RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy4369
         (71 letters)



>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural
          genomics, NPPSFA, national project on protein
          structural and functional analyses; NMR {Homo sapiens}
          SCOP: g.37.1.1
          Length = 88

 Score = 25.6 bits (55), Expect = 1.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 31 DRALQRLVDSTPEINNHSDTQERVTPRLDRRKRTVSRQ 68
          D  LQ   + T  +N H++  ++   R +RRK+ +S+Q
Sbjct: 32 DSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLLSKQ 69


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.322    0.133    0.383 

Gapped
Lambda     K      H
   0.267   0.0841    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,004,259
Number of extensions: 44204
Number of successful extensions: 81
Number of sequences better than 10.0: 1
Number of HSP's gapped: 81
Number of HSP's successfully gapped: 3
Length of query: 71
Length of database: 6,701,793
Length adjustment: 41
Effective length of query: 30
Effective length of database: 5,557,032
Effective search space: 166710960
Effective search space used: 166710960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.2 bits)