RVLQ 80
RV+Q
Sbjct: 1606 RVVQ 1609
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 1877 KRFRTLMSNLQLKVLKACFSDYRTPTMQECEMLGSEIGLPKRVVQ 1921
>gi|410041891|ref|XP_003954433.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4 [Pan
troglodytes]
Length = 2647
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2130 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2178
>gi|390475729|ref|XP_002807675.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like
[Callithrix jacchus]
Length = 3606
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2126 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2174
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2602 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2654
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2934 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2978
>gi|444722360|gb|ELW63058.1| Zinc finger homeobox protein 3 [Tupaia chinensis]
Length = 1446
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 441 QQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 489
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+ G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KR
Sbjct: 922 ASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKR 981
Query: 78 VLQ 80
V+Q
Sbjct: 982 VVQ 984
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 1229 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 1286
Query: 78 VLQ 80
V+Q
Sbjct: 1287 VVQ 1289
>gi|351710153|gb|EHB13072.1| Zinc finger homeobox protein 4 [Heterocephalus glaber]
Length = 2426
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 993 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 1041
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
E GNS G H R KR+RT+ QL + + ++ NP K L +A++ GL K
Sbjct: 1457 EKEGGNS--GEDQH---RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKK 1511
Query: 77 RVLQ 80
RV+Q
Sbjct: 1512 RVVQ 1515
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 1795 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 1839
>gi|81917513|sp|Q9JJN2.1|ZFHX4_MOUSE RecName: Full=Zinc finger homeobox protein 4; AltName: Full=Zinc
finger homeodomain protein 4; Short=ZFH-4
gi|9663936|dbj|BAB03600.1| zinc-finger homeodomain protein 4 [Mus musculus]
Length = 3550
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2066 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVVK 2114
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2535 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2587
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2866 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2910
>gi|431891860|gb|ELK02394.1| Zinc finger homeobox protein 4 [Pteropus alecto]
Length = 2407
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 1391 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 1439
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
E GNS G H R KR+RT+ QL + + ++ NP K L +A++ GL K
Sbjct: 1853 EKEGGNS--GEDQH---RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKK 1907
Query: 77 RVLQ 80
RV+Q
Sbjct: 1908 RVVQ 1911
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2192 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2236
>gi|432097009|gb|ELK27508.1| Zinc finger homeobox protein 4 [Myotis davidii]
Length = 2700
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 36/49 (73%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 1447 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQVQEMAEKSGLSQKVIK 1495
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G G R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 1683 GPGGEDQHRDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 1737
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F + P ++ + L + GL KRV+Q
Sbjct: 2017 KRFRTQMSNLQLKVLKACFGDYRTPTMQECEMLGNEIGLPKRVVQ 2061
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 8 SSSMESLSYES-GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
S ESL S GAG +P G H+R KR RT Q R K+ F ++ P K +
Sbjct: 168 SDDEESLCKSSQGAGKGTPEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 226
Query: 67 QLAQKTGLSKRVLQ 80
LA +TGLS RV+Q
Sbjct: 227 TLAAETGLSVRVVQ 240
>gi|443701940|gb|ELU00130.1| hypothetical protein CAPTEDRAFT_97456 [Capitella teleta]
Length = 269
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 9 SSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQL 68
SS E + ES G+ +PGS + R RT K QL+ + + F N P K+ + L
Sbjct: 163 SSAEQDAPESNGGDGTPGS------KKSRPRTVIKDDQLKVLHAAFTANHLPTKKEREDL 216
Query: 69 AQKTGLSKRVLQ 80
++TGLS RV+Q
Sbjct: 217 VERTGLSMRVIQ 228
>gi|327285486|ref|XP_003227464.1| PREDICTED: zinc finger homeobox protein 3-like [Anolis carolinensis]
Length = 3731
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 2187 KRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 2231
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 12 ESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
E S G +SS +G QR KR+RT+ QL + + ++ NP K L +A +
Sbjct: 2673 EKASASPGENDSS--TGGEEPQRDKRLRTTITPEQLEVLYQKYLLDSNPTRKMLDHIAHE 2730
Query: 72 TGLSKRVLQ 80
GL KRV+Q
Sbjct: 2731 VGLKKRVVQ 2739
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG +P G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGAPEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
+ GAG P H+H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 174 DPGAGRQ-PAPRPHAHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 232
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 233 LSPRVIR 239
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 14 LSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQ 70
LS E G+G P H H ++T R+RT QL T+++ + N PDA +QL +
Sbjct: 144 LSAEPGSGRQ-PSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE 202
Query: 71 KTGLSKRVLQ 80
TGLS RV++
Sbjct: 203 MTGLSPRVIR 212
>gi|268563216|ref|XP_002638784.1| Hypothetical protein CBG05137 [Caenorhabditis briggsae]
Length = 1214
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YFNIN +P +K+++QK+GL ++V++
Sbjct: 481 KRARTRITDDQLKVLRQYFNINNSPSEAQIKEMSQKSGLPEKVIK 525
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ SP S +KR RT Q++ MKS FN + P + + L ++ GL KR
Sbjct: 931 SGSECRSPASS------SKRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLGKEVGLHKR 984
Query: 78 VLQ 80
V+Q
Sbjct: 985 VVQ 987
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 15 SYESGAGN-----SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
++ + A N S+P S + + RT F QLRT++ +F+ P DL+ L+
Sbjct: 637 TFMAAAANPMTNPSTPSSCNTTSSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALS 696
Query: 70 QKTGLSKRVL 79
+K LS RV+
Sbjct: 697 KKLQLSPRVI 706
>gi|440808054|gb|AGC24170.1| islet, partial [Lymnaea stagnalis]
Length = 189
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
+G L ES +SG G S S +T R+RT QL T+++ +N N PDA
Sbjct: 114 TGSLGKDTES--KKSGRGEKSSRGSHKSDHKTTRVRTVLNEKQLHTLRTCYNANPRPDAL 171
Query: 64 DLKQLAQKTGLSKRVLQ 80
+QL + TGLS RV++
Sbjct: 172 MKEQLTEMTGLSPRVIR 188
>gi|268563220|ref|XP_002638785.1| Hypothetical protein CBG05139 [Caenorhabditis briggsae]
Length = 982
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YFNIN +P +K+++QK+GL ++V++
Sbjct: 249 KRARTRITDDQLKVLRQYFNINNSPSEAQIKEMSQKSGLPEKVIK 293
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ SP S +KR RT Q++ MKS FN + P + + L ++ GL KR
Sbjct: 699 SGSECRSPASS------SKRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLGKEVGLHKR 752
Query: 78 VLQ 80
V+Q
Sbjct: 753 VVQ 755
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 15 SYESGAGN-----SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
++ + A N S+P S + + RT F QLRT++ +F+ P DL+ L+
Sbjct: 405 TFMAAAANPMTNPSTPSSCNTTSSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALS 464
Query: 70 QKTGLSKRVL 79
+K LS RV+
Sbjct: 465 KKLQLSPRVI 474
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2 LHSGDLSSSMESLSYESGAGNSSPGSGV----HSH---QRTKRMRTSFKHHQLRTMKSYF 54
L +GD S + AG PGS H H ++T R+RT QL T+++ +
Sbjct: 141 LGAGDPLSPLHPARPLQMAGTPLPGSXXXLRPHVHKQPEKTTRVRTVLNEKQLHTLRTCY 200
Query: 55 NINQNPDAKDLKQLAQKTGLSKRVLQ 80
N PDA +QL + TGLS RV++
Sbjct: 201 AANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 24 SPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+P H H ++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 167 TPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|221104339|ref|XP_002156835.1| PREDICTED: LIM/homeobox protein Awh-like [Hydra magnipapillata]
Length = 203
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQ-------RTKRMRTSFKHHQLRTMKSYFNINQ 58
+L +S L S +SP V Q + KR+RTSF Q+ +++ F+++
Sbjct: 78 ELPASCPVLLTNSSVMENSPELIVDEDQMWIKHENKNKRVRTSFTDEQVLILQANFDLDA 137
Query: 59 NPDAKDLKQLAQKTGLSKRVLQ 80
NPD+ +L+++A L KRV Q
Sbjct: 138 NPDSNELERIAADVSLPKRVTQ 159
>gi|301620545|ref|XP_002939633.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 4-like
[Xenopus (Silurana) tropicalis]
Length = 3576
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++YF+IN +P+ ++++A K+GLS +V++
Sbjct: 2104 HSQFKRPRTRITDDQLKILRTYFDINNSPNEDQIQEMADKSGLSLKVIK 2152
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2563 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2615
>gi|159164034|pdb|2DA1|A Chain A, Solution Structure Of The First Homeobox Domain Of At-
Binding Transcription Factor 1 (Atbf1)
Length = 70
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR ++ YF+IN +P + +K++A K+GL ++V++
Sbjct: 8 KRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIK 52
>gi|380807623|gb|AFE75687.1| zinc finger homeobox protein 4, partial [Macaca mulatta]
Length = 133
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 35/48 (72%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
H + KR RT QL+ +++YF+IN +P + ++++A+K+GLS++V+
Sbjct: 73 HSQFKRPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVI 120
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
SG S S +SL G G S P G + R+RT QL T+++ +N N PDA
Sbjct: 221 SGSESGSHKSLR---GKGPSGPSDG-----KPTRVRTVLNEKQLHTLRTCYNANPRPDAL 272
Query: 64 DLKQLAQKTGLSKRVLQ 80
+QL + TGLS RV++
Sbjct: 273 MKEQLVEMTGLSPRVIR 289
>gi|312085361|ref|XP_003144649.1| hypothetical protein LOAG_09072 [Loa loa]
Length = 171
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
E GN+ + ++R +R RTSF QL M++ FN N PD + +++A KT LS+
Sbjct: 25 EKKNGNAPEDANFEKNRRVRRNRTSFSSEQLEIMEAAFNANTYPDQDERERIAVKTSLSE 84
>gi|126272190|ref|XP_001362509.1| PREDICTED: insulin gene enhancer protein ISL-2 [Monodelphis
domestica]
Length = 359
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 23 SSPGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
S PGSG H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 170 SEPGSGRQPSLRAHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 229
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 230 LSPRVIR 236
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 9 SSMESLSYES--GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
S ES S++S G G S P G + R+RT QL T+++ +N N PDA +
Sbjct: 178 SGSESGSHKSMRGKGPSGPSDG-----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKE 232
Query: 67 QLAQKTGLSKRVLQ 80
QL + TGLS RV++
Sbjct: 233 QLVEMTGLSPRVIR 246
>gi|308220144|gb|ADO22644.1| TALE class homeobox transcription factor Isl [Mnemiopsis leidyi]
Length = 236
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 24 SPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S +G Q+T R+RT QLR +++ +N N PDA +Q+ + TGLS RV++
Sbjct: 63 STNTGSSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIR 119
>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
Length = 438
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 9 SSMESLSYES--GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
S ES S++S G G + P G + R+RT QL+T+++ +N N PDA +
Sbjct: 208 SGSESGSHKSMRGKGPTGPSDG-----KPTRVRTVLNEKQLQTLRTCYNANPRPDALMKE 262
Query: 67 QLAQKTGLSKRVLQ 80
QL + TGLS RV++
Sbjct: 263 QLVEMTGLSPRVIR 276
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 24 SPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S +G Q+T R+RT QLR +++ +N N PDA +Q+ + TGLS RV++
Sbjct: 148 STNTGSSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIR 204
>gi|357932917|emb|CBH76626.1| LIM/homeobox protein Lhx9, partial [Oreochromis mossambicus]
Length = 172
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/21 (95%), Positives = 21/21 (100%)
Query: 33 QRTKRMRTSFKHHQLRTMKSY 53
Q+TKRMRTSFKHHQLRTMKSY
Sbjct: 152 QKTKRMRTSFKHHQLRTMKSY 172
>gi|189531420|ref|XP_692222.3| PREDICTED: zinc finger homeobox protein 3 [Danio rerio]
Length = 3349
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q++KR RT QLR ++ YF+IN +P+ + ++A K+GL +V++
Sbjct: 1954 QQSKRPRTRITDDQLRVLRQYFDINNSPNEDQIHEMANKSGLPHKVIK 2001
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 7 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
L +E + S N +G H R KRMRT+ QL + + ++ NP K L
Sbjct: 2411 LKRKLEEKAGSSSVENDWENNGDEPH-RDKRMRTTITPEQLEVLYQKYLLDSNPTRKMLD 2469
Query: 67 QLAQKTGLSKRVLQ 80
++ + GL KRV+Q
Sbjct: 2470 HISNEVGLKKRVVQ 2483
>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRIRTVLTEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVR 236
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|348500124|ref|XP_003437623.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oreochromis
niloticus]
Length = 360
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 190 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 237
>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b; Short=Islet-2B;
AltName: Full=Insulin gene enhancer protein isl-3;
Short=Islet-3
gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
Length = 358
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
Length = 363
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMREQLVEMTGLSPRVIR 236
>gi|410912158|ref|XP_003969557.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Takifugu
rubripes]
Length = 359
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|47217860|emb|CAG02353.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 38 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 85
>gi|18858907|ref|NP_571045.1| insulin gene enhancer protein isl-2a [Danio rerio]
gi|1708561|sp|P53406.1|ISL2A_DANRE RecName: Full=Insulin gene enhancer protein isl-2a; Short=Islet-2A;
AltName: Full=Insulin gene enhancer protein isl-2;
Short=Islet-2
gi|871001|emb|CAA61283.1| Islet-2 protein [Danio rerio]
gi|1037166|dbj|BAA07484.1| zfIsl-2 [Danio rerio]
gi|190336908|gb|AAI62631.1| Islet2a [Danio rerio]
gi|190339440|gb|AAI62833.1| Islet2a [Danio rerio]
Length = 359
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|395541258|ref|XP_003772563.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 365
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT+F QL+ M+ ++ NP+A+ L++L+++TGLS++ +Q
Sbjct: 235 KRARTNFTVDQLQIMQGHYTQENNPNAQALQKLSERTGLSRKTVQ 279
>gi|348505840|ref|XP_003440468.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oreochromis
niloticus]
Length = 359
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|487805|gb|AAA80274.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 119 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 166
>gi|595301|gb|AAA80275.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 119 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 166
>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
rubripes]
Length = 359
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRIRTVLTEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVR 236
>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A; Short=Islet-2A
Length = 358
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 188 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 235
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix jacchus]
Length = 359
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 23 SSPGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
S PGSG H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 170 SDPGSGRQPTLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 229
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 230 LSPRVIR 236
>gi|1708558|sp|P50212.1|ISL2B_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2B; Short=Islet-2B
gi|64209|emb|CAA46102.1| isl-1 [Oncorhynchus tshawytscha]
gi|1094403|prf||2106150A LIM domain homeobox protein
Length = 340
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 170 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 217
>gi|60360618|dbj|BAD90323.1| mKIAA4228 protein [Mus musculus]
Length = 1123
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + G+G QR KR+RT+ QL + + ++ NP K L +A + GL KRV+Q
Sbjct: 33 GENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQ 92
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+SG G PG KR RT + QL+ +KS FN + P + + L GL K
Sbjct: 341 KSGDGGDRPGQ--------KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPK 392
Query: 77 RVLQ 80
RV+Q
Sbjct: 393 RVVQ 396
>gi|432861700|ref|XP_004069695.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oryzias
latipes]
Length = 358
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 188 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 235
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 14 LSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQ 70
L ++G+G P H H ++T R+RT QL T+++ + N PDA +QL +
Sbjct: 169 LPADAGSGRQ-PALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVE 227
Query: 71 KTGLSKRVLQ 80
TGLS RV++
Sbjct: 228 MTGLSPRVIR 237
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++++ N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTWYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|383861767|ref|XP_003706356.1| PREDICTED: zinc finger homeobox protein 4-like [Megachile rotundata]
Length = 3064
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 16 YESGAGNSSPGSGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
+E G G S + HS Q + KR+RT+ QL + + + NP K L+ +A++ GL
Sbjct: 2550 FEEGTGGESRSNSEHSEQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLETIAREVGL 2609
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2610 KKRVVQ 2615
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 18 SGAGNSSPGSGVHSHQRT-KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
S AG + G+G + Q++ KR RT Q++ MKS F+ + P + + L ++ GL K
Sbjct: 2839 STAGPPATGTGSGTGQQSGKRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPK 2898
Query: 77 RVLQ 80
RV+Q
Sbjct: 2899 RVVQ 2902
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +A ++GL +V++
Sbjct: 1998 KRARTRITDEQLKILRAHFDINNSPGEEQILDMAAQSGLPPKVIK 2042
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2259 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2299
>gi|432852914|ref|XP_004067448.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oryzias
latipes]
Length = 284
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 136 EKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 183
>gi|281349042|gb|EFB24626.1| hypothetical protein PANDA_015045 [Ailuropoda melanoleuca]
Length = 329
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 23 SSPGSG--------VHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
+ PGSG VH ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 147 ADPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 206
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 207 LSPRVIR 213
>gi|308485834|ref|XP_003105115.1| hypothetical protein CRE_20800 [Caenorhabditis remanei]
gi|308257060|gb|EFP01013.1| hypothetical protein CRE_20800 [Caenorhabditis remanei]
Length = 1613
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YFNIN +P +K+++ K+GL ++V++
Sbjct: 847 KRARTRITDDQLKVLRQYFNINNSPSESQIKEMSHKSGLPEKVIK 891
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 25 PGSG--VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
PGSG S KR RT Q++ MKS FN + P + + L ++ GL KRV+Q
Sbjct: 1329 PGSGSECRSPASNKRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLGKEVGLHKRVVQ 1386
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 11 MESLSYESGAGN----SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
++ S+ + A N S+P S + + RT F QLRT++ +F+ P DL+
Sbjct: 1017 FDATSFMAAATNPMTPSTPSSCNTTSSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLE 1076
Query: 67 QLAQKTGLSKRVL 79
L++K LS RV+
Sbjct: 1077 ALSKKLQLSPRVI 1089
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
SG S + R+RT QL T+++ +N N PDA +QL + TGLS RV+
Sbjct: 191 SGHKSEHKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTGLSPRVI 243
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 23 SSPGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
+ PGSG H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 171 ADPGSGRQPALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 230
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 231 LSPRVIR 237
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAK 63
SGD+S + ES S + G G + + + RT+ K QL +K+ F P
Sbjct: 270 SGDVSDTEESRSADGKVGKD--GEAAPTGTKRRGPRTTIKAKQLEVLKAAFAATPKPTRH 327
Query: 64 DLKQLAQKTGLSKRVLQ 80
+QLAQ+TGL+ RV+Q
Sbjct: 328 IREQLAQETGLNMRVIQ 344
>gi|427780251|gb|JAA55577.1| Putative zinc finger homeobox protein 4 [Rhipicephalus pulchellus]
Length = 3163
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR +++YF+IN +P + L ++++K+GL +V++
Sbjct: 2106 KRARTRISDEQLRILRAYFDINNSPTEEQLMEMSEKSGLPLKVIK 2150
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG P V KR RT QL+ MKS F + P + + L ++ GL KRV
Sbjct: 2864 GAGGQQPSRPVSG--SGKRFRTQMTTVQLKVMKSIFADYKTPSMAECEMLGREIGLPKRV 2921
Query: 79 LQ 80
+Q
Sbjct: 2922 VQ 2923
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + + NP K L+ +A+ GL KRV+Q
Sbjct: 2616 RDKRLRTTILPEQLDYLYQKYQMESNPSRKMLENIARDVGLKKRVVQ 2662
>gi|341882195|gb|EGT38130.1| hypothetical protein CAEBREN_29632 [Caenorhabditis brenneri]
Length = 1240
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YFNIN +P +K+++ K+GL ++V++
Sbjct: 497 KRARTRITDDQLKVLRQYFNINNSPSESQIKEMSHKSGLPEKVIK 541
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
S+ + A S+P S + + RT F QLRT++ +F+ P DL+ L++K L
Sbjct: 656 SFMTAATPSTPSSCNTTSSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQL 715
Query: 75 SKRVL 79
S RV+
Sbjct: 716 SPRVI 720
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 25 PGSG---VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P SG S KR RT Q++ MK FN + P + + L ++ GL KRV+Q
Sbjct: 954 PTSGSSECRSPASNKRFRTHLTPMQVQMMKCVFNEYKTPSMAECELLGKEVGLHKRVVQ 1012
>gi|341880636|gb|EGT36571.1| hypothetical protein CAEBREN_07903 [Caenorhabditis brenneri]
Length = 1239
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YFNIN +P +K+++ K+GL ++V++
Sbjct: 496 KRARTRITDDQLKVLRQYFNINNSPSESQIKEMSHKSGLPEKVIK 540
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
S+ + A S+P S + + RT F QLRT++ +F+ P DL+ L++K L
Sbjct: 655 SFMAAATPSTPSSCNTTSSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQL 714
Query: 75 SKRVL 79
S RV+
Sbjct: 715 SPRVI 719
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 25 PGSG---VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P SG S KR RT Q++ MK FN + P + + L ++ GL KRV+Q
Sbjct: 953 PTSGSSECRSPASNKRFRTHLTPMQVQMMKCVFNEYKTPSMAECELLGKEVGLHKRVVQ 1011
>gi|427782453|gb|JAA56678.1| Putative zinc finger homeobox protein 4 [Rhipicephalus pulchellus]
Length = 3111
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR +++YF+IN +P + L ++++K+GL +V++
Sbjct: 2125 KRARTRISDEQLRILRAYFDINNSPTEEQLMEMSEKSGLPLKVIK 2169
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG P V KR RT QL+ MKS F + P + + L ++ GL KRV
Sbjct: 2883 GAGGQQPSRPVSG--SGKRFRTQMTTVQLKVMKSIFADYKTPSMAECEMLGREIGLPKRV 2940
Query: 79 LQ 80
+Q
Sbjct: 2941 VQ 2942
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + + NP K L+ +A+ GL KRV+Q
Sbjct: 2635 RDKRLRTTILPEQLDYLYQKYQMESNPSRKMLENIARDVGLKKRVVQ 2681
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|344284256|ref|XP_003413884.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2-like [Loxodonta africana]
Length = 356
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
+ GAG P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 168 DPGAGRQ-PSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 226
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 227 LSPRVIR 233
>gi|341925954|dbj|BAK53866.1| insulin gene enhancer protein isl-1 [Dugesia japonica]
Length = 517
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 304 QKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 351
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 179 RPTRVRTVLNEKQLHTLRTCYNANPRPDAMMKEQLVEMTGLSPRVIR 225
>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
Length = 383
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+H +T R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 180 THHKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTNLSPRVIR 229
>gi|427797591|gb|JAA64247.1| Putative zinc finger homeobox protein 4, partial [Rhipicephalus
pulchellus]
Length = 2462
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR +++YF+IN +P + L ++++K+GL +V++
Sbjct: 1405 KRARTRISDEQLRILRAYFDINNSPTEEQLMEMSEKSGLPLKVIK 1449
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG P V KR RT QL+ MKS F + P + + L ++ GL KRV
Sbjct: 2163 GAGGQQPSRPVSG--SGKRFRTQMTTVQLKVMKSIFADYKTPSMAECEMLGREIGLPKRV 2220
Query: 79 LQ 80
+Q
Sbjct: 2221 VQ 2222
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + + NP K L+ +A+ GL KRV+Q
Sbjct: 1915 RDKRLRTTILPEQLDYLYQKYQMESNPSRKMLENIARDVGLKKRVVQ 1961
>gi|427791099|gb|JAA61001.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 2110
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR +++YF+IN +P + L ++++K+GL +V++
Sbjct: 1164 KRARTRISDEQLRILRAYFDINNSPTEEQLMEMSEKSGLPLKVIK 1208
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG P V KR RT QL+ MKS F + P + + L ++ GL KRV
Sbjct: 1922 GAGGQQPSRPVSG--SGKRFRTQMTTVQLKVMKSIFADYKTPSMAECEMLGREIGLPKRV 1979
Query: 79 LQ 80
+Q
Sbjct: 1980 VQ 1981
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + + NP K L+ +A+ GL KRV+Q
Sbjct: 1674 RDKRLRTTILPEQLDYLYQKYQMESNPSRKMLENIARDVGLKKRVVQ 1720
>gi|25395229|pir||H87721 protein ZC123.2 [imported] - Caenorhabditis elegans
Length = 1048
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YFNIN +P +K+++QK L ++V++
Sbjct: 320 KRARTRITDDQLKVLRQYFNINNSPSEAQIKEMSQKASLPEKVIK 364
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
NS+ GS S KR RT Q++ MKS FN + P + + L ++ GL KRV+Q
Sbjct: 788 ANSTSGSECRSPASNKRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLGKEVGLHKRVVQ 847
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 23 SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
S+P S R + RT F QLRT++ +F+ P DL+ L++K LS RV+
Sbjct: 484 STPSCNTSSSGR-RANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLSPRVI 539
>gi|427797593|gb|JAA64248.1| Putative zinc finger homeobox protein 4, partial [Rhipicephalus
pulchellus]
Length = 2462
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR +++YF+IN +P + L ++++K+GL +V++
Sbjct: 1405 KRARTRISDEQLRILRAYFDINNSPTEEQLMEMSEKSGLPLKVIK 1449
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 19 GAGNSSP-----GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
GAG P GSG KR RT QL+ MKS F + P + + L ++ G
Sbjct: 2163 GAGGQQPSRPVSGSG-------KRFRTQMTTVQLKVMKSIFADYKTPSMAECEMLGREIG 2215
Query: 74 LSKRVLQ 80
L KRV+Q
Sbjct: 2216 LPKRVVQ 2222
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + + NP K L+ +A+ GL KRV+Q
Sbjct: 1915 RDKRLRTTILPEQLDYLYQKYQMESNPSRKMLENIARDVGLKKRVVQ 1961
>gi|327269681|ref|XP_003219621.1| PREDICTED: zinc finger homeobox protein 4-like [Anolis carolinensis]
Length = 3498
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 34/48 (70%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q + RT QL+ +++YF+IN +P + ++++A+K+GLS++V++
Sbjct: 2016 QPVQHPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIK 2063
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 3 HSGDLSSSMESLSYESGAGNSSPGSGVHSHQ---RTKRMRTSFKHHQLRTMKSYFNINQN 59
H+ +S S++ + N S G +S + R KR+RT+ QL + + ++ N
Sbjct: 2460 HTASISGSLKRKLDDKDDNNCSEKEGGNSGEDQHRDKRLRTTITPEQLEILYEKYLLDSN 2519
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
P K L +A++ GL KRV+Q
Sbjct: 2520 PTRKMLDHIAREVGLKKRVVQ 2540
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2818 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2862
>gi|392884698|ref|NP_490781.2| Protein ZFH-2 [Caenorhabditis elegans]
gi|351051468|emb|CCD73562.1| Protein ZFH-2 [Caenorhabditis elegans]
Length = 1565
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YFNIN +P +K+++QK L ++V++
Sbjct: 806 KRARTRITDDQLKVLRQYFNINNSPSEAQIKEMSQKASLPEKVIK 850
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 21 GNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
NS+ GS S KR RT Q++ MKS FN + P + + L ++ GL KRV+Q
Sbjct: 1274 ANSTSGSECRSPASNKRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLGKEVGLHKRVVQ 1333
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 23 SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
S+P S R + RT F QLRT++ +F+ P DL+ L++K LS RV+
Sbjct: 970 STPSCNTSSSGR-RANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLSPRVI 1025
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Ovis aries]
Length = 366
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 25 PGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
PGSG H H ++T R+RT QL T+++ + N PDA +QL + TGLS
Sbjct: 172 PGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLS 231
Query: 76 KRVLQ 80
RV++
Sbjct: 232 PRVIR 236
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 25 PGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
PGSG H H ++T R+RT QL T+++ + N PDA +QL + TGLS
Sbjct: 172 PGSGRQPALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLS 231
Query: 76 KRVLQ 80
RV++
Sbjct: 232 PRVIR 236
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 25 PGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
PGSG H H ++T R+RT QL T+++ + N PDA +QL + TGLS
Sbjct: 172 PGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLS 231
Query: 76 KRVLQ 80
RV++
Sbjct: 232 PRVIR 236
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|241335261|ref|XP_002408391.1| conserved hypothetical protein [Ixodes scapularis]
gi|215497330|gb|EEC06824.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2453
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR +++YF+IN +P + L ++++K+GL +V++
Sbjct: 1560 KRARTRISDEQLRILRAYFDINNSPTEEQLMEMSEKSGLPLKVIK 1604
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + + NP K L+ +A+ GL KRV+Q
Sbjct: 1955 RDKRLRTTILPEQLDYLYQKYQMESNPSRKMLENIARDVGLKKRVVQ 2001
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ MKS F + P + + L ++ GL KRV+Q
Sbjct: 2218 KRFRTQMTTVQLKVMKSIFADYKTPSMAECEMLGREIGLPKRVVQ 2262
>gi|397496393|ref|XP_003819022.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Pan paniscus]
Length = 357
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
++G+G P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 169 DAGSGRQ-PALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 227
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 228 LSPRVIR 234
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
++G+G P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 171 DAGSGRQ-PSLRTHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 229
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 230 LSPRVIR 236
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
++G+G P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 171 DAGSGRQ-PALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 229
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 230 LSPRVIR 236
>gi|345324971|ref|XP_001508423.2| PREDICTED: hypothetical protein LOC100077160 [Ornithorhynchus
anatinus]
Length = 352
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG S G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 108 GAGKGS-GEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 166
Query: 79 LQ 80
+Q
Sbjct: 167 VQ 168
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
++G+G P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 171 DAGSGRQ-PALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 229
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 230 LSPRVIR 236
>gi|344247658|gb|EGW03762.1| Insulin gene enhancer protein ISL-2 [Cricetulus griseus]
Length = 200
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 13 SLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
SL+ P H H ++T R+RT QL T+++ + N PDA +QL
Sbjct: 7 SLAPADAGSGRQPSLRTHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLV 66
Query: 70 QKTGLSKRVL 79
+ TGLS RV+
Sbjct: 67 EMTGLSPRVI 76
>gi|332220030|ref|XP_003259160.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Nomascus leucogenys]
Length = 368
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGTAEEG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
Length = 433
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 17 ESGAGNSSPGSG-VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
+SG+ SS G+ V S + R+RT QL T+++ + N PDA +QL + TGLS
Sbjct: 202 DSGSCRSSGGTNKVSSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLS 261
Query: 76 KRVLQ 80
RV++
Sbjct: 262 PRVIR 266
>gi|355692896|gb|EHH27499.1| Insulin gene enhancer protein ISL-2 [Macaca mulatta]
Length = 310
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
++G+G P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 122 DAGSGRQ-PALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 180
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 181 LSPRVIR 187
>gi|358332007|dbj|GAA50740.1| zinc finger protein 2 [Clonorchis sinensis]
Length = 1421
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SHQR R RT QL ++SYF+IN +P + + ++ KTGL +V++
Sbjct: 987 SHQR--RSRTRLSEPQLVILRSYFDINNSPSEEKIAEICAKTGLQAKVVK 1034
>gi|380028978|ref|XP_003698160.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Apis florea]
Length = 2991
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 16 YESGAGNSSPGSGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
++ G G S + HS Q + KR+RT+ QL + + + NP K L+ +A++ GL
Sbjct: 2483 FDEGTGGESRSNSEHSEQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLETIAREVGL 2542
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2543 KKRVVQ 2548
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +A ++GL +V++
Sbjct: 1927 KRARTRITDEQLKILRAHFDINNSPGEEQILDMAAQSGLPPKVIK 1971
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT Q++ MKS F+ + P + + L ++ GL KRV+Q
Sbjct: 2791 KRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRVVQ 2835
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2190 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2230
>gi|355778207|gb|EHH63243.1| Insulin gene enhancer protein ISL-2 [Macaca fascicularis]
Length = 294
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
++G+G P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 106 DAGSGRQ-PALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 164
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 165 LSPRVIR 171
>gi|395825137|ref|XP_003785798.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Otolemur
garnettii]
Length = 382
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGAAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|339252746|ref|XP_003371596.1| putative homeobox domain protein [Trichinella spiralis]
gi|316968127|gb|EFV52459.1| putative homeobox domain protein [Trichinella spiralis]
Length = 1388
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S Q KR RT QL+ ++ YF+IN +P + ++ +++K+GL ++V++
Sbjct: 499 STQTQKRARTRITDEQLKILREYFDINNSPSEEQVEVMSKKSGLPQKVIK 548
>gi|403272543|ref|XP_003928115.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403272545|ref|XP_003928116.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 382
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGTAEEG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|301780216|ref|XP_002925525.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Ailuropoda
melanoleuca]
Length = 540
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 23 SSPGSG--------VHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
+ PGSG VH ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 351 ADPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 410
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 411 LSPRVIR 417
>gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|291327513|ref|NP_001167540.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|109019319|ref|XP_001084612.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Macaca mulatta]
gi|109019321|ref|XP_001084727.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Macaca mulatta]
gi|114561083|ref|XP_001174539.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
troglodytes]
gi|114561085|ref|XP_001174542.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3 [Pan
troglodytes]
gi|296229940|ref|XP_002760489.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Callithrix
jacchus]
gi|397508364|ref|XP_003824628.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1 [Pan
paniscus]
gi|397508366|ref|XP_003824629.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
paniscus]
gi|402858034|ref|XP_003893535.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Papio anubis]
gi|402858036|ref|XP_003893536.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Papio anubis]
gi|426332555|ref|XP_004027869.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Gorilla gorilla gorilla]
gi|426332557|ref|XP_004027870.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Gorilla gorilla gorilla]
gi|27923801|sp|Q8TE12.1|LMX1A_HUMAN RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|19879681|gb|AAL82892.1| LIM homeobox transcription factor 1 alpha [Homo sapiens]
gi|119611150|gb|EAW90744.1| LIM homeobox transcription factor 1, alpha, isoform CRA_b [Homo
sapiens]
gi|182887815|gb|AAI60062.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|193785405|dbj|BAG54558.1| unnamed protein product [Homo sapiens]
gi|208966672|dbj|BAG73350.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|355558990|gb|EHH15770.1| hypothetical protein EGK_01906 [Macaca mulatta]
gi|355746154|gb|EHH50779.1| hypothetical protein EGM_01656 [Macaca fascicularis]
Length = 382
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGTAEEG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|402874959|ref|XP_003901290.1| PREDICTED: insulin gene enhancer protein ISL-2 [Papio anubis]
Length = 350
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 17 ESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
++G+G P H H ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 162 DAGSGRQ-PALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 220
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 221 LSPRVIR 227
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGAAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|358334202|dbj|GAA52638.1| LIM/homeobox protein Lhx5 [Clonorchis sinensis]
Length = 698
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 1 MLHSGDLS----SSMESLSYESGAGNSSPG--SGVHSHQRTKRM--RTSFKHHQLRTMKS 52
+L + DL SS S+ +SG G G SG + TKR RT+ K QL T+K+
Sbjct: 542 LLTACDLPASEGSSQASVGSDSGTGQCMGGQLSGCGTGAGTKRRGPRTTIKAKQLETLKA 601
Query: 53 YFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
F P + LAQ+TGLS RV+Q
Sbjct: 602 AFAATPKPTRHVRETLAQETGLSMRVIQ 629
>gi|431916082|gb|ELK16336.1| LIM homeobox transcription factor 1-alpha [Pteropus alecto]
Length = 374
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 172 GAGKGAAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 230
Query: 79 LQ 80
+Q
Sbjct: 231 VQ 232
>gi|360045045|emb|CCD82593.1| hypothetical protein Smp_171380 [Schistosoma mansoni]
Length = 577
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ ++S Q KR RT QL ++SYF+IN +P + + ++ KTGL ++V++
Sbjct: 358 NTSIYSLQ--KRSRTRLNETQLNILRSYFDINNSPSDEKINEICNKTGLQEKVVK 410
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis catus]
Length = 382
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGAAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|328782104|ref|XP_393785.4| PREDICTED: zinc finger homeobox protein 3-like [Apis mellifera]
Length = 3063
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 16 YESGAGNSSPGSGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
++ G G S + HS Q + KR+RT+ QL + + + NP K L+ +A++ GL
Sbjct: 2551 FDEGTGGESRSNSEHSEQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLETIAREVGL 2610
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2611 KKRVVQ 2616
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +A ++GL +V++
Sbjct: 1995 KRARTRITDEQLKILRAHFDINNSPGEEQILDMAAQSGLPPKVIK 2039
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT Q++ MKS F+ + P + + L ++ GL KRV+Q
Sbjct: 2859 KRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRVVQ 2903
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2257 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2297
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 25 PGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
PG+G H H ++T R+RT QL T+++ + N PDA +QL + TGLS
Sbjct: 172 PGAGRQASLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLS 231
Query: 76 KRVLQ 80
RV++
Sbjct: 232 PRVIR 236
>gi|344287033|ref|XP_003415260.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Loxodonta
africana]
Length = 382
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGAAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|354471494|ref|XP_003497977.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cricetulus
griseus]
Length = 391
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 13 SLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
SL+ P H H ++T R+RT QL T+++ + N PDA +QL
Sbjct: 198 SLAPADAGSGRQPSLRTHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLV 257
Query: 70 QKTGLSKRVLQ 80
+ TGLS RV++
Sbjct: 258 EMTGLSPRVIR 268
>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Acyrthosiphon pisum]
Length = 513
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 19 GAGNSSPGSGVH--SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
G GNS GS S + R+RT QL T+++ ++ N PDA +QL + TGLS
Sbjct: 305 GPGNSRLGSAGKGSSDGKPTRVRTVLNEKQLHTLRTCYSANPRPDALMKEQLVEMTGLSP 364
Query: 77 RVLQ 80
RV++
Sbjct: 365 RVIR 368
>gi|357614270|gb|EHJ68998.1| putative zinc finger protein [Danaus plexippus]
Length = 890
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ ++ + R R+RT+ Q +K +++IN P+ ++ K++AQ+ GL RV+Q
Sbjct: 558 ASINENDRKIRVRTALTEEQQMVLKRHYSINPRPNREEFKKIAQQIGLDNRVVQ 611
>gi|297662848|ref|XP_002809900.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Pongo abelii]
Length = 489
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 287 GAGKGTAEEG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 345
Query: 79 LQ 80
+Q
Sbjct: 346 VQ 347
>gi|340720919|ref|XP_003398876.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Bombus terrestris]
Length = 3074
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
E G+S P S + + KR+RT+ QL + + + NP K L+ +A++ GL K
Sbjct: 2565 EGAGGDSRPISEHNEQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLETIAREVGLKK 2624
Query: 77 RVLQ 80
RV+Q
Sbjct: 2625 RVVQ 2628
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 18 SGAGNSSPGSGVHSHQRT-KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
S AG G+G + Q + KR RT Q++ MKS F+ + P + + L ++ GL K
Sbjct: 2852 STAGPPVTGTGSGTGQSSGKRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPK 2911
Query: 77 RVLQ 80
RV+Q
Sbjct: 2912 RVVQ 2915
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +A ++GL +V++
Sbjct: 2007 KRARTRITDEQLKILRAHFDINNSPGEEQILDMAAQSGLPPKVIK 2051
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2269 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2309
>gi|297294254|ref|XP_001094225.2| PREDICTED: insulin gene enhancer protein ISL-1-like [Macaca
mulatta]
Length = 286
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNIN 57
++ SG S+ S P H H ++T R+RT QL T+++ + N
Sbjct: 81 LILSGQPSAHGASCPAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAAN 140
Query: 58 QNPDAKDLKQLAQKTGLSKRVLQ 80
PDA +QL + TGLS RV++
Sbjct: 141 PRPDALMKEQLVEMTGLSPRVIR 163
>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Acyrthosiphon pisum]
Length = 487
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 19 GAGNSSPGSGVH--SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
G GNS GS S + R+RT QL T+++ ++ N PDA +QL + TGLS
Sbjct: 279 GPGNSRLGSAGKGSSDGKPTRVRTVLNEKQLHTLRTCYSANPRPDALMKEQLVEMTGLSP 338
Query: 77 RVLQ 80
RV++
Sbjct: 339 RVIR 342
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGATEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|281348858|gb|EFB24442.1| hypothetical protein PANDA_002084 [Ailuropoda melanoleuca]
Length = 368
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 166 GAGKGATEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 224
Query: 79 LQ 80
+Q
Sbjct: 225 VQ 226
>gi|34733869|gb|AAQ81867.1| islet 2 [Ambystoma mexicanum]
Length = 361
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 30 HSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 185 HAHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 238
>gi|242009051|ref|XP_002425306.1| zfh4, putative [Pediculus humanus corporis]
gi|212509080|gb|EEB12568.1| zfh4, putative [Pediculus humanus corporis]
Length = 3234
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 2 LHSGDLSSSMESLSYESGAGNSSPGSGVHSH--QRTKRMRTSFKHHQLRTMKSYFNINQN 59
L+ D +S + Y + SP S S+ ++ KR RT + Q++ MKS F +
Sbjct: 2936 LNDDDSASETTEMFYYDDSNPVSPASSTQSNNQKQNKRFRTQMSNTQIKVMKSLFGDYKT 2995
Query: 60 PDAKDLKQLAQKTGLSKRVLQ 80
P + + L ++ GL KRV+Q
Sbjct: 2996 PTMSECEILGREIGLPKRVIQ 3016
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+ QL + + I NP K L+ +A++ GL KRV+Q
Sbjct: 2725 KDKRLRTTILPEQLDYLYQKYQIESNPSRKMLESIAREVGLKKRVVQ 2771
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 28/42 (66%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT QL+ ++++F+IN +P + + ++A ++GL +V++
Sbjct: 2107 RTRITDDQLKILRAHFDINNSPSEEQIHEMASQSGLPPKVIK 2148
>gi|256066019|ref|XP_002570471.1| Mitochondrial ribosomal protein VAR1 [Schistosoma mansoni]
Length = 342
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ ++S Q KR RT QL ++SYF+IN +P + + ++ KTGL ++V++
Sbjct: 154 NTSIYSLQ--KRSRTRLNETQLNILRSYFDINNSPSDEKINEICNKTGLQEKVVK 206
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 17 ESGAG-NSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
++G+G SS + VH ++T R+RT QL T+++ + N PDA +QL + TGL
Sbjct: 171 DAGSGRQSSLRTHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGL 230
Query: 75 SKRVLQ 80
S RV++
Sbjct: 231 SPRVIR 236
>gi|397485994|ref|XP_003814120.1| PREDICTED: homeobox protein goosecoid-2 [Pan paniscus]
Length = 190
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 8 SSSMESLSYESGAGNSSPGS-GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
+S +SL +G + PG+ G S +RT+R RT F QL+ +++ F NQ PD +
Sbjct: 83 ASGGQSLGAPAGGSGALPGAVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRE 142
Query: 67 QLAQKTGL 74
+LA + L
Sbjct: 143 RLAGRIRL 150
>gi|6851381|gb|AAF29536.1|AF220000_1 LIM homeobox protein 7, partial [Rattus norvegicus]
Length = 38
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 29/35 (82%)
Query: 46 QLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
QL+ M++ F + NPDA+ L++LA++TGLS+RV+Q
Sbjct: 3 QLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQ 37
>gi|356577835|ref|XP_003557027.1| PREDICTED: insulin gene enhancer protein isl-1-like, partial
[Glycine max]
Length = 289
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 31 SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S + R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 190 SDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 239
>gi|260447067|ref|NP_001159513.1| ISL LIM homeobox 2 [Xenopus (Silurana) tropicalis]
gi|257043811|gb|ACV33233.1| islet 2 [Xenopus (Silurana) tropicalis]
Length = 333
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 163 EKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 210
>gi|324499882|gb|ADY39960.1| Zinc finger homeobox protein 2 [Ascaris suum]
Length = 1963
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
V S KR RT QL+ ++ YF+IN +P K +K+++ K L ++V++
Sbjct: 1184 AVPSTSPAKRARTRITDEQLKILRQYFDINNSPSEKQIKEMSVKAQLPEKVIK 1236
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
AGN++ + + +KR RT Q+ MKS F + P + L + GL KRV
Sbjct: 1678 AAGNAAQSAVQRTAANSKRYRTHLTPLQVHVMKSVFAEYKTPSMSECDMLGAEIGLHKRV 1737
Query: 79 LQ 80
+Q
Sbjct: 1738 VQ 1739
>gi|355699337|gb|AES01094.1| LIM homeobox 6 [Mustela putorius furo]
Length = 120
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 42 FKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
F QL+ M++ F + NPDA+ L++LA TGLS+RV+Q
Sbjct: 1 FTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQ 39
>gi|354486854|ref|XP_003505592.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Cricetulus griseus]
Length = 382
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGASEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 178 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|348512054|ref|XP_003443558.1| PREDICTED: zinc finger homeobox protein 4-like [Oreochromis
niloticus]
Length = 3249
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 35/49 (71%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ +++ F+IN +P+ + ++++++K+GL ++V++
Sbjct: 1747 HSQFKRPRTRITDEQLKILRANFDINNSPNEEQIQEMSEKSGLPQKVIK 1795
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
E A + G+ R KR+RT+ QL + + ++ NP K L +A++ GL K
Sbjct: 2195 EESANDKDGGNSSEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKK 2254
Query: 77 RVLQ 80
RV+Q
Sbjct: 2255 RVVQ 2258
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 19 GAGN--SSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
GAGN S G G + R KR RT + QL+ +K+ F+ + P ++ + L + GL
Sbjct: 2509 GAGNPFSKSGKGSSAGDRPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGL 2568
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2569 PKRVVQ 2574
>gi|291410745|ref|XP_002721643.1| PREDICTED: ISL LIM homeobox 2 [Oryctolagus cuniculus]
Length = 359
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 25 PGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
PG G H H ++T R+RT QL T+++ + N PDA +QL + TGLS
Sbjct: 172 PGPGRQPTLRPHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLS 231
Query: 76 KRVLQ 80
RV++
Sbjct: 232 PRVIR 236
>gi|158187529|ref|NP_001099437.2| LIM homeobox transcription factor 1 alpha [Rattus norvegicus]
Length = 382
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGASEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1-alpha [Mus musculus]
gi|27923804|sp|Q9JKU8.1|LMX1A_MOUSE RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|7230571|gb|AAF43012.1|AF226662_1 lim homeodomain-containing transcription factor [Mus musculus]
gi|26336939|dbj|BAC32153.1| unnamed protein product [Mus musculus]
gi|80477081|gb|AAI09168.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
gi|80478204|gb|AAI09169.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 382
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGASEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|547859|sp|Q04650.1|LMX1A_MESAU RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein LMX1A; Short=LIM/homeobox
protein 1; Short=LMX-1
gi|587461|emb|CAA57163.1| lmx1.1 [Mesocricetus auratus]
Length = 382
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGTSEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|449268911|gb|EMC79740.1| LIM homeobox transcription factor 1-alpha [Columba livia]
Length = 343
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 9 SSMESLSYESGAGNSSPGSG---VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
+ ES+ E G S G G H+R+KR RT Q R K+ F ++ P K
Sbjct: 131 APTESVKSEDEDGGHSHGKGGEETKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVR 190
Query: 66 KQLAQKTGLSKRVLQ 80
+ LA +TGL+ RV+Q
Sbjct: 191 ETLAAETGLTVRVVQ 205
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 202 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 260
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri boliviensis
boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|296194639|ref|XP_002745038.1| PREDICTED: insulin gene enhancer protein ISL-1 [Callithrix jacchus]
Length = 348
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 167 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 225
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|345794823|ref|XP_544791.3| PREDICTED: uncharacterized protein LOC487667 [Canis lupus
familiaris]
Length = 387
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 123 EKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 170
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 248 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 294
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 165 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 223
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|348020109|gb|AEP43996.1| POU domain class 6 transcription factor [Craspedacusta sowerbyi]
Length = 481
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
+ +R RTSF L + YFN NQ P ++L+ +AQKTGL
Sbjct: 145 KKRRKRTSFSPDLLDVLLDYFNKNQKPTPEELQMIAQKTGL 185
>gi|344240688|gb|EGV96791.1| Insulin gene enhancer protein ISL-1 [Cricetulus griseus]
Length = 257
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 76 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 134
>gi|410960782|ref|XP_003986966.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Felis catus]
Length = 354
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 184 EKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 231
>gi|148707230|gb|EDL39177.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 352
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 8 SSSMESLSYES-GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
S ESL + GAG + G H+R KR RT Q R K+ F ++ P K +
Sbjct: 168 SDDEESLCKSAHGAGKGASEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 226
Query: 67 QLAQKTGLSKRVLQ 80
LA +TGLS RV+Q
Sbjct: 227 TLAAETGLSVRVVQ 240
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur garnettii]
Length = 359
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 189 EKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|326679635|ref|XP_684360.5| PREDICTED: zinc finger homeobox protein 4-like [Danio rerio]
Length = 3528
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P+ + ++++A K+GL ++V++
Sbjct: 2069 KRPRTRITDDQLKILRAHFDINNSPNEEQIQEMADKSGLPQKVIK 2113
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + ++ NP K L +A + GL KRV+Q
Sbjct: 2522 RDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAHEVGLKKRVVQ 2568
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
S AG PG KR RT + QL+ +K+ F+ + P ++ + L + GL KR
Sbjct: 2823 SKAGGERPGH--------KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKR 2874
Query: 78 VLQ 80
V+Q
Sbjct: 2875 VVQ 2877
>gi|402591364|gb|EJW85293.1| homeobox domain-containing protein [Wuchereria bancrofti]
Length = 285
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
G N+SP + + S Q+ +R RT F HQL ++++F+ N+ PD +++A L++
Sbjct: 215 GNSNASPDTCLISSQKPRRQRTHFTSHQLTELENWFSRNRYPDMATREEIALWISLTE 272
>gi|149058121|gb|EDM09278.1| LIM homeobox transcription factor 1 alpha (predicted) [Rattus
norvegicus]
Length = 263
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 8 SSSMESLSYES-GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
S ESL + GAG + G H+R KR RT Q R K+ F ++ P K +
Sbjct: 168 SDDEESLCKSAHGAGKGASEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 226
Query: 67 QLAQKTGLSKRVLQ 80
LA +TGLS RV+Q
Sbjct: 227 TLAAETGLSVRVVQ 240
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid feature:
LIM1, bp 155 .. 307; amino acid feature: LIM2, bp 341 ..
493 [Rattus norvegicus]
Length = 360
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 190 EKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 237
>gi|326910973|ref|XP_003201838.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Meleagris gallopavo]
Length = 299
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 12 ESLSYESGAGNSSPGSGVHS---HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQL 68
ES+ E G+ S G G H+R+KR RT Q R K+ F ++ P K + L
Sbjct: 89 ESVKSEDEDGSHSHGKGSEDSKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETL 148
Query: 69 AQKTGLSKRVLQ 80
A +TGL+ RV+Q
Sbjct: 149 AAETGLTVRVVQ 160
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+T R+RT QL T+++ ++ N PDA +QL + TGLS RV++
Sbjct: 214 KTTRIRTVLNEKQLHTLRTCYSANPRPDALMKEQLTEMTGLSPRVIR 260
>gi|344236825|gb|EGV92928.1| LIM homeobox transcription factor 1-alpha [Cricetulus griseus]
Length = 333
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 8 SSSMESLSYES-GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
S ESL + GAG + G H+R KR RT Q R K+ F ++ P K +
Sbjct: 119 SDDEESLCKSAHGAGKGASEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 177
Query: 67 QLAQKTGLSKRVLQ 80
LA +TGLS RV+Q
Sbjct: 178 TLAAETGLSVRVVQ 191
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 242 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 288
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 286
>gi|358254958|dbj|GAA56650.1| insulin gene enhancer protein isl-2b [Clonorchis sinensis]
Length = 712
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+T R+RT QL T+++ + N PDA +QL + T LS RV++
Sbjct: 306 QKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTSLSPRVIR 353
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
GAG G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GAGKGVAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTRYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
Length = 1751
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 21/87 (24%)
Query: 15 SYESGAGNSSPGSGVHSHQ---------------------RTKRMRTSFKHHQLRTMKSY 53
SY +G G S+P S Q +T R+RT QL T+++
Sbjct: 1513 SYSNGCGQSTPELTSTSPQVSAGSVGQQPFAQKKDKREKPKTTRVRTVLNEKQLHTLRTC 1572
Query: 54 FNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ N PDA +QL + TGLS RV++
Sbjct: 1573 YAANPRPDALMKEQLVEMTGLSPRVIR 1599
>gi|293339636|gb|ADE44110.1| tailup [Megaselia abdita]
Length = 348
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 23 SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S P G + R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 160 SGPSDG-----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 212
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|391346181|ref|XP_003747357.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Metaseiulus occidentalis]
Length = 434
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 24 SPGSGVHSHQR--TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+PG+G R KR RT Q R K+ F I+Q P K + LA++TGLS R++Q
Sbjct: 201 TPGAGQRPDGRRGPKRPRTILTTAQRRAFKASFEISQKPCRKVREALAKETGLSVRIVQ 259
>gi|410907447|ref|XP_003967203.1| PREDICTED: zinc finger homeobox protein 3-like [Takifugu rubripes]
Length = 2530
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT+ QL + ++I+ NP L+ +A+ GL++RV+Q
Sbjct: 2229 HRRDKRQRTTITPEQLEVLYQRYSIDSNPTRGVLESIARDVGLTRRVVQ 2277
>gi|391336560|ref|XP_003742647.1| PREDICTED: zinc finger homeobox protein 4 [Metaseiulus occidentalis]
Length = 3151
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++YF+IN +P + L ++++K+GL +V++
Sbjct: 2104 KRARTRITDEQLKILRAYFDINNSPTEEALLEMSEKSGLPLKVIK 2148
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 25 PGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
PG G + KR RT QLR MKS F+ + P + + L + GL KRV+Q
Sbjct: 2915 PGGG-----QAKRFRTQMSSTQLRVMKSIFHDYKTPTMAECESLGAQIGLQKRVIQ 2965
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 8 SSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
S+ E + +G+ SP R KR+RT+ QL + + NP K L+
Sbjct: 2680 STDEECSPNKDASGDGSP--------RDKRLRTTILPEQLDFLYQKYQQESNPSRKMLES 2731
Query: 68 LAQKTGLSKRVLQ 80
+A+ GL KRV+Q
Sbjct: 2732 IARDVGLKKRVVQ 2744
>gi|241811703|ref|XP_002416452.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510916|gb|EEC20369.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 155
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 12 ESLSYESGAG-NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQ 70
+ ++ GAG N P + KR RT Q R K+ F I+Q P K + LA+
Sbjct: 62 KEMALVPGAGQNGQPAVRPDGRRGPKRPRTILTTAQRRAFKASFEISQKPCRKVRETLAK 121
Query: 71 KTGLSKRVLQ 80
+TGLS R++Q
Sbjct: 122 ETGLSVRIVQ 131
>gi|350398020|ref|XP_003485063.1| PREDICTED: zinc finger homeobox protein 4-like [Bombus impatiens]
Length = 3073
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 16 YESGAGNSSPGSGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
++ G G S + H+ Q + KR+RT+ QL + + + NP K L+ +A++ GL
Sbjct: 2558 FDEGTGGDSRSNSEHNEQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLETIAREVGL 2617
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2618 KKRVVQ 2623
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +A ++GL +V++
Sbjct: 2001 KRARTRITDEQLKILRAHFDINNSPGEEQILDMAAQSGLPPKVIK 2045
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 20 AGNSSPGSGVHSHQRT-KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
AG G+G + Q + KR RT Q++ MKS F+ + P + + L ++ GL KRV
Sbjct: 2853 AGPPVTGTGSGTGQSSGKRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRV 2912
Query: 79 LQ 80
+Q
Sbjct: 2913 VQ 2914
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2263 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2303
>gi|72094725|ref|XP_796340.1| PREDICTED: retinal homeobox protein Rx2-like [Strongylocentrotus
purpuratus]
Length = 315
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R +R+RT+F QLR +++ F + PD K +L+ KT L ++ +Q
Sbjct: 73 KRNRRIRTTFNPEQLRELENVFQVTHYPDVKTRDELSSKTSLPEQRIQ 120
>gi|324120795|dbj|BAJ78787.1| Islet homologue protein [Lethenteron camtschaticum]
Length = 284
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ R+RT QL+T+++ + N PDA +QL + TGLS RV++
Sbjct: 112 EKATRVRTVLNEKQLQTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 159
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 25 PGSG------VHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
PGSG H H ++T R+RT QL T+++ + N PDA + L + TGLS
Sbjct: 172 PGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEHLVEMTGLS 231
Query: 76 KRVLQ 80
RV++
Sbjct: 232 PRVIR 236
>gi|444730284|gb|ELW70671.1| Insulin enhancer protein ISL-2 [Tupaia chinensis]
Length = 577
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 23 SSPGSG--------VHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
S PGSG VH ++T R+RT QL T+++ + N PDA +QL + TG
Sbjct: 143 SDPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTG 202
Query: 74 LSKRVLQ 80
LS RV++
Sbjct: 203 LSPRVIR 209
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 20 AGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
+G S G +T R+RT QL T+++ + N PDA +QL + TGLS RV+
Sbjct: 178 SGGHSGGQRRSKDAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVI 237
Query: 80 Q 80
+
Sbjct: 238 R 238
>gi|322794370|gb|EFZ17474.1| hypothetical protein SINV_07364 [Solenopsis invicta]
Length = 2966
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 17 ESGAGNSSPGSGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
E G G+ + + H+ Q + KR+RT+ QL + + I NP K L+ +A++ GL
Sbjct: 2432 EEGTGSDNRSNSEHNEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLETIAREVGLK 2491
Query: 76 KRVLQ 80
KRV+Q
Sbjct: 2492 KRVVQ 2496
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + ++A ++GL +V++
Sbjct: 1883 KRARTRITDDQLKILRAHFDINNSPGEEQILEMAAQSGLPPKVIK 1927
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 20 AGNSS--PGSGVHSHQRT-----KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKT 72
AGN+S P +G S T KR RT Q++ MKS F+ + P + + L ++
Sbjct: 2722 AGNTSGPPVTGGQSSGNTGQSGGKRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREI 2781
Query: 73 GLSKRVLQ 80
GL KRV+Q
Sbjct: 2782 GLPKRVVQ 2789
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2145 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2185
>gi|332017785|gb|EGI58446.1| Zinc finger homeobox protein 3 [Acromyrmex echinatior]
Length = 3067
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 17 ESGAGNSSPGSGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
E G G+ + + H+ Q + KR+RT+ QL + + I NP K L+ +A++ GL
Sbjct: 2539 EEGTGSDNRSNSEHNEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLETIAREVGLK 2598
Query: 76 KRVLQ 80
KRV+Q
Sbjct: 2599 KRVVQ 2603
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 18 SGAGNSSPGSGVHSHQRT--------KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
SG+ ++PG+ V S Q + KR RT Q++ MKS F+ + P + + L
Sbjct: 2823 SGSTGNTPGTPVTSGQSSGNTGQSGGKRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLG 2882
Query: 70 QKTGLSKRVLQ 80
++ GL KRV+Q
Sbjct: 2883 REIGLPKRVVQ 2893
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +A ++GL +V++
Sbjct: 1996 KRARTRITDEQLKILRAHFDINNSPGEEQILDMAAQSGLPPKVIK 2040
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2256 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2296
>gi|88954018|gb|ABD59002.1| LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae]
Length = 464
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGVHSHQRT---KRM--RTSFKHHQLRTMKSYFNINQ 58
S D SS S E+G+ S G +++ T KR RT+ K QL T+K+ F
Sbjct: 209 SRDTVSSGNSSDNEAGSATSKDGVSGGNNENTLGAKRRGPRTTIKAKQLETLKAAFAATP 268
Query: 59 NPDAKDLKQLAQKTGLSKRVLQ 80
P +QLAQ+TGL+ RV+Q
Sbjct: 269 KPTRHIREQLAQETGLNMRVIQ 290
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|332252658|ref|XP_003275471.1| PREDICTED: insulin gene enhancer protein ISL-2 [Nomascus
leucogenys]
Length = 222
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
+T R+RT QL T+++ + N PDA +QL + TGLS RV+
Sbjct: 53 QTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 98
>gi|440910599|gb|ELR60379.1| LIM homeobox transcription factor 1-alpha, partial [Bos grunniens
mutus]
Length = 303
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 113 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 161
>gi|170589295|ref|XP_001899409.1| Homeobox domain containing protein [Brugia malayi]
gi|158593622|gb|EDP32217.1| Homeobox domain containing protein [Brugia malayi]
Length = 417
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
G N+SP + + S Q+ +R RT F HQL ++++F+ N+ PD +++A L++
Sbjct: 198 GNSNASPDTCLISSQKPRRQRTHFTSHQLTELENWFSRNRYPDMATREEIALWISLTE 255
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S VH ++ R+RT QL T+++ + N PDA +QL + T LS RV++
Sbjct: 205 SHVHKQEKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTQLSPRVIR 258
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
G G + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GTGKGAAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 19 GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
G G + G H+R KR RT Q R K+ F ++ P K + LA +TGLS RV
Sbjct: 180 GTGKGAAEDG-KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 238
Query: 79 LQ 80
+Q
Sbjct: 239 VQ 240
>gi|78190375|gb|ABB29578.1| ISL-LIM class homeobox protein [Nematostella vectensis]
gi|110339149|gb|ABG67838.1| ISL, partial [Nematostella vectensis]
Length = 60
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL T+++ +N N PDA +QL + TGLS RV++
Sbjct: 3 RVRTVLNEKQLHTLRTCYNANPRPDAMMKEQLVEMTGLSPRVIR 46
>gi|47206484|emb|CAF91851.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1607
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT+ QL + ++I+ NP L+ +A+ GL++RV+Q
Sbjct: 1492 HRRDKRQRTTITPEQLEVLYQRYSIDSNPTRGVLESIARDVGLTRRVVQ 1540
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q++KR RT QL ++ +F+IN P ++ +++ +GL +V++
Sbjct: 960 QQSKRTRTRISEEQLTILRKHFDINSLPSDDEINKMSALSGLPHKVIK 1007
>gi|312102018|ref|XP_003149796.1| hypothetical protein LOAG_14250 [Loa loa]
Length = 354
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ S KR RT QL+ ++ YF+IN +P + +K+++ K L ++V++
Sbjct: 293 AIPSASPAKRARTRITDDQLKILRQYFDINNSPSEQQIKEMSVKAQLPEKVIK 345
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 192 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 192 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|256077688|ref|XP_002575133.1| insulinprotein enhancer protein isl [Schistosoma mansoni]
gi|353229553|emb|CCD75724.1| putative insulinprotein enhancer protein isl [Schistosoma mansoni]
Length = 409
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+T R+RT QL T+++ + N PDA +QL + T LS RV++
Sbjct: 138 QKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTSLSPRVIR 185
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 165 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 223
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 192 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|56694840|gb|AAW23082.1| Islet [Oikopleura dioica]
Length = 381
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 184 KTTRVRTVLNEKQLHTLRTCYQANPRPDALMKEQLVEMTGLSPRVIR 230
>gi|224058880|ref|XP_002190501.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Taeniopygia
guttata]
Length = 379
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 189 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 237
>gi|383792181|ref|NP_001244317.1| LIM homeobox transcription factor 1-alpha [Gallus gallus]
Length = 380
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 191 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 239
>gi|326666245|ref|XP_001922131.3| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Danio
rerio]
Length = 396
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R+KR RT Q R K+ F ++ P K + LA +TGL+ RV+Q
Sbjct: 214 HKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQ 262
>gi|4885363|ref|NP_005306.1| homeobox protein goosecoid-2 [Homo sapiens]
gi|6685480|sp|O15499.1|GSC2_HUMAN RecName: Full=Homeobox protein goosecoid-2; Short=GSC-2; AltName:
Full=Homeobox protein goosecoid-like; Short=GSC-L
gi|2352056|gb|AAC39544.1| GSC-2 [Homo sapiens]
gi|119623457|gb|EAX03052.1| goosecoid-like [Homo sapiens]
Length = 205
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 13 SLSYESGAGNSSPGS-GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
SL +G + PG+ G S +RT+R RT F QL+ +++ F NQ PD ++LA +
Sbjct: 103 SLGAPAGGSGALPGAVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGR 162
Query: 72 TGL 74
L
Sbjct: 163 IRL 165
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 213 KTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVIR 259
>gi|432868110|ref|XP_004071416.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 398
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R+KR RT Q R K+ F ++ P K + LA +TGL+ RV+Q
Sbjct: 209 HKRSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQ 257
>gi|444725137|gb|ELW65716.1| Insulin enhancer protein ISL-1 [Tupaia chinensis]
Length = 308
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 124 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 182
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 26 GSGV----HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G GV H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 182 GKGVAEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
>gi|326924822|ref|XP_003208624.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha-like [Meleagris gallopavo]
Length = 367
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 178 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 226
>gi|13516919|dbj|BAB40339.1| islet [Halocynthia roretzi]
Length = 432
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 30 HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H +T R+RT QL T+++ + N PDA +QL + T LS RV++
Sbjct: 220 HKDPKTTRVRTVLNEKQLHTLRTCYGANPRPDALMKEQLVEMTALSPRVIR 270
>gi|432927775|ref|XP_004081037.1| PREDICTED: zinc finger homeobox protein 4-like [Oryzias latipes]
Length = 3237
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++ F+IN +P+ + ++++++K+GL ++V++
Sbjct: 1744 KRPRTRITDEQLKILRANFDINNSPNEEQIQEMSEKSGLPQKVIK 1788
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
E+G SG H R KR+RT+ QL + + ++ NP K L +A++ GL K
Sbjct: 2188 ENGNDKDGGNSGEEQH-RDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKK 2246
Query: 77 RVLQ 80
RV+Q
Sbjct: 2247 RVVQ 2250
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2522 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2566
>gi|15146041|gb|AAK82937.1| pairberry 2 transcription factor [Schistocerca americana]
Length = 341
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S PG + QR R RT+F QL T++ F Q PD ++LA++TGLS+ +Q
Sbjct: 123 ESEPGIPLKRKQR--RSRTTFSGDQLETLERAFQRTQYPDVYTREELARRTGLSEARIQ 179
>gi|426393492|ref|XP_004063054.1| PREDICTED: homeobox protein goosecoid-2, partial [Gorilla gorilla
gorilla]
Length = 190
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 13 SLSYESGAGNSSPGS-GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
SL +G + PG+ G S +RT+R RT F QL+ +++ F NQ PD ++LA +
Sbjct: 88 SLGAPAGGSGALPGAVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGR 147
Query: 72 TGL 74
L
Sbjct: 148 IRL 150
>gi|327290473|ref|XP_003229947.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like, partial
[Anolis carolinensis]
Length = 293
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+Q
Sbjct: 103 HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 151
>gi|70887599|ref|NP_001020669.1| LIM homeobox transcription factor 1, alpha [Danio rerio]
Length = 366
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 20 AGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
AG S+ V H+R KR RT Q R K+ F ++ P K + LA +TGLS RV+
Sbjct: 171 AGESNITGDVE-HKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVV 229
Query: 80 Q 80
Q
Sbjct: 230 Q 230
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|348508944|ref|XP_003442012.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 368
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R+KR RT Q R K+ F ++ P K + LA +TGL+ RV+Q
Sbjct: 185 HKRSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQ 233
>gi|61200414|gb|AAX39779.1| ISL1 transcription factor, partial [Ovis aries]
Length = 243
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 126 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 184
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature: LIM2,
bp 517 .. 669; amino acid feature: homeodomain, bp 820
.. 999 [Gallus gallus]
Length = 349
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 201 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 259
>gi|118344350|ref|NP_001071998.1| transcription factor protein [Ciona intestinalis]
gi|70570117|dbj|BAE06539.1| transcription factor protein [Ciona intestinalis]
Length = 505
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
GS +R+KR RT Q R K+ F ++Q P K + LA +TGLS RV+Q
Sbjct: 237 GSVTSDGKRSKRPRTILTTAQRRKFKASFEVSQKPCRKVRETLASETGLSPRVVQ 291
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|402883514|ref|XP_003905259.1| PREDICTED: homeobox protein goosecoid-2 [Papio anubis]
Length = 199
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 13 SLSYESGAGNSSPGS-GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
SL +G + PG G S +RT+R RT F QL+ +++ F NQ PD ++LA +
Sbjct: 97 SLGAPAGGSGALPGPVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGR 156
Query: 72 TGL 74
L
Sbjct: 157 IRL 159
>gi|339247641|ref|XP_003375454.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316971202|gb|EFV55014.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 305
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 32 HQRT-KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H++T KR RT HQ +T K+ F ++ P K + LA++TGLS RV+Q
Sbjct: 133 HKKTLKRPRTILTSHQRKTFKASFEVSAKPCRKVREALAKETGLSVRVVQ 182
>gi|327277087|ref|XP_003223297.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Anolis
carolinensis]
Length = 381
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 9 SSMESLSYESGAGN---SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
+ ES+ E GN G H+R+KR RT Q R K+ F ++ P K
Sbjct: 167 APTESVKSEDEDGNHPHGKTGEEGKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVR 226
Query: 66 KQLAQKTGLSKRVLQ 80
+ LA +TGL+ RV+Q
Sbjct: 227 ETLAAETGLTVRVVQ 241
>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
Length = 278
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 16 YESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
YES S + KR RT+ QL T+KS +N + P +QL+Q TGL
Sbjct: 155 YESAKTKGSHFLELEGENPPKRPRTTITAKQLETLKSAYNASPKPARHVREQLSQDTGLD 214
Query: 76 KRVLQ 80
RV+Q
Sbjct: 215 MRVVQ 219
>gi|410902629|ref|XP_003964796.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 376
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R+KR RT Q R K+ F ++ P K + LA +TGL+ RV+Q
Sbjct: 186 HKRSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQ 234
>gi|405971991|gb|EKC36790.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 343
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
SYE G + G H KR RT Q R KS F +N P K +QLA +TGL
Sbjct: 142 SYEDGESDC----GKHP----KRPRTILTTSQRRKFKSAFELNPKPCRKVREQLAAETGL 193
Query: 75 SKRVLQ 80
S RV+Q
Sbjct: 194 SVRVVQ 199
>gi|405963468|gb|EKC29038.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 292
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 29 VHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ SH++ +R RT+F QLR +++ F + PD ++L+QKTGL + +Q
Sbjct: 97 MDSHKK-RRFRTTFTADQLRCLENVFRLTHYPDVNSREELSQKTGLPEARVQ 147
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 168 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|307166172|gb|EFN60421.1| Zinc finger homeobox protein 3 [Camponotus floridanus]
Length = 2987
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 17 ESGAGNSSPGSGVHSHQ-RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
E G G+ + + H+ Q + KR+RT+ QL + + I NP K L+ +A++ GL
Sbjct: 2462 EEGTGSDNRLNSEHNEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLETIAREVGLK 2521
Query: 76 KRVLQ 80
KRV+Q
Sbjct: 2522 KRVVQ 2526
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 15 SYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
S +S GN++ SG KR RT Q++ MKS F+ + P + + L ++ GL
Sbjct: 2760 SAQSSGGNTTSQSG------GKRYRTQMSGTQVKVMKSLFSDYKTPTMAECEMLGREIGL 2813
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2814 PKRVVQ 2819
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2177 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2217
>gi|339261154|ref|XP_003368046.1| LIM homeobox transcription factor 1 alpha [Trichinella spiralis]
gi|316964817|gb|EFV49755.1| LIM homeobox transcription factor 1 alpha [Trichinella spiralis]
Length = 260
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 32 HQRT-KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H++T KR RT HQ +T K+ F ++ P K + LA++TGLS RV+Q
Sbjct: 88 HKKTLKRPRTILTSHQRKTFKASFEVSAKPCRKVREALAKETGLSVRVVQ 137
>gi|348555669|ref|XP_003463646.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cavia
porcellus]
Length = 371
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 178 PALRPHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 236
>gi|297260546|ref|XP_001112633.2| PREDICTED: homeobox protein goosecoid-2-like [Macaca mulatta]
Length = 199
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 13 SLSYESGAGNSSPGS-GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
SL +G + PG G S +RT+R RT F QL+ +++ F NQ PD ++LA +
Sbjct: 97 SLGAPAGGSRALPGPVGPGSQRRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGR 156
Query: 72 TGL 74
L
Sbjct: 157 IRL 159
>gi|390333438|ref|XP_798150.3| PREDICTED: zinc finger homeobox protein 4 isoform 2
[Strongylocentrotus purpuratus]
Length = 3225
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++YF+IN +P + + +++QK+ L +V++
Sbjct: 2026 KRARTRITDDQLKILRAYFDINNSPSEEAIAEMSQKSCLPHKVIK 2070
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + + + NP K L ++ + GL KRV+Q
Sbjct: 2643 KKDKRLRTTISPAQLDILYAKYQEDSNPTRKMLDVISDEVGLKKRVVQ 2690
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 239 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 293
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 25 PGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
P H H ++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 159 PALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 217
>gi|324509239|gb|ADY43889.1| Insulin enhancer protein isl-2b [Ascaris suum]
Length = 427
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+K+ + N PDA +QL + TGLS RV++
Sbjct: 229 KQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARVIR 276
>gi|324508533|gb|ADY43602.1| Insulin gene enhancer protein isl-2b [Ascaris suum]
Length = 452
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+K+ + N PDA +QL + TGLS RV++
Sbjct: 229 KQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARVIR 276
>gi|317419813|emb|CBN81849.1| Zinc finger homeobox protein 4 [Dicentrarchus labrax]
Length = 2526
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 19 GAGN--SSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
GAGN S G G +S R KR RT + QL+ +K+ F+ + P ++ + L + GL
Sbjct: 2303 GAGNPFSKSGKGSNSGDRPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGL 2362
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2363 PKRVVQ 2368
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 1998 GNSSEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2052
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 31/43 (72%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
KR RT QL+ +++ F+IN +P+ + ++++++K+GL +++
Sbjct: 1808 KRPRTRITDDQLKILRANFDINNSPNEEQIQEMSEKSGLPQKL 1850
>gi|317419810|emb|CBN81846.1| Zinc finger homeobox protein 4 [Dicentrarchus labrax]
Length = 3255
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++ F+IN +P+ + ++++++K+GL ++V++
Sbjct: 1746 KRPRTRITDDQLKILRANFDINNSPNEEQIQEMSEKSGLPQKVIK 1790
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 19 GAGN--SSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
GAGN S G G +S R KR RT + QL+ +K+ F+ + P ++ + L + GL
Sbjct: 2503 GAGNPFSKSGKGSNSGDRPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGL 2562
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2563 PKRVVQ 2568
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2198 GNSSEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2252
>gi|317419811|emb|CBN81847.1| Zinc finger homeobox protein 4 [Dicentrarchus labrax]
Length = 3263
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++ F+IN +P+ + ++++++K+GL ++V++
Sbjct: 1754 KRPRTRITDDQLKILRANFDINNSPNEEQIQEMSEKSGLPQKVIK 1798
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 19 GAGN--SSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
GAGN S G G +S R KR RT + QL+ +K+ F+ + P ++ + L + GL
Sbjct: 2511 GAGNPFSKSGKGSNSGDRPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGL 2570
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2571 PKRVVQ 2576
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2206 GNSSEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2260
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
ESG N+ P G +R + RT+ K QL T+K+ F P +QLAQ+TGL+
Sbjct: 165 ESGQANA-PDDGSGGQKR-RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM 222
Query: 77 RVLQ 80
RV+Q
Sbjct: 223 RVIQ 226
>gi|390333436|ref|XP_003723710.1| PREDICTED: zinc finger homeobox protein 4 isoform 1
[Strongylocentrotus purpuratus]
Length = 3407
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++YF+IN +P + + +++QK+ L +V++
Sbjct: 2026 KRARTRITDDQLKILRAYFDINNSPSEEAIAEMSQKSCLPHKVIK 2070
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + + + NP K L ++ + GL KRV+Q
Sbjct: 2643 KKDKRLRTTISPAQLDILYAKYQEDSNPTRKMLDVISDEVGLKKRVVQ 2690
>gi|317419812|emb|CBN81848.1| Zinc finger homeobox protein 4 [Dicentrarchus labrax]
Length = 3289
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 33/45 (73%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++ F+IN +P+ + ++++++K+GL ++V++
Sbjct: 1780 KRPRTRITDDQLKILRANFDINNSPNEEQIQEMSEKSGLPQKVIK 1824
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 19 GAGN--SSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
GAGN S G G +S R KR RT + QL+ +K+ F+ + P ++ + L + GL
Sbjct: 2537 GAGNPFSKSGKGSNSGDRPGHKRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGL 2596
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2597 PKRVVQ 2602
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2232 GNSSEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2286
>gi|1708562|sp|P53410.1|ISL2_CHICK RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531181|gb|AAA62172.1| sequence encoding 37 predicted 5' amino acids has not been
determined, partial [Gallus gallus]
Length = 319
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 148 EKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 195
>gi|194769677|ref|XP_001966928.1| GF19021 [Drosophila ananassae]
gi|190618027|gb|EDV33551.1| GF19021 [Drosophila ananassae]
Length = 2954
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 24 SPGSGVH-SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SPGS V+ S ++ KR+RT+ QL + + NP K L+++++K L KRV+Q
Sbjct: 2691 SPGSPVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQ 2748
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +++QK+ L +V++
Sbjct: 1788 KRARTRITDEQLKILRAHFDINNSPSEESIMEMSQKSNLPMKVVK 1832
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 2 LHSGDLSSSMES------LSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFN 55
L++GD ME YE A + G + Q KR RT+ QL T+KS +N
Sbjct: 118 LNTGDEFYLMEDKKLVCKPDYE--AAKTKDGVCLDGDQPNKRPRTTITAKQLETLKSAYN 175
Query: 56 INQNPDAKDLKQLAQKTGLSKRVLQ 80
+ P +QL+Q TGL RV+Q
Sbjct: 176 NSPKPARHVREQLSQDTGLDMRVVQ 200
>gi|47223454|emb|CAF97941.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3004
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2486 SGEEQH-RDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2538
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 SSSMESLSYESGAGNSSP----GSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPD 61
SSS+ S S G+ +P G G +S R KR RT + QL+ +K+ F+ + P
Sbjct: 2774 SSSLADPSSPSPFGSGNPFSKSGKGSNSGDRPGQKRFRTQMSNLQLKVLKACFSDYRTPT 2833
Query: 62 AKDLKQLAQKTGLSKRVLQ 80
++ + L + GL KRV+Q
Sbjct: 2834 MQECEILGNEIGLPKRVVQ 2852
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 30/43 (69%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRV 78
KR RT QL+ +++ F+IN +P + ++++++K+GL +++
Sbjct: 2293 KRPRTRITDDQLKILRANFDINNSPSEEQIQEMSEKSGLPQKI 2335
>gi|442614403|ref|NP_001259059.1| Zn finger homeodomain 2, isoform C [Drosophila melanogaster]
gi|440218146|gb|AGB96549.1| Zn finger homeodomain 2, isoform C [Drosophila melanogaster]
Length = 2805
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 5 GD--LSSSMESLSYESGAGNSSP-----GSGVHSHQ---RTKRMRTSFKHHQLRTMKSYF 54
GD L+S + S+ +SG + P + +S Q KR RT QL+ ++++F
Sbjct: 1757 GDTHLTSGVSSIPVDSGKATAVPPQTQLNANANSQQLASNQKRARTRITDDQLKILRAHF 1816
Query: 55 NINQNPDAKDLKQLAQKTGLSKRVLQ 80
+IN +P + + +++QK L +V++
Sbjct: 1817 DINNSPSEESIMEMSQKANLPMKVVK 1842
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + NP K L+++++K L KRV+Q
Sbjct: 2758 KQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQ 2805
>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
vitripennis]
Length = 458
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 2 LHSGDLS---SSMESLSYES--GAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNI 56
LH D S S ES S+++ GA ++ G S + R+RT QL T+++ +
Sbjct: 198 LHPNDGSLSDSGSESGSHKTVGGARGAAGHKGGGSDGKPTRVRTVLNEKQLHTLRTCYAA 257
Query: 57 NQNPDAKDLKQLAQKTGLSKRVLQ 80
N PDA +QL + TGLS RV++
Sbjct: 258 NPRPDALMKEQLVEMTGLSPRVIR 281
>gi|410908911|ref|XP_003967934.1| PREDICTED: zinc finger homeobox protein 4-like [Takifugu rubripes]
Length = 3224
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2188 SGEEQH-RDKRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2240
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 19 GAGN--SSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 74
GAGN S G G +S R KR RT + QL+ +K+ F+ + P ++ + L + GL
Sbjct: 2489 GAGNPFSKSGKGSNSGDRPGQKRFRTQMSNLQLKVLKACFSDYRTPTMQECEILGNEIGL 2548
Query: 75 SKRVLQ 80
KRV+Q
Sbjct: 2549 PKRVVQ 2554
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ +++ F+IN +P + +++++ K+GL ++V++
Sbjct: 1734 KRPRTRITDDQLKILRANFDINNSPSEEQIQEMSDKSGLPQKVIK 1778
>gi|158823|gb|AAA29051.1| zinc-finger homeodomain protein 2 [Drosophila melanogaster]
Length = 3005
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 7 LSSSMESLSYESGAGNSSP-----GSGVHSHQ---RTKRMRTSFKHHQLRTMKSYFNINQ 58
L+S + S+ +SG + P + +S Q KR RT QL+ ++++F+IN
Sbjct: 1761 LTSGVSSIPVDSGKATAVPPQTQLNANANSQQLASNQKRARTRITDDQLKILRAHFDINN 1820
Query: 59 NPDAKDLKQLAQKTGLSKRVLQ 80
+P + + +++QK L +V++
Sbjct: 1821 SPSEESIMEMSQKANLPMKVVK 1842
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + NP K L+++++K L KRV+Q
Sbjct: 2758 KQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQ 2805
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 216 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 270
>gi|24638633|ref|NP_524623.2| Zn finger homeodomain 2, isoform A [Drosophila melanogaster]
gi|48429221|sp|P28167.2|ZFH2_DROME RecName: Full=Zinc finger protein 2; AltName: Full=Zinc finger
homeodomain protein 2
gi|10726314|gb|AAF59339.2| Zn finger homeodomain 2, isoform A [Drosophila melanogaster]
Length = 3005
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 5 GD--LSSSMESLSYESGAGNSSP-----GSGVHSHQ---RTKRMRTSFKHHQLRTMKSYF 54
GD L+S + S+ +SG + P + +S Q KR RT QL+ ++++F
Sbjct: 1757 GDTHLTSGVSSIPVDSGKATAVPPQTQLNANANSQQLASNQKRARTRITDDQLKILRAHF 1816
Query: 55 NINQNPDAKDLKQLAQKTGLSKRVLQ 80
+IN +P + + +++QK L +V++
Sbjct: 1817 DINNSPSEESIMEMSQKANLPMKVVK 1842
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + NP K L+++++K L KRV+Q
Sbjct: 2758 KQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQ 2805
>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
Length = 392
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
++ A + G + Q KR RT+ QL T+K +N + P +QL+Q TGL
Sbjct: 122 QAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDM 181
Query: 77 RVLQ 80
RV+Q
Sbjct: 182 RVVQ 185
>gi|321478698|gb|EFX89655.1| putative zinc finger homeobox protein 3 [Daphnia pulex]
Length = 2246
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + ++A+++GL +V++
Sbjct: 1041 KRARTRISDDQLKILRAHFDINNSPSEETIAEMARQSGLPPKVIK 1085
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+G S + KR RT Q+R MKS F+ + P + + L ++ GL KRV+Q
Sbjct: 2012 TGSASGGQNKRFRTQMSAVQVRVMKSLFSDYKTPTMAECEALGREIGLPKRVVQ 2065
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + + NP K L+ ++++ GL KRV+Q
Sbjct: 1705 RDKRLRTTILPEQLDFLYQQYQLESNPSRKMLETISREVGLKKRVVQ 1751
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 218 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 272
>gi|195564294|ref|XP_002105757.1| GD24406 [Drosophila simulans]
gi|194201631|gb|EDX15207.1| GD24406 [Drosophila simulans]
Length = 2054
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 7 LSSSMESLSYESGAGNSSP-----GSGVHSHQ---RTKRMRTSFKHHQLRTMKSYFNINQ 58
L++ + SL +SG + P + +S Q KR RT QL+ ++++F+IN
Sbjct: 933 LTTGVSSLPVDSGKATAVPPQTQLNANANSQQLASNQKRARTRITDDQLKILRAHFDINN 992
Query: 59 NPDAKDLKQLAQKTGLSKRVLQ 80
+P + + +++QK L +V++
Sbjct: 993 SPSEESIMEMSQKANLPMKVVK 1014
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + NP K L+++++K L KRV+Q
Sbjct: 1884 KQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQ 1931
>gi|47220025|emb|CAG12173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 318
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R+KR RT Q R K+ F ++ P K + LA +TGL+ RV+Q
Sbjct: 113 HKRSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQ 161
>gi|306020805|gb|ADM79456.1| islet [Cupiennius salei]
Length = 249
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 15 SYESGAGNSSPGSGVH---SHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
S ++G S VH S + R+RT QL T+++ + N PDA +QL +
Sbjct: 113 SMQTGRNRDSVRPQVHKQGSDHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEM 172
Query: 72 TGLSKRVLQ 80
TGLS RV++
Sbjct: 173 TGLSPRVIR 181
>gi|328700884|ref|XP_003241415.1| PREDICTED: zinc finger homeobox protein 3-like isoform 3
[Acyrthosiphon pisum]
Length = 3361
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+ QL + + I NP K L+ +AQ+ GL KRV+Q
Sbjct: 2584 KDKRLRTTILPEQLDYLYQKYQIESNPSRKMLESIAQEVGLKKRVVQ 2630
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P ++++A ++GL +V++
Sbjct: 1983 KRARTRITDDQLKILRAHFDINNSPSEDQIQEMASQSGLPPKVIK 2027
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G S + KR RT + Q++ MK+ F+ + P + + L ++ GL+KRV+Q
Sbjct: 2820 APGGSSSSQNKRYRTQMSNVQVKVMKALFDDYKTPTMGECEMLGREIGLAKRVVQ 2874
>gi|393906731|gb|EJD74377.1| homeobox domain-containing protein [Loa loa]
Length = 1426
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ S KR RT QL+ ++ YF+IN +P + +K+++ K L ++V++
Sbjct: 594 AIPSASPAKRARTRITDDQLKILRQYFDINNSPSEQQIKEMSVKAQLPEKVIK 646
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +QLRT++ +F+ P DL+ L++K LS RV+
Sbjct: 770 RTRFTDYQLRTLQQFFDKQAYPKDDDLEVLSKKLQLSPRVI 810
>gi|313233722|emb|CBY09892.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 208 RRVRTVLNEKQLHTLRTCYQANPRPDALMKEQLVEMTGLSPRVIR 252
>gi|47077439|dbj|BAD18607.1| unnamed protein product [Homo sapiens]
Length = 1103
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 85 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 137
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 417 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 461
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 216 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 270
>gi|340717324|ref|XP_003397134.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
terrestris]
gi|350407611|ref|XP_003488142.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
impatiens]
Length = 458
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 241 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 287
>gi|195354385|ref|XP_002043678.1| GM26799 [Drosophila sechellia]
gi|194128866|gb|EDW50909.1| GM26799 [Drosophila sechellia]
Length = 1811
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 7 LSSSMESLSYESGAGNSSP-----GSGVHSHQ---RTKRMRTSFKHHQLRTMKSYFNINQ 58
L++ + SL +SG + P + +S Q KR RT QL+ ++++F+IN
Sbjct: 568 LTTGVSSLPVDSGKATAVPPQTQLNANANSQQLASNQKRARTRITDDQLKILRAHFDINN 627
Query: 59 NPDAKDLKQLAQKTGLSKRVLQ 80
+P + + +++QK L +V++
Sbjct: 628 SPSEESIMEMSQKANLPMKVVK 649
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + NP K L+++++K L KRV+Q
Sbjct: 1564 KQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQ 1611
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 216 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 270
>gi|328700882|ref|XP_003241414.1| PREDICTED: zinc finger homeobox protein 3-like isoform 2
[Acyrthosiphon pisum]
gi|328700886|ref|XP_001952854.2| PREDICTED: zinc finger homeobox protein 3-like isoform 1
[Acyrthosiphon pisum]
Length = 3042
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+ QL + + I NP K L+ +AQ+ GL KRV+Q
Sbjct: 2584 KDKRLRTTILPEQLDYLYQKYQIESNPSRKMLESIAQEVGLKKRVVQ 2630
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P ++++A ++GL +V++
Sbjct: 1983 KRARTRITDDQLKILRAHFDINNSPSEDQIQEMASQSGLPPKVIK 2027
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G S + KR RT + Q++ MK+ F+ + P + + L ++ GL+KRV+Q
Sbjct: 2820 APGGSSSSQNKRYRTQMSNVQVKVMKALFDDYKTPTMGECEMLGREIGLAKRVVQ 2874
>gi|195035223|ref|XP_001989077.1| GH11521 [Drosophila grimshawi]
gi|193905077|gb|EDW03944.1| GH11521 [Drosophila grimshawi]
Length = 283
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 1 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 60
+++SG S S +S+ + +G P G + R+RT QL T+++ +N N P
Sbjct: 45 VINSGSESGSHKSIREKRPSG---PSDG-----KPTRVRTVLNEKQLHTLRTCYNANPRP 96
Query: 61 DAKDLKQLAQKTGLSKRVLQ 80
DA +QL + T LS RV++
Sbjct: 97 DALMKEQLVEMTSLSPRVIR 116
>gi|119626810|gb|EAX06405.1| LIM homeobox 8 [Homo sapiens]
Length = 117
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 26/31 (83%)
Query: 50 MKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
M++ F + NPDA+ L++LA++TGLS+RV+Q
Sbjct: 1 MQAQFAQDNNPDAQTLQKLAERTGLSRRVIQ 31
>gi|432863495|ref|XP_004070095.1| PREDICTED: zinc finger homeobox protein 4-like [Oryzias latipes]
Length = 2315
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H+R KR RT+ QL + ++++ NP L+ +A+ GL++RV+Q
Sbjct: 2011 HRRDKRQRTTITPEQLEVLYQRYSLDSNPTRGVLESIARDVGLTRRVVQ 2059
>gi|357621069|gb|EHJ73037.1| Zn finger homeodomain 2 [Danaus plexippus]
Length = 2756
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 32/45 (71%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++S+F+IN +P + + ++A+++GL+ +V++
Sbjct: 1816 KRARTRITDEQLKILRSHFDINNSPSDEAIAKMAKQSGLATKVIK 1860
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+ QL + + I NP K L+ +A++ GL KRV+Q
Sbjct: 2358 KDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQ 2404
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 9 SSMESLSYESGAGNSSPGSGVHSHQRT--KRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
++ E++ + +SP +G R KR RT Q++ MKS F+ + P + +
Sbjct: 2576 TASETMEFYEEDEPTSPIAGQQHTPRPPGKRFRTQMSSVQVKIMKSLFSDYKTPTMAECE 2635
Query: 67 QLAQKTGLSKRVLQ 80
L ++ GL KRV+Q
Sbjct: 2636 ALGREIGLPKRVVQ 2649
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +Q++ ++ +F N P DL+ L++ GLS RV+
Sbjct: 2079 RTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVI 2119
>gi|224046401|ref|XP_002198070.1| PREDICTED: zinc finger homeobox protein 4 [Taeniopygia guttata]
Length = 3535
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 2502 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 2554
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 2836 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 2880
>gi|241999336|ref|XP_002434311.1| lhx3, putative [Ixodes scapularis]
gi|215496070|gb|EEC05711.1| lhx3, putative [Ixodes scapularis]
Length = 252
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 35 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ QL T+KS +N + P +QL+Q TGL RV+Q
Sbjct: 93 TKRPRTTITAKQLETLKSAYNNSPKPARHVREQLSQDTGLDMRVVQ 138
>gi|386763452|ref|NP_001245425.1| Zn finger homeodomain 2, isoform B [Drosophila melanogaster]
gi|383293093|gb|AFH06785.1| Zn finger homeodomain 2, isoform B [Drosophila melanogaster]
Length = 3003
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 5 GD--LSSSMESLSYESGAGNSSP---------GSGVHSHQRTKRMRTSFKHHQLRTMKSY 53
GD L+S + S+ +SG + P S + S+Q KR RT QL+ ++++
Sbjct: 1756 GDTHLTSGVSSIPVDSGKATAVPPQTQLNANANSQLASNQ--KRARTRITDDQLKILRAH 1813
Query: 54 FNINQNPDAKDLKQLAQKTGLSKRVLQ 80
F+IN +P + + +++QK L +V++
Sbjct: 1814 FDINNSPSEESIMEMSQKANLPMKVVK 1840
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ KR+RT+ QL + + NP K L+++++K L KRV+Q
Sbjct: 2756 KQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQ 2803
>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
Length = 421
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 213 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 267
>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
occidentalis]
Length = 460
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 273 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 319
>gi|328793255|ref|XP_003251852.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis
mellifera]
Length = 418
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 201 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 247
>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
Length = 467
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 212 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 266
>gi|260829945|ref|XP_002609922.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
gi|229295284|gb|EEN65932.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
Length = 430
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 191 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 237
>gi|380797493|gb|AFE70622.1| zinc finger homeobox protein 4, partial [Macaca mulatta]
Length = 1435
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 417 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 469
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 749 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 793
>gi|380018327|ref|XP_003693083.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis florea]
Length = 419
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 202 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 248
>gi|449667571|ref|XP_004206594.1| PREDICTED: uncharacterized protein LOC100198304 [Hydra
magnipapillata]
Length = 1120
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 10 SMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLA 69
S ESL S A + P +++ RT QL +K F +NQ P + ++LA
Sbjct: 118 SDESLEKSSNA-SVEPSDNEDEINKSRGPRTVINLKQLEVLKETFKVNQKPSRLEREKLA 176
Query: 70 QKTGLSKRVLQ 80
KTGL+ RV+Q
Sbjct: 177 TKTGLTTRVIQ 187
>gi|47077255|dbj|BAD18546.1| unnamed protein product [Homo sapiens]
Length = 907
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 27 SGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
SG H R KR+RT+ QL + + ++ NP K L +A++ GL KRV+Q
Sbjct: 289 SGEDQH-RDKRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQ 341
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT + QL+ +K+ F+ + P ++ + L + GL KRV+Q
Sbjct: 621 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQ 665
>gi|357617942|gb|EHJ71081.1| insulinprotein enhancer protein isl [Danaus plexippus]
Length = 273
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 105 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 151
>gi|195163209|ref|XP_002022444.1| GL13034 [Drosophila persimilis]
gi|194104436|gb|EDW26479.1| GL13034 [Drosophila persimilis]
Length = 332
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP S +R R T+ K QL +K+ FN P +QLA++TGL
Sbjct: 228 DSQAENKSPDDANGSKRRGPR--TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPM 285
Query: 77 RVLQ 80
RV+Q
Sbjct: 286 RVIQ 289
>gi|6980082|gb|AAF34717.1|AF226616_1 LIM-homeodomain transcription factor islet [Branchiostoma floridae]
Length = 419
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 180 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 226
>gi|209489466|gb|ACI49225.1| hypothetical protein Csp3_JD05.010 [Caenorhabditis angaria]
Length = 344
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+KS F P +QLAQ+TGL+ RV+Q
Sbjct: 180 RTTIKAKQLETLKSAFAATPKPTRHIREQLAQETGLNMRVIQ 221
>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
Length = 534
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
Length = 467
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 212 GGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQ 266
>gi|297708248|ref|XP_002830886.1| PREDICTED: homeobox protein goosecoid-2 [Pongo abelii]
Length = 205
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 13 SLSYESGAGNSSPGS-GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
SL +G + PG+ G S +RT+R RT F QL+ ++ F NQ PD ++LA +
Sbjct: 103 SLGAPAGGSGALPGAVGPGSQRRTRRHRTIFNEDQLQALEELFVQNQYPDVSTRERLAGR 162
Query: 72 TGL 74
L
Sbjct: 163 IRL 165
>gi|70570095|dbj|BAE06535.1| transcription factor protein [Ciona intestinalis]
Length = 386
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 7 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRM--RTSFKHHQLRTMKSYFNINQNPDAKD 64
+S + S + S P G + TKR RT+ K QL T+K+ F P
Sbjct: 184 MSQQTKDSSASTAIDTSPPQQGCIAIAATKRRGPRTTIKAKQLETLKNAFLSTPKPTRHI 243
Query: 65 LKQLAQKTGLSKRVLQ 80
++LAQ TGLS RV+Q
Sbjct: 244 REKLAQDTGLSMRVIQ 259
>gi|383858654|ref|XP_003704814.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Megachile
rotundata]
Length = 416
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 199 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 245
>gi|291410128|ref|XP_002721362.1| PREDICTED: paired like homeodomain factor 1-like [Oryctolagus
cuniculus]
Length = 227
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 4 SGDLSSSMESLSYE-----SGAGNSSP-----GSGVHSHQRTKRMRTSFKHHQLRTMKSY 53
+G L S++ LS + SG G P G H R +R RT+F QL ++S
Sbjct: 30 AGTLISAVADLSPQPCRRLSGVGVGRPRPSPQGQRARPHSR-RRHRTTFNPAQLAQLESA 88
Query: 54 FNINQNPDAKDLKQLAQKTGLSKRVLQ 80
F NQ PD + LA+ TGLS+ +Q
Sbjct: 89 FGRNQYPDIWARESLARDTGLSEARIQ 115
>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
Length = 534
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|270004902|gb|EFA01350.1| Zn finger homeodomain 2 [Tribolium castaneum]
Length = 2825
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGV-------HSHQRTKRMRTSFKHHQLRTMKSYFNI 56
S +S + E ES +SP S H++ TKR RT Q++ MKS F+
Sbjct: 2480 SDSMSETTEIFDDESNP--TSPASSTQSNTQRHHNNTGTKRFRTQMSSIQVKVMKSLFSD 2537
Query: 57 NQNPDAKDLKQLAQKTGLSKRVLQ 80
+ P + + L ++ GL KRV+Q
Sbjct: 2538 YKTPTMAECEMLGREIGLPKRVVQ 2561
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + ++A ++GL +V++
Sbjct: 1699 KRARTRITDDQLKILRAHFDINNSPSEEQIHEMASQSGLPPKVIK 1743
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+ QL + + I NP K L+ +A++ GL KRV+Q
Sbjct: 2252 KDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQ 2298
>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
Length = 534
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|258645165|ref|NP_001158279.1| tailup [Tribolium castaneum]
Length = 431
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 241 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 284
>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
Length = 539
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 238 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 284
>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
Length = 540
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|91079814|ref|XP_969252.1| PREDICTED: similar to Zinc finger homeobox protein 3 (Zinc finger
homeodomain protein 3) (ZFH-3) (Alpha-fetoprotein
enhancer-binding protein) (AT motif-binding factor)
(AT-binding transcription factor 1) [Tribolium castaneum]
Length = 2610
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGV-------HSHQRTKRMRTSFKHHQLRTMKSYFNI 56
S +S + E ES +SP S H++ TKR RT Q++ MKS F+
Sbjct: 2352 SDSMSETTEIFDDESNP--TSPASSTQSNTQRHHNNTGTKRFRTQMSSIQVKVMKSLFSD 2409
Query: 57 NQNPDAKDLKQLAQKTGLSKRVLQ 80
+ P + + L ++ GL KRV+Q
Sbjct: 2410 YKTPTMAECEMLGREIGLPKRVVQ 2433
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ KR+RT+ QL + + I NP K L+ +A++ GL KRV+Q
Sbjct: 2124 KDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQ 2170
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + ++A ++GL +V++
Sbjct: 1719 KRARTRITDDQLKILRAHFDINNSPSEEQIHEMASQSGLPPKVIK 1763
>gi|260798426|ref|XP_002594201.1| AT-binding transcription factor1 [Branchiostoma floridae]
gi|229279434|gb|EEN50212.1| AT-binding transcription factor1 [Branchiostoma floridae]
Length = 3231
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 32 HQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
H + KR RT QL+ ++++F+IN +P + ++++K+GL +V++
Sbjct: 2019 HFQGKRPRTRITDEQLKILRAHFDINNSPSEDQILEMSEKSGLPTKVIK 2067
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR+RT+ QL + + I+ NP K L +A++ GL KRV+Q
Sbjct: 2428 KRLRTTITPEQLEILYQKYQIDCNPTRKMLDLIAREVGLKKRVVQ 2472
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
D+ S S+ + P S + H KR RT + QL+ +KS F + P ++
Sbjct: 2700 DIHSDAGSVGRSEESSTCDPQSPSNKHLPGKRYRTQMSNLQLKMLKSAFTEYKTPTMQEC 2759
Query: 66 KQLAQKTGLSKRVLQ 80
+ L + GL KRV+Q
Sbjct: 2760 EILGNEIGLPKRVVQ 2774
>gi|198413993|ref|XP_002122079.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 387
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 7 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRM--RTSFKHHQLRTMKSYFNINQNPDAKD 64
+S + S + S P G + TKR RT+ K QL T+K+ F P
Sbjct: 185 MSQQTKDSSASTAIDTSPPQQGCIAIAATKRRGPRTTIKAKQLETLKNAFLSTPKPTRHI 244
Query: 65 LKQLAQKTGLSKRVLQ 80
++LAQ TGLS RV+Q
Sbjct: 245 REKLAQDTGLSMRVIQ 260
>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
Length = 550
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
Length = 534
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
Length = 465
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ +N N PDA +QL + T LS RV++
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIR 286
>gi|270011029|gb|EFA07477.1| tailup [Tribolium castaneum]
Length = 411
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 217 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 260
>gi|158287501|ref|XP_309513.3| AGAP011134-PA [Anopheles gambiae str. PEST]
gi|157019681|gb|EAA05265.3| AGAP011134-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP G S +R R T+ K QL +K+ F+ P +QLA++TGL
Sbjct: 228 DSQAENKSPDDGAGSKRRGPR--TTIKAKQLEVLKNAFSQTPKPTRHIREQLAKETGLPM 285
Query: 77 RVLQ 80
RV+Q
Sbjct: 286 RVIQ 289
>gi|328778294|ref|XP_394848.4| PREDICTED: protein gooseberry-neuro-like [Apis mellifera]
Length = 441
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++ +R RT+F QL +++ F Q PD ++LAQ+TGL++ +Q
Sbjct: 172 GIPLKRKQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQ 224
>gi|307184076|gb|EFN70611.1| Insulin gene enhancer protein ISL-1 [Camponotus floridanus]
Length = 408
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 193 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 239
>gi|159164036|pdb|2DA3|A Chain A, Solution Structure Of The Third Homeobox Domain Of At-
Binding Transcription Factor 1 (Atbf1)
Length = 80
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
QR KR+RT+ QL + + ++ NP K L +A + GL KRV+Q
Sbjct: 15 QRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQ 62
>gi|380027561|ref|XP_003697490.1| PREDICTED: protein gooseberry-neuro-like [Apis florea]
Length = 442
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++ +R RT+F QL +++ F Q PD ++LAQ+TGL++ +Q
Sbjct: 173 GIPLKRKQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQ 225
>gi|332023208|gb|EGI63464.1| Insulin gene enhancer protein ISL-1 [Acromyrmex echinatior]
Length = 432
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 217 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 263
>gi|350592672|ref|XP_001927461.3| PREDICTED: homeobox protein goosecoid-2-like [Sus scrofa]
Length = 204
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 6 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 65
L+SS E GAG+ P +RT+R RT F QL+ +++ F NQ PD
Sbjct: 102 PLASSTEGSGALPGAGSPGP------QRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTR 155
Query: 66 KQLAQKTGL 74
++LA + L
Sbjct: 156 ERLAGRIRL 164
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+ R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 163 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 209
>gi|170051198|ref|XP_001861656.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872533|gb|EDS35916.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 464
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP G S +R R T+ K QL +K+ F+ P +QLA++TGL
Sbjct: 105 DSQAENKSPDDGGGSKRRGPR--TTIKAKQLEVLKTAFSQTPKPTRHIREQLAKETGLPM 162
Query: 77 RVLQ 80
RV+Q
Sbjct: 163 RVIQ 166
>gi|350420707|ref|XP_003492597.1| PREDICTED: protein gooseberry-neuro-like [Bombus impatiens]
Length = 442
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++ +R RT+F QL +++ F Q PD ++LAQ+TGL++ +Q
Sbjct: 173 GIPLKRKQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQ 225
>gi|322794106|gb|EFZ17315.1| hypothetical protein SINV_02934 [Solenopsis invicta]
Length = 486
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 19 GAGNSSPGS------GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKT 72
G G +S GS G+ ++ +R RT+F HQL ++ F Q PD ++LAQ+T
Sbjct: 155 GDGKTSSGSDCESEPGITLKRKQRRSRTTFTAHQLDELERAFEKTQYPDIYVREELAQRT 214
Query: 73 GLSKRVLQ 80
LS+ +Q
Sbjct: 215 RLSEARIQ 222
>gi|157830485|pdb|1BW5|A Chain A, The Nmr Solution Structure Of The Homeodomain Of The Rat
Insulin Gene Enhancer Protein Isl-1, 50 Structures
Length = 66
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+T R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 48
>gi|405959418|gb|EKC25460.1| Zinc finger homeobox protein 3 [Crassostrea gigas]
Length = 2152
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 12 ESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQK 71
+S SY + NS G HS + KR RT Q+R MKS F + P + + L ++
Sbjct: 1662 DSNSYSTSRPNSPLG---HSSIQGKRYRTQMTSLQVRIMKSIFIDYKTPTMAECEMLGRE 1718
Query: 72 TGLSKRVLQ 80
GL KRV+Q
Sbjct: 1719 IGLPKRVVQ 1727
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + + I+ NP K L+ ++ + GL KRV+Q
Sbjct: 1400 RDKRLRTTILPEQLDYLYQKYQIDCNPSRKQLETISAEVGLKKRVVQ 1446
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 31/45 (68%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + +++++GL ++V++
Sbjct: 1052 KRARTRINDEQLKILRAHFDINNSPSEEQINAMSEQSGLPQKVIK 1096
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 30 HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
HS + RT F +Q++ ++ YF N P +L L+Q LS RV+
Sbjct: 1153 HSGYAKRANRTRFTDYQIKVLQEYFEQNAYPKDDELDHLSQMLNLSPRVI 1202
>gi|50344739|ref|NP_001002043.1| islet1, like [Danio rerio]
gi|37682137|gb|AAQ97995.1| ISL1 transcription factor, LIM/homeodomain [Danio rerio]
Length = 323
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R R+RT QL +++ + N PDA +QL + TGLS RV++
Sbjct: 170 ERATRVRTVLSETQLCMLQTCYTANPRPDALMKEQLVEMTGLSPRVIR 217
>gi|256077038|ref|XP_002574815.1| omeobox protein aristaless-related [Schistosoma mansoni]
gi|350646462|emb|CCD58861.1| omeobox protein aristaless-related [Schistosoma mansoni]
Length = 167
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
R +R+RT+F +QL T+++ F +NQ PD QLA + LS
Sbjct: 2 RPRRLRTTFTTYQLHTLETSFLLNQYPDVAARDQLASQLNLS 43
>gi|307194845|gb|EFN77027.1| Zinc finger homeobox protein 4 [Harpegnathos saltator]
Length = 2524
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
ES G++ S + + KR+RT+ QL + + + NP K L+ +A++ GL K
Sbjct: 2010 ESMTGDNRSNSEHNEQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLETIAREVGLKK 2069
Query: 77 RVLQ 80
RV+Q
Sbjct: 2070 RVVQ 2073
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++++F+IN +P + + ++A ++GL +V++
Sbjct: 1680 KRARTRITDEQLKILRAHFDINNSPGEEQILEMAAQSGLPPKVIK 1724
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT Q++ MKS F+ + P + + L ++ GL KRV+Q
Sbjct: 2313 KRYRTQMSATQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRVVQ 2357
>gi|332028547|gb|EGI68584.1| Segmentation protein paired [Acromyrmex echinatior]
Length = 492
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 19 GAGNSSPGS------GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKT 72
G G +S GS G+ ++ +R RT+F HQL ++ F Q PD ++LAQ+T
Sbjct: 177 GDGKTSSGSDCESEPGITLKRKQRRSRTTFTAHQLDELERAFEKTQYPDIYVREELAQRT 236
Query: 73 GLSKRVLQ 80
LS+ +Q
Sbjct: 237 RLSEARIQ 244
>gi|383852902|ref|XP_003701964.1| PREDICTED: protein gooseberry-neuro-like [Megachile rotundata]
Length = 440
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++ +R RT+F QL +++ F Q PD ++LAQ+TGL++ +Q
Sbjct: 172 GIPLKRKQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQ 224
>gi|390351642|ref|XP_797654.3| PREDICTED: uncharacterized protein LOC593067 [Strongylocentrotus
purpuratus]
Length = 392
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+H ++ +R+RT+F QL+ ++ FN PD ++LA KT L++ +Q
Sbjct: 106 GLHEKRKQRRIRTTFTSAQLKELEKAFNETHYPDIYKREELALKTDLTEARVQ 158
>gi|340724274|ref|XP_003400508.1| PREDICTED: protein gooseberry-neuro-like [Bombus terrestris]
Length = 442
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++ +R RT+F QL +++ F Q PD ++LAQ+TGL++ +Q
Sbjct: 173 GIPLKRKQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQ 225
>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
Length = 450
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 26 GSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G + Q KR RT+ QL T+K +N + P +QL+Q TGL RV+Q
Sbjct: 182 GGSIDGDQPNKRPRTTITAKQLETLKLAYNNSPKPARHVREQLSQDTGLDMRVVQ 236
>gi|307209962|gb|EFN86739.1| Insulin gene enhancer protein ISL-1 [Harpegnathos saltator]
Length = 407
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 196 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 239
>gi|15146039|gb|AAK82936.1| pairberry 1 transcription factor [Schistocerca americana]
Length = 234
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S PG + QR R RT+F QL T++ F Q PD ++LAQKT L++ +Q
Sbjct: 125 ESEPGIPLKRKQR--RSRTTFSGDQLETLERAFQRTQYPDVYTREELAQKTKLTEARVQ 181
>gi|403290024|ref|XP_003936133.1| PREDICTED: homeobox protein prophet of Pit-1-like [Saimiri
boliviensis boliviensis]
Length = 226
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 2 LHSGDLSSSMESLSYESGAGNSSPGSGV-------------HSHQRTKRMRTSFKHHQLR 48
L +G L++ +ES + S PG+GV H R +R RT+F QL
Sbjct: 27 LAAGPLTTMVESRAPPS---RKLPGAGVGRARFSPQGGQRGRPHSR-RRHRTTFSAVQLE 82
Query: 49 TMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++S F NQ PD + LA+ TGLS+ +Q
Sbjct: 83 QLESAFGRNQYPDIWARESLARDTGLSEARIQ 114
>gi|390459584|ref|XP_003732339.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein prophet of
Pit-1-like [Callithrix jacchus]
Length = 226
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 6 DLSSSMESLSYESGAGNS--SPGSGV--HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPD 61
DLS+ +G G SP G H H R +R RT+F QL ++S F NQ PD
Sbjct: 37 DLSAPPSRKLPSAGVGRPRFSPQGGQRGHPHSR-RRHRTTFSAVQLEQLESAFGRNQYPD 95
Query: 62 AKDLKQLAQKTGLSKRVLQ 80
+ LA+ TGLS+ +Q
Sbjct: 96 IWARESLARDTGLSEARIQ 114
>gi|443702258|gb|ELU00387.1| hypothetical protein CAPTEDRAFT_102070, partial [Capitella
teleta]
Length = 59
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR+RT F QL+ + + +N NP ++L+++A GL++RV Q
Sbjct: 3 KRVRTEFSDEQLKILHGEYLLNTNPVREELERIADLAGLTRRVTQ 47
>gi|402593564|gb|EJW87491.1| hypothetical protein WUBG_01597 [Wuchereria bancrofti]
Length = 1135
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YF+IN +P + +K+++ K L ++V++
Sbjct: 610 KRARTRITDDQLKILRQYFDINNSPSEQQIKEMSLKAQLPEKVIK 654
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +QLRT++ +F+ P DL+ L++K LS RV+
Sbjct: 779 RTRFTDYQLRTLQQFFDKQAYPKDDDLEVLSKKLQLSPRVI 819
>gi|307180596|gb|EFN68551.1| Segmentation protein paired [Camponotus floridanus]
Length = 516
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++ +R RT+F HQL ++ F Q PD ++LAQ+T LS+ +Q
Sbjct: 207 GIQLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTRLSEARIQ 259
>gi|170593449|ref|XP_001901477.1| Homeobox domain containing protein [Brugia malayi]
gi|158591544|gb|EDP30157.1| Homeobox domain containing protein [Brugia malayi]
Length = 1436
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QL+ ++ YF+IN +P + +K+++ K L ++V++
Sbjct: 612 KRARTRITDDQLKILRQYFDINNSPSEQQIKEMSLKAQLPEKVIK 656
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL 79
RT F +QLRT++ +F+ P DL+ L++K LS RV+
Sbjct: 784 RTRFTDYQLRTLQQFFDKQAYPKDDDLEVLSKKLQLSPRVI 824
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 20 AGNSSPGSGVHSHQRT----KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 75
A S+ G G QR+ KR RT Q+ MKS F + P + L + GL
Sbjct: 1099 ASPSATGVGCFGAQRSPASSKRYRTHLTPLQVHVMKSIFMSYKTPSMNECDLLGAEIGLH 1158
Query: 76 KRVLQ 80
KRV+Q
Sbjct: 1159 KRVVQ 1163
>gi|326925561|ref|XP_003208981.1| PREDICTED: LIM/homeobox protein Lhx8-like [Meleagris gallopavo]
Length = 290
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 17 ESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQ 70
E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L++LA+
Sbjct: 136 ENGNGVSVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAE 194
>gi|155970302|gb|ABU41808.1| PROP1 [Bos taurus]
gi|155970304|gb|ABU41809.1| PROP1 [Bos taurus]
gi|155970306|gb|ABU41810.1| PROP1 [Bos taurus]
gi|155970308|gb|ABU41811.1| PROP1 [Bos taurus]
gi|155970310|gb|ABU41812.1| PROP1 [Bos taurus]
gi|155970312|gb|ABU41813.1| PROP1 [Bos taurus]
gi|155970314|gb|ABU41814.1| PROP1 [Bos taurus]
gi|155970316|gb|ABU41815.1| PROP1 [Bos taurus]
gi|155970318|gb|ABU41816.1| PROP1 [Bos taurus]
gi|155970320|gb|ABU41817.1| PROP1 [Bos taurus]
gi|155970322|gb|ABU41818.1| PROP1 [Bos taurus]
gi|155970324|gb|ABU41819.1| PROP1 [Bos taurus]
gi|155970326|gb|ABU41820.1| PROP1 [Bos taurus]
gi|155970328|gb|ABU41821.1| PROP1 [Bos taurus]
gi|155970330|gb|ABU41822.1| PROP1 [Bos taurus]
gi|155970332|gb|ABU41823.1| PROP1 [Bos taurus]
gi|155970334|gb|ABU41824.1| PROP1 [Bos taurus]
gi|155970336|gb|ABU41825.1| PROP1 [Bos taurus]
Length = 114
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQ 114
>gi|395513919|ref|XP_003761169.1| PREDICTED: LIM/homeobox protein Lhx5 [Sarcophilus harrisii]
Length = 383
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 190 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 237
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|449477358|ref|XP_004176635.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Taeniopygia guttata]
Length = 328
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 108 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 155
>gi|167540506|gb|ABZ81933.1| prophet of POU1F1 [Ovis aries]
gi|167540508|gb|ABZ81934.1| prophet of POU1F1 [Ovis aries]
gi|167540510|gb|ABZ81935.1| prophet of POU1F1 [Ovis aries]
gi|167540512|gb|ABZ81936.1| prophet of POU1F1 [Ovis aries]
Length = 114
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPAQLEQLESAFGKNQYPDIWARESLAQDTGLSEARIQ 114
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|440898042|gb|ELR49620.1| Homeobox protein prophet of Pit-1 [Bos grunniens mutus]
Length = 223
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQ 114
>gi|20502815|gb|AAM22641.1| prophet of Pit-1 [Bos taurus]
Length = 226
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQ 114
>gi|371573884|gb|AEX38312.1| Lhx1 [Mnemiopsis leidyi]
Length = 424
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 14 LSYESGAGNSSPGSGVHSHQ-----------RTKRMRTSFKHHQLRTMKSYFNINQNPDA 62
L E G S GV+S + + + RT+ K QL +K+ F NQ P
Sbjct: 214 LKVEGGVSESCSDQGVNSPETSNSQVSTTTGKRRGPRTTIKSKQLDILKAAFKSNQKPTR 273
Query: 63 KDLKQLAQKTGLSKRVLQ 80
+QLA +TGL+ RV+Q
Sbjct: 274 NIREQLATETGLNMRVIQ 291
>gi|332250744|ref|XP_003274511.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Nomascus
leucogenys]
Length = 323
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 99 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 146
>gi|20502811|gb|AAM22639.1|AF453510_1 prophet of Pit-1 [Bos taurus]
gi|296485511|tpg|DAA27626.1| TPA: homeobox protein prophet of Pit-1 [Bos taurus]
Length = 226
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQ 114
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like [Sus
scrofa]
Length = 402
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|196013287|ref|XP_002116505.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
gi|190581096|gb|EDV21175.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
Length = 265
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL+T++SY+ N PD+ ++L + TGL+ RV++
Sbjct: 185 RIRTVLNEKQLQTLRSYYASNPRPDSTVKEKLVELTGLNPRVIR 228
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|27807225|ref|NP_777103.1| homeobox protein prophet of Pit-1 [Bos taurus]
gi|42559484|sp|Q8MJI9.1|PROP1_BOVIN RecName: Full=Homeobox protein prophet of Pit-1; Short=PROP-1;
AltName: Full=Pituitary-specific homeodomain factor
gi|20502813|gb|AAM22640.1|AF453511_1 prophet of Pit-1 [Bos taurus]
Length = 226
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQ 114
>gi|347963079|ref|XP_001687756.2| AGAP000058-PA [Anopheles gambiae str. PEST]
gi|333467370|gb|EDO64361.2| AGAP000058-PA [Anopheles gambiae str. PEST]
Length = 2789
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR ++S+F+IN +P + +++++ K L ++V++
Sbjct: 2287 KRARTRITDEQLRILRSHFDINNSPSEESIQEMSLKANLPQKVVK 2331
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|380806935|gb|AFE75343.1| zinc finger homeobox protein 3 isoform B, partial [Macaca mulatta]
Length = 289
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG+ S SG Q KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 222 SGSAGKSGDSGDRPGQ--KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 279
Query: 78 VLQ 80
V+Q
Sbjct: 280 VVQ 282
>gi|449479889|ref|XP_004177057.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Taeniopygia guttata]
Length = 419
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|17508249|ref|NP_491668.1| Protein LIM-7 [Caenorhabditis elegans]
gi|1658400|gb|AAB18328.1| CeLIM-7, partial [Caenorhabditis elegans]
gi|351020974|emb|CCD62964.1| Protein LIM-7 [Caenorhabditis elegans]
Length = 452
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ R+RT +QL+ ++ ++IN PDA ++L + TGLS RV++
Sbjct: 263 KQATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIR 310
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|289541370|gb|ADD09808.1| LIM-homeodomain transcription factor islet protein [Branchiostoma
belcheri]
Length = 250
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 145 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 188
>gi|119586549|gb|EAW66145.1| zinc finger homeobox 2, isoform CRA_d [Homo sapiens]
Length = 2706
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1990 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 2036
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2200 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2244
>gi|52355818|gb|AAH82769.1| Zfhx3 protein [Mus musculus]
Length = 948
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG G PG KR RT + QL+ +KS FN + P + + L GL KR
Sbjct: 167 SGDGGDRPGQ--------KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKR 218
Query: 78 VLQ 80
V+Q
Sbjct: 219 VVQ 221
>gi|312377228|gb|EFR24112.1| hypothetical protein AND_11538 [Anopheles darlingi]
Length = 1594
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT QLR ++S+F+IN +P + +++++ K L ++V++
Sbjct: 1072 KRARTRITDEQLRILRSHFDINNSPSEESIQEMSIKANLPQKVVK 1116
>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
Length = 481
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+S PG + QR R RT+F HQL ++ F Q PD ++LAQ+T L++ +Q
Sbjct: 119 DSEPGITLKRKQR--RSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQ 175
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
Q+ + RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 144 QKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 191
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|351697123|gb|EHB00042.1| Homeobox protein prophet of Pit-1, partial [Heterocephalus glaber]
Length = 114
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Query: 4 SGDLSSSMESLSYESGAGNSSPGSGV-----------HSHQRTKRM-RTSFKHHQLRTMK 51
+G L+S+ ++ + G PG GV + R++R RT+F QL ++
Sbjct: 29 AGPLASTADARAQPCG----RPGPGVGRPRLPRQGGHRAPPRSRRRHRTTFSPAQLEQLE 84
Query: 52 SYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S F NQ PD + LA+ TGLS+ +Q
Sbjct: 85 SAFGGNQYPDIWAREGLARDTGLSEARIQ 113
>gi|126277446|ref|XP_001369416.1| PREDICTED: zinc finger homeobox protein 2 [Monodelphis domestica]
Length = 2563
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
S G+ + G G R KR+RT+ QL + ++ + NP K L ++++ GL KR
Sbjct: 1840 SPTGSEAGGPGDGEPPRDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKR 1899
Query: 78 VLQ 80
V+Q
Sbjct: 1900 VVQ 1902
>gi|383852872|ref|XP_003701949.1| PREDICTED: protein gooseberry-neuro-like, partial [Megachile
rotundata]
Length = 398
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 23 SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S PG + QR R RT+F QL +++ F+ Q PD ++LAQKT L++ +Q
Sbjct: 171 SEPGIALKRKQR--RSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKTNLTEARVQ 226
>gi|380027472|ref|XP_003697447.1| PREDICTED: protein gooseberry-like [Apis florea]
Length = 405
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 23 SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S PG + QR R RT+F QL +++ F+ Q PD ++LAQKT L++ +Q
Sbjct: 178 SEPGIALKRKQR--RSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKTNLTEARVQ 233
>gi|57526306|ref|NP_001009767.1| homeobox protein prophet of Pit-1 [Ovis aries]
gi|46811862|gb|AAT02183.1| prophet of Pit-1 [Ovis aries]
gi|46811864|gb|AAT02184.1| prophet of Pit-1 [Ovis aries]
Length = 226
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPAQLEQLESAFGKNQYPDIWARESLAQDTGLSEARIQ 114
>gi|32402495|gb|AAP79290.2| lim 1/5 [Saccoglossus kowalevskii]
Length = 406
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 173 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 220
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|328778292|ref|XP_394847.4| PREDICTED: protein gooseberry-like [Apis mellifera]
Length = 426
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 23 SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S PG + QR R RT+F QL +++ F+ Q PD ++LAQKT L++ +Q
Sbjct: 199 SEPGIALKRKQR--RSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKTNLTEARVQ 254
>gi|395859307|ref|XP_003801981.1| PREDICTED: zinc finger homeobox protein 2 [Otolemur garnettii]
Length = 2570
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1854 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1900
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2064 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2108
>gi|327287892|ref|XP_003228662.1| PREDICTED: zinc finger homeobox protein 2-like [Anolis carolinensis]
Length = 2589
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 66
SS+ S + + G+G G+H +R RT QL+ MK+ + + P ++ +
Sbjct: 2139 FSSNRRSRAVDGGSG------GMHDSLGQRRYRTQMSSIQLKIMKACYEAYRTPTMQECE 2192
Query: 67 QLAQKTGLSKRVLQ 80
L ++ GL KRV+Q
Sbjct: 2193 VLGEEIGLPKRVIQ 2206
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
+G+ +S G R KR+RT+ QL + ++ + NP K L ++++ GL KR
Sbjct: 1961 TGSECASMAGGDSEPPRDKRLRTTILPEQLEILFRWYMQDSNPTRKMLDCISEEVGLKKR 2020
Query: 78 VLQ 80
V+Q
Sbjct: 2021 VVQ 2023
>gi|322789291|gb|EFZ14611.1| hypothetical protein SINV_09376 [Solenopsis invicta]
Length = 113
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL T+++ + N PDA +QL + TGLS RV++
Sbjct: 36 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 79
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 2 LHSGDLSSSMES------LSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFN 55
L++GD ME YE A S + Q KR RT+ QL T+K+ +N
Sbjct: 195 LNTGDEFYLMEDRKLVCKPDYE--AAKSKAAECLDGDQPNKRPRTTITAKQLETLKNAYN 252
Query: 56 INQNPDAKDLKQLAQKTGLSKRVLQ 80
+ P +QL+Q TGL RV+Q
Sbjct: 253 NSPKPARHVREQLSQDTGLDMRVVQ 277
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 14 LSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
LS + GN + G +R R T+ K QL T+K+ F P +QL+Q+TG
Sbjct: 158 LSDKDACGNENDEQGAVGKRRGPR--TTIKAKQLETLKAAFAATPKPTRHIREQLSQETG 215
Query: 74 LSKRVLQ 80
L+ RV+Q
Sbjct: 216 LNMRVIQ 222
>gi|350420704|ref|XP_003492596.1| PREDICTED: protein gooseberry-like [Bombus impatiens]
Length = 404
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 23 SSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S PG + QR R RT+F QL +++ F+ Q PD ++LAQKT L++ +Q
Sbjct: 177 SEPGIALKRKQR--RSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKTNLTEARVQ 232
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT+ QL T+KS +N + P +QL+Q TGL RV+Q
Sbjct: 311 KRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQ 355
>gi|348577518|ref|XP_003474531.1| PREDICTED: zinc finger homeobox protein 2-like [Cavia porcellus]
Length = 2570
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1854 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1900
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2064 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2108
>gi|322800793|gb|EFZ21669.1| hypothetical protein SINV_02847 [Solenopsis invicta]
Length = 299
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 28 GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
G+ ++ +R RT+F QL +++ F Q PD ++LAQ+TGL++ +Q
Sbjct: 25 GIPLKRKQRRSRTTFSGEQLEMLETAFQRAQYPDVYAREELAQRTGLTEARIQ 77
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1 [Nomascus
leucogenys]
Length = 374
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|402875735|ref|XP_003901651.1| PREDICTED: zinc finger homeobox protein 2 [Papio anubis]
Length = 2571
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1855 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1901
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2065 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2109
>gi|327284692|ref|XP_003227070.1| PREDICTED: LIM/homeobox protein Lhx1-like [Anolis carolinensis]
Length = 372
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 149 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 190
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 2 LHSGDLSSSMES------LSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFN 55
L++GD ME YE A S + Q KR RT+ QL T+K+ +N
Sbjct: 162 LNTGDEFYLMEDRKLVCKPDYE--AAKSKAAECLDGDQPNKRPRTTITAKQLETLKNAYN 219
Query: 56 INQNPDAKDLKQLAQKTGLSKRVLQ 80
+ P +QL+Q TGL RV+Q
Sbjct: 220 NSPKPARHVREQLSQDTGLDMRVVQ 244
>gi|351697113|gb|EHB00032.1| Zinc finger homeobox protein 2 [Heterocephalus glaber]
Length = 2559
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1843 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1889
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2052 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2096
>gi|308461174|ref|XP_003092882.1| CRE-LIM-7 protein [Caenorhabditis remanei]
gi|308252088|gb|EFO96040.1| CRE-LIM-7 protein [Caenorhabditis remanei]
Length = 462
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
++ R+RT QL+ +K ++ N PDA ++L + TGL+ RV++
Sbjct: 274 KQATRVRTVLNEQQLKILKDCYSCNSRPDASLKEKLVEMTGLNARVIR 321
>gi|306922394|ref|NP_207646.2| zinc finger homeobox protein 2 [Homo sapiens]
gi|300669698|sp|Q9C0A1.3|ZFHX2_HUMAN RecName: Full=Zinc finger homeobox protein 2; AltName: Full=Zinc
finger homeodomain protein 2; Short=ZFH-2
Length = 2572
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1856 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1902
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2066 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2110
>gi|426376465|ref|XP_004055021.1| PREDICTED: zinc finger homeobox protein 2 [Gorilla gorilla gorilla]
Length = 2572
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1856 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1902
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2066 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2110
>gi|324515845|gb|ADY46335.1| Homeobox protein unc-30 [Ascaris suum]
Length = 334
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 16 YESGAGNS--------SPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQ 67
YE A N+ SP + + S+Q+ +R RT F HQL ++++F+ N+ PD ++
Sbjct: 112 YEVNASNADNDQNSAGSPETCLISNQKPRRQRTHFTSHQLTELENWFSRNRYPDMATREE 171
Query: 68 LAQKTGLSK 76
+A L++
Sbjct: 172 IALWISLTE 180
>gi|307189640|gb|EFN73978.1| Protein gooseberry-neuro [Camponotus floridanus]
Length = 321
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
S PG + QR R RT+F QL +++ F Q PD ++LAQ+TGL++ +Q
Sbjct: 52 ESEPGIPLKRKQR--RSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQ 108
>gi|197282004|gb|ACH57181.1| Lim/Isl [Trichoplax adhaerens]
Length = 60
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 37 RMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R+RT QL+T++SY+ N PD+ ++L + TGL+ RV++
Sbjct: 3 RIRTVLNEKQLQTLRSYYASNPRPDSTVKEKLVELTGLNPRVIR 46
>gi|410048146|ref|XP_003952516.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 2 [Pan
troglodytes]
Length = 2503
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1856 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1902
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P + + L ++ GL KRV+Q
Sbjct: 2066 RRYRTQMSSLQLKIMKACYEAYRTPTMHECEVLGEEIGLPKRVIQ 2110
>gi|395745716|ref|XP_003778320.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 2 [Pongo
abelii]
Length = 2509
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1856 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1902
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2066 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2110
>gi|389567384|gb|AFK84416.1| paired-like homeobox protein manacle, partial [Ectopleura larynx]
Length = 72
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R+RT+F HHQL T++ F + PD ++LA TGL++ +Q
Sbjct: 12 RRVRTAFTHHQLTTLEQTFETSHYPDVVLRERLATYTGLAESRIQ 56
>gi|351696664|gb|EHA99582.1| LIM/homeobox protein Lhx1 [Heterocephalus glaber]
Length = 406
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 14 LSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTG 73
LS + GN + G +R R T+ K QL T+K+ F P +QL+Q+TG
Sbjct: 151 LSDKDACGNENDEQGAVGKRRGPR--TTIKAKQLETLKAAFAATPKPTRHIREQLSQETG 208
Query: 74 LSKRVLQ 80
L+ RV+Q
Sbjct: 209 LNMRVIQ 215
>gi|326931564|ref|XP_003211898.1| PREDICTED: LIM/homeobox protein Lhx1-like [Meleagris gallopavo]
Length = 222
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 131 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 172
>gi|441667073|ref|XP_003260994.2| PREDICTED: zinc finger homeobox protein 2 [Nomascus leucogenys]
Length = 2571
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1855 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1901
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2065 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2109
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|403264140|ref|XP_003924349.1| PREDICTED: zinc finger homeobox protein 2 [Saimiri boliviensis
boliviensis]
Length = 2571
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1855 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1901
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2065 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2109
>gi|395853430|ref|XP_003799213.1| PREDICTED: homeobox protein prophet of Pit-1-like [Otolemur
garnettii]
Length = 226
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT+F QL ++S F NQ PD + LAQ TGLS+ +Q
Sbjct: 70 RRHRTTFSPVQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQ 114
>gi|195565819|ref|XP_002106496.1| Lim1 [Drosophila simulans]
gi|194203872|gb|EDX17448.1| Lim1 [Drosophila simulans]
Length = 345
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP S +R R T+ K QL +K+ FN P +QLA++TGL
Sbjct: 73 DSQAENKSPDDANGSKRRGPR--TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPM 130
Query: 77 RVLQ 80
RV+Q
Sbjct: 131 RVIQ 134
>gi|328782878|ref|XP_003250208.1| PREDICTED: paired box protein Pax-3-B [Apis mellifera]
Length = 531
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 19 GAGNSSPGS------GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKT 72
G G +S GS G+ ++ +R RT+F HQL ++ F Q PD ++LAQ+T
Sbjct: 195 GDGKTSSGSDCDSEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRT 254
Query: 73 GLSKRVLQ 80
L++ +Q
Sbjct: 255 KLTEARIQ 262
>gi|46394864|gb|AAS91588.1| Lim1 [Oryctolagus cuniculus]
Length = 348
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 126 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 167
>gi|449282069|gb|EMC88978.1| LIM/homeobox protein Lhx1 [Columba livia]
Length = 400
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 219
>gi|397473251|ref|XP_003808129.1| PREDICTED: zinc finger homeobox protein 2 [Pan paniscus]
Length = 2571
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1855 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1901
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2065 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2109
>gi|344298639|ref|XP_003420999.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 2-like
[Loxodonta africana]
Length = 2569
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1855 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1901
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2063 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2107
>gi|380021136|ref|XP_003694430.1| PREDICTED: uncharacterized protein LOC100866617 [Apis florea]
Length = 388
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 22 NSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+S PG + QR R RT+F HQL ++ F Q PD ++LAQ+T L++ +Q
Sbjct: 63 DSEPGIPLKRKQR--RSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 119
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|291232097|ref|XP_002736028.1| PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]
Length = 498
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 265 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 312
>gi|390468947|ref|XP_003734031.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 2-like
[Callithrix jacchus]
Length = 2487
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 34 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
R KR+RT+ QL + ++ + NP K L ++++ GL KRV+Q
Sbjct: 1900 RDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQ 1946
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+R RT QL+ MK+ + + P ++ + L ++ GL KRV+Q
Sbjct: 2110 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQ 2154
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT+ QL T+KS +N + P +QL+Q TGL RV+Q
Sbjct: 199 KRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQ 243
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|383854529|ref|XP_003702773.1| PREDICTED: paired box protein Pax-3-B-like [Megachile rotundata]
Length = 483
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 19 GAGNSSPGS------GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKT 72
G G +S GS G+ ++ +R RT+F HQL ++ F Q PD ++LAQ+T
Sbjct: 147 GDGKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRT 206
Query: 73 GLSKRVLQ 80
L++ +Q
Sbjct: 207 KLTEARIQ 214
>gi|345498243|ref|XP_001606522.2| PREDICTED: hypothetical protein LOC100122913 [Nasonia vitripennis]
Length = 422
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 18 SGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKR 77
SG G S GSG + QR R RT+F QL ++ F+ PDA ++L+Q+ GLS+
Sbjct: 218 SGNGRSGAGSGGNGKQR--RSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEA 275
Query: 78 VLQ 80
+Q
Sbjct: 276 RVQ 278
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 36 KRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
KR RT+ QL T+KS +N + P +QL+Q TGL RV+Q
Sbjct: 199 KRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQ 243
>gi|393908929|gb|EJD75252.1| transcription factor protein [Loa loa]
Length = 594
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 33 QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
+++ R+RT QL T+K+ + N PDA + L + TGLS RV++
Sbjct: 382 KQSTRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIR 429
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 39 RTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP S +R R T+ K QL +K+ FN P +QLA++TGL
Sbjct: 231 DSQAENKSPDDANGSKRRGPR--TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPM 288
Query: 77 RVLQ 80
RV+Q
Sbjct: 289 RVIQ 292
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP S +R R T+ K QL +K+ FN P +QLA++TGL
Sbjct: 231 DSQAENKSPDDANGSKRRGPR--TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPM 288
Query: 77 RVLQ 80
RV+Q
Sbjct: 289 RVIQ 292
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP S +R R T+ K QL +K+ FN P +QLA++TGL
Sbjct: 231 DSQAENKSPDDANGSKRRGPR--TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPM 288
Query: 77 RVLQ 80
RV+Q
Sbjct: 289 RVIQ 292
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP S +R R T+ K QL +K+ FN P +QLA++TGL
Sbjct: 231 DSQAENKSPDDANGSKRRGPR--TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPM 288
Query: 77 RVLQ 80
RV+Q
Sbjct: 289 RVIQ 292
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 35 TKR--MRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 80
TKR RT+ K QL T+K+ F P +QLAQ+TGL+ RV+Q
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 17 ESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSK 76
+S A N SP S +R R T+ K QL +K+ FN P +QLA++TGL
Sbjct: 231 DSQAENKSPDDANGSKRRGPR--TTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPM 288
Query: 77 RVLQ 80
RV+Q
Sbjct: 289 RVIQ 292
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.122 0.334
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,173,541,392
Number of Sequences: 23463169
Number of extensions: 37139223
Number of successful extensions: 106482
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 299
Number of HSP's that attempted gapping in prelim test: 104273
Number of HSP's gapped (non-prelim): 2472
length of query: 80
length of database: 8,064,228,071
effective HSP length: 51
effective length of query: 29
effective length of database: 6,867,606,452
effective search space: 199160587108
effective search space used: 199160587108
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)