BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4350
(107 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242023961|ref|XP_002432399.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
gi|212517822|gb|EEB19661.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
Length = 383
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 12/86 (13%)
Query: 1 MLKDRD------DSSSPCPEEKSS------CGGCGQPIIDRFYLLAVDRQWHLGCLQCAH 48
MLKDRD ++SPCP S C GCG I+DR+YLLAVDRQWH CL+C
Sbjct: 1 MLKDRDAMGPVARAASPCPSGGESASCPTACAGCGGRILDRYYLLAVDRQWHSPCLKCTE 60
Query: 49 CHVPLHSELSCFSRHGNIYCKQDFFR 74
C PL +EL+CF+R GNIYCK+D++R
Sbjct: 61 CKSPLDTELTCFARDGNIYCKEDYYR 86
>gi|241753309|ref|XP_002401118.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215508343|gb|EEC17797.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 357
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 4 DRDDSSS----PCPEEKSS-------CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVP 52
D DDSS+ P P +S C CG PI DRFYLLAV+RQWH CL+C HC
Sbjct: 12 DPDDSSTQSLRPSPGSAASPPATAKLCAACGAPIADRFYLLAVERQWHTHCLRCCHCKQQ 71
Query: 53 LHSELSCFSRHGNIYCKQDFFRYSQARYPDLP 84
L SEL+CF+R GNIYCK+D++ +RYP LP
Sbjct: 72 LDSELTCFARDGNIYCKEDYY----SRYPRLP 99
>gi|357622661|gb|EHJ74087.1| apterous [Danaus plexippus]
Length = 359
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 1 MLKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
MLK+R+ SS P C GCG I DR+YLLAVDRQWH CL+C C +PL SEL+CF
Sbjct: 1 MLKERE-SSEGSPATPDECAGCGGRIQDRYYLLAVDRQWHGACLRCCECRLPLDSELTCF 59
Query: 61 SRHGNIYCKQDFFR 74
SR GNIYCK D++R
Sbjct: 60 SRDGNIYCKDDYYR 73
>gi|328925124|dbj|BAK19077.1| apterous B alpha [Bombyx mori]
Length = 349
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 1 MLKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
MLK+R+ SS P C GCG I DR+YLLAVDRQWH CL+C C +PL +EL+CF
Sbjct: 1 MLKERE-SSEGSPGAPDECAGCGGKIQDRYYLLAVDRQWHGSCLRCCECRLPLDTELTCF 59
Query: 61 SRHGNIYCKQDFFR 74
SR GNIYCK+D++R
Sbjct: 60 SRDGNIYCKEDYYR 73
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 3/65 (4%)
Query: 13 PEEKSS---CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
PE+ S+ C GCG+ I DRFYL AVD WH+GCLQCA C +PL +EL+C+SRHGNIYCK
Sbjct: 14 PEDGSNGACCAGCGRSIDDRFYLSAVDMCWHIGCLQCAECKLPLDTELTCYSRHGNIYCK 73
Query: 70 QDFFR 74
QD++R
Sbjct: 74 QDYYR 78
>gi|345132129|gb|AEN75257.1| apterous [Neanthes arenaceodentata]
Length = 420
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 50/60 (83%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E + C GCG IIDR+YLLAVD+QWH+ CL+CA CH+PL SEL+CF++ G I+CK+D++R
Sbjct: 57 EPAPCAGCGGKIIDRYYLLAVDKQWHINCLKCADCHLPLDSELTCFAKDGEIFCKEDYYR 116
>gi|143347140|gb|ABO93218.1| Lhx2 [Platynereis dumerilii]
Length = 280
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E + C CG IIDR+YLLAVD+QWH+ CL+CA CH+PL SEL+CF++ G+IYCK+D++R
Sbjct: 45 EPAPCAACGGKIIDRYYLLAVDKQWHINCLKCADCHLPLDSELTCFAKDGDIYCKEDYYR 104
Query: 75 YSQAR 79
A+
Sbjct: 105 RFAAK 109
>gi|225543484|ref|NP_001139388.1| apterous [Tribolium castaneum]
gi|224459214|gb|ACN43342.1| apterous b [Tribolium castaneum]
Length = 361
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 11/85 (12%)
Query: 1 MLKDRDDS----SSPCPE-------EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHC 49
MLK+R+ SSPC + ++C GCG I DR+YLLAVDRQWH CL+C C
Sbjct: 1 MLKERESIERAISSPCSSLGGSSTLDGTTCAGCGGRIQDRYYLLAVDRQWHASCLKCCEC 60
Query: 50 HVPLHSELSCFSRHGNIYCKQDFFR 74
+PL +EL+CF+R GNIYCK+D++R
Sbjct: 61 KLPLDTELTCFARDGNIYCKEDYYR 85
>gi|148224455|ref|NP_001087527.1| LIM/homeobox protein Lhx9 [Xenopus laevis]
gi|82198794|sp|Q68EY3.1|LHX9_XENLA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|51258697|gb|AAH80067.1| Lhx9 protein [Xenopus laevis]
Length = 331
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 67 PEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDY 126
Query: 73 FRYSQAR 79
+R+S R
Sbjct: 127 YRFSVKR 133
>gi|410929509|ref|XP_003978142.1| PREDICTED: LIM/homeobox protein Lhx2-like [Takifugu rubripes]
Length = 417
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCP----EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
D +S +P P E + C GCG+ I+DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 55 DMGESETPLPCLTGERVALCAGCGRKIVDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 114
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 115 FSKDGSIYCKEDYYR 129
>gi|348536385|ref|XP_003455677.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Oreochromis
niloticus]
Length = 320
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 53/70 (75%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 64 SMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 123
Query: 70 QDFFRYSQAR 79
+D++R+S R
Sbjct: 124 EDYYRFSVQR 133
>gi|270004609|gb|EFA01057.1| hypothetical protein TcasGA2_TC003974 [Tribolium castaneum]
Length = 218
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 11/85 (12%)
Query: 1 MLKDRDDS----SSPCPE-------EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHC 49
MLK+R+ SSPC + ++C GCG I DR+YLLAVDRQWH CL+C C
Sbjct: 1 MLKERESIERAISSPCSSLGGSSTLDGTTCAGCGGRIQDRYYLLAVDRQWHASCLKCCEC 60
Query: 50 HVPLHSELSCFSRHGNIYCKQDFFR 74
+PL +EL+CF+R GNIYCK+D++R
Sbjct: 61 KLPLDTELTCFARDGNIYCKEDYYR 85
>gi|328787166|ref|XP_003250891.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis mellifera]
Length = 390
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGCG+ I +R+YL A DR WH GCL+C HC VPL +EL+CF+R GNIYCK+D++R
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYRLFAG 97
Query: 79 R 79
R
Sbjct: 98 R 98
>gi|47214973|emb|CAG01307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 396
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCP----EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
D +S +P P E + C GCG+ I+DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DMGESETPLPCLSGERGALCAGCGRKIVDRYYLLAVDKQWHMRCLRCCECKLHLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|380027052|ref|XP_003697250.1| PREDICTED: LIM/homeobox protein Lhx9-like [Apis florea]
Length = 390
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGCG+ I +R+YL A DR WH GCL+C HC VPL +EL+CF+R GNIYCK+D++R
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYRLFAG 97
Query: 79 R 79
R
Sbjct: 98 R 98
>gi|383850874|ref|XP_003700999.1| PREDICTED: LIM/homeobox protein Lhx9-like [Megachile rotundata]
Length = 391
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGCG+ I +R+YL A DR WH GCL+C HC VPL +EL+CF+R GNIYCK+D++R
Sbjct: 38 CGGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 93
>gi|117306370|gb|AAI26705.1| LHX9 protein [Bos taurus]
Length = 388
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|345322211|ref|XP_003430546.1| PREDICTED: LIM/homeobox protein Lhx2-like [Ornithorhynchus
anatinus]
Length = 394
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
Query: 4 DRDDSSSPCP----EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR ++ + P E + C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGETETTMPSISSERAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFRY 75
FS+ G+IYCK+D++RY
Sbjct: 94 FSKDGSIYCKEDYYRY 109
>gi|431921900|gb|ELK19103.1| LIM/homeobox protein Lhx9 [Pteropus alecto]
Length = 479
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD + P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 135 LNGRDAAMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 194
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 195 AKDGSIYCKEDYYR 208
>gi|66792874|ref|NP_001019715.1| LIM/homeobox protein Lhx9 [Bos taurus]
gi|61555226|gb|AAX46681.1| LIM homeobox 9 [Bos taurus]
gi|296478851|tpg|DAA20966.1| TPA: LIM/homeobox protein Lhx9 [Bos taurus]
Length = 378
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDAGMPPLSPEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|508712|gb|AAB08752.1| LIM-homeobox domain protein [Homo sapiens]
Length = 423
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S CGGCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 33 DRGDTETTMPSISSDRAALCGGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 92
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 93 FSKDGSIYCKEDYYR 107
>gi|335296201|ref|XP_003357709.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sus scrofa]
Length = 388
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|224471838|sp|A0JNI8.2|LHX9_BOVIN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|110665672|gb|ABG81482.1| LIM homeobox 9 [Bos taurus]
Length = 397
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|410986202|ref|XP_003999401.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Felis catus]
Length = 388
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|440904877|gb|ELR55334.1| LIM/homeobox protein Lhx9 [Bos grunniens mutus]
Length = 397
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|403307414|ref|XP_003944190.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 388
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|296230329|ref|XP_002760660.1| PREDICTED: LIM/homeobox protein Lhx9 [Callithrix jacchus]
Length = 388
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|62241033|ref|NP_001014434.1| LIM/homeobox protein Lhx9 isoform 2 [Homo sapiens]
gi|114571650|ref|XP_525011.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 6 [Pan troglodytes]
gi|297281170|ref|XP_001110674.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Macaca mulatta]
gi|395729258|ref|XP_002809704.2| PREDICTED: LIM/homeobox protein Lhx9 [Pongo abelii]
gi|397505118|ref|XP_003823120.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan paniscus]
gi|402857736|ref|XP_003893401.1| PREDICTED: LIM/homeobox protein Lhx9 [Papio anubis]
gi|426333155|ref|XP_004028150.1| PREDICTED: LIM/homeobox protein Lhx9 [Gorilla gorilla gorilla]
gi|9367761|emb|CAB97493.1| LIM-homeobox 9 [Homo sapiens]
gi|119611697|gb|EAW91291.1| LIM homeobox 9, isoform CRA_e [Homo sapiens]
Length = 388
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|344276912|ref|XP_003410249.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Loxodonta africana]
Length = 388
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|149743835|ref|XP_001492921.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Equus caballus]
Length = 388
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|348578262|ref|XP_003474902.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cavia
porcellus]
Length = 388
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|291402696|ref|XP_002717724.1| PREDICTED: LIM homeobox protein 9-like isoform 2 [Oryctolagus
cuniculus]
Length = 388
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|311213854|ref|NP_001185656.1| LIM homeobox 9 [Taeniopygia guttata]
Length = 378
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ RD + P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 MNGRDTNMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|410986204|ref|XP_003999402.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Felis catus]
Length = 380
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|345803062|ref|XP_857156.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 4 [Canis lupus
familiaris]
Length = 380
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|344276910|ref|XP_003410248.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Loxodonta africana]
Length = 380
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|29570244|gb|AAO85392.1| LIM-homeobox protein 9 [Sus scrofa]
Length = 369
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|225708026|gb|ACO09859.1| LIM/homeobox protein Lhx9 [Osmerus mordax]
Length = 317
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 53/70 (75%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD++WHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 62 SMSPEKPALCAGCGGKISDRYYLLAVDKRWHLRCLKCCECKLALESELTCFAKDGSIYCK 121
Query: 70 QDFFRYSQAR 79
+D++R+S R
Sbjct: 122 EDYYRFSVQR 131
>gi|31077136|ref|NP_852032.1| LIM/homeobox protein Lhx9 [Rattus norvegicus]
gi|81895227|sp|Q80W90.1|LHX9_RAT RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|30525882|gb|AAP32472.1| LIM-homeodomain type transcription factor Lhx9 [Rattus norvegicus]
Length = 388
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|4530371|gb|AAD22008.1| LIM homeobox protein 9 [Mus musculus]
Length = 378
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDTGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|335296199|ref|XP_003130643.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sus scrofa]
Length = 399
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|119611694|gb|EAW91288.1| LIM homeobox 9, isoform CRA_b [Homo sapiens]
Length = 378
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|444717046|gb|ELW57882.1| LIM/homeobox protein Lhx9 [Tupaia chinensis]
Length = 378
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|33569216|ref|NP_064589.2| LIM/homeobox protein Lhx9 isoform 1 [Homo sapiens]
gi|73960328|ref|XP_848787.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Canis lupus
familiaris]
gi|332230752|ref|XP_003264559.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Nomascus
leucogenys]
gi|224471883|sp|Q9NQ69.3|LHX9_HUMAN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|33416232|gb|AAP32471.2| LIM-homeobox 9 protein [Homo sapiens]
gi|119611696|gb|EAW91290.1| LIM homeobox 9, isoform CRA_d [Homo sapiens]
gi|124297089|gb|AAI31623.1| LIM homeobox 9 [Homo sapiens]
gi|355558916|gb|EHH15696.1| hypothetical protein EGK_01820 [Macaca mulatta]
gi|355746065|gb|EHH50690.1| hypothetical protein EGM_01558 [Macaca fascicularis]
Length = 397
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|395838925|ref|XP_003792355.1| PREDICTED: LIM/homeobox protein Lhx9 [Otolemur garnettii]
Length = 397
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|351708127|gb|EHB11046.1| LIM/homeobox protein Lhx9 [Heterocephalus glaber]
Length = 397
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|348535176|ref|XP_003455077.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oreochromis niloticus]
Length = 417
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Query: 7 DSSSPC--PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHG 64
++S PC E + C GCG+ I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G
Sbjct: 60 ETSMPCMTNERVALCAGCGRKIADRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDG 119
Query: 65 NIYCKQDFFR 74
+IYCK+D++R
Sbjct: 120 SIYCKEDYYR 129
>gi|6180221|emb|CAB59908.1| putative LIM homeodomain protein [Mus musculus]
Length = 366
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 22 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 81
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 82 AKDGSIYCKEDYYR 95
>gi|403307412|ref|XP_003944189.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 399
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|348578260|ref|XP_003474901.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cavia
porcellus]
Length = 397
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|301767830|ref|XP_002919335.1| PREDICTED: LIM/homeobox protein Lhx9-like [Ailuropoda melanoleuca]
Length = 447
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|397505116|ref|XP_003823119.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Pan paniscus]
gi|441624364|ref|XP_004088986.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Nomascus
leucogenys]
Length = 399
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|114571656|ref|XP_001139158.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan troglodytes]
Length = 399
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|281354175|gb|EFB29759.1| hypothetical protein PANDA_007956 [Ailuropoda melanoleuca]
Length = 382
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|291402694|ref|XP_002717723.1| PREDICTED: LIM homeobox protein 9-like isoform 1 [Oryctolagus
cuniculus]
Length = 397
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|242023957|ref|XP_002432397.1| lim homeobox protein, putative [Pediculus humanus corporis]
gi|212517820|gb|EEB19659.1| lim homeobox protein, putative [Pediculus humanus corporis]
Length = 340
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 44/56 (78%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG+ I DRFYL AVDR+WH CLQC C + L E++CF+RHGNIYCK+D++R
Sbjct: 285 CAGCGRKISDRFYLSAVDRKWHATCLQCCQCRIALDGEITCFTRHGNIYCKKDYYR 340
>gi|110611159|ref|NP_001036042.1| LIM/homeobox protein Lhx9 isoform c [Mus musculus]
gi|224471884|sp|Q9WUH2.3|LHX9_MOUSE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|354485102|ref|XP_003504723.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cricetulus
griseus]
Length = 397
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|27923333|gb|AAO27570.1| LIM-homeodomain type transcription factor Lhx9 [Rattus
norvegicus]
Length = 325
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 22 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 81
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 82 AKDGSIYCKEDYYR 95
>gi|126306413|ref|XP_001367734.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Monodelphis
domestica]
gi|395531043|ref|XP_003767592.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sarcophilus
harrisii]
Length = 388
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ S P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 MNGREASMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|119611698|gb|EAW91292.1| LIM homeobox 9, isoform CRA_f [Homo sapiens]
Length = 321
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|224493113|sp|A2I8Z7.1|LHX9_ASTFA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|121531644|gb|ABM55505.1| LIM/homeobox protein 9 [Astyanax mexicanus]
Length = 377
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 43 SVSPEKPALCAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 102
Query: 70 QDFFR 74
+D++R
Sbjct: 103 EDYYR 107
>gi|291402698|ref|XP_002717725.1| PREDICTED: LIM homeobox protein 9-like isoform 3 [Oryctolagus
cuniculus]
Length = 321
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|348578264|ref|XP_003474903.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Cavia
porcellus]
Length = 321
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|354485100|ref|XP_003504722.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cricetulus
griseus]
gi|118763751|gb|AAI28723.1| Lhx9 protein [Rattus norvegicus]
Length = 321
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|6754542|ref|NP_034844.1| LIM/homeobox protein Lhx9 isoform b [Mus musculus]
gi|6179608|emb|CAB59907.1| putative LIM-homeodomain alpha isoform [Mus musculus]
gi|148707590|gb|EDL39537.1| LIM homeobox protein 9, isoform CRA_b [Mus musculus]
Length = 321
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|432854592|ref|XP_004067977.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Oryzias latipes]
Length = 380
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDS-SSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD + S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDSTLPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|4809142|gb|AAD30110.1|AF134761_1 LIM-homeodomain type transcription factor Lhx9 [Mus musculus]
Length = 300
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|345487079|ref|XP_001599685.2| PREDICTED: LIM/homeobox protein Lhx9-like [Nasonia vitripennis]
Length = 406
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 9 SSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYC 68
S P +CGGCG+ I +R+YL A DR WH GCL+C HC +PL +EL+CF+R GNIYC
Sbjct: 36 SQPSSGPSLACGGCGREIAERWYLRAADRPWHCGCLRCCHCRLPLAAELTCFARDGNIYC 95
Query: 69 KQDFFR 74
K+D++R
Sbjct: 96 KEDYYR 101
>gi|126306417|ref|XP_001367814.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Monodelphis
domestica]
Length = 380
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ S P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 MNGREASMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|395531047|ref|XP_003767594.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Sarcophilus
harrisii]
Length = 380
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ S P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 MNGREASMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|432854590|ref|XP_004067976.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Oryzias latipes]
Length = 378
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDS-SSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD + S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDSTLPSMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|260794981|ref|XP_002592485.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277705|gb|EEN48496.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 452
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 13 PEEKSS-CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
PEEK C GCG I+DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCKQD
Sbjct: 53 PEEKPGVCAGCGGRIVDRYYLLAVDKQWHLHCLKCCECKLRLESELTCFAKDGSIYCKQD 112
Query: 72 FFR 74
++R
Sbjct: 113 YYR 115
>gi|6180222|emb|CAB59909.1| putative LIM homeodomain protein [Mus musculus]
Length = 299
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 22 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 81
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 82 AKDGSIYCKEDYYR 95
>gi|432876050|ref|XP_004072952.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oryzias latipes]
Length = 380
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCP----EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
D +S +P P E + C GCG+ I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 55 DMGESETPMPCMTSERVALCAGCGRKIADRYYLLAVDKQWHMRCLKCCECKLNLESELTC 114
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 115 FSKDGSIYCKEDYYR 129
>gi|344254817|gb|EGW10921.1| LIM/homeobox protein Lhx9 [Cricetulus griseus]
Length = 311
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|148707589|gb|EDL39536.1| LIM homeobox protein 9, isoform CRA_a [Mus musculus]
Length = 342
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|70909340|ref|NP_001020736.1| LIM/homeobox protein Lhx9 isoform a [Mus musculus]
gi|49119043|gb|AAH72623.1| LIM homeobox protein 9 [Mus musculus]
Length = 330
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
L RD P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 LNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|405961382|gb|EKC27193.1| LIM/homeobox protein Lhx9 [Crassostrea gigas]
Length = 415
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
E S C GCG I DR+YL+AVD+QWH+ CL+C C + L SEL+CF+R GNIYCK+D++
Sbjct: 57 ESPSFCAGCGSRIFDRYYLMAVDKQWHVNCLKCCECKIGLDSELTCFARDGNIYCKEDYY 116
Query: 74 R 74
R
Sbjct: 117 R 117
>gi|215276334|gb|ACJ65031.1| LHX9 [Xenopus laevis]
Length = 399
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 67 PEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDY 126
Query: 73 FR 74
+R
Sbjct: 127 YR 128
>gi|123907024|sp|Q1LWV4.1|LHX9_DANRE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|94732381|emb|CAK04966.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
gi|190339118|gb|AAI63023.1| Lhx9 protein [Danio rerio]
gi|190339147|gb|AAI63060.1| Lhx9 protein [Danio rerio]
gi|190339149|gb|AAI63073.1| Lhx9 protein [Danio rerio]
Length = 396
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 62 SMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 121
Query: 70 QDFFR 74
+D++R
Sbjct: 122 EDYYR 126
>gi|224493106|sp|A2PZF9.1|LHX9_RANRU RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|124377598|dbj|BAF46216.1| LIM homeobox gene 9 alpha protein [Glandirana rugosa]
Length = 379
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 47 PEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
Query: 73 FR 74
+R
Sbjct: 107 YR 108
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 64 SMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 123
Query: 70 QDFFR 74
+D++R
Sbjct: 124 EDYYR 128
>gi|332229975|ref|XP_003264161.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Nomascus
leucogenys]
Length = 406
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR DS + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDSETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|126306415|ref|XP_001367775.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Monodelphis
domestica]
gi|395531045|ref|XP_003767593.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sarcophilus
harrisii]
Length = 321
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ S P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 44 MNGREASMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 103
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 104 AKDGSIYCKEDYYR 117
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 171 SMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 230
Query: 70 QDFFR 74
+D++R
Sbjct: 231 EDYYR 235
>gi|9409734|emb|CAB98128.1| LIM-homeobox 9 [Homo sapiens]
Length = 257
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 7 PEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 66
Query: 73 FR 74
+R
Sbjct: 67 YR 68
>gi|449268141|gb|EMC79011.1| LIM/homeobox protein Lhx9 [Columba livia]
Length = 378
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ + P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 MNGRETNMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|45382197|ref|NP_990757.1| LIM/homeobox protein Lhx9 [Gallus gallus]
gi|556038|gb|AAA50258.1| homeobox protein [Gallus gallus]
Length = 378
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ + P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 34 MNGRETNMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 93
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 94 AKDGSIYCKEDYYR 107
>gi|224493175|sp|Q90881.2|LHX9_CHICK RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSP-CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ + P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 53 MNGRETNMPPMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 112
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 113 AKDGSIYCKEDYYR 126
>gi|301605176|ref|XP_002932201.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 63 SLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 122
Query: 70 QDFFR 74
+D++R
Sbjct: 123 EDYYR 127
>gi|326924940|ref|XP_003208680.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Meleagris
gallopavo]
Length = 338
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 6 PEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 65
Query: 73 FR 74
+R
Sbjct: 66 YR 67
>gi|355567447|gb|EHH23788.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|307166312|gb|EFN60494.1| LIM/homeobox protein Lhx9 [Camponotus floridanus]
Length = 487
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 20 GGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
GGCG+ I +R+YL A DR WH GCL+C HC VPL +EL+CF+R GNIYCK+D++R
Sbjct: 138 GGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 192
>gi|124377606|dbj|BAF46220.1| LIM homeobox gene 9 epsilon protein [Glandirana rugosa]
Length = 297
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 47 PEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
Query: 73 FR 74
+R
Sbjct: 107 YR 108
>gi|432095435|gb|ELK26634.1| LIM/homeobox protein Lhx2 [Myotis davidii]
Length = 389
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 17 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 76
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 77 FSKDGSIYCKEDYYR 91
>gi|344243883|gb|EGV99986.1| LIM/homeobox protein Lhx2 [Cricetulus griseus]
Length = 385
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 17 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 76
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 77 FSKDGSIYCKEDYYR 91
>gi|124377600|dbj|BAF46217.1| LIM homeobox gene 9 beta protein [Glandirana rugosa]
Length = 347
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 47 PEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
Query: 73 FR 74
+R
Sbjct: 107 YR 108
>gi|345306379|ref|XP_001506055.2| PREDICTED: LIM/homeobox protein Lhx9-like [Ornithorhynchus
anatinus]
Length = 303
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 2 LKDRDDSSSPC-PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+ R+ S P PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF
Sbjct: 58 MNGREASLPPSSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 117
Query: 61 SRHGNIYCKQDFFR 74
++ G+IYCK+D++R
Sbjct: 118 AKDGSIYCKEDYYR 131
>gi|6754538|ref|NP_034840.1| LIM/homeobox protein Lhx2 [Mus musculus]
gi|157817308|ref|NP_001100041.1| LIM/homeobox protein Lhx2 [Rattus norvegicus]
gi|8134552|sp|Q9Z0S2.1|LHX2_MOUSE RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|4406516|gb|AAD20012.1| LIM-homeodomain protein MLHX2 [Mus musculus]
gi|26343551|dbj|BAC35432.1| unnamed protein product [Mus musculus]
gi|33416474|gb|AAH55741.1| LIM homeobox protein 2 [Mus musculus]
gi|149047902|gb|EDM00518.1| LIM homeobox protein 2 (predicted) [Rattus norvegicus]
Length = 406
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|124377602|dbj|BAF46218.1| LIM homeobox gene 9 gamma protein [Glandirana rugosa]
Length = 331
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 47 PEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
Query: 73 FR 74
+R
Sbjct: 107 YR 108
>gi|4406518|gb|AAD20013.1| LIM-homeodomain protein HLHX2 [Homo sapiens]
Length = 389
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 17 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 76
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 77 FSKDGSIYCKEDYYR 91
>gi|348570108|ref|XP_003470839.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Cavia porcellus]
Length = 406
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|124377604|dbj|BAF46219.1| LIM homeobox gene 9 delta protein [Glandirana rugosa]
Length = 312
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 47 PEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
Query: 73 FR 74
+R
Sbjct: 107 YR 108
>gi|34733871|gb|AAQ81868.1| LIM homeobox gene protein 2 [Ambystoma mexicanum]
Length = 398
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCP----EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P + + C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTQTTMPSISNDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|281427312|ref|NP_001163990.1| LIM/homeobox protein Lhx2 [Sus scrofa]
gi|300794175|ref|NP_001178104.1| LIM/homeobox protein Lhx2 [Bos taurus]
gi|239937382|dbj|BAH79127.1| LIM homeobox protein 2 [Sus scrofa]
gi|296482193|tpg|DAA24308.1| TPA: LIM homeobox protein 2-like [Bos taurus]
Length = 406
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|387763115|ref|NP_001248721.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
gi|402896424|ref|XP_003911300.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Papio anubis]
gi|380818036|gb|AFE80892.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|426223060|ref|XP_004005697.1| PREDICTED: LIM/homeobox protein Lhx2 [Ovis aries]
Length = 404
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|301769255|ref|XP_002920044.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 1 [Ailuropoda
melanoleuca]
gi|345806102|ref|XP_863668.2| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Canis lupus
familiaris]
gi|281350174|gb|EFB25758.1| hypothetical protein PANDA_008723 [Ailuropoda melanoleuca]
Length = 406
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|30795196|ref|NP_004780.3| LIM/homeobox protein Lhx2 [Homo sapiens]
gi|297685314|ref|XP_002820237.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pongo abelii]
gi|397473226|ref|XP_003808118.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pan paniscus]
gi|426362988|ref|XP_004048630.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Gorilla gorilla
gorilla]
gi|8247936|sp|P50458.2|LHX2_HUMAN RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|62739692|gb|AAH93662.1| LIM homeobox 2 [Homo sapiens]
gi|85567249|gb|AAI12186.1| LIM homeobox protein 2 [Homo sapiens]
gi|119607982|gb|EAW87576.1| LIM homeobox 2, isoform CRA_a [Homo sapiens]
gi|167773563|gb|ABZ92216.1| LIM homeobox 2 [synthetic construct]
gi|261859194|dbj|BAI46119.1| LIM homeobox 2 [synthetic construct]
Length = 406
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|403299862|ref|XP_003940693.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|307196006|gb|EFN77731.1| LIM/homeobox protein Lhx9 [Harpegnathos saltator]
Length = 433
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGCG+ I +R+YL A DR WH GCL+C HC VPL +EL+CF+R GNIYCK+D+ R
Sbjct: 58 CGGCGREIAERWYLKAADRVWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYCR 113
>gi|547852|sp|P36198.1|LHX2_RAT RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
Length = 426
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 33 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 92
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 93 FSKDGSIYCKEDYYR 107
>gi|395824161|ref|XP_003785339.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Otolemur garnettii]
Length = 406
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|291408369|ref|XP_002720520.1| PREDICTED: LIM homeobox protein 2-like [Oryctolagus cuniculus]
Length = 406
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|348536383|ref|XP_003455676.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Oreochromis
niloticus]
Length = 333
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 64 SMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 123
Query: 70 QDFFR 74
+D++R
Sbjct: 124 EDYYR 128
>gi|301605174|ref|XP_002932200.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 331
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 63 SLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 122
Query: 70 QDFFR 74
+D++R
Sbjct: 123 EDYYR 127
>gi|432092293|gb|ELK24915.1| LIM/homeobox protein Lhx9, partial [Myotis davidii]
Length = 420
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 6 PEKPALCAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 65
Query: 73 FR 74
+R
Sbjct: 66 YR 67
>gi|444707251|gb|ELW48535.1| LIM/homeobox protein Lhx2 [Tupaia chinensis]
Length = 442
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|47217395|emb|CAG00755.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 3 SMSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 62
Query: 70 QDFFR 74
+D++R
Sbjct: 63 EDYYR 67
>gi|62955397|ref|NP_001017710.1| LIM/homeobox protein Lhx9 isoform 1 [Danio rerio]
gi|62205415|gb|AAH93258.1| LIM homeobox 9 [Danio rerio]
Length = 330
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 62 SMSPERPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 121
Query: 70 QDFFR 74
+D++R
Sbjct: 122 EDYYR 126
>gi|326924942|ref|XP_003208681.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Meleagris
gallopavo]
Length = 271
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
PE+ + C GCG I DR+YLLAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D+
Sbjct: 6 PEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 65
Query: 73 FR 74
+R
Sbjct: 66 YR 67
>gi|354498706|ref|XP_003511455.1| PREDICTED: LIM/homeobox protein Lhx2-like [Cricetulus griseus]
Length = 475
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 107 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 166
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 167 FSKDGSIYCKEDYYR 181
>gi|449478340|ref|XP_004175607.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Taeniopygia
guttata]
Length = 399
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR ++ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGETETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|123299964|dbj|BAF45328.1| LIM homeobox protein 2 [Sus scrofa]
Length = 373
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|449268595|gb|EMC79451.1| LIM/homeobox protein Lhx2 [Columba livia]
Length = 416
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR ++ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGETETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|395505659|ref|XP_003757157.1| PREDICTED: LIM/homeobox protein Lhx2 [Sarcophilus harrisii]
Length = 408
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR ++ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGETETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 94 FSKDGSIYCKEDYYR 108
>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR ++ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 55 DRGETETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 114
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 115 FSKDGSIYCKEDYYR 129
>gi|332229977|ref|XP_003264162.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Nomascus
leucogenys]
Length = 414
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR DS + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDSETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 94 FSKDGSIYCKEDYY 107
>gi|307166315|gb|EFN60497.1| Protein apterous [Camponotus floridanus]
Length = 506
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVDR+WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 183 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEITCFSRDGNIYCKKDYYR 238
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S PE+ + C GCG I DR+YL AVD+QWHL CL+C C + L SEL+CF++ G+IYCK
Sbjct: 62 SMSPEKPALCAGCGGKISDRYYLHAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCK 121
Query: 70 QDFFR 74
+D++R
Sbjct: 122 EDYYR 126
>gi|345806104|ref|XP_548461.3| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Canis lupus
familiaris]
Length = 397
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 17 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 76
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 77 FSKDGSIYCKEDYY 90
>gi|291290877|ref|NP_001167469.1| LIM homeobox 2 [Xenopus laevis]
gi|37720481|gb|AAN41461.1| LIM homeobox protein 2 [Xenopus laevis]
Length = 419
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR ++ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 55 DRGETETIMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 114
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+IYCK+D++R
Sbjct: 115 FSKDGSIYCKEDYYR 129
>gi|345487077|ref|XP_001599660.2| PREDICTED: hypothetical protein LOC100114734 [Nasonia vitripennis]
Length = 644
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVDR+WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 239 CAGCGLRISDRFYLQAVDRRWHASCLQCSHCRQGLDGEVTCFSREGNIYCKKDYYR 294
>gi|397473228|ref|XP_003808119.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pan paniscus]
gi|426362990|ref|XP_004048631.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Gorilla gorilla
gorilla]
gi|21753589|dbj|BAC04371.1| unnamed protein product [Homo sapiens]
gi|119607983|gb|EAW87577.1| LIM homeobox 2, isoform CRA_b [Homo sapiens]
Length = 397
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 17 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 76
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 77 FSKDGSIYCKEDYY 90
>gi|403299864|ref|XP_003940694.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 397
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 17 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 76
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 77 FSKDGSIYCKEDYY 90
>gi|45382441|ref|NP_990220.1| LIM/homeobox protein Lhx2 [Gallus gallus]
gi|2340819|dbj|BAA21846.1| LIM homeodomain [Gallus gallus]
Length = 400
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 54 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 109
>gi|431898812|gb|ELK07182.1| LIM/homeobox protein Lhx2 [Pteropus alecto]
Length = 414
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 94 FSKDGSIYCKEDYY 107
>gi|328787176|ref|XP_392622.4| PREDICTED: protein apterous [Apis mellifera]
Length = 560
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVDR+WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 188 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 243
>gi|440908262|gb|ELR58305.1| LIM/homeobox protein Lhx2, partial [Bos grunniens mutus]
Length = 410
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 31 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 90
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 91 FSKDGSIYCKEDYY 104
>gi|380027050|ref|XP_003697249.1| PREDICTED: protein apterous-like [Apis florea]
Length = 555
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVDR+WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 186 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 241
>gi|395824163|ref|XP_003785340.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Otolemur garnettii]
Length = 414
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 94 FSKDGSIYCKEDYY 107
>gi|402896426|ref|XP_003911301.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Papio anubis]
Length = 414
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 94 FSKDGSIYCKEDYY 107
>gi|297685312|ref|XP_002820236.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pongo abelii]
Length = 414
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFF 73
FS+ G+IYCK+D++
Sbjct: 94 FSKDGSIYCKEDYY 107
>gi|187171273|ref|NP_001035099.3| LIM/homeobox protein Lhx2 [Danio rerio]
Length = 427
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 84 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 139
>gi|224073927|ref|XP_002191376.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Taeniopygia
guttata]
Length = 436
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 90 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 145
>gi|190338019|gb|AAI62549.1| LIM homeobox 2 [Danio rerio]
Length = 396
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|350404757|ref|XP_003487210.1| PREDICTED: protein apterous-like [Bombus impatiens]
Length = 550
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVDR+WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 175 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 230
>gi|383850854|ref|XP_003700989.1| PREDICTED: protein apterous-like [Megachile rotundata]
Length = 620
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVDR+WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 245 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 300
>gi|133778048|gb|AAI27382.2| LIM homeobox 2 [Danio rerio]
gi|182888988|gb|AAI64490.1| Lhx2 protein [Danio rerio]
Length = 396
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|75993708|gb|ABA33890.1| lim homeobox transcription factor 2 [Danio rerio]
Length = 396
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 108
>gi|193786574|dbj|BAG51357.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCPEEKSS----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR D+ + P S C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+C
Sbjct: 34 DRGDTETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G+ YCK+D++R
Sbjct: 94 FSKDGSSYCKEDYYR 108
>gi|351702111|gb|EHB05030.1| LIM/homeobox protein Lhx2 [Heterocephalus glaber]
Length = 502
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 165 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 220
>gi|115727487|ref|XP_782032.2| PREDICTED: LIM/homeobox protein Lhx9 [Strongylocentrotus
purpuratus]
Length = 474
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYLLA DRQWH CLQC C+V L SELSCF++ GNIYCK+D+ +
Sbjct: 54 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYLK 109
>gi|344271943|ref|XP_003407796.1| PREDICTED: LIM/homeobox protein Lhx2 [Loxodonta africana]
Length = 365
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|114626624|ref|XP_528427.2| PREDICTED: LIM/homeobox protein Lhx2 [Pan troglodytes]
Length = 365
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|301769257|ref|XP_002920045.1| PREDICTED: LIM/homeobox protein Lhx2-like isoform 2 [Ailuropoda
melanoleuca]
Length = 404
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|296190791|ref|XP_002743350.1| PREDICTED: LIM/homeobox protein Lhx2 [Callithrix jacchus]
Length = 365
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|348570106|ref|XP_003470838.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Cavia porcellus]
Length = 404
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|170048224|ref|XP_001870661.1| lim homeobox protein [Culex quinquefasciatus]
gi|167870355|gb|EDS33738.1| lim homeobox protein [Culex quinquefasciatus]
Length = 189
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 1 MLKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
MLKD + + PE+ C GCG PI DR+YLL DR WH CL+C C L +ELSC+
Sbjct: 66 MLKDLIAAETVTPEK---CAGCGIPIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCY 122
Query: 61 SRHGNIYCKQDFFRYSQAR 79
+R GNIYCK D++R S +
Sbjct: 123 AREGNIYCKDDYYRASHLK 141
>gi|348570110|ref|XP_003470840.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 3 [Cavia porcellus]
Length = 404
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 107
>gi|332018691|gb|EGI59263.1| Protein apterous [Acromyrmex echinatior]
Length = 558
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVD++WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 184 CAGCGLKISDRFYLQAVDKRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 239
>gi|322778961|gb|EFZ09372.1| hypothetical protein SINV_02768 [Solenopsis invicta]
Length = 246
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVD++WH CLQC+HC L E++CFSR GNIYCK+D++R
Sbjct: 191 CAGCGLKISDRFYLQAVDKRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR 246
>gi|227430299|ref|NP_001153058.1| LIM homeobox 2a [Danio rerio]
gi|226434001|gb|ACO56117.1| LIM homeodomain protein 2a [Danio rerio]
Length = 320
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYLLA +R+WH CL+C+ C L SEL+CFS+HG+IYCK+D++R
Sbjct: 13 CAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCKEDYYR 68
>gi|410979132|ref|XP_003995940.1| PREDICTED: LIM/homeobox protein Lhx2 [Felis catus]
Length = 484
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++R
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR 67
>gi|157119548|ref|XP_001659418.1| lim homeobox protein [Aedes aegypti]
gi|108875286|gb|EAT39511.1| AAEL008685-PA [Aedes aegypti]
Length = 345
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 1 MLKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
MLKD + + PE+ C GCG I DR+YLL DR WH CL+C C L +ELSC+
Sbjct: 1 MLKDLIAAETVTPEK---CAGCGISIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCY 57
Query: 61 SRHGNIYCKQDFFRYSQAR 79
+R GNIYCK D++R+ +R
Sbjct: 58 AREGNIYCKDDYYRHFSSR 76
>gi|307196004|gb|EFN77729.1| Protein apterous [Harpegnathos saltator]
Length = 240
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYL AVDR+WH CLQC+HC L E +CFSR GNIYCK+D++R
Sbjct: 185 CAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGESTCFSRDGNIYCKKDYYR 240
>gi|167859072|gb|ACA04471.1| Lhx2 [Strongylocentrotus purpuratus]
Length = 251
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRFYLLA DRQWH CLQC C+V L SELSCF++ GNIYCK+D+ +
Sbjct: 51 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYLK 106
>gi|259013283|ref|NP_001158443.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
gi|197320559|gb|ACH68441.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
Length = 402
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I+DR+YLLAVD+QWH+ CL+C C + L SEL+CF++ G+IYCK D++R
Sbjct: 59 CAGCGGRILDRYYLLAVDKQWHMQCLKCCECKLRLDSELTCFAKDGSIYCKDDYYR 114
>gi|76667074|dbj|BAE45356.1| LIM homeodomain type transcription factor Lhx2 [Danio rerio]
Length = 395
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 44/56 (78%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CF + G+IYCK++++R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFDKDGSIYCKEEYYR 108
>gi|338720511|ref|XP_001502198.3| PREDICTED: LIM/homeobox protein Lhx2-like [Equus caballus]
Length = 373
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
C GCG I DR+YLLAVD+QWH+ CL+C C + L SEL+CFS+ G+IYCK+D++
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYY 66
>gi|260794979|ref|XP_002592484.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277704|gb|EEN48495.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 330
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+CGGCG+ I DRF+L AVDRQWH CL+C C V L EL+CFS+ G IYC++D++R
Sbjct: 14 ACGGCGEKIQDRFFLHAVDRQWHSACLKCCECDVRLDCELTCFSKDGRIYCREDYYR 70
>gi|319740961|gb|ADV69000.1| lim-homeobox 2/9 [Patiria miniata]
Length = 304
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 11 PCPEEKSS---CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
P P EKS C GCG PI DR+YLLA D+QWH CL+C C V L +EL+CF++ G IY
Sbjct: 37 PPPYEKSKACMCAGCGGPIQDRYYLLAADQQWHTECLRCCECKVTLDNELTCFAKDGGIY 96
Query: 68 CKQDFFR 74
CK+ +FR
Sbjct: 97 CKEHYFR 103
>gi|443696308|gb|ELT97041.1| hypothetical protein CAPTEDRAFT_43751, partial [Capitella teleta]
Length = 271
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG+ I DR+YL AV+R WH CL+CA C +PL SE++C++R G+I+CK+D++R
Sbjct: 2 CAGCGEKITDRYYLQAVERAWHANCLRCAQCKLPLDSEVTCYARDGSIFCKEDYYR 57
>gi|195119850|ref|XP_002004442.1| GI19612 [Drosophila mojavensis]
gi|193909510|gb|EDW08377.1| GI19612 [Drosophila mojavensis]
Length = 485
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 163 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 222
Query: 79 R 79
R
Sbjct: 223 R 223
>gi|195353746|ref|XP_002043364.1| GM16501 [Drosophila sechellia]
gi|194127487|gb|EDW49530.1| GM16501 [Drosophila sechellia]
Length = 535
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 214 CSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 273
Query: 79 R 79
R
Sbjct: 274 R 274
>gi|195027475|ref|XP_001986608.1| GH20430 [Drosophila grimshawi]
gi|193902608|gb|EDW01475.1| GH20430 [Drosophila grimshawi]
Length = 469
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 148 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 207
Query: 79 R 79
R
Sbjct: 208 R 208
>gi|195425678|ref|XP_002061119.1| apterous [Drosophila willistoni]
gi|27374312|gb|AAO01060.1| ap-PA [Drosophila willistoni]
gi|194157204|gb|EDW72105.1| apterous [Drosophila willistoni]
Length = 469
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 149 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 208
Query: 79 R 79
R
Sbjct: 209 R 209
>gi|125810912|ref|XP_001361667.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|195154388|ref|XP_002018104.1| GL16944 [Drosophila persimilis]
gi|27374288|gb|AAO01041.1| ap-PA [Drosophila pseudoobscura]
gi|54636843|gb|EAL26246.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|194113900|gb|EDW35943.1| GL16944 [Drosophila persimilis]
Length = 469
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 148 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 207
Query: 79 R 79
R
Sbjct: 208 R 208
>gi|195402627|ref|XP_002059906.1| apterous [Drosophila virilis]
gi|27374202|gb|AAN87274.1| ap [Drosophila virilis]
gi|194140772|gb|EDW57243.1| apterous [Drosophila virilis]
Length = 472
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 209
Query: 79 R 79
R
Sbjct: 210 R 210
>gi|281360182|ref|NP_001163058.1| apterous, isoform C [Drosophila melanogaster]
gi|17862966|gb|AAL39960.1| SD05618p [Drosophila melanogaster]
gi|272432345|gb|ACZ94338.1| apterous, isoform C [Drosophila melanogaster]
Length = 468
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 147 CSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 206
Query: 79 R 79
R
Sbjct: 207 R 207
>gi|194864184|ref|XP_001970812.1| ap [Drosophila erecta]
gi|190662679|gb|EDV59871.1| ap [Drosophila erecta]
Length = 469
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 148 CSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 207
Query: 79 R 79
R
Sbjct: 208 R 208
>gi|24585889|ref|NP_724428.1| apterous, isoform A [Drosophila melanogaster]
gi|195580840|ref|XP_002080242.1| GD10352 [Drosophila simulans]
gi|231559|sp|P29673.1|APTE_DROME RecName: Full=Protein apterous
gi|7601|emb|CAA46276.1| developmental regulatory protein [Drosophila melanogaster]
gi|157822|gb|AAA28673.1| LIM-homeodomain apterous protein [Drosophila melanogaster]
gi|7302219|gb|AAF57314.1| apterous, isoform A [Drosophila melanogaster]
gi|28912908|gb|AAO61758.1| HL02012p [Drosophila melanogaster]
gi|194192251|gb|EDX05827.1| GD10352 [Drosophila simulans]
gi|220942502|gb|ACL83794.1| ap-PA [synthetic construct]
gi|220952712|gb|ACL88899.1| ap-PA [synthetic construct]
Length = 469
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 148 CSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 207
Query: 79 R 79
R
Sbjct: 208 R 208
>gi|195475694|ref|XP_002090119.1| GE19443 [Drosophila yakuba]
gi|194176220|gb|EDW89831.1| GE19443 [Drosophila yakuba]
Length = 469
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 148 CSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 207
Query: 79 R 79
R
Sbjct: 208 R 208
>gi|194758260|ref|XP_001961380.1| GF13843 [Drosophila ananassae]
gi|190622678|gb|EDV38202.1| GF13843 [Drosophila ananassae]
Length = 469
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++ +
Sbjct: 148 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 207
Query: 79 R 79
R
Sbjct: 208 R 208
>gi|27374323|gb|AAO01069.1| ap-PA [Drosophila virilis]
Length = 204
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
C GCG+ I DRFYL AV+++WH CLQC C PL E SC+SR GNIYCK D++
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 204
>gi|350404759|ref|XP_003487211.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus impatiens]
Length = 441
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 24 QPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ I +R+YL A DR WH GCL+C HC VPL +EL+CF+R GNIYCK+D++R
Sbjct: 93 REIAERWYLKAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 143
>gi|328708276|ref|XP_001946004.2| PREDICTED: protein apterous-like [Acyrthosiphon pisum]
Length = 556
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E + C GCG I+DR+YL AVD++WH CLQC+ C L SE+ CF R GNIYCK D+ R
Sbjct: 181 EVNLCDGCGLKILDRYYLFAVDKRWHASCLQCSQCTRTLASEIKCFYRDGNIYCKADYQR 240
>gi|340721020|ref|XP_003398925.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus terrestris]
Length = 391
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 40/49 (81%)
Query: 26 IIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
I +R+YL A DR WH GCL+C HC VPL +EL+CF+R GNIYCK+D++R
Sbjct: 45 IAERWYLKAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYR 93
>gi|156390719|ref|XP_001635417.1| predicted protein [Nematostella vectensis]
gi|156222511|gb|EDO43354.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
++++ C GCG I++RFYL+AVD++WH CL+C+ C + L +EL+CFS+ G I C++D++
Sbjct: 4 KQQAVCAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYY 63
Query: 74 R 74
R
Sbjct: 64 R 64
>gi|321454678|gb|EFX65839.1| hypothetical protein DAPPUDRAFT_65174 [Daphnia pulex]
Length = 291
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P + CGGCG I DR+YL+AV+R WH CL+C C PL + LSCFSR IYC+ D+
Sbjct: 12 PSPTTLCGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDY 71
Query: 73 FRYSQAR 79
+R R
Sbjct: 72 YRLFGVR 78
>gi|299115102|dbj|BAJ09782.1| apterous 1 [Daphnia magna]
Length = 468
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P + CGGCG I DR+YL+AV+R WH CL+C C PL + LSCFSR IYC+ D+
Sbjct: 1 PSPTTLCGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDY 60
Query: 73 FRYSQAR 79
+R R
Sbjct: 61 YRLFGVR 67
>gi|357622660|gb|EHJ74086.1| apterous a [Danaus plexippus]
Length = 397
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DR+YLLA++R+WH CL+C C +PL SE C++R NI+CK D+FR
Sbjct: 63 CAGCGARITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYFR 118
>gi|443696309|gb|ELT97042.1| hypothetical protein CAPTEDRAFT_167444 [Capitella teleta]
Length = 444
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 43/56 (76%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG+ I DR+YL V++ WH+ CL C CH PL ++++C+++ GNIYCK+D++R
Sbjct: 99 CAGCGETITDRYYLTTVEQCWHVHCLMCVDCHRPLDTQMTCYAKDGNIYCKEDYYR 154
>gi|157119552|ref|XP_001659420.1| hypothetical protein AaeL_AAEL008690 [Aedes aegypti]
gi|108875288|gb|EAT39513.1| AAEL008690-PA, partial [Aedes aegypti]
Length = 176
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 39/62 (62%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P C GC PI DRFYL AV+R+WH CLQC C L SCFSR GNIYCK D+
Sbjct: 115 PSGLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDY 174
Query: 73 FR 74
+R
Sbjct: 175 YR 176
>gi|391341454|ref|XP_003745045.1| PREDICTED: LIM/homeobox protein Lhx9-like [Metaseiulus
occidentalis]
Length = 343
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 38/61 (62%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG PI DR++L + WH+GCLQCAHC L SCF R G IYCK D+FR
Sbjct: 25 CTGCGNPICDRYFLCVGEMYWHVGCLQCAHCKTTLEQHASCFLRSGRIYCKNDYFRLFSL 84
Query: 79 R 79
R
Sbjct: 85 R 85
>gi|158299663|ref|XP_319730.4| AGAP008981-PA [Anopheles gambiae str. PEST]
gi|157013625|gb|EAA14878.5| AGAP008981-PA [Anopheles gambiae str. PEST]
Length = 197
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 38/56 (67%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC PI DRFYL AV+R+WH CLQC C L SCFSR GNIYCK D++R
Sbjct: 142 CAGCDMPIQDRFYLSAVERKWHASCLQCCICRQTLEGANSCFSRDGNIYCKTDYYR 197
>gi|170048230|ref|XP_001870664.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870358|gb|EDS33741.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 209
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 38/56 (67%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC PI DRFYL AV+R+WH CLQC C L SCFSR GNIYCK D++R
Sbjct: 154 CAGCDMPIQDRFYLSAVERKWHATCLQCCVCRQTLEGANSCFSRDGNIYCKTDYYR 209
>gi|281347117|gb|EFB22701.1| hypothetical protein PANDA_014076 [Ailuropoda melanoleuca]
Length = 369
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
S++P P E C GC Q I+DRF L A+DR WH CL+C CH PL CFSR ++Y
Sbjct: 23 SAAPWPAEIPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAER--CFSRGESVY 80
Query: 68 CKQDFFR 74
CK DFF+
Sbjct: 81 CKDDFFK 87
>gi|157106396|ref|XP_001649304.1| hypothetical protein AaeL_AAEL014669 [Aedes aegypti]
gi|108868848|gb|EAT33073.1| AAEL014669-PA [Aedes aegypti]
Length = 233
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 38/61 (62%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P C GC PI DRFYL AV+R+WH CLQC C L SCFSR GNIYCK D+
Sbjct: 133 PSGLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDY 192
Query: 73 F 73
+
Sbjct: 193 Y 193
>gi|328925118|dbj|BAK19074.1| Bmptp-Z and Bmap-A fusion protein alpha [Bombyx mori]
Length = 466
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P C GCG I DR+YLLA++R+WH CL+C C +PL SE C++R NI+CK D+
Sbjct: 126 PPADDPCAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 185
Query: 73 FR 74
R
Sbjct: 186 IR 187
>gi|301615074|ref|XP_002937009.1| PREDICTED: LIM/homeobox protein Lhx4-like [Xenopus (Silurana)
tropicalis]
Length = 385
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 1 MLKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCF 60
+L +R P+E C GC + I+D+F L +DR WH CL+C C VPL CF
Sbjct: 21 LLYERSSRQGAMPKEIPRCSGCNEHILDKFILKVLDRHWHSACLKCCECQVPLAER--CF 78
Query: 61 SRHGNIYCKQDFFR 74
R GN+YCK+DFF+
Sbjct: 79 YRAGNVYCKEDFFK 92
>gi|328925128|dbj|BAK19079.1| apterous A splicing isoform type B [Bombyx mori]
Length = 398
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P C GCG I DR+YLLA++R+WH CL+C C +PL SE C++R NI+CK D+
Sbjct: 58 PPADDPCAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 117
Query: 73 FR 74
R
Sbjct: 118 IR 119
>gi|328925120|dbj|BAK19075.1| Bmptp-Z and Bmap-A fusion protein beta [Bombyx mori]
Length = 444
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P C GCG I DR+YLLA++R+WH CL+C C +PL SE C++R NI+CK D+
Sbjct: 126 PPADDPCAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 185
Query: 73 FR 74
R
Sbjct: 186 IR 187
>gi|328925130|dbj|BAK19080.1| apterous A splicing isoform type C [Bombyx mori]
Length = 385
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P C GCG I DR+YLLA++R+WH CL+C C +PL SE C++R NI+CK D+
Sbjct: 58 PPADDPCAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 117
Query: 73 FR 74
R
Sbjct: 118 IR 119
>gi|328925116|dbj|BAK19073.1| apterous A splicing isoform type A [Bombyx mori]
Length = 376
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P C GCG I DR+YLLA++R+WH CL+C C +PL SE C++R NI+CK D+
Sbjct: 58 PPADDPCAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 117
Query: 73 FR 74
R
Sbjct: 118 IR 119
>gi|224994808|ref|NP_001139341.1| apterous a [Tribolium castaneum]
gi|224459212|gb|ACN43341.1| apterous a [Tribolium castaneum]
Length = 465
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 26 IIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
I DRFYL AVDR+WH CLQC C L E++CFSR GNIYCK+D++R
Sbjct: 137 ITDRFYLQAVDRRWHASCLQCCQCRNTLDGEITCFSRDGNIYCKKDYYR 185
>gi|355564712|gb|EHH21212.1| hypothetical protein EGK_04224, partial [Macaca mulatta]
Length = 293
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
Length = 456
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L DR WH CLQC+ CHV L+ + CF+R+G ++CK DFF+
Sbjct: 66 CGGCHELILDRFILKVSDRTWHAKCLQCSECHVQLNEK--CFARNGQLFCKDDFFKRYGT 123
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T V
Sbjct: 124 KCAACDLGIPPTQV 137
>gi|449509307|ref|XP_002191188.2| PREDICTED: LIM/homeobox protein Lhx4-like, partial [Taeniopygia
guttata]
Length = 412
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 9 SSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYC 68
SSP E C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YC
Sbjct: 37 SSPLGAEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFSRAGSVYC 94
Query: 69 KQDFFR 74
K+DFF+
Sbjct: 95 KEDFFK 100
>gi|321454677|gb|EFX65838.1| hypothetical protein DAPPUDRAFT_13685 [Daphnia pulex]
Length = 266
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG I+DR+YL+AVD+ WH CL+C C PL + LSCF+R IYC++D+ R
Sbjct: 2 CAGCGFKIVDRYYLVAVDKAWHSECLRCDECRRPLDTALSCFARQSRIYCREDYNRLFGG 61
Query: 79 R 79
R
Sbjct: 62 R 62
>gi|780314|gb|AAA73902.1| PLim [Mus musculus]
Length = 400
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRRESVYCKDDFFK 87
>gi|332250744|ref|XP_003274511.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Nomascus leucogenys]
Length = 323
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR---- 58
Query: 79 RYPDLPIPKTLVS--FLYDK 96
PD P L ++DK
Sbjct: 59 --PDAPNIAVLAKRLMIFDK 76
>gi|293345787|ref|XP_001078243.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus
norvegicus]
gi|293357700|ref|XP_001059910.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus
norvegicus]
gi|149039302|gb|EDL93522.1| rCG45383, isoform CRA_b [Rattus norvegicus]
Length = 402
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 89
>gi|355786560|gb|EHH66743.1| hypothetical protein EGM_03791, partial [Macaca fascicularis]
Length = 306
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYS 76
C GCG+PI+DRF L +DR WH CLQC CH L + CFS+ ++CK DFFR+S
Sbjct: 47 CAGCGEPILDRFILKVLDRSWHSRCLQCHDCHARLSDK--CFSKGEKVFCKDDFFRWS 102
>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
Length = 391
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA CH L + CFSR GN+YCK+DFF+
Sbjct: 33 CAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADK--CFSRAGNVYCKEDFFK 86
>gi|89001116|ref|NP_001034742.1| LIM/homeobox protein Lhx3 [Mus musculus]
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus]
gi|124375774|gb|AAI32557.1| LIM homeobox protein 3 [Mus musculus]
gi|124376794|gb|AAI32555.1| LIM homeobox protein 3 [Mus musculus]
Length = 402
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 89
>gi|148676345|gb|EDL08292.1| mCG18748, isoform CRA_b [Mus musculus]
Length = 402
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 89
>gi|293345789|ref|XP_002726117.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus
norvegicus]
gi|293357702|ref|XP_002729190.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus
norvegicus]
gi|149039301|gb|EDL93521.1| rCG45383, isoform CRA_a [Rattus norvegicus]
Length = 400
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 87
>gi|120537751|gb|AAI29375.1| Lhx4 protein [Danio rerio]
Length = 244
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA CH L + CFSR GN+YCK+DFF+
Sbjct: 31 CAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADK--CFSRAGNVYCKEDFFK 84
>gi|344308350|ref|XP_003422840.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Loxodonta
africana]
Length = 401
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YC++DFFR
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCREDFFR 87
>gi|332833327|ref|XP_003312450.1| PREDICTED: LIM/homeobox protein Lhx3 [Pan troglodytes]
Length = 396
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
+P PE C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK
Sbjct: 22 APAPE-IPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCK 78
Query: 70 QDFFR 74
DFFR
Sbjct: 79 DDFFR 83
>gi|1708829|sp|P50481.1|LHX3_MOUSE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
AltName: Full=Homeobox protein P-LIM
gi|575517|gb|AAA62369.1| LIM-homeoprotein [Mus musculus]
gi|187956241|gb|AAI50690.1| Lhx3 protein [Mus musculus]
Length = 400
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 87
>gi|351701911|gb|EHB04830.1| LIM/homeobox protein Lhx3 [Heterocephalus glaber]
Length = 448
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 11 PCPEEKSS-CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
P P+E+ C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK
Sbjct: 73 PLPQEEIPLCAGCDQHILDRFVLKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCK 130
Query: 70 QDFFR 74
DFF+
Sbjct: 131 DDFFK 135
>gi|148676344|gb|EDL08291.1| mCG18748, isoform CRA_a [Mus musculus]
Length = 400
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 87
>gi|114627512|ref|XP_001171089.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan troglodytes]
Length = 402
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFFR
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFR 89
>gi|348551170|ref|XP_003461403.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Cavia porcellus]
Length = 404
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|344308352|ref|XP_003422841.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Loxodonta
africana]
Length = 403
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YC++DFFR
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCREDFFR 89
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|114627514|ref|XP_001171072.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan troglodytes]
Length = 397
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFFR
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFR 84
>gi|354497582|ref|XP_003510898.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Cricetulus
griseus]
gi|344256661|gb|EGW12765.1| LIM/homeobox protein Lhx3 [Cricetulus griseus]
Length = 403
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH+PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAER--CFSRGESVYCKDDFFK 89
>gi|410976694|ref|XP_003994749.1| PREDICTED: LIM/homeobox protein Lhx5 [Felis catus]
Length = 332
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
Length = 523
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF+ S
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFK-SNR 178
Query: 79 RYP------DLPIPKTLV 90
RY D+ IP T V
Sbjct: 179 RYGTKCSACDMGIPPTQV 196
>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
Length = 389
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C PL + CFSR G++YCK+DFF+
Sbjct: 31 CAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADK--CFSRAGSVYCKEDFFK 84
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|397492168|ref|XP_003817000.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan paniscus]
Length = 390
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
+P PE C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK
Sbjct: 12 APAPE-IPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCK 68
Query: 70 QDFFR 74
DFFR
Sbjct: 69 DDFFR 73
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|354497584|ref|XP_003510899.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Cricetulus
griseus]
Length = 401
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH+PL CFSR ++YCK DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAER--CFSRGESVYCKDDFFK 87
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
Length = 387
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C PL + CFSR G++YCK+DFF+
Sbjct: 31 CAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADK--CFSRAGSVYCKEDFFK 84
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKANLSEK--CFSREGKLYCKNDFFR 58
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C PL + CFSR G++YCK+DFF+
Sbjct: 5 CAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADK--CFSRAGSVYCKEDFFK 58
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L DR WH CLQC+ CH+ L+ + CF+R+G ++CK DFF+
Sbjct: 63 CGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEK--CFARNGQLFCKDDFFKRYGT 120
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T V
Sbjct: 121 KCAACDLGIPPTQV 134
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L DR WH CLQC+ CH+ L+ + CF+R+G ++CK DFF+
Sbjct: 63 CGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEK--CFARNGQLFCKDDFFKRYGT 120
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T V
Sbjct: 121 KCAACDLGIPPTQV 134
>gi|397492166|ref|XP_003816999.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]
Length = 401
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFFR
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFR 84
>gi|397492170|ref|XP_003817001.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Pan paniscus]
Length = 377
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFFR
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFR 60
>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
Length = 389
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C PL + CFSR G++YCK+DFF+
Sbjct: 31 CAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADK--CFSRAGSVYCKEDFFK 84
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Sus scrofa]
Length = 402
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECXTNLSEK--CFSREGKLYCKNDFFR 58
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|444723048|gb|ELW63713.1| LIM/homeobox protein Lhx5 [Tupaia chinensis]
Length = 610
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|426247330|ref|XP_004017439.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Ovis
aries]
Length = 386
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEK--CFSREGKLYCKNDFFR 58
>gi|334327218|ref|XP_001378455.2| PREDICTED: LIM/homeobox protein Lhx5-like [Monodelphis domestica]
Length = 303
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 58
>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
Length = 449
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|62020648|gb|AAH20470.1| LHX1 protein, partial [Homo sapiens]
Length = 260
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|190613352|pdb|2JTN|A Chain A, Nmr Solution Structure Of A Ldb1-Lid:lhx3-Lim Complex
Length = 182
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 59 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 116
Query: 75 Y--SQARYPDLPIPKTLV 90
++ L IP T V
Sbjct: 117 RFGTKCAACQLGIPPTQV 134
>gi|432113616|gb|ELK35898.1| LIM/homeobox protein Lhx1 [Myotis davidii]
Length = 272
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|441623345|ref|XP_003279691.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3
[Nomascus leucogenys]
Length = 419
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYS 76
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+ +
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFKXA 91
>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
Length = 545
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 126 CGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDK--CFARNGQLFCKEDFFKRYGT 183
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 184 KCSACDMGIPPTQV 197
>gi|326205258|dbj|BAJ84011.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 386
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
+P PE C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK
Sbjct: 12 APAPE-IPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCK 68
Query: 70 QDFFR 74
DFF+
Sbjct: 69 DDFFK 73
>gi|431898999|gb|ELK07369.1| LIM/homeobox protein Lhx3 [Pteropus alecto]
Length = 357
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK+DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKEDFFK 87
>gi|194226030|ref|XP_001918019.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Equus
caballus]
Length = 401
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 87
>gi|348574776|ref|XP_003473166.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Cavia porcellus]
Length = 403
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|402896087|ref|XP_003911139.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Papio anubis]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|7657303|ref|NP_055379.1| LIM/homeobox protein Lhx3 isoform b [Homo sapiens]
gi|7110145|gb|AAF36809.1|AF156889_1 LIM homeobox protein 3 isoform b [Homo sapiens]
gi|119608611|gb|EAW88205.1| LIM homeobox 3, isoform CRA_a [Homo sapiens]
gi|157169604|gb|AAI52819.1| LIM homeobox 3 [synthetic construct]
gi|162318656|gb|AAI56736.1| LIM homeobox 3 [synthetic construct]
gi|307685965|dbj|BAJ20913.1| LIM homeobox 3 [synthetic construct]
gi|326205262|dbj|BAJ84013.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|403301480|ref|XP_003941417.1| PREDICTED: LIM/homeobox protein Lhx3 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|395844276|ref|XP_003794888.1| PREDICTED: LIM/homeobox protein Lhx3 [Otolemur garnettii]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAER--CFSRGESVYCKDDFFK 89
>gi|297685716|ref|XP_002820429.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pongo abelii]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|296191167|ref|XP_002743507.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Callithrix
jacchus]
Length = 402
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|109109777|ref|XP_001096075.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Macaca mulatta]
Length = 397
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|84490413|ref|NP_001033709.1| LIM/homeobox protein Lhx3 [Bos taurus]
gi|62952823|gb|AAY23167.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|62952825|gb|AAY23168.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|296482071|tpg|DAA24186.1| TPA: LIM homeobox protein 3 [Bos taurus]
Length = 403
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAER--CFSRGESVYCKDDFFK 89
>gi|109109779|ref|XP_001096188.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Macaca mulatta]
Length = 402
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|402896085|ref|XP_003911138.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Papio anubis]
Length = 397
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L DR WH CLQC+ C V L+ + CF+R+G ++CK DFF+
Sbjct: 175 CGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEK--CFARNGQLFCKDDFFKRYGT 232
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T V
Sbjct: 233 KCAACDLGIPPTQV 246
>gi|449477358|ref|XP_004176635.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Taeniopygia guttata]
Length = 328
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFF+Y
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEK--CFSREGKLYCKNDFFQY 59
>gi|30023847|ref|NP_835258.1| LIM/homeobox protein Lhx3 isoform a [Homo sapiens]
gi|12643415|sp|Q9UBR4.2|LHX3_HUMAN RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3
gi|7110143|gb|AAF36808.1|AF156888_1 LIM homeobox protein 3 isoform a [Homo sapiens]
gi|16565927|gb|AAL26314.1| LIM homeobox protein 3 [Homo sapiens]
gi|119608612|gb|EAW88206.1| LIM homeobox 3, isoform CRA_b [Homo sapiens]
gi|326205254|dbj|BAJ84009.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205256|dbj|BAJ84010.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205264|dbj|BAJ84014.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 397
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|296191169|ref|XP_002743508.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Callithrix
jacchus]
Length = 397
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 84
>gi|402896089|ref|XP_003911140.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Papio anubis]
Length = 373
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 60
>gi|296191171|ref|XP_002743509.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Callithrix
jacchus]
Length = 373
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 60
>gi|308235933|ref|NP_001184116.1| LIM/homeobox protein Lhx3 [Canis lupus familiaris]
gi|300837161|gb|ADK38612.1| LIM homeodomain protein 3 isoform LHX3b [Canis lupus familiaris]
Length = 403
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|449509311|ref|XP_004174248.1| PREDICTED: LIM/homeobox protein Lhx4-like [Taeniopygia guttata]
Length = 100
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 9 SSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYC 68
SSP E C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YC
Sbjct: 37 SSPLGAEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFSRAGSVYC 94
Query: 69 KQDFFR 74
K+DFF+
Sbjct: 95 KEDFFK 100
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 58
>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
Length = 451
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHSQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|260793680|ref|XP_002591839.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277050|gb|EEN47850.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 278
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CLQC+ C L + CFSR G++YCK DFFR
Sbjct: 40 KCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDK--CFSRDGHVYCKDDFFR 94
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 58
>gi|391759011|dbj|BAM22649.1| LIM homeobox 3/4, partial [Eptatretus burgeri]
Length = 205
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC PI DRF L A++R WH CL+C C PL CFSR G +YCK+DFFR
Sbjct: 32 CGGCSLPIGDRFLLKALERSWHASCLRCRDCQSPLSER--CFSRDGALYCKEDFFR 85
>gi|194390004|dbj|BAG60518.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|348543221|ref|XP_003459082.1| PREDICTED: LIM/homeobox protein Lhx9-like [Oreochromis niloticus]
Length = 509
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 6 DDSSSPCP---EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSR 62
++S SP +E +C GCG+ ++DRF+LLA R WH CL+C+ C L + S + R
Sbjct: 156 NNSQSPTAVSIQEPMTCAGCGEQVLDRFFLLAAGRVWHNPCLRCSQCQCELQTHPSLYWR 215
Query: 63 HGNIYCKQDFFR 74
GNIYC+QD+ R
Sbjct: 216 DGNIYCQQDYCR 227
>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L DR WH CLQC+ C V L+ + CF+R+G ++CK DFF+
Sbjct: 41 CGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEK--CFARNGQLFCKDDFFKRYGT 98
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T V
Sbjct: 99 KCAACDLGIPPTQV 112
>gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [Drosophila melanogaster]
Length = 440
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|17136270|ref|NP_476606.1| Lim3, isoform A [Drosophila melanogaster]
gi|7298537|gb|AAF53756.1| Lim3, isoform A [Drosophila melanogaster]
Length = 440
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|195580083|ref|XP_002079885.1| GD21780 [Drosophila simulans]
gi|194191894|gb|EDX05470.1| GD21780 [Drosophila simulans]
Length = 438
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|149058349|gb|EDM09506.1| LIM homeobox protein 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 11 PCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQ 70
P E C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+
Sbjct: 8 PLTSEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKE 65
Query: 71 DFFR 74
DFF+
Sbjct: 66 DFFK 69
>gi|196049633|pdb|2RGT|A Chain A, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
gi|196049634|pdb|2RGT|B Chain B, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
Length = 169
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E C GC Q I+DRF L A+DR WH CL+C+ CHVPL CFSR ++YCK DFF+
Sbjct: 5 EIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER--CFSRGESVYCKDDFFK 62
Query: 75 Y--SQARYPDLPIPKTLV 90
++ L IP T V
Sbjct: 63 RFGTKCAACQLGIPPTQV 80
>gi|194879752|ref|XP_001974294.1| GG21652 [Drosophila erecta]
gi|190657481|gb|EDV54694.1| GG21652 [Drosophila erecta]
Length = 442
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|195438224|ref|XP_002067037.1| GK24239 [Drosophila willistoni]
gi|194163122|gb|EDW78023.1| GK24239 [Drosophila willistoni]
Length = 448
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
Length = 442
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
Length = 444
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 42 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 99
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 100 KCSACDMGIPPTQV 113
>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
Length = 555
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 179
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 180 KCSACDMGIPPTQV 193
>gi|386769869|ref|NP_001246087.1| Lim3, isoform E [Drosophila melanogaster]
gi|383291572|gb|AFH03761.1| Lim3, isoform E [Drosophila melanogaster]
Length = 405
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 7 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 64
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 65 KCSACDMGIPPTQV 78
>gi|326924792|ref|XP_003208609.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4-like
[Meleagris gallopavo]
Length = 384
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 11 PC-PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
PC P E C GC Q I+D+F L +DR WH CL+CA C + L CF+R G++YCK
Sbjct: 18 PCGPGEIPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFARAGSVYCK 75
Query: 70 QDFFR 74
+DFF+
Sbjct: 76 EDFFK 80
>gi|225581041|gb|ACN94618.1| GA10505 [Drosophila miranda]
Length = 499
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 98 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 155
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 156 KCSACDMGIPPTQV 169
>gi|426222898|ref|XP_004005617.1| PREDICTED: LIM/homeobox protein Lhx3 [Ovis aries]
Length = 401
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 21 GCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
GC QPI+DRF L A+ R WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 GCAQPILDRFTLKALGRHWHSKCLKCSDCHAPLAER--CFSRGESVYCKDDFFK 87
>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
Length = 520
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 179
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 180 KCSACDMGIPPTQV 193
>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
Length = 523
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 127 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 184
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 185 KCSACDMGIPPTQV 198
>gi|449282069|gb|EMC88978.1| LIM/homeobox protein Lhx1 [Columba livia]
Length = 400
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|195164566|ref|XP_002023117.1| GL21131 [Drosophila persimilis]
gi|194105202|gb|EDW27245.1| GL21131 [Drosophila persimilis]
Length = 490
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 98 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 155
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 156 KCSACDMGIPPTQV 169
>gi|25453086|sp|O97581.1|LHX3_PIG RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
AltName: Full=Homeobox protein P-LIM
gi|4091889|gb|AAC99331.1| LIM homeodomain transcription factor [Sus scrofa]
Length = 383
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 16 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESLYCKDDFFK 69
>gi|198473411|ref|XP_001356286.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
gi|198139444|gb|EAL33349.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 99 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 156
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 157 KCSACDMGIPPTQV 170
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKTDFFR 58
>gi|195164562|ref|XP_002023115.1| GL21181 [Drosophila persimilis]
gi|194105200|gb|EDW27243.1| GL21181 [Drosophila persimilis]
Length = 436
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY-S 76
CGGC + I+DRF L ++R WH CLQC+ CH L+ + CF+R+G ++CK+DFF RY +
Sbjct: 48 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDK--CFARNGQLFCKEDFFKRYGT 105
Query: 77 QARYPDLPIPKTLV 90
+ D+ IP T V
Sbjct: 106 KCSACDMGIPPTQV 119
>gi|449479889|ref|XP_004177057.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Taeniopygia guttata]
Length = 419
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|344238818|gb|EGV94921.1| LIM/homeobox protein Lhx1 [Cricetulus griseus]
Length = 84
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 402
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CLQC+ C L + CFSR G++YCK DFFR
Sbjct: 41 CAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDK--CFSRDGHVYCKDDFFR 94
>gi|126307650|ref|XP_001371228.1| PREDICTED: LIM/homeobox protein Lhx1-like [Monodelphis domestica]
Length = 412
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYS 76
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR S
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFRAS 59
>gi|301778549|ref|XP_002924694.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Ailuropoda melanoleuca]
Length = 365
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
+E C GC Q I+DRF L A+DR WH CL+C CH PL CFSR ++YCK DFF
Sbjct: 29 QEIPLCAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAER--CFSRGESVYCKDDFF 86
Query: 74 R 74
+
Sbjct: 87 K 87
>gi|147902022|ref|NP_001084038.1| LIM/homeobox protein Lhx5 [Xenopus laevis]
gi|1708831|sp|P37137.2|LHX5_XENLA RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-5;
Short=xLIM-5; AltName: Full=xLIM-2A
gi|840658|gb|AAA99464.1| LIM class homeodomain protein [Xenopus laevis]
gi|54311470|gb|AAH84744.1| Lim5/Lhx5 protein [Xenopus laevis]
Length = 402
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKTDFFR 58
>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
Length = 402
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CLQC+ C L + CFSR G++YCK DFFR
Sbjct: 41 CAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDK--CFSRDGHVYCKDDFFR 94
>gi|426363578|ref|XP_004048915.1| PREDICTED: LIM/homeobox protein Lhx3 [Gorilla gorilla gorilla]
Length = 304
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|426238599|ref|XP_004013238.1| PREDICTED: LIM/homeobox protein Lhx1 [Ovis aries]
Length = 388
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|30410785|ref|NP_005559.2| LIM/homeobox protein Lhx1 [Homo sapiens]
gi|60416412|sp|P48742.2|LHX1_HUMAN RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=hLim-1
gi|75517203|gb|AAI01675.1| LIM homeobox 1 [Homo sapiens]
gi|85565997|gb|AAI11937.1| LIM homeobox 1 [Homo sapiens]
gi|119577978|gb|EAW57574.1| LIM homeobox 1 [Homo sapiens]
gi|167773161|gb|ABZ92015.1| LIM homeobox 1 [synthetic construct]
gi|208966670|dbj|BAG73349.1| LIM homeobox 1 [synthetic construct]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/homeobox protein Lhx1 [Callithrix jacchus]
Length = 406
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|395506420|ref|XP_003757530.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Sarcophilus
harrisii]
Length = 403
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C PL + CFSR +YCK+DFF+
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEK--CFSRGDGVYCKEDFFK 89
>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
Length = 481
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PII+RF L +DR WH C+ C C PL + CFSR G +YC+QDF+R
Sbjct: 6 CAGCDRPIIERFLLTVLDRAWHAQCVLCVDCQAPLTDK--CFSRDGRLYCRQDFYR 59
>gi|395845905|ref|XP_003795658.1| PREDICTED: LIM/homeobox protein Lhx1 [Otolemur garnettii]
Length = 407
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/homeobox protein Lhx1 [Sarcophilus harrisii]
Length = 406
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|549846|gb|AAA21644.1| LIM domain transcription factor LIM-1 [Homo sapiens]
Length = 404
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|55846812|gb|AAV67410.1| LIM homeobox protein 1 [Macaca fascicularis]
Length = 403
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 54
>gi|45382269|ref|NP_990744.1| LIM/homeobox protein Lhx1 [Gallus gallus]
gi|1708826|sp|P53411.1|LHX1_CHICK RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|531183|gb|AAA62173.1| amino acid feature: homeodomain, bp 674 .. 853; amino acid
feature: LIM2, bp 326 .. 481; amino acid feature: LIM1,
bp 149 ..292 [Gallus gallus]
Length = 406
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|157428018|ref|NP_001098917.1| LIM/homeobox protein Lhx1 [Bos taurus]
gi|358417202|ref|XP_003583582.1| PREDICTED: LIM/homeobox protein Lhx1-like [Bos taurus]
gi|157279406|gb|AAI53213.1| LHX1 protein [Bos taurus]
gi|296477035|tpg|DAA19150.1| TPA: LIM homeobox protein 1 [Bos taurus]
gi|440905066|gb|ELR55504.1| LIM/homeobox protein Lhx1 [Bos grunniens mutus]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|76573889|ref|NP_001029088.1| LIM/homeobox protein Lhx1 [Pan troglodytes]
gi|297700651|ref|XP_002827352.1| PREDICTED: LIM/homeobox protein Lhx1 [Pongo abelii]
gi|311267821|ref|XP_003131754.1| PREDICTED: LIM/homeobox protein Lhx1-like [Sus scrofa]
gi|348567695|ref|XP_003469634.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cavia porcellus]
gi|359320451|ref|XP_003639347.1| PREDICTED: LIM/homeobox protein Lhx1-like [Canis lupus
familiaris]
gi|397494263|ref|XP_003818003.1| PREDICTED: LIM/homeobox protein Lhx1 [Pan paniscus]
gi|402899902|ref|XP_003912923.1| PREDICTED: LIM/homeobox protein Lhx1 [Papio anubis]
gi|403274736|ref|XP_003929119.1| PREDICTED: LIM/homeobox protein Lhx1 [Saimiri boliviensis
boliviensis]
gi|410980542|ref|XP_003996636.1| PREDICTED: LIM/homeobox protein Lhx1 [Felis catus]
gi|426348609|ref|XP_004041924.1| PREDICTED: LIM/homeobox protein Lhx1 [Gorilla gorilla gorilla]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|56122252|gb|AAV74277.1| LIM homeobox protein 1 [Saimiri boliviensis]
gi|56122342|gb|AAV74322.1| LIM homeobox protein 1 [Pan troglodytes]
gi|355568607|gb|EHH24888.1| LIM/homeobox protein Lhx1 [Macaca mulatta]
gi|444720995|gb|ELW61755.1| LIM/homeobox protein Lhx1 [Tupaia chinensis]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|6678688|ref|NP_032524.1| LIM/homeobox protein Lhx1 [Mus musculus]
gi|94400804|ref|NP_665887.3| LIM/homeobox protein Lhx1 [Rattus norvegicus]
gi|354477124|ref|XP_003500772.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cricetulus griseus]
gi|51702761|sp|P63007.1|LHX1_RAT RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=Rlim
gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein LMX-2;
AltName: Full=Homeobox protein Lim-1
gi|2144068|pir||I58187 homeotic protein lim-1 - rat
gi|425217|emb|CAA81797.1| lim1 [Mus musculus]
gi|559636|gb|AAC60696.1| transcription factor [Rattus sp.]
gi|587463|emb|CAA57164.1| lmx2 [Mesocricetus auratus]
gi|4104801|gb|AAD02169.1| homeobox protein Lim1 [Mus musculus]
gi|62201098|gb|AAH92374.1| Lhx1 protein [Mus musculus]
gi|148683791|gb|EDL15738.1| LIM homeobox protein 1 [Mus musculus]
gi|149053699|gb|EDM05516.1| LIM homeobox protein 1 [Rattus norvegicus]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|126302627|ref|XP_001366305.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Monodelphis
domestica]
Length = 403
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C PL + CFSR +YCK+DFF+
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEK--CFSRGDGVYCKEDFFK 89
>gi|291405647|ref|XP_002719296.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|431890885|gb|ELK01764.1| LIM/homeobox protein Lhx1 [Pteropus alecto]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|148225925|ref|NP_001084128.1| LIM/homeobox protein Lhx1 [Xenopus laevis]
gi|267419|sp|P29674.1|LHX1_XENLA RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1;
Short=Xlim1; Short=x-Lhx1; Short=xLIM-1
gi|64830|emb|CAA45353.1| homeobox protein [Xenopus laevis]
gi|213623130|gb|AAI69338.1| Homeobox protein [Xenopus laevis]
gi|213623134|gb|AAI69340.1| Homeobox protein [Xenopus laevis]
Length = 403
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|154147696|ref|NP_001093698.1| LIM homeobox 1 [Xenopus (Silurana) tropicalis]
gi|138519843|gb|AAI35732.1| lhx1 protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/homeobox protein Lhx1-like [Loxodonta africana]
Length = 406
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C L + CFSR G +YC++DFFR
Sbjct: 26 CAGCERPILDRFLLNVLDRAWHAKCVQCVECRSNLTDK--CFSRDGKLYCREDFFR 79
>gi|18858973|ref|NP_571291.1| LIM/homeobox protein Lhx1 [Danio rerio]
gi|2497670|sp|Q90476.1|LHX1_DANRE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox
protein 1; AltName: Full=Homeobox protein Lim-1
gi|577525|gb|AAA92157.1| homeodomain protein [Danio rerio]
gi|190336961|gb|AAI62664.1| LIM homeobox 1a [Danio rerio]
gi|190339482|gb|AAI62396.1| LIM homeobox 1a [Danio rerio]
Length = 405
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|395506422|ref|XP_003757531.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Sarcophilus
harrisii]
Length = 401
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C PL + CFSR +YCK+DFF+
Sbjct: 34 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEK--CFSRGDGVYCKEDFFK 87
>gi|410979495|ref|XP_003996119.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Felis
catus]
Length = 309
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHAPLAER--CFSRGESVYCKDDFFK 87
>gi|126302625|ref|XP_001366249.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Monodelphis
domestica]
Length = 401
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C PL + CFSR +YCK+DFF+
Sbjct: 34 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEK--CFSRGDGVYCKEDFFK 87
>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
purpuratus]
Length = 545
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GC PI+DRF L VDR WH CL+C C+ L CFSR G ++CK+DFF+
Sbjct: 145 SLCAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDR--CFSRDGGVFCKEDFFK 200
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Nomascus leucogenys]
Length = 374
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L DR WH CLQC+ C + L + CF+R+G ++CK+DFF+
Sbjct: 101 CGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLTDK--CFARNGQLFCKEDFFKRFGT 158
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T V
Sbjct: 159 KCAGCDLGIPPTQV 172
>gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGRLYCKNDFFR 57
>gi|196011854|ref|XP_002115790.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
gi|190581566|gb|EDV21642.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
Length = 292
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GC PI D+F L +DR+WH C+QC+ C V L + CFSR G +YC+ DF+R
Sbjct: 3 SCAGCQLPICDKFLLSVLDRKWHTKCVQCSQCKVQLSEK--CFSRDGKLYCRNDFYR 57
>gi|351696664|gb|EHA99582.1| LIM/homeobox protein Lhx1 [Heterocephalus glaber]
Length = 406
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|410930167|ref|XP_003978470.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 408
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGRLYCKNDFFR 57
>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 407
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGRLYCKNDFFR 57
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L DR WH CLQC+ C + L + CF+R+G ++CK+DFF+
Sbjct: 68 CGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLTDK--CFARNGQLFCKEDFFKRFGT 125
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T V
Sbjct: 126 KCAGCDLGIPPTQV 139
>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
Length = 485
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GC PI+DRF L VDR WH CL+C C+ L CFSR G ++CK+DFF+
Sbjct: 85 SLCAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDR--CFSRDGGVFCKEDFFK 140
>gi|335295820|ref|XP_003357609.1| PREDICTED: LIM/homeobox protein Lhx4-like [Sus scrofa]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
boliviensis]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|344278250|ref|XP_003410909.1| PREDICTED: LIM/homeobox protein Lhx4-like [Loxodonta africana]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|345317972|ref|XP_003429957.1| PREDICTED: hypothetical protein LOC100681317 [Ornithorhynchus
anatinus]
Length = 217
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P E C GC Q I+DRF L +DR WH CL+C+ C PL + CFSR ++YCK+DF
Sbjct: 158 PLEIPLCAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQTPLTEK--CFSRGDSVYCKEDF 215
Query: 73 FR 74
F+
Sbjct: 216 FK 217
>gi|170051196|ref|XP_001861655.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872532|gb|EDS35915.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 284
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C CH PL + CFSR +YC+ DFFR
Sbjct: 108 CAGCNKPILDKFLLNVLERGWHASCVRCCECHQPLSDK--CFSRESKLYCRNDFFR 161
>gi|426239972|ref|XP_004013890.1| PREDICTED: LIM/homeobox protein Lhx4 [Ovis aries]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|119611484|gb|EAW91078.1| LIM homeobox 4 [Homo sapiens]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|15375314|ref|NP_203129.1| LIM/homeobox protein Lhx4 [Homo sapiens]
gi|209572644|sp|Q969G2.2|LHX4_HUMAN RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox
protein 4
gi|14599448|gb|AAK70923.1|AF179849_1 LIM homeobox protein 4 [Homo sapiens]
gi|22094433|gb|AAM91896.1|AF405430_1 LIM homeobox protein 4 [Homo sapiens]
gi|15079940|gb|AAH11759.1| LIM homeobox 4 [Homo sapiens]
gi|123988108|gb|ABM83830.1| LIM homeobox 4 [synthetic construct]
gi|123999145|gb|ABM87154.1| LIM homeobox 4 [synthetic construct]
gi|261861646|dbj|BAI47345.1| LIM homeobox 4 [synthetic construct]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda
melanoleuca]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|190684642|ref|NP_034842.2| LIM/homeobox protein Lhx4 [Mus musculus]
gi|209572773|sp|P53776.4|LHX4_MOUSE RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox
protein 4
gi|148707456|gb|EDL39403.1| LIM homeobox protein 4, isoform CRA_b [Mus musculus]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|402857943|ref|XP_003893495.1| PREDICTED: LIM/homeobox protein Lhx4 [Papio anubis]
gi|355558975|gb|EHH15755.1| hypothetical protein EGK_01889 [Macaca mulatta]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|395824959|ref|XP_003785717.1| PREDICTED: LIM/homeobox protein Lhx4 [Otolemur garnettii]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|194210370|ref|XP_001914860.1| PREDICTED: LIM/homeobox protein Lhx4-like [Equus caballus]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|2384698|gb|AAB70190.1| homeobox protein Lim-1 [Xenopus laevis]
Length = 112
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|73960401|ref|XP_547420.2| PREDICTED: LIM/homeobox protein Lhx4 isoform 1 [Canis lupus
familiaris]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|410986072|ref|XP_003999336.1| PREDICTED: LIM/homeobox protein Lhx4 [Felis catus]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|300795912|ref|NP_001179714.1| LIM/homeobox protein Lhx4 [Bos taurus]
gi|296479119|tpg|DAA21234.1| TPA: LIM homeobox 4 [Bos taurus]
gi|440901216|gb|ELR52198.1| LIM/homeobox protein Lhx4 [Bos grunniens mutus]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
Length = 390
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|432115998|gb|ELK37137.1| LIM/homeobox protein Lhx4 [Myotis davidii]
Length = 389
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 29 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 82
>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
Length = 390
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|348578364|ref|XP_003474953.1| PREDICTED: LIM/homeobox protein Lhx4 [Cavia porcellus]
Length = 390
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|345325463|ref|XP_003430923.1| PREDICTED: hypothetical protein LOC100085508 [Ornithorhynchus
anatinus]
Length = 884
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
E+ C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF
Sbjct: 575 EKIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR--CFSRAGSVYCKEDFF 632
Query: 74 R 74
+
Sbjct: 633 K 633
>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
Length = 236
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 5 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 58
>gi|14579221|gb|AAK69169.1|AF282899_1 LIM homeobox protein [Homo sapiens]
gi|15146348|dbj|BAB62817.1| LIM homeobox 4 [Homo sapiens]
Length = 367
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 7 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 60
>gi|334853818|gb|AEH05849.1| Lhx3, partial [Capra hircus]
gi|334853820|gb|AEH05850.1| Lhx3, partial [Capra hircus]
Length = 124
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY--S 76
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+ +
Sbjct: 4 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAER--CFSRGESVYCKDDFFKRFGT 61
Query: 77 QARYPDLPIPKTLV 90
+ L IP T V
Sbjct: 62 KCAACQLGIPPTQV 75
>gi|355746127|gb|EHH50752.1| hypothetical protein EGM_01626, partial [Macaca fascicularis]
Length = 364
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 4 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 57
>gi|351699208|gb|EHB02127.1| LIM/homeobox protein Lhx4 [Heterocephalus glaber]
Length = 390
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 83
>gi|281354363|gb|EFB29947.1| hypothetical protein PANDA_009642 [Ailuropoda melanoleuca]
Length = 365
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 5 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 58
>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
Length = 190
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 1 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 54
>gi|4809173|gb|AAD30125.1|AF135415_1 LIM-homeobox protein [Mus musculus]
Length = 367
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 7 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 60
>gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/homeobox protein Lhx5-like [Takifugu rubripes]
Length = 396
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C+ L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEK--CFSRDGKLYCKMDFFR 58
>gi|397508667|ref|XP_003824769.1| PREDICTED: LIM/homeobox protein Lhx4 [Pan paniscus]
gi|410034179|ref|XP_524984.3| PREDICTED: LIM/homeobox protein Lhx4 [Pan troglodytes]
Length = 466
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 106 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 159
>gi|432894991|ref|XP_004076032.1| PREDICTED: LIM/homeobox protein Lhx1 [Oryzias latipes]
Length = 238
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR+
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGRLYCKNDFFRF 58
>gi|47551255|ref|NP_999810.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
gi|33286229|gb|AAQ01662.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
Length = 480
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G ++CK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEK--CFSREGKLFCKNDFFR 58
>gi|126294098|ref|XP_001365314.1| PREDICTED: LIM/homeobox protein Lhx2-like [Monodelphis domestica]
Length = 408
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 4 DRDDSSSPCP----EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSC 59
DR ++ + P + + C GCG I DR+ LLA D+QWH+ L+C C + E C
Sbjct: 34 DRGETETTIPSFTSDRAAFCAGCGGKISDRYSLLAGDKQWHMLSLKCWECKLIREWEFPC 93
Query: 60 FSRHGNIYCKQDFFR 74
FS+ G YCK+DF+R
Sbjct: 94 FSKDGTFYCKEDFYR 108
>gi|326205260|dbj|BAJ84012.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 89
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 89
>gi|167859076|gb|ACA04473.1| Lim1 [Strongylocentrotus purpuratus]
Length = 480
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G ++CK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEK--CFSREGKLFCKNDFFR 58
>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
Length = 391
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
+SS P+ C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++Y
Sbjct: 24 ASSEIPQ----CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR--CFSRAGSVY 77
Query: 68 CKQDFFR 74
CK+DFF+
Sbjct: 78 CKEDFFK 84
>gi|339238047|ref|XP_003380578.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
gi|316976506|gb|EFV59791.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
Length = 337
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF---FRY 75
C GC I D+FYLL +R WH+ CL+C C L +EL+CFSR I+CK+D+ F
Sbjct: 10 CSGCQATITDQFYLLVAERSWHIHCLRCCVCRCSLETELTCFSRGDLIFCKEDYSKQFSK 69
Query: 76 SQARYPDLPIPKTLVSFLYD 95
+R + +PK LV D
Sbjct: 70 RCSRCNRVVLPKDLVMRARD 89
>gi|10257388|dbj|BAB13725.1| transcription factor HpLim1 [Hemicentrotus pulcherrimus]
Length = 480
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR G ++CK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEK--CFSREGKLFCKNDFFR 58
>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
rubripes]
Length = 406
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P E C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK+DF
Sbjct: 29 PAEIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEK--CFSRGDSVYCKEDF 86
Query: 73 FR 74
F+
Sbjct: 87 FK 88
>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
harrisii]
Length = 659
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
E C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF
Sbjct: 36 EIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR--CFSRAGSVYCKEDFF 92
>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 390
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDR--CFSRAGSVYCKEDFFK 83
>gi|327270281|ref|XP_003219918.1| PREDICTED: LIM/homeobox protein Lhx4-like [Anolis carolinensis]
Length = 449
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 11 PCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQ 70
P PE C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+
Sbjct: 82 PLPE-IPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADR--CFSRAGSVYCKE 138
Query: 71 DFFR 74
DFF+
Sbjct: 139 DFFK 142
>gi|444730493|gb|ELW70875.1| LIM/homeobox protein Lhx4 [Tupaia chinensis]
Length = 768
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 148 EIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 205
>gi|348525932|ref|XP_003450475.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 399
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C C +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CASCEKPILDRFLLKVLDRPWHIKCVQCCDCKCSLTEK--CFSREGKLYCKNDFFR 57
>gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oryzias latipes]
Length = 396
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C+ L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHAKCVQCCDCNCNLTEK--CFSRDGKLYCKMDFFR 58
>gi|444521209|gb|ELV13150.1| LIM/homeobox protein Lhx3 [Tupaia chinensis]
Length = 290
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L A+DR WH CL+C CH PL CFSR ++YCK DFF+
Sbjct: 32 CAGCDQHILDRFILKALDRHWHSQCLKCCDCHAPLAER--CFSRGESVYCKDDFFK 85
>gi|295656539|gb|ADG26732.1| Lhx1/5 [Platynereis dumerilii]
Length = 291
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C H CFSR G +YC+ DFFR
Sbjct: 4 CAGCDRPILDRFLLNVLDRAWHAQCVQCTECKA--HLTDKCFSREGKLYCRDDFFR 57
>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
leucogenys]
Length = 415
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 74 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 127
>gi|18858979|ref|NP_571282.1| LIM homeobox 1b [Danio rerio]
gi|2155289|gb|AAB58796.1| LIM class homeodomain protein [Danio rerio]
gi|190336839|gb|AAI62280.1| LIM homeobox 1b [Danio rerio]
gi|190340149|gb|AAI62303.1| LIM homeobox 1b [Danio rerio]
Length = 402
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C L CFSR G +YCK DFFR
Sbjct: 4 CAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDR--CFSREGRLYCKNDFFR 57
>gi|74187870|dbj|BAE24561.1| unnamed protein product [Mus musculus]
Length = 406
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DR L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CAGCKRPILDRLLLNVLDRAWHVKCVQCCECKCNLTEK--CFSREGKLYCKNDFFR 57
>gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C L + CFSR G +YCK DFFR
Sbjct: 164 CAGCERPILDRFLLNVLDRAWHAKCVQCCECSCNLTEK--CFSRDGKLYCKMDFFR 217
>gi|344254045|gb|EGW10149.1| LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 397
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 6 EIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDR--CFSRAGSVYCKEDFFK 63
>gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oreochromis niloticus]
Length = 396
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C+ L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEK--CFSRDGKLYCKIDFFR 58
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+DRF L +DR WH CL C C PL + CF+R+G +YCK DFF+
Sbjct: 24 CGGCQELILDRFILKVLDRTWHAKCLNCNDCGGPLTDK--CFARNGQVYCKDDFFK 77
>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
occidentalis]
Length = 408
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I+DRF L ++R WH CL+C+ C PL ++ CF+R G++YCK DFF+
Sbjct: 54 CAGCGDIILDRFILKVLERPWHSKCLKCSDCQAPLANK--CFARAGHLYCKDDFFK 107
>gi|18858977|ref|NP_571293.1| LIM/homeobox protein Lhx5 [Danio rerio]
gi|1708830|sp|P52889.1|LHX5_DANRE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox
protein 5; AltName: Full=Homeobox protein LIM-5
gi|840664|gb|AAA99465.1| LIM class homeodomain protein [Danio rerio]
gi|68534671|gb|AAH98523.1| LIM homeobox 5 [Danio rerio]
Length = 399
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C+ L + CFSR G +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEK--CFSRDGKLYCKIDFFR 58
>gi|363736513|ref|XP_001235592.2| PREDICTED: LIM/homeobox protein Lhx4 [Gallus gallus]
Length = 374
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CF+R G++YCK+DFF+
Sbjct: 16 CAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAER--CFARAGSVYCKEDFFK 69
>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
Length = 555
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GC +PI+D+F L +DR WH C++CA CH L + C+SR G I CK DF+R
Sbjct: 116 SCAGCDKPIMDKFLLNVLDRAWHAECVKCADCHGTLSDK--CYSRDGKILCKPDFYR 170
>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
Length = 399
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P E C GC Q I+DRF L +DR WH CL+C+ C L + CFSR +YCK+DF
Sbjct: 26 PAEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEK--CFSRGDGVYCKEDF 83
Query: 73 FR 74
F+
Sbjct: 84 FK 85
>gi|291397314|ref|XP_002715058.1| PREDICTED: LIM homeobox protein 4 [Oryctolagus cuniculus]
Length = 390
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G+ YCK+DFF+
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSFYCKEDFFK 83
>gi|46276325|gb|AAS86421.1| lhx9 [Oryzias latipes]
Length = 237
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 33 LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQAR 79
LAVD+QWHL CL+C C + L SEL+CF++ G+IYCK+D++R+S R
Sbjct: 1 LAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRFSVQR 47
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC C L + CFSR +YCK DFFR
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEK--CFSRDSKLYCKTDFFR 58
>gi|6572499|gb|AAF17291.1| LHX3 protein [Homo sapiens]
gi|6572501|gb|AAF17292.1| LHX3 protein [Homo sapiens]
Length = 370
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C G Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 4 CAGRDQHILDRFILKALDRHWHSKCLKCSDCHTPLAER--CFSRGESVYCKDDFFK 57
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C C +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CTSCEKPILDRFLLKVLDRPWHVKCVQCCDCKCTLSEK--CFSREGKLYCKNDFFR 57
>gi|410903464|ref|XP_003965213.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 3 [Takifugu
rubripes]
Length = 390
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK+DFF+
Sbjct: 19 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEK--CFSRGDSVYCKEDFFK 72
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG PI D+F L +RQWH+ CL+C+ C PL +C++R +++CK D+ R
Sbjct: 51 CTGCGGPIQDKFLLKVGERQWHVKCLRCSVCQTPLGRHTTCYTREADVFCKADYIR 106
>gi|291232097|ref|XP_002736028.1| PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]
Length = 498
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH+ C+QC+ C+ L + C+SR G +YC+ DF R
Sbjct: 5 CAGCDRPILDRFLLNVLDRAWHVKCVQCSDCNCTLSDK--CYSREGKLYCRTDFVR 58
>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
Length = 471
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C C +PI+DRF L +DR WH C+QC+ C L + CFSR G ++C+ DFFR
Sbjct: 4 CAACDRPILDRFLLNVLDRAWHAKCVQCSDCKTTLTDK--CFSRDGKLFCRNDFFR 57
>gi|449478428|ref|XP_002187534.2| PREDICTED: LIM/homeobox protein Lhx3 [Taeniopygia guttata]
Length = 665
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR +YCK+DFF+
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEK--CFSRGDGVYCKEDFFK 81
>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
rubripes]
Length = 399
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK+DFF+
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEK--CFSRGDSVYCKEDFFK 81
>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
Length = 342
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR +YCK+DFF+
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEK--CFSRGDGVYCKEDFFK 57
>gi|390345093|ref|XP_787486.3| PREDICTED: LIM domain transcription factor LMO4-B-like
[Strongylocentrotus purpuratus]
Length = 208
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
C GCG IIDRF L AVDR WH GCL+C+ C+V L SCFS+ G I CK+D+ R
Sbjct: 59 CAGCGGKIIDRFLLHAVDRFWHTGCLKCSCCNVQLGDIGHSCFSKGGMILCKKDYLR 115
>gi|339961229|pdb|3MMK|A Chain A, The Structural Basis For Partial Redundancy In A Class
Of Transcription Factors, The Lim-Homeodomain Proteins,
In Neural Cell Type Specification
gi|339961230|pdb|3MMK|B Chain B, The Structural Basis For Partial Redundancy In A Class
Of Transcription Factors, The Lim-Homeodomain Proteins,
In Neural Cell Type Specification
Length = 169
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 9 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 62
>gi|391339813|ref|XP_003744241.1| PREDICTED: sodium-coupled monocarboxylate transporter 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
E + CGGCGQ I++R L + WH+ CL+C C L + +CF R N+YCKQD+
Sbjct: 450 ERGTICGGCGQLILERVQLQVDNCSWHVDCLRCCVCDCLLEKDSTCFFRDNNVYCKQDYA 509
Query: 74 R 74
R
Sbjct: 510 R 510
>gi|259013380|ref|NP_001158395.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
gi|90659991|gb|ABD97272.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
Length = 390
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC PI+DRF L DR WH CL+C C L + C+SR G +YCK+DFF+
Sbjct: 35 CSGCEHPILDRFILKVQDRAWHSKCLKCTDCQAQLSDK--CYSRGGQVYCKEDFFK 88
>gi|432899669|ref|XP_004076609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oryzias latipes]
Length = 402
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C C +PI+DRF L +DR WH+ C+QC C L + CFSR G +YCK DFFR
Sbjct: 4 CTSCEKPILDRFLLKVLDRPWHVKCVQCCECKCSLTEK--CFSRDGRLYCKNDFFR 57
>gi|241174222|ref|XP_002410980.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215495067|gb|EEC04708.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 62
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E+ +C CG+ I DRF L D WH CL+C C PL + SCF RHG++YC+ D+ R
Sbjct: 3 EQEACSACGELIADRFLLKVSDTSWHARCLRCCVCQTPLDHQPSCFVRHGSVYCRPDYVR 62
>gi|72535130|ref|NP_001025506.1| LIM/homeobox protein Lhx3 [Gallus gallus]
gi|1708828|sp|P53412.1|LHX3_CHICK RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3
gi|531185|gb|AAA62174.1| amino acid feature: LIM1, bp 82 .. 225; amino acid feature: LIM2,
bp 259 .. 414; amino acid feature: homeodomain, bp 457
.. 636 [Gallus gallus]
Length = 395
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR +YCK+DFF+
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEK--CFSRGDGVYCKEDFFK 81
>gi|168472435|gb|ACA24001.1| LHX3 [Bos taurus]
gi|169303108|gb|ACA53151.1| LHX3 [Bos taurus]
gi|169303110|gb|ACA53152.1| LHX3 [Bos taurus]
gi|169303144|gb|ACA53169.1| LHX3 [Bos taurus]
Length = 56
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
C GC Q I+DRF L A+DR WH CL+C+ CH PL CFSR ++YCK DFF
Sbjct: 4 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAER--CFSRGESVYCKDDFF 56
>gi|15146350|dbj|BAB62818.1| LIM homeobox 4 transcript variant [Homo sapiens]
Length = 60
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+DFF+
Sbjct: 7 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKEDFFK 60
>gi|158287501|ref|XP_309513.3| AGAP011134-PA [Anopheles gambiae str. PEST]
gi|157019681|gb|EAA05265.3| AGAP011134-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C CH PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERGWHATCVRCCECHQPLADK--CFSRESKLYCRNDFFR 80
>gi|18308156|gb|AAL67847.1|AF461699_1 LIM homeobox protein [Gallus gallus]
Length = 214
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR +YCK+DFF+
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEK--CFSRGDGVYCKEDFFK 81
>gi|148232304|ref|NP_001081623.1| LIM/homeobox protein Lhx3 [Xenopus laevis]
gi|547856|sp|P36200.1|LHX3_XENLA RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
Short=xLIM-3
gi|407072|emb|CAA80402.1| Xlim-3 [Xenopus laevis]
gi|213623314|gb|AAI69580.1| Xlim-3 protein [Xenopus laevis]
Length = 395
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C C + L + CFSR ++YCK DFF+
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEK--CFSRGDSVYCKDDFFK 81
>gi|157412000|gb|ABV54626.1| Lim homeobox protein 3 splice variant [Salmo salar]
Length = 379
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK+DFF+
Sbjct: 12 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADK--CFSRGDSVYCKEDFFK 65
>gi|211971017|ref|NP_001130018.1| LIM/homeobox protein Lhx3 [Salmo salar]
gi|157412002|gb|ABV54627.1| Lim homeobox protein 3 [Salmo salar]
Length = 395
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
+E C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK+DFF
Sbjct: 23 QEIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADK--CFSRGDSVYCKEDFF 80
Query: 74 R 74
+
Sbjct: 81 K 81
>gi|195163209|ref|XP_002022444.1| GL13034 [Drosophila persimilis]
gi|194104436|gb|EDW26479.1| GL13034 [Drosophila persimilis]
Length = 332
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 24 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 77
>gi|171544941|ref|NP_001116387.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
gi|157410515|gb|ABV53980.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
Length = 401
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK DFF+
Sbjct: 30 CAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQAQLAEK--CFSRGDSVYCKDDFFK 83
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I+DRF L +DR WH CL CA C+ L + CFS+ +YCK+DFFR
Sbjct: 144 CAGCGDAILDRFILKVLDRSWHSKCLMCADCNGHLSDK--CFSKGDKVYCKEDFFR 197
>gi|189238568|ref|XP_969484.2| PREDICTED: similar to LIM homeobox 1b [Tribolium castaneum]
Length = 497
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC C +PI+D+F L ++R WH C++C CH PL + CFSR ++C+ DFFR
Sbjct: 153 SCAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDK--CFSRENKLFCRNDFFR 207
>gi|241811701|ref|XP_002416451.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510915|gb|EEC20368.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 100
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
S C GCG PI+DR+ L ++ WH CLQC+ CH PL E SC+SR ++CK D+
Sbjct: 45 SLCAGCGLPIVDRYILRVMEHSWHESCLQCSVCHAPL--EQSCYSRDKKLFCKADY 98
>gi|270009219|gb|EFA05667.1| lim1 [Tribolium castaneum]
Length = 511
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC C +PI+D+F L ++R WH C++C CH PL + CFSR ++C+ DFFR
Sbjct: 77 SCAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDK--CFSRENKLFCRNDFFR 131
>gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L ++R WH CL+C+ C L + CFSR ++YCK+DFF+
Sbjct: 5 CAGCNQHIVDRFILKVLERHWHSKCLKCSDCQAQLAEK--CFSRGDSVYCKEDFFK 58
>gi|291240630|ref|XP_002740222.1| PREDICTED: LIM domain only 4-like [Saccoglossus kowalevskii]
Length = 180
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDFFR 74
SC GCG I+DRF L A+DR WH GCL+C C L EL SCFS+ G I CK+D+ R
Sbjct: 42 SCAGCGVKIMDRFLLHALDRYWHTGCLKCTCCGAQL-GELGPSCFSKGGMILCKKDYLR 99
>gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio]
Length = 374
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK DFF+
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADK--CFSRGDSVYCKDDFFK 57
>gi|18858975|ref|NP_571283.1| LIM/homeobox protein Lhx3 [Danio rerio]
gi|2497671|sp|Q90421.1|LHX3_DANRE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3
gi|1000342|gb|AAA76714.1| LIM homeobox protein [Danio rerio]
Length = 398
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK DFF+
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADK--CFSRGDSVYCKDDFFK 81
>gi|348535047|ref|XP_003455013.1| PREDICTED: LIM/homeobox protein Lhx3-like [Oreochromis niloticus]
Length = 400
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
+E C GC Q I+DRF L +DR WH CL+C+ C L + CF+R ++YCK DFF
Sbjct: 23 QEIPMCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLADK--CFTRGDSVYCKDDFF 80
Query: 74 R 74
+
Sbjct: 81 K 81
>gi|190336903|gb|AAI62627.1| LIM homeobox 3 [Danio rerio]
Length = 398
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DRF L +DR WH CL+C+ C L + CFSR ++YCK DFF+
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADK--CFSRGDSVYCKDDFFK 81
>gi|156373115|ref|XP_001629379.1| predicted protein [Nematostella vectensis]
gi|156216378|gb|EDO37316.1| predicted protein [Nematostella vectensis]
Length = 153
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 1 MLKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPL-HSELSC 59
M + + S S C GCG+ IIDRF LLA+D+ WH+ CL+C+ C L SC
Sbjct: 1 MEEQQLTSQSQVAASMRVCAGCGEKIIDRFLLLALDQYWHVNCLKCSCCEARLGEIGTSC 60
Query: 60 FSRHGNIYCKQDFFR 74
+S+ G I CK D+ R
Sbjct: 61 YSKGGMILCKTDYVR 75
>gi|47197702|emb|CAF89234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 57
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C C +PI+DRF L +DR WH+ C+ C C L + CFSR G +YCK DFFR
Sbjct: 4 CASCEKPILDRFLLKVLDRPWHVKCVHCCECKCTLSEK--CFSREGKLYCKNDFFR 57
>gi|432872837|ref|XP_004072149.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 346
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P K+ C CG I DR+ L + WHLGCL+C+ C LH SC+ ++ IYCK D+
Sbjct: 62 PAAKNQCANCGIEIHDRYLLKVNNLNWHLGCLECSVCRASLHQHSSCYVKNKEIYCKLDY 121
Query: 73 F 73
F
Sbjct: 122 F 122
>gi|88954018|gb|ABD59002.1| LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae]
Length = 464
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+C GC +P++DRF L +DR WH C++C+ C L + CF+R +YC++DFFR
Sbjct: 4 NCAGCERPVLDRFLLNVLDRAWHAKCVRCSDCSCRLTEK--CFTRDSKLYCREDFFR 58
>gi|242011465|ref|XP_002426470.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
gi|212510582|gb|EEB13732.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
Length = 394
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+C GC +PI+D+F L +DR WH C++C C L + CFSR G ++C+ DFFR
Sbjct: 32 ACAGCDKPILDKFLLNVLDRTWHAECVRCHDCRAALADK--CFSREGKLFCRNDFFR 86
>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
Length = 481
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+DR+ L DR WH GCL+C C L + CF+R+ +YC +DFF+
Sbjct: 136 CGGCHEMIVDRYVLKVSDRTWHAGCLRCVECRAMLSGK--CFARNNQLYCTEDFFK 189
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|324511990|gb|ADY44978.1| Protein lin-11 [Ascaris suum]
Length = 368
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC I+DR+ +D+ WH C+QCA C PL +CFSR G I C+QDF R
Sbjct: 4 CGGCNTAILDRYVFHVLDKTWHASCIQCADCKEPLTE--TCFSRDGLILCRQDFSR 57
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C L + CFSR G +YC+ DF++
Sbjct: 6 CAGCERPILDRFLLHVLDRSWHAKCVQCTDCRCSLIEK--CFSRDGKLYCRSDFYK 59
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC PI+DRF L +D+ WH CL+C C + L + C+SR G ++CK DF R
Sbjct: 119 CAGCHHPIVDRFILKVLDKPWHSKCLRCVDCDMLLTDK--CYSRDGEVFCKADFSRRFGT 176
Query: 79 RYP--DLPIPKTLV 90
R + PIP T V
Sbjct: 177 RCAGCNQPIPPTQV 190
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC+ C L + CFSR G ++C+ DF++
Sbjct: 6 CAGCERPILDRFLLHVLDRSWHAKCVQCSDCRCSLSEK--CFSRDGKLFCRSDFYK 59
>gi|242000638|ref|XP_002434962.1| homeobox protein Lim-1, putative [Ixodes scapularis]
gi|215498292|gb|EEC07786.1| homeobox protein Lim-1, putative [Ixodes scapularis]
Length = 59
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DRF L +DR WH C+QC C L + CFSR G ++C+ DFF+
Sbjct: 6 CAGCDRPILDRFLLNVLDRSWHAKCVQCCDCRCNLTEK--CFSRDGKLFCRNDFFK 59
>gi|340377757|ref|XP_003387395.1| PREDICTED: LIM/homeobox protein Lhx5-like [Amphimedon
queenslandica]
Length = 272
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI++RF + +D+ WH+ C++C+ C L + CFSR +YC+ DFFR
Sbjct: 6 CAGCSEPIMERFLMKVLDKSWHVQCVKCSDCQCLLSEK--CFSRDNKLYCRSDFFR 59
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E C GC PI DRF L D+ WH+ CL+C C++ L E SCF + +IYC+QD+ R
Sbjct: 57 ESLQCRGCSDPITDRFLLKVSDKIWHVSCLRCCVCNLVLEDEPSCFIKDDSIYCRQDYAR 116
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|195456664|ref|XP_002075233.1| GK16904 [Drosophila willistoni]
gi|194171318|gb|EDW86219.1| GK16904 [Drosophila willistoni]
Length = 506
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|195049216|ref|XP_001992673.1| GH24084 [Drosophila grimshawi]
gi|193893514|gb|EDV92380.1| GH24084 [Drosophila grimshawi]
Length = 501
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|195400977|ref|XP_002059092.1| GJ15180 [Drosophila virilis]
gi|194141744|gb|EDW58161.1| GJ15180 [Drosophila virilis]
Length = 498
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|195130757|ref|XP_002009817.1| GI15570 [Drosophila mojavensis]
gi|193908267|gb|EDW07134.1| GI15570 [Drosophila mojavensis]
Length = 503
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|348533440|ref|XP_003454213.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 392
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 11 PCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQ 70
P P K+ C CG I DR+ L + WHLGCL+C+ C L SC+ ++ IYCK
Sbjct: 106 PPPAAKNQCASCGMEIHDRYLLKVNNLNWHLGCLECSVCRASLRQHSSCYVKNKEIYCKL 165
Query: 71 DFF 73
D+F
Sbjct: 166 DYF 168
>gi|198437781|ref|XP_002124033.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 402
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I+DR YL D WH+GCL+C C PL + +CF + +YC+ D+ R
Sbjct: 39 CAGCHQVILDRSYLFVEDSYWHMGCLKCCACAQPLDNSRTCFVKDTRVYCRNDYKR 94
>gi|380029439|ref|XP_003698380.1| PREDICTED: uncharacterized protein LOC100872944 [Apis florea]
Length = 478
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 2 LKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SC 59
LK S P ++ C GCG I++R+ LLA+DR WH GCL+C++C L +E+ SC
Sbjct: 240 LKQEGGPSGPTGIQQ--CAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAAL-AEIGHSC 296
Query: 60 FSRHGNIYCKQDFFR 74
++R G I CK D+ R
Sbjct: 297 YTRSGMILCKSDYRR 311
>gi|328708425|ref|XP_001944208.2| PREDICTED: LIM/homeobox protein Lhx3-like [Acyrthosiphon pisum]
Length = 375
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC + I+DRF L ++R WH CL+C C L + CF+R+G ++CK DFF+
Sbjct: 45 CGGCQELILDRFILKVLERTWHARCLKCNECGATLADK--CFARNGMLFCKDDFFKRYGT 102
Query: 79 RYP--DLPIPKTLV 90
+ DL IP T +
Sbjct: 103 KCAGCDLGIPPTQI 116
>gi|321455236|gb|EFX66374.1| hypothetical protein DAPPUDRAFT_11288 [Daphnia pulex]
Length = 349
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC + I+D+F L +DR WH C++CA C L CFSR G +YC+ DFFR
Sbjct: 1 CAGCDRAILDKFLLTVLDRTWHAECVRCADCRNILAER--CFSRDGKLYCRTDFFR 54
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 17 SSCGGCGQPII-DRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
+ CGGCGQ + A D+ +HL C CA C L + E CK+DF R
Sbjct: 58 TKCGGCGQGLSPTDLVRKARDKVYHLRCFTCALCRRQLSTGEELYLLDDARFLCKEDFIR 117
Query: 75 YSQARYPDLPIPKTLVSFLYDKQGAASEPLLT 106
A P + S G A E LT
Sbjct: 118 GKAA-------PANITSLSSPICGRADEDGLT 142
>gi|56185681|gb|AAV84105.1| apterous [Euprymna scolopes]
Length = 423
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I +R+YL + WH CL+C C L +E SC+ R GN YC+ D+ R
Sbjct: 92 CAGCGDLITERYYLNVANNAWHFNCLKCYECKSTLDTERSCYERMGNYYCRDDYQR 147
>gi|242011268|ref|XP_002426377.1| LIM domain transcription factor LMO4, putative [Pediculus humanus
corporis]
gi|212510454|gb|EEB13639.1| LIM domain transcription factor LMO4, putative [Pediculus humanus
corporis]
Length = 256
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQ 70
C CGGCG I++RF L A+DR WH GCL+C+ CH L SCF++ G I CK
Sbjct: 90 CGSGLKICGGCGGKIVERFLLHALDRYWHNGCLKCSCCHAMLADIGSSCFTKAGMILCKT 149
Query: 71 DFFR 74
D+ R
Sbjct: 150 DYAR 153
>gi|350396214|ref|XP_003484481.1| PREDICTED: LIM/homeobox protein Lhx9-like [Bombus impatiens]
Length = 417
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 2 LKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SC 59
LK S P ++ C GCG I++R+ LLA+DR WH GCL+C++C L +E+ SC
Sbjct: 179 LKQEGGPSGPTGIQQ--CAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAAL-AEIGHSC 235
Query: 60 FSRHGNIYCKQDFFR 74
++R G I CK D+ R
Sbjct: 236 YTRSGMILCKSDYRR 250
>gi|307197382|gb|EFN78657.1| LIM/homeobox protein Lhx5 [Harpegnathos saltator]
Length = 142
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
SC GC +PI+D++ L +DR WH+ C++C C + L + CFSR ++C+ DFF
Sbjct: 20 SCAGCDKPIMDQYLLNVLDRAWHVECVRCFDCRITLQDK--CFSREAKLFCRNDFF 73
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 11 PCPEEKS--SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYC 68
P EE S CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++C
Sbjct: 101 PIKEEPSIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFC 158
Query: 69 KQDFFRYSQ 77
K DFF+Y +
Sbjct: 159 KDDFFKYGR 167
>gi|195354923|ref|XP_002043945.1| GM13699 [Drosophila sechellia]
gi|194129190|gb|EDW51233.1| GM13699 [Drosophila sechellia]
Length = 424
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+D+F L ++R WH C++C C PL + CFSR +YC+ DFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDK--CFSRESKLYCRNDFFR 80
>gi|357631671|gb|EHJ79140.1| lim1 [Danaus plexippus]
Length = 162
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+C GC +PI+D+F L ++R WH C++CA C PL + C+SR ++C+ DFFR
Sbjct: 2 ACAGCEKPILDKFLLHVLERAWHAACVRCADCRAPLADK--CYSRDNKLFCRNDFFR 56
>gi|443704461|gb|ELU01523.1| hypothetical protein CAPTEDRAFT_46615, partial [Capitella teleta]
Length = 122
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDFFR 74
C GCG IIDRF L A+DR WH GCL+C+ C L EL SCF++ G I CK+D+ R
Sbjct: 3 CAGCGGKIIDRFLLHAMDRYWHTGCLKCSCCQAQL-GELGTSCFTKSGMILCKRDYIR 59
>gi|383853574|ref|XP_003702297.1| PREDICTED: LIM/homeobox protein Lhx5-like [Megachile rotundata]
Length = 485
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GC +PI+D++ L +DR WH+ C++C C L + CFSR ++C++DFFR
Sbjct: 4 SCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDK--CFSREAKLFCREDFFR 58
>gi|328781883|ref|XP_396576.4| PREDICTED: hypothetical protein LOC413125, partial [Apis mellifera]
Length = 417
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 2 LKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SC 59
LK S P ++ C GCG I++R+ LLA+DR WH GCL+C++C L +E+ SC
Sbjct: 178 LKQEGGPSGPTGIQQ--CAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAAL-AEIGHSC 234
Query: 60 FSRHGNIYCKQDFFR 74
++R G I CK D+ R
Sbjct: 235 YTRSGMILCKSDYRR 249
>gi|345497659|ref|XP_001601152.2| PREDICTED: LIM/homeobox protein Lhx5-like [Nasonia vitripennis]
Length = 475
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GC +PI+D+F +DR WH C++C C PL + CFSR ++C+ DFF+
Sbjct: 4 SCAGCDKPIMDKFLFNVLDRAWHADCVRCCDCRNPLQEK--CFSREAKLFCRNDFFK 58
>gi|109019176|ref|XP_001115086.1| PREDICTED: LIM/homeobox protein Lhx4-like isoform 2 [Macaca
mulatta]
Length = 390
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C GC Q I+D+F L +DR WH CL+CA C + L CFSR G++YCK+D
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADR--CFSRAGSVYCKED 80
>gi|405963181|gb|EKC28778.1| LIM domain transcription factor LMO4.1 [Crassostrea gigas]
Length = 165
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+C GCG I DRF L A++R WH CL+C+ C L SCF+R G I CK D+ R
Sbjct: 22 ACAGCGSRISDRFLLHAMERFWHTACLKCSCCQTNLEQLGSCFTRAGMILCKNDYMR 78
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPI-IDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GCGQ I + + +HL C C C++PL +GNI C+ D+ +
Sbjct: 85 SCAGCGQSIPANEMVMRTQGNVYHLKCFNCYTCNMPLSPGDRFGVVNGNIICENDYSK 142
>gi|241999338|ref|XP_002434312.1| lhx4, putative [Ixodes scapularis]
gi|215496071|gb|EEC05712.1| lhx4, putative [Ixodes scapularis]
Length = 79
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 24 QPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
QPI+DRF L ++R WH CL+CA C L ++ CF+R+G++YCK DFF+
Sbjct: 31 QPILDRFILKVLERSWHARCLKCADCQAQLANK--CFARNGHVYCKDDFFK 79
>gi|332025537|gb|EGI65700.1| LIM domain transcription factor LMO4 [Acromyrmex echinatior]
Length = 288
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFRYS 76
C CG I++R+ LLA+DR WH+GCL+C +C+V L SC+++ G I CK D+ R++
Sbjct: 141 CAACGVQIVERWLLLAMDRYWHIGCLKCTYCNVVLGEIGQSCYTKSGMILCKADYRRFT 199
>gi|350396477|ref|XP_003484565.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus impatiens]
Length = 419
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GC +PI+D++ L +DR WH+ C++C C L + CFSR ++C++DFFR
Sbjct: 4 SCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDK--CFSREAKLFCREDFFR 58
>gi|196000228|ref|XP_002109982.1| hypothetical protein TRIADDRAFT_14836 [Trichoplax adhaerens]
gi|190588106|gb|EDV28148.1| hypothetical protein TRIADDRAFT_14836, partial [Trichoplax
adhaerens]
Length = 215
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 19 CGGCGQPIIDRFYL--LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
C GCG+ I+D+ YL D++WH+ CL+C C+ PL + SC+ + GNI+C+ D+F
Sbjct: 1 CAGCGRSIMDQEYLGIQKTDKKWHIQCLRCYDCNEPLDKDQSCYVKQGNIFCRTDYF 57
>gi|443701940|gb|ELU00130.1| hypothetical protein CAPTEDRAFT_97456 [Capitella teleta]
Length = 269
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
++C GCG I DRF++ +D+ WH C+QCA C L SC++R +YCK DFF+
Sbjct: 3 TTCIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLID--SCYTREKKLYCKSDFFK 58
>gi|340710825|ref|XP_003393984.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus terrestris]
Length = 479
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GC +PI+D++ L +DR WH+ C++C C L + CFSR ++C++DFFR
Sbjct: 4 SCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDK--CFSREAKLFCREDFFR 58
>gi|256085687|ref|XP_002579045.1| hypothetical protein [Schistosoma mansoni]
Length = 224
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQ-WHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC QPI ++ YL D Q WH+ CL C C L E SCF+R+G IYC++D+
Sbjct: 168 CTGCNQPIYEKIYLGLSDGQLWHMNCLNCNTCGKCLDKETSCFNRYGQIYCRKDY 222
>gi|312385468|gb|EFR29960.1| hypothetical protein AND_00755 [Anopheles darlingi]
Length = 339
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E +CGGC + I DR+ WH CL+C+ C+ PL + SCF R G++YCK D+ +
Sbjct: 70 EYKACGGCSEQITDRYIFEVNGASWHGSCLRCSVCYCPLERQASCFLRDGDVYCKADYIK 129
>gi|13516919|dbj|BAB40339.1| islet [Halocynthia roretzi]
Length = 432
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GCG PI D++ L +A + +WH GCL+CA C + L +CF R G YCKQD+
Sbjct: 25 CVGCGTPIQDQYMLRVAPNLEWHAGCLKCADCGLHLDESRTCFVRDGKTYCKQDY 79
>gi|156379960|ref|XP_001631723.1| predicted protein [Nematostella vectensis]
gi|156218768|gb|EDO39660.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC PI D+F L +D WH C+QC+ C PL CFSR G ++CK DF+R
Sbjct: 5 CAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTER--CFSREGKLFCKTDFYR 58
>gi|229619776|dbj|BAH58087.1| LIM homeobox protein 1 [Nematostella vectensis]
Length = 358
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC PI D+F L +D WH C+QC+ C PL CFSR G ++CK DF+R
Sbjct: 5 CAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTER--CFSREGKLFCKTDFYR 58
>gi|158296021|ref|XP_316578.4| AGAP006540-PA [Anopheles gambiae str. PEST]
gi|157016312|gb|EAA11207.4| AGAP006540-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P+E SC CG+PI D+F L WH CL+C CH PL + SCF R IYCK D+
Sbjct: 17 PKELRSCTACGEPISDQFLLDVGGCSWHSACLRCCICHTPLDHQPSCFLRERQIYCKTDY 76
Query: 73 FR 74
+
Sbjct: 77 TK 78
>gi|322796242|gb|EFZ18818.1| hypothetical protein SINV_14480 [Solenopsis invicta]
Length = 58
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
SC GC +PI+D++ L +DR WH+ C++C C L + CFSR ++C+ DFFR
Sbjct: 4 SCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRAALQDK--CFSREAKLFCRNDFFR 58
>gi|345492348|ref|XP_001601137.2| PREDICTED: LIM/homeobox protein Awh-like [Nasonia vitripennis]
Length = 300
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
CGGCG+ + +R + R WH CL+C C PLH + SCF R+ IYC+QD+
Sbjct: 91 CGGCGENVHERTVICVGGRTWHSKCLKCCACSKPLHDQHSCFLRNTQIYCRQDYV 145
>gi|17508255|ref|NP_492696.1| Protein LIN-11 [Caenorhabditis elegans]
gi|2506818|sp|P20154.2|LIN11_CAEEL RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage
protein 11
gi|3881427|emb|CAB02310.1| Protein LIN-11 [Caenorhabditis elegans]
Length = 405
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY 75
+ C C QPI+DR+ + + WH CL+C C P+ ++CFSR G I CK DF RY
Sbjct: 66 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPM--SMTCFSRDGLILCKTDFSRRY 123
Query: 76 SQ 77
SQ
Sbjct: 124 SQ 125
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+CA CH+ L + +CF R G YCK+D+ R
Sbjct: 15 SMCVGCGSQIHDQYILRVAPDLEWHASCLKCADCHMYLDEKCTCFVREGKTYCKRDYVR 73
>gi|829167|emb|CAA38240.1| lin-11 protein [Caenorhabditis elegans]
gi|226840|prf||1608206A lin-11 gene
Length = 382
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF-RY 75
+ C C QPI+DR+ + + WH CL+C C P+ ++CFSR G I CK DF RY
Sbjct: 43 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPM--SMTCFSRDGLILCKTDFSRRY 100
Query: 76 SQ 77
SQ
Sbjct: 101 SQ 102
>gi|47221465|emb|CAG08127.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P K+ C CG I DR+ L + WHLGCL+C+ C L SC+ ++ I+CK D+
Sbjct: 13 PPAKNQCASCGMDIQDRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDY 72
Query: 73 F 73
F
Sbjct: 73 F 73
>gi|405973461|gb|EKC38176.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 278
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I +RF L + WH+GCL+C C + L + SCF R NIYC+ D+ R
Sbjct: 45 CYGCGDLITERFLLHVNGQAWHVGCLRCCICQIGLERQTSCFIREDNIYCRNDYSR 100
>gi|353228733|emb|CCD74904.1| putative lim homeobox protein [Schistosoma mansoni]
Length = 628
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQ-WHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC QPI ++ YL D Q WH+ CL C C L E SCF+R+G IYC++D+
Sbjct: 168 CTGCNQPIYEKIYLGLSDGQLWHMNCLNCNTCGKCLDKETSCFNRYGQIYCRKDY 222
>gi|24583264|ref|NP_609359.1| CG5708, isoform A [Drosophila melanogaster]
gi|24583266|ref|NP_723534.1| CG5708, isoform B [Drosophila melanogaster]
gi|22946096|gb|AAF52877.2| CG5708, isoform A [Drosophila melanogaster]
gi|22946097|gb|AAN10724.1| CG5708, isoform B [Drosophila melanogaster]
gi|46409202|gb|AAS93758.1| LD11652p [Drosophila melanogaster]
Length = 241
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH GCL+C HC + +E+ SCF+R G I CK+D+
Sbjct: 78 CGGCGDKISDRYLLYALDRYWHNGCLKC-HCCGAMLAEVGSSCFTRRGLILCKKDY 132
>gi|194761684|ref|XP_001963058.1| GF14129 [Drosophila ananassae]
gi|190616755|gb|EDV32279.1| GF14129 [Drosophila ananassae]
Length = 241
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH GCL+C HC + +E+ SCF+R G I CK+D+
Sbjct: 78 CGGCGDKISDRYLLYALDRYWHNGCLKC-HCCGAMLAEVGSSCFTRRGLILCKKDY 132
>gi|194859624|ref|XP_001969417.1| GG23969 [Drosophila erecta]
gi|190661284|gb|EDV58476.1| GG23969 [Drosophila erecta]
Length = 241
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH GCL+C HC + +E+ SCF+R G I CK+D+
Sbjct: 78 CGGCGDKISDRYLLYALDRYWHNGCLKC-HCCGAMLAEVGSSCFTRRGLILCKKDY 132
>gi|324540769|gb|ADY49599.1| Protein lin-11, partial [Ascaris suum]
Length = 141
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGC I+DR+ +D+ WH C+QCA C PL +CFSR G I C+QDF R
Sbjct: 4 CGGCNTAILDRYVFHVLDKTWHASCIQCADCKEPLTE--TCFSRDGLILCRQDFSRRFGT 61
Query: 79 R 79
R
Sbjct: 62 R 62
>gi|195339689|ref|XP_002036449.1| GM11938 [Drosophila sechellia]
gi|195473535|ref|XP_002089048.1| GE26318 [Drosophila yakuba]
gi|195578073|ref|XP_002078890.1| GD22293 [Drosophila simulans]
gi|194130329|gb|EDW52372.1| GM11938 [Drosophila sechellia]
gi|194175149|gb|EDW88760.1| GE26318 [Drosophila yakuba]
gi|194190899|gb|EDX04475.1| GD22293 [Drosophila simulans]
Length = 241
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH GCL+C HC + +E+ SCF+R G I CK+D+
Sbjct: 78 CGGCGDKISDRYLLYALDRYWHNGCLKC-HCCGAMLAEVGSSCFTRRGLILCKKDY 132
>gi|307188339|gb|EFN73114.1| LIM domain transcription factor LMO4 [Camponotus floridanus]
Length = 230
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDFFR 74
C GCG I++R+ LLA+D+ WH+GCL+C +C V L E+ SC+++ G I CK D+ R
Sbjct: 145 CAGCGVQIVERWLLLAMDQYWHIGCLKCTYCQVVL-GEIGQSCYTKSGMILCKADYRR 201
>gi|125986810|ref|XP_001357168.1| GA19074 [Drosophila pseudoobscura pseudoobscura]
gi|195146774|ref|XP_002014359.1| GL19153 [Drosophila persimilis]
gi|54645497|gb|EAL34236.1| GA19074 [Drosophila pseudoobscura pseudoobscura]
gi|194106312|gb|EDW28355.1| GL19153 [Drosophila persimilis]
Length = 241
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH GCL+C HC + +E+ SCF+R G I CK+D+
Sbjct: 78 CGGCGDKISDRYLLYALDRYWHNGCLKC-HCCGAMLAEVGSSCFTRRGLILCKKDY 132
>gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 24 QPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+PI+DRF L +DR WH+ C+ C C L + CFSR G +YCK DFFR
Sbjct: 2 KPILDRFLLKVLDRPWHVKCVHCCECKCTLSEK--CFSREGKLYCKNDFFR 50
>gi|410921222|ref|XP_003974082.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 324
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
++ C CG+ I+D++ L D WH+ CL C+ CH L S SC+ + ++CK D+FR
Sbjct: 52 RAVCANCGEEIVDKYLLKVNDLCWHVRCLSCSVCHTSLGSHTSCYIKEKEVFCKMDYFR 110
>gi|260447067|ref|NP_001159513.1| ISL LIM homeobox 2 [Xenopus (Silurana) tropicalis]
gi|257043811|gb|ACV33233.1| islet 2 [Xenopus (Silurana) tropicalis]
Length = 333
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQ 77
C GCG I+D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSHILDQYILRVSPDLEWHAACLKCAECSQYLDENCTCFVRDGKTYCKRDYIRLFS 86
Query: 78 ARYP 81
AR P
Sbjct: 87 ARCP 90
>gi|341898967|gb|EGT54902.1| CBN-LIM-6 protein [Caenorhabditis brenneri]
Length = 316
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 6 DDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGN 65
D S++ E C GC I DR+ +D +H CL+C+ C +PL S CFSRHGN
Sbjct: 29 DISAASSTNEDKLCSGCSCLIKDRYIYRVMDESYHEPCLRCSICQLPLSSLKKCFSRHGN 88
Query: 66 IYCKQ 70
IYC+Q
Sbjct: 89 IYCEQ 93
>gi|170034024|ref|XP_001844875.1| arrowhead [Culex quinquefasciatus]
gi|167875283|gb|EDS38666.1| arrowhead [Culex quinquefasciatus]
Length = 257
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E SCGGC + I DR+ WH CL+C+ C+ PL ++SC+ + G +YCK D+ +
Sbjct: 4 EFKSCGGCSEQITDRYIFEVSGCAWHGACLRCSVCYCPLERQVSCYFKDGEVYCKTDYIK 63
Query: 75 YSQA 78
+A
Sbjct: 64 KYKA 67
>gi|158296017|ref|XP_001237835.2| AGAP006537-PA [Anopheles gambiae str. PEST]
gi|157016310|gb|EAU76621.2| AGAP006537-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E +CG C +PI DR+ WH CL+C C PL ++SC+ R G++YCK D+ +
Sbjct: 4 EFKTCGSCAEPITDRYIFEVNGSAWHGSCLRCTVCFCPLERQVSCYLRDGDMYCKSDYIK 63
>gi|410923575|ref|XP_003975257.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 310
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P K+ C CG I DR+ L + WHLGCL+C+ C L SC+ ++ I+CK D+
Sbjct: 26 PPAKNQCASCGMEIQDRYLLKVNNLNWHLGCLECSVCRASLRQHNSCYVKNKEIFCKLDY 85
Query: 73 F 73
F
Sbjct: 86 F 86
>gi|410903283|ref|XP_003965123.1| PREDICTED: LIM domain transcription factor LMO4-B-like [Takifugu
rubripes]
Length = 233
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
SC GCG I DRF L +++R WH CL+C+ CH L SC+SR G I CK D+ R
Sbjct: 22 SCAGCGGRITDRFLLFSMERYWHTRCLRCSCCHAELGEFSRSCYSRGGMILCKDDYIR 79
>gi|307213403|gb|EFN88839.1| LIM domain transcription factor LMO4-B [Harpegnathos saltator]
Length = 249
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDFFRYS 76
C GCG I++R+ LLA+DR WH CL+C++C L +E+ SC++R G + CK D+ R
Sbjct: 142 CAGCGLQIVERWLLLAMDRYWHNACLKCSYCGTAL-AEIGQSCYTRSGMVLCKSDYRRQI 200
Query: 77 QARYPDLPIPKTLVSFLYDKQG 98
Q+ LP + L + L +
Sbjct: 201 QSEL--LPEQRVLRAILMKHKA 220
>gi|291240697|ref|XP_002740254.1| PREDICTED: LIM class homeodomain transcription factor, Lhx6/8
subclass-like [Saccoglossus kowalevskii]
Length = 283
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC PI DR+ L R WH+ CL+C C L + SCF++ NIYCK D+ R
Sbjct: 22 CLGCTSPIQDRYLLKVGTRSWHVRCLRCCICQTGLGGQQSCFTKDDNIYCKMDYIR 77
>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
Length = 450
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSR-HGNIYCKQDFFR 74
CGGC + I+DR+ L +DR WH GCL C C V L + C++R +G+++CK DFF+
Sbjct: 55 CGGCQEAILDRYVLRVMDRCWHAGCLTCRDCGVRLTDK--CYARNNGHVFCKDDFFK 109
>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
Length = 507
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC QPI DRF L +++ WH CL+C C L + CFSR +YCK DF++
Sbjct: 126 CAGCDQPITDRFILKVMEKNWHSACLKCHDCLAQLTDK--CFSRGDFVYCKDDFYK 179
>gi|195403013|ref|XP_002060090.1| GJ14918 [Drosophila virilis]
gi|194149412|gb|EDW65107.1| GJ14918 [Drosophila virilis]
Length = 240
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH GCL+C HC + +++ SCF+R G I CK+D+
Sbjct: 77 CGGCGDKISDRYLLYALDRYWHNGCLKC-HCCGAMLADVGASCFTRRGLILCKKDY 131
>gi|357605400|gb|EHJ64588.1| hypothetical protein KGM_21596 [Danaus plexippus]
Length = 406
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%)
Query: 4 DRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRH 63
D + S E +C CG+PI DRF L WH GCL+C C V L SCF R
Sbjct: 123 DVSEEFSTSGTEHRTCCACGEPIADRFLLEVGGGAWHTGCLRCCVCAVQLDRHPSCFLRD 182
Query: 64 GNIYCKQDFFR 74
+YCKQD+ +
Sbjct: 183 RQVYCKQDYAK 193
>gi|346223350|dbj|BAK78926.1| arrowhead PB [Bombyx mori]
Length = 105
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 35/65 (53%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E +C CG+PI DRF L WH GCL+C C V L SCF R +YCKQD+
Sbjct: 4 EHRTCCACGEPIADRFLLEVGGAAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDYAN 63
Query: 75 YSQAR 79
Q R
Sbjct: 64 DVQGR 68
>gi|195050615|ref|XP_001992931.1| GH13372 [Drosophila grimshawi]
gi|193899990|gb|EDV98856.1| GH13372 [Drosophila grimshawi]
Length = 241
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH GCL+C HC + +++ SCF+R G I CK+D+
Sbjct: 77 CGGCGDKISDRYLLYALDRYWHNGCLKC-HCCGAMLADVGSSCFTRRGLILCKKDY 131
>gi|26355550|dbj|BAC41175.1| unnamed protein product [Mus musculus]
Length = 175
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+FR
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYFRS 155
Query: 76 SQA 78
+ A
Sbjct: 156 APA 158
>gi|261490776|ref|NP_001159787.1| LIM/homeobox protein Lhx8 [Sus scrofa]
gi|238683613|gb|ACR54090.1| LIM homeobox 8 [Sus scrofa]
Length = 295
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
S S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+
Sbjct: 3 SGSVCPAGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIF 62
Query: 68 CKQDFFRYSQAR 79
CK D+FR R
Sbjct: 63 CKLDYFRRYGTR 74
>gi|427795151|gb|JAA63027.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 182
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
C GCG I+DR+ L A+DR WH GCL+C+ C L SCF++ G I C+ D+ R
Sbjct: 42 CAGCGAKILDRYLLHALDRYWHNGCLKCSCCQATLADIGASCFAKAGMILCRNDYIR 98
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPI-IDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+C GCGQ I + + + A +H+ C C CH L +GN+ C+QD +
Sbjct: 104 GACSGCGQMIPANDYVMRAAQNVYHVKCFACVKCHSQLVPGDRYNLVNGNVLCEQDCLK 162
>gi|379698940|ref|NP_001243941.1| arrowhead PA [Bombyx mori]
gi|346223348|dbj|BAK78925.1| arrowhead PA [Bombyx mori]
Length = 274
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
E +C CG+PI DRF L WH GCL+C C V L SCF R +YCKQD+ +
Sbjct: 4 EHRTCCACGEPIADRFLLEVGGAAWHTGCLRCCVCAVQLDRHPSCFLRDRQVYCKQDYAK 63
>gi|328715997|ref|XP_001946565.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 407
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + +SC GCG I+DRF + WH C+ C+ C VPL SC+ RH +YCK D
Sbjct: 26 CGDGPASCEGCGTKIVDRFLMRVGTSSWHEQCVTCSACGVPLAK--SCYYRHNGLYCKND 83
Query: 72 FFR 74
+ R
Sbjct: 84 YDR 86
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 19 CGGCGQPIIDRFYLLAV--DRQWHLGCLQCAHCHVPLHS--ELSCFSRHGNIYCKQDF 72
CG CG+P+ R ++ +H+GC C C PL + + G ++C+ DF
Sbjct: 92 CGRCGEPLGARELVMRAGPSHVYHVGCFACVACMQPLQKGQQYVVKAGGGQLFCRTDF 149
>gi|340376253|ref|XP_003386648.1| PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedon
queenslandica]
Length = 338
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC I DRF L D+ WH CL+C+ C L + C+SR G +YCK DF +
Sbjct: 93 CAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDK--CYSRSGQVYCKDDFSKRFGT 150
Query: 79 RYP--DLPIPKTLV 90
R PIP T V
Sbjct: 151 RCAGCQQPIPPTQV 164
>gi|297294254|ref|XP_001094225.2| PREDICTED: insulin gene enhancer protein ISL-1-like [Macaca
mulatta]
Length = 286
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ RY
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRY 74
>gi|209489466|gb|ACI49225.1| hypothetical protein Csp3_JD05.010 [Caenorhabditis angaria]
Length = 344
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C C +PI+DR+ + + WH CL+C+ C P+ ++CFSR G I CK DF R
Sbjct: 2 SECAACARPILDRYVFTVLGKCWHQECLRCSDCAAPM--TMTCFSRDGLILCKNDFSR 57
>gi|167859587|gb|ACA04748.1| Lim3 [Amphimedon queenslandica]
Length = 338
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC I DRF L D+ WH CL+C+ C L + C+SR G +YCK DF +
Sbjct: 93 CAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDK--CYSRSGQVYCKDDFSKRFGT 150
Query: 79 RYP--DLPIPKTLV 90
R PIP T V
Sbjct: 151 RCAGCQQPIPPTQV 164
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C CG+ I DRF + R WH CL+C+ C L ++ SCF R G IYC+ D+ R
Sbjct: 1 CAACGELITDRFLIQVSGRTWHSTCLRCSVCRTALDNQPSCFVRAGAIYCRADYTR 56
>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
Length = 278
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC I+DRF L +DR WH CL+C C L + CF R G+ YCK+DFFR
Sbjct: 41 CAGCSGFILDRFILKVLDRPWHTECLKCMDCGTHLVDK--CFVRGGSTYCKEDFFR 94
>gi|194749355|ref|XP_001957104.1| GF24228 [Drosophila ananassae]
gi|190624386|gb|EDV39910.1| GF24228 [Drosophila ananassae]
Length = 275
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|24656997|ref|NP_523907.2| arrowhead, isoform A [Drosophila melanogaster]
gi|23092945|gb|AAF47800.2| arrowhead, isoform A [Drosophila melanogaster]
Length = 214
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|17945534|gb|AAL48819.1| RE24382p [Drosophila melanogaster]
Length = 275
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|345802215|ref|XP_547330.3| PREDICTED: LIM/homeobox protein Lhx8 [Canis lupus familiaris]
Length = 462
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG+ I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 182 SACPPGKCVCNSCGREIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 241
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 242 LDYFRRYGTR 251
>gi|195161060|ref|XP_002021388.1| GL25299 [Drosophila persimilis]
gi|198465223|ref|XP_001353549.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
gi|194118501|gb|EDW40544.1| GL25299 [Drosophila persimilis]
gi|198150064|gb|EAL31062.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
Length = 275
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|195337236|ref|XP_002035235.1| GM14592 [Drosophila sechellia]
gi|194128328|gb|EDW50371.1| GM14592 [Drosophila sechellia]
Length = 275
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|442630036|ref|NP_001261379.1| arrowhead, isoform C [Drosophila melanogaster]
gi|440215263|gb|AGB94074.1| arrowhead, isoform C [Drosophila melanogaster]
Length = 287
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|442630038|ref|NP_001261380.1| arrowhead, isoform D [Drosophila melanogaster]
gi|440215264|gb|AGB94075.1| arrowhead, isoform D [Drosophila melanogaster]
Length = 271
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|2435404|gb|AAB71337.1| arrowhead [Drosophila melanogaster]
Length = 214
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|195587560|ref|XP_002083529.1| GD13784 [Drosophila simulans]
gi|194195538|gb|EDX09114.1| GD13784 [Drosophila simulans]
Length = 278
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|24656992|ref|NP_728906.1| arrowhead, isoform B [Drosophila melanogaster]
gi|194866170|ref|XP_001971791.1| GG15164 [Drosophila erecta]
gi|195491511|ref|XP_002093592.1| GE21383 [Drosophila yakuba]
gi|62510367|sp|Q8IRC7.1|AWH_DROME RecName: Full=LIM/homeobox protein Awh; AltName: Full=Protein
arrowhead
gi|23092944|gb|AAN11572.1| arrowhead, isoform B [Drosophila melanogaster]
gi|94400621|gb|ABF17921.1| FI01007p [Drosophila melanogaster]
gi|190653574|gb|EDV50817.1| GG15164 [Drosophila erecta]
gi|194179693|gb|EDW93304.1| GE21383 [Drosophila yakuba]
Length = 275
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SCF R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>gi|410904301|ref|XP_003965630.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 373
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K++C CGQ I+DR+ L + WH+ CL+C+ C L SC+ ++ I+CK D+F
Sbjct: 92 KNTCASCGQEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYF 149
>gi|157137277|ref|XP_001663968.1| arrowhead [Aedes aegypti]
gi|108869746|gb|EAT33971.1| AAEL013763-PA, partial [Aedes aegypti]
Length = 211
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 11 PCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQ 70
P E SCGGC + I DR+ WH CL+C+ C+ L ++SC+ + G +YCK
Sbjct: 5 PLQTEFKSCGGCAEQITDRYIFEVSGCAWHGSCLRCSICYCSLERQVSCYFKDGEVYCKT 64
Query: 71 DFFRYSQA 78
D+ + +A
Sbjct: 65 DYIKKFKA 72
>gi|403257739|ref|XP_003921454.1| PREDICTED: LIM/homeobox protein Lhx8 [Saimiri boliviensis
boliviensis]
Length = 346
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
S S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+
Sbjct: 54 SGSGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIF 113
Query: 68 CKQDFFRYSQAR 79
CK D+FR R
Sbjct: 114 CKLDYFRRYGTR 125
>gi|196013287|ref|XP_002116505.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
gi|190581096|gb|EDV21175.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
Length = 265
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 12 CPEEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQ 70
CP++ C GCG I DR+ L +A D Q+H CL+CA C L + +CF R+G YCK
Sbjct: 10 CPDQLPFCSGCGGKINDRYILQVAPDMQYHAACLKCASCQQLLDEKETCFLRNGKPYCKS 69
Query: 71 DF 72
DF
Sbjct: 70 DF 71
>gi|47207847|emb|CAF94375.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P KS C CGQ I+DR+ L D WH+ CL C C L +SC+ + ++CK D+
Sbjct: 53 PPIKSVCTSCGQDIVDRYLLKVNDLCWHVRCLSCTVCKTSLGRHVSCYIKEKQVFCKLDY 112
Query: 73 FRYSQAR 79
FR R
Sbjct: 113 FRRYGTR 119
>gi|312371800|gb|EFR19896.1| hypothetical protein AND_21634 [Anopheles darlingi]
Length = 295
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
+E SC CG+PI D+F L WH CL+C CH PL + SC+ R IYCK D+
Sbjct: 235 KELRSCTACGEPISDKFLLDVGGCSWHSACLRCCICHTPLDQQPSCYVRDRQIYCKTDYA 294
Query: 74 R 74
+
Sbjct: 295 K 295
>gi|332029130|gb|EGI69141.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 292
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
CGGCG+ + +R L R WH CL+C+ C PLH + SCF R +YC+ D+ R A
Sbjct: 3 CGGCGERVRERTILCVGGRTWHSRCLRCSACARPLHDQHSCFQRGMRVYCRHDYDRTFGA 62
Query: 79 R 79
+
Sbjct: 63 K 63
>gi|327277087|ref|XP_003223297.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Anolis
carolinensis]
Length = 381
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
+ C GC PI DRF L +R WH GC++CA C PL +C+ R+ +YCK D+ +
Sbjct: 38 REVCAGCNTPISDRFLLRVNERSWHEGCVKCAACLQPLSG--TCYCRNRQLYCKHDYEKL 95
Query: 76 SQAR 79
Q +
Sbjct: 96 FQTK 99
>gi|51571947|ref|NP_001003980.1| LIM/homeobox protein Lhx8 [Danio rerio]
gi|50953779|gb|AAT90496.1| Lhx7 [Danio rerio]
gi|108742021|gb|AAI17602.1| LIM homeobox 8 [Danio rerio]
Length = 332
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
EK+ C CG I+D++ L D WH+ CL C+ C L +SC+ + I+CK D+FR
Sbjct: 47 EKAICTSCGTEIVDKYLLKVNDMCWHVRCLSCSVCQTSLGRHISCYIKEKEIFCKLDYFR 106
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++CK DFF+
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCKDDFFK 144
>gi|213514790|ref|NP_001133458.1| LIM domain transcription factor LMO4.1 [Salmo salar]
gi|209154084|gb|ACI33274.1| LIM domain transcription factor LMO4.1 [Salmo salar]
Length = 168
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
SC GCG I DRF L +++R WH CL+C+ CH L +C+S+ G I CK D+ R
Sbjct: 24 SCAGCGGRIADRFLLFSMERYWHTRCLKCSCCHAQLGEIGTTCYSKGGMILCKNDYIR 81
>gi|321473071|gb|EFX84039.1| hypothetical protein DAPPUDRAFT_24627 [Daphnia pulex]
Length = 225
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GCG I DR+ + D WH CL C CH PL SCF+R G +YC+QD+ R A
Sbjct: 2 CEGCGLGIADRYVMRVADGSWHEDCLVCCICHAPLVH--SCFTRSGRVYCRQDYDRVYGA 59
Query: 79 R 79
+
Sbjct: 60 K 60
>gi|260793702|ref|XP_002591850.1| hypothetical protein BRAFLDRAFT_125337 [Branchiostoma floridae]
gi|229277061|gb|EEN47861.1| hypothetical protein BRAFLDRAFT_125337 [Branchiostoma floridae]
Length = 329
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
C GCG I DRF L A+DR WH+ CL+C+ C L SCFS+ G I CK D+ R
Sbjct: 65 CAGCGGKIGDRFLLHALDRYWHVACLKCSCCQAQLGDIGSSCFSKAGMILCKTDYIR 121
>gi|348505324|ref|XP_003440211.1| PREDICTED: LIM domain transcription factor LMO4.1-like
[Oreochromis niloticus]
Length = 198
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELS-CFSRHGNIYCKQDFFR 74
SC GCG I DRF L +++R WH CL+C+ CH L S C+S+ G I CK D+ R
Sbjct: 24 SCAGCGGRIADRFLLFSMERYWHTRCLKCSCCHAQLGEYSSTCYSKGGMILCKNDYIR 81
>gi|443694942|gb|ELT95960.1| hypothetical protein CAPTEDRAFT_39289, partial [Capitella teleta]
Length = 118
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYS 76
S+C GCGQ I DRF L A R WH CL C C V L S SCF++ G + CK D+ R
Sbjct: 1 SACFGCGQAIADRFLLKAAGRSWHEECLSCNACGVQLTS--SCFAKDGRLLCKADYARLY 58
Query: 77 QAR 79
R
Sbjct: 59 SVR 61
>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
Length = 433
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+CA CH L +CF R G YCK+D+ R
Sbjct: 9 SLCVGCGAQIHDQYILRVAPDLEWHAACLKCAECHQFLDENCTCFVRDGKTYCKRDYVR 67
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++CK DFF+
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCKDDFFK 144
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I DR+ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDRYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++CK DFF+
Sbjct: 93 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCKDDFFK 146
>gi|29469078|ref|NP_817093.1| LIM domain only 4a [Danio rerio]
gi|19879278|gb|AAK26166.1| LIM only 4 protein [Danio rerio]
gi|28277424|gb|AAH45835.1| LIM domain only 4 [Danio rerio]
gi|182890324|gb|AAI64026.1| Lmo4 protein [Danio rerio]
Length = 167
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 1 MLKDRDDSSSPCPEEKS-----SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS 55
M+ R +SS+ S SC GCG I DRF L ++DR WH CL+C+ C L
Sbjct: 1 MVNSRVESSAVAVTGGSGGAVRSCAGCGGRISDRFLLFSMDRYWHTRCLKCSCCQAQLGE 60
Query: 56 ELS-CFSRHGNIYCKQDFFR 74
S CFS+ G I C+ D+ R
Sbjct: 61 IGSTCFSKGGMILCRNDYIR 80
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++CK DFF+
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCKDDFFK 144
>gi|443683990|gb|ELT88059.1| hypothetical protein CAPTEDRAFT_51440, partial [Capitella teleta]
Length = 54
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I DRF++ +D+ WH C+QCA C L SC++R +YCK DFF+
Sbjct: 1 CIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLID--SCYTREKKLYCKSDFFK 54
>gi|403182403|gb|EAT47695.2| AAEL001207-PA [Aedes aegypti]
Length = 702
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
CGGCG I +RF+L A+DR WH CL+C+ C L SC++R G I CK D+ R
Sbjct: 77 CGGCGGKITERFFLHALDRYWHNSCLKCSCCGAMLADIGSSCYTRSGMILCKADYSR 133
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+S C GC +PI DRF + D WH CLQCA C PL + SC+ R +YCK D+
Sbjct: 53 RSVCEGCQRPISDRFLMRVNDSSWHEECLQCAVCQQPLTT--SCYLRERKLYCKHDY 107
>gi|431897001|gb|ELK06265.1| LIM/homeobox protein Lhx8 [Pteropus alecto]
Length = 306
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 87 SVCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 146
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 147 LDYFRRYGTR 156
>gi|291398678|ref|XP_002715959.1| PREDICTED: LIM homeobox 8 [Oryctolagus cuniculus]
Length = 371
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 87 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 146
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 147 LDYFRRYGTR 156
>gi|301763072|ref|XP_002916962.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx8-like
[Ailuropoda melanoleuca]
Length = 574
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 294 SVCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 353
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 354 LDYFRRYGTR 363
>gi|405971990|gb|EKC36789.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 319
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
+ +C GCG PI D++ D WH CLQCA C + L +C+S++G++YCK D+ +
Sbjct: 12 EETCAGCGYPIRDKYLFKINDNVWHENCLQCAICRLSLSG--TCYSKNGHLYCKSDYDKL 69
Query: 76 SQAR 79
+ R
Sbjct: 70 FRGR 73
>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
Length = 421
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++C++DFF+
Sbjct: 88 CGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCREDFFK 141
>gi|444727546|gb|ELW68032.1| LIM/homeobox protein Lhx8 [Tupaia chinensis]
Length = 348
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 58 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 117
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 118 LDYFRRYGTR 127
>gi|440907910|gb|ELR57994.1| LIM/homeobox protein Lhx8 [Bos grunniens mutus]
Length = 375
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 85 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 144
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 145 LDYFRRYGTR 154
>gi|281354377|gb|EFB29961.1| hypothetical protein PANDA_005098 [Ailuropoda melanoleuca]
Length = 351
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 61 SVCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 120
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 121 LDYFRRYGTR 130
>gi|225708480|gb|ACO10086.1| LIM domain transcription factor LMO4 [Osmerus mordax]
Length = 159
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 7 DSSSPCPEEK-SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHG 64
+S +PC SC GCG I DRF L +++R WH CL+C+ CH L SC+S+ G
Sbjct: 3 NSQAPCGGASPRSCAGCGGKIGDRFLLYSMERYWHTRCLKCSCCHAQLGDIGTSCYSKGG 62
Query: 65 NIYCKQDFFR 74
I C+ D+ R
Sbjct: 63 MILCRSDYIR 72
>gi|368711326|ref|NP_001243043.1| LIM/homeobox protein Lhx8 isoform 2 [Homo sapiens]
gi|395730366|ref|XP_003775714.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pongo abelii]
gi|410033125|ref|XP_003949492.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pan troglodytes]
gi|426330050|ref|XP_004026039.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Gorilla gorilla
gorilla]
gi|441637563|ref|XP_004090066.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Nomascus
leucogenys]
Length = 346
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|402854983|ref|XP_003892129.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Papio anubis]
Length = 346
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
Length = 467
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++CK DFF+
Sbjct: 87 CGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCKDDFFK 140
>gi|395821904|ref|XP_003784270.1| PREDICTED: LIM/homeobox protein Lhx8 [Otolemur garnettii]
Length = 346
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|410967547|ref|XP_003990280.1| PREDICTED: LIM/homeobox protein Lhx8 [Felis catus]
Length = 346
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SVCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|297278964|ref|XP_001097664.2| PREDICTED: LIM/homeobox protein Lhx8-like [Macaca mulatta]
gi|402854981|ref|XP_003892128.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Papio anubis]
Length = 356
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 66 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 125
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 126 LDYFRRYGTR 135
>gi|50083287|ref|NP_001001933.1| LIM/homeobox protein Lhx8 isoform 1 [Homo sapiens]
gi|114557210|ref|XP_524738.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pan troglodytes]
gi|297664648|ref|XP_002810744.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pongo abelii]
gi|397521070|ref|XP_003830626.1| PREDICTED: LIM/homeobox protein Lhx8 [Pan paniscus]
gi|426330048|ref|XP_004026038.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Gorilla gorilla
gorilla]
gi|296434566|sp|Q68G74.2|LHX8_HUMAN RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8
Length = 356
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 66 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 125
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 126 LDYFRRYGTR 135
>gi|355745377|gb|EHH50002.1| hypothetical protein EGM_00758, partial [Macaca fascicularis]
Length = 320
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 30 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 89
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 90 LDYFRRYGTR 99
>gi|51494804|gb|AAH40321.1| LIM homeobox 8 [Homo sapiens]
gi|312150920|gb|ADQ31972.1| LIM homeobox 8 [synthetic construct]
Length = 356
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 66 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 125
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 126 LDYFRRYGTR 135
>gi|390466088|ref|XP_002751019.2| PREDICTED: LIM/homeobox protein Lhx8 [Callithrix jacchus]
Length = 346
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|332222205|ref|XP_003260257.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Nomascus
leucogenys]
Length = 356
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 66 SGCPPGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 125
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 126 LDYFRRYGTR 135
>gi|149026292|gb|EDL82535.1| rCG29002 [Rattus norvegicus]
Length = 367
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 87 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 146
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 147 LDYFRRYGTR 156
>gi|358411510|ref|XP_589896.5| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
Length = 443
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 163 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 222
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 223 LDYFRRYGTR 232
>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
Length = 392
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++CK DFF+
Sbjct: 6 CGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCKDDFFK 59
>gi|195441498|ref|XP_002068546.1| GK20529 [Drosophila willistoni]
gi|194164631|gb|EDW79532.1| GK20529 [Drosophila willistoni]
Length = 275
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E SC CG+PI DRF+L WH CL+C C PL + SC+ R +YCK D+
Sbjct: 4 ELRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCYIRERQVYCKADY 61
>gi|74213688|dbj|BAE35644.1| unnamed protein product [Mus musculus]
Length = 367
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 87 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 146
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 147 LDYFRRYGTR 156
>gi|113195680|ref|NP_034843.2| LIM/homeobox protein Lhx8 [Mus musculus]
gi|341941136|sp|O35652.4|LHX8_MOUSE RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8; AltName: Full=L3; AltName: Full=LIM/homeobox protein
Lhx7; Short=LIM homeobox protein 7
gi|3172042|dbj|BAA28628.1| LIM-homeodomain protein [Mus musculus]
gi|74227158|dbj|BAE38359.1| unnamed protein product [Mus musculus]
gi|116138618|gb|AAI25284.1| LIM homeobox protein 8 [Mus musculus]
gi|116138795|gb|AAI25282.1| LIM homeobox protein 8 [Mus musculus]
gi|148679947|gb|EDL11894.1| LIM homeobox protein 8, isoform CRA_b [Mus musculus]
gi|219519204|gb|AAI44769.1| LIM homeobox protein 8 [Mus musculus]
gi|1587483|prf||2206477A LIM homeo domain transcription factor
Length = 367
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 87 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 146
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 147 LDYFRRYGTR 156
>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
Length = 467
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CGGC + I+D++ L ++R WH CL C C L + CF+R+G+++CK DFF+
Sbjct: 87 CGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDK--CFARNGHVFCKDDFFK 140
>gi|297473064|ref|XP_002686347.1| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
gi|296489244|tpg|DAA31357.1| TPA: LIM domain family member (lim-4)-like [Bos taurus]
Length = 346
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi]
Length = 472
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC Q I DRF L D+ WH CL+C C L + CFSR +YCK+DFF+
Sbjct: 78 CTGCAQHIFDRFILKVQDKPWHAQCLKCGDCGRQLTDK--CFSRGSFVYCKEDFFK 131
>gi|258645165|ref|NP_001158279.1| tailup [Tribolium castaneum]
Length = 431
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 7 DSSSPCPEEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGN 65
DS + P S C GCG I D++ L +A D +WH CL+C C L +CF R G
Sbjct: 38 DSQNKKPRRLSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGK 97
Query: 66 IYCKQDFFRYSQAR 79
YCK+D+ R A+
Sbjct: 98 TYCKRDYVRLFGAK 111
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 17 SSCGGCGQPII-DRFYLLAVDRQWHLGCLQCAHCHVPL-HSELSCFSRHGNIYCKQDFFR 74
+ C CG D F + A + +H+ C +C C PL + GN+YCK+D
Sbjct: 110 AKCDRCGSSFSKDDFVMRAKSKIYHIKCFKCCACSRPLVPGDEFALRDGGNLYCKEDHDH 169
Query: 75 YSQARYPDLP-IPKT 88
+ P P +P T
Sbjct: 170 MEKTSIPTTPHLPST 184
>gi|2285798|dbj|BAA21649.1| LIM-homeodomain protein [Mus musculus]
Length = 426
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 146 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 205
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 206 LDYFRRYGTR 215
>gi|242007294|ref|XP_002424476.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
gi|212507894|gb|EEB11738.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
Length = 389
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
++ C + C GCGQ I DR+ + D WH CL C C V L SC++R G +Y
Sbjct: 18 TNGKCEKTYEMCEGCGQKIHDRYLMRVGDTSWHEHCLSCNVCGVLLSH--SCYTRSGKLY 75
Query: 68 CKQDF---FRYSQARYPDLPIPKTLV 90
CKQD+ F +R D +P LV
Sbjct: 76 CKQDYDRIFGVKCSRCGDRILPHELV 101
>gi|47215186|emb|CAG01452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
++ C C + I+D++ L D WH+ CL C+ CH L S SC+ + ++CK D+FR
Sbjct: 9 RAVCASCSEEIVDKYLLKVNDLCWHVRCLSCSVCHTSLSSHTSCYIKEKEVFCKLDYFR 67
>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Acyrthosiphon pisum]
Length = 487
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+CA CH L +CF R G YCK D+ R
Sbjct: 74 SLCVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDYVR 132
>gi|195119225|ref|XP_002004132.1| GI18740 [Drosophila mojavensis]
gi|193914707|gb|EDW13574.1| GI18740 [Drosophila mojavensis]
Length = 238
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDF 72
CGGCG I DR+ L A+DR WH CL+C HC + +++ SCF+R G I CK+D+
Sbjct: 77 CGGCGDKISDRYLLYALDRYWHNSCLKC-HCCGAMLADVGSSCFTRRGLILCKKDY 131
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG PI D++ L +A + +WH GCL+CA C L +CF R G YCK+D+ R
Sbjct: 19 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDYTR 75
>gi|426218775|ref|XP_004003612.1| PREDICTED: LIM/homeobox protein Lhx8 [Ovis aries]
Length = 442
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 152 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 211
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 212 LDYFRRYGTR 221
>gi|58866006|ref|NP_001012219.1| LIM/homeobox protein Lhx8 [Rattus norvegicus]
gi|58476609|gb|AAH90011.1| LIM homeobox 8 [Rattus norvegicus]
Length = 336
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SVCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG PI D++ L +A + +WH GCL+CA C L +CF R G YCK+D+ R
Sbjct: 40 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDYTR 96
>gi|170034020|ref|XP_001844873.1| arrowhead [Culex quinquefasciatus]
gi|167875281|gb|EDS38664.1| arrowhead [Culex quinquefasciatus]
Length = 304
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+E SC CG+PI D++ L WH CL+C CH PL + SCF R IYCK D+
Sbjct: 5 KELRSCTACGEPISDQYLLDVGGCSWHSACLRCCICHTPLDQQPSCFLRDRQIYCKADY 63
>gi|449268911|gb|EMC79740.1| LIM homeobox transcription factor 1-alpha [Columba livia]
Length = 343
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
+ C GC PI DRF L +R WH GC++CA C PL +C+ R+ +YCK D+ +
Sbjct: 2 REVCAGCDTPISDRFLLRVNERSWHEGCVKCAVCLQPLAG--TCYCRNRQLYCKHDYEKL 59
Query: 76 SQAR 79
Q +
Sbjct: 60 FQTK 63
>gi|47223723|emb|CAF99332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CGQ I+DR+ L + WH+ CL+C+ C L SC+ ++ I+CK D+F
Sbjct: 43 KNVCASCGQEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYF 100
>gi|62859667|ref|NP_001016720.1| ISL LIM homeobox 1 [Xenopus (Silurana) tropicalis]
Length = 135
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 13 PEEK---SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYC 68
P++K S C GCG I D++ L ++ D +WH CL+CA C L +CF R G YC
Sbjct: 8 PKKKRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYC 67
Query: 69 KQDFFRYSQA 78
K+D+ RYS
Sbjct: 68 KRDYIRYSNG 77
>gi|348586764|ref|XP_003479138.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cavia porcellus]
Length = 485
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 206 SGCPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 265
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 266 LDYFRRYGTR 275
>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Acyrthosiphon pisum]
Length = 513
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+CA CH L +CF R G YCK D+ R
Sbjct: 100 SLCVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDYVR 158
>gi|348535208|ref|XP_003455093.1| PREDICTED: LIM domain transcription factor LMO4-B-like
[Oreochromis niloticus]
Length = 261
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQD 71
P + SC GCG I DRF L +++R WH CL+C+ C L +C+S+ G I C+ D
Sbjct: 10 PSDPRSCAGCGGKIADRFLLFSMERYWHTRCLKCSCCQAQLGDIGTTCYSKGGMILCRSD 69
Query: 72 FFR 74
+ R
Sbjct: 70 YIR 72
>gi|268567057|ref|XP_002639879.1| C. briggsae CBR-LIN-11 protein [Caenorhabditis briggsae]
Length = 411
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C C QPI+DR+ + + WH CL+C C P+ ++CFS+ G I CK D+ R
Sbjct: 73 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMS--MTCFSKDGLILCKTDYSR 128
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
S C GC PI D+F L +A + +WH CL+C C+ L +CF R G YCK+DF R+
Sbjct: 9 SVCAGCRCPITDQFILRVAPNLEWHASCLKCDDCNKFLDENCTCFIREGKPYCKKDFVRF 68
>gi|62859451|ref|NP_001015899.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
gi|89268071|emb|CAJ83129.1| LIM homeobox 7/8 [Xenopus (Silurana) tropicalis]
gi|110645724|gb|AAI18740.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
Length = 374
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
KS C CG I+D++ L D WH+ CL C+ C L SC+ + +IYCK D+FR
Sbjct: 90 KSVCSNCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIYCKLDYFR 148
>gi|241688853|ref|XP_002411721.1| LIM domain containing protein [Ixodes scapularis]
gi|215504541|gb|EEC14035.1| LIM domain containing protein [Ixodes scapularis]
Length = 173
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 16 KSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C GCG PI D++ L +A D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 24 RRVCVGCGAPIRDQYILRVAPDLEWHAACLKCADCQQFLDETCTCFVRDGKTYCKRDYVR 83
Query: 75 YSQAR 79
A+
Sbjct: 84 LFGAK 88
>gi|157134682|ref|XP_001663345.1| arrowhead [Aedes aegypti]
gi|108870378|gb|EAT34603.1| AAEL013168-PA, partial [Aedes aegypti]
Length = 306
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
+E SC CG+PI D++ L WH CL+C CH PL + SCF R IYCK D+
Sbjct: 3 KELRSCTACGEPISDKYLLDVGGCSWHSACLRCCICHNPLDHQPSCFLRDRQIYCKNDYT 62
Query: 74 RYSQAR 79
+ A+
Sbjct: 63 KTFGAK 68
>gi|68448499|ref|NP_001020339.1| LIM homeobox transcription factor 1, beta a [Danio rerio]
gi|62461839|gb|AAX83056.1| LIM homeodomain protein [Danio rerio]
gi|190337362|gb|AAI63321.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
gi|190339774|gb|AAI63333.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
Length = 373
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C +S C GC +PI DRF L D WH CLQC+ C L +SC+SR +YCK D
Sbjct: 24 CAHHQSVCEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLL--TMSCYSRDHKLYCKHD 81
Query: 72 F 72
+
Sbjct: 82 Y 82
>gi|48375213|gb|AAT42259.1| LIM homeodomain protein Lmx1b.2 [Danio rerio]
Length = 375
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C +S C GC +PI DRF L D WH CLQC+ C L +SC+SR +YCK D
Sbjct: 26 CAHHQSVCEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLL--TMSCYSRDHKLYCKHD 83
Query: 72 F 72
+
Sbjct: 84 Y 84
>gi|50344739|ref|NP_001002043.1| islet1, like [Danio rerio]
gi|37682137|gb|AAQ97995.1| ISL1 transcription factor, LIM/homeodomain [Danio rerio]
Length = 323
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
S C GCG I+DRF + ++ D +WH CL+CA CH L +CF R G +C++ + R
Sbjct: 17 SFCVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHYSRL 76
Query: 76 SQAR 79
S ++
Sbjct: 77 STSK 80
>gi|431900753|gb|ELK08194.1| LIM/homeobox protein Lhx6 [Pteropus alecto]
Length = 260
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+FR
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFRP 126
Query: 76 SQARY 80
+ R
Sbjct: 127 ALRRV 131
>gi|270013886|gb|EFA10334.1| hypothetical protein TcasGA2_TC012552 [Tribolium castaneum]
Length = 806
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 2 LKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFS 61
++D +SP + C GCG+ + + L+A+D+QWH+ C +C C V LH E
Sbjct: 164 VRDGTPKTSPTSNNANECAGCGKELNEGQALVALDQQWHIWCFKCGTCGVVLHGEY--MG 221
Query: 62 RHGNIYCKQDF 72
R+G YC++D+
Sbjct: 222 RNGQPYCERDY 232
>gi|157118344|ref|XP_001653181.1| lim homeobox protein [Aedes aegypti]
gi|108883304|gb|EAT47529.1| AAEL001373-PA [Aedes aegypti]
Length = 391
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQ 77
C GCGQ I DR+++ L+ D+ WH CL C CH+ L+ SC+ ++ +YCK D++R S+
Sbjct: 18 CEGCGQKIKDRYFMKLSPDQYWHEQCLLCCICHIQLNQ--SCYMKNTKLYCKDDYYRVSR 75
>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
Length = 438
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 14 EEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E S C GCG I D++ L +A D +WH CL+C CH L +CF R G YCK+D+
Sbjct: 22 ERLSLCVGCGTQIHDQYILRVAPDLEWHAACLKCQECHQFLDESCTCFVRDGKTYCKRDY 81
Query: 73 FR 74
R
Sbjct: 82 VR 83
>gi|118344350|ref|NP_001071998.1| transcription factor protein [Ciona intestinalis]
gi|70570117|dbj|BAE06539.1| transcription factor protein [Ciona intestinalis]
Length = 505
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC QPI D++Y+ R WH C+QC+ C PL SCF++ +YC+QD+ + +
Sbjct: 53 CAGCRQPIYDKYYMWVDQRSWHEECVQCSVCRRPLVE--SCFTKDCKLYCQQDYKQLQRC 110
Query: 79 R 79
R
Sbjct: 111 R 111
>gi|258504089|gb|ACV72750.1| LIN-11 [Caenorhabditis remanei]
gi|258504091|gb|ACV72751.1| LIN-11 [Caenorhabditis remanei]
gi|258504093|gb|ACV72752.1| LIN-11 [Caenorhabditis remanei]
gi|258504099|gb|ACV72755.1| LIN-11 [Caenorhabditis remanei]
gi|258504113|gb|ACV72762.1| LIN-11 [Caenorhabditis remanei]
gi|258504115|gb|ACV72763.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C C QPI+DR+ + + WH CL+C C P+ ++CFS+ G I CK D+ R
Sbjct: 61 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPM--SMTCFSKDGLILCKTDYSR 116
>gi|91082483|ref|XP_972328.1| PREDICTED: similar to GA19074-PA [Tribolium castaneum]
gi|270007532|gb|EFA03980.1| hypothetical protein TcasGA2_TC014129 [Tribolium castaneum]
Length = 341
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
C GCG I++RF L A+DR WH CL+C+ C L SCF++ G I CKQD+ R
Sbjct: 187 CAGCGGKIVERFLLHALDRYWHNSCLKCSCCAAMLADIGTSCFTKGGMILCKQDYTR 243
>gi|258504095|gb|ACV72753.1| LIN-11 [Caenorhabditis remanei]
gi|258504097|gb|ACV72754.1| LIN-11 [Caenorhabditis remanei]
gi|258504103|gb|ACV72757.1| LIN-11 [Caenorhabditis remanei]
gi|258504107|gb|ACV72759.1| LIN-11 [Caenorhabditis remanei]
gi|258504109|gb|ACV72760.1| LIN-11 [Caenorhabditis remanei]
gi|258504111|gb|ACV72761.1| LIN-11 [Caenorhabditis remanei]
gi|258504117|gb|ACV72764.1| LIN-11 [Caenorhabditis remanei]
gi|258504119|gb|ACV72765.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C C QPI+DR+ + + WH CL+C C P+ ++CFS+ G I CK D+ R
Sbjct: 61 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPM--SMTCFSKDGLILCKTDYSR 116
>gi|334321462|ref|XP_003340108.1| PREDICTED: LIM/homeobox protein Lhx8-like [Monodelphis domestica]
Length = 331
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
CP K C CG I+D++ L + WH+ CL C+ C L SC+ + +I+CK D
Sbjct: 89 CPPAKCVCSSCGLEIVDKYLLKVNELCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLD 148
Query: 72 FFRYSQAR---YPDLPIP 86
+FR +A +P P P
Sbjct: 149 YFRSQRAEGLLHPGGPRP 166
>gi|258504101|gb|ACV72756.1| LIN-11 [Caenorhabditis remanei]
gi|258504105|gb|ACV72758.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C C QPI+DR+ + + WH CL+C C P+ ++CFS+ G I CK D+ R
Sbjct: 61 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPM--SMTCFSKDGLILCKTDYSR 116
>gi|94957756|ref|NP_001035556.1| LIM/homeobox protein Lhx8 [Gallus gallus]
gi|71800649|gb|AAZ41374.1| LIM homeodomain protein [Gallus gallus]
Length = 347
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
S S C K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+
Sbjct: 55 SGSGCAPSKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIF 114
Query: 68 CKQDFFRYSQAR 79
CK D+FR R
Sbjct: 115 CKLDYFRRYGTR 126
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
++C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 29 ATCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 87
>gi|148237976|ref|NP_001079958.1| LIM homeobox 8 [Xenopus laevis]
gi|34784686|gb|AAH57730.1| MGC68912 protein [Xenopus laevis]
Length = 282
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
K+ C CG I+D++ L D WH+ CL C+ C L SC+ + +IYCK D+FR
Sbjct: 90 KNVCNNCGMEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIYCKLDYFRR 149
Query: 76 SQAR 79
R
Sbjct: 150 YGTR 153
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 2 LKDRDDSSSPCPEEK---SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSEL 57
+ D D P P++K S C GCG I D++ L ++ D +WH CL+CA C+ L
Sbjct: 8 VTDMGDMGDP-PKKKRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESC 66
Query: 58 SCFSRHGNIYCKQDFFR 74
+CF R G YCK+D+ R
Sbjct: 67 TCFVRDGKTYCKRDYIR 83
>gi|339252326|ref|XP_003371386.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
gi|316968365|gb|EFV52646.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
Length = 309
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC +PI DR+ +D+ WH C+ C C PL CF+R G I+CK DF + A
Sbjct: 12 CAGCKKPIYDRYLYHVMDKSWHGSCIVCEVCQTPLDDR--CFTRDGLIFCKTDFLKRYGA 69
Query: 79 R 79
+
Sbjct: 70 K 70
>gi|3319763|emb|CAA04012.1| Lhx7 protein [Mus musculus]
Length = 365
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
CP K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK D
Sbjct: 88 CPPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLD 147
Query: 72 FFRYSQAR 79
+FR R
Sbjct: 148 YFRRYGTR 155
>gi|308485364|ref|XP_003104881.1| CRE-LIN-11 protein [Caenorhabditis remanei]
gi|308257579|gb|EFP01532.1| CRE-LIN-11 protein [Caenorhabditis remanei]
Length = 415
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C C QPI+DR+ + + WH CL+C C P+ ++CFS+ G I CK D+ R
Sbjct: 76 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPM--SMTCFSKDGLILCKTDYSR 131
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 5 RDDSSSPCPEEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRH 63
R +P S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R
Sbjct: 36 RKTGKTPEKRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRD 95
Query: 64 GNIYCKQDFFR 74
G YCK+D+ R
Sbjct: 96 GKTYCKRDYIR 106
>gi|403272543|ref|XP_003928115.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403272545|ref|XP_003928116.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 382
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I+DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|332220030|ref|XP_003259160.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Nomascus leucogenys]
Length = 368
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I+DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|170032119|ref|XP_001843930.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871879|gb|EDS35262.1| lim homeobox protein [Culex quinquefasciatus]
Length = 400
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 12 CPEEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQ 70
C + + C GCGQ I DR+++ ++ D+ WH CL C C++ L+ SCF+++ +YCK
Sbjct: 10 CEKMQEICEGCGQKIKDRYFMKISPDQYWHEQCLLCCICNIQLNH--SCFTKNTKVYCKD 67
Query: 71 DFFR 74
D++R
Sbjct: 68 DYYR 71
>gi|156393340|ref|XP_001636286.1| predicted protein [Nematostella vectensis]
gi|156223388|gb|EDO44223.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + VD WH CLQC C L SCFS+ +YC+ D+
Sbjct: 1 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSR--SCFSKDRKLYCRTDY 52
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C+ L +CF R G YCK+D+ R
Sbjct: 15 SMCVGCGSQITDQYILRVAPDLEWHASCLRCTDCNQYLDESCTCFVRDGKTYCKRDYVR 73
>gi|354500655|ref|XP_003512414.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Cricetulus griseus]
Length = 366
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 142
>gi|395825137|ref|XP_003785798.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Otolemur
garnettii]
Length = 382
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I+DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|148676721|gb|EDL08668.1| LIM homeobox protein 6, isoform CRA_b [Mus musculus]
Length = 380
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 99 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 156
>gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|291327513|ref|NP_001167540.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|109019319|ref|XP_001084612.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Macaca mulatta]
gi|109019321|ref|XP_001084727.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Macaca mulatta]
gi|114561083|ref|XP_001174539.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Pan troglodytes]
gi|114561085|ref|XP_001174542.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Pan troglodytes]
gi|296229940|ref|XP_002760489.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Callithrix
jacchus]
gi|397508364|ref|XP_003824628.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Pan paniscus]
gi|397508366|ref|XP_003824629.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Pan paniscus]
gi|402858034|ref|XP_003893535.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Papio anubis]
gi|402858036|ref|XP_003893536.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Papio anubis]
gi|426332555|ref|XP_004027869.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Gorilla gorilla gorilla]
gi|426332557|ref|XP_004027870.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Gorilla gorilla gorilla]
gi|27923801|sp|Q8TE12.1|LMX1A_HUMAN RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|19879681|gb|AAL82892.1| LIM homeobox transcription factor 1 alpha [Homo sapiens]
gi|119611150|gb|EAW90744.1| LIM homeobox transcription factor 1, alpha, isoform CRA_b [Homo
sapiens]
gi|182887815|gb|AAI60062.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|193785405|dbj|BAG54558.1| unnamed protein product [Homo sapiens]
gi|208966672|dbj|BAG73350.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|355558990|gb|EHH15770.1| hypothetical protein EGK_01906 [Macaca mulatta]
gi|355746154|gb|EHH50779.1| hypothetical protein EGM_01656 [Macaca fascicularis]
Length = 382
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I+DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|133892051|ref|NP_001076596.1| LIM/homeobox protein Lhx6 isoform 4 [Mus musculus]
gi|148676720|gb|EDL08667.1| LIM homeobox protein 6, isoform CRA_a [Mus musculus]
Length = 348
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 124
>gi|5738954|dbj|BAA83420.1| LIM-homeodomain (LHX) protein 6.1b [Mus musculus]
Length = 348
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 124
>gi|348531406|ref|XP_003453200.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 386
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 9 SSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYC 68
+ C + K C CG I+DR+ L + WH+ CL C+ C L +SC+ R ++C
Sbjct: 96 TEACVQGKPVCTSCGLEIVDRYLLKVNNLCWHVRCLSCSVCKTSLGRHVSCYIRDKEVFC 155
Query: 69 KQDFFRYSQAR 79
K D+FR R
Sbjct: 156 KLDYFRRYGTR 166
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQ 77
C GCG PI D++ L +A D +WH CL+C C + L +CF R G +C++D+ R
Sbjct: 1 CVGCGSPIQDQYILRVAPDLEWHASCLKCVECGIFLDENCTCFVRDGKTFCRRDYVRLFG 60
Query: 78 AR 79
A+
Sbjct: 61 AK 62
>gi|133893073|ref|NP_001076594.1| LIM/homeobox protein Lhx6 isoform 2 [Mus musculus]
Length = 377
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 153
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|148676722|gb|EDL08669.1| LIM homeobox protein 6, isoform CRA_c [Mus musculus]
Length = 395
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 99 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 156
>gi|354500653|ref|XP_003512413.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Cricetulus griseus]
Length = 377
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 153
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 12 CPEEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQ 70
C S C GCG I D++ L +A D +WH CL+CA C L +CF R G YCK+
Sbjct: 44 CKRRASLCVGCGGSIQDQYILRVAPDLEWHAACLKCADCCTYLDETCTCFVRDGKPYCKR 103
Query: 71 DFFR 74
D+ R
Sbjct: 104 DYLR 107
>gi|344241263|gb|EGV97366.1| LIM/homeobox protein Lhx6 [Cricetulus griseus]
Length = 363
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 124
>gi|341889206|gb|EGT45141.1| CBN-LIN-11 protein [Caenorhabditis brenneri]
Length = 372
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C C QPI+DR+ + + WH CL+C C P+ ++CFS+ G I CK D+ R
Sbjct: 73 NECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPM--SMTCFSKDGLILCKSDYSR 128
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 6 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 64
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|194747131|ref|XP_001956006.1| GF24989 [Drosophila ananassae]
gi|190623288|gb|EDV38812.1| GF24989 [Drosophila ananassae]
Length = 554
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P+ S C C QPI DR+ + V+ +H GCL+C C LH SCF+R G +YC+ D+
Sbjct: 201 PQPPSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACS--LHLVHSCFAREGKLYCRIDY 258
Query: 73 FR 74
R
Sbjct: 259 ER 260
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 12 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 70
>gi|296194639|ref|XP_002745038.1| PREDICTED: insulin gene enhancer protein ISL-1 [Callithrix
jacchus]
Length = 348
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|149038911|gb|EDL93131.1| LIM homeobox protein 6 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 373
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 92 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 149
>gi|432853477|ref|XP_004067726.1| PREDICTED: LIM/homeobox protein Lhx8 [Oryzias latipes]
Length = 338
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+S C C + I+D++ L D WH+ CL C+ C L S SC+ + I+CK D+FR
Sbjct: 52 RSVCANCNEEIVDKYLLKVNDLCWHVRCLSCSVCQTSLGSHASCYIKEKEIFCKLDYFR 110
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri
boliviensis boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 49 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 107
>gi|133892446|ref|NP_001076595.1| LIM/homeobox protein Lhx6 isoform 3 [Mus musculus]
gi|341940899|sp|Q9R1R0.2|LHX6_MOUSE RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|40787713|gb|AAH65077.1| Lhx6 protein [Mus musculus]
Length = 363
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 124
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature:
LIM2, bp 517 .. 669; amino acid feature: homeodomain,
bp 820 .. 999 [Gallus gallus]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|5738956|dbj|BAA83421.1| LIM-homeodomain (LHX) protein 6.1a [Mus musculus]
Length = 363
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 124
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|195012851|ref|XP_001983760.1| GH15398 [Drosophila grimshawi]
gi|193897242|gb|EDV96108.1| GH15398 [Drosophila grimshawi]
Length = 618
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DR+ + D WH CL C +C + LH +C+ R+ +YCKQD
Sbjct: 248 CEKNYELCEGCGQKIHDRYLMNVGDANWHEQCLACCYCGLQLHH--TCYVRNSKLYCKQD 305
Query: 72 FFR 74
+ R
Sbjct: 306 YDR 308
>gi|148676723|gb|EDL08670.1| LIM homeobox protein 6, isoform CRA_d [Mus musculus]
Length = 388
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 92 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 149
>gi|133891794|ref|NP_032526.2| LIM/homeobox protein Lhx6 isoform 1 [Mus musculus]
Length = 392
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 153
>gi|354500651|ref|XP_003512412.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Cricetulus griseus]
Length = 392
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 153
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+S C GC +PI DRF + D WH CLQC C PL + SC+ R +YCK D+
Sbjct: 53 RSVCEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTN--SCYFRERKLYCKHDY 107
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|157821727|ref|NP_001101307.1| LIM/homeobox protein Lhx6 [Rattus norvegicus]
gi|149038910|gb|EDL93130.1| LIM homeobox protein 6 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 388
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ IYCK D+F
Sbjct: 92 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDYF 149
>gi|157115827|ref|XP_001658301.1| hypothetical protein AaeL_AAEL001214 [Aedes aegypti]
Length = 181
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFRYSQ 77
CGGCG I +RF+L A+DR WH CL+C+ C L SC++R G I CK D+
Sbjct: 77 CGGCGGKITERFFLHALDRYWHNSCLKCSCCGAMLADIGSSCYTRSGMILCKADYSSEES 136
Query: 78 ARYPDLP--IPKTLVSFL 93
+ + + P T V+ L
Sbjct: 137 SVWGEKNNRTPTTKVTLL 154
>gi|358339076|dbj|GAA47203.1| LIM/homeobox protein Lhx2 [Clonorchis sinensis]
Length = 761
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQ-WHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GCG I+ L D + WH CL+C C LH+E SCF+R G+IYCK+D+
Sbjct: 113 CTGCGTKIMQSHLLCLSDGELWHTECLRCCECGKSLHAEASCFNRSGSIYCKEDY 167
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 20 SMCVGCGSKIQDQYILRVAPDLEWHAACLKCADCDQFLDETCTCFVREGKTYCKRDYAR 78
>gi|391334316|ref|XP_003741551.1| PREDICTED: LIM domain transcription factor LMO4-A-like
[Metaseiulus occidentalis]
Length = 189
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 11 PCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCK 69
P P C CG I DR++L A+DR WH CL+C+ C PL SCF ++ I C+
Sbjct: 29 PSPPANRPCAACGGAIQDRYFLHAMDRYWHHSCLKCSLCATPLADIGTSCFFKNDMILCR 88
Query: 70 QDFFR 74
D+ R
Sbjct: 89 TDYVR 93
>gi|156364672|ref|XP_001626470.1| predicted protein [Nematostella vectensis]
gi|156213347|gb|EDO34370.1| predicted protein [Nematostella vectensis]
Length = 304
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC I+DR+ + R WH CL+C C L E +C+++ G IYCK D+ R
Sbjct: 28 CVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYAR 83
>gi|297662848|ref|XP_002809900.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Pongo abelii]
Length = 489
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I+DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|322787267|gb|EFZ13403.1| hypothetical protein SINV_03010 [Solenopsis invicta]
Length = 334
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF R +YC+ D+
Sbjct: 59 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 112
>gi|224058535|ref|XP_002189228.1| PREDICTED: LIM/homeobox protein Lhx8 [Taeniopygia guttata]
Length = 347
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
S S C K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+
Sbjct: 55 SGSGCAPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIF 114
Query: 68 CKQDFFRYSQAR 79
CK D+FR R
Sbjct: 115 CKLDYFRRYGTR 126
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 12 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 70
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQCLDESCTCFVRDGKTYCKRDYIR 73
>gi|322787264|gb|EFZ13400.1| hypothetical protein SINV_02203 [Solenopsis invicta]
Length = 333
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF R +YC+ D+
Sbjct: 44 CGGCGERVRERTVLCVGGRTWHSRCLRCCACARPLHDQHSCFLRGMRVYCRHDY 97
>gi|432105544|gb|ELK31741.1| Insulin protein enhancer protein ISL-1 [Myotis davidii]
Length = 199
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYVR 73
>gi|224058880|ref|XP_002190501.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Taeniopygia
guttata]
Length = 379
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I+DRF L D WH C+QCA C PL + +CF R +YCK D+
Sbjct: 30 KSVCEGCQRVILDRFLLRLNDSLWHEQCVQCASCKEPLQT--TCFYRDKKLYCKLDY 84
>gi|410924249|ref|XP_003975594.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 338
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
KS C C + I+DR+ L D WH+ CL C C L +SC+ + ++CK D+FR
Sbjct: 55 KSVCTSCNKDIVDRYLLKVNDLCWHVRCLSCTVCKTSLGRHVSCYIKEKQVFCKLDYFRR 114
Query: 76 SQAR 79
R
Sbjct: 115 YGTR 118
>gi|147900853|ref|NP_001079705.1| LIM domain transcription factor LMO4-B [Xenopus laevis]
gi|82210060|sp|Q801P0.1|LMO4B_XENLA RecName: Full=LIM domain transcription factor LMO4-B; AltName:
Full=LIM domain only protein 4-B; Short=LMO-4-B
gi|29126820|gb|AAH48020.1| Lmo4-b protein [Xenopus laevis]
Length = 171
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
+C GCG I DRF L ++DR WH CL+C+ C L SC+++ G I C+ D+ R
Sbjct: 23 ACAGCGGKIADRFLLYSMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIR 80
>gi|410960782|ref|XP_003986966.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Felis catus]
Length = 354
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQ 77
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R +
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRXGR 86
Query: 78 ARYPDL 83
R P L
Sbjct: 87 -REPGL 91
>gi|281349042|gb|EFB24626.1| hypothetical protein PANDA_015045 [Ailuropoda melanoleuca]
Length = 329
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 8 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 64
>gi|47206717|emb|CAG12297.1| unnamed protein product [Tetraodon nigroviridis]
Length = 137
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
+C GCG I DRF L +++R WH CL+C+ CH L + SC+SR G I C+ D+ R
Sbjct: 2 TCAGCGGRIADRFLLFSMERYWHTRCLRCSCCHAQLGALSRSCYSRGGLILCRDDYAR 59
>gi|225707508|gb|ACO09600.1| LIM domain transcription factor LMO4 [Osmerus mordax]
Length = 126
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELS-CFSRHGNIYCKQDFFR 74
C GCG I DRF L +++R WH CL+C+ CH L S C+S+ G I CK D+ R
Sbjct: 23 CAGCGGRIADRFLLFSMERYWHTRCLKCSCCHAHLGEIGSTCYSKGGMILCKNDYIR 79
>gi|392925293|ref|NP_001256980.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
gi|351020895|emb|CCD62868.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
Length = 316
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
E C GCG I DR+ ++ +H CL+C+ C + L S CFSRHGNIYC+ D
Sbjct: 38 EDKLCSGCGCLIKDRYIYRVMEDSYHESCLRCSCCQLSLSSFKKCFSRHGNIYCEHD 94
>gi|270011029|gb|EFA07477.1| tailup [Tribolium castaneum]
Length = 411
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 13 PEEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
P S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D
Sbjct: 20 PRRLSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRD 79
Query: 72 FFRYSQAR 79
+ R A+
Sbjct: 80 YVRLFGAK 87
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 17 SSCGGCGQPI-IDRFYLLAVDRQWHLGCLQCAHCHVPL-HSELSCFSRHGNIYCKQDFFR 74
+ C CG D F + A + +H+ C +C C PL + GN+YCK+D
Sbjct: 86 AKCDRCGSSFSKDDFVMRAKSKIYHIKCFKCCACSRPLVPGDEFALRDGGNLYCKEDHDH 145
Query: 75 YSQARYPDLP-IPKT 88
+ P P +P T
Sbjct: 146 MEKTSIPTTPHLPST 160
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|350404762|ref|XP_003487212.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 331
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF R +YC+ D+
Sbjct: 56 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 109
>gi|383857875|ref|XP_003704429.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 358
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF R +YC+ D+
Sbjct: 83 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 136
>gi|340721085|ref|XP_003398956.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
Length = 329
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF R +YC+ D+
Sbjct: 54 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 107
>gi|328781528|ref|XP_001121397.2| PREDICTED: LIM/homeobox protein Awh [Apis mellifera]
Length = 352
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF R +YC+ D+
Sbjct: 77 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 130
>gi|91077954|ref|XP_967240.1| PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum]
Length = 472
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 3 KDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSR 62
K RD C + C GCGQ I DR+ + D WH CL C+ C V L SC++R
Sbjct: 112 KARDGRLIKCEKTYEMCEGCGQKIHDRYLMRVADASWHEHCLTCSICGVQLAH--SCYTR 169
Query: 63 HGNIYCKQDFFR 74
+ +YCK D+ R
Sbjct: 170 NTKLYCKADYDR 181
>gi|344278994|ref|XP_003411276.1| PREDICTED: LIM/homeobox protein Lhx8 [Loxodonta africana]
Length = 346
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S C K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK
Sbjct: 56 SGCASGKCVCNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 115
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 116 LDYFRRYGTR 125
>gi|258504135|gb|ACV72767.1| LIM-6 [Caenorhabditis remanei]
gi|258504137|gb|ACV72768.1| LIM-6 [Caenorhabditis remanei]
gi|258504139|gb|ACV72769.1| LIM-6 [Caenorhabditis remanei]
gi|258504141|gb|ACV72770.1| LIM-6 [Caenorhabditis remanei]
gi|258504143|gb|ACV72771.1| LIM-6 [Caenorhabditis remanei]
gi|258504147|gb|ACV72773.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
E C CG I DR+ +D +H CL+C C L S CFSRHGNIYC+QD
Sbjct: 5 EDKLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQD 61
>gi|426384765|ref|XP_004058922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Gorilla gorilla
gorilla]
Length = 393
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Takifugu rubripes]
Length = 375
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
S C GC +PI DRF + D WH CLQC C PL + SC+ R +YCK D+
Sbjct: 31 SVCEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTT--SCYFRERKLYCKHDY 84
>gi|380013576|ref|XP_003690828.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 351
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF R +YC+ D+
Sbjct: 76 CGGCGESVRERTVLCVGGRTWHSRCLKCCACARPLHDQHSCFLRGMRLYCRHDY 129
>gi|194869786|ref|XP_001972521.1| GG13839 [Drosophila erecta]
gi|190654304|gb|EDV51547.1| GG13839 [Drosophila erecta]
Length = 531
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P + S C C QPI DR+ + V+ +H GCL+C C LH SC++R G +YC+ D+
Sbjct: 180 PPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDY 237
Query: 73 FR 74
R
Sbjct: 238 ER 239
>gi|258504145|gb|ACV72772.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
E C CG I DR+ +D +H CL+C C L S CFSRHGNIYC+QD
Sbjct: 5 EDKLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQD 61
>gi|258504133|gb|ACV72766.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
E C CG I DR+ +D +H CL+C C L S CFSRHGNIYC+QD
Sbjct: 5 EDKLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQD 61
>gi|291237424|ref|XP_002738638.1| PREDICTED: Lim homeobox transcription factor [Saccoglossus
kowalevskii]
Length = 441
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
K+ C GC QPI DRF + ++ WH CLQC+ C PL SC+ + +YCK D+
Sbjct: 38 KALCAGCQQPIEDRFLMRVMENSWHEQCLQCSVCQSPLSR--SCYFKDRKLYCKGDY 92
>gi|308489722|ref|XP_003107054.1| CRE-LIM-6 protein [Caenorhabditis remanei]
gi|308252942|gb|EFO96894.1| CRE-LIM-6 protein [Caenorhabditis remanei]
Length = 314
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 32/57 (56%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
E C CG I DR+ +D +H CL+C C L S CFSRHGNIYC+QD
Sbjct: 38 EDKLCSACGCLIKDRYIYRVMDESYHETCLRCYCCQSSLSSFKKCFSRHGNIYCEQD 94
>gi|195589788|ref|XP_002084631.1| GD12730 [Drosophila simulans]
gi|194196640|gb|EDX10216.1| GD12730 [Drosophila simulans]
Length = 527
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P + S C C QPI DR+ + V+ +H GCL+C C LH SC++R G +YC+ D+
Sbjct: 176 PPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDY 233
Query: 73 FR 74
R
Sbjct: 234 ER 235
>gi|195327095|ref|XP_002030257.1| GM24666 [Drosophila sechellia]
gi|194119200|gb|EDW41243.1| GM24666 [Drosophila sechellia]
Length = 527
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P + S C C QPI DR+ + V+ +H GCL+C C LH SC++R G +YC+ D+
Sbjct: 176 PPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDY 233
Query: 73 FR 74
R
Sbjct: 234 ER 235
>gi|45382493|ref|NP_990689.1| LIM/homeobox protein LMX-1.2 [Gallus gallus]
gi|1708855|sp|P53413.1|LMX1B_CHICK RecName: Full=LIM/homeobox protein LMX-1.2; Short=Homeobox
protein LMX-1; Short=LIM/homeobox protein 1; Short=LMX
gi|1050198|gb|AAA96240.1| LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain
bp 655-831 [Gallus gallus]
Length = 377
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SECPHQ-AVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C L +CF R+G YCK+D+ R
Sbjct: 2 CVGCGTQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDYIR 58
>gi|1145814|gb|AAA84995.1| LIM homeodomain protein [Gallus gallus]
Length = 377
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SECPHQ-AVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|392925295|ref|NP_001256981.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
gi|351020894|emb|CCD62867.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
Length = 310
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 15 EKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
E C GCG I DR+ ++ +H CL+C+ C + L S CFSRHGNIYC+ D
Sbjct: 38 EDKLCSGCGCLIKDRYIYRVMEDSYHESCLRCSCCQLSLSSFKKCFSRHGNIYCEHD 94
>gi|270004863|gb|EFA01311.1| arrowhead [Tribolium castaneum]
Length = 349
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C CG+PI D+F L R WH CL+C C + L + SCF R IYCK D+
Sbjct: 69 CSACGEPISDKFLLEVSGRSWHARCLRCCVCQLQLDRQPSCFIRDRAIYCKADY 122
>gi|444724034|gb|ELW64656.1| LIM/homeobox protein Lhx6 [Tupaia chinensis]
Length = 336
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 45 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 102
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|301780216|ref|XP_002925525.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Ailuropoda
melanoleuca]
Length = 540
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|326924822|ref|XP_003208624.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha-like [Meleagris gallopavo]
Length = 367
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 LKDRDDSSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFS 61
LK + S +S C GC + I DRF L D WH C+QC C PLH+ +CF
Sbjct: 5 LKMEETLQSRAATPRSVCEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHT--TCFY 62
Query: 62 RHGNIYCKQDF 72
R +YCK D+
Sbjct: 63 RDKKLYCKLDY 73
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid
feature: LIM1, bp 155 .. 307; amino acid feature: LIM2,
bp 341 .. 493 [Rattus norvegicus]
Length = 360
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|71361857|gb|AAZ30032.1| LIM homeodomain protein, partial [Gallus gallus]
Length = 235
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 27 KNVCSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYF 84
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix
jacchus]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|195493804|ref|XP_002094570.1| GE20130 [Drosophila yakuba]
gi|194180671|gb|EDW94282.1| GE20130 [Drosophila yakuba]
Length = 540
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P + S C C QPI DR+ + V+ +H GCL+C C LH SC++R G +YC+ D+
Sbjct: 189 PPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDY 246
Query: 73 FR 74
R
Sbjct: 247 ER 248
>gi|148224772|ref|NP_001079179.1| LIM domain transcription factor LMO4-A [Xenopus laevis]
gi|82211818|sp|Q8AW92.1|LMO4A_XENLA RecName: Full=LIM domain transcription factor LMO4-A; AltName:
Full=LIM domain only protein 4-A; Short=LMO-4-A;
AltName: Full=Xlmo4
gi|26986407|emb|CAD54077.1| lmo4 protein [Xenopus laevis]
gi|83318438|gb|AAI08586.1| Lmo4-A protein [Xenopus laevis]
Length = 171
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 1 MLKDRDDSSSPCPEEKS-----SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS 55
M+ +R S+ + +C GCG I DRF L ++DR WH CL+C+ C L
Sbjct: 1 MVNNRSSESTTTAVSSNGSPPKACAGCGGKIGDRFLLYSMDRYWHTRCLKCSCCQAQLGE 60
Query: 56 -ELSCFSRHGNIYCKQDFFR 74
SC+++ G I C+ D+ R
Sbjct: 61 IGTSCYTKSGMILCRNDYIR 80
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRY 75
KS C GCG I DR+ L + WH CLQC C PL SCF ++G + CK D+ R
Sbjct: 12 KSLCCGCGLTIEDRYLLRVMGNSWHERCLQCDFCRAPLTR--SCFVKNGRLLCKLDYDRL 69
Query: 76 SQAR 79
AR
Sbjct: 70 YAAR 73
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|291410745|ref|XP_002721643.1| PREDICTED: ISL LIM homeobox 2 [Oryctolagus cuniculus]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|391346181|ref|XP_003747357.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Metaseiulus occidentalis]
Length = 434
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC +PI+DR+ + + WH CL C+ CH H SC+SR I+CK D+ R
Sbjct: 59 CAGCERPIVDRYIMKVRESSWHESCLICSVCH--QHLATSCYSRERRIFCKNDYDR 112
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 17 SSCGGCGQPII-DRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+ C C I + A+D+ +HL C C C L R+G +YC+QDF
Sbjct: 116 AKCAACTGSIAPAELVMKALDQVYHLSCFLCCTCGRQLQRGDEYVLRNGRLYCRQDF 172
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|126272190|ref|XP_001362509.1| PREDICTED: insulin gene enhancer protein ISL-2 [Monodelphis
domestica]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C L +CF R+G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDYIR 83
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIR 73
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur
garnettii]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|358335730|dbj|GAA54362.1| LIM domain transcription factor LMO4-B [Clonorchis sinensis]
Length = 303
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDFFR 74
C GCG PI++R L A+DR WH GCL C+ C + L EL S F R + C+QD+ R
Sbjct: 5 CAGCGDPIVERTLLNALDRFWHTGCLNCSCCGLRL-DELGPSVFVRSDMLLCRQDYLR 61
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Ovis aries]
Length = 366
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|350579610|ref|XP_003480648.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like [Sus
scrofa]
Length = 332
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|91078266|ref|XP_971202.1| PREDICTED: similar to GA10520-PA [Tribolium castaneum]
Length = 343
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C CG+PI D+F L R WH CL+C C + L + SCF R IYCK D+ +
Sbjct: 83 CSACGEPISDKFLLEVSGRSWHARCLRCCVCQLQLDRQPSCFIRDRAIYCKADYAK 138
>gi|397496393|ref|XP_003819022.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2 [Pan paniscus]
Length = 357
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|111307610|gb|AAI20881.1| Isl2 protein [Mus musculus]
gi|157423231|gb|AAI48308.2| Isl2 protein [Mus musculus]
Length = 174
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|383792181|ref|NP_001244317.1| LIM homeobox transcription factor 1-alpha [Gallus gallus]
Length = 380
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+S C GC + I DRF L D WH C+QC C PLH+ +CF R +YCK D+
Sbjct: 32 RSVCEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHT--TCFYRDKKLYCKLDY 86
>gi|351696280|gb|EHA99198.1| LIM/homeobox protein Lhx8 [Heterocephalus glaber]
Length = 348
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP K C CG I+D++ L WH+ CL C+ C L SC+ + +I+CK
Sbjct: 58 SGCPPGKCVCNSCGLEIVDKYLLKVNGLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCK 117
Query: 70 QDFFRYSQAR 79
D+FR R
Sbjct: 118 LDYFRRYGTR 127
>gi|348505012|ref|XP_003440055.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 338
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
++ C C + I+D++ L D WH+ CL C+ C L S SC+ + ++CK D+FR
Sbjct: 52 RTVCASCNEEIVDKYLLKVNDLCWHVRCLSCSVCQTSLGSHTSCYIKEKEVFCKLDYFR 110
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|390458307|ref|XP_002806566.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Callithrix jacchus]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|324516282|gb|ADY46481.1| Homeobox protein ceh-14 [Ascaris suum]
Length = 324
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
CG C +PI DR+ L +DR +H CL+C HC PL S+ C+ + G +CK F++
Sbjct: 19 CGKCEEPIRDRYLLKVLDRSYHTQCLRCTHCEQPLTSK--CYLKGGQPFCKDHFYK 72
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYIR 73
>gi|348570158|ref|XP_003470864.1| PREDICTED: LIM/homeobox protein Lhx6-like [Cavia porcellus]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A;
Short=Islet-2A
Length = 358
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L +A D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|390458309|ref|XP_003732088.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Callithrix jacchus]
Length = 348
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|344271983|ref|XP_003407816.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Loxodonta africana]
Length = 377
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|74355622|gb|AAI03937.1| LIM homeobox 6 [Homo sapiens]
gi|119607921|gb|EAW87515.1| LIM homeobox 6, isoform CRA_a [Homo sapiens]
Length = 348
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|410978995|ref|XP_003995872.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Felis catus]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|410043123|ref|XP_003312314.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pan troglodytes]
Length = 348
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
++C GCG I D F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 25 ATCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|395824117|ref|XP_003785317.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Otolemur garnettii]
Length = 377
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|5738958|dbj|BAA83422.1| LIM-homeodomain (LHX) protein 6.1a [Homo sapiens]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|117645548|emb|CAL38240.1| hypothetical protein [synthetic construct]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|5738960|dbj|BAA83423.1| LIM-homeodomain (LHX) protein 6.1b [Homo sapiens]
Length = 348
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
++C GCG I D F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 25 ATCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|390458313|ref|XP_003732090.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 4 [Callithrix jacchus]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|194869797|ref|XP_001972523.1| GG15572 [Drosophila erecta]
gi|190654306|gb|EDV51549.1| GG15572 [Drosophila erecta]
Length = 652
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DRF + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 276 CEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMD 333
Query: 72 FFR 74
+ R
Sbjct: 334 YDR 336
>gi|74355157|gb|AAI03939.1| LIM homeobox 6 [Homo sapiens]
Length = 362
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis
catus]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|332229915|ref|XP_003264132.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Nomascus
leucogenys]
Length = 365
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|334191691|ref|NP_001229263.1| LIM/homeobox protein Lhx6 isoform 4 [Homo sapiens]
gi|90185239|sp|Q9UPM6.2|LHX6_HUMAN RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|7018428|emb|CAB66505.1| hypothetical protein [Homo sapiens]
gi|74353529|gb|AAI03938.1| LIM homeobox 6 [Homo sapiens]
gi|117646920|emb|CAL37575.1| hypothetical protein [synthetic construct]
gi|119607922|gb|EAW87516.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|119607923|gb|EAW87517.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|158260677|dbj|BAF82516.1| unnamed protein product [Homo sapiens]
gi|189054037|dbj|BAG36544.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|395824119|ref|XP_003785318.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Otolemur garnettii]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|297270226|ref|XP_002800034.1| PREDICTED: LIM/homeobox protein Lhx6 [Macaca mulatta]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|334191689|ref|NP_001229262.1| LIM/homeobox protein Lhx6 isoform 3 [Homo sapiens]
gi|221041678|dbj|BAH12516.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|403266045|ref|XP_003925208.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|281348858|gb|EFB24442.1| hypothetical protein PANDA_002084 [Ailuropoda melanoleuca]
Length = 368
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 18 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 72
>gi|410043125|ref|XP_003951564.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan troglodytes]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|344271981|ref|XP_003407815.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Loxodonta africana]
Length = 392
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|297685274|ref|XP_002820220.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Pongo abelii]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|297270224|ref|XP_001088818.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Macaca mulatta]
Length = 377
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|296482369|tpg|DAA24484.1| TPA: LIM homeobox 6 isoform 2 [Bos taurus]
Length = 377
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|281337700|gb|EFB13284.1| hypothetical protein PANDA_004030 [Ailuropoda melanoleuca]
Length = 360
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 69 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 126
>gi|134284361|ref|NP_954629.2| LIM/homeobox protein Lhx6 isoform 2 [Homo sapiens]
gi|297685272|ref|XP_002820219.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pongo abelii]
Length = 377
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|122934839|gb|ABM68157.1| LHX6 [Lagothrix lagotricha]
Length = 198
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|195589796|ref|XP_002084635.1| GD14373 [Drosophila simulans]
gi|194196644|gb|EDX10220.1| GD14373 [Drosophila simulans]
Length = 642
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DRF + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 270 CEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMD 327
Query: 72 FFR 74
+ R
Sbjct: 328 YDR 330
>gi|195493808|ref|XP_002094572.1| GE21898 [Drosophila yakuba]
gi|194180673|gb|EDW94284.1| GE21898 [Drosophila yakuba]
Length = 642
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DRF + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 268 CEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMD 325
Query: 72 FFR 74
+ R
Sbjct: 326 YDR 328
>gi|121483796|gb|ABM54189.1| LHX6 [Pan paniscus]
gi|124054101|gb|ABM89234.1| LHX6 [Pongo pygmaeus]
Length = 198
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|403266043|ref|XP_003925207.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|345321290|ref|XP_003430404.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Ornithorhynchus
anatinus]
Length = 347
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK D+
Sbjct: 60 PPAKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
Query: 73 FRYSQAR 79
FR R
Sbjct: 120 FRRYGTR 126
>gi|344271985|ref|XP_003407817.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Loxodonta africana]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|195327101|ref|XP_002030260.1| GM25340 [Drosophila sechellia]
gi|194119203|gb|EDW41246.1| GM25340 [Drosophila sechellia]
Length = 637
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DRF + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 267 CEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMD 324
Query: 72 FFR 74
+ R
Sbjct: 325 YDR 327
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|390458311|ref|XP_003732089.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Callithrix jacchus]
Length = 381
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|351694308|gb|EHA97226.1| LIM/homeobox protein Lhx6 [Heterocephalus glaber]
Length = 294
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 45 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 102
>gi|167773589|gb|ABZ92229.1| LIM homeobox 6 [synthetic construct]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|124111083|gb|ABM91915.1| LHX6 [Pan troglodytes]
Length = 198
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|402896489|ref|XP_003911330.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6 [Papio
anubis]
Length = 390
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|440906624|gb|ELR56864.1| LIM/homeobox protein Lhx6, partial [Bos grunniens mutus]
Length = 360
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 69 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 126
>gi|380013153|ref|XP_003690632.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 332
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P CGGCG+ + +R L R WH CL+C C PLH + SCF + +YC+ D+
Sbjct: 36 PANVMECGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHDY 95
>gi|297270222|ref|XP_001089041.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Macaca mulatta]
Length = 392
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|442631924|ref|NP_001261754.1| CG32105, isoform C [Drosophila melanogaster]
gi|440215685|gb|AGB94447.1| CG32105, isoform C [Drosophila melanogaster]
Length = 639
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DRF + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 267 CEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMD 324
Query: 72 FFR 74
+ R
Sbjct: 325 YDR 327
>gi|24663250|ref|NP_729801.1| CG32105, isoform B [Drosophila melanogaster]
gi|23093601|gb|AAF49930.2| CG32105, isoform B [Drosophila melanogaster]
gi|28316896|gb|AAO39470.1| RE70810p [Drosophila melanogaster]
Length = 640
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DRF + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 268 CEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMD 325
Query: 72 FFR 74
+ R
Sbjct: 326 YDR 328
>gi|348555669|ref|XP_003463646.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cavia
porcellus]
Length = 371
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYAR 83
>gi|332229917|ref|XP_003264133.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Nomascus
leucogenys]
Length = 376
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|449478466|ref|XP_002188127.2| PREDICTED: LIM/homeobox protein Lhx6 [Taeniopygia guttata]
Length = 421
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 125 KNVCSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQHSCYIKNKEIFCKMDYF 182
>gi|397526998|ref|XP_003833397.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan paniscus]
Length = 377
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 81 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 138
>gi|395824115|ref|XP_003785316.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Otolemur garnettii]
Length = 392
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|355567465|gb|EHH23806.1| hypothetical protein EGK_07356 [Macaca mulatta]
Length = 363
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|332832786|ref|XP_001135172.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pan troglodytes]
Length = 392
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|328781496|ref|XP_001121365.2| PREDICTED: LIM/homeobox protein Awh-like [Apis mellifera]
Length = 332
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P CGGCG+ + +R L R WH CL+C C PLH + SCF + +YC+ D+
Sbjct: 36 PANVMECGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHDY 95
>gi|410921390|ref|XP_003974166.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Takifugu rubripes]
Length = 354
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
++++ C GC +PI DRF L D WH C++CA C L SCF R +YCKQD+
Sbjct: 2 DQRAVCAGCQRPIRDRFLLRVTDCLWHEACVRCAACGDALKK--SCFVRGRKLYCKQDY 58
>gi|309243111|ref|NP_001020338.2| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|48375211|gb|AAT42258.1| LIM homeodomain protein Lmx1b.1 [Danio rerio]
gi|190337176|gb|AAI62952.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|190338183|gb|AAI62932.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
Length = 375
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
++ C GC +PI DRF + + WH CLQCA C PL + SC+ R +YCK D+
Sbjct: 30 QAVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTT--SCYFRERKLYCKYDY 84
>gi|301760410|ref|XP_002916006.1| PREDICTED: LIM/homeobox protein Lhx6-like [Ailuropoda melanoleuca]
Length = 390
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 94 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 151
>gi|134284359|ref|NP_055183.2| LIM/homeobox protein Lhx6 isoform 1 [Homo sapiens]
gi|297685270|ref|XP_002820218.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pongo abelii]
gi|221042862|dbj|BAH13108.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|62461837|gb|AAX83055.1| LIM homeodomain protein [Danio rerio]
Length = 375
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
++ C GC +PI DRF + + WH CLQCA C PL + SC+ R +YCK D+
Sbjct: 30 QAVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTT--SCYFRERKLYCKYDY 84
>gi|332229919|ref|XP_003264134.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Nomascus
leucogenys]
Length = 391
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|391336382|ref|XP_003742560.1| PREDICTED: uncharacterized protein LOC100906407 [Metaseiulus
occidentalis]
Length = 791
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 8 SSSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIY 67
S SP E K C GCG ++D L+A+D+QWH+ C +C C LH E S+ Y
Sbjct: 155 SESPLLESKGDCAGCGDALVDGQALVALDKQWHIYCFKCTACGQLLHGEY--MSKDDQPY 212
Query: 68 CKQDF 72
C++D+
Sbjct: 213 CEKDY 217
>gi|300797193|ref|NP_001179777.1| LIM/homeobox protein Lhx6 [Bos taurus]
gi|296482368|tpg|DAA24483.1| TPA: LIM homeobox 6 isoform 1 [Bos taurus]
Length = 392
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 96 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 153
>gi|410978997|ref|XP_003995873.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Felis catus]
Length = 404
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|327276679|ref|XP_003223095.1| PREDICTED: LIM/homeobox protein Lhx8-like [Anolis carolinensis]
Length = 379
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 9 SSPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYC 68
S C K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+C
Sbjct: 88 SGGCAPGKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFC 147
Query: 69 KQDFFRYSQAR 79
K D+FR R
Sbjct: 148 KLDYFRRYGTR 158
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 11 PCPEEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
P E S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK
Sbjct: 48 PKKERLSLCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCK 107
Query: 70 QDFFR 74
+D+ R
Sbjct: 108 RDYVR 112
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DRF L D WH C+QCA C PL E +CF R +YCK D+
Sbjct: 32 KSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPL--ETTCFYRDKKLYCKYDY 86
>gi|307195464|gb|EFN77350.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 291
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF + +YC+ D+
Sbjct: 3 CGGCGERVRERIVLCVGGRTWHSRCLRCCACARPLHDQHSCFLKGMRLYCRHDY 56
>gi|426362929|ref|XP_004048602.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Gorilla gorilla
gorilla]
Length = 369
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 89 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 146
>gi|426362927|ref|XP_004048601.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Gorilla gorilla
gorilla]
Length = 384
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 89 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 146
>gi|426223096|ref|XP_004023228.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like
[Ovis aries]
Length = 370
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 85 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 142
>gi|334311509|ref|XP_001366137.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Monodelphis domestica]
Length = 394
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|410900520|ref|XP_003963744.1| PREDICTED: actin-binding LIM protein 1-like [Takifugu rubripes]
Length = 875
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 SPCPEE---KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNI 66
SP P++ S+C GCG+ I + LLA+DRQWHLGC +C C L E S+ G
Sbjct: 249 SPGPKDILGSSNCAGCGRDIKNGQALLALDRQWHLGCFKCKACSKVLTGEY--ISKDGAP 306
Query: 67 YCKQDF 72
YC++D+
Sbjct: 307 YCEKDY 312
>gi|395505734|ref|XP_003757194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Sarcophilus harrisii]
Length = 394
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|338720274|ref|XP_001916843.2| PREDICTED: LIM/homeobox protein Lhx6-like [Equus caballus]
Length = 239
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|51571915|ref|NP_001004015.1| LIM/homeobox protein Lhx6 [Danio rerio]
gi|50953777|gb|AAT90495.1| Lhx6 [Danio rerio]
gi|190336767|gb|AAI62225.1| LIM homeobox 6 [Danio rerio]
Length = 375
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L SC+ ++ I+CK D+F
Sbjct: 94 KNVCASCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYF 151
>gi|395505631|ref|XP_003757143.1| PREDICTED: LIM/homeobox protein Lhx6 [Sarcophilus harrisii]
Length = 363
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|348505840|ref|XP_003440468.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oreochromis
niloticus]
Length = 359
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECNQHLDETCTCFVRDGKTYCKRDYAR 83
>gi|334311511|ref|XP_003339631.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Monodelphis domestica]
Length = 401
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
vitripennis]
Length = 458
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 2 LKDRDDSSSPCPEEKSS--CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELS 58
+K +D+ P ++ S C GCG I D++ L +A D +WH CL+CA C L +
Sbjct: 28 VKIQDEPGDPMSQKSRSSLCVGCGGRIHDQWILRVAPDLEWHAACLKCAACQQFLDESCT 87
Query: 59 CFSRHGNIYCKQDFFR 74
CF R G YCK D+ R
Sbjct: 88 CFVRDGKTYCKDDYVR 103
>gi|62751505|ref|NP_001015822.1| LIM domain transcription factor LMO4.1 [Xenopus (Silurana)
tropicalis]
gi|82194932|sp|Q5FVB2.1|LMO41_XENTR RecName: Full=LIM domain transcription factor LMO4.1; AltName:
Full=LIM domain only protein 4.1; Short=LMO-4.1
gi|58475879|gb|AAH90104.1| LIM domain only 4 [Xenopus (Silurana) tropicalis]
Length = 167
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
+C GCG I DRF L +++R WH CL+C+ C L SC+++ G I C+ D+ R
Sbjct: 23 ACAGCGGKIADRFLLYSMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIR 80
>gi|348586684|ref|XP_003479098.1| PREDICTED: LIM domain transcription factor LMO4-like [Cavia
porcellus]
Length = 236
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 LKDRDDSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS- 55
+ + SS P P S C GCG I DRF L A+D WH CL+C+ C L
Sbjct: 1 MVNPGSSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDI 60
Query: 56 ELSCFSRHGNIYCKQDFFR 74
SC+++ G I C+ D+ R
Sbjct: 61 GTSCYTKSGMILCRNDYIR 79
>gi|395505738|ref|XP_003757196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Sarcophilus harrisii]
Length = 401
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|345321288|ref|XP_001521123.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Ornithorhynchus
anatinus]
Length = 347
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P K C CG I+D++ L D WH+ CL C+ C L SC+ + +I+CK D+
Sbjct: 60 PPAKCVCSSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY 119
Query: 73 FRYSQAR 79
FR R
Sbjct: 120 FRRYGTR 126
>gi|355753054|gb|EHH57100.1| hypothetical protein EGM_06670 [Macaca fascicularis]
Length = 363
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 67 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 124
>gi|395505736|ref|XP_003757195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Sarcophilus harrisii]
Length = 404
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|432861700|ref|XP_004069695.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oryzias
latipes]
Length = 358
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYAR 83
>gi|334311482|ref|XP_001364897.2| PREDICTED: LIM/homeobox protein Lhx6 [Monodelphis domestica]
Length = 391
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 95 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYF 152
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|449472133|ref|XP_002192003.2| PREDICTED: insulin gene enhancer protein ISL-2 [Taeniopygia
guttata]
Length = 271
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D F L ++ D +WH+ CL+CA C PL+ +CF R G YCKQ R
Sbjct: 73 CAGCGGRIQDPFLLRVSPDLEWHVACLKCAECGQPLNETCTCFLRDGKAYCKQITGR 129
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|345329744|ref|XP_001512364.2| PREDICTED: LIM/homeobox protein Lhx6 [Ornithorhynchus anatinus]
Length = 364
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L + SC+ ++ I+CK D+F
Sbjct: 68 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQSSCYIKNKEIFCKVDYF 125
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCXGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|340721611|ref|XP_003399211.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
gi|350404711|ref|XP_003487194.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 334
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF + +YC+ D+
Sbjct: 44 CGGCGERVRERTVLCVGGRTWHSRCLRCCACARPLHDQHSCFLKGMRLYCRHDY 97
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|393904553|gb|EJD73731.1| hypothetical protein LOAG_18862, partial [Loa loa]
Length = 114
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC I+DR+ +++ WH C+QCA C L +CF+R+G I C++DF R
Sbjct: 4 CAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSE--TCFTRNGLILCRKDFARRYGT 61
Query: 79 R 79
R
Sbjct: 62 R 62
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|281366134|ref|NP_648567.2| CG4328 [Drosophila melanogaster]
gi|211938623|gb|ACJ13208.1| FI06571p [Drosophila melanogaster]
gi|272455176|gb|AAF49932.2| CG4328 [Drosophila melanogaster]
Length = 544
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C C QPI DR+ + V+ +H GCL+C C LH SC++R G +YC+ D+ R
Sbjct: 197 SQCAHCCQPICDRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 252
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|444512970|gb|ELV10228.1| LIM domain transcription factor LMO4 [Tupaia chinensis]
Length = 105
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 6 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 65
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 66 TKSGMILCRNDYIR 79
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|312103264|ref|XP_003150115.1| homeobox protein Lim-1 [Loa loa]
Length = 90
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C GC I+DR+ +++ WH C+QCA C L +CF+R+G I C++DF R
Sbjct: 35 AICAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSE--TCFTRNGLILCRKDFAR 90
>gi|321477752|gb|EFX88710.1| hypothetical protein DAPPUDRAFT_6311 [Daphnia pulex]
Length = 126
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 18 SCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
+C GCG I++RF A+DR WH GCL+C+ C L +SC+++ G I C+ D+ R
Sbjct: 7 ACAGCGGKILERFLFHALDRFWHHGCLKCSCCGARLADIGVSCYTKAGMILCRADYVR 64
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +C R G YCK+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCLVRDGKTYCKRDYIR 73
>gi|410912158|ref|XP_003969557.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Takifugu
rubripes]
Length = 359
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|348500124|ref|XP_003437623.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oreochromis
niloticus]
Length = 360
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|301616969|ref|XP_002937919.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 393
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+ ++ C GC +PI DRF + + WH CLQC C PL + SC+ R ++CKQD+
Sbjct: 51 QHQAVCEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTT--SCYFRDRKLFCKQDY 107
>gi|326668246|ref|XP_685757.4| PREDICTED: LIM/homeobox protein Lhx6 [Danio rerio]
Length = 270
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC I DR+ L WHL CLQC+ C V L + SCF R+ I+C+ D+
Sbjct: 33 CTGCSTEIFDRYVLKVNGLTWHLRCLQCSVCAVSLGHQNSCFIRNKEIFCRTDY 86
>gi|158297426|ref|XP_555680.3| AGAP007839-PA [Anopheles gambiae str. PEST]
gi|157015189|gb|EAL39724.3| AGAP007839-PA [Anopheles gambiae str. PEST]
Length = 141
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
C GCG I +RF+L A+DR WH CL+C+ C L SC++R G I CK D+ R
Sbjct: 81 CAGCGGKITERFFLHALDRYWHNSCLKCSCCGAMLADIGSSCYTRSGMILCKADYSR 137
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|348513701|ref|XP_003444380.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 375
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L SC+ ++ I+CK D+F
Sbjct: 94 KNLCASCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHSSCYIKNKEIFCKMDYF 151
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDF 72
QD+
Sbjct: 105 QDY 107
>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
Length = 1751
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 14 EEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+ S C GCG I+D++ L ++ D +WH CL+C C L +CF R G YCK D+
Sbjct: 1313 KRSSICNGCGHEILDQYILRVSPDLEWHAACLKCVDCRQFLDETCTCFVRDGKPYCKLDY 1372
Query: 73 FRYSQAR 79
R R
Sbjct: 1373 VRLFGVR 1379
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 52 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 103
>gi|301616967|ref|XP_002937918.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 400
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+ ++ C GC +PI DRF + + WH CLQC C PL + SC+ R ++CKQD+
Sbjct: 51 QHQAVCEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTT--SCYFRDRKLFCKQDY 107
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 44 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 100
Query: 70 QDF 72
QD+
Sbjct: 101 QDY 103
>gi|284795255|ref|NP_001087890.2| LIM domain only 4, gene 1 [Xenopus laevis]
Length = 165
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 2 LKDRDDSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS- 55
+ + SS P P S+ C GCG I DRF L A+D WH CL+C+ C L
Sbjct: 1 MVNPGSSSQPPPVTASTLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEI 60
Query: 56 ELSCFSRHGNIYCKQDFFR 74
SC+++ G I C+ D+ R
Sbjct: 61 GTSCYTKSGMILCRNDYIR 79
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 277 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 328
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 14 EEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+ ++ C GC +PI DRF + + WH CLQC C PL + SC+ R ++CKQD+
Sbjct: 51 QHQAVCEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTT--SCYFRDRKLFCKQDY 107
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 23 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 79
Query: 70 QDF 72
QD+
Sbjct: 80 QDY 82
>gi|432906454|ref|XP_004077540.1| PREDICTED: actin-binding LIM protein 1-like [Oryzias latipes]
Length = 676
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 SPCPEE---KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNI 66
SP P++ S+C GCG+ I + LLA+DRQWHLGC +C C L E S+ G
Sbjct: 141 SPGPKDIPGSSNCAGCGRDIKNGQALLALDRQWHLGCFKCKACSKVLTGEY--ISKDGAP 198
Query: 67 YCKQDF 72
YC++D+
Sbjct: 199 YCEKDY 204
>gi|52345752|ref|NP_001004922.1| LIM domain transcription factor LMO4.2 [Xenopus (Silurana)
tropicalis]
gi|82183496|sp|Q6DJ06.1|LMO42_XENTR RecName: Full=LIM domain transcription factor LMO4.2; AltName:
Full=LIM domain only protein 4.2; Short=LMO-4.2
gi|49522594|gb|AAH75379.1| MGC89099 protein [Xenopus (Silurana) tropicalis]
gi|89268694|emb|CAJ82708.1| LIM domain only 4 [Xenopus (Silurana) tropicalis]
Length = 165
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 2 LKDRDDSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS- 55
+ + SS P P S+ C GCG I DRF L A+D WH CL+C+ C L
Sbjct: 1 MVNPGSSSQPPPVTASTLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEI 60
Query: 56 ELSCFSRHGNIYCKQDFFR 74
SC+++ G I C+ D+ R
Sbjct: 61 GTSCYTKSGMILCRNDYIR 79
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 141 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 192
>gi|2497672|sp|Q60564.1|LMX1B_MESAU RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|1432087|gb|AAB62320.1| LIM-homeodomain protein [Mesocricetus auratus]
Length = 369
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 15 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 71
Query: 70 QDF 72
QD+
Sbjct: 72 QDY 74
>gi|1708558|sp|P50212.1|ISL2B_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2B;
Short=Islet-2B
gi|64209|emb|CAA46102.1| isl-1 [Oncorhynchus tshawytscha]
gi|1094403|prf||2106150A LIM domain homeobox protein
Length = 340
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L +A D +WH CL+C+ C L +CF R G YCK+D+ R
Sbjct: 9 CVGCGSQIHDQYILRVAPDLEWHAACLKCSECSQYLDETCTCFVRDGKTYCKRDYVR 65
>gi|383857877|ref|XP_003704430.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 371
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
CGGCG+ + +R L R WH CL+C C PLH + SCF + +YC+ D+
Sbjct: 82 CGGCGERVRERTVLCVGGRTWHSRCLRCFACARPLHDQHSCFLKGMRLYCRHDY 135
>gi|145587040|gb|ABP87885.1| IP01439p [Drosophila melanogaster]
Length = 467
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C C QPI DR+ + V+ +H GCL+C C LH SC++R G +YC+ D+ R
Sbjct: 120 SQCAHCCQPICDRYIMRVVENSFHEGCLKCTACS--LHLVHSCYAREGKLYCRVDYER 175
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|351705454|gb|EHB08373.1| LIM domain transcription factor LMO4 [Heterocephalus glaber]
Length = 214
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 LKDRDDSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS- 55
+ + SS P P S C GCG I DRF L A+D WH CL+C+ C L
Sbjct: 32 MVNPGSSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDI 91
Query: 56 ELSCFSRHGNIYCKQDFFR 74
SC+++ G I C+ D+ R
Sbjct: 92 GTSCYTKSGMILCRNDYIR 110
>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
Length = 363
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|156549266|ref|XP_001599629.1| PREDICTED: lipoma-preferred partner homolog [Nasonia vitripennis]
Length = 281
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSEL--SCFSRHGNIYCKQDFFR 74
C GCG I+DR+ L A++R WH CL+C C L +E+ SC+S+ I CK D+ R
Sbjct: 132 CAGCGNRIVDRWLLFALERYWHNNCLKCTTCGTAL-AEIGQSCYSKGNMILCKNDYTR 188
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|348507106|ref|XP_003441098.1| PREDICTED: actin-binding LIM protein 1 isoform 2 [Oreochromis
niloticus]
Length = 706
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 10 SPCPEE---KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNI 66
SP P++ S+C GCG+ I + LLA+D+QWHLGC +C C+ L E S+ G
Sbjct: 141 SPGPKDILGSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKACNKVLTGEY--ISKDGAP 198
Query: 67 YCKQDF 72
YC++D+
Sbjct: 199 YCEKDY 204
>gi|345326124|ref|XP_001508297.2| PREDICTED: hypothetical protein LOC100077000 [Ornithorhynchus
anatinus]
Length = 553
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF L + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 209 CEGCQRPISDRFLLRVNEASWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 260
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|149026131|gb|EDL82374.1| LIM domain only 4, isoform CRA_b [Rattus norvegicus]
gi|149026132|gb|EDL82375.1| LIM domain only 4, isoform CRA_b [Rattus norvegicus]
Length = 81
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 6 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 65
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 66 TKSGMILCRNDYIR 79
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 84
>gi|308220074|gb|ADO22609.1| LIM class homeobox transcription factor Lhx1.5 [Mnemiopsis
leidyi]
Length = 288
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYS 76
S C GC I D+F + +D+ WH CL C C V L + CF+R+G YC +DF + S
Sbjct: 3 SFCAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQ--CFTRNGKFYCSKDFEK-S 59
Query: 77 QA 78
QA
Sbjct: 60 QA 61
>gi|18858907|ref|NP_571045.1| insulin gene enhancer protein isl-2a [Danio rerio]
gi|1708561|sp|P53406.1|ISL2A_DANRE RecName: Full=Insulin gene enhancer protein isl-2a;
Short=Islet-2A; AltName: Full=Insulin gene enhancer
protein isl-2; Short=Islet-2
gi|871001|emb|CAA61283.1| Islet-2 protein [Danio rerio]
gi|1037166|dbj|BAA07484.1| zfIsl-2 [Danio rerio]
gi|190336908|gb|AAI62631.1| Islet2a [Danio rerio]
gi|190339440|gb|AAI62833.1| Islet2a [Danio rerio]
Length = 359
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|354507122|ref|XP_003515607.1| PREDICTED: LIM domain transcription factor LMO4-like [Cricetulus
griseus]
gi|344245958|gb|EGW02062.1| LIM domain transcription factor LMO4 [Cricetulus griseus]
Length = 79
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 6 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 65
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 66 TKSGMILCRNDYIR 79
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 14 EEKSSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
E S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+
Sbjct: 2 ERLSLCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 61
Query: 73 FR 74
R
Sbjct: 62 VR 63
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 292 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 343
>gi|356577835|ref|XP_003557027.1| PREDICTED: insulin gene enhancer protein isl-1-like, partial
[Glycine max]
Length = 289
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 5 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 63
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|237512911|dbj|BAA07578.2| LIM homeodomain protein Hr-Lhx3 a-form [Halocynthia roretzi]
Length = 690
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GC I DRF L D+ WH CL+C C L + CFSR ++CK DFF+
Sbjct: 282 CTGCEHRIFDRFILKVQDKPWHSQCLKCNDCSAQLSEK--CFSRGNLVFCKDDFFK 335
>gi|335310321|ref|XP_003361978.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3,
partial [Sus scrofa]
Length = 194
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC Q I+ R WH CL+C+ CH PL CFSR ++YCK DFF+
Sbjct: 14 CAGCDQHILXXXXXXXXXRHWHSKCLKCSDCHTPLAER--CFSRGESLYCKDDFFKLGYF 71
Query: 79 R 79
R
Sbjct: 72 R 72
>gi|301623765|ref|XP_002941184.1| PREDICTED: LIM/homeobox protein Lhx6-like [Xenopus (Silurana)
tropicalis]
Length = 389
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFF 73
K+ C CG I+DR+ L + WH+ CL+C+ C L SC+ ++ I+CK D+F
Sbjct: 93 KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHNSCYIKNKEIFCKMDYF 150
>gi|402897927|ref|XP_003911988.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Papio anubis]
Length = 406
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 48 SDCPH-PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCK 104
Query: 70 QDFFRYSQAR 79
QD+ + A+
Sbjct: 105 QDYQQLFAAK 114
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 60 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 118
>gi|371573884|gb|AEX38312.1| Lhx1 [Mnemiopsis leidyi]
Length = 424
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYS 76
S C GC I D+F + +D+ WH CL C C V L + CF+R+G YC +DF + S
Sbjct: 3 SFCAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQ--CFTRNGKFYCSKDFEK-S 59
Query: 77 QA 78
QA
Sbjct: 60 QA 61
>gi|47216678|emb|CAG05175.1| unnamed protein product [Tetraodon nigroviridis]
Length = 571
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 SPCPEE---KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNI 66
SP P++ S+C GCG+ I + LLA+DRQWHLGC +C C L E S+ G
Sbjct: 134 SPGPKDVLGSSNCAGCGRDIKNGQALLALDRQWHLGCFKCKACSKVLTGEY--ISKDGAP 191
Query: 67 YCKQDF 72
YC++D+
Sbjct: 192 YCERDY 197
>gi|431897053|gb|ELK06317.1| LIM domain transcription factor LMO4 [Pteropus alecto]
Length = 214
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 6 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 65
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 66 TKSGMILCRNDYIR 79
>gi|270002859|gb|EEZ99306.1| LIM homeobox transcription factor 1, beta [Tribolium castaneum]
Length = 388
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DR+ + D WH CL C+ C V L SC++R+ +YCK D
Sbjct: 37 CEKTYEMCEGCGQKIHDRYLMRVADASWHEHCLTCSICGVQLAH--SCYTRNTKLYCKAD 94
Query: 72 FFR 74
+ R
Sbjct: 95 YDR 97
>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
Length = 539
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 50 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 108
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 433 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 484
>gi|70887599|ref|NP_001020669.1| LIM homeobox transcription factor 1, alpha [Danio rerio]
Length = 366
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 16 KSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
KS C GC + I DR+ L D WH CL CA C PL +CF R+ +YCK+D+
Sbjct: 23 KSVCEGCNELIRDRYLLRVQDGLWHERCLHCASCREPLKD--TCFLRNKTLYCKRDY 77
>gi|334321736|ref|XP_001364235.2| PREDICTED: LIM domain transcription factor LMO4-like [Monodelphis
domestica]
Length = 225
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
C GCG I DRF L A+D WH CL+C+ C L SC+++ G I C+ D+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR 79
>gi|432107070|gb|ELK32502.1| LIM domain transcription factor LMO4 [Myotis davidii]
Length = 198
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 8 SSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFS 61
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC++
Sbjct: 7 SSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYT 66
Query: 62 RHGNIYCKQDFFR 74
+ G I C+ D+ R
Sbjct: 67 KSGMILCRNDYIR 79
>gi|156405705|ref|XP_001640872.1| predicted protein [Nematostella vectensis]
gi|156228008|gb|EDO48809.1| predicted protein [Nematostella vectensis]
Length = 155
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGN-IYCKQD 71
P K +CGGCG I +RF L A+DR WH CL+C+ C L S N I CK+D
Sbjct: 14 PASKRTCGGCGVLINERFLLKALDRYWHEDCLKCSCCECRLGEVGSTLYTKANLILCKRD 73
Query: 72 FFRYSQARYPDLPIPKTLVSF 92
+ R R KT+ +F
Sbjct: 74 YLRLFGTRGFCSVCCKTIPAF 94
>gi|268578911|ref|XP_002644438.1| C. briggsae CBR-LIM-4 protein [Caenorhabditis briggsae]
Length = 346
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C C QPI D+FYL R WH CLQC C L ++ CF + YCK+ +FR
Sbjct: 100 CAQCQQPIQDKFYLSVDGRSWHESCLQCTECKCRLSNK--CFYKDSEFYCKECYFR 153
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 54 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 112
>gi|28195590|gb|AAO23658.1| LMX1 [Gallus gallus]
Length = 85
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 10 SPCPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCK 69
S CP + + C GC +PI DRF + + WH CLQCA C L + SC+ R +YCK
Sbjct: 25 SECPHQ-AVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTT--SCYFRDRKLYCK 81
Query: 70 QDF 72
QD+
Sbjct: 82 QDY 84
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 52 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 52 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
Length = 550
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 52 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|440912098|gb|ELR61697.1| LIM domain transcription factor LMO4, partial [Bos grunniens
mutus]
Length = 165
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 7 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 66
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 67 TKSGMILCRNDYIR 80
>gi|417396903|gb|JAA45485.1| Putative lim domain transcription factor lmo4 [Desmodus rotundus]
Length = 197
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCFSRHGNIYCKQDFFR 74
C GCG I DRF L A+D WH CL+C+ C L SC+++ G I C+ D+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR 79
>gi|395541258|ref|XP_003772563.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 365
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 13 PEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
P K C GC I+D++ L D WH+ CL C+ C L +CF + I+CK D+
Sbjct: 79 PRVKCVCSGCRLEILDKYLLKVNDMYWHMQCLCCSVCQTSLGKHATCFIKDNTIFCKIDY 138
Query: 73 FR 74
R
Sbjct: 139 LR 140
>gi|326205389|dbj|BAJ84073.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
Length = 189
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
+ C GCG I D+F L ++ D +WH CL+CA C L +CF R G YCK+D+ R
Sbjct: 25 AMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|327270759|ref|XP_003220156.1| PREDICTED: LIM domain transcription factor LMO4-like [Anolis
carolinensis]
gi|387019075|gb|AFJ51655.1| LIM domain transcription factor LMO4-like [Crotalus adamanteus]
Length = 165
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 LKDRDDSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS- 55
+ + SS P P S C GCG I DRF L A+D WH CL+C+ C L
Sbjct: 1 MVNPGSSSQPPPVTSGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEI 60
Query: 56 ELSCFSRHGNIYCKQDFFR 74
SC+++ G I C+ D+ R
Sbjct: 61 GTSCYTKSGMILCRNDYIR 79
>gi|123995901|gb|ABM85552.1| LIM domain only 4 [synthetic construct]
Length = 165
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 6 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 65
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 66 TKSGMILCRNDYIR 79
>gi|355558146|gb|EHH14926.1| hypothetical protein EGK_00938, partial [Macaca mulatta]
gi|355745433|gb|EHH50058.1| hypothetical protein EGM_00823, partial [Macaca fascicularis]
Length = 165
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 6 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 65
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 66 TKSGMILCRNDYIR 79
>gi|158258593|dbj|BAF85267.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 2 LKDRDDSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS- 55
+ + SS P P S C GCG I DRF L A+D WH CL+C+ C L
Sbjct: 1 MVNPGSSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDI 60
Query: 56 ELSCFSRHGNIYCKQDFFR 74
SC+++ G I C+ D+ R
Sbjct: 61 GTSCYTKSGMILCRNDYIR 79
>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
Length = 534
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 52 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
Length = 534
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 52 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L ++ D +WH CL+CA C+ L +CF R G Y K+D+ R
Sbjct: 15 SLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYSKRDYIR 73
>gi|281338511|gb|EFB14095.1| hypothetical protein PANDA_006061 [Ailuropoda melanoleuca]
Length = 164
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 6 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 65
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 66 TKSGMILCRNDYIR 79
>gi|426223032|ref|XP_004005683.1| PREDICTED: LIM homeobox transcription factor 1-beta [Ovis aries]
Length = 405
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 17 SSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDF 72
+ C GC +PI DRF + + WH CLQCA C L + SC+ R +YCKQD+
Sbjct: 54 AGCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTT--SCYFRDRKLYCKQDY 107
>gi|195126146|ref|XP_002007535.1| GI13003 [Drosophila mojavensis]
gi|193919144|gb|EDW18011.1| GI13003 [Drosophila mojavensis]
Length = 607
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DR+ + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 237 CEKNYELCEGCGQKIHDRYLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKLD 294
Query: 72 FFR 74
+ R
Sbjct: 295 YDR 297
>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b;
Short=Islet-2B; AltName: Full=Insulin gene enhancer
protein isl-3; Short=Islet-3
gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
Length = 358
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 19 CGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
C GCG I D++ L ++ D +WH CL+C C+ L +CF R G YCK+D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDYVR 83
>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
Length = 534
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 17 SSCGGCGQPIIDRFYL-LAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFR 74
S C GCG I D++ L +A D +WH CL+C C L +CF R G YCK+D+ R
Sbjct: 52 SHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
>gi|402591685|gb|EJW85614.1| hypothetical protein WUBG_03477, partial [Wuchereria bancrofti]
Length = 103
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 19 CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQDFFRYSQA 78
C GC I+DR+ +++ WH C+QCA C L SE +CF+R G I C++DF R
Sbjct: 4 CAGCNNAILDRYVFHVLEKAWHASCIQCADCK-ELLSE-TCFTRDGLILCRKDFARRYGT 61
Query: 79 R 79
R
Sbjct: 62 R 62
>gi|195376257|ref|XP_002046913.1| GJ13148 [Drosophila virilis]
gi|194154071|gb|EDW69255.1| GJ13148 [Drosophila virilis]
Length = 588
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 12 CPEEKSSCGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHSELSCFSRHGNIYCKQD 71
C + C GCGQ I DR+ + D WH CL C +C + LH +C+ R+ +YCK D
Sbjct: 217 CEKNYELCEGCGQKIHDRYLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKLD 274
Query: 72 FFR 74
+ R
Sbjct: 275 YDR 277
>gi|355699533|gb|AES01159.1| LIM domain only 4 [Mustela putorius furo]
Length = 163
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 7 DSSSPCPEEKSS-----CGGCGQPIIDRFYLLAVDRQWHLGCLQCAHCHVPLHS-ELSCF 60
SS P P S C GCG I DRF L A+D WH CL+C+ C L SC+
Sbjct: 5 SSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCY 64
Query: 61 SRHGNIYCKQDFFR 74
++ G I C+ D+ R
Sbjct: 65 TKSGMILCRNDYIR 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.140 0.473
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,867,568,227
Number of Sequences: 23463169
Number of extensions: 71456845
Number of successful extensions: 177705
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2137
Number of HSP's successfully gapped in prelim test: 2002
Number of HSP's that attempted gapping in prelim test: 171610
Number of HSP's gapped (non-prelim): 6868
length of query: 107
length of database: 8,064,228,071
effective HSP length: 75
effective length of query: 32
effective length of database: 6,304,490,396
effective search space: 201743692672
effective search space used: 201743692672
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 69 (31.2 bits)