Diaphorina citri psyllid: psy4349

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ
cccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccc
******************************************KHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVL*
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MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
LIM/homeobox protein Lhx2 Acts as a transcriptional activator. Stimulates the promoter of the alpha-glycoprotein gene. Transcriptional regulatory protein involved in the control of cell differentiation in developing lymphoid and neural cell types.confidentQ9Z0S2
LIM/homeobox protein Lhx2 Acts as a transcriptional activator. Stimulates the promoter of the alpha-glycoprotein gene. Transcriptional regulatory protein involved in the control of cell differentiation in developing lymphoid and neural cell types.confidentP50458
Protein apterous Required for the normal development of the wing and halter imaginal disks.confidentP29673

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005488 [MF]bindingconfidentGO:0003674
GO:0048731 [BP]system developmentconfidentGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0007275, GO:0044699
GO:0006355 [BP]regulation of transcription, DNA-dependentconfidentGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0000977 [MF]RNA polymerase II regulatory region sequence-specific DNA bindingprobableGO:0043565, GO:0044212, GO:0001067, GO:0003677, GO:0001012, GO:0000976, GO:0005488, GO:0003676, GO:0000975, GO:0003674, GO:0097159, GO:1901363
GO:0008283 [BP]cell proliferationprobableGO:0008150, GO:0044699
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0008045 [BP]motor neuron axon guidanceprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0007411, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0048858, GO:0040011, GO:0048699, GO:0032990, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0044763
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityprobableGO:0003674, GO:0001071
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0008585 [BP]female gonad developmentprobableGO:0032502, GO:0007548, GO:0032501, GO:0048608, GO:0000003, GO:0044707, GO:0022414, GO:0061458, GO:0048856, GO:0008406, GO:0045137, GO:0044767, GO:0003006, GO:0048513, GO:0008150, GO:0048731, GO:0046545, GO:0046660, GO:0007275, GO:0044699
GO:0008584 [BP]male gonad developmentprobableGO:0032502, GO:0022414, GO:0007548, GO:0032501, GO:0048608, GO:0000003, GO:0044707, GO:0046546, GO:0061458, GO:0048856, GO:0008406, GO:0045137, GO:0007275, GO:0044767, GO:0003006, GO:0048513, GO:0008150, GO:0048731, GO:0046661, GO:0044699
GO:0035262 [BP]gonad morphogenesisprobableGO:0032502, GO:0009887, GO:0032501, GO:0048608, GO:0000003, GO:0044707, GO:0022414, GO:0061458, GO:0048856, GO:0008406, GO:0007548, GO:0045137, GO:0044767, GO:0003006, GO:0048513, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0003714 [MF]transcription corepressor activityprobableGO:0003674, GO:0003712, GO:0000989, GO:0000988
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0045892 [BP]negative regulation of transcription, DNA-dependentprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0010558, GO:0048523
GO:0045944 [BP]positive regulation of transcription from RNA polymerase II promoterprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0045893, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0048522
GO:0007526 [BP]larval somatic muscle developmentprobableGO:0032502, GO:0009791, GO:0032501, GO:0044707, GO:0048569, GO:0048856, GO:0007275, GO:0044767, GO:0048513, GO:0002164, GO:0008150, GO:0061061, GO:0048731, GO:0007525, GO:0044699
GO:2000678 [BP]negative regulation of transcription regulatory region DNA bindingprobableGO:0051098, GO:0051101, GO:0051100, GO:2000677, GO:0065007, GO:0043392, GO:0044092, GO:0008150, GO:0065009
GO:0007498 [BP]mesoderm developmentprobableGO:0032502, GO:0048856, GO:0008150, GO:0009888
GO:0022401 [BP]negative adaptation of signaling pathwayprobableGO:0009968, GO:0009966, GO:0048585, GO:0048583, GO:0048519, GO:0050794, GO:0008150, GO:0023057, GO:0065007, GO:0010648, GO:0023051, GO:0048523, GO:0010646, GO:0050789, GO:0023058
GO:0008355 [BP]olfactory learningprobableGO:0032501, GO:0007635, GO:0044707, GO:0042048, GO:0044708, GO:0050896, GO:0007612, GO:0007610, GO:0007611, GO:0008306, GO:0008150, GO:0050890, GO:0050877, GO:0042221, GO:0044699, GO:0003008
GO:0007479 [BP]leg disc proximal/distal pattern formationprobableGO:0032502, GO:0007389, GO:0009954, GO:0007447, GO:0044707, GO:0007444, GO:0032501, GO:0007449, GO:0048856, GO:0035223, GO:0035218, GO:0044767, GO:0048513, GO:0008150, GO:0003002, GO:0048731, GO:0007275, GO:0044699
GO:0007476 [BP]imaginal disc-derived wing morphogenesisprobableGO:0048563, GO:0048569, GO:0035107, GO:0009887, GO:0035220, GO:0009791, GO:0035120, GO:0002165, GO:0032501, GO:0009653, GO:0007275, GO:0044699, GO:0007472, GO:0007552, GO:0048513, GO:0032502, GO:0048707, GO:0009886, GO:0035114, GO:0008150, GO:0044767, GO:0044707, GO:0007444, GO:0048856, GO:0007560, GO:0048731, GO:0048736, GO:0048737
GO:0045664 [BP]regulation of neuron differentiationprobableGO:0030154, GO:0007275, GO:0044699, GO:0050767, GO:0048869, GO:0060284, GO:0050789, GO:0008150, GO:0065007, GO:0032502, GO:0032501, GO:0050793, GO:0009987, GO:0050794, GO:0045595, GO:0044763, GO:0051239, GO:0022008, GO:0048699, GO:0007399, GO:0044707, GO:0048856, GO:0051960, GO:2000026, GO:0048731
GO:0031290 [BP]retinal ganglion cell axon guidanceprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0007411, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0048858, GO:0040011, GO:0048699, GO:0032990, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0044763
GO:0043010 [BP]camera-type eye developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007423, GO:0048856, GO:0044767, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0021554 [BP]optic nerve developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0048731, GO:0044767, GO:0008150, GO:0021545, GO:0021675, GO:0007275, GO:0044699
GO:0021884 [BP]forebrain neuron developmentprobableGO:0032502, GO:0044707, GO:0030154, GO:0048468, GO:0007275, GO:0044699, GO:0007417, GO:0048869, GO:0008150, GO:0048513, GO:0021879, GO:0021954, GO:0021872, GO:0021953, GO:0048666, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0022008, GO:0048699, GO:0007420, GO:0007399, GO:0048856, GO:0030900, GO:0048731
GO:0036011 [BP]imaginal disc-derived leg segmentationprobableGO:0048563, GO:0035108, GO:0048569, GO:0060173, GO:0035107, GO:0009887, GO:0009791, GO:0035120, GO:0002165, GO:0032501, GO:0035127, GO:0035282, GO:0009653, GO:0035285, GO:0044699, GO:0007389, GO:0007478, GO:0007552, GO:0007275, GO:0048513, GO:0048646, GO:0032502, GO:0048707, GO:0009886, GO:0007480, GO:0035218, GO:0044767, GO:0008150, GO:0003002, GO:0035114, GO:0044707, GO:0007444, GO:0048856, GO:0007560, GO:0048731, GO:0048736, GO:0048737
GO:0021522 [BP]spinal cord motor neuron differentiationprobableGO:0032502, GO:0032501, GO:0048699, GO:0048856, GO:0007399, GO:0030182, GO:0021515, GO:0048869, GO:0021517, GO:0030154, GO:0021510, GO:0008150, GO:0009987, GO:0044763, GO:0044699, GO:0044707, GO:0048731, GO:0022008, GO:0007275, GO:0021953, GO:0007417
GO:0040024 [BP]dauer larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0002119, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0006351 [BP]transcription, DNA-dependentprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0019438
GO:0007451 [BP]dorsal/ventral lineage restriction, imaginal discprobableGO:0032502, GO:0007389, GO:0032501, GO:0009953, GO:0044707, GO:0007444, GO:0007450, GO:0048856, GO:0035161, GO:0044767, GO:0048513, GO:0008150, GO:0003002, GO:0048731, GO:0007447, GO:0007275, GO:0044699
GO:0071632 [BP]optomotor responseprobableGO:0009628, GO:0007632, GO:0032501, GO:0007634, GO:0044704, GO:0044707, GO:0019098, GO:0009314, GO:0050896, GO:0007610, GO:0022414, GO:0044702, GO:0009416, GO:0044708, GO:0008150, GO:0044699, GO:0000003
GO:0001076 [MF]RNA polymerase II transcription factor binding transcription factor activityprobableGO:0003674, GO:0000989, GO:0000988
GO:0021978 [BP]telencephalon regionalizationprobableGO:0021537, GO:0007389, GO:0032501, GO:0007420, GO:0044707, GO:0008150, GO:0048856, GO:0007399, GO:0032502, GO:0048513, GO:0030900, GO:0003002, GO:0048731, GO:0044767, GO:0007417, GO:0007275, GO:0044699, GO:0021871
GO:0001843 [BP]neural tube closureprobableGO:0032502, GO:0016331, GO:0035148, GO:0009790, GO:0072175, GO:0009792, GO:0021915, GO:0009653, GO:0007275, GO:0044699, GO:0002009, GO:0048729, GO:0001841, GO:0060562, GO:0043009, GO:0048646, GO:0048598, GO:0032501, GO:0035239, GO:0060429, GO:0009888, GO:0060606, GO:0008150, GO:0035295, GO:0001838, GO:0014020, GO:0044707, GO:0007399, GO:0048856, GO:0044767, GO:0048731
GO:0007559 [BP]histolysisprobableGO:0010259, GO:0032502, GO:0016271, GO:0048856, GO:0009888, GO:0008150, GO:0044699
GO:0045165 [BP]cell fate commitmentprobableGO:0032502, GO:0030154, GO:0048869, GO:0009987, GO:0044763, GO:0008150, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DMQ, chain A
Confidence level:very confident
Coverage over the Query: 32-80
View the alignment between query and template
View the model in PyMOL