BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4365
(1023 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C0Y2|YKL1_SCHPO Putative cell agglutination protein PB2C8.01 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB2C8.01 PE=3 SV=1
Length = 1220
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 201/763 (26%), Positives = 318/763 (41%), Gaps = 128/763 (16%)
Query: 148 TLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINK 205
TLD+A T+ GT+++ I GT T N TL+S + GT+
Sbjct: 126 TLDSANGTTPATIEVVEPAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEA 181
Query: 206 GTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINK 262
GT+++ + GT T GT+S GT+ GT+++ I GT T N
Sbjct: 182 GTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT 233
Query: 263 GTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRI 317
TL+S + GT+ GT+++ + GT T GT+S GT+
Sbjct: 234 -TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDT 287
Query: 318 NKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST--- 372
GT+++ I GT T N TL+S + GT+ GT+++ + GT T
Sbjct: 288 AAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTL 343
Query: 373 RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTR 430
GT+S GT+ GT+++ I GT T N TL+S + GT+
Sbjct: 344 ATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVE 394
Query: 431 INKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTR 487
GT+++ + GT T GT+S GT+ GT+++ I GT T
Sbjct: 395 PEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TP 446
Query: 488 INKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSS 542
N TL+S + GT+ GT+++ + GT T GT+S GT+
Sbjct: 447 FNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEV 500
Query: 543 TRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST 600
GT+++ I GT T N TL+S + GT+ GT+++ + GT T
Sbjct: 501 VDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYT 556
Query: 601 ---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLS 655
GT+S GT+ GT+++ I GT T N TL+S + GT+
Sbjct: 557 TTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVE 607
Query: 656 STRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 712
GT+++ + GT T GT+S GT+ GT+++ + GT
Sbjct: 608 VVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVIEPAAGTVTTTVYSGTQE 662
Query: 713 ST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKG 766
T GT+S GT+ GT++S + GT T GT+S G
Sbjct: 663 YTTTLATASGTVS-----GTVEVIEPAAGTVTSTVYSGTQEYTTTLATASGTVS-----G 712
Query: 767 TLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKG 823
T+ GT+++ + GT T GT+S GT+ GT+++ + G
Sbjct: 713 TVEVIEPAAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVIEPAAGTVTTTVYSG 767
Query: 824 TLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLR 864
+ + TL+S GT+ G++++ I G++
Sbjct: 768 ----SEVYTTTLASASESVPGTVEVVDPEAGSVTTTIYSGSVE 806
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 201/767 (26%), Positives = 319/767 (41%), Gaps = 124/767 (16%)
Query: 139 YRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINK 195
Y TTP TL +AT GT+ GT+++ + GT T GT+S
Sbjct: 153 YSGTTPFNTTLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS----- 207
Query: 196 GTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKG 253
GT+ GT+++ I GT T N TL+S + GT+ GT+++ + G
Sbjct: 208 GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSG 263
Query: 254 TLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN-- 308
T T GT+S GT+ GT+++ I GT T N TL+S +
Sbjct: 264 TQEYTTTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASATDTV 314
Query: 309 KGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRIN 365
GT+ GT+++ + GT T GT+S GT+ GT+++ I
Sbjct: 315 PGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDTAAGTVTTTIY 369
Query: 366 KGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSR 420
GT T N TL+S + GT+ GT+++ + GT T GT+S
Sbjct: 370 SGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-- 423
Query: 421 INKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRI 478
GT+ GT+++ I GT T N TL+S + GT+ GT+++ +
Sbjct: 424 ---GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTV 476
Query: 479 NKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 535
GT T GT+S GT+ GT+++ I GT T N TL+S
Sbjct: 477 YSGTQEYTTTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASAT 527
Query: 536 N--KGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSS 590
+ GT+ GT+++ + GT T GT+S GT+ GT+++
Sbjct: 528 DTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDTAAGTVTT 582
Query: 591 RINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST---RINKGTL 645
I GT T N TL+S + GT+ GT+++ + GT T GT+
Sbjct: 583 TIYSGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTV 638
Query: 646 SSRINKGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTL 702
S GT+ GT+++ + GT T GT+S GT+ GT+
Sbjct: 639 S-----GTVEVIEPAAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVIEPAAGTV 688
Query: 703 SSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSST---RINK 756
+S + GT T GT+S GT+ GT+++ + GT T
Sbjct: 689 TSTVYSGTQEYTTTLATASGTVS-----GTVEVIEPAAGTVTTTVYSGTQEYTTTLATAS 743
Query: 757 GTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKG 814
GT+S GT+ GT+++ + G + + TL+S GT+ G
Sbjct: 744 GTVS-----GTVEVIEPAAGTVTTTVYSG----SEVYTTTLASASESVPGTVEVVDPEAG 794
Query: 815 TLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG 861
++++ I G++ T + +S GT+ GT+++ + G
Sbjct: 795 SVTTTIYSGSVEYTTVLAD--ASGSVTGTVEVVEPAAGTVTTTVYSG 839
>sp|D2TV88|Y1121_CITRI Probable autotransporter ROD_p1121 OS=Citrobacter rodentium (strain
ICC168) GN=ROD_p1121 PE=1 SV=1
Length = 1593
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 205/705 (29%), Positives = 288/705 (40%), Gaps = 40/705 (5%)
Query: 159 TLSSTRINKGTLSSRINKG-TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTL 217
T + T IN G S R++ G + +ST IN G + G+ + T IN G + G+
Sbjct: 78 TATDTTINSGG-SQRVSSGGSATSTTINSGGFQYVSSGGSATDTTINSGGYQHVSSGGSA 136
Query: 218 SSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSST 277
+ T IN G S GT N G + TLS T IN S I G+ S+
Sbjct: 137 TDTTINSGGYLSVSGGGTAVDITQNSGGVIDTNTYATLSGTNING---SFSIVNGSASNM 193
Query: 278 RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRIN 337
+ G S +N ++T IN G S G+ N G S TLS T IN
Sbjct: 194 LLENGGFLSVLNGHQATNTTINSGGYLSVYGDGSAVDITQNSGGAISTDTSATLSGTNIN 253
Query: 338 KGTLSSRINKGTLSSTRI-NKGTLSSRINKGTLSS-TRINKGTLSSRINKGTLSSTRINK 395
S I G+ S+ + N+G L +N G ++ T IN G G+ + T IN
Sbjct: 254 G---SFSIAGGSASNMLLENRGQL--NVNSGHQATNTIINSGGNQHISGGGSATDTTINS 308
Query: 396 GTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTL 455
+ G+ +ST IN+G + ++ G+ ++T IN G S GT N G
Sbjct: 309 AGFQYVYSGGSATSTTINRGG-NQYVSGGSATNTTINSGGYLSVYGGGTAVDITQNSGGA 367
Query: 456 SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGTLSS-TRINKGTLS 513
TLS T IN S I G+ S+ + N G L +N G ++ T IN G
Sbjct: 368 IDTNTYATLSGTNING---SFSIAGGSASNMLLENGGYL--NVNSGHQATNTTINSGGGL 422
Query: 514 SRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSR 572
GT N G S TLS T IN S I G+ S+ + N G+L
Sbjct: 423 RVSGGGTAVDITQNSGGAISADTSATLSGTNING---SFSIANGSASNMLLENGGSL--Y 477
Query: 573 INKGTLSS-TRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN 631
+N G ++ T IN G GT N G TLS T IN S I
Sbjct: 478 VNSGHQATNTTINSGGGLRVSGGGTAVDITQNSGGAIDTNTYATLSGTNING---SFSIA 534
Query: 632 KGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGT 691
G+ S+ + G ++T IN G + S GT N G + T
Sbjct: 535 NGSASNMLLENGGYLYVDGGHQATNTTINSGGILSVSGGGTAVDITQNSGGVIDTNTYAT 594
Query: 692 LSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG--TLSSTRINKGTLSSRINKGTL 749
LS T IN S I G+ S+ + G +N G +++T N + + + G+
Sbjct: 595 LSGTNING---SFSIANGSASNMLLENGGF-LYVNSGHQAMNTTINNSRSTMNVLGGGSA 650
Query: 750 SSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSST 809
+ST IN G + G+ +ST IN G + G+ + T IN G S + GT
Sbjct: 651 TSTTINSGGYQYVSSGGSATSTTINSGGNQYVSSGGSATDTTINSGG-SLVVFDGTAVDI 709
Query: 810 RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTL 854
N G + TLS T IN S I G+ S+ + +G+L
Sbjct: 710 TQNSGGAITADTSATLSGTNING---SFSIANGSASNMLLERGSL 751
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 214/760 (28%), Positives = 313/760 (41%), Gaps = 83/760 (10%)
Query: 159 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 218
TLS T IN S I G+ S+ + G S +N ++T IN G S G+
Sbjct: 173 TLSGTNING---SFSIVNGSASNMLLENGGFLSVLNGHQATNTTINSGGYLSVYGDGSAV 229
Query: 219 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGTLSS- 276
N G S TLS T IN S I G+ S+ + N+G L +N G ++
Sbjct: 230 DITQNSGGAISTDTSATLSGTNING---SFSIAGGSASNMLLENRGQL--NVNSGHQATN 284
Query: 277 TRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRI 336
T IN G G+ + T IN + G+ +ST IN+G + ++ G+ ++T I
Sbjct: 285 TIINSGGNQHISGGGSATDTTINSAGFQYVYSGGSATSTTINRGG-NQYVSGGSATNTTI 343
Query: 337 NKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINK------GTLSSRI--NKGTL 388
N G S GT N G TLS T IN G+ S+ + N G L
Sbjct: 344 NSGGYLSVYGGGTAVDITQNSGGAIDTNTYATLSGTNINGSFSIAGGSASNMLLENGGYL 403
Query: 389 --------SSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 440
++T IN G GT N G S TLS T IN S I
Sbjct: 404 NVNSGHQATNTTINSGGGLRVSGGGTAVDITQNSGGAISADTSATLSGTNING---SFSI 460
Query: 441 NKGTLSSTRI-NKGTLSSRINKGTLSS-TRINKGTLSSRINKGTLSSTRINKGTLSSRIN 498
G+ S+ + N G+L +N G ++ T IN G GT N G
Sbjct: 461 ANGSASNMLLENGGSL--YVNSGHQATNTTINSGGGLRVSGGGTAVDITQNSGGAIDTNT 518
Query: 499 KGTLSSTRIN------KGTLSSRI--NKGTL--------SSTRINKGTLSSRINKGTLSS 542
TLS T IN G+ S+ + N G L ++T IN G + S GT
Sbjct: 519 YATLSGTNINGSFSIANGSASNMLLENGGYLYVDGGHQATNTTINSGGILSVSGGGTAVD 578
Query: 543 TRINKGTLSSRINKGTLSSTRIN------KGTLSSRI--NKGTLSSTRINKG--TLSSRI 592
N G + TLS T IN G+ S+ + N G L +N G +++ I
Sbjct: 579 ITQNSGGVIDTNTYATLSGTNINGSFSIANGSASNMLLENGGFL---YVNSGHQAMNTTI 635
Query: 593 NK----------GTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINK 642
N G+ +ST IN G + G+ +ST IN G + G+ + T IN
Sbjct: 636 NNSRSTMNVLGGGSATSTTINSGGYQYVSSGGSATSTTINSGGNQYVSSGGSATDTTINS 695
Query: 643 GTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTL 702
G S + GT N G + TLS T IN S I G+ S+ + +G+L
Sbjct: 696 GG-SLVVFDGTAVDITQNSGGAITADTSATLSGTNING---SFSIANGSASNMLLERGSL 751
Query: 703 SSRINKGTLSS-TRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSS 761
+ G ++ T IN G G+ ++T IN G G+++ST +N G +
Sbjct: 752 --YVEGGHQATNTTINGGGSMDVSTDGSATNTTINDGGQMYVSTDGSVTSTIVNIGGFVN 809
Query: 762 RINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN 821
+ G+ + T +N+G +G+ + T IN+G + ++T IN G S ++
Sbjct: 810 LL-GGSATDTTLNEGGRMLVNPQGSATGTIINRGGYQEILRSAGAANTIINGGQ-QSVLS 867
Query: 822 KGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG 861
G+ + T +N G N G+ + T +N G + IN G
Sbjct: 868 GGSATDTTLNSGGAQYINNGGSATDTTLNSGG-AQYINNG 906
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 218/511 (42%), Gaps = 22/511 (4%)
Query: 292 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 351
TLS T IN S I G+ S+ + G ++T IN G + S GT
Sbjct: 521 TLSGTNING---SFSIANGSASNMLLENGGYLYVDGGHQATNTTINSGGILSVSGGGTAV 577
Query: 352 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG--TLSS 409
N G + TLS T IN S I G+ S+ + G +N G +++
Sbjct: 578 DITQNSGGVIDTNTYATLSGTNING---SFSIANGSASNMLLENGGFL-YVNSGHQAMNT 633
Query: 410 TRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRI 469
T N + + + G+ +ST IN G + G+ +ST IN G + G+ + T I
Sbjct: 634 TINNSRSTMNVLGGGSATSTTINSGGYQYVSSGGSATSTTINSGGNQYVSSGGSATDTTI 693
Query: 470 NKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKG 529
N G S + GT N G + TLS T IN S I G+ S+ + +G
Sbjct: 694 NSGG-SLVVFDGTAVDITQNSGGAITADTSATLSGTNING---SFSIANGSASNMLLERG 749
Query: 530 TLSSRINKGTLSS-TRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTL 588
+L + G ++ T IN G G+ ++T IN G G+++ST +N G
Sbjct: 750 SL--YVEGGHQATNTTINGGGSMDVSTDGSATNTTINDGGQMYVSTDGSVTSTIVNIGGF 807
Query: 589 SSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSR 648
+ + G+ + T +N+G +G+ + T IN+G + ++T IN G S
Sbjct: 808 VNLL-GGSATDTTLNEGGRMLVNPQGSATGTIINRGGYQEILRSAGAANTIINGGQ-QSV 865
Query: 649 INKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINK 708
++ G+ + T +N G N G+ + T +N G N G++++T IN G
Sbjct: 866 LSGGSATDTTLNSGGAQYINNGGSATDTTLNSGGAQYINNGGSVTNTTINSGGGQYVYIN 925
Query: 709 GTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTL 768
G ++ T I G + G+ S N G LS T +KGT S I G+
Sbjct: 926 GNVTKTTITDGGILQVDAGGSASQVTQNSGGAIVTNTSAVLSGTN-DKGTFS--IAGGSA 982
Query: 769 SSTRI-NKGTLSSRINKGTLSSTRINKGTLS 798
S+ + N G L+ + +T + GTLS
Sbjct: 983 SNMSLENGGLLTVLVGHDASDTTVGSDGTLS 1013
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 202/469 (43%), Gaps = 19/469 (4%)
Query: 182 TRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRI 241
T IN G + S GT N G + TLS T IN S I G+ S+ +
Sbjct: 560 TTINSGGILSVSGGGTAVDITQNSGGVIDTNTYATLSGTNING---SFSIANGSASNMLL 616
Query: 242 NKGTLSSRINKG--TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRIN 299
G +N G +++T N + + + G+ +ST IN G + G+ +ST IN
Sbjct: 617 ENGGFL-YVNSGHQAMNTTINNSRSTMNVLGGGSATSTTINSGGYQYVSSGGSATSTTIN 675
Query: 300 KGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGT 359
G + G+ + T IN G S + GT N G + TLS T IN
Sbjct: 676 SGGNQYVSSGGSATDTTINSGG-SLVVFDGTAVDITQNSGGAITADTSATLSGTNING-- 732
Query: 360 LSSRINKGTLSSTRINKGTLSSRINKGTLSS-TRINKGTLSSRINKGTLSSTRINKGTLS 418
S I G+ S+ + +G+L + G ++ T IN G G+ ++T IN G
Sbjct: 733 -SFSIANGSASNMLLERGSL--YVEGGHQATNTTINGGGSMDVSTDGSATNTTINDGGQM 789
Query: 419 SRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 478
G+++ST +N G + + G+ + T +N+G +G+ + T IN+G +
Sbjct: 790 YVSTDGSVTSTIVNIGGFVNLL-GGSATDTTLNEGGRMLVNPQGSATGTIINRGGYQEIL 848
Query: 479 NKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG 538
++T IN G S ++ G+ + T +N G N G+ + T +N G N G
Sbjct: 849 RSAGAANTIINGGQ-QSVLSGGSATDTTLNSGGAQYINNGGSATDTTLNSGGAQYINNGG 907
Query: 539 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 598
++++T IN G G ++ T I G + G+ S N G LS
Sbjct: 908 SVTNTTINSGGGQYVYINGNVTKTTITDGGILQVDAGGSASQVTQNSGGAIVTNTSAVLS 967
Query: 599 STRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGTLSSTRINKGTLS 646
T +KGT S I G+ S+ + N G L+ + +T + GTLS
Sbjct: 968 GTN-DKGTFS--IAGGSASNMSLENGGLLTVLVGHDASDTTVGSDGTLS 1013
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 177/412 (42%), Gaps = 30/412 (7%)
Query: 92 YLNKGHWRLSEALNISNYLNYVFGGGRTPYPSDGRSPSPTSEVGYGSYR-------STTP 144
Y+N GH ++ +N S V GGG + ++ + G Y+ +T+
Sbjct: 623 YVNSGHQAMNTTINNSRSTMNVLGGGS----------ATSTTINSGGYQYVSSGGSATST 672
Query: 145 SIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRIN 204
+I + N + G+ + T IN G S + GT N G + TLS T IN
Sbjct: 673 TINSGGNQYVSSGGSATDTTINSGG-SLVVFDGTAVDITQNSGGAITADTSATLSGTNIN 731
Query: 205 KGTLSSRINKGTLSSTRINKGTLSSRINKGTLSS-TRINKGTLSSRINKGTLSSTRINKG 263
S I G+ S+ + +G+L + G ++ T IN G G+ ++T IN G
Sbjct: 732 G---SFSIANGSASNMLLERGSL--YVEGGHQATNTTINGGGSMDVSTDGSATNTTINDG 786
Query: 264 TLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLS 323
G+++ST +N G + + G+ + T +N+G +G+ + T IN+G
Sbjct: 787 GQMYVSTDGSVTSTIVNIGGFVNLL-GGSATDTTLNEGGRMLVNPQGSATGTIINRGGYQ 845
Query: 324 SRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 383
+ ++T IN G S ++ G+ + T +N G N G+ + T +N G
Sbjct: 846 EILRSAGAANTIINGGQ-QSVLSGGSATDTTLNSGGAQYINNGGSATDTTLNSGGAQYIN 904
Query: 384 NKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG 443
N G++++T IN G G ++ T I G + G+ S N G
Sbjct: 905 NGGSVTNTTINSGGGQYVYINGNVTKTTITDGGILQVDAGGSASQVTQNSGGAIVTNTSA 964
Query: 444 TLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGTLSSTRINKGTLS 494
LS T +KGT S I G+ S+ + N G L+ + +T + GTLS
Sbjct: 965 VLSGTN-DKGTFS--IAGGSASNMSLENGGLLTVLVGHDASDTTVGSDGTLS 1013
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 72/171 (42%), Gaps = 6/171 (3%)
Query: 684 SSRINKG-TLSSTRINKGTLSSRINKG-TLSSTRINKGTLSSRINKGTLSSTRINKGTLS 741
S +N G T + T IN G S R++ G + +ST IN G + G+ + T IN G
Sbjct: 70 SMSLNAGDTATDTTINSGG-SQRVSSGGSATSTTINSGGFQYVSSGGSATDTTINSGGYQ 128
Query: 742 SRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 801
+ G+ + T IN G S GT N G + TLS T IN S I
Sbjct: 129 HVSSGGSATDTTINSGGYLSVSGGGTAVDITQNSGGVIDTNTYATLSGTNING---SFSI 185
Query: 802 NKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKG 852
G+ S+ + G S +N ++T IN G S G+ N G
Sbjct: 186 VNGSASNMLLENGGFLSVLNGHQATNTTINSGGYLSVYGDGSAVDITQNSG 236
>sp|Q9FZ35|PRP1_ARATH Proline-rich protein 1 OS=Arabidopsis thaliana GN=PRP1 PE=2 SV=1
Length = 335
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 162 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 215
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 216 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 275
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 276 STRINKGTLSSRINKGTLSSTRINKGTL 303
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 181 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 234
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 235 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 294
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 295 STRINKGTLSSRINKGTLSSTRINKGTL 322
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 200 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 253
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 254 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 313
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 314 STRINKGTLSSRINKGTLSSTRINKGTL 341
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 219 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 272
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 273 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 332
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 333 STRINKGTLSSRINKGTLSSTRINKGTL 360
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 238 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 291
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 292 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 351
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 352 STRINKGTLSSRINKGTLSSTRINKGTL 379
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 257 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 310
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 311 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 370
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 371 STRINKGTLSSRINKGTLSSTRINKGTL 398
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 276 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 329
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 330 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 389
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 390 STRINKGTLSSRINKGTLSSTRINKGTL 417
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 295 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 348
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 349 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 408
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 409 STRINKGTLSSRINKGTLSSTRINKGTL 436
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 314 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 367
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 368 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 427
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 428 STRINKGTLSSRINKGTLSSTRINKGTL 455
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 333 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 386
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 387 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 446
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 447 STRINKGTLSSRINKGTLSSTRINKGTL 474
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 352 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 405
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 406 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 465
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 466 STRINKGTLSSRINKGTLSSTRINKGTL 493
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 371 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 424
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 425 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 484
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 485 STRINKGTLSSRINKGTLSSTRINKGTL 512
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 390 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 443
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 444 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 503
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 504 STRINKGTLSSRINKGTLSSTRINKGTL 531
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 409 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 462
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 463 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 522
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 523 STRINKGTLSSRINKGTLSSTRINKGTL 550
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 428 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 481
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 482 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 541
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 542 STRINKGTLSSRINKGTLSSTRINKGTL 569
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 447 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 500
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 501 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 560
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 561 STRINKGTLSSRINKGTLSSTRINKGTL 588
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 466 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 519
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 520 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 579
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 580 STRINKGTLSSRINKGTLSSTRINKGTL 607
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 485 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 538
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 539 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 598
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 599 STRINKGTLSSRINKGTLSSTRINKGTL 626
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 504 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 557
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 558 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 617
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 618 STRINKGTLSSRINKGTLSSTRINKGTL 645
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 523 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 576
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 577 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 636
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 637 STRINKGTLSSRINKGTLSSTRINKGTL 664
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 542 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 595
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 596 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 655
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 656 STRINKGTLSSRINKGTLSSTRINKGTL 683
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 561 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 614
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 615 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 674
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 675 STRINKGTLSSRINKGTLSSTRINKGTL 702
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 580 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 633
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 634 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 693
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 694 STRINKGTLSSRINKGTLSSTRINKGTL 721
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 599 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 652
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 653 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 712
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 713 STRINKGTLSSRINKGTLSSTRINKGTL 740
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 618 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 671
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 672 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 731
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 732 STRINKGTLSSRINKGTLSSTRINKGTL 759
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 637 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 690
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 691 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 750
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 751 STRINKGTLSSRINKGTLSSTRINKGTL 778
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 656 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 709
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 710 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 769
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 770 STRINKGTLSSRINKGTLSSTRINKGTL 797
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 675 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 728
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 729 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 788
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 789 STRINKGTLSSRINKGTLSSTRINKGTL 816
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 694 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 747
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 748 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 807
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 808 STRINKGTLSSRINKGTLSSTRINKGTL 835
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 713 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 766
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 767 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 826
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 827 STRINKGTLSSRINKGTLSSTRINKGTL 854
NK +LS + K TLS K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 139 YRSTTPSIFTLDNATSDNEGTLS----STRINKGTL-----SSRINKGTLSSTRINKGTL 189
Y ++P ++T + N+ TL + ++K TL + ++K TLS K TL
Sbjct: 25 YAPSSPPVYT----SPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTL 80
Query: 190 SSRI------NKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINK 243
NK TL + + + K TLS K TL + K TLS K
Sbjct: 81 PPPAYTPPVYNKPTLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTK 135
Query: 244 GTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTL 284
TLS + K TLS NK +LS + K TLS K TL
Sbjct: 136 PTLSPTVYKPTLSPPVNNKPSLSPPVYKPTLSPPVYTKPTL 176
Score = 35.0 bits (79), Expect = 2.8, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 732 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI------NKG 785
++ +NK TL + + + + ++K TLS K TL NK
Sbjct: 34 TSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKP 93
Query: 786 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 845
TL + + + K TLS K TL + K TLS K TLS + K TLS
Sbjct: 94 TLPAP-----VYTPPVYKPTLSPPVYTKPTLLPPVFKPTLSPPVYTKPTLSPTVYKPTLS 148
Query: 846 STRINKGTLSSRINKGTL 863
NK +LS + K TL
Sbjct: 149 PPVNNKPSLSPPVYKPTL 166
>sp|Q79FW4|PPE12_MYCTU Uncharacterized PPE family protein PPE12 OS=Mycobacterium
tuberculosis GN=ppe12 PE=3 SV=1
Length = 645
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 131 TSEVGYGSYRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRI-NKGTLSSTRINKGTL 189
++++G+G S + +I N+ + N G +S N G +S + N G +S IN G
Sbjct: 360 SNQIGFGGLNSGSGNI-GFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFG 418
Query: 190 -SSRINKGTLSSTRINKGTL-SSRINKGTLSSTRINKGTLSSR-INKGTLSSTRINKGTL 246
S IN G ++ +N G S + N G ++ N G + IN G+ +S N G+
Sbjct: 419 NSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSF 478
Query: 247 -SSRINKGTLSSTRINKGTL-SSRINKGTLSSTRINKG 282
N G L+S N G S IN G ++ +N G
Sbjct: 479 NGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTG 516
>sp|Q03155|AIDA_ECOLX AIDA-I autotransporter OS=Escherichia coli GN=aidA-I PE=1 SV=1
Length = 1286
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 215/524 (41%), Gaps = 42/524 (8%)
Query: 371 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTR 430
ST +N G + R++ G ++S G + N G S+T I G + + G ST
Sbjct: 116 STIVNSGGIQ-RVSSGGVASATNLSGGAQNIYNLGHASNTVIFSGGNQTIFSGGITDSTN 174
Query: 431 INKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGT-LSSTRIN 489
I+ G + G S+T IN + +++ ST I+ G + I+ G + T +N
Sbjct: 175 ISSGGQQRVSSGGVASNTTINSSGAQNILSEEGAISTHISSGG-NQYISAGANATETIVN 233
Query: 490 KGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGT 549
G R+N G +++ + G + + G+ ST + + + T++ T +N G
Sbjct: 234 SGGFQ-RVNSGAVATGTVLSGGTQNVSSGGSAISTSVYNSGVQTVFAGATVTDTTVNSGG 292
Query: 550 LSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN-KGTLSSTRINKGTLS 608
+ + G +S T +N + + G+ S I KG S +N +GT +T ++ G
Sbjct: 293 NQNISSGGIVSETTVNVSGTQNIYSGGSALSANI-KG--SQIVNSEGTAINTLVSDGGYQ 349
Query: 609 SRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 668
N G S T +N+ + + G ST IN G ++ G T +N +
Sbjct: 350 HIRNGGIASGTIVNQSGYVNISSGGYAESTIINSGGTLRVLSDGYARGTILNNSGRENVS 409
Query: 669 NKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG-------------TLSSTR 715
N G + IN G + G ++ +N RIN G T+SS
Sbjct: 410 NGGVSYNAMINTGGNQYIYSDGEATAAIVNTSGFQ-RINSGGTAPVQNSVVVTRTVSSAA 468
Query: 716 INKGTLSSRINKGTLSSTRINKGTLSSR-------INKGTLSSTRINKGTLSSRINK--G 766
+ + G + + +G S + GT S +N LS R+N G
Sbjct: 469 K---PFDAEVYSGGKQTVYLWRGIWYSNFLTAVWSMFPGTASGANVN---LSGRLNAFAG 522
Query: 767 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 826
+ T +N+ + T +ST N ++ G T +N G L + + G S
Sbjct: 523 NVVGTILNQEGRQYVYSGATATSTVGNNEGREYVLSGGITDGTVLNSGGLQAVSSGGKAS 582
Query: 827 STRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKG--TLRIGL 867
+T IN+G + G ++ T I N GT+ R++ G L I L
Sbjct: 583 ATVINEGGAQFVYDGGQVTGTNIKNGGTI--RVDSGASALNIAL 624
Score = 33.9 bits (76), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 212/516 (41%), Gaps = 40/516 (7%)
Query: 200 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTR 259
ST +N G + R++ G ++S G + N G S+T I G + + G ST
Sbjct: 116 STIVNSGGI-QRVSSGGVASATNLSGGAQNIYNLGHASNTVIFSGGNQTIFSGGITDSTN 174
Query: 260 INKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGT-LSSTRIN 318
I+ G + G S+T IN + +++ ST I+ G + I+ G + T +N
Sbjct: 175 ISSGGQQRVSSGGVASNTTINSSGAQNILSEEGAISTHISSGG-NQYISAGANATETIVN 233
Query: 319 KGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGT 378
G R+N G +++ + G + + G+ ST + + + T++ T +N G
Sbjct: 234 SGGF-QRVNSGAVATGTVLSGGTQNVSSGGSAISTSVYNSGVQTVFAGATVTDTTVNSGG 292
Query: 379 LSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN-KGTLSSTRINKGTLS 437
+ + G +S T +N + + G+ S I KG S +N +GT +T ++ G
Sbjct: 293 NQNISSGGIVSETTVNVSGTQNIYSGGSALSANI-KG--SQIVNSEGTAINTLVSDGGYQ 349
Query: 438 SRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 497
N G S T +N+ + + G ST IN G ++ G T +N +
Sbjct: 350 HIRNGGIASGTIVNQSGYVNISSGGYAESTIINSGGTLRVLSDGYARGTILNNSGRENVS 409
Query: 498 NKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG-------------TLSSTR 544
N G + IN G + G ++ +N RIN G T+SS
Sbjct: 410 NGGVSYNAMINTGGNQYIYSDGEATAAIVNTSGF-QRINSGGTAPVQNSVVVTRTVSSAA 468
Query: 545 INKGTLSSRINKGTLSSTRINKGTLSSR-------INKGTLSSTRINKGTLSSRIN--KG 595
+ + G + + +G S + GT S +N LS R+N G
Sbjct: 469 K---PFDAEVYSGGKQTVYLWRGIWYSNFLTAVWSMFPGTASGANVN---LSGRLNAFAG 522
Query: 596 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 655
+ T +N+ + T +ST N ++ G T +N G L + + G S
Sbjct: 523 NVVGTILNQEGRQYVYSGATATSTVGNNEGREYVLSGGITDGTVLNSGGLQAVSSGGKAS 582
Query: 656 STRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKG 690
+T IN+G + G ++ T I N GT+ R++ G
Sbjct: 583 ATVINEGGAQFVYDGGQVTGTNIKNGGTI--RVDSG 616
Score = 33.9 bits (76), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 212/516 (41%), Gaps = 40/516 (7%)
Query: 276 STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTR 335
ST +N G + R++ G ++S G + N G S+T I G + + G ST
Sbjct: 116 STIVNSGGIQ-RVSSGGVASATNLSGGAQNIYNLGHASNTVIFSGGNQTIFSGGITDSTN 174
Query: 336 INKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGT-LSSTRIN 394
I+ G + G S+T IN + +++ ST I+ G + I+ G + T +N
Sbjct: 175 ISSGGQQRVSSGGVASNTTINSSGAQNILSEEGAISTHISSGG-NQYISAGANATETIVN 233
Query: 395 KGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGT 454
G R+N G +++ + G + + G+ ST + + + T++ T +N G
Sbjct: 234 SGGFQ-RVNSGAVATGTVLSGGTQNVSSGGSAISTSVYNSGVQTVFAGATVTDTTVNSGG 292
Query: 455 LSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN-KGTLSSTRINKGTLS 513
+ + G +S T +N + + G+ S I KG S +N +GT +T ++ G
Sbjct: 293 NQNISSGGIVSETTVNVSGTQNIYSGGSALSANI-KG--SQIVNSEGTAINTLVSDGGYQ 349
Query: 514 SRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRI 573
N G S T +N+ + + G ST IN G ++ G T +N +
Sbjct: 350 HIRNGGIASGTIVNQSGYVNISSGGYAESTIINSGGTLRVLSDGYARGTILNNSGRENVS 409
Query: 574 NKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKG-------------TLSSTR 620
N G + IN G + G ++ +N RIN G T+SS
Sbjct: 410 NGGVSYNAMINTGGNQYIYSDGEATAAIVNTSGFQ-RINSGGTAPVQNSVVVTRTVSSAA 468
Query: 621 INKGTLSSRINKGTLSSTRINKGTLSSR-------INKGTLSSTRINKGTLSSRINK--G 671
+ + G + + +G S + GT S +N LS R+N G
Sbjct: 469 K---PFDAEVYSGGKQTVYLWRGIWYSNFLTAVWSMFPGTASGANVN---LSGRLNAFAG 522
Query: 672 TLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 731
+ T +N+ + T +ST N ++ G T +N G L + + G S
Sbjct: 523 NVVGTILNQEGRQYVYSGATATSTVGNNEGREYVLSGGITDGTVLNSGGLQAVSSGGKAS 582
Query: 732 STRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKG 766
+T IN+G + G ++ T I N GT+ R++ G
Sbjct: 583 ATVINEGGAQFVYDGGQVTGTNIKNGGTI--RVDSG 616
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.331
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 290,183,298
Number of Sequences: 539616
Number of extensions: 10947790
Number of successful extensions: 36019
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 30709
Number of HSP's gapped (non-prelim): 2325
length of query: 1023
length of database: 191,569,459
effective HSP length: 128
effective length of query: 895
effective length of database: 122,498,611
effective search space: 109636256845
effective search space used: 109636256845
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)