BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4355
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q25190|5HTR_HELVI 5-hydroxytryptamine receptor OS=Heliothis virescens PE=2 SV=1
Length = 466
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/46 (82%), Positives = 45/46 (97%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELN 64
NVFVIAAI++E+NLQ+VANYL+ SLAVADLMVACLVMPLGAVYE++
Sbjct: 80 NVFVIAAIIIERNLQNVANYLVASLAVADLMVACLVMPLGAVYEVS 125
>sp|P28285|5HT2A_DROME 5-hydroxytryptamine receptor 2A OS=Drosophila melanogaster
GN=5-HT1A PE=2 SV=2
Length = 834
Score = 81.3 bits (199), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/46 (82%), Positives = 44/46 (95%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELN 64
NVFVIAAI+LE+NLQ+VANYL+ SLAVADL VACLVMPLGAVYE++
Sbjct: 244 NVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEIS 289
>sp|P28286|5HT2B_DROME 5-hydroxytryptamine receptor 2B OS=Drosophila melanogaster
GN=5-HT1B PE=2 SV=3
Length = 617
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/46 (82%), Positives = 44/46 (95%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELN 64
NVFVIAAI+LE+NLQ+VANYL+ SLAVADL VACLVMPLGAVYE++
Sbjct: 108 NVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEIS 153
>sp|Q17239|5HTR_BOMMO 5-hydroxytryptamine receptor OS=Bombyx mori PE=2 SV=1
Length = 446
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 43/45 (95%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
NVFVIAAILLE++L+S AN LI+SLAVADL+VACLVMPLGAVYE+
Sbjct: 79 NVFVIAAILLERHLRSAANNLILSLAVADLLVACLVMPLGAVYEV 123
>sp|Q25414|5HTR_LYMST 5-hydroxytryptamine receptor OS=Lymnaea stagnalis PE=2 SV=1
Length = 509
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAKCF 68
N FVIAA++LE++L +VANYLI+SLAVADLMVA LVMPL V E++ F
Sbjct: 113 NCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLVMPLSVVSEISKVWF 162
>sp|Q6XXY0|5HT1A_VULVU 5-hydroxytryptamine receptor 1A OS=Vulpes vulpes GN=HTR1A PE=3
SV=1
Length = 423
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|Q6XXX9|5HT1A_CANFA 5-hydroxytryptamine receptor 1A OS=Canis familiaris GN=HTR1A PE=3
SV=1
Length = 423
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|O42384|5H1AB_TAKRU 5-hydroxytryptamine receptor 1A-beta OS=Takifugu rubripes
GN=htr1a-B PE=3 SV=1
Length = 416
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 39/47 (82%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
+ N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 49 FGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 95
>sp|Q9N296|5HT1A_PONPY 5-hydroxytryptamine receptor 1A OS=Pongo pygmaeus GN=HTR1A PE=3
SV=1
Length = 422
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|Q9N297|5HT1A_GORGO 5-hydroxytryptamine receptor 1A OS=Gorilla gorilla gorilla
GN=HTR1A PE=3 SV=1
Length = 422
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|Q9N298|5HT1A_PANTR 5-hydroxytryptamine receptor 1A OS=Pan troglodytes GN=HTR1A PE=3
SV=1
Length = 422
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|P08908|5HT1A_HUMAN 5-hydroxytryptamine receptor 1A OS=Homo sapiens GN=HTR1A PE=1
SV=3
Length = 422
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|P19327|5HT1A_RAT 5-hydroxytryptamine receptor 1A OS=Rattus norvegicus GN=Htr1a
PE=3 SV=1
Length = 422
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|Q0EAB6|5HT1A_HORSE 5-hydroxytryptamine receptor 1A OS=Equus caballus GN=HTR1A PE=2
SV=1
Length = 422
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|Q64264|5HT1A_MOUSE 5-hydroxytryptamine receptor 1A OS=Mus musculus GN=Htr1a PE=2
SV=2
Length = 421
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 54 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 98
>sp|O42385|5H1AA_TAKRU 5-hydroxytryptamine receptor 1A-alpha OS=Takifugu rubripes
GN=htr1aa PE=3 SV=1
Length = 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 39/47 (82%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
+ N V+AAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A+Y++
Sbjct: 61 FGNSCVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQV 107
>sp|Q98998|5HT1A_XENLA 5-hydroxytryptamine receptor 1A OS=Xenopus laevis GN=htr1a PE=2
SV=1
Length = 408
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGA 59
+ N VIAAI LE++LQ+VANYLI SLAV DLMV+ LV+P+ A
Sbjct: 46 FGNACVIAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAA 88
>sp|P61168|DRD2_MOUSE D(2) dopamine receptor OS=Mus musculus GN=Drd2 PE=2 SV=2
Length = 444
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 10/61 (16%)
Query: 6 PDIPNYKLY----------FNYRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVM 55
PD P+Y Y + NV V A+ EK LQ+ NYLIVSLAVADL+VA LVM
Sbjct: 29 PDRPHYNYYAMLLTLLIFIIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVM 88
Query: 56 P 56
P
Sbjct: 89 P 89
>sp|Q61H86|DOPR3_CAEBR Dopamine receptor 3 OS=Caenorhabditis briggsae GN=dop-3 PE=3 SV=2
Length = 604
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNA 65
+ NV VI ++ E+NLQ+V N LIVSLAV+DL VA VM G YE N
Sbjct: 37 FGNVLVILSVYRERNLQTVTNMLIVSLAVSDLFVAIGVMSFGVYYEWNG 85
>sp|O73810|DRD2_MELGA D(2) dopamine receptor OS=Meleagris gallopavo GN=DRD2 PE=2 SV=1
Length = 436
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 2 ESSGPDIPNYKLY----------FNYRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVA 51
ESS P Y Y + NV V A+ EK LQ+ NYLIVSLAVADL+VA
Sbjct: 22 ESSADQKPQYNYYAVLLTLLIFVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVA 81
Query: 52 CLVMP 56
LVMP
Sbjct: 82 TLVMP 86
>sp|Q6RYS9|DOPR3_CAEEL Dopamine receptor 3 OS=Caenorhabditis elegans GN=dop-3 PE=1 SV=1
Length = 607
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELN 64
+ NV VI ++ E++LQ+V N LIVSLAV+D MVA VM G YE N
Sbjct: 37 FGNVLVIMSVFRERSLQTVTNMLIVSLAVSDFMVAIGVMSFGVYYEWN 84
>sp|P24628|DRD2A_XENLA D(2) dopamine receptor A OS=Xenopus laevis GN=drd2-a PE=2 SV=1
Length = 442
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYEL 63
+ NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP E+
Sbjct: 44 FGNVLVCIAVSREKALQTTTNYLIVSLAVADLLVATLVMPWAVYMEV 90
>sp|P19020|DRD3_RAT D(3) dopamine receptor OS=Rattus norvegicus GN=Drd3 PE=1 SV=1
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
+ N V AA+L E+ LQ+ NYL+VSLAVADL+VA LVMP
Sbjct: 45 FGNGLVCAAVLRERALQTTTNYLVVSLAVADLLVATLVMP 84
>sp|P30728|DRD3_MOUSE D(3) dopamine receptor OS=Mus musculus GN=Drd3 PE=2 SV=1
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
+ N V AA+L E+ LQ+ NYL+VSLAVADL+VA LVMP
Sbjct: 45 FGNGLVCAAVLRERALQTTTNYLVVSLAVADLLVATLVMP 84
>sp|Q8IS44|DRD2L_DROME Dopamine D2-like receptor OS=Drosophila melanogaster GN=D2R PE=2
SV=1
Length = 506
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNA 65
+ N+ VI ++ E++LQ+V NY IVSLA+ADL+VA +VMP + +N
Sbjct: 92 FGNILVILSVCRERSLQTVTNYFIVSLAIADLLVAVVVMPFAVYFLVNG 140
>sp|P60026|DRD2_PANTR D(2) dopamine receptor OS=Pan troglodytes GN=DRD2 PE=2 SV=1
Length = 443
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Query: 7 DIPNYKLYFN----------YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
D P+Y Y + NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 30 DRPHYNYYATLLTLLIAVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 89
>sp|P14416|DRD2_HUMAN D(2) dopamine receptor OS=Homo sapiens GN=DRD2 PE=1 SV=2
Length = 443
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Query: 7 DIPNYKLYFN----------YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
D P+Y Y + NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 30 DRPHYNYYATLLTLLIAVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 89
>sp|P52702|DRD2_CHLAE D(2) dopamine receptor OS=Chlorocebus aethiops GN=DRD2 PE=2 SV=1
Length = 443
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Query: 7 DIPNYKLYFN----------YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
D P+Y Y + NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 30 DRPHYNYYATLLTLLIAVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 89
>sp|P53453|DRD2L_TAKRU D(2)-like dopamine receptor OS=Takifugu rubripes GN=d215 PE=3
SV=1
Length = 463
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
+ NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 48 FGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 87
>sp|Q9GJU1|DRD2_CANFA D(2) dopamine receptor OS=Canis familiaris GN=DRD2 PE=2 SV=1
Length = 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
+ NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 50 FGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 89
>sp|Q588Y6|5HT1B_FELCA 5-hydroxytryptamine receptor 1B OS=Felis catus GN=HTR1B PE=2 SV=1
Length = 389
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 11 YKLYFNYRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
+ L N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 58 FTLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 113
>sp|P56496|5HT1B_SPAEH 5-hydroxytryptamine receptor 1B OS=Spalax ehrenbergi GN=HTR1B PE=3
SV=1
Length = 386
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 63 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 110
>sp|P61169|DRD2_RAT D(2) dopamine receptor OS=Rattus norvegicus GN=Drd2 PE=1 SV=1
Length = 444
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
+ NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 50 FGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 89
>sp|Q6TLI9|DRD2_MUSPF D(2) dopamine receptor OS=Mustela putorius furo GN=DRD2 PE=2 SV=1
Length = 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
+ NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 50 FGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 89
>sp|P20288|DRD2_BOVIN D(2) dopamine receptor OS=Bos taurus GN=DRD2 PE=2 SV=1
Length = 444
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 17 YRNVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMP 56
+ NV V A+ EK LQ+ NYLIVSLAVADL+VA LVMP
Sbjct: 50 FGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMP 89
>sp|P30939|5HT1F_HUMAN 5-hydroxytryptamine receptor 1F OS=Homo sapiens GN=HTR1F PE=2
SV=1
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVY 61
N VIAAI++ + L ANYLI SLAV D +VA LVMP VY
Sbjct: 41 NSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVY 83
>sp|P79250|5HT1B_CANFA 5-hydroxytryptamine receptor 1B OS=Canis familiaris GN=HTR1B PE=2
SV=2
Length = 389
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 66 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 113
>sp|Q9N2D9|5HT1F_PANTR 5-hydroxytryptamine receptor 1F (Fragment) OS=Pan troglodytes
GN=HTR1F PE=3 SV=1
Length = 365
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVY 61
N VIAAI++ + L ANYLI SLAV D +VA LVMP VY
Sbjct: 41 NSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVY 83
>sp|Q6XXX8|5HT1B_VULVU 5-hydroxytryptamine receptor 1B OS=Vulpes vulpes GN=HTR1B PE=3 SV=1
Length = 389
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 66 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYAVTGR 113
>sp|P28564|5HT1B_RAT 5-hydroxytryptamine receptor 1B OS=Rattus norvegicus GN=Htr1b PE=2
SV=1
Length = 386
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 63 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 110
>sp|P35404|5HT1B_DIDVI 5-hydroxytryptamine receptor 1B OS=Didelphis virginiana GN=HTR1B
PE=2 SV=1
Length = 388
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 66 NAFVIATVSRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 113
>sp|P28334|5HT1B_MOUSE 5-hydroxytryptamine receptor 1B OS=Mus musculus GN=Htr1b PE=2 SV=1
Length = 386
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 63 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 110
>sp|Q02284|5HT1F_MOUSE 5-hydroxytryptamine receptor 1F OS=Mus musculus GN=Htr1f PE=2
SV=1
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVY 61
N VIAAI++ + L ANYLI SLAV D +VA LVMP VY
Sbjct: 41 NSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVY 83
>sp|O08890|5HT1F_CAVPO 5-hydroxytryptamine receptor 1F OS=Cavia porcellus GN=HTR1F PE=3
SV=1
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVY 61
N VIAAI++ + L ANYLI SLAV D +VA LVMP VY
Sbjct: 41 NSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVY 83
>sp|P46636|5HT1B_CRIGR 5-hydroxytryptamine receptor 1B OS=Cricetulus griseus GN=HTR1B PE=2
SV=1
Length = 386
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 63 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPVSTMYTVTGR 110
>sp|P60020|5HT1B_PANTR 5-hydroxytryptamine receptor 1B OS=Pan troglodytes GN=HTR1B PE=3
SV=1
Length = 390
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 67 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 114
>sp|P28222|5HT1B_HUMAN 5-hydroxytryptamine receptor 1B OS=Homo sapiens GN=HTR1B PE=1 SV=1
Length = 390
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 67 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 114
>sp|Q9N2B7|5HT1B_GORGO 5-hydroxytryptamine receptor 1B OS=Gorilla gorilla gorilla GN=HTR1B
PE=3 SV=1
Length = 390
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FVIA + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 67 NAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 114
>sp|P79748|5HT1D_TAKRU 5-hydroxytryptamine receptor 1D OS=Takifugu rubripes GN=htr1d
PE=3 SV=1
Length = 379
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELN 64
N FVIA I L + L + AN+LI SLAV D++V+ LVMP+ VY ++
Sbjct: 54 NAFVIATIFLTRKLHTPANFLIGSLAVTDMLVSILVMPISIVYTVS 99
>sp|P49144|5HT1B_RABIT 5-hydroxytryptamine receptor 1B OS=Oryctolagus cuniculus GN=HTR1B
PE=2 SV=1
Length = 390
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 19 NVFVIAAILLEKNLQSVANYLIVSLAVADLMVACLVMPLGAVYELNAK 66
N FV+A + + L + ANYLI SLAV DL+V+ LVMP+ +Y + +
Sbjct: 67 NAFVVATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGR 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,323,631
Number of Sequences: 539616
Number of extensions: 568922
Number of successful extensions: 2520
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1934
Number of HSP's gapped (non-prelim): 608
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)