RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4351
(62 letters)
>d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens),
T-cell [TaxId: 9606]}
Length = 273
Score = 50.2 bits (119), Expect = 6e-10
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 46
++++++++LL MR YRMGLIQTPDQLRFSY AIIEG
Sbjct: 236 DDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGA 272
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo
sapiens), shp-2 [TaxId: 9606]}
Length = 307
Score = 49.1 bits (116), Expect = 2e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 7 GEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 48
G ++ V + + +R R G++QT Q R Y A+ I T
Sbjct: 265 GVDCDIDVPKTIQMVRSQRSGMVQTEAQYRSIYMAVQHYIET 306
>d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens),
shp-1 [TaxId: 9606]}
Length = 284
Score = 48.3 bits (114), Expect = 3e-09
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 7 GEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 48
G ++ +Q+ + +R R G++QT Q +F Y AI + I T
Sbjct: 235 GLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIET 276
>d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens)
[TaxId: 9606]}
Length = 249
Score = 47.9 bits (113), Expect = 4e-09
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 48
V + + + +R R ++QT DQ + Y+A +E + +
Sbjct: 210 GVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGS 248
>d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens)
[TaxId: 9606]}
Length = 317
Score = 47.5 bits (112), Expect = 7e-09
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHT 48
V + + MR R ++QT DQ F ++A++E
Sbjct: 240 KTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATC 278
>d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo
sapiens), 1B [TaxId: 9606]}
Length = 297
Score = 47.1 bits (111), Expect = 8e-09
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 7 GEINNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIH 47
+ ++V ++++LLEMR +RMGLIQT DQLRFSY A+IEG
Sbjct: 238 KDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAK 278
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 288
Score = 47.1 bits (111), Expect = 1e-08
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 44
V V + +R R ++QT Q F YQA++E
Sbjct: 250 RKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLE 284
>d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 245
Score = 46.7 bits (110), Expect = 1e-08
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIH 47
+ V + + +R R ++QT +Q F Y+ + E I
Sbjct: 207 GILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQEYID 244
>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens),
mu [TaxId: 9606]}
Length = 278
Score = 46.7 bits (110), Expect = 1e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 46
V + + E+R R+ ++QT +Q F + AI+E
Sbjct: 241 GVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEAC 277
>d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus),
ptp-sl/br7 [TaxId: 10090]}
Length = 297
Score = 46.4 bits (109), Expect = 1e-08
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIE 44
V I+ ++R R G++QT +Q F + A+
Sbjct: 253 GVVDALSIVCQLRVDRGGMVQTSEQYEFVHHALCL 287
>d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor
type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 308
Score = 45.6 bits (107), Expect = 3e-08
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGI 46
+ + +++ MR R G++QT DQ F YQ I+ +
Sbjct: 263 LDFDISDLVRCMRLQRHGMVQTEDQYIFCYQVILYVL 299
>d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic
domain {Salmonella typhimurium [TaxId: 90371]}
Length = 243
Score = 43.1 bits (101), Expect = 2e-07
Identities = 3/36 (8%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 10 NNVSVQEILLEMRHYRMG-LIQTPDQLRFSYQAIIE 44
+ +++++ + R R +++ Q +
Sbjct: 205 PHSNLEQVRADFRDSRNNRMLEDASQFVQLKAMQAQ 240
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 41.7 bits (97), Expect = 8e-07
Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 10 NNVSVQEILLEMRHYRMG-LIQTPDQLRFSYQAIIE 44
+ +SV++++ +MR R G ++Q +QL +
Sbjct: 240 SQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEG 275
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 31.5 bits (71), Expect = 0.003
Identities = 5/31 (16%), Positives = 10/31 (32%)
Query: 7 GEINNVSVQEILLEMRHYRMGLIQTPDQLRF 37
+ + E+R + P Q R+
Sbjct: 131 KFLKAQEALDFYGEVRTRDKKGVTIPSQRRY 161
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 30.4 bits (68), Expect = 0.006
Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 10 NNVSVQEILLEMRHYRM-GLIQTPDQLRFSYQ 40
+ +S ++ + +R R G IQT Q + ++
Sbjct: 136 DTISPEQAIDSLRDLRGSGAIQTIKQYNYLHE 167
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 27.7 bits (61), Expect = 0.068
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 10 NNVSVQEILLEMRHYRMGLIQTPDQ 34
++ E + +R R G + P Q
Sbjct: 135 YRMTAAETIAWVRICRPGSVIGPQQ 159
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 27.0 bits (59), Expect = 0.11
Identities = 5/27 (18%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 11 NVSVQEILLEMRHYRMGLIQTPDQLRF 37
+ ++ + +R R G + QL +
Sbjct: 115 GMKYEDAVQFIRQKRRGAFNSK-QLLY 140
>d1t6aa_ d.129.8.1 (A:) Rbstp2229 protein {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 124
Score = 23.6 bits (51), Expect = 1.5
Identities = 7/29 (24%), Positives = 20/29 (68%)
Query: 12 VSVQEILLEMRHYRMGLIQTPDQLRFSYQ 40
++++++ + Y+M L +T +QL ++Y+
Sbjct: 14 MTIEDVKQLLERYQMALKKTGEQLGWAYE 42
>d1iv8a1 b.71.1.1 (A:654-720) Maltooligosyl trehalose synthase
{Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Length = 67
Score = 21.9 bits (46), Expect = 5.5
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 28 LIQTPDQLRFSYQAIIEGIHTDWETDDEL 56
+I+T + + + I+TD T +E+
Sbjct: 23 IIKTKGSVNYKLKLEEGAIYTDVLTGEEI 51
>d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein]
desaturase {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 267
Score = 21.7 bits (46), Expect = 7.8
Identities = 3/41 (7%), Positives = 6/41 (14%)
Query: 14 VQEILLEMRHYRMGLIQTPDQLRFSYQAIIEGIHTDWETDD 54
+ I + GI +
Sbjct: 205 IAAIAARAADLDVLGADIEAYRDKLQNVADAGIFGKPQLRQ 245
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.406
Gapped
Lambda K H
0.267 0.0471 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 249,517
Number of extensions: 9073
Number of successful extensions: 51
Number of sequences better than 10.0: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 21
Length of query: 62
Length of database: 2,407,596
Length adjustment: 32
Effective length of query: 30
Effective length of database: 1,968,236
Effective search space: 59047080
Effective search space used: 59047080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.5 bits)