BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4361
(122 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322791144|gb|EFZ15706.1| hypothetical protein SINV_12236 [Solenopsis invicta]
Length = 147
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 81/112 (72%), Gaps = 9/112 (8%)
Query: 17 KVYICVMCIVLRE-------SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTA 69
+V++ ++ + L ++ CGPG +GRR +K TPLV+KQHVPNVSENTL A
Sbjct: 31 QVFLLILSLWLPVLDNGGGLALACGPGRGAGRR--PNLRKPTPLVFKQHVPNVSENTLPA 88
Query: 70 SGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQLKNKMPHYAD 121
SG SEG+ISR D RFRDL+PNYN DIIFKD+EGTGADRLMTQ+ ++ + D
Sbjct: 89 SGLSEGKISRFDSRFRDLVPNYNSDIIFKDEEGTGADRLMTQVNARVLLFKD 140
>gi|332019846|gb|EGI60307.1| Sonic hedgehog protein [Acromyrmex echinatior]
Length = 216
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
++ CGPG +GRR +K+TPLV+KQHVPNVSENTL ASG SEGRI+R D RFRDL+P
Sbjct: 48 ALACGPGRGAGRR--PNLRKLTPLVFKQHVPNVSENTLPASGLSEGRITRYDSRFRDLVP 105
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+EG+GADRLMTQ
Sbjct: 106 NYNTDIIFKDEEGSGADRLMTQ 127
>gi|321454675|gb|EFX65836.1| putative signaling protein hedgehog [Daphnia pulex]
Length = 570
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG + RRR R K+TPLV+KQHVPNVSENTL ASG +EG+I+RDD RF+ L+P
Sbjct: 110 ATACGPGRGANRRRSPR--KLTPLVFKQHVPNVSENTLGASGLTEGKITRDDPRFQQLVP 167
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DI+FKD+EGTGADRLMTQ
Sbjct: 168 NYNTDIVFKDEEGTGADRLMTQ 189
>gi|294610354|dbj|BAJ05335.1| hedgehog protein [Daphnia magna]
Length = 548
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG + RRR R K+TPLV+KQHVPNVSENTL ASG +EG+I+RDD RF+ L+P
Sbjct: 88 ATACGPGRGANRRRSPR--KLTPLVFKQHVPNVSENTLGASGLTEGKITRDDPRFQQLVP 145
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DI+FKD+EGTGADRLMTQ
Sbjct: 146 NYNTDIVFKDEEGTGADRLMTQ 167
>gi|30961831|gb|AAP38182.1| hedgehog, partial [Artemia franciscana]
Length = 421
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 55/72 (76%), Positives = 64/72 (88%), Gaps = 2/72 (2%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
GRRR R K+TPLV+KQH+PN+SENTL ASG SEG+I+RDD RF+DL+PNYN DIIFKD
Sbjct: 2 GRRRGPR--KLTPLVFKQHIPNMSENTLGASGLSEGKITRDDPRFKDLVPNYNSDIIFKD 59
Query: 100 DEGTGADRLMTQ 111
+EGTGADRLMTQ
Sbjct: 60 EEGTGADRLMTQ 71
>gi|328778280|ref|XP_001122646.2| PREDICTED: sonic hedgehog protein A-like [Apis mellifera]
Length = 375
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/65 (81%), Positives = 59/65 (90%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNVSENTL ASG SEGR+SR D RFRDL+PNYN DIIFKD+EGTGADR
Sbjct: 65 RKLTPLVFKQHVPNVSENTLPASGLSEGRVSRHDSRFRDLVPNYNADIIFKDEEGTGADR 124
Query: 108 LMTQL 112
LMTQ
Sbjct: 125 LMTQF 129
>gi|270002351|gb|EEZ98798.1| hypothetical protein TcasGA2_TC001363 [Tribolium castaneum]
Length = 114
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/67 (77%), Positives = 62/67 (92%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNV ENTLTASG +EGRI R+D RF+DL+PNYNQDI+FKD+EGTGADRL
Sbjct: 37 KLTPLVFKQHVPNVPENTLTASGLTEGRIGRNDSRFKDLVPNYNQDIVFKDEEGTGADRL 96
Query: 109 MTQLKNK 115
MTQ++ K
Sbjct: 97 MTQVREK 103
>gi|345494261|ref|XP_001605475.2| PREDICTED: sonic hedgehog protein-like [Nasonia vitripennis]
Length = 424
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 60/64 (93%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNVSENTL ASG EGR+SR+DKRFRDL+PNYN DIIFKD+EGTGADR
Sbjct: 31 RKLTPLVFKQHVPNVSENTLPASGLGEGRVSRNDKRFRDLVPNYNVDIIFKDEEGTGADR 90
Query: 108 LMTQ 111
LMTQ
Sbjct: 91 LMTQ 94
>gi|307206339|gb|EFN84396.1| Sonic hedgehog protein [Harpegnathos saltator]
Length = 167
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/65 (81%), Positives = 61/65 (93%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNVSENTL ASG SEGR+SRDD +FRDL+PNYN DIIFKD+EGTGADR
Sbjct: 68 RKLTPLVFKQHVPNVSENTLPASGLSEGRVSRDDSKFRDLVPNYNSDIIFKDEEGTGADR 127
Query: 108 LMTQL 112
LMTQ+
Sbjct: 128 LMTQV 132
>gi|167234445|ref|NP_001107837.1| hedgehog precursor [Tribolium castaneum]
Length = 392
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/63 (80%), Positives = 59/63 (93%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNV ENTLTASG +EGRI R+D RF+DL+PNYNQDI+FKD+EGTGADRL
Sbjct: 37 KLTPLVFKQHVPNVPENTLTASGLTEGRIGRNDSRFKDLVPNYNQDIVFKDEEGTGADRL 96
Query: 109 MTQ 111
MTQ
Sbjct: 97 MTQ 99
>gi|307175355|gb|EFN65374.1| Sonic hedgehog protein A [Camponotus floridanus]
Length = 302
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNVSENTL ASG EGRISRDD RFRDL+PNYN DI+FKD+EGTGADRL
Sbjct: 211 KLTPLVFKQHVPNVSENTLPASGLGEGRISRDDSRFRDLVPNYNSDIVFKDEEGTGADRL 270
Query: 109 MTQ 111
MTQ
Sbjct: 271 MTQ 273
>gi|224459198|gb|ACN43334.1| hedgehog [Tribolium castaneum]
Length = 221
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 63/71 (88%), Gaps = 2/71 (2%)
Query: 41 RRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDD 100
RRR R K+TPLV+KQHVPNV ENTLTASG +EGRI R+D RF+DL+PNYNQDI+FKD+
Sbjct: 1 RRRGPR--KLTPLVFKQHVPNVPENTLTASGLTEGRIGRNDSRFKDLVPNYNQDIVFKDE 58
Query: 101 EGTGADRLMTQ 111
EGTGADRLMTQ
Sbjct: 59 EGTGADRLMTQ 69
>gi|383857349|ref|XP_003704167.1| PREDICTED: tiggy-winkle hedgehog protein-like [Megachile rotundata]
Length = 443
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNVSENTL ASG SEGR+SR D RFRDL+PNYN DIIFKD+EGTGADR
Sbjct: 65 RKLTPLVFKQHVPNVSENTLPASGLSEGRVSRHDSRFRDLVPNYNADIIFKDEEGTGADR 124
Query: 108 LMTQ 111
LMTQ
Sbjct: 125 LMTQ 128
>gi|380020973|ref|XP_003694349.1| PREDICTED: tiggy-winkle hedgehog protein-like [Apis florea]
Length = 464
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNVSENTL ASG SEGR+SR D RFRDL+PNYN DIIFKD+EGTGADR
Sbjct: 65 RKLTPLVFKQHVPNVSENTLPASGLSEGRVSRHDSRFRDLVPNYNADIIFKDEEGTGADR 124
Query: 108 LMTQ 111
LMTQ
Sbjct: 125 LMTQ 128
>gi|340726512|ref|XP_003401601.1| PREDICTED: tiggy-winkle hedgehog protein-like [Bombus terrestris]
Length = 443
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNVSENTL ASG SEGR+SR D RFRDL+PNYN DIIFKD+EGTGADR
Sbjct: 65 RKLTPLVFKQHVPNVSENTLPASGISEGRVSRHDSRFRDLVPNYNADIIFKDEEGTGADR 124
Query: 108 LMTQ 111
LMTQ
Sbjct: 125 LMTQ 128
>gi|350405340|ref|XP_003487404.1| PREDICTED: sonic hedgehog protein A-like [Bombus impatiens]
Length = 456
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNVSENTL ASG SEGR+SR D RFRDL+PNYN DIIFKD+EGTGADRL
Sbjct: 79 KLTPLVFKQHVPNVSENTLPASGISEGRVSRHDSRFRDLVPNYNADIIFKDEEGTGADRL 138
Query: 109 MTQ 111
MTQ
Sbjct: 139 MTQ 141
>gi|255969369|gb|ACU45353.1| sonic hedgehog [Latimeria menadoensis]
Length = 421
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/107 (56%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
Query: 18 VYICVMCIVLRES-MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGR 76
V + ++C L S + CGPG GRR+Y KK+TPL YKQ +PNV+E TL ASG EG+
Sbjct: 11 VLVGLICSSLVSSGLTCGPGRGYGRRKYP--KKLTPLAYKQFIPNVAEKTLGASGRYEGK 68
Query: 77 ISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 69 ITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAIS 115
>gi|45382239|ref|NP_990152.1| sonic hedgehog protein precursor [Gallus gallus]
gi|6094281|sp|Q91035.1|SHH_CHICK RecName: Full=Sonic hedgehog protein; Short=SHH; Contains: RecName:
Full=Sonic hedgehog protein N-product; Contains:
RecName: Full=Sonic hedgehog protein C-product; Flags:
Precursor
gi|453527|gb|AAA72428.1| sonic hedgehog [Gallus gallus]
Length = 425
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/93 (56%), Positives = 70/93 (75%), Gaps = 4/93 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+IC + ++ + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+
Sbjct: 15 FICAL--LVSSGLTCGPGRGIGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKIT 70
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 71 RNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 103
>gi|327274422|ref|XP_003221976.1| PREDICTED: sonic hedgehog protein-like [Anolis carolinensis]
Length = 427
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
S+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR +RF++L P
Sbjct: 26 SLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRSSERFKELTP 83
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+E TGADRLMTQ
Sbjct: 84 NYNPDIIFKDEENTGADRLMTQ 105
>gi|158053032|dbj|BAF81895.1| sonic hedgehog [Suncus murinus]
Length = 431
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Query: 25 IVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRF 84
++ R + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF
Sbjct: 17 MLARPGLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERF 74
Query: 85 RDLIPNYNQDIIFKDDEGTGADRLMTQ 111
++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 75 KELTPNYNPDIIFKDEENTGADRLMTQ 101
>gi|122056674|gb|ABM66102.1| Sonic hedgehog [Leucoraja erinacea]
Length = 417
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 22 VMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDD 81
V C + + CGPG GRR++ R K+TPL YKQ +PNV+E TL ASG EG+I+R+
Sbjct: 12 VCCSLFSSARACGPGRGYGRRKHPR--KLTPLAYKQFIPNVAEKTLGASGRYEGKITRNS 69
Query: 82 KRFRDLIPNYNQDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
+RF++L PNYN DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 70 ERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAIS 111
>gi|309951106|ref|NP_001185482.1| sonic hedgehog protein precursor [Monodelphis domestica]
Length = 477
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 27 LRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRD 86
+ + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++
Sbjct: 18 MSSGLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKE 75
Query: 87 LIPNYNQDIIFKDDEGTGADRLMTQ 111
L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 76 LTPNYNPDIIFKDEENTGADRLMTQ 100
>gi|354497372|ref|XP_003510794.1| PREDICTED: desert hedgehog protein [Cricetulus griseus]
Length = 374
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGRI+R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRIARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|148223535|ref|NP_001079260.1| desert hedgehog protein A precursor [Xenopus laevis]
gi|6014961|sp|Q91610.1|DHHA_XENLA RecName: Full=Desert hedgehog protein A; AltName: Full=Cephalic
hedgehog protein; AltName: Full=Desert hedgehog protein
1; Short=DHH-1; AltName: Full=X-CHH; Contains: RecName:
Full=Desert hedgehog protein A N-product; Contains:
RecName: Full=Desert hedgehog protein A C-product;
Flags: Precursor
gi|1147828|gb|AAA85163.1| cephalic hedgehog protein [Xenopus laevis]
Length = 396
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 58/98 (59%), Positives = 70/98 (71%), Gaps = 5/98 (5%)
Query: 17 KVYICVMC--IVLRESMCCGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHS 73
++ I +C ++L CCGPG G GRRRY R K+ PL YKQ VPNV E TL ASG S
Sbjct: 5 RIVILAICCGLLLVPVRCCGPGRGPVGRRRYMR--KLVPLHYKQFVPNVPEKTLGASGKS 62
Query: 74 EGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
EG+I R +RF +L+PNYN DIIFKD+E TGADRLMT+
Sbjct: 63 EGKIHRGSERFIELVPNYNPDIIFKDEEKTGADRLMTE 100
>gi|332206332|ref|XP_003252244.1| PREDICTED: desert hedgehog protein [Nomascus leucogenys]
Length = 396
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYAR-KQLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|189066613|dbj|BAG36160.1| unnamed protein product [Homo sapiens]
Length = 396
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYAR-KQLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|19482158|ref|NP_066382.1| desert hedgehog protein preproprotein [Homo sapiens]
gi|297691735|ref|XP_002823229.1| PREDICTED: desert hedgehog protein [Pongo abelii]
gi|397511010|ref|XP_003825875.1| PREDICTED: desert hedgehog protein [Pan paniscus]
gi|426372421|ref|XP_004053122.1| PREDICTED: desert hedgehog protein [Gorilla gorilla gorilla]
gi|6166118|sp|O43323.1|DHH_HUMAN RecName: Full=Desert hedgehog protein; Short=DHH; AltName:
Full=HHG-3; Contains: RecName: Full=Desert hedgehog
protein N-product; Contains: RecName: Full=Desert
hedgehog protein C-product; Flags: Precursor
gi|2887457|dbj|BAA24866.1| hedgehog [Homo sapiens]
gi|23273191|gb|AAH33507.1| Desert hedgehog homolog (Drosophila) [Homo sapiens]
gi|119578443|gb|EAW58039.1| desert hedgehog homolog (Drosophila) [Homo sapiens]
gi|307686477|dbj|BAJ21169.1| desert hedgehog homolog [synthetic construct]
Length = 396
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYAR-KQLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|440905550|gb|ELR55920.1| Desert hedgehog protein, partial [Bos grunniens mutus]
Length = 397
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 24 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVTRGSERFRDLVPNY 82
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 83 NPDIIFKDEENSGADRLMTE 102
>gi|194666942|ref|XP_001788921.1| PREDICTED: desert hedgehog protein [Bos taurus]
gi|297474551|ref|XP_002687352.1| PREDICTED: desert hedgehog protein [Bos taurus]
gi|296487852|tpg|DAA29965.1| TPA: desert hedgehog-like [Bos taurus]
Length = 396
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVTRGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|431901374|gb|ELK08400.1| Desert hedgehog protein [Pteropus alecto]
Length = 396
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|395841654|ref|XP_003793649.1| PREDICTED: desert hedgehog protein [Otolemur garnettii]
Length = 396
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|359323131|ref|XP_003640009.1| PREDICTED: LOW QUALITY PROTEIN: desert hedgehog protein [Canis
lupus familiaris]
Length = 391
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|338726208|ref|XP_001915405.2| PREDICTED: LOW QUALITY PROTEIN: desert hedgehog protein-like [Equus
caballus]
Length = 399
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|301783637|ref|XP_002927234.1| PREDICTED: desert hedgehog protein-like [Ailuropoda melanoleuca]
gi|281343716|gb|EFB19300.1| hypothetical protein PANDA_016999 [Ailuropoda melanoleuca]
Length = 396
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|148232136|ref|NP_001090638.1| desert hedgehog precursor [Xenopus (Silurana) tropicalis]
gi|117558464|gb|AAI25726.1| dhh protein [Xenopus (Silurana) tropicalis]
Length = 396
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 58/94 (61%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Query: 20 ICVMC-IVLRESMCCGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRI 77
+ V C ++L CCGPG G GRRRY R K+ PL YKQ VPNV E TL ASG SEG+I
Sbjct: 9 LAVCCWLLLVPVCCCGPGRGPVGRRRYMR--KLVPLRYKQFVPNVPEKTLGASGKSEGKI 66
Query: 78 SRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R +RF +L+PNYN DIIFKD+E TGADRLMT+
Sbjct: 67 RRGSERFIELVPNYNPDIIFKDEENTGADRLMTE 100
>gi|73978766|ref|XP_850450.1| PREDICTED: sonic hedgehog protein isoform 2 [Canis lupus
familiaris]
Length = 461
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 53/92 (57%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ V +++ + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR
Sbjct: 11 VLVCALLMCSGLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISR 68
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 69 NSERFKELTPNYNPDIIFKDEENTGADRLMTQ 100
>gi|347300278|ref|NP_001231442.1| sonic hedgehog protein preproprotein [Sus scrofa]
Length = 458
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/90 (57%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Query: 22 VMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDD 81
+ ++L + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+
Sbjct: 13 ISSLLLCSGLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNS 70
Query: 82 KRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 71 ERFKELTPNYNPDIIFKDEENTGADRLMTQ 100
>gi|296211564|ref|XP_002752473.1| PREDICTED: desert hedgehog protein [Callithrix jacchus]
gi|403296557|ref|XP_003939169.1| PREDICTED: desert hedgehog protein [Saimiri boliviensis
boliviensis]
Length = 396
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|6094282|sp|Q90385.1|SHH_CYNPY RecName: Full=Sonic hedgehog protein; Short=SHH; Contains: RecName:
Full=Sonic hedgehog protein N-product; Contains:
RecName: Full=Sonic hedgehog protein C-product; Flags:
Precursor
gi|1236744|dbj|BAA09657.1| Secretion protein [Cynops pyrrhogaster]
Length = 432
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 53/93 (56%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+IC + ++ + CGPG G R+ R+KK+TPL YKQ PNV E TL ASG EG+I+
Sbjct: 15 FICAL--LVPSGLSCGPGRGIGTRK--RFKKLTPLAYKQFTPNVPEKTLGASGRYEGKIT 70
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 71 RNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 103
>gi|224044657|ref|XP_002190744.1| PREDICTED: sonic hedgehog protein [Taeniopygia guttata]
Length = 425
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/93 (54%), Positives = 70/93 (75%), Gaps = 4/93 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+IC + ++ + CGPG G+R++ +K+TPL YKQ +PNV+E TL ASG EG+I+
Sbjct: 15 FICAL--LVSSGLTCGPGRGIGKRKHP--QKLTPLAYKQFIPNVAEKTLGASGRYEGKIT 70
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 71 RNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 103
>gi|324120791|dbj|BAJ78785.1| hedgehog homologue protein [Lethenteron camtschaticum]
Length = 474
Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 56/92 (60%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
IC + + S CGPG GRRR R K+TPL YKQ VPNV+E TL ASG EG+I+R
Sbjct: 15 ICSLAVT--PSRACGPGRTYGRRRQPR--KLTPLAYKQFVPNVAEKTLGASGRYEGKIAR 70
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 71 GSERFKELTPNYNPDIIFKDEENTGADRLMTQ 102
>gi|395540924|ref|XP_003772400.1| PREDICTED: desert hedgehog protein [Sarcophilus harrisii]
Length = 399
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG EGR+ R +RFRDL+PNY
Sbjct: 26 CGPGRGPVGRRRYVR-KQLIPLLYKQFVPSVPERTLGASGQPEGRVVRGSERFRDLVPNY 84
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 85 NPDIIFKDEENSGADRLMTE 104
>gi|6136068|sp|Q90419.1|TWHH_DANRE RecName: Full=Tiggy-winkle hedgehog protein; Short=TWHH; AltName:
Full=Sonic hedgehog protein B; Short=SHHB; Contains:
RecName: Full=Tiggy-winkle hedgehog protein N-product;
Contains: RecName: Full=Tiggy-winkle hedgehog protein
C-product; Flags: Precursor
gi|1171140|gb|AAC59741.1| tiggy-winkle hedgehog [Danio rerio]
Length = 416
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
Query: 15 KEKVYICVMCIVLRE-SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHS 73
K+ +C + ++L + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG
Sbjct: 8 KQFALLCFISLLLTPCGLACGPGRGYGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGKY 65
Query: 74 EGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
EG+I+R+ +RF++LIPNYN DIIFKD+E T ADRLMT+ K+K+ A S
Sbjct: 66 EGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAIS 115
>gi|6681181|ref|NP_031883.1| desert hedgehog protein precursor [Mus musculus]
gi|6014965|sp|Q61488.1|DHH_MOUSE RecName: Full=Desert hedgehog protein; Short=DHH; AltName:
Full=HHG-3; Contains: RecName: Full=Desert hedgehog
protein N-product; Contains: RecName: Full=Desert
hedgehog protein C-product; Flags: Precursor
gi|443942|emb|CAA53924.1| desert hedgehog [Mus musculus]
gi|26329051|dbj|BAC28264.1| unnamed protein product [Mus musculus]
gi|148672209|gb|EDL04156.1| desert hedgehog [Mus musculus]
gi|162318236|gb|AAI56113.1| Desert hedgehog [synthetic construct]
gi|162319588|gb|AAI56906.1| Desert hedgehog [synthetic construct]
Length = 396
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP++ E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSMPERTLGASGPAEGRVTRGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|348580187|ref|XP_003475860.1| PREDICTED: desert hedgehog protein [Cavia porcellus]
Length = 396
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K+ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYGR-KQPVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|395838331|ref|XP_003792069.1| PREDICTED: sonic hedgehog protein [Otolemur garnettii]
Length = 449
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|402885870|ref|XP_003906367.1| PREDICTED: desert hedgehog protein [Papio anubis]
Length = 396
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG +EG+++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYAR-KQLVPLLYKQFVPGVPERTLGASGPAEGKVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|355564194|gb|EHH20694.1| Desert hedgehog protein [Macaca mulatta]
gi|384940680|gb|AFI33945.1| desert hedgehog protein preproprotein [Macaca mulatta]
gi|387541804|gb|AFJ71529.1| desert hedgehog protein preproprotein [Macaca mulatta]
Length = 396
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG +EG+++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYAR-KQLVPLLYKQFVPGVPERTLGASGPAEGKVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|274327782|ref|NP_445819.1| desert hedgehog precursor [Rattus norvegicus]
gi|149032106|gb|EDL87018.1| desert hedgehog homolog (Drosophila) [Rattus norvegicus]
Length = 396
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP++ E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSMPERTLGASGPAEGRVTRGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|149031428|gb|EDL86418.1| sonic hedgehog homolog (Drosophila) [Rattus norvegicus]
Length = 437
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 23 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 80
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 81 YNPDIIFKDEENTGADRLMTQ 101
>gi|344267912|ref|XP_003405809.1| PREDICTED: desert hedgehog protein-like [Loxodonta africana]
Length = 396
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP++ E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSMPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|410964293|ref|XP_003988690.1| PREDICTED: LOW QUALITY PROTEIN: desert hedgehog protein [Felis
catus]
Length = 396
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP++ E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSMPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|50878283|ref|NP_571274.2| tiggy-winkle hedgehog protein precursor [Danio rerio]
gi|50417149|gb|AAH78321.1| Sonic hedgehog b [Danio rerio]
Length = 416
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
Query: 15 KEKVYICVMCIVLRE-SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHS 73
K+ +C + ++L + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG
Sbjct: 8 KQFALLCFISLLLTPCGLACGPGRGYGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGKY 65
Query: 74 EGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
EG+I+R+ +RF++LIPNYN DIIFKD+E T ADRLMT+ K+K+ A S
Sbjct: 66 EGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAIS 115
>gi|312145488|gb|ADQ28491.1| sonic hedgehog [Dromaius novaehollandiae]
Length = 190
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 4/93 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+IC + + + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+
Sbjct: 15 FICALLV--SSGLTCGPGRGIGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKIT 70
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 71 RNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 103
>gi|21617861|ref|NP_033196.1| sonic hedgehog protein precursor [Mus musculus]
gi|6094284|sp|Q62226.2|SHH_MOUSE RecName: Full=Sonic hedgehog protein; Short=SHH; AltName:
Full=HHG-1; Contains: RecName: Full=Sonic hedgehog
protein N-product; Contains: RecName: Full=Sonic
hedgehog protein C-product; Flags: Precursor
gi|999398|gb|AAB34105.1| Hhg-1 product [mice, Peptide, 437 aa]
gi|2597988|emb|CAA53922.1| sonic hedgehog [Mus musculus]
gi|26346615|dbj|BAC36956.1| unnamed protein product [Mus musculus]
gi|38648737|gb|AAH63087.1| Sonic hedgehog [Mus musculus]
gi|148705284|gb|EDL37231.1| sonic hedgehog [Mus musculus]
Length = 437
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 23 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 80
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 81 YNPDIIFKDEENTGADRLMTQ 101
>gi|390466933|ref|XP_002807093.2| PREDICTED: LOW QUALITY PROTEIN: sonic hedgehog protein [Callithrix
jacchus]
Length = 474
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLSYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|119624948|gb|EAX04543.1| sonic hedgehog homolog (Drosophila) [Homo sapiens]
gi|302313187|gb|ADL14518.1| sonic hedgehog homolog (Drosophila) [Homo sapiens]
Length = 465
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|4506939|ref|NP_000184.1| sonic hedgehog protein preproprotein [Homo sapiens]
gi|6094283|sp|Q15465.1|SHH_HUMAN RecName: Full=Sonic hedgehog protein; Short=SHH; AltName:
Full=HHG-1; Contains: RecName: Full=Sonic hedgehog
protein N-product; Contains: RecName: Full=Sonic
hedgehog protein C-product; Flags: Precursor
gi|663157|gb|AAA62179.1| sonic hedgehog protein [Homo sapiens]
gi|36968310|gb|AAQ87879.1| sonic hedgehog homolog (Drosophila) [Homo sapiens]
gi|41393459|gb|AAS01990.1| unknown [Homo sapiens]
gi|51094663|gb|EAL23913.1| sonic hedgehog homolog (Drosophila) [Homo sapiens]
gi|108752132|gb|AAI11926.1| SHH protein [synthetic construct]
gi|208967466|dbj|BAG73747.1| sonic hedgehog homolog [synthetic construct]
Length = 462
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|26342679|dbj|BAC34996.1| unnamed protein product [Mus musculus]
Length = 437
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 23 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 80
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 81 YNPDIIFKDEENTGADRLMTQ 101
>gi|348567438|ref|XP_003469506.1| PREDICTED: sonic hedgehog protein [Cavia porcellus]
Length = 444
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|332870271|ref|XP_001147185.2| PREDICTED: sonic hedgehog protein [Pan troglodytes]
Length = 465
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|297289745|ref|XP_001106515.2| PREDICTED: sonic hedgehog protein-like [Macaca mulatta]
Length = 465
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|51511316|gb|AAU04946.1| sonic hedgehog precursor [Astyanax mexicanus]
Length = 429
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/91 (61%), Positives = 70/91 (76%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG GRR++ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++LIPNYN
Sbjct: 21 CGPGRGYGRRKHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELIPNYN 78
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 79 PDIIFKDEENTGADRLMTQRCKDKLNSLAIS 109
>gi|393894638|gb|AFN26749.1| hedgehog, partial [Archegozetes longisetosus]
Length = 416
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 65/75 (86%), Gaps = 1/75 (1%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNVSENTL ASG +EG++SRD +RF++L+PNYN DIIFKD+EGTGADRL
Sbjct: 90 KLTPLVFKQHVPNVSENTLGASGLNEGKVSRDHQRFKELVPNYNSDIIFKDEEGTGADRL 149
Query: 109 MTQ-LKNKMPHYADS 122
MTQ LK K+ A S
Sbjct: 150 MTQRLKEKLNTLAIS 164
>gi|426358608|ref|XP_004046597.1| PREDICTED: sonic hedgehog protein [Gorilla gorilla gorilla]
Length = 465
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|402865521|ref|XP_003896967.1| PREDICTED: LOW QUALITY PROTEIN: sonic hedgehog protein [Papio
anubis]
Length = 616
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|291397346|ref|XP_002715068.1| PREDICTED: sonic hedgehog [Oryctolagus cuniculus]
Length = 451
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|45822215|emb|CAE83646.1| hedgehog protein [Glomeris marginata]
Length = 511
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/63 (79%), Positives = 57/63 (90%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNVSENTL ASG EGRI+RDD RF++L+PNYN DI FKD+EGTGADRL
Sbjct: 127 KLTPLVFKQHVPNVSENTLGASGLPEGRITRDDSRFKELVPNYNTDIYFKDEEGTGADRL 186
Query: 109 MTQ 111
MTQ
Sbjct: 187 MTQ 189
>gi|332263735|ref|XP_003280908.1| PREDICTED: LOW QUALITY PROTEIN: sonic hedgehog protein [Nomascus
leucogenys]
Length = 465
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|301605836|ref|XP_002932544.1| PREDICTED: sonic hedgehog protein-like [Xenopus (Silurana)
tropicalis]
Length = 240
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+IC + V + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+
Sbjct: 12 FICTL--VAPPGLACGPGRGIGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKIT 67
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 68 RNSDRFKELTPNYNPDIIFKDEENTGADRLMTQ 100
>gi|351697621|gb|EHB00540.1| Desert hedgehog protein [Heterocephalus glaber]
Length = 396
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K+ PL+YKQ VP+V E TL ASG +EG+++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYGR-KQPVPLLYKQFVPSVPERTLGASGPAEGKVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|50508063|dbj|BAD30089.1| sonic hedgehog [Meriones unguiculatus]
Length = 437
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 23 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 80
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 81 YNPDIIFKDEENTGADRLMTQ 101
>gi|38373944|gb|AAR19208.1| SHH precursor [Cyprinus carpio]
Length = 417
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/93 (59%), Positives = 70/93 (75%), Gaps = 3/93 (3%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG GRR++ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 22 LACGPGRGYGRRKHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
YN DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 80 YNPDIIFKDEENTGADRLMTQRCKDKLNSLAIS 112
>gi|83267701|gb|ABB99398.1| sonic hedgehog [Cyprinus carpio]
Length = 418
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG GRR++ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 22 LACGPGRGYGRRKHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|242003707|ref|XP_002422829.1| hypothetical protein, conserved [Pediculus humanus corporis]
gi|212505699|gb|EEB10091.1| hypothetical protein, conserved [Pediculus humanus corporis]
Length = 412
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/63 (80%), Positives = 56/63 (88%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNVSENTL ASG +EG I+RDD RF DLIPNYN DIIFKD+EGTGADR
Sbjct: 28 KLTPLVFKQHVPNVSENTLGASGLTEGPITRDDPRFGDLIPNYNSDIIFKDEEGTGADRF 87
Query: 109 MTQ 111
MTQ
Sbjct: 88 MTQ 90
>gi|432114494|gb|ELK36342.1| Desert hedgehog protein [Myotis davidii]
Length = 348
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Query: 30 SMCCGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLI 88
+ CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R +RFRDL+
Sbjct: 20 AQSCGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVARGSERFRDLV 78
Query: 89 PNYNQDIIFKDDEGTGADRLMTQ 111
PNYN DIIFKD+E +GADRLMT+
Sbjct: 79 PNYNPDIIFKDEENSGADRLMTE 101
>gi|344254289|gb|EGW10393.1| Histone-lysine N-methyltransferase MLL2 [Cricetulus griseus]
Length = 4002
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 54/80 (67%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG +EGRI+R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRIARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 82 NPDIIFKDEENSGADRLMTE 101
>gi|194210184|ref|XP_001914920.1| PREDICTED: LOW QUALITY PROTEIN: sonic hedgehog protein-like [Equus
caballus]
Length = 402
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|444729367|gb|ELW69789.1| Sonic hedgehog protein [Tupaia chinensis]
Length = 207
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|345324225|ref|XP_001512454.2| PREDICTED: sonic hedgehog protein-like [Ornithorhynchus anatinus]
Length = 114
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Query: 27 LRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRD 86
+ + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++
Sbjct: 21 ISSGLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKE 78
Query: 87 LIPNYNQDIIFKDDEGTGADRLMTQLK 113
L PNYN DIIFKD+E TGADRLMTQ++
Sbjct: 79 LTPNYNPDIIFKDEENTGADRLMTQVE 105
>gi|8394267|ref|NP_058917.1| sonic hedgehog protein precursor [Rattus norvegicus]
gi|6094286|sp|Q63673.1|SHH_RAT RecName: Full=Sonic hedgehog protein; Short=SHH; Contains: RecName:
Full=Sonic hedgehog protein N-product; Contains:
RecName: Full=Sonic hedgehog protein C-product; Flags:
Precursor
gi|452123|gb|AAA20999.1| vhh-1 [Rattus norvegicus]
Length = 437
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+R++ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 23 LACGPGRGFGKRQHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 80
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 81 YNPDIIFKDEENTGADRLMTQ 101
>gi|395539787|ref|XP_003771847.1| PREDICTED: sonic hedgehog protein [Sarcophilus harrisii]
Length = 384
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PNYN
Sbjct: 24 CGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYN 81
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 82 PDIIFKDEENTGADRLMTQ 100
>gi|11907527|dbj|BAB19658.1| hedgehog protein [Gryllus bimaculatus]
Length = 447
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/62 (75%), Positives = 57/62 (91%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+TPLV+KQHVPNVSE+TL A+G +E R++RDD RFRDL+PNYN DI+FKD+EGTGADRLM
Sbjct: 50 LTPLVFKQHVPNVSEHTLGAAGPAERRVARDDPRFRDLVPNYNADIVFKDEEGTGADRLM 109
Query: 110 TQ 111
TQ
Sbjct: 110 TQ 111
>gi|69956981|gb|AAZ04357.1| hedgehog protein [Capitella teleta]
gi|443719583|gb|ELU09678.1| hypothetical protein CAPTEDRAFT_129621 [Capitella teleta]
Length = 391
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 58/63 (92%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPN+SENTL ASG +EGRI+RDD RF+DL+ NYN D++FKD+EGTGADR+
Sbjct: 37 KMTPLVFKQHVPNISENTLGASGLNEGRITRDDPRFKDLVENYNPDVVFKDEEGTGADRI 96
Query: 109 MTQ 111
M+Q
Sbjct: 97 MSQ 99
>gi|2341018|gb|AAB67604.1| Sonic Hedgehog; associated with holoprosencephaly in humans and
segment polarity defects in Drosophila [Homo sapiens]
Length = 187
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|432097322|gb|ELK27646.1| Sonic hedgehog protein [Myotis davidii]
Length = 192
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L P
Sbjct: 24 GLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTP 81
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+E TGADRLMTQ
Sbjct: 82 NYNPDIIFKDEENTGADRLMTQ 103
>gi|397490880|ref|XP_003816413.1| PREDICTED: sonic hedgehog protein [Pan paniscus]
Length = 419
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|357616147|gb|EHJ70031.1| hedgehog protein [Danaus plexippus]
Length = 151
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ ++ + L + CGPG RR R +ITPLV+ QH PN++EN+ +ASG EGRI+R
Sbjct: 3 LTLVLLWLGAAAACGPGRGFTRRHGPR--RITPLVFNQHDPNINENSKSASGPPEGRITR 60
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQLKN 114
+D++F+DL+PNYN DI FKD+EGTGADRLMTQ ++
Sbjct: 61 NDEKFKDLVPNYNPDIDFKDEEGTGADRLMTQFQS 95
>gi|281348968|gb|EFB24552.1| hypothetical protein PANDA_019156 [Ailuropoda melanoleuca]
Length = 266
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L P
Sbjct: 21 GLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTP 78
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+E TGADRLMTQ
Sbjct: 79 NYNPDIIFKDEENTGADRLMTQ 100
>gi|301787303|ref|XP_002929067.1| PREDICTED: sonic hedgehog protein-like [Ailuropoda melanoleuca]
Length = 315
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L P
Sbjct: 21 GLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTP 78
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+E TGADRLMTQ
Sbjct: 79 NYNPDIIFKDEENTGADRLMTQ 100
>gi|426226679|ref|XP_004007466.1| PREDICTED: GTPase RhebL1 [Ovis aries]
Length = 303
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ +C + GP GRRRY R K++ PL+YKQ VP+V E TL ASG +EGR++R
Sbjct: 27 VWCLCAAWHFGLGLGP---VGRRRYVR-KQLVPLLYKQFVPSVPERTLGASGPAEGRVTR 82
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQLK 113
+RFRDL+PNYN DIIFKD+E +GADRLMT+L+
Sbjct: 83 GSERFRDLVPNYNPDIIFKDEENSGADRLMTELQ 116
>gi|327277053|ref|XP_003223280.1| PREDICTED: desert hedgehog protein-like [Anolis carolinensis]
Length = 410
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/95 (54%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
Query: 19 YICVM-CIVLRESMCCGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGR 76
++C+ C++L + CGPG G GR+ + R K + PL YKQ VP+V+E TL ASG +EG+
Sbjct: 8 WLCLAGCLLLPLAHSCGPGRGPPGRKPHGR-KNLIPLQYKQFVPSVAEQTLGASGKAEGK 66
Query: 77 ISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+ R RF+DL+PNYN DIIFKD+E TGADRLMT+
Sbjct: 67 VGRHSSRFKDLVPNYNPDIIFKDEENTGADRLMTE 101
>gi|354475748|ref|XP_003500089.1| PREDICTED: sonic hedgehog protein-like [Cricetulus griseus]
gi|344249926|gb|EGW06030.1| Sonic hedgehog protein [Cricetulus griseus]
Length = 226
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|431921786|gb|ELK19058.1| Sonic hedgehog protein [Pteropus alecto]
Length = 262
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Query: 22 VMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDD 81
V ++L + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+
Sbjct: 13 VSSLLLCSGLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNS 70
Query: 82 KRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+R ++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 71 ERVKELTPNYNPDIIFKDEENTGADRLMTQ 100
>gi|30961829|gb|AAP38181.1| hedgehog, partial [Euscorpius flavicaudis]
Length = 381
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/71 (69%), Positives = 62/71 (87%), Gaps = 2/71 (2%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
GRR+ R +K+TPLV+KQHVPNV+E TL ASG +G+I+RD+ RF++L+PNYN DIIFKD
Sbjct: 2 GRRQ--RPRKLTPLVFKQHVPNVAETTLAASGQGDGKINRDETRFKELVPNYNPDIIFKD 59
Query: 100 DEGTGADRLMT 110
+EGTGADRLMT
Sbjct: 60 EEGTGADRLMT 70
>gi|333471203|gb|AEF38366.1| mutant desert hedgehog precursor [Homo sapiens]
Length = 395
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 23 CGPGRGPVGRRRYAR-KQLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFK DE +GADRLMT+
Sbjct: 82 NPDIIFK-DENSGADRLMTE 100
>gi|403302512|ref|XP_003941901.1| PREDICTED: sonic hedgehog protein [Saimiri boliviensis boliviensis]
Length = 431
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLSYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|129270073|ref|NP_001030165.2| Indian hedgehog homolog a precursor [Danio rerio]
gi|126631468|gb|AAI33984.1| Indian hedgehog homolog a [Danio rerio]
Length = 413
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR KK+TPL YKQ PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 24 CGPGRGHGKRRPP--KKLTPLNYKQFSPNVAEKTLGASGRIEGKITRNSERFKELTPNYN 81
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 82 PDIIFKDEENTGADRLMTQRCKDKLNSLAIS 112
>gi|67482919|gb|AAY68016.1| indian hedgehog precursor [Danio rerio]
Length = 413
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR KK+TPL YKQ PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 24 CGPGRGHGKRRPP--KKLTPLNYKQFSPNVAEKTLGASGRIEGKITRNSERFKELTPNYN 81
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 82 PDIIFKDEENTGADRLMTQRCKDKLNSLAIS 112
>gi|348515719|ref|XP_003445387.1| PREDICTED: indian hedgehog B protein-like [Oreochromis niloticus]
Length = 430
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR KK+ PL YKQ PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 27 CGPGRGYGKRRLP--KKLIPLAYKQFSPNVAEKTLGASGRPEGKITRNSERFKELTPNYN 84
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 85 TDIIFKDEEDTGADRLMTQRCKDKLNSLAIS 115
>gi|4885028|gb|AAD31927.1| desert hedgehog protein [Rattus norvegicus]
Length = 129
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP++ E TL ASG +EGR++R +RFRDL+PNY
Sbjct: 5 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPSMPERTLGASGPAEGRVTRGSERFRDLVPNY 63
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 64 NPDIIFKDEENSGADRLMTE 83
>gi|1581788|prf||2117287A Sonic hedgehog gene
Length = 462
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHR--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLM Q
Sbjct: 80 YNPDIIFKDEENTGADRLMPQ 100
>gi|297474309|ref|XP_002687031.1| PREDICTED: sonic hedgehog protein [Bos taurus]
gi|296488228|tpg|DAA30341.1| TPA: sonic hedgehog homolog [Bos taurus]
Length = 535
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRR--NPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|193617681|ref|XP_001943707.1| PREDICTED: protein hedgehog-like [Acyrthosiphon pisum]
Length = 437
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/92 (58%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+CVM V E CGP G ++ +K+ PLV++QH PNVSE ++TASG EGRI R
Sbjct: 27 VCVMAAVGVEG--CGP--LRGPSKFRNPRKMKPLVFQQHEPNVSEYSITASGPPEGRIQR 82
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+D RF +L+PNYN DI FKDDEGTGADRLMTQ
Sbjct: 83 NDSRFMELVPNYNADIEFKDDEGTGADRLMTQ 114
>gi|432934217|ref|XP_004081912.1| PREDICTED: indian hedgehog B protein [Oryzias latipes]
Length = 408
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR+ KK+ PL YKQ PNV+E TL ASG EG+I+R +RF++L PNYN
Sbjct: 26 CGPGRGIGKRRFP--KKLIPLAYKQFSPNVAEKTLGASGRPEGKITRSSERFKELTPNYN 83
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 84 TDIIFKDEEDTGADRLMTQRCKDKLNSLAIS 114
>gi|148234419|ref|NP_001081782.1| sonic hedgehog protein precursor [Xenopus laevis]
gi|530994|gb|AAA49981.1| hedgehog protein [Xenopus laevis]
Length = 446
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/93 (55%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+IC + V + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+
Sbjct: 14 FICTL--VTPPGLACGPGRGIGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKIT 69
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ F++L PNYN DI+FKD+E TGADRLMTQ
Sbjct: 70 RNSDCFKELTPNYNPDIMFKDEESTGADRLMTQ 102
>gi|334349654|ref|XP_001362681.2| PREDICTED: hypothetical protein LOC100010004 [Monodelphis
domestica]
Length = 373
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP+V E TL ASG EGR+ R +RFRDL+PNY
Sbjct: 26 CGPGRGPVGRRRYVR-KQLIPLLYKQFVPSVPERTLGASGQPEGRVVRGSERFRDLVPNY 84
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 85 NPDIIFKDEENSGADRLMTE 104
>gi|47226298|emb|CAG09266.1| unnamed protein product [Tetraodon nigroviridis]
Length = 415
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR KK+ PL YKQ PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 28 CGPGRGYGKRRLP--KKLIPLAYKQFSPNVAEKTLGASGRPEGKITRNSERFKELTPNYN 85
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 86 TDIIFKDEEDTGADRLMTQRCKDKLNSLAIS 116
>gi|6175032|sp|Q92000.1|SHH_XENLA RecName: Full=Sonic hedgehog protein; AltName: Full=VHH-1; AltName:
Full=X-SHH; Contains: RecName: Full=Sonic hedgehog
protein N-product; Contains: RecName: Full=Sonic
hedgehog protein C-product; Flags: Precursor
gi|790938|gb|AAC42227.1| morphogen [Xenopus laevis]
gi|1147826|gb|AAA85162.1| sonic hedgehog [Xenopus laevis]
Length = 444
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/93 (55%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+IC + V + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+
Sbjct: 13 FICTL--VTPPGLACGPGRGIGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKIT 68
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ F++L PNYN DI+FKD+E TGADRLMTQ
Sbjct: 69 RNSDCFKELTPNYNPDIMFKDEESTGADRLMTQ 101
>gi|344298193|ref|XP_003420778.1| PREDICTED: sonic hedgehog protein-like [Loxodonta africana]
Length = 421
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PN
Sbjct: 22 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPN 79
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 80 YNPDIIFKDEENTGADRLMTQ 100
>gi|340749183|gb|AEK67437.1| sonic hedgehog [Capra hircus]
Length = 97
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG G+RR KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L P
Sbjct: 18 GLACGPGRGFGKRRNP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTP 75
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+E TGADRLMTQ
Sbjct: 76 NYNPDIIFKDEENTGADRLMTQ 97
>gi|119891786|ref|XP_614193.3| PREDICTED: sonic hedgehog protein [Bos taurus]
Length = 188
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG G+RR KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L P
Sbjct: 21 GLACGPGRGFGKRR--NPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTP 78
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+E TGADRLMTQ
Sbjct: 79 NYNPDIIFKDEENTGADRLMTQ 100
>gi|410906437|ref|XP_003966698.1| PREDICTED: indian hedgehog B protein-like [Takifugu rubripes]
Length = 414
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR R K+ P+ YKQ PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 24 CGPGRGYGKRRSTR--KLVPIAYKQFSPNVAEKTLGASGRYEGKITRNSERFKELTPNYN 81
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADR+MTQ K+K+ A S
Sbjct: 82 PDIIFKDEENTGADRMMTQRCKDKLNSLAIS 112
>gi|21518666|gb|AAM60752.1|AF435840_1 hedgehog [Patella vulgata]
Length = 416
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG SG RR + KK TPLV+KQ+VPNVSEN+L ASG SEGRI RDD +F+DL+ N+N
Sbjct: 27 CGPGRGSGSRR--KAKKHTPLVFKQNVPNVSENSLGASGMSEGRIKRDDAKFKDLVRNHN 84
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DI+FK++EG G+D MT+
Sbjct: 85 ADIVFKNEEGDGSDYHMTR 103
>gi|348518181|ref|XP_003446610.1| PREDICTED: indian hedgehog B protein-like [Oreochromis niloticus]
Length = 419
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG +G+RR R K+ PL YKQ PNV E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 24 CGPGRGNGKRRPPR--KLVPLAYKQFTPNVGEKTLGASGRYEGKITRNSERFKELTPNYN 81
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 82 PDIIFKDEENTGADRLMTQ 100
>gi|241644201|ref|XP_002409621.1| desert hedgehog, putative [Ixodes scapularis]
gi|215501385|gb|EEC10879.1| desert hedgehog, putative [Ixodes scapularis]
Length = 111
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 55/64 (85%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNV EN L ASG EG++ R KRFRDL+PNYN DI+FKD+EGTGADR
Sbjct: 41 RKLTPLVFKQHVPNVPENMLAASGLPEGKLDRGHKRFRDLVPNYNSDIVFKDEEGTGADR 100
Query: 108 LMTQ 111
LMTQ
Sbjct: 101 LMTQ 104
>gi|426228668|ref|XP_004008418.1| PREDICTED: sonic hedgehog protein [Ovis aries]
Length = 406
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRR--NPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DIIFKD+E TGADRLMTQ
Sbjct: 83 YNPDIIFKDEENTGADRLMTQ 103
>gi|45384428|ref|NP_990288.1| indian hedgehog protein precursor [Gallus gallus]
gi|6016342|sp|Q98938.1|IHH_CHICK RecName: Full=Indian hedgehog protein; Short=IHH; Contains:
RecName: Full=Indian hedgehog protein N-product;
Contains: RecName: Full=Indian hedgehog protein
C-product; Flags: Precursor
gi|1493842|gb|AAC60010.1| indian hedgehog protein [Gallus gallus]
Length = 408
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 32 CCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CCGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R+ +RF++L PNY
Sbjct: 23 CCGPGRVVGSRRRPP-RKLIPLAYKQFSPNVPEKTLGASGRYEGKIARNSERFKELTPNY 81
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E TGADRLMTQ
Sbjct: 82 NPDIIFKDEENTGADRLMTQ 101
>gi|345322363|ref|XP_001510918.2| PREDICTED: desert hedgehog protein-like [Ornithorhynchus anatinus]
Length = 205
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG G GRRRY R K++ PL+YKQ VP V E TL ASG EGR+ R +RFR+L+PNY
Sbjct: 26 CGPGRGPVGRRRYVR-KQLVPLLYKQFVPGVPERTLGASGQPEGRVVRGSERFRELVPNY 84
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E +GADRLMT+
Sbjct: 85 NPDIIFKDEENSGADRLMTE 104
>gi|410897118|ref|XP_003962046.1| PREDICTED: indian hedgehog B protein-like [Takifugu rubripes]
Length = 418
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR KK+ PL YKQ PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 28 CGPGRGYGKRRLP--KKLIPLAYKQFSPNVAEKTLGASGRPEGKITRNSERFKELTPNYN 85
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DI FKD+E TGADRLMTQ K+K+ A S
Sbjct: 86 TDIFFKDEEETGADRLMTQRCKDKLNSLAIS 116
>gi|227059299|gb|ACP18968.1| hedgehog [Rhabdopleura compacta]
Length = 269
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 69/93 (74%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
Y V+ ++ E+M CG G S RRR + +TPL YKQ VP +SENTL ASG SEGRI
Sbjct: 9 YCTVLLLLAEEAMGCGSGRGSSRRRGSGRQPLTPLKYKQIVPEISENTLGASGLSEGRIE 68
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+D++F +L PNYN DIIFKD+EGTGADRLMTQ
Sbjct: 69 REDEQFNELTPNYNADIIFKDEEGTGADRLMTQ 101
>gi|15626255|emb|CAB58231.2| hedgehog protein [Branchiostoma belcheri]
Length = 415
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
S CGPG + GRRR+ R K+TP VYKQ +P VSENT ASG GRI+RD +RF L
Sbjct: 25 SEACGPGTRYGRRRHPR--KLTPFVYKQQMPAVSENTFGASGLFNGRITRDSERFHTLKQ 82
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
N+N DIIFKD+E TGADR MTQ
Sbjct: 83 NFNTDIIFKDEEKTGADRFMTQ 104
>gi|291191389|pdb|3M1N|A Chain A, Crystal Structure Of Human Sonic Hedgehog N-Terminal
Domain
gi|291191390|pdb|3M1N|B Chain B, Crystal Structure Of Human Sonic Hedgehog N-Terminal
Domain
Length = 175
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 32 CCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
GPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PNY
Sbjct: 1 IIGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNY 58
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E TGADRLMTQ
Sbjct: 59 NPDIIFKDEENTGADRLMTQ 78
>gi|300859529|gb|ADK38669.1| hedgehog [Platynereis dumerilii]
Length = 424
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 58/64 (90%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+TPLV+KQHVPNVSENTL ASG +EG+ISR D++F+DL+ NYN DIIFK++E TGADR
Sbjct: 41 RKMTPLVFKQHVPNVSENTLGASGLAEGKISRSDQKFQDLVVNYNPDIIFKNEENTGADR 100
Query: 108 LMTQ 111
+MTQ
Sbjct: 101 IMTQ 104
>gi|2738383|gb|AAB94412.1| sonic hedgehog-related protein [Pleurodeles waltl]
Length = 434
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR R +K+TPL YKQ +PNVSE TL ASG E +I+R+ +RF++L PNYN
Sbjct: 27 CGPGRGIGQRR--RPQKLTPLAYKQFIPNVSEKTLGASGRYEVKITRNSERFQELTPNYN 84
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFK +E TGADRLMTQ K+K+ A S
Sbjct: 85 PDIIFKVEENTGADRLMTQRCKDKLNSLAIS 115
>gi|62465510|gb|AAX83260.1| sonic hedgehog [Ambystoma mexicanum]
Length = 101
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Query: 21 CVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRD 80
V +++ + CGPG G+RR + KK+TPL YKQ +PNV+E TL ASG EG+I+R+
Sbjct: 16 LVWALLVPSGLTCGPGRGIGKRR--QPKKLTPLAYKQFIPNVAEKTLGASGRYEGKITRN 73
Query: 81 DKRFRDLIPNYNQDIIFKDDEGTGADRL 108
RF++L PNYN DIIFKD+E TGADRL
Sbjct: 74 SDRFKELTPNYNPDIIFKDEENTGADRL 101
>gi|444515377|gb|ELV10876.1| Protein LMBR1L [Tupaia chinensis]
Length = 1188
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/98 (52%), Positives = 69/98 (70%), Gaps = 7/98 (7%)
Query: 20 ICVMCIV------LRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHS 73
+ +C+V +R + G + G RRY R K++ PL+YKQ VP+V E TL ASG +
Sbjct: 797 LTTLCLVKTFTAAVRAELIRAFGERVGWRRYVR-KQLVPLLYKQFVPSVPERTLGASGPA 855
Query: 74 EGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
EGR++R +RFRDL+PNYN DIIFKD+E +GADRLMT+
Sbjct: 856 EGRVTRGSERFRDLVPNYNPDIIFKDEENSGADRLMTE 893
>gi|206582001|pdb|3D1M|A Chain A, Crystal Structure Of Sonic Hedgehog Bound To The Third
Fniii Domain Of Cdo
gi|206582002|pdb|3D1M|B Chain B, Crystal Structure Of Sonic Hedgehog Bound To The Third
Fniii Domain Of Cdo
Length = 168
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
GPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 4 SGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYN 61
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 62 PDIIFKDEENTGADRLMTQ 80
>gi|410969514|ref|XP_003991240.1| PREDICTED: indian hedgehog protein [Felis catus]
Length = 404
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 23 MCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDK 82
+ +V+ + CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +
Sbjct: 11 LLLVVPAARGCGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSE 69
Query: 83 RFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 70 RFKELTPNYNPDIIFKDEENTGADRLMTQ 98
>gi|432849140|ref|XP_004066551.1| PREDICTED: indian hedgehog B protein-like [Oryzias latipes]
Length = 351
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 21 CVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRD 80
C M ++ S CGPG G+RR R K+ PL YKQ PNV+E TL ASG EG+I+R+
Sbjct: 13 CAM-LLSPASEGCGPGRGHGKRRSQR--KLVPLSYKQFSPNVAEKTLGASGRYEGKITRN 69
Query: 81 DKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 70 SERFKELTPNYNPDIIFKDEENTGADRLMTQ 100
>gi|297682095|ref|XP_002818767.1| PREDICTED: LOW QUALITY PROTEIN: sonic hedgehog protein [Pongo
abelii]
Length = 465
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Query: 31 MCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPN 90
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG + +ISR+ +RF++L PN
Sbjct: 25 LACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGSMKXKISRNSERFKELTPN 82
Query: 91 YNQDIIFKDDEGTGADRLMTQ 111
YN DII KD+E TGADRLMTQ
Sbjct: 83 YNPDIIXKDEENTGADRLMTQ 103
>gi|18858605|ref|NP_571163.1| indian hedgehog B protein precursor [Danio rerio]
gi|6016340|sp|Q98862.1|IHH_DANRE RecName: Full=Indian hedgehog B protein; Short=IHHB; AltName:
Full=Echidna hedgehog protein; Short=EHH; Contains:
RecName: Full=Indian hedgehog B protein N-product;
Contains: RecName: Full=Indian hedgehog B protein
C-product; Flags: Precursor
gi|1616585|emb|CAA69702.1| EHH protein [Danio rerio]
Length = 412
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR R K+TPL YKQ PNV+E TL ASG EG+++ +RF++L PNYN
Sbjct: 24 CGPGRGYGKRRTPR--KLTPLAYKQFSPNVAEKTLGASGRYEGKVTPSSERFKELTPNYN 81
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
DIIFKD+E TGADR+MTQ K+K+ A S
Sbjct: 82 PDIIFKDEENTGADRMMTQRCKDKLNSLAIS 112
>gi|14149643|ref|NP_034674.1| indian hedgehog protein [Mus musculus]
gi|1890097|gb|AAB49692.1| Indian hedgehog protein [Mus musculus]
gi|28422534|gb|AAH46984.1| Indian hedgehog [Mus musculus]
gi|74188366|dbj|BAE25832.1| unnamed protein product [Mus musculus]
gi|148667942|gb|EDL00359.1| Indian hedgehog [Mus musculus]
Length = 449
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 66 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 124
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 125 PDIIFKDEENTGADRLMTQ 143
>gi|403266835|ref|XP_003925566.1| PREDICTED: indian hedgehog protein [Saimiri boliviensis
boliviensis]
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|402889470|ref|XP_003908039.1| PREDICTED: indian hedgehog protein [Papio anubis]
Length = 472
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 89 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 147
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 148 PDIIFKDEENTGADRLMTQ 166
>gi|397495827|ref|XP_003818746.1| PREDICTED: indian hedgehog protein [Pan paniscus]
Length = 458
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 75 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 133
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 134 PDIIFKDEENTGADRLMTQ 152
>gi|395823427|ref|XP_003784988.1| PREDICTED: indian hedgehog protein [Otolemur garnettii]
Length = 410
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 27 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 85
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 86 PDIIFKDEENTGADRLMTQ 104
>gi|347300169|ref|NP_001231399.1| Indian hedgehog precursor [Sus scrofa]
Length = 410
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 27 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 85
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 86 PDIIFKDEENTGADRLMTQ 104
>gi|297669471|ref|XP_002812916.1| PREDICTED: indian hedgehog protein [Pongo abelii]
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|297264929|ref|XP_001092385.2| PREDICTED: indian hedgehog protein [Macaca mulatta]
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|296205629|ref|XP_002749847.1| PREDICTED: indian hedgehog protein [Callithrix jacchus]
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|291392259|ref|XP_002712641.1| PREDICTED: Indian hedgehog-like protein [Oryctolagus cuniculus]
Length = 429
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 46 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 104
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 105 PDIIFKDEENTGADRLMTQ 123
>gi|6166227|sp|P97812.2|IHH_MOUSE RecName: Full=Indian hedgehog protein; Short=IHH; AltName:
Full=HHG-2; Contains: RecName: Full=Indian hedgehog
protein N-product; Contains: RecName: Full=Indian
hedgehog protein C-product; Flags: Precursor
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|119392086|ref|NP_002172.2| indian hedgehog protein precursor [Homo sapiens]
gi|33112634|sp|Q14623.4|IHH_HUMAN RecName: Full=Indian hedgehog protein; Short=IHH; AltName:
Full=HHG-2; Contains: RecName: Full=Indian hedgehog
protein N-product; Contains: RecName: Full=Indian
hedgehog protein C-product; Flags: Precursor
gi|119591081|gb|EAW70675.1| Indian hedgehog homolog (Drosophila) [Homo sapiens]
gi|223459666|gb|AAI36588.1| IHH protein [Homo sapiens]
gi|223460384|gb|AAI36589.1| IHH protein [Homo sapiens]
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|213688398|ref|NP_445836.1| indian hedgehog homolog precursor [Rattus norvegicus]
gi|149016132|gb|EDL75378.1| Indian hedgehog homolog, (Drosophila) [Rattus norvegicus]
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|13990994|dbj|BAA33523.2| hedgehog [Homo sapiens]
Length = 411
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|344268183|ref|XP_003405941.1| PREDICTED: indian hedgehog protein [Loxodonta africana]
Length = 462
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 29 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 87
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 88 PDIIFKDEENTGADRLMTQ 106
>gi|351694652|gb|EHA97570.1| Indian hedgehog protein [Heterocephalus glaber]
Length = 410
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Query: 33 CGPGGK-SGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG GRRR R K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNY
Sbjct: 27 CGPGRVVGGRRRPPR--KLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNY 84
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E TGADRLMTQ
Sbjct: 85 NPDIIFKDEENTGADRLMTQ 104
>gi|441669501|ref|XP_003272432.2| PREDICTED: indian hedgehog protein [Nomascus leucogenys]
Length = 486
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 103 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 161
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 162 PDIIFKDEENTGADRLMTQ 180
>gi|312379157|gb|EFR25525.1| hypothetical protein AND_09056 [Anopheles darlingi]
Length = 334
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 56/63 (88%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+ PLV+KQHVPNVSEN+L+ASG EG ISR+D +FR+L NYN+DIIFKD+EGTGADR+
Sbjct: 261 KLLPLVFKQHVPNVSENSLSASGMQEGPISRNDSKFRNLETNYNKDIIFKDEEGTGADRV 320
Query: 109 MTQ 111
MTQ
Sbjct: 321 MTQ 323
>gi|327260318|ref|XP_003214981.1| PREDICTED: indian hedgehog protein-like [Anolis carolinensis]
Length = 415
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 35 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARNSERFKELTPNYN 93
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 94 PDIIFKDEENTGADRLMTQ 112
>gi|126337804|ref|XP_001364321.1| PREDICTED: indian hedgehog protein-like [Monodelphis domestica]
Length = 599
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 216 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 274
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 275 PDIIFKDEENTGADRLMTQ 293
>gi|347965843|ref|XP_321721.5| AGAP001412-PA [Anopheles gambiae str. PEST]
gi|333470328|gb|EAA01079.5| AGAP001412-PA [Anopheles gambiae str. PEST]
Length = 509
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+ PLV+KQHVPNVSEN+L+ASG EG ISR+D +FR L NYN+DIIFKD+EGTGADR+
Sbjct: 146 KLLPLVFKQHVPNVSENSLSASGMQEGPISRNDSKFRSLETNYNKDIIFKDEEGTGADRV 205
Query: 109 MTQ 111
MTQ
Sbjct: 206 MTQ 208
>gi|114583388|ref|XP_526034.2| PREDICTED: indian hedgehog protein [Pan troglodytes]
Length = 411
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/79 (62%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF +L PNYN
Sbjct: 28 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFMELTPNYN 86
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 87 PDIIFKDEENTGADRLMTQ 105
>gi|405974446|gb|EKC39089.1| Sonic hedgehog protein [Crassostrea gigas]
Length = 246
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 17 KVYICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGR 76
+ + I+ S+ C SGRR R TPLVYKQHVPNVSENTL ASG +EGR
Sbjct: 11 QAAVLAFLILTGPSLQCASPRGSGRRH--RTGNRTPLVYKQHVPNVSENTLGASGLAEGR 68
Query: 77 ISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
IS++D RF+ L+ N N DIIF+D+EG G DR+MTQ
Sbjct: 69 ISKEDPRFKKLVTNDNPDIIFRDEEGDGTDRIMTQ 103
>gi|432928357|ref|XP_004081159.1| PREDICTED: sonic hedgehog protein A [Oryzias latipes]
Length = 412
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|5441265|dbj|BAA82360.1| sonic hedgehog [Paralichthys olivaceus]
Length = 414
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|348556538|ref|XP_003464078.1| PREDICTED: LOW QUALITY PROTEIN: indian hedgehog protein-like [Cavia
porcellus]
Length = 533
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/80 (63%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Query: 33 CGPGGK-SGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CGPG GRRR R K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNY
Sbjct: 151 CGPGRVVGGRRRPPR--KLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNY 208
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
N DIIFKD+E TGADRLMTQ
Sbjct: 209 NPDIIFKDEENTGADRLMTQ 228
>gi|317420001|emb|CBN82037.1| Sonic hedgehog protein A [Dicentrarchus labrax]
Length = 414
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|241913487|pdb|3HO5|H Chain H, Crystal Structure Of Hedgehog-interacting Protein (hhip)
And Sonic Hedgehog (shh) Complex
gi|296863726|pdb|3MXW|A Chain A, Crystal Structure Sonic Hedgehog Bound To The 5e1 Fab
Fragment
Length = 169
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PNYN DIIFKD
Sbjct: 3 GKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKD 60
Query: 100 DEGTGADRLMTQ 111
+E TGADRLMTQ
Sbjct: 61 EENTGADRLMTQ 72
>gi|157114095|ref|XP_001657979.1| hedgehog [Aedes aegypti]
gi|108877449|gb|EAT41674.1| AAEL006708-PA [Aedes aegypti]
Length = 418
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+ PLV+KQHVPNVSEN+L ASG EG ISR+D +FR+L NYN+DIIFKD+EGTGADR+
Sbjct: 52 KLLPLVFKQHVPNVSENSLGASGMQEGPISRNDSKFRNLETNYNKDIIFKDEEGTGADRV 111
Query: 109 MTQ 111
MTQ
Sbjct: 112 MTQ 114
>gi|47223445|emb|CAG04306.1| unnamed protein product [Tetraodon nigroviridis]
Length = 451
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ 111
LMTQ
Sbjct: 97 LMTQ 100
>gi|348503436|ref|XP_003439270.1| PREDICTED: tiggy-winkle hedgehog protein-like [Oreochromis
niloticus]
Length = 415
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGKYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|51243769|gb|AAT99577.1| sonic hedgehog [Takifugu rubripes]
Length = 413
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|37811650|gb|AAR03826.1| sonic hedgehog [Trachemys scripta]
Length = 148
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PNYN DIIFKD
Sbjct: 2 GKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGTGADRLMTQ 111
+E TGADRLMTQ
Sbjct: 60 EENTGADRLMTQ 71
>gi|410909209|ref|XP_003968083.1| PREDICTED: sonic hedgehog protein A [Takifugu rubripes]
gi|24528448|emb|CAD45244.1| sonic hedgehog protein [Takifugu rubripes]
Length = 413
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|18859357|ref|NP_571138.1| sonic hedgehog protein A precursor [Danio rerio]
gi|6174983|sp|Q92008.1|SHH_DANRE RecName: Full=Sonic hedgehog protein A; Short=SHHA; AltName:
Full=VHH-1; Contains: RecName: Full=Sonic hedgehog
protein A N-product; Contains: RecName: Full=Sonic
hedgehog protein A C-product; Flags: Precursor
gi|452160|gb|AAA20998.1| vhh-1 [Danio rerio]
gi|525301|emb|CAA84738.1| sonic hedgehog [Danio rerio]
gi|1171142|gb|AAC59742.1| sonic hedgehog [Danio rerio]
gi|5714440|gb|AAD47913.1| sonic hedgehog protein [Danio rerio]
gi|94732293|emb|CAK04143.1| sonic hedgehog a [Danio rerio]
gi|190337952|gb|AAI62395.1| Shha protein [Danio rerio]
Length = 418
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|170035433|ref|XP_001845574.1| hedgehog [Culex quinquefasciatus]
gi|167877390|gb|EDS40773.1| hedgehog [Culex quinquefasciatus]
Length = 424
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/63 (73%), Positives = 54/63 (85%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+ PLV+KQHVPNVSEN+L ASG EG ISR+D +FR L NYN+DIIFKD+EGTGADR+
Sbjct: 58 KLLPLVFKQHVPNVSENSLGASGMQEGPISRNDSKFRSLETNYNKDIIFKDEEGTGADRV 117
Query: 109 MTQ 111
MTQ
Sbjct: 118 MTQ 120
>gi|60677667|dbj|BAD91000.1| Hedgehog [Hemicentrotus pulcherrimus]
Length = 278
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 22 VMCIVLRESMCCGPG--GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
V+C++ + C PG GK+ R +R TPL YKQ VPN+SE+T ASG EGRI+R
Sbjct: 12 VLCLIAL-TQACHPGRSGKTSHRPRNR----TPLQYKQRVPNISEDTFGASGPPEGRINR 66
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+D+RF L PN N DI+FKD+EGTGADRLMTQ
Sbjct: 67 NDERFNTLSPNNNDDIVFKDEEGTGADRLMTQ 98
>gi|85725250|ref|NP_001034065.1| hedgehog [Drosophila melanogaster]
gi|257051086|sp|Q02936.4|HH_DROME RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Short=Hh-Np; Short=N-Hh; Contains:
RecName: Full=Protein hedgehog C-product; Short=Hh-Cp;
AltName: Full=C-Hh; Flags: Precursor
gi|157610|gb|AAA16458.1| hedgehog protein [Drosophila melanogaster]
gi|435849|gb|AAB28646.1| segment polarity gene hedgehog [Drosophila sp.]
gi|84796187|gb|ABC66186.1| hedgehog [Drosophila melanogaster]
Length = 471
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ V+ +V + CGPG GR R + + PLV KQ +PN+SE T +ASG EG I R
Sbjct: 72 LIVLPMVFSPAHSCGPGRGLGRHRA---RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRR 128
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
D +F+DL+PNYN+DI+F+D+EGTGADRLM++
Sbjct: 129 DSPKFKDLVPNYNRDILFRDEEGTGADRLMSK 160
>gi|384220|prf||1905316A hedgehog gene
Length = 471
Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ V+ +V + CGPG GR R + + PLV KQ +PN+SE T +ASG EG I R
Sbjct: 72 LIVLPMVFSPAHSCGPGRGLGRHRA---RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRR 128
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
D +F+DL+PNYN+DI+F+D+EGTGADRLM++
Sbjct: 129 DSPKFKDLVPNYNRDILFRDEEGTGADRLMSK 160
>gi|3089555|gb|AAC15065.1| hedgehog [Lytechinus variegatus]
Length = 410
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/96 (55%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
Query: 18 VYICVMCIVLRESMCCGPG--GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEG 75
V I ++ + C PG GK+ R +R TPL YKQ VPN+SE+T ASG EG
Sbjct: 12 VQITTALCLIALTQACHPGRSGKTSHRPRNR----TPLQYKQKVPNISEDTFGASGPPEG 67
Query: 76 RISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
RI RDD+RF L PN N DI+FKD+EGTGADRLMTQ
Sbjct: 68 RIDRDDERFSKLSPNNNDDIVFKDEEGTGADRLMTQ 103
>gi|627246|pir||A49426 sonic hedgehog gene shh protein - zebra fish
gi|460880|gb|AAB29416.1| sonic hedgehog gene shh product/local cell-cell interaction
signaling protein [Brachydanio rerio=zebrafish, embryo,
Peptide, 415 aa]
Length = 415
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADR 96
Query: 108 LMTQ-LKNKMPHYADS 122
LMTQ K+K+ A S
Sbjct: 97 LMTQRCKDKLNSLAIS 112
>gi|197210944|gb|ACH48396.1| Shh [Maylandia zebra]
Length = 116
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 37 KKLTPLAYKQFIPNVAEKTLGASGKYEGKITRNSERFKELTPNYNTDIIFKDEENTGADR 96
Query: 108 LMTQ 111
LMTQ
Sbjct: 97 LMTQ 100
>gi|60593030|ref|NP_001012720.1| hedgehog precursor [Strongylocentrotus purpuratus]
gi|51236714|gb|AAT99014.1| hedgehog-like protein [Strongylocentrotus purpuratus]
Length = 411
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
Query: 22 VMCIVLRESMCCGPG--GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
V+C++ + C PG GK+ R +R TPL YKQ VPN+SE+T ASG EGRI+R
Sbjct: 17 VLCLIAL-TQACHPGRSGKTSHRPRNR----TPLQYKQRVPNISEDTFGASGPPEGRINR 71
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+D+RF L PN N DI+FKD EGTGADRLMTQ
Sbjct: 72 NDERFNTLSPNNNDDIVFKDKEGTGADRLMTQ 103
>gi|195331237|ref|XP_002032309.1| GM23589 [Drosophila sechellia]
gi|257096526|sp|B4HFB7.1|HH_DROSE RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|194121252|gb|EDW43295.1| GM23589 [Drosophila sechellia]
Length = 465
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ V+ ++ + CGPG GR R + + PLV KQ +PN+SE T +ASG EG I R
Sbjct: 66 LIVLPMMFSPAHSCGPGRGLGRHRA---RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRR 122
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
D +F+DL+PNYN+DI+F+D+EGTGADRLM++
Sbjct: 123 DSPKFKDLVPNYNRDILFRDEEGTGADRLMSK 154
>gi|309253979|gb|ADO60878.1| hedgehog [Bicyclus anynana]
Length = 182
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 56/64 (87%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+++TPLV+ QH PN+SEN+ +ASG EGRI+R+D++F+DL+PNYN DI FKDDEGTGADR
Sbjct: 13 RRMTPLVFNQHEPNISENSKSASGPPEGRITREDEKFKDLVPNYNPDIEFKDDEGTGADR 72
Query: 108 LMTQ 111
MTQ
Sbjct: 73 HMTQ 76
>gi|194910563|ref|XP_001982177.1| GG12458 [Drosophila erecta]
gi|257096522|sp|B3P7F8.1|HH_DROER RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|190656815|gb|EDV54047.1| GG12458 [Drosophila erecta]
Length = 465
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ V+ + + CGPG GR R + + PLV KQ +PN+SE T +ASG EG I R
Sbjct: 66 LIVLPMTFSPAHSCGPGRGLGRHRA---RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRR 122
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
D +F+DL+PNYN+DI+F+D+EGTGADRLM++
Sbjct: 123 DSPKFKDLVPNYNRDILFRDEEGTGADRLMSK 154
>gi|157834118|pdb|1VHH|A Chain A, A Potential Catalytic Site Within The Amino-Terminal
Signalling Domain Of Sonic Hedgehog
Length = 162
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR
Sbjct: 5 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADR 64
Query: 108 LMTQ 111
LMTQ
Sbjct: 65 LMTQ 68
>gi|320089776|pdb|3K7G|B Chain B, Crystal Structure Of The Indian Hedgehog N-Terminal
Signalling Domain
Length = 187
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 13 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 71
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 72 PDIIFKDEENTGADRLMTQ 90
>gi|38194211|dbj|BAD01490.1| hedgehog [Achaearanea tepidariorum]
Length = 404
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/64 (70%), Positives = 56/64 (87%), Gaps = 1/64 (1%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRD-LIPNYNQDIIFKDDEGTGADR 107
K+TPLV+KQHVPNV+E TL ASG SEG+++RD +F+ L+PNYN DIIF+D+EGTGADR
Sbjct: 35 KLTPLVFKQHVPNVNEFTLGASGQSEGKLTRDHPKFKSVLVPNYNSDIIFRDEEGTGADR 94
Query: 108 LMTQ 111
LMTQ
Sbjct: 95 LMTQ 98
>gi|320089778|pdb|3K7I|B Chain B, Crystal Structure Of The E131k Mutant Of The Indian
Hedgehog N- Terminal Signalling Domain
Length = 187
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 13 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 71
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 72 PDIIFKDEENTGADRLMTQ 90
>gi|195573076|ref|XP_002104521.1| GD18403 [Drosophila simulans]
gi|257096527|sp|B4R1D8.1|HH_DROSI RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|194200448|gb|EDX14024.1| GD18403 [Drosophila simulans]
Length = 395
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ V+ ++ + CGPG GR R + + PLV KQ +PN+SE T +ASG EG I R
Sbjct: 70 LIVLPMMFSPAHSCGPGRGLGRHRA---RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRR 126
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
D +F+DL+PNYN+DI+F+D+EGTGADRLM++
Sbjct: 127 DSPKFKDLVPNYNRDILFRDEEGTGADRLMSK 158
>gi|195502817|ref|XP_002098392.1| GE23980 [Drosophila yakuba]
gi|257096530|sp|B4PN49.1|HH_DROYA RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|194184493|gb|EDW98104.1| GE23980 [Drosophila yakuba]
Length = 465
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 3/79 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG GR R + + PLV KQ +PN+SE T +ASG EG I RD +F+DL+PNYN
Sbjct: 79 CGPGRGLGRHRA---RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVPNYN 135
Query: 93 QDIIFKDDEGTGADRLMTQ 111
+DI+F+D+EGTGADRLM++
Sbjct: 136 RDILFRDEEGTGADRLMSK 154
>gi|309252581|gb|ADO60264.1| hedgehog protein [Parhyale hawaiensis]
Length = 539
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K+ PL++K+HVPNV ENTL ASG +EG I+R RF +L+PNYN DIIF+D+EGTGADR
Sbjct: 40 RKLMPLIFKEHVPNVYENTLGASGLAEGPITRGSARFHELVPNYNPDIIFRDEEGTGADR 99
Query: 108 LMTQ 111
LMT+
Sbjct: 100 LMTE 103
>gi|431917964|gb|ELK17193.1| Indian hedgehog protein, partial [Pteropus alecto]
Length = 382
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 35 PGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQD 94
PG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN D
Sbjct: 1 PGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYNPD 59
Query: 95 IIFKDDEGTGADRLMTQ 111
IIFKD+E TGADRLMTQ
Sbjct: 60 IIFKDEENTGADRLMTQ 76
>gi|220897937|gb|ACL81248.1| sonic hedgehog-like protein [Oryzias melastigma]
Length = 156
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 53/63 (84%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRL
Sbjct: 1 KLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRL 60
Query: 109 MTQ 111
MTQ
Sbjct: 61 MTQ 63
>gi|432866239|ref|XP_004070754.1| PREDICTED: limb region 1 homolog-like protein-like [Oryzias
latipes]
Length = 930
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 8/98 (8%)
Query: 18 VYICVM----CIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHS 73
V +C++ C+ L E CGPG G R R +K+T + YKQ PN SEN L ASG +
Sbjct: 529 VQLCLLAAWTCVWLVEG--CGPGPGYGIR--SRPRKLTAMHYKQFFPNFSENNLGASGRA 584
Query: 74 EGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
EG+I+RD +RF +L+ NYN DI+FKD+E T ADRLMT+
Sbjct: 585 EGKITRDSERFNELVCNYNPDIVFKDEENTDADRLMTK 622
>gi|320089779|pdb|3K7J|B Chain B, Crystal Structure Of The D100e Mutant Of The Indian
Hedgehog N- Terminal Signalling Domain
Length = 187
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 13 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 71
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGA+RLMTQ
Sbjct: 72 PDIIFKDEENTGAERLMTQ 90
>gi|116267079|gb|ABJ96342.1| sonic hedgehog [Equus caballus]
Length = 91
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 30 SMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIP 89
+ CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L P
Sbjct: 18 GLACGPGRGFGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTP 75
Query: 90 NYNQDIIFKDDEGTGA 105
NYN DIIFKD+E TGA
Sbjct: 76 NYNPDIIFKDEENTGA 91
>gi|157612|gb|AAA28604.1| hedgehog protein [Drosophila melanogaster]
Length = 471
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 20 ICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISR 79
+ V+ +V + CGPG GR R + + PLV KQ +PN+SE T +ASG EG I R
Sbjct: 72 LIVLPMVFSPAHSCGPGRGLGRHRA---RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRR 128
Query: 80 DDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
D +F+DL+PNYN+DI+F+D+EGTGAD LM++
Sbjct: 129 DSPKFKDLVPNYNRDILFRDEEGTGADGLMSK 160
>gi|320089777|pdb|3K7H|B Chain B, Crystal Structure Of The E95k Mutant Of The Indian
Hedgehog N-Terminal Signalling Domain
Length = 187
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 13 CGPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYN 71
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD++ TGADRLMTQ
Sbjct: 72 PDIIFKDEKNTGADRLMTQ 90
>gi|51511320|gb|AAU04948.1| tiggy-winkle hedgehog protein [Astyanax mexicanus]
Length = 123
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E T ADR
Sbjct: 38 KKLTPLAYKQFIPNVAEKTLGASGKYEGKITRNSERFKELTPNYNPDIIFKDEENTNADR 97
Query: 108 LMTQ 111
LMTQ
Sbjct: 98 LMTQ 101
>gi|148231718|ref|NP_001079261.1| desert hedgehog protein B precursor [Xenopus laevis]
gi|6014962|sp|Q91611.1|DHHB_XENLA RecName: Full=Desert hedgehog protein B; AltName: Full=Desert
hedgehog protein 2; Short=DHH-2; AltName: Full=Hedgehog
protein 4; AltName: Full=X-HH4; Contains: RecName:
Full=Desert hedgehog protein B N-product; Contains:
RecName: Full=Desert hedgehog protein B C-product;
Flags: Precursor
gi|1147830|gb|AAA85164.1| hedgehog protein 4 [Xenopus laevis]
Length = 398
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 61/91 (67%)
Query: 21 CVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRD 80
C ++L CCGPG R +++ PL+YKQ VPNV E TL ASG SEG+I R
Sbjct: 12 CCCWLLLLPVRCCGPGRGPVGGRRRYMRRLVPLLYKQFVPNVPEKTLGASGKSEGKIRRG 71
Query: 81 DKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+RF L+PNYN DIIFKD+E TGADRLMT+
Sbjct: 72 SERFIKLVPNYNPDIIFKDEENTGADRLMTE 102
>gi|171904016|gb|ACB56635.1| sonic hedgehog [Python sebae]
Length = 295
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 51/61 (83%)
Query: 51 TPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMT 110
TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PNYN DIIFKD+E TGADRLMT
Sbjct: 1 TPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMT 60
Query: 111 Q 111
Q
Sbjct: 61 Q 61
>gi|380692160|dbj|BAL72735.1| sonic hedgehog, partial [Eptatretus burgeri]
Length = 154
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG GRRR +++TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN
Sbjct: 55 CGPGRMHGRRR--PPRRLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYN 112
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADR MTQ
Sbjct: 113 PDIIFKDEENTGADRPMTQ 131
>gi|171190132|gb|ACB42420.1| hedgehog [Biomphalaria glabrata]
Length = 427
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/63 (66%), Positives = 52/63 (82%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNVSENTL ASG ++GRI R D RF+ L+ N N DI+FKD+EG G DR+
Sbjct: 42 KLTPLVFKQHVPNVSENTLGASGLTDGRIKRGDARFKSLVRNNNPDILFKDEEGNGVDRI 101
Query: 109 MTQ 111
M+Q
Sbjct: 102 MSQ 104
>gi|348521558|ref|XP_003448293.1| PREDICTED: sonic hedgehog protein-like [Oreochromis niloticus]
Length = 458
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG + G R R +K+T + KQ PN+SEN L ASG +EG+I+R+ +RF +L+ NYN
Sbjct: 27 CGPGPRYGTR--PRPRKLTAMRLKQFFPNLSENNLGASGRAEGKIARNSERFNELVSNYN 84
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DI+FKD+E TGADR MT+
Sbjct: 85 PDIVFKDEENTGADRFMTK 103
>gi|297343206|pdb|3N1R|A Chain A, Crystal Structure Of Shhn
Length = 160
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLM
Sbjct: 5 LTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLM 64
Query: 110 TQ 111
TQ
Sbjct: 65 TQ 66
>gi|297343189|pdb|3N1G|B Chain B, Crystal Structure Of Dhhn Bound To Bocfn3
gi|297343191|pdb|3N1G|A Chain A, Crystal Structure Of Dhhn Bound To Bocfn3
gi|297343200|pdb|3N1Q|B Chain B, Crystal Structure Of Dhhn Bound To Cdofn3
gi|297343202|pdb|3N1Q|A Chain A, Crystal Structure Of Dhhn Bound To Cdofn3
gi|297343204|pdb|3N1Q|E Chain E, Crystal Structure Of Dhhn Bound To Cdofn3
Length = 170
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
K++ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNYN DIIFKD+E +GADR
Sbjct: 19 KQLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSGADR 78
Query: 108 LMTQ 111
LMT+
Sbjct: 79 LMTE 82
>gi|242556220|pdb|2WG4|A Chain A, Crystal Structure Of The Complex Between Human Hedgehog-
Interacting Protein Hip And Sonic Hedgehog Without
Calcium
Length = 155
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLM
Sbjct: 1 LTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLM 60
Query: 110 TQ 111
TQ
Sbjct: 61 TQ 62
>gi|74100009|gb|AAZ99217.1| hedgehog [Octopus bimaculoides]
Length = 420
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 25 IVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRF 84
+V S+ CGPG G+RR R K TPLV+KQH+PNVSENT+ ASG EG+I++ D RF
Sbjct: 19 LVTSHSLACGPGRGPGKRRGPR--KRTPLVFKQHIPNVSENTVGASGIHEGKITKPDPRF 76
Query: 85 RDLIPNYNQDIIFKDDEGTGADRLMTQ 111
++++ N N +I+F+D+E DR+M++
Sbjct: 77 KEMVTNLNPNIVFRDEEENNEDRVMSK 103
>gi|242556209|pdb|2WFX|A Chain A, Crystal Structure Of The Complex Between Human Hedgehog-
Interacting Protein Hip And Sonic Hedgehog In The
Presence Of Calcium
Length = 152
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLM
Sbjct: 1 LTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLM 60
Query: 110 TQ 111
TQ
Sbjct: 61 TQ 62
>gi|297343185|pdb|3N1F|A Chain A, Crystal Structure Of Ihhn Bound To Cdofn3
gi|297343186|pdb|3N1F|B Chain B, Crystal Structure Of Ihhn Bound To Cdofn3
gi|297343193|pdb|3N1M|B Chain B, Crystal Structure Of Ihhn Bound To Bocfn3
gi|297343195|pdb|3N1O|A Chain A, Crystal Structure Of Ihhn
gi|297343196|pdb|3N1O|B Chain B, Crystal Structure Of Ihhn
gi|297343197|pdb|3N1O|C Chain C, Crystal Structure Of Ihhn
gi|297343198|pdb|3N1P|B Chain B, Crystal Structure Of Ihhn Bound To Bocfn3
Length = 169
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 34 GPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQ 93
GPG G RR +K+ PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN
Sbjct: 5 GPGRVVGSRRRPP-RKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYNP 63
Query: 94 DIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 64 DIIFKDEENTGADRLMTQ 81
>gi|86355151|dbj|BAE78810.1| sonic hedgehog [Trachemys scripta]
Length = 91
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+ICV+ + + CGPG G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+IS
Sbjct: 15 FICVLLV--SSGLTCGPGRGIGKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKIS 70
Query: 79 RDDKRFRDLIPNYNQDIIFKD 99
R+ +RF++L PNYN DIIFKD
Sbjct: 71 RNSERFKELTPNYNPDIIFKD 91
>gi|189014905|gb|ACD69663.1| sonic hedgehog [Mus musculus]
Length = 214
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLM
Sbjct: 1 LTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELXPNYNPDIIFKDEENTGADRLM 60
Query: 110 TQ 111
TQ
Sbjct: 61 TQ 62
>gi|242556180|pdb|2WFQ|A Chain A, Crystal Structure Of The N-terminal Signalling Domain Of
Human Dhh Without Calcium
gi|242556202|pdb|2WFR|A Chain A, Crystal Structure Of The N-Terminal Signalling Domain Of
Human Dhh With Calcium
Length = 165
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 52/63 (82%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
++ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNYN DIIFKD+E +GADRL
Sbjct: 1 QLVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSGADRL 60
Query: 109 MTQ 111
MT+
Sbjct: 61 MTE 63
>gi|147898419|ref|NP_001079262.1| indian hedgehog protein precursor [Xenopus laevis]
gi|6016351|sp|Q91612.1|IHH_XENLA RecName: Full=Indian hedgehog protein; Short=IHH; AltName:
Full=Banded hedgehog protein; AltName: Full=X-BHH;
Contains: RecName: Full=Indian hedgehog protein
N-product; Contains: RecName: Full=Indian hedgehog
protein C-product; Flags: Precursor
gi|1147832|gb|AAA85165.1| banded hedgehog protein [Xenopus laevis]
Length = 409
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K++PL YKQ PNV E TL ASG EG+ISR+ +RF++L PNYN DIIFKD+E TGADRL
Sbjct: 38 KLSPLSYKQFSPNVPEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEEITGADRL 97
Query: 109 MTQ 111
MTQ
Sbjct: 98 MTQ 100
>gi|395486401|gb|AFN67112.1| sonic hedgehog, partial [Gambusia holbrooki]
Length = 135
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 52/62 (83%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+TP+ YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR+M
Sbjct: 1 LTPMAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRMM 60
Query: 110 TQ 111
TQ
Sbjct: 61 TQ 62
>gi|291240583|ref|XP_002740198.1| PREDICTED: hedgehog [Saccoglossus kowalevskii]
Length = 413
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/63 (66%), Positives = 53/63 (84%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
++TPL+YKQ +PNVSENTL ASG +E +I+R+D F+DL YN DI+FKD+EGTGADRL
Sbjct: 38 ELTPLLYKQCIPNVSENTLGASGPNEKKITREDDEFKDLQTVYNADIMFKDEEGTGADRL 97
Query: 109 MTQ 111
MTQ
Sbjct: 98 MTQ 100
>gi|242556214|pdb|2WG3|A Chain A, Crystal Structure Of The Complex Between Human Hedgehog-
Interacting Protein Hip And Desert Hedgehog Without
Calcium
gi|242556215|pdb|2WG3|B Chain B, Crystal Structure Of The Complex Between Human Hedgehog-
Interacting Protein Hip And Desert Hedgehog Without
Calcium
Length = 164
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+ PL+YKQ VP V E TL ASG +EGR++R +RFRDL+PNYN DIIFKD+E +GADRLM
Sbjct: 2 LVPLLYKQFVPGVPERTLGASGPAEGRVARGSERFRDLVPNYNPDIIFKDEENSGADRLM 61
Query: 110 TQ 111
T+
Sbjct: 62 TE 63
>gi|90659980|gb|ABD97267.1| hedgehog [Saccoglossus kowalevskii]
Length = 397
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/63 (66%), Positives = 53/63 (84%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
++TPL+YKQ +PNVSENTL ASG +E +I+R+D F+DL YN DI+FKD+EGTGADRL
Sbjct: 22 ELTPLLYKQCIPNVSENTLGASGPNEKKITREDDEFKDLQTVYNADIMFKDEEGTGADRL 81
Query: 109 MTQ 111
MTQ
Sbjct: 82 MTQ 84
>gi|166006800|gb|AAI58495.1| LOC100145111 protein [Xenopus (Silurana) tropicalis]
Length = 273
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K++PL YKQ PNV E TL ASG EG+ISR+ +RF++L PNYN DIIFKD+E TGADRL
Sbjct: 38 KLSPLSYKQFSPNVPEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRL 97
Query: 109 MTQ 111
MTQ
Sbjct: 98 MTQ 100
>gi|33318317|gb|AAQ05029.1| sonic hedgehog [Scophthalmus maximus]
Length = 137
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 50/60 (83%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 PLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQ 60
>gi|195453956|ref|XP_002074019.1| GK12833 [Drosophila willistoni]
gi|257096529|sp|B4NJP3.1|HH_DROWI RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|194170104|gb|EDW85005.1| GK12833 [Drosophila willistoni]
Length = 469
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+ + PLV KQ VPN+SE+ L ASG EG I RD +F+DL+PNYN+DI+FKD+EGTGADR
Sbjct: 89 QNLYPLVLKQTVPNLSEHQLGASGPLEGEIPRDSPKFKDLVPNYNRDIVFKDEEGTGADR 148
Query: 108 LMTQ 111
LMT+
Sbjct: 149 LMTK 152
>gi|440911037|gb|ELR60766.1| Indian hedgehog protein, partial [Bos grunniens mutus]
Length = 367
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/60 (68%), Positives = 47/60 (78%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PL YKQ PNV E TL ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 2 PLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQ 61
>gi|3170537|gb|AAC34384.1| fugu hedgehog [Takifugu rubripes]
Length = 442
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G R R +K+ + YKQ PN+SEN L ASG +EG+I+R+ +RF +L+ NYN
Sbjct: 27 CGPGPGYGIR--TRPRKLKAMYYKQFFPNLSENNLGASGRAEGKITRNSERFNELVCNYN 84
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DI+FKD+E T ADR MT+
Sbjct: 85 PDIVFKDEENTNADRFMTK 103
>gi|410899459|ref|XP_003963214.1| PREDICTED: indian hedgehog protein-like [Takifugu rubripes]
Length = 442
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G R R +K+ + YKQ PN+SEN L ASG +EG+I+R+ +RF +L+ NYN
Sbjct: 27 CGPGPGYGIR--TRPRKLKAMYYKQFFPNLSENNLGASGRAEGKITRNSERFNELVCNYN 84
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DI+FKD+E T ADR MT+
Sbjct: 85 PDIVFKDEENTNADRFMTK 103
>gi|301608862|ref|XP_002933988.1| PREDICTED: indian hedgehog protein [Xenopus (Silurana) tropicalis]
Length = 312
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 50/63 (79%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K++PL YKQ PNV E TL ASG EG+ISR+ +RF++L PNYN DIIF D+E TGADRL
Sbjct: 38 KLSPLSYKQFSPNVPEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFNDEENTGADRL 97
Query: 109 MTQ 111
MTQ
Sbjct: 98 MTQ 100
>gi|110659558|dbj|BAE98265.1| sonic hedgehog [Scyliorhinus torazame]
Length = 91
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 49/59 (83%)
Query: 53 LVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
L YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 LAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 59
>gi|83271042|gb|ABC00193.1| hedgehog [Haliotis asinina]
Length = 196
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 54/63 (85%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TPLV+KQHVPNVSENT+ ASG S+G I+++D +F+DL+ N N +I FKD+E TGADR+
Sbjct: 39 KLTPLVFKQHVPNVSENTIGASGLSDGAITKEDAKFKDLVSNENPNIEFKDEERTGADRM 98
Query: 109 MTQ 111
M++
Sbjct: 99 MSE 101
>gi|260794216|ref|XP_002592105.1| hedgehog protein [Branchiostoma floridae]
gi|229277320|gb|EEN48116.1| hedgehog protein [Branchiostoma floridae]
Length = 448
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/70 (61%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TP VYKQ +P VSENT ASG GRI+RD +RF L N+N DIIFKD+E TGADR
Sbjct: 42 KLTPFVYKQQMPAVSENTFGASGLFNGRITRDSERFHTLKQNFNTDIIFKDEEKTGADRF 101
Query: 109 MTQLKNKMPH 118
MTQ PH
Sbjct: 102 MTQ----TPH 107
>gi|71834388|ref|NP_001025286.1| desert hedgehog protein precursor [Danio rerio]
gi|67482937|gb|AAY68017.1| desert hedgehog precursor [Danio rerio]
Length = 447
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 46 RYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGA 105
R +K+TP+ YKQ+VP VSEN L ASG +EGRI+R +RF +L+ NYN DI FKD+E + A
Sbjct: 39 RQRKLTPMSYKQYVPGVSENNLGASGRAEGRITRSSERFNELVCNYNTDIDFKDEERSNA 98
Query: 106 DRLMTQ 111
DR MT+
Sbjct: 99 DRFMTK 104
>gi|190337424|gb|AAI63379.1| Desert hedgehog [Danio rerio]
gi|190338366|gb|AAI63355.1| Desert hedgehog [Danio rerio]
Length = 447
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 46 RYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGA 105
R +K+TP+ YKQ+VP VSEN L ASG +EGRI+R +RF +L+ NYN DI FKD+E + A
Sbjct: 39 RQRKLTPMSYKQYVPGVSENNLGASGRAEGRITRSSERFNELVCNYNTDIDFKDEERSNA 98
Query: 106 DRLMTQ 111
DR MT+
Sbjct: 99 DRFMTK 104
>gi|390275849|gb|AFL70713.1| hedgehog [Branchiostoma lanceolatum]
Length = 415
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 47/63 (74%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TP VYKQ +P VSENT ASG GRI+RD +RF L N+N DIIFKD+E TGADR
Sbjct: 42 KLTPFVYKQQMPAVSENTFGASGLFNGRITRDSERFHTLKQNFNTDIIFKDEEKTGADRF 101
Query: 109 MTQ 111
MTQ
Sbjct: 102 MTQ 104
>gi|193083627|gb|ACF10234.1| hedgehog [Branchiostoma lanceolatum]
Length = 415
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 47/63 (74%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TP VYKQ +P VSENT ASG GRI+RD +RF L N+N DIIFKD+E TGADR
Sbjct: 42 KLTPFVYKQQMPAVSENTFGASGLFNGRITRDSERFHTLKQNFNTDIIFKDEEKTGADRF 101
Query: 109 MTQ 111
MTQ
Sbjct: 102 MTQ 104
>gi|2369704|emb|CAA74169.1| AmphiHh protein [Branchiostoma floridae]
Length = 415
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 47/63 (74%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TP VYKQ +P VSENT ASG GRI+RD +RF L N+N DIIFKD+E TGADR
Sbjct: 42 KLTPFVYKQQMPAVSENTFGASGLFNGRITRDSERFHTLKQNFNTDIIFKDEEKTGADRF 101
Query: 109 MTQ 111
MTQ
Sbjct: 102 MTQ 104
>gi|190608762|gb|ACE79712.1| hedgehog [Branchiostoma lanceolatum]
Length = 415
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 47/63 (74%)
Query: 49 KITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRL 108
K+TP VYKQ +P VSENT ASG GRI+RD +RF L N+N DIIFKD+E TGADR
Sbjct: 42 KLTPFVYKQQMPAVSENTFGASGLFNGRITRDSERFHTLKQNFNTDIIFKDEEKTGADRF 101
Query: 109 MTQ 111
MTQ
Sbjct: 102 MTQ 104
>gi|47228684|emb|CAG07416.1| unnamed protein product [Tetraodon nigroviridis]
Length = 551
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G R R +K+ + YKQ PN+SEN L ASG +EG+I+R+ + F +L+ NYN
Sbjct: 27 CGPGPGYGIR--SRPRKLKAMHYKQFFPNLSENNLGASGRAEGKITRNSEHFNELVCNYN 84
Query: 93 QDIIFKDDEGTGADRLMTQ 111
DI+FKD+E T ADR MT+
Sbjct: 85 PDIVFKDEENTNADRFMTK 103
>gi|304651387|gb|ADM47604.1| sonic hedgehog [Callorhinchus milii]
Length = 281
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 50/59 (84%)
Query: 53 LVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
L YKQ++PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E +GADRLMTQ
Sbjct: 1 LAYKQYIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEEDSGADRLMTQ 59
>gi|291500851|gb|ADE08356.1| sonic hedgehog [Monodelphis domestica]
Length = 102
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 54 VYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
YKQ +PNV+E TL ASG EG+ISR+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 AYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 58
>gi|391342880|ref|XP_003745743.1| PREDICTED: sonic hedgehog protein-like [Metaseiulus occidentalis]
Length = 417
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/85 (56%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CG G RRR R K+TPLV KQ+VPNV E+T ASG G I R K F L+PNYN
Sbjct: 21 CGVGRVGFRRRPPR--KLTPLVIKQYVPNVGEHTDGASGPPRGPIVRYSKGFSRLVPNYN 78
Query: 93 QDIIFKDDEGTGADRLMTQ-LKNKM 116
+DI F DDEGTG DR+M+Q L++K+
Sbjct: 79 KDIQFADDEGTGVDRIMSQRLRDKL 103
>gi|4929272|gb|AAD33926.1|AF144100_1 sonic hedgehog [Bos taurus]
Length = 139
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 48/58 (82%)
Query: 54 VYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 AYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 58
>gi|21637395|gb|AAM70491.1|AF517943_1 hedgehog-like protein [Helobdella robusta]
Length = 1073
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
Query: 4 QEKKKKKKRKKKEKVY-ICVMCIVLRESMC----CGPGGKSGRRRYDRYKKITPLVYKQH 58
Q+ ++++ + Y + + +V+ + C CGPG R +K+TP V KQH
Sbjct: 176 QKSQRQRSLLTRPPFYAVLIFFLVVFDGRCFVGSCGPGRSYFSPRKGP-RKMTPFVLKQH 234
Query: 59 VPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
VPN+SE TL ASG EG++SR D F+ L+ N N +IIF++ EGTGADR+M++
Sbjct: 235 VPNLSETTLGASGQPEGKVSRGDPEFKKLVTNKNPNIIFQNSEGTGADRVMSK 287
>gi|198451270|ref|XP_001358303.2| GA18321 [Drosophila pseudoobscura pseudoobscura]
gi|198476984|ref|XP_002136818.1| GA29124 [Drosophila pseudoobscura pseudoobscura]
gi|257096610|sp|Q29AA9.2|HH_DROPS RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|198131411|gb|EAL27441.2| GA18321 [Drosophila pseudoobscura pseudoobscura]
gi|198145143|gb|EDY71847.1| GA29124 [Drosophila pseudoobscura pseudoobscura]
Length = 481
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 48/60 (80%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PLV KQ +PN+SE ASG EG I RD +F+DL+PNYN+DI+F+D+EGTGADRLMT+
Sbjct: 109 PLVLKQTIPNLSEYQTGASGPLEGEIKRDSPKFKDLVPNYNRDILFRDEEGTGADRLMTK 168
>gi|194742934|ref|XP_001953955.1| GF18029 [Drosophila ananassae]
gi|257096521|sp|B3LV44.1|HH_DROAN RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|190626992|gb|EDV42516.1| GF18029 [Drosophila ananassae]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PLV KQ +PN+SE T ASG EG I RD +F+DL+PNYN+DI+F+DDEGTGADRLM++
Sbjct: 100 PLVLKQTIPNLSEYTSGASGPLEGPIRRDSPKFKDLVPNYNRDILFRDDEGTGADRLMSK 159
>gi|195144126|ref|XP_002013047.1| GL23598 [Drosophila persimilis]
gi|257096525|sp|B4G2I8.1|HH_DROPE RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|194101990|gb|EDW24033.1| GL23598 [Drosophila persimilis]
Length = 481
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 48/60 (80%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PLV KQ +PN+SE ASG EG I RD +F+DL+PNYN+DI+F+D+EGTGADRLMT+
Sbjct: 109 PLVLKQTIPNLSEYQSGASGPLEGEIKRDSPKFKDLVPNYNRDILFRDEEGTGADRLMTK 168
>gi|171190134|gb|ACB42421.1| hedgehog [Lottia gigantea]
Length = 355
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G RR R +K TPLV+KQHVPNVSENTL ASG S+G+I R+ ++F++L+ N N DI+FK+
Sbjct: 1 GSRR--RPRKRTPLVFKQHVPNVSENTLGASGISDGKIRRNSEKFKNLVKNENPDIVFKN 58
Query: 100 DEGTGADRLMTQ 111
+EG G+D LM++
Sbjct: 59 EEGGGSDYLMSR 70
>gi|118138320|pdb|2IBG|E Chain E, Crystal Structure Of Hedgehog Bound To The Fniii Domains
Of Ihog
gi|118138321|pdb|2IBG|F Chain F, Crystal Structure Of Hedgehog Bound To The Fniii Domains
Of Ihog
gi|118138322|pdb|2IBG|G Chain G, Crystal Structure Of Hedgehog Bound To The Fniii Domains
Of Ihog
gi|118138323|pdb|2IBG|H Chain H, Crystal Structure Of Hedgehog Bound To The Fniii Domains
Of Ihog
Length = 150
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 51/62 (82%)
Query: 50 ITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLM 109
+ PLV KQ +PN+SE T +ASG EG I RD +F+DL+PNYN+DI+F+D+EGTGADRLM
Sbjct: 1 LYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVPNYNRDILFRDEEGTGADRLM 60
Query: 110 TQ 111
++
Sbjct: 61 SK 62
>gi|146186448|gb|ABQ09276.1| indian hedgehog a-like [Oryzias latipes]
Length = 152
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 46/57 (80%)
Query: 55 YKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
YKQ PNV+E TL ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 YKQFSPNVAEKTLGASGRPEGKITRSSERFKELTPNYNTDIIFKDEEDTGADRLMTQ 57
>gi|1731481|gb|AAB38565.1| shh, partial [Carassius auratus]
gi|1731483|gb|AAB38566.1| shh, partial [Devario aequipinnatus]
gi|1731485|gb|AAB38567.1| shh, partial [Danio aff. albolineatus]
gi|1731487|gb|AAB38568.1| shh, partial [Danio cf. tweediei]
gi|1731489|gb|AAB38569.1| shh, partial [Devario devario]
gi|1731491|gb|AAB38570.1| shh, partial [Danio rerio]
gi|1731493|gb|AAB38571.1| shh, partial [Danio kerri]
gi|1731495|gb|AAB38572.1| shh, partial [Devario malabaricus]
gi|1731497|gb|AAB38573.1| shh, partial [Danio pulcher]
gi|1731499|gb|AAB38574.1| shh, partial [Devario pathirana]
gi|1731501|gb|AAB38575.1| shh, partial [Danio rerio]
gi|1731503|gb|AAB38576.1| shh, partial [Pethia conchonius]
gi|1731505|gb|AAB38577.1| shh, partial [Systomus tetrazona]
gi|1731513|gb|AAB38581.1| shh, partial [Tanichthys albonubes]
Length = 63
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
GRRR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GRRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|195392182|ref|XP_002054738.1| GJ22641 [Drosophila virilis]
gi|257096528|sp|B4LZT9.1|HH_DROVI RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|194152824|gb|EDW68258.1| GJ22641 [Drosophila virilis]
Length = 483
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 47/60 (78%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PLV KQ VPN+SE ASG EG I RD F+DL+PNYN+DIIF+D+EGTGADRLM++
Sbjct: 109 PLVLKQTVPNLSEYMSGASGPIEGVIQRDSPNFKDLVPNYNRDIIFRDEEGTGADRLMSK 168
>gi|110659560|dbj|BAE98266.1| sonic hedgehog [Okamejei kenojei]
Length = 131
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 47/56 (83%)
Query: 56 KQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
KQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 KQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 56
>gi|6174986|sp|P79691.2|SHH_CARAU RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6175019|sp|P79850.2|SHH_PUNTE RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
GRRR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GRRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|6175016|sp|P79838.2|SHH_PUNCO RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
GRRR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GRRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|2896035|gb|AAC03108.1| hedgehog segment polarity homolog [Notophthalmus viridescens]
Length = 406
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 55 YKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
YKQ +P+V E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADR+MTQ
Sbjct: 45 YKQFLPHVPEKTLGASGRYEGKIARNSERFKELTPNYNPDIIFKDEENTGADRIMTQ 101
>gi|6175031|sp|P79915.2|SHH_TANAL RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
GRRR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GRRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|6174989|sp|O13235.2|SHH_DANAA RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6174992|sp|O13234.2|SHH_DANAE RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6174995|sp|O13238.2|SHH_DANAT RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6175001|sp|P79709.2|SHH_DANKE RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6175004|sp|P79717.2|SHH_DANAP RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6175007|sp|O13241.2|SHH_DEVDE RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6175010|sp|O13247.2|SHH_DEVMA RecName: Full=Sonic hedgehog protein; Short=SHH
gi|6175013|sp|O13250.2|SHH_DEVPA RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
GRRR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GRRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|1731507|gb|AAB38578.1| shh, partial [Rasbora elegans]
gi|1731509|gb|AAB38579.1| shh, partial [Trigonostigma heteromorpha]
Length = 63
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|1731511|gb|AAB38580.1| shh, partial [Rasbora paviana]
Length = 63
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GQRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|6175025|sp|P79864.2|SHH_TRIHE RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|56185694|gb|AAV84106.1| hedgehog [Euprymna scolopes]
Length = 395
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG G+RR R K TPLV+KQH+PNVSENT+ ASG+ EG+I+R + N N
Sbjct: 1 CGPGRGPGKRRGPR--KRTPLVFKQHIPNVSENTVGASGNYEGKITRSLNPGSTFVKNMN 58
Query: 93 QDIIFKDDEGTGADRLMTQ 111
IIF+D+E DR+M++
Sbjct: 59 PSIIFRDEENNDEDRMMSK 77
>gi|6175022|sp|P79858.2|SHH_RASEL RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GKRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|30918894|sp|P79869.2|SHH_RASPA RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 40 GRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKD 99
G+RR+ KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD
Sbjct: 2 GQRRHP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKD 59
Query: 100 DEGT 103
+E T
Sbjct: 60 EENT 63
>gi|355565196|gb|EHH21685.1| hypothetical protein EGK_04809, partial [Macaca mulatta]
Length = 363
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 55 YKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+KQ PNV E TL ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 HKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQ 57
>gi|56378273|dbj|BAD74242.1| sonic hedgehog [Pelodiscus sinensis]
Length = 138
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 59 VPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+PNV+E TL ASG EG+ISR+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 IPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 53
>gi|45581377|dbj|BAD12774.1| Hedgehog homologue [Lethenteron camtschaticum]
Length = 119
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 59 VPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
VPNV+E TL ASG EG+I+R +RF+DL PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 VPNVAEKTLGASGRYEGKIARGSERFKDLTPNYNPDIIFKDEENTGADRLMTQ 53
>gi|1731479|gb|AAB38564.1| shh, partial [Amblypharyngodon chulabhornae]
Length = 63
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGT 103
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E T
Sbjct: 8 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENT 63
>gi|354491044|ref|XP_003507666.1| PREDICTED: indian hedgehog protein [Cricetulus griseus]
Length = 370
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 60 PNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PNV E TL ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 13 PNVPEKTLGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQ 64
>gi|344255770|gb|EGW11874.1| Indian hedgehog protein [Cricetulus griseus]
Length = 918
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 60 PNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PNV E TL ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 561 PNVPEKTLGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQ 612
>gi|6174982|sp|P79682.2|SHH_AMBCH RecName: Full=Sonic hedgehog protein; Short=SHH
Length = 121
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGT 103
KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E T
Sbjct: 8 KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSERFKELTPNYNPDIIFKDEENT 63
>gi|345797551|ref|XP_545653.3| PREDICTED: LOW QUALITY PROTEIN: indian hedgehog protein [Canis
lupus familiaris]
Length = 413
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 32 CCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNY 91
CC RRR R + P KQ PNV E TL A G EG+I+R +RF++L PN
Sbjct: 30 CCPGRLVCSRRRPSR--XLGPHACKQFSPNVPEKTLGAIGRYEGKIARSSERFKELTPNS 87
Query: 92 NQDIIFKDDEGTGADRLMTQ 111
+ DIIFKD+E TGADRLMTQ
Sbjct: 88 DPDIIFKDEENTGADRLMTQ 107
>gi|339250542|ref|XP_003374256.1| desert hedgehog protein 2 [Trichinella spiralis]
gi|316969467|gb|EFV53561.1| desert hedgehog protein 2 [Trichinella spiralis]
Length = 423
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 1 MEKQEKKKK-----KKRKKKEKVYICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVY 55
ME + ++K +R++ Y+ ++ + CC SGR YKK PL+Y
Sbjct: 13 MESEVARRKVSVRASRRRQPCAGYVVLLVWAICVRSCCQGCASSGRMAGMAYKKYYPLIY 72
Query: 56 KQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMT 110
+ PN EN ++G +E RI R D F+ L+ N N DIIF+D+E TGADR+MT
Sbjct: 73 NERFPNEPENAPGSAGAAELRIRRSDPGFKRLVQNNNPDIIFRDEENTGADRMMT 127
>gi|126507453|gb|ABO15010.1| hedgehog protein [Trichinella spiralis]
Length = 445
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 1 MEKQEKKKK-----KKRKKKEKVYICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVY 55
ME + ++K +R++ Y+ ++ + CC SGR YKK PL+Y
Sbjct: 13 MESEVARRKVSVRASRRRQPCAGYVVLLVWAICVRSCCQGCASSGRMAGMAYKKYYPLIY 72
Query: 56 KQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMT 110
+ PN EN ++G +E RI R D F+ L+ N N DIIF+D+E TGADR+MT
Sbjct: 73 NERFPNEPENAPGSAGAAELRIRRSDPGFKRLVQNNNPDIIFRDEENTGADRMMT 127
>gi|158713835|gb|ABR57242.2| hedgehog-like protein [Sepia officinalis]
Length = 155
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADR 107
+K TPLV+KQH+PNVSENT+ ASG EG+I++ D RF+D++ N N I+F+D+E DR
Sbjct: 6 RKRTPLVFKQHIPNVSENTVGASGKYEGKITKPDPRFKDMVKNMNPSIVFRDEESNNEDR 65
Query: 108 LMTQ 111
+M++
Sbjct: 66 MMSK 69
>gi|4566673|gb|AAD23436.1| sonic hedgehog protein [Eleutherodactylus coqui]
Length = 138
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 44/53 (83%)
Query: 59 VPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+PNV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E T ADRLMTQ
Sbjct: 1 IPNVAEKTLGASGRYEGKITRNSERFKELTPNYNSDIIFKDEENTAADRLMTQ 53
>gi|195054796|ref|XP_001994309.1| GH23852 [Drosophila grimshawi]
gi|257096523|sp|B4JTF5.1|HH_DROGR RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|193896179|gb|EDV95045.1| GH23852 [Drosophila grimshawi]
Length = 479
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PLV KQ VPN+SE ASG EG I R +F+DL+P YN DI+F+D+EGTGADR+MT+
Sbjct: 100 PLVLKQTVPNLSEYQSGASGPLEGVIDRKSPKFKDLVPLYNSDILFRDEEGTGADRMMTK 159
Query: 112 -LKNKMPHYADS 122
K K+ A S
Sbjct: 160 RCKEKLVMLATS 171
>gi|4176772|gb|AAD08931.1| hedgehog protein [Junonia coenia]
Length = 185
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 68 TASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+ASG EGRI+RDD++FRDL+PNYN DI FKDDEGTGADRLMTQ
Sbjct: 2 SASGPPEGRITRDDEKFRDLVPNYNPDIDFKDDEGTGADRLMTQ 45
>gi|145586985|dbj|BAF56915.1| sonic hedgehog protein [Polypterus bichir]
Length = 420
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 22 VMCIVLRESMCCGPG---GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
+ ++ + CGPG K G + + I+ L P +E TL ASG EG+I+
Sbjct: 13 ISVFLVHSGVTCGPGRGFEKGGTPKSSPRQPISSLF-----PMCAEKTLGASGRYEGKIT 67
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ-LKNKMPHYADS 122
R +RF++L PNY DIIFKD+E TGADRLMTQ K+K+ A S
Sbjct: 68 RKSERFKELTPNYKPDIIFKDEENTGADRLMTQRCKDKLNSLAIS 112
>gi|74096315|ref|NP_001027635.1| hedgehog homolog 2 precursor [Ciona intestinalis]
gi|21929214|dbj|BAC06181.1| hedgehog homolog 2 [Ciona intestinalis]
Length = 402
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRIS 78
++CV ++ CG G + G R R + PL+ +Q+VP+VSE T+ ASG SEGRI
Sbjct: 14 FLCVYMVI-----SCGSGPRYGTRPNQR--NLRPLLRQQYVPHVSEGTIGASGPSEGRIY 66
Query: 79 RDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R+ R+R L NYN DI F+D E G+DR MT+
Sbjct: 67 RNTPRYRKLERNYNTDIEFEDRERDGSDRTMTK 99
>gi|46401364|gb|AAS92267.1| sonic hedgehog [Oncorhynchus mykiss]
Length = 130
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 61 NVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
NV+E TL ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 NVAEKTLGASGRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQ 51
>gi|195109931|ref|XP_001999535.1| GI24573 [Drosophila mojavensis]
gi|257096524|sp|B4K4M0.1|HH_DROMO RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|193916129|gb|EDW14996.1| GI24573 [Drosophila mojavensis]
Length = 476
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PLV KQ VPN+SE ASG EG I RD +F++L+ NYN+DI+F+D+EGTGADR+M++
Sbjct: 102 PLVLKQTVPNLSEYHNGASGPLEGVIHRDSPKFKNLVLNYNKDILFRDEEGTGADRVMSK 161
>gi|257051085|sp|P56674.4|HH_DROHY RecName: Full=Protein hedgehog; Contains: RecName: Full=Protein
hedgehog N-product; Contains: RecName: Full=Protein
hedgehog C-product; Flags: Precursor
gi|999397|gb|AAB34104.1| hedgehog hh protein homolog [Drosophila hydei, Peptide, 481 aa]
Length = 481
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PLV KQ VPN+SE +ASG EG I RD +F++L+ NYN+DI F+D+EGTGADR+M++
Sbjct: 107 PLVLKQTVPNLSEYHNSASGPLEGAIQRDSPKFKNLVLNYNRDIEFRDEEGTGADRVMSK 166
>gi|67003888|gb|AAY60839.1| hedgehog [Lampetra fluviatilis]
Length = 75
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 62 VSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
V+E TL ASG EG+I+R +RF+DL PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 VAEKTLGASGRYEGKIARGSERFKDLTPNYNPDIIFKDEENTGADRLMTQ 50
>gi|75260373|gb|ABA18188.1| sonic hedgehog [Felis catus]
Length = 50
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 48 KKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIF 97
KK+TPL YKQ +PNV+E TL ASG EG+ISR+ +RF++L PNYN DIIF
Sbjct: 1 KKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIF 50
>gi|54399709|gb|AAV34173.1| Shh [Bos taurus]
Length = 81
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Query: 23 MCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDK 82
MC + CGPG G+RR KK+TPL YKQ +PNV+E TL ASG EG+I+R+ +
Sbjct: 17 MC----SGLACGPGRGFGKRRNP--KKLTPLAYKQFIPNVAEKTLGASGRYEGKITRNSE 70
Query: 83 RFRDLIPNYN 92
RF++L PNYN
Sbjct: 71 RFKELTPNYN 80
>gi|156391243|ref|XP_001635678.1| predicted protein [Nematostella vectensis]
gi|156222774|gb|EDO43615.1| predicted protein [Nematostella vectensis]
gi|162424317|gb|ABX89897.1| hedgehog1 [Nematostella vectensis]
Length = 401
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 52 PLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
PL +KQ VP+V E +L ASG +G+I+R+ +F L+ YN DI+FKD+E TGADRLM++
Sbjct: 41 PLYFKQRVPDVDEFSLGASGRPQGKITRNSSKFNKLVACYNTDIVFKDEERTGADRLMSK 100
>gi|74096313|ref|NP_001027634.1| hedgehog homolog 1 [Ciona intestinalis]
gi|21929212|dbj|BAC06180.1| hedgehog homolog 1 [Ciona intestinalis]
Length = 557
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 30 SMC--CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFR-D 86
SMC C PG SG R +++ P + ++VP +SE T+ ASG GRI D RFR +
Sbjct: 125 SMCGACRPGHGSGGSRMPG-RELVPFLKGEYVPKMSEQTIGASGPVTGRIRADTPRFRQE 183
Query: 87 LIPNYNQDIIFKDDEGTGADRLMTQL 112
L+PN+N DI F+D+E + DR MT +
Sbjct: 184 LVPNWNTDIEFRDEEESNEDRFMTPI 209
>gi|301755725|ref|XP_002913740.1| PREDICTED: indian hedgehog protein-like, partial [Ailuropoda
melanoleuca]
Length = 356
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 67 LTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
L ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 6 LGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQ 50
>gi|281340215|gb|EFB15799.1| hypothetical protein PANDA_001534 [Ailuropoda melanoleuca]
Length = 351
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 67 LTASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
L ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 LGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQ 45
>gi|355750848|gb|EHH55175.1| hypothetical protein EGM_04327, partial [Macaca fascicularis]
Length = 349
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 69 ASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
ASG EG+I+R +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 ASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQ 43
>gi|210049951|dbj|BAG80693.1| sonic hedgehog protein [Neoceratodus forsteri]
Length = 131
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 69 ASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
ASG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 2 ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 44
>gi|311305999|gb|ADP89233.1| sonic hedgehog [Scyliorhinus canicula]
Length = 336
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 70 SGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
SG EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 SGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 42
>gi|46949093|gb|AAT07445.1| sonic hedgehog [Meriones unguiculatus]
Length = 277
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 36/42 (85%)
Query: 70 SGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+G EG+I+R+ +RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 3 AGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQ 44
>gi|300245034|gb|ADJ94110.1| sonic hedgehog, partial [Polypterus senegalus]
Length = 115
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 69 ASGHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
ASG EG+ +R+ +RF++L PNYN DIIFKD+E T ADRLMTQ
Sbjct: 1 ASGRYEGKTTRNSERFKELTPNYNPDIIFKDEENTAADRLMTQ 43
>gi|307335648|gb|ADN43394.1| desert hedgehog [Leporidae sp. JRA-2010]
Length = 175
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 32/36 (88%)
Query: 76 RISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R++R +RFRDL+PNYN DIIFKD+E TGADRLMT+
Sbjct: 1 RVARGSERFRDLVPNYNPDIIFKDEENTGADRLMTE 36
>gi|262357102|gb|ACY56484.1| sonic hedgehog [Sebastiscus marmoratus]
Length = 120
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 71 GHSEGRISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
G EG+I+R+ +R ++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 GRYEGKITRNSERSKELTPNYNTDIIFKDEENTGADRLMTQ 41
>gi|307335650|gb|ADN43395.1| desert hedgehog [Bos taurus]
Length = 175
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 76 RISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
R++R +RFRDL+PNYN DIIFKD+E +GADRLMT+
Sbjct: 1 RVTRGSERFRDLVPNYNPDIIFKDEENSGADRLMTE 36
>gi|307335652|gb|ADN43396.1| desert hedgehog [Sus scrofa]
Length = 174
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 77 ISRDDKRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
++R +RFRDL+PNYN DIIFKD+E +GADRLMT+
Sbjct: 1 VTRGSERFRDLVPNYNPDIIFKDEENSGADRLMTE 35
>gi|2440121|emb|CAA53923.1| indian hedgehog [Mus musculus]
Length = 336
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 82 KRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 ERFKELTPNYNPDIIFKDEENTGADRLMTQ 30
>gi|21700106|dbj|BAC02893.1| sonic hedgehog [Suncus murinus]
Length = 121
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 82 KRFRDLIPNYNQDIIFKDDEGTGADRLMTQ 111
+RF++L PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 ERFKELTPNYNPDIIFKDEENTGADRLMTQ 30
>gi|156393593|ref|XP_001636412.1| predicted protein [Nematostella vectensis]
gi|156223515|gb|EDO44349.1| predicted protein [Nematostella vectensis]
gi|162424319|gb|ABX89898.1| hedgehog2, partial [Nematostella vectensis]
Length = 376
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 CGPGGKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHSEGRISRDDKRFRDLIPNYN 92
CGPG + +DR + P+ ++H+P+ SE +L ASG S +I R +++LI N +
Sbjct: 1 CGPG----KAAFDRDNRAIPMKIREHIPDTSETSLQASGPSR-KIKRGSNGYKELITNAD 55
Query: 93 QDIIFKDDEGTGADRLMTQ 111
+I+F++D+ G +R M++
Sbjct: 56 PNIVFREDKA-GNNRRMSK 73
>gi|324120789|dbj|BAJ78784.1| hedgehog homologue protein [Lethenteron camtschaticum]
Length = 586
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/25 (80%), Positives = 23/25 (92%)
Query: 87 LIPNYNQDIIFKDDEGTGADRLMTQ 111
L PNYN D++FKD+EGTGADRLMTQ
Sbjct: 1 LTPNYNPDVVFKDEEGTGADRLMTQ 25
>gi|19919277|gb|AAM08228.1|AF393835_1 sonic hedgehog [Scyliorhinus canicula]
Length = 99
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 21/23 (91%)
Query: 89 PNYNQDIIFKDDEGTGADRLMTQ 111
PNYN DIIFKD+E TGADRLMTQ
Sbjct: 1 PNYNPDIIFKDEENTGADRLMTQ 23
>gi|355719257|gb|AES06540.1| sonic hedgehog-like protein [Mustela putorius furo]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 21/23 (91%)
Query: 89 PNYNQDIIFKDDEGTGADRLMTQ 111
PNYN DIIFKD+E +GADRLMTQ
Sbjct: 1 PNYNPDIIFKDEENSGADRLMTQ 23
>gi|77744722|gb|ABB02322.1| sonic hedgehog-like [Ovis aries]
Length = 64
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 90 NYNQDIIFKDDEGTGADRLMTQ 111
NYN DIIFKD+E TGADRLMTQ
Sbjct: 2 NYNPDIIFKDEENTGADRLMTQ 23
>gi|410046799|ref|XP_001145664.3| PREDICTED: desert hedgehog protein [Pan troglodytes]
Length = 282
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 6/42 (14%)
Query: 33 CGPG-GKSGRRRYDRYKKITPLVYKQHVPNVSENTLTASGHS 73
CGPG G GRRRY R K++ PL+YKQ VP + L + GHS
Sbjct: 23 CGPGRGPVGRRRYAR-KQLVPLLYKQFVPGI----LISPGHS 59
>gi|349802123|gb|AEQ16534.1| putative b chain of ihhn bound to bocfn3 [Pipa carvalhoi]
Length = 100
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 17/18 (94%)
Query: 94 DIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 1 DIIFKDEENTGADRLMTQ 18
>gi|4337450|gb|AAD18128.1| sonic hedgehog [Ambystoma mexicanum]
Length = 150
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 17/18 (94%)
Query: 94 DIIFKDDEGTGADRLMTQ 111
DIIFKD+E TGADRLMTQ
Sbjct: 1 DIIFKDEENTGADRLMTQ 18
>gi|2522199|gb|AAB80948.1| sonic hedgehog [Coturnix coturnix]
Length = 54
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 19 YICVMCIVLRESMCCGPGGKSGRRRYDRYKKITPLVYKQHVPNV 62
+IC + ++ + CGPG G+RR+ KK+TPL Y+ +P +
Sbjct: 15 FICAL--LVSSGLTCGPGRGIGKRRHP--KKLTPLAYRXFIPQL 54
>gi|5566317|gb|AAD45373.1| sonic hedgehog protein [Rattus norvegicus]
Length = 161
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 95 IIFKDDEGTGADRLMTQ 111
IIFKD+E TGADRLMTQ
Sbjct: 1 IIFKDEENTGADRLMTQ 17
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,073,180,793
Number of Sequences: 23463169
Number of extensions: 85651504
Number of successful extensions: 541488
Number of sequences better than 100.0: 355
Number of HSP's better than 100.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 540982
Number of HSP's gapped (non-prelim): 406
length of query: 122
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 33
effective length of database: 5,976,006,030
effective search space: 197208198990
effective search space used: 197208198990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)