BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy437
(184 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL Y+++PKK + + E+ +LIK KY QSGIVYCL+RKECD+ A + E
Sbjct: 640 FLSSFNRPNLLYKVVPKKGKSAMAEIANLIKEKYKNQSGIVYCLSRKECDNTATYMCNEG 699
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I AISYHAGL+D RN+VQMKWI+NKV++
Sbjct: 700 IKAISYHAGLSDPKRNDVQMKWITNKVNL 728
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL Y+++PKK + + E+ +LIK KY QSGIVYCL+RKECD+ A + E
Sbjct: 640 FLSSFNRPNLLYKVVPKKGKSAMAEIANLIKEKYKNQSGIVYCLSRKECDNTATYMCNEG 699
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I AISYHAGL+D RN+VQMKWI+NKV++
Sbjct: 700 IKAISYHAGLSDPKRNDVQMKWITNKVNL 728
>gi|328707887|ref|XP_001947908.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1128
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 52/89 (58%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL YE++PKK + L E+ LIK+K++ QSGI+YC+T+KECD+ A ++ E
Sbjct: 584 FVSSFNRPNLVYEVIPKKGKSSLLEIAKLIKSKFARQSGIIYCMTKKECDNTAIFMSGEG 643
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+SYHAGL DK RN+VQM+W SNK +V
Sbjct: 644 IKAVSYHAGLTDKKRNDVQMQWTSNKSNV 672
>gi|321478461|gb|EFX89418.1| DNA helicase bloom's syndrome protein A [Daphnia pulex]
Length = 1276
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+SSFNR NLKY +LPKK VL E+ LI ++ +SGIVYCL+R+ECD VA +L
Sbjct: 700 FLSSFNRPNLKYCVLPKKMKAGVLTEIAELITKRFDRKSGIVYCLSRRECDEVAQSLQSS 759
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI AISYHAGL+D+LR+E Q+KWI+ V V
Sbjct: 760 RIKAISYHAGLSDELRSESQLKWINGTVQV 789
>gi|443726019|gb|ELU13361.1| hypothetical protein CAPTEDRAFT_91032 [Capitella teleta]
Length = 579
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+ SFNR NLKYE+LPKK ++ +VI++I +++S QSGIVYCL+R+ECD+V+ L +
Sbjct: 199 FMQSFNRVNLKYEVLPKKPKSLTSDVINMIHSRFSNQSGIVYCLSRRECDTVSTDLTKAG 258
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
I A +YHAGL D R+ VQ KW++
Sbjct: 259 IQAKAYHAGLTDAQRSSVQQKWLN 282
>gi|330932861|ref|XP_003303943.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
gi|311319743|gb|EFQ87962.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
Length = 1750
Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
+ SFNR NL YE+LPK K V+ + LIK KY+G+SGI+YCL+RK C+ VA L++ I
Sbjct: 1041 YSQSFNRPNLSYEVLPKGKGVINSIADLIKEKYTGKSGIIYCLSRKTCEQVAQKLSETGI 1100
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R+EVQ KW N+ HV
Sbjct: 1101 RAYHYHAGMDSADRSEVQRKWQKNEYHV 1128
>gi|324502420|gb|ADY41066.1| Bloom syndrome protein [Ascaris suum]
Length = 1090
Score = 99.8 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
FISSF R+NLKY+++ K+ L V+ +KA Y G+SGIVYCL+RKEC++V+ +L + I
Sbjct: 505 FISSFVRSNLKYDVIAKRPKSLSAVMERMKALYPGKSGIVYCLSRKECETVSKSLQNQGI 564
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A YHAGL DK R VQ KWI+N ++V
Sbjct: 565 SADVYHAGLPDKQRQNVQAKWINNHINV 592
>gi|312373074|gb|EFR20899.1| hypothetical protein AND_18334 [Anopheles darlingi]
Length = 1384
Score = 99.4 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NLKY +LPKK + E+I+LIKAK++ +GIVYCL++KECD +A +
Sbjct: 790 FLSSFNRPNLKYLVLPKKGASTKGEMINLIKAKFARDTGIVYCLSKKECDQLATDFRKAG 849
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A SYHAGL D +R Q +WI +++ V
Sbjct: 850 IKAKSYHAGLTDTIREATQKEWIGDRIKV 878
>gi|307195272|gb|EFN77228.1| Bloom syndrome protein-like protein [Harpegnathos saltator]
Length = 1091
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y I+ KK N EV+++IK K+ GIVYCL+RK+C+ AA L +
Sbjct: 595 FMSSFNRPNLRYSIISKKGKNCSDEVVAMIKTKFKNVCGIVYCLSRKDCEDYAAHLKKNC 654
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+SYHAGL D RN Q KWI +++HV
Sbjct: 655 IKALSYHAGLTDNQRNNCQGKWILDEIHV 683
>gi|195112008|ref|XP_002000568.1| GI22449 [Drosophila mojavensis]
gi|193917162|gb|EDW16029.1| GI22449 [Drosophila mojavensis]
Length = 1409
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNV--LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y++LPKK V L ++ + I+++ + SGI+YCL+RKECD VA +
Sbjct: 836 FLSSFNRRNLRYQVLPKKGVSTLDDMRNFIQSRPATASGIIYCLSRKECDEVAKKMCAVG 895
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+SYHAGL D +R Q WI+NKV V
Sbjct: 896 IRALSYHAGLTDVVRESRQKDWITNKVRV 924
>gi|195396248|ref|XP_002056744.1| GJ10048 [Drosophila virilis]
gi|194143453|gb|EDW59856.1| GJ10048 [Drosophila virilis]
Length = 1324
Score = 99.0 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y++LPKK + L ++ S I+ + SGI+YCL+RKECD VA +
Sbjct: 754 FLSSFNRSNLRYQVLPKKGASTLDDIRSFIQTRAVTASGIIYCLSRKECDEVAQKMCAVG 813
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A++YHAGL D R Q WI+NKV V
Sbjct: 814 IRAVAYHAGLTDAARESRQKDWITNKVRV 842
>gi|380011350|ref|XP_003689771.1| PREDICTED: Bloom syndrome protein homolog [Apis florea]
Length = 1167
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y I+ KK N EVI++IK KY GIVYCL+RK+CD A + +
Sbjct: 671 FMSSFNRPNLRYSIIAKKSKNCSDEVIAMIKTKYKNDCGIVYCLSRKDCDDYAMHMRKNS 730
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERINA-ISYHAG 117
I A+SYHAGL D R+++Q +WIS ++ V C ++A + ++ N HA
Sbjct: 731 IKALSYHAGLTDNNRSDIQGRWISEEIKV--------VCATIAFGMGIDKPNVRFVIHAA 782
Query: 118 LADKLRNEVQ 127
L + Q
Sbjct: 783 LPKSIEGYYQ 792
>gi|383859981|ref|XP_003705470.1| PREDICTED: Bloom syndrome protein homolog [Megachile rotundata]
Length = 1362
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y I+ KK N EVI++IK KY GIVYCL+RKECD A + +
Sbjct: 827 FMSSFNRPNLRYSIITKKGKNCSDEVIAMIKTKYKNDCGIVYCLSRKECDDYAVQMRKNG 886
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERINA-ISYHAG 117
I A+ YHAGL D R+ +Q +WIS ++ V C ++A + ++ N HA
Sbjct: 887 IKALGYHAGLTDNNRSNIQGRWISEEIKV--------VCATIAFGMGIDKPNVRFVIHAA 938
Query: 118 LADKLRNEVQ 127
L + Q
Sbjct: 939 LPKSIEGYYQ 948
>gi|195054415|ref|XP_001994120.1| GH17364 [Drosophila grimshawi]
gi|193895990|gb|EDV94856.1| GH17364 [Drosophila grimshawi]
Length = 1404
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL++++LPKK + L E+ S I+ + SGI+YCL+RKECD VA ++
Sbjct: 829 FLSSFNRSNLRFQVLPKKGASTLDEMRSFIQTRPITASGIIYCLSRKECDEVAHKMSAAG 888
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A++YHAGL D R Q WI+NKV V
Sbjct: 889 IRAVAYHAGLTDTARESRQKDWITNKVRV 917
>gi|452005005|gb|EMD97461.1| hypothetical protein COCHEDRAFT_1220872 [Cochliobolus heterostrophus
C5]
Length = 1794
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL YE+LPK K ++ + LIK +Y G+SGI+YCL+RK C+ VA L+ I
Sbjct: 1057 FSQSFNRPNLSYEVLPKGKGIINSIAELIKERYVGKSGIIYCLSRKSCEQVAQKLSDMGI 1116
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R+EVQ KW N+ HV
Sbjct: 1117 RAYHYHAGMDSADRSEVQRKWQKNEYHV 1144
>gi|189200787|ref|XP_001936730.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983829|gb|EDU49317.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1420
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
+ SFNR NL YE+LPK + V+ + LIK KY+G+SGI+YCL+RK C+ VA L++ I
Sbjct: 712 YSQSFNRPNLSYEVLPKGRGVIDSIADLIKEKYTGKSGIIYCLSRKTCEQVAQKLSETGI 771
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R++VQ KW N+ HV
Sbjct: 772 RAYHYHAGMDSADRSDVQRKWQKNEYHV 799
>gi|241999220|ref|XP_002434253.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496012|gb|EEC05653.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 556
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKKNVL---KEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+ SFNR NL+YEI K + +EV+ +++ K++ QSGI+YC +RKECD +A L++
Sbjct: 213 FLQSFNRPNLRYEIRLKSGKVGTAREVLEVVEGKFARQSGIIYCFSRKECDDLAEELSKN 272
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A++YHAGL D RN VQ +WI +KV V
Sbjct: 273 GVPAVAYHAGLDDPKRNAVQQRWIDDKVRV 302
>gi|345494123|ref|XP_001606008.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1223
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y ++ KK N EVI LIKAK+ GIVYCL+R +CD+ A +
Sbjct: 670 FMSSFNRPNLRYSVISKKGKNASDEVIGLIKAKFKDDCGIVYCLSRNDCDTYAEQMKING 729
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERINA-ISYHAG 117
I A+ YHAGL+DK R+++Q +WIS ++ V C ++A + ++ N HA
Sbjct: 730 IKAMGYHAGLSDKQRSDIQGRWISEQIKV--------VCATIAFGMGIDKPNVRFVIHAS 781
Query: 118 LADKLRNEVQ 127
L + Q
Sbjct: 782 LPKSIEGYYQ 791
>gi|328778036|ref|XP_396209.4| PREDICTED: Bloom syndrome protein homolog, partial [Apis mellifera]
Length = 1179
Score = 97.1 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y I+ KK N EVI +IK KY GIVYCL+RK+CD A + +
Sbjct: 800 FMSSFNRPNLRYSIIAKKGKNCSDEVIGMIKTKYKNDCGIVYCLSRKDCDDYAMHMRKNS 859
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERINA-ISYHAG 117
I A+SYHAGL D R+++Q +WIS ++ V C ++A + ++ N HA
Sbjct: 860 IKALSYHAGLTDNNRSDIQGRWISEEIKV--------VCATIAFGMGIDKPNVRFVIHAA 911
Query: 118 LADKLRNEVQ 127
L + Q
Sbjct: 912 LPKSIEGYYQ 921
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL YE+LPK K ++ + LIK +Y G+SGI+YCL+RK C+ VA L++ I
Sbjct: 1057 FSQSFNRPNLSYEVLPKAKGIINNIADLIKERYVGKSGIIYCLSRKSCEQVAQKLSEMGI 1116
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R++VQ KW N+ HV
Sbjct: 1117 RAYHYHAGMDSADRSDVQRKWQKNEYHV 1144
>gi|195451292|ref|XP_002072850.1| GK13825 [Drosophila willistoni]
gi|194168935|gb|EDW83836.1| GK13825 [Drosophila willistoni]
Length = 1457
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y++LPKK + L+++ + IK++ + SGI+YCL+RKECD V+ + +
Sbjct: 883 FLSSFNRSNLRYKVLPKKGASTLEDISAFIKSRPANSSGIIYCLSRKECDDVSQKMCKAG 942
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I +++YHAGL+D R Q WI +KV V
Sbjct: 943 IRSVAYHAGLSDTERESRQKDWILSKVRV 971
>gi|307183296|gb|EFN70165.1| Bloom syndrome protein-like protein [Camponotus floridanus]
Length = 1313
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+S FNR NL+Y I+ KK N EVI++I KY GIVYCL+RK+CD AA + +
Sbjct: 820 FMSGFNRPNLRYSIITKKGKNCSDEVIAMIMTKYRNTCGIVYCLSRKDCDDYAAQMKKNG 879
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+SYHAGL D R+ Q +WI++++HV
Sbjct: 880 IKALSYHAGLTDNQRSNCQGRWIADEIHV 908
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FI SFNR+NLKY I PKK V ++ I+LI+A+++G+SGI+YCL+R EC+ VAA L+
Sbjct: 652 FIQSFNRSNLKYSIYPKKPSKVTQDCINLIQARFAGESGIIYCLSRNECEKVAAELSSAG 711
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A +YHAGL R Q W+ ++ V
Sbjct: 712 ISAKAYHAGLESNSRTYTQQAWVRDEYKV 740
>gi|322801995|gb|EFZ22532.1| hypothetical protein SINV_04660 [Solenopsis invicta]
Length = 1148
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y I+ KK N E++++I K+ GIVYCL+RK+CD AA + +
Sbjct: 706 FMSSFNRPNLRYSIIAKKGKNCSDEIVAMIMTKFKNACGIVYCLSRKDCDDYAAQMKKNG 765
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A+SYHAGL+D R+ Q KWIS+++ V T+
Sbjct: 766 IKALSYHAGLSDVQRSNCQGKWISDEIRVICATI 799
>gi|198454689|ref|XP_001359676.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
gi|198132910|gb|EAL28826.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y++LPKK + + ++ + I+ K SGI+YCL+RKECD VA + ++
Sbjct: 775 FLSSFNRSNLRYKVLPKKGASTIDDMSAYIRTKPPNSSGIIYCLSRKECDEVAKKMCKDG 834
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A++YHAGL D R Q W++NK+ V
Sbjct: 835 VRAVAYHAGLTDSEREGRQKDWLTNKIRV 863
>gi|195157038|ref|XP_002019403.1| GL12253 [Drosophila persimilis]
gi|194115994|gb|EDW38037.1| GL12253 [Drosophila persimilis]
Length = 1349
Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y++LPKK + + ++ + I+ K SGI+YCL+RKECD VA + ++
Sbjct: 775 FLSSFNRSNLRYKVLPKKGASTIDDMSAYIRTKPPNSSGIIYCLSRKECDEVAKKMCKDG 834
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A++YHAGL D R Q W++NK+ V
Sbjct: 835 VRAVAYHAGLTDSEREGRQKDWLTNKIRV 863
>gi|332023927|gb|EGI64145.1| Bloom syndrome protein-like protein [Acromyrmex echinatior]
Length = 1254
Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 11/130 (8%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y I+ KK N E++++I K+ GIVYCL+RK+C+ AA + +
Sbjct: 715 FMSSFNRPNLRYSIISKKGKNCSDEIVAMIMTKFKNTCGIVYCLSRKDCEDYAAHMKKNG 774
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERINA-ISYHAG 117
I +SYHAGL+D R+ Q KWIS++VHV C ++A + ++ N HA
Sbjct: 775 IKVLSYHAGLSDTQRSNCQGKWISDEVHV--------ICATIAFGMGIDKPNVRFVIHAA 826
Query: 118 LADKLRNEVQ 127
L + + Q
Sbjct: 827 LPKSIESYYQ 836
>gi|396484512|ref|XP_003841962.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
gi|312218537|emb|CBX98483.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
Length = 1753
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL YE+LPK K V+ + LIK +YS +SGI+YCL+RK C+ VA L+ +
Sbjct: 1032 FSQSFNRPNLSYEVLPKSKGVVNSIAELIKDRYSKKSGIIYCLSRKSCEDVAKKLSDLGL 1091
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R+ VQ KW SN+ HV
Sbjct: 1092 KAFHYHAGMESAERSAVQRKWQSNEYHV 1119
>gi|350417151|ref|XP_003491281.1| PREDICTED: Bloom syndrome protein homolog [Bombus impatiens]
Length = 1344
Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL+Y I+ KK N EVI+++K KY + GIVYCL+RK+CD A + +
Sbjct: 826 FMSSFNRPNLRYSIIAKKGKNCSDEVIAMLKMKYKNECGIVYCLSRKDCDDYAMQMRKNG 885
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERINA-ISYHAG 117
I A+SYHAG D R ++Q +WIS ++ V C ++A + ++ N HA
Sbjct: 886 IKALSYHAGHTDSSRTDIQGRWISEEIKV--------VCATIAFGMGIDKPNVRFVIHAA 937
Query: 118 LADKLRNEVQ 127
L + Q
Sbjct: 938 LPKSIEGYYQ 947
>gi|157104176|ref|XP_001648286.1| blooms syndrome DNA helicase [Aedes aegypti]
gi|108880401|gb|EAT44626.1| AAEL004039-PA [Aedes aegypti]
Length = 1406
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNVL--KEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+ SFNR NLKY + PK+ V +E+I LIK KY SGIVYCL +K+CD +AA +
Sbjct: 860 FLCSFNRPNLKYIVRPKQGVATKQEIIDLIKKKYPRASGIVYCLAKKDCDQLAAEMKSAG 919
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A SYHAGL+D R Q WI++K V
Sbjct: 920 ISAKSYHAGLSDSQRESTQKDWIADKTKV 948
>gi|169618104|ref|XP_001802466.1| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
gi|160703551|gb|EAT80652.2| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
Length = 1681
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL YE+LPK KN++ ++ LIK K+ +SGI+YCL+RK C+ VA L+ I
Sbjct: 966 FSQSFNRPNLSYEVLPKSKNIINDIAKLIKEKHDKKSGIIYCLSRKSCEQVAEKLSNLGI 1025
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A YHAG+ R+ VQ KW N+ HV
Sbjct: 1026 SAFHYHAGMEPAERSAVQRKWQHNEYHV 1053
>gi|345486372|ref|XP_001605988.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1211
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNVL--KEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FISSFNR NL+Y + +K+ + V+ LIK K+ GI+YC +R +CD++A AL +E
Sbjct: 713 FISSFNRPNLRYTVTLRKSKYPYQLVLDLIKTKFPNDCGIIYCFSRNDCDNLAEALKKEG 772
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+SYHAGL DK+R + Q++W+S KV V
Sbjct: 773 IQALSYHAGLDDKVRTDRQIQWVSEKVKV 801
>gi|360043045|emb|CCD78457.1| putative blooms syndrome DNA helicase [Schistosoma mansoni]
Length = 881
Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FI SFNRANL++E+ PKK N KE+I +I+ ++ +SGIVYCL+R+ECD VA L
Sbjct: 596 FIQSFNRANLRFEVRPKKLKNCTKEIIDVIRNEFPKRSGIVYCLSRRECDVVAEELKAAG 655
Query: 59 INAISYHAGLADKLRNEVQMKWI 81
+ A +YHAG+ D R VQ WI
Sbjct: 656 LQASAYHAGMTDAQRRNVQQAWI 678
>gi|194744401|ref|XP_001954683.1| GF16620 [Drosophila ananassae]
gi|190627720|gb|EDV43244.1| GF16620 [Drosophila ananassae]
Length = 1512
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y+++PKK + L ++ I++K + SGI+YCL+RKECD VA + ++
Sbjct: 875 FLSSFNRSNLRYKVMPKKGASTLDDISGYIRSKPAHSSGIIYCLSRKECDDVAKKMCKDG 934
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A++YHAGL D R Q W++ K+ V
Sbjct: 935 VRAVAYHAGLTDNERETRQKDWLTGKLRV 963
>gi|195329754|ref|XP_002031575.1| GM26077 [Drosophila sechellia]
gi|194120518|gb|EDW42561.1| GM26077 [Drosophila sechellia]
Length = 1268
Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNV--LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y +LPKK V L ++ I++K + SGI+YCL+RKECD + + ++
Sbjct: 704 FLSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKKMCKDG 763
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+SYHAGL D R Q W++ K+ V
Sbjct: 764 IRAVSYHAGLTDTERESRQKDWLTGKIRV 792
>gi|196013025|ref|XP_002116374.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
gi|190580965|gb|EDV21044.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
Length = 752
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F+ SFNR NL+Y +LPK K +E+I ++ +++ +SGIVYCL+R ECD V++ L + I
Sbjct: 288 FVQSFNRPNLQYSVLPKNKCTAQEIIKIVNSQFRNESGIVYCLSRNECDRVSSTLREAGI 347
Query: 60 NAISYHAGLADKLRNEVQMKWIS 82
A+SYHAGL K R VQ +WI+
Sbjct: 348 AALSYHAGLDAKERTNVQKRWIT 370
>gi|148236484|ref|NP_001079095.1| Bloom syndrome protein homolog [Xenopus laevis]
gi|17366056|sp|Q9DEY9.1|BLM_XENLA RecName: Full=Bloom syndrome protein homolog; Short=xBLM; AltName:
Full=RecQ helicase homolog
gi|11120568|gb|AAG30928.1|AF307841_1 Bloom's syndrome-like protein [Xenopus laevis]
Length = 1364
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKYE+LPKK V + + IK + SGI+YCL+R ECD++A L +E
Sbjct: 805 FTMSFNRDNLKYEVLPKKPKRVALDCVEWIKKHHPNDSGIIYCLSRHECDTMADTLQKEG 864
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGLAD R+ VQ KWI+
Sbjct: 865 LAALAYHAGLADSNRDYVQHKWIN 888
>gi|158290315|ref|XP_311930.4| AGAP002967-PA [Anopheles gambiae str. PEST]
gi|157017834|gb|EAA07614.4| AGAP002967-PA [Anopheles gambiae str. PEST]
Length = 1425
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNVLK--EVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+ SFNR NLKY +LPKK V E+I LI+ ++ +GIVYCL++KECD +A +
Sbjct: 840 FLCSFNRPNLKYLVLPKKGVSTKAEMIELIRKRFPRDTGIVYCLSKKECDQLADEFRRAG 899
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A SYHAGL+D +R Q +WI +++ V
Sbjct: 900 IKAKSYHAGLSDGVREATQKEWIGDRIKV 928
>gi|391333104|ref|XP_003740962.1| PREDICTED: Bloom syndrome protein-like [Metaseiulus occidentalis]
Length = 1216
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Query: 1 FISSFNRANLKYEILP--KKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+ SFNR NL+Y+I+ + + +I LI KY +SGIVYCL+RK+CD AA L
Sbjct: 753 FLQSFNRPNLRYQIVKYFSGSPVTHIIKLISNKYFEKSGIVYCLSRKDCDQTAAKLESAG 812
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERINA-ISYHAG 117
I+A+SYHAG+ D R+ +Q WI+ + HV C ++A + ++ N +H G
Sbjct: 813 ISAVSYHAGMNDAERSSIQDMWINGRKHV--------VCATIAFGMGIDKANVRFVFHTG 864
Query: 118 LADKLRNEVQ 127
L + Q
Sbjct: 865 LPKSVEGYYQ 874
>gi|312091032|ref|XP_003146836.1| RecQ helicase [Loa loa]
Length = 970
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FISSF R NLKY+++ K +++LK V+ +K Y G+SGIVYCL+RK+C+SVA L
Sbjct: 479 FISSFVRTNLKYDVIAKGPRSLLK-VMDRMKILYPGKSGIVYCLSRKDCESVAKMLESHS 537
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+++ YHAGL+DK R EVQ +WI+N+V+V
Sbjct: 538 MSSEVYHAGLSDKKRLEVQTRWINNRVNV 566
>gi|393911582|gb|EJD76373.1| CBR-HIM-6 protein [Loa loa]
Length = 1044
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FISSF R NLKY+++ K +++LK V+ +K Y G+SGIVYCL+RK+C+SVA L
Sbjct: 479 FISSFVRTNLKYDVIAKGPRSLLK-VMDRMKILYPGKSGIVYCLSRKDCESVAKMLESHS 537
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+++ YHAGL+DK R EVQ +WI+N+V+V
Sbjct: 538 MSSEVYHAGLSDKKRLEVQTRWINNRVNV 566
>gi|256090022|ref|XP_002581026.1| blooms syndrome DNA helicase [Schistosoma mansoni]
Length = 258
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FI SFNRANL++E+ PKK N KE+I +I+ ++ +SGIVYCL+R+ECD VA L
Sbjct: 161 FIQSFNRANLRFEVRPKKLKNCTKEIIDVIRNEFPKRSGIVYCLSRRECDVVAEELKAAG 220
Query: 59 INAISYHAGLADKLRNEVQMKWI 81
+ A +YHAG+ D R VQ WI
Sbjct: 221 LQASAYHAGMTDAQRRNVQQAWI 243
>gi|157278040|ref|NP_001098120.1| Bloom syndrome helicase [Oryzias latipes]
gi|140083401|gb|ABO84823.1| Bloom syndrome helicase [Oryzias latipes]
Length = 1393
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR+NLKY +LPKK V ++ I IK Y SGIVYCL+R +CD++A +L +
Sbjct: 832 FTMSFNRSNLKYSVLPKKPKKVDEDCIGWIKKHYPRDSGIVYCLSRNDCDAMAESLKRAG 891
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
I A+SYHAGL+D R VQ KWI+
Sbjct: 892 IQALSYHAGLSDGDREYVQSKWIN 915
>gi|25145561|ref|NP_502390.2| Protein HIM-6 [Caenorhabditis elegans]
gi|28201770|sp|O18017.2|BLM_CAEEL RecName: Full=Bloom syndrome protein homolog; AltName: Full=High
incidence of males protein 6; AltName: Full=RecQ
helicase homolog
gi|20853750|gb|AAM26298.1| RecQ helicase [Caenorhabditis elegans]
gi|22859109|emb|CAB05609.2| Protein HIM-6 [Caenorhabditis elegans]
Length = 988
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
FISSF R NLKY+++PK L V+ +K Y G+SGIVYCL+RKEC++V L + +
Sbjct: 435 FISSFVRDNLKYDLIPKAARSLINVVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGL 494
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A YHAGL D LR VQ WI+NK V
Sbjct: 495 SAEVYHAGLNDNLRVSVQRSWIANKFDV 522
>gi|345495259|ref|XP_001605753.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1426
Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR NL Y + KK N +E+I +IK + GIVYCL+RK+CDS A +
Sbjct: 864 FMSSFNRPNLHYVVTSKKGKNSTEEIIEMIKRDFRNDCGIVYCLSRKDCDSFADTMKSNG 923
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+SYHAGL+D R E+Q +WIS ++ V
Sbjct: 924 IKALSYHAGLSDHQRLEIQGRWISEQIKV 952
>gi|392337763|ref|XP_003753349.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+RKECD++A L +E
Sbjct: 844 FSMSFNRHNLKYYVLPKKPKKVALDCLEWIRKHHPYDSGIIYCLSRKECDTMADTLQREG 903
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 904 LAALAYHAGLSDSARDEVQHKWIN 927
>gi|392344358|ref|XP_003748936.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+RKECD++A L +E
Sbjct: 844 FSMSFNRHNLKYYVLPKKPKKVALDCLEWIRKHHPYDSGIIYCLSRKECDTMADTLQREG 903
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 904 LAALAYHAGLSDSARDEVQHKWIN 927
>gi|5281068|gb|AAD41441.1|U92536_1 RECQ helicase homolog [Drosophila melanogaster]
Length = 1487
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNV--LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y +LPKK V L ++ I++K SGI+YCL+RKECD + + ++
Sbjct: 923 FLSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDG 982
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A+SYHAGL D R Q W++ K+ V
Sbjct: 983 VRAVSYHAGLTDTDRESRQKDWLTGKMRV 1011
>gi|296204062|ref|XP_002749167.1| PREDICTED: Bloom syndrome protein isoform 2 [Callithrix jacchus]
Length = 1415
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 852 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 911
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
++A++YHAGL+D R+E+Q KWI+
Sbjct: 912 LSALAYHAGLSDSARDEIQQKWIN 935
>gi|149057328|gb|EDM08651.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149057329|gb|EDM08652.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 999
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+RKECD++A L +E
Sbjct: 844 FSMSFNRHNLKYYVLPKKPKKVALDCLEWIRKHHPYDSGIIYCLSRKECDTMADTLQREG 903
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 904 LAALAYHAGLSDSARDEVQHKWIN 927
>gi|341891934|gb|EGT47869.1| hypothetical protein CAEBREN_30811 [Caenorhabditis brenneri]
Length = 978
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
FISSF R NLKY+++PK L V+ +K Y G+SGIVYCL+RKEC++V L + +
Sbjct: 426 FISSFVRDNLKYDLIPKAAKSLVNVVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGL 485
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A YHAGL D LR VQ W++NK V
Sbjct: 486 SAEVYHAGLNDNLRVSVQKSWLANKFDV 513
>gi|24646066|ref|NP_524319.2| bloom syndrome helicase ortholog [Drosophila melanogaster]
gi|17366114|sp|Q9VGI8.1|BLM_DROME RecName: Full=Bloom syndrome protein homolog; Short=Dmblm; AltName:
Full=Mutagen-sensitive protein 309; AltName: Full=RecQ
helicase homolog
gi|7299503|gb|AAF54691.1| bloom syndrome helicase ortholog [Drosophila melanogaster]
Length = 1487
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNV--LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y +LPKK V L ++ I++K SGI+YCL+RKECD + + ++
Sbjct: 923 FLSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDG 982
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A+SYHAGL D R Q W++ K+ V
Sbjct: 983 VRAVSYHAGLTDTDRESRQKDWLTGKMRV 1011
>gi|348506232|ref|XP_003440664.1| PREDICTED: Bloom syndrome protein homolog [Oreochromis niloticus]
Length = 1403
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V ++ S IK Y SGIVYCL+R +CD++A +L +
Sbjct: 844 FTMSFNRTNLKYAVLPKKPKKVDEDCTSWIKKHYPRDSGIVYCLSRNDCDAMAESLQRAG 903
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
++A+SYHAGL+D R VQ KWI+
Sbjct: 904 LSALSYHAGLSDSDREYVQSKWIN 927
>gi|109082375|ref|XP_001097543.1| PREDICTED: Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 852 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 911
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 912 LAALAYHAGLSDSARDEVQQKWIN 935
>gi|383420697|gb|AFH33562.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 852 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 911
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 912 LAALAYHAGLSDSARDEVQQKWIN 935
>gi|355692996|gb|EHH27599.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 852 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 911
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 912 LAALAYHAGLSDSARDEVQQKWIN 935
>gi|403258502|ref|XP_003921799.1| PREDICTED: Bloom syndrome protein [Saimiri boliviensis boliviensis]
Length = 1499
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 852 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 911
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 912 LAALAYHAGLSDSARDEVQQKWIN 935
>gi|402875293|ref|XP_003901445.1| PREDICTED: Bloom syndrome protein-like [Papio anubis]
Length = 1042
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 478 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 537
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 538 LAALAYHAGLSDSARDEVQQKWIN 561
>gi|410907219|ref|XP_003967089.1| PREDICTED: Bloom syndrome protein homolog [Takifugu rubripes]
Length = 1392
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V ++ IS IK Y SGI+YCL+R +CD++A +L +
Sbjct: 829 FTMSFNRTNLKYAVLPKKPKKVDEDCISWIKKHYPRDSGIIYCLSRNDCDAMAESLQRAG 888
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A+SYHAGL+D R VQ KWI+
Sbjct: 889 LLALSYHAGLSDGNREYVQTKWIN 912
>gi|355778305|gb|EHH63341.1| Bloom syndrome protein [Macaca fascicularis]
Length = 1338
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 832 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 891
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 892 LAALAYHAGLSDSARDEVQQKWIN 915
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FI SFNR NLK+E+ PKK + KE+I +I +++ +SGIVYCL+R+ECD VA L++
Sbjct: 403 FIQSFNRTNLKFEVRPKKLKSCTKEIIEVIHSEFPRRSGIVYCLSRRECDLVAEELSRAG 462
Query: 59 INAISYHAGLADKLRNEVQMKWI 81
+ A +YHAG+ D R +Q WI
Sbjct: 463 LAASAYHAGMTDAQRRRIQEAWI 485
>gi|189527306|ref|XP_701357.3| PREDICTED: Bloom syndrome protein homolog, partial [Danio rerio]
Length = 1261
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V +E I IK Y SGIVYCL+R +CD++A +L +
Sbjct: 864 FTMSFNRNNLKYSVLPKKPKKVDEECIQWIKKYYPRDSGIVYCLSRNDCDTLADSLQRAG 923
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
I A++YHAGL+D R VQ KWI+
Sbjct: 924 IAALAYHAGLSDSDREYVQNKWIN 947
>gi|3370996|dbj|BAA32001.1| mBlm [Mus musculus]
Length = 1416
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +E
Sbjct: 861 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREG 920
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 921 LAALAYHAGLSDSARDEVQHKWIN 944
>gi|226693393|ref|NP_031576.4| Bloom syndrome protein homolog isoform 1 [Mus musculus]
Length = 1419
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +E
Sbjct: 864 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREG 923
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 924 LAALAYHAGLSDSARDEVQHKWIN 947
>gi|148675036|gb|EDL06983.1| Bloom syndrome homolog (human), isoform CRA_b [Mus musculus]
Length = 1417
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +E
Sbjct: 862 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREG 921
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 922 LAALAYHAGLSDSARDEVQHKWIN 945
>gi|148675035|gb|EDL06982.1| Bloom syndrome homolog (human), isoform CRA_a [Mus musculus]
Length = 1420
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +E
Sbjct: 865 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREG 924
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 925 LAALAYHAGLSDSARDEVQHKWIN 948
>gi|110225360|ref|NP_001035992.1| Bloom syndrome protein homolog isoform 2 [Mus musculus]
gi|5921178|sp|O88700.1|BLM_MOUSE RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName:
Full=RecQ helicase homolog
gi|3452495|emb|CAB10933.1| BLM protein [Mus musculus]
gi|162318414|gb|AAI57096.1| Bloom syndrome homolog (human) [synthetic construct]
Length = 1416
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +E
Sbjct: 861 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREG 920
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 921 LAALAYHAGLSDSARDEVQHKWIN 944
>gi|126273765|ref|XP_001368666.1| PREDICTED: Bloom syndrome protein [Monodelphis domestica]
Length = 1401
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 837 FSMSFNRHNLKYSVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDG 896
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A+SYHAGL+D R+EVQ KWI+
Sbjct: 897 LAALSYHAGLSDSARDEVQHKWIN 920
>gi|47224193|emb|CAG13113.1| unnamed protein product [Tetraodon nigroviridis]
Length = 827
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V ++ IS IK Y SGI+YCL+R +CD++A +L +
Sbjct: 243 FTMSFNRTNLKYAVLPKKPKKVDEDCISWIKKHYPRDSGIIYCLSRNDCDTMAESLQRAG 302
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A+SYHAGL D R VQ KWI+
Sbjct: 303 LLALSYHAGLRDGEREYVQTKWIN 326
>gi|347800747|ref|NP_001007088.2| Bloom syndrome protein homolog [Gallus gallus]
Length = 1380
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + + IK + SGI+YCL+R ECD+ AA L +E
Sbjct: 821 FTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEG 880
Query: 59 INAISYHAGLADKLRNEVQMKWISNK 84
+ A++YHAGL D R+ VQ KW++ +
Sbjct: 881 LAALAYHAGLTDSNRDLVQKKWVNQE 906
>gi|308452165|ref|XP_003088938.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
gi|308244257|gb|EFO88209.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
Length = 1020
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
FISSF R NLKY+++PK L V+ +K Y G+SGIVYCL+RKEC++V L + +
Sbjct: 469 FISSFVRDNLKYDLIPKAAKSLINVVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGL 528
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A YHAGL D LR VQ W++NK V
Sbjct: 529 SAEVYHAGLNDGLRVSVQKGWLANKFDV 556
>gi|290490724|dbj|BAI79322.1| BLM helicase [Gallus gallus]
Length = 1380
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + + IK + SGI+YCL+R ECD+ AA L +E
Sbjct: 821 FTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEG 880
Query: 59 INAISYHAGLADKLRNEVQMKWISNK 84
+ A++YHAGL D R+ VQ KW++ +
Sbjct: 881 LAALAYHAGLTDSNRDLVQKKWVNQE 906
>gi|194901954|ref|XP_001980516.1| GG17198 [Drosophila erecta]
gi|190652219|gb|EDV49474.1| GG17198 [Drosophila erecta]
Length = 1457
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y +LPKK + L ++ I++K + SGI+YCL+RKECD + + ++
Sbjct: 893 FLSSFNRSNLRYRVLPKKGASTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKRMCKDG 952
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A++YHAGL D R Q W++ K+ V
Sbjct: 953 VRAVAYHAGLTDTEREGRQKDWLTGKIRV 981
>gi|449471881|ref|XP_004175079.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein homolog
[Taeniopygia guttata]
Length = 1069
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + + IK + SGI+YCL+R ECD+ AA L +E
Sbjct: 581 FTMSFNRHNLKYDVLPKKPKKVALDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEG 640
Query: 59 INAISYHAGLADKLRNEVQMKWISNK 84
+ A++YHAGL D R+ VQ KW++ +
Sbjct: 641 LAALAYHAGLTDSNRDLVQQKWVNQE 666
>gi|53133486|emb|CAG32072.1| hypothetical protein RCJMB04_17c23 [Gallus gallus]
Length = 1183
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + + IK + SGI+YCL+R ECD+ AA L +E
Sbjct: 624 FTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEG 683
Query: 59 INAISYHAGLADKLRNEVQMKWISNK 84
+ A++YHAGL D R+ VQ KW++ +
Sbjct: 684 LAALAYHAGLTDSNRDLVQKKWVNQE 709
>gi|17366086|sp|Q9I920.1|BLM_CHICK RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ
helicase homolog
gi|8567899|dbj|BAA96742.1| Gd BLM [Gallus gallus]
Length = 1142
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + + IK + SGI+YCL+R ECD+ AA L +E
Sbjct: 583 FTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEG 642
Query: 59 INAISYHAGLADKLRNEVQMKWISNK 84
+ A++YHAGL D R+ VQ KW++ +
Sbjct: 643 LAALAYHAGLTDSNRDLVQKKWVNQE 668
>gi|326936299|ref|XP_003214193.1| PREDICTED: Bloom syndrome protein homolog [Meleagris gallopavo]
Length = 587
Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + + IK + SGI+YCL+R ECD+ AA L +E
Sbjct: 27 FTMSFNRHNLKYDVLPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAMLQKEG 86
Query: 59 INAISYHAGLADKLRNEVQMKWISNK 84
+ A++YHAGL D R+ VQ KW++ +
Sbjct: 87 LAALAYHAGLTDSNRDLVQKKWVNQE 112
>gi|345315332|ref|XP_001515695.2| PREDICTED: Bloom syndrome protein [Ornithorhynchus anatinus]
Length = 865
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + +S I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 273 FSMSFNRHNLKYDVLPKKPKKVAFDCLSWIRKHHPYDSGIIYCLSRRECDTMALTLRKDG 332
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 333 LAALAYHAGLSDSARDEVQHKWIN 356
>gi|301768849|ref|XP_002919837.1| PREDICTED: Bloom syndrome protein-like [Ailuropoda melanoleuca]
gi|281350343|gb|EFB25927.1| hypothetical protein PANDA_008500 [Ailuropoda melanoleuca]
Length = 1423
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 860 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDG 919
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 920 LAALAYHAGLSDSARDEVQHKWIN 943
>gi|178056740|ref|NP_001116556.1| Bloom syndrome protein [Sus scrofa]
gi|168084100|dbj|BAG09489.1| Bloom syndrome protein [Sus scrofa]
Length = 1426
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 865 FTMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDG 924
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 925 LAALAYHAGLSDSARDEVQHKWIN 948
>gi|410960520|ref|XP_003986837.1| PREDICTED: Bloom syndrome protein [Felis catus]
Length = 1428
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 864 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDG 923
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 924 LAALAYHAGLSDSARDEVQHKWIN 947
>gi|380797039|gb|AFE70395.1| Bloom syndrome protein, partial [Macaca mulatta]
Length = 786
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 222 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 281
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 282 LAALAYHAGLSDSARDEVQQKWIN 305
>gi|67971772|dbj|BAE02228.1| unnamed protein product [Macaca fascicularis]
Length = 408
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ Y SGI+YCL+R+ECD++A L ++
Sbjct: 283 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDG 342
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 343 LAALAYHAGLSDSARDEVQQKWIN 366
>gi|170042287|ref|XP_001848863.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
gi|167865792|gb|EDS29175.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
Length = 1437
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKNVLK--EVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+ SFNR NLKY I PK+ V E++ LIK K+ +GIVYCL++K+CD ++A +
Sbjct: 883 FLCSFNRPNLKYIIRPKQGVATKAEIMELIKKKFPRATGIVYCLSKKDCDQLSAEMRCAG 942
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A SYHAGL D R Q WI++K+ V
Sbjct: 943 IKAKSYHAGLGDAEREATQKDWITDKIKV 971
>gi|395502424|ref|XP_003755581.1| PREDICTED: Bloom syndrome protein [Sarcophilus harrisii]
Length = 1445
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 887 FSMSFNRHNLKYSVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDG 946
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 947 LAALAYHAGLSDSARDEVQHKWIN 970
>gi|255531959|ref|YP_003092331.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
gi|255344943|gb|ACU04269.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
Length = 729
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/87 (52%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK++VLKE+I IK +G+SGI+YCL+RK+ + VA +L I
Sbjct: 202 FKSSFNRPNLFYEIRPKRDVLKEIIRYIKYN-TGKSGIIYCLSRKKVEEVAESLNLNGIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K+R E Q K++ V V
Sbjct: 261 ALPYHAGLEPKVRAETQDKFLMEDVEV 287
>gi|432093931|gb|ELK25783.1| Bloom syndrome protein [Myotis davidii]
Length = 1296
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +
Sbjct: 734 FTMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKNG 793
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 794 LPALAYHAGLSDSARDEVQHKWIN 817
>gi|291410501|ref|XP_002721547.1| PREDICTED: Bloom syndrome protein [Oryctolagus cuniculus]
Length = 1414
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 855 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQKDG 914
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 915 LAALAYHAGLSDSARDEVQHKWIN 938
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+ SFNR NL Y ++PKK + KEV+ LI +++ ++GIVYCL+RKEC++V+ L +
Sbjct: 210 FVQSFNRTNLHYSVMPKKVKSATKEVLELINSRFRSKTGIVYCLSRKECETVSDELCRNG 269
Query: 59 INAISYHAGLADKLRNEVQMKW 80
+A +YHAG++DK R +Q W
Sbjct: 270 TSACAYHAGMSDKERARIQDLW 291
>gi|345798304|ref|XP_003434427.1| PREDICTED: Bloom syndrome protein [Canis lupus familiaris]
Length = 1420
Score = 89.4 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 855 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKYHPHDSGIIYCLSRRECDTMADTLQKDG 914
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 915 LAALAYHAGLSDSARDEVQHKWIN 938
>gi|410346341|gb|JAA40688.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 853 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 912
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 913 LAALAYHAGLSDSARDEVQQKWIN 936
>gi|332238724|ref|XP_003268551.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Nomascus
leucogenys]
Length = 1417
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 853 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 912
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 913 LAALAYHAGLSDSARDEVQQKWIN 936
>gi|189054874|dbj|BAG36927.1| unnamed protein product [Homo sapiens]
Length = 1417
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 853 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 912
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 913 LAALAYHAGLSDSARDEVQQKWIN 936
>gi|4557365|ref|NP_000048.1| Bloom syndrome protein [Homo sapiens]
gi|1705486|sp|P54132.1|BLM_HUMAN RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase,
RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ
protein-like 3
gi|1072122|gb|AAA87850.1| Bloom's syndrome protein [Homo sapiens]
gi|58003498|gb|AAW62255.1| Bloom syndrome [Homo sapiens]
gi|62739395|gb|AAH93622.1| Bloom syndrome [Homo sapiens]
gi|75517719|gb|AAI01568.1| Bloom syndrome [Homo sapiens]
gi|92096020|gb|AAI15033.1| Bloom syndrome [Homo sapiens]
gi|92097932|gb|AAI15031.1| Bloom syndrome [Homo sapiens]
gi|119622513|gb|EAX02108.1| Bloom syndrome, isoform CRA_b [Homo sapiens]
Length = 1417
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 853 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 912
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 913 LAALAYHAGLSDSARDEVQQKWIN 936
>gi|119622512|gb|EAX02107.1| Bloom syndrome, isoform CRA_a [Homo sapiens]
Length = 1392
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 828 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 887
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 888 LAALAYHAGLSDSARDEVQQKWIN 911
>gi|114658901|ref|XP_510594.2| PREDICTED: Bloom syndrome protein isoform 2 [Pan troglodytes]
gi|332844655|ref|XP_003314898.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan troglodytes]
Length = 1417
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 853 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 912
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 913 LAALAYHAGLSDSARDEVQQKWIN 936
>gi|355672742|gb|AER95092.1| Bloom syndrome, RecQ helicase-like protein [Mustela putorius furo]
Length = 843
Score = 89.4 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 275 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDG 334
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KW++
Sbjct: 335 LAALAYHAGLSDSARDEVQHKWVN 358
>gi|297487976|ref|XP_002696629.1| PREDICTED: Bloom syndrome protein [Bos taurus]
gi|296475516|tpg|DAA17631.1| TPA: Bloom syndrome, RecQ helicase-like [Bos taurus]
Length = 1430
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +
Sbjct: 866 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMAETLQNDG 925
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 926 LAALAYHAGLSDSARDEVQHKWIN 949
>gi|410261436|gb|JAA18684.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 853 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 912
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 913 LAALAYHAGLSDSARDEVQQKWIN 936
>gi|440913178|gb|ELR62661.1| Bloom syndrome protein [Bos grunniens mutus]
Length = 1430
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +
Sbjct: 866 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMAETLQNDG 925
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 926 LAALAYHAGLSDSARDEVQHKWIN 949
>gi|119913638|ref|XP_613809.3| PREDICTED: Bloom syndrome protein [Bos taurus]
Length = 1430
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +
Sbjct: 866 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMAETLQNDG 925
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 926 LAALAYHAGLSDSARDEVQHKWIN 949
>gi|397472473|ref|XP_003807768.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan paniscus]
gi|397472475|ref|XP_003807769.1| PREDICTED: Bloom syndrome protein isoform 2 [Pan paniscus]
Length = 1417
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 853 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 912
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 913 LAALAYHAGLSDSARDEVQQKWIN 936
>gi|219518767|gb|AAI43281.1| BLM protein [Homo sapiens]
Length = 1042
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 478 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 537
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 538 LAALAYHAGLSDSARDEVQQKWIN 561
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 89.0 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK + VL + LIK+ Y GQ+GIVYCL+RK C+SVA L +E
Sbjct: 1022 FTQSFNRPNLTYEVRPKGKGRAVLDSIADLIKSTYDGQAGIVYCLSRKNCESVATQLRKE 1081
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ R E+Q KW + +V
Sbjct: 1082 YHIEAQHYHAGIPSGKRIEIQQKWQEGEFNV 1112
>gi|426248114|ref|XP_004017810.1| PREDICTED: Bloom syndrome protein [Ovis aries]
Length = 1429
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +
Sbjct: 865 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKYHPHDSGIIYCLSRRECDTMAETLQNDG 924
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 925 LAALAYHAGLSDSARDEVQHKWIN 948
>gi|395747150|ref|XP_002825880.2| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Pongo
abelii]
Length = 1398
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 834 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 893
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 894 LAALAYHAGLSDSARDEVQQKWIN 917
>gi|268535576|ref|XP_002632923.1| C. briggsae CBR-HIM-6 protein [Caenorhabditis briggsae]
Length = 395
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
FISSF R NLKY+++PK L V+ +K Y G+SGIVYCL+RKEC++V L + +
Sbjct: 187 FISSFVRDNLKYDLIPKAAKSLINVVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGL 246
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A YHAGL D LR VQ W++NK V
Sbjct: 247 SAEVYHAGLNDNLRVSVQKGWLANKFDV 274
>gi|426380348|ref|XP_004056835.1| PREDICTED: Bloom syndrome protein [Gorilla gorilla gorilla]
Length = 1377
Score = 89.0 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 813 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 872
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 873 LAALAYHAGLSDSARDEVQQKWIN 896
>gi|195501810|ref|XP_002097953.1| GE10090 [Drosophila yakuba]
gi|194184054|gb|EDW97665.1| GE10090 [Drosophila yakuba]
Length = 1490
Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y +LPKK + L ++ I++K + SGI+YCL+RKECD + + ++
Sbjct: 926 FLSSFNRSNLRYMVLPKKGTSTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKKMCKDG 985
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ +++YHAGL D R Q W++ K+ V
Sbjct: 986 VRSVAYHAGLTDSEREGRQKDWLTGKIRV 1014
>gi|270010585|gb|EFA07033.1| hypothetical protein TcasGA2_TC010005 [Tribolium castaneum]
Length = 1017
Score = 88.6 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
FI SFNR N+KY ++PK V++E+ LIK ++ +SGI+YCL R +C+ +A L +
Sbjct: 482 FIRSFNRPNIKYRVIPKNGIKVVEEITKLIKQRFYRKSGIIYCLCRADCEKLAEDLCKLG 541
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A +YHAG++D +R + Q +W+ ++ HV
Sbjct: 542 IKAKAYHAGMSDSIREKQQREWMQDQFHV 570
>gi|379642609|ref|NP_001243837.1| Bloom syndrome, RecQ helicase-like [Xenopus (Silurana) tropicalis]
Length = 1327
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPKK V + + IK + SGI+YCL+R ECD++A L +
Sbjct: 769 FTMSFNRDNLKYDVLPKKPKRVALDCVEWIKKYHPNDSGIIYCLSRHECDTMADTLQKGG 828
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGLAD R+ VQ KWI+
Sbjct: 829 LAALAYHAGLADSNRDYVQHKWIN 852
>gi|395861752|ref|XP_003803142.1| PREDICTED: Bloom syndrome protein [Otolemur garnettii]
Length = 1389
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 843 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKYHPYDSGIIYCLSRRECDTMAGTLRKDG 902
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 903 LAALAYHAGLSDSERDEVQHKWIN 926
>gi|354504169|ref|XP_003514150.1| PREDICTED: Bloom syndrome protein homolog, partial [Cricetulus
griseus]
Length = 950
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 849 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 908
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 909 LAALAYHAGLSDSARDEVQNKWIN 932
>gi|403173011|ref|XP_003332116.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170091|gb|EFP87697.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1231
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQERINA 61
SFNR NL+YE+ PK K+VL ++I +I + G+SGI+YCL++K+C+ VAA L A+ RI A
Sbjct: 660 SFNRINLRYEVRPKTKDVLNDIIQIITVDHKGESGIIYCLSKKQCEEVAAHLSAKNRITA 719
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
YHAG++ R ++Q W K+ V
Sbjct: 720 HHYHAGMSKDDRQKIQHGWQVGKLQV 745
>gi|344284334|ref|XP_003413923.1| PREDICTED: Bloom syndrome protein [Loxodonta africana]
Length = 1429
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L +
Sbjct: 865 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMAETLKKNG 924
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 925 LAALAYHAGLSDCARDEVQHKWIN 948
>gi|327265368|ref|XP_003217480.1| PREDICTED: Bloom syndrome protein homolog [Anolis carolinensis]
Length = 1383
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY++LPK K+V + + I+ + SGI+YCL+R ECDS+A+ L +
Sbjct: 832 FSMSFNRHNLKYDVLPKRPKSVALDCLQWIRKYHPYDSGIIYCLSRYECDSMASNLQKAG 891
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
++A++YHAGL D+ R+ VQ KWI+
Sbjct: 892 LSALAYHAGLPDETRDIVQQKWIN 915
>gi|221044460|dbj|BAH13907.1| unnamed protein product [Homo sapiens]
Length = 519
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 40 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG 99
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 100 LAALAYHAGLSDSARDEVQQKWIN 123
>gi|409098551|ref|ZP_11218575.1| ATP-dependent DNA helicase RecQ [Pedobacter agri PB92]
Length = 729
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK+++ KE+I IK+ G+SGI+YCL+RK+ + VA AL I+
Sbjct: 202 FKSSFNRPNLFYEIRPKRDITKEIIKYIKSN-PGKSGIIYCLSRKKVEEVAEALNLNGIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K+R E Q K++ V
Sbjct: 261 ALPYHAGLEPKVRAETQDKFLMEDAEV 287
>gi|170593171|ref|XP_001901338.1| Bloom's syndrome protein homolog [Brugia malayi]
gi|158591405|gb|EDP30018.1| Bloom's syndrome protein homolog, putative [Brugia malayi]
Length = 1054
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
FISSF R NLKY+++ K L V+ +K Y +SGIVYCL+R++C+ V+ L I
Sbjct: 485 FISSFVRTNLKYDVIAKGPRSLVRVMDRMKILYPDKSGIVYCLSRRDCELVSKMLENHAI 544
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
++ YHAGL+DK R EVQ KWISN+V+V
Sbjct: 545 SSEVYHAGLSDKKRLEVQTKWISNQVNV 572
>gi|149276388|ref|ZP_01882532.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
gi|149232908|gb|EDM38283.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
Length = 729
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK++V+KE+I IK +G+SGI+YCL+RK+ + VA +L I
Sbjct: 202 FKSSFNRPNLFYEIRPKRDVIKEIIRYIKYN-TGKSGIIYCLSRKKVEEVAESLNLNGIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K+R + Q K++ V V
Sbjct: 261 ALPYHAGLEPKVRADTQDKFLMEDVEV 287
>gi|449304030|gb|EMD00038.1| hypothetical protein BAUCODRAFT_63664, partial [Baudoinia
compniacensis UAMH 10762]
Length = 533
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKNV---LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALA-Q 56
F SFNR NL YE+ PK++ L+ + +LIK ++ GQSGI+YCL+RK C+ +AA L Q
Sbjct: 225 FTRSFNRPNLYYEVRPKESKGKDLESIATLIKERHRGQSGIIYCLSRKNCEDMAADLVKQ 284
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
++ A YHAGL + R++ Q +W S HV
Sbjct: 285 HKVKAAHYHAGLTSEQRSKAQKQWQSGTYHV 315
>gi|226292234|gb|EEH47654.1| ATP-dependent DNA helicase Q1 [Paracoccidioides brasiliensis Pb18]
Length = 1550
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+ SFNR NL YE+ PK NV++ + I YSGQ+GI+YCL+R+ C+ VAA L +
Sbjct: 888 FVQSFNRPNLTYEVRPKPKNTNVIESIAETINESYSGQAGIIYCLSRRSCEKVAAQLRDK 947
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A YHAGL + R +Q W S K +V
Sbjct: 948 YKIKAAHYHAGLPSEERISIQRDWQSGKYNV 978
>gi|225681066|gb|EEH19350.1| ATP-dependent DNA helicase hus2/rqh1 [Paracoccidioides brasiliensis
Pb03]
Length = 1550
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+ SFNR NL YE+ PK NV++ + I YSGQ+GI+YCL+R+ C+ VAA L +
Sbjct: 888 FVQSFNRPNLTYEVRPKPKNTNVIESIAETINESYSGQAGIIYCLSRRSCEKVAAQLRDK 947
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A YHAGL + R +Q W S K +V
Sbjct: 948 YKIKAAHYHAGLPSEERISIQRDWQSGKYNV 978
>gi|444722124|gb|ELW62827.1| Bloom syndrome protein [Tupaia chinensis]
Length = 1266
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R ECD++A L ++
Sbjct: 661 FSMSFNRHNLKYYVLPKKPKKVAFDCLDWIRKHHPYDSGIIYCLSRHECDTMADTLRKDG 720
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 721 LAALAYHAGLSDSSRDEVQHKWIN 744
>gi|326800755|ref|YP_004318574.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
gi|326551519|gb|ADZ79904.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
Length = 729
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PKKNV+KE++ IK S +SGI+YCL+RK+ + +A L I+
Sbjct: 202 FKSSFNRPNLYYEVRPKKNVVKEIVKFIKNNPS-KSGIIYCLSRKKVEEIAEVLNINGIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R E Q K++ V V
Sbjct: 261 ALPYHAGLDAKTRAETQDKFLMEDVEV 287
>gi|149690733|ref|XP_001502766.1| PREDICTED: Bloom syndrome protein [Equus caballus]
Length = 1421
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R+ECD++A L ++
Sbjct: 859 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQKDG 918
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+ VQ KWI+
Sbjct: 919 LAALAYHAGLSDSARDAVQHKWIN 942
>gi|348580071|ref|XP_003475802.1| PREDICTED: Bloom syndrome protein-like [Cavia porcellus]
Length = 1405
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY +LPKK V + + I+ + SGI+YCL+R ECD++A L ++
Sbjct: 840 FSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRWECDTMADTLQKDG 899
Query: 59 INAISYHAGLADKLRNEVQMKWIS 82
+ A++YHAGL+D R+EVQ KWI+
Sbjct: 900 LAALAYHAGLSDAARDEVQHKWIN 923
>gi|295673364|ref|XP_002797228.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282600|gb|EEH38166.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1550
Score = 86.7 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+ SFNR NL YE+ PK NV++ + I YSGQ+GI+YCL+R+ C+ VAA L +
Sbjct: 887 FVQSFNRPNLTYEVRPKPKNTNVIESIAETINESYSGQAGIIYCLSRQSCEKVAAQLRDK 946
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A YHAGL + R +Q W S K +V
Sbjct: 947 YKIKAAHYHAGLPSEERISIQRDWQSGKYNV 977
>gi|373957711|ref|ZP_09617671.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373894311|gb|EHQ30208.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 731
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SSFNR NL YE+ K+NVLKE++ +K +++G+SGI+YCL+RK+ + VA AL+ + A+
Sbjct: 205 SSFNRGNLFYEVRAKRNVLKEIVRFVK-QHTGKSGIIYCLSRKKVEEVAEALSLNGVKAL 263
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAGL K+R + Q +++ V V
Sbjct: 264 PYHAGLDAKVRADTQDRFLMEDVDV 288
>gi|121710174|ref|XP_001272703.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
gi|119400853|gb|EAW11277.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
Length = 1542
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K V+ + + IK Y +SGIVYCL+RK C+SVA LA +
Sbjct: 904 FTQSFNRPNLTYEVRQKGKSSEVMDSIANTIKTSYPNKSGIVYCLSRKACESVAEILASK 963
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A YHAG+A R EVQ +W + +VHV
Sbjct: 964 YKIKADFYHAGVASAKRAEVQERWQTGRVHV 994
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQ 56
F SFNR NL YE+ K VL+ + +IK Y +SGI+YCL+RK C++VA AL +Q
Sbjct: 924 FTQSFNRPNLTYEVRQKTKSAEVLENIADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQ 983
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ R EVQ W S +VHV
Sbjct: 984 HNIRAEYYHAGMDSSKRAEVQEWWQSGRVHV 1014
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQ 56
F SFNR NL YE+ K VL+ + +IK Y +SGI+YCL+RK C++VA AL +Q
Sbjct: 926 FTQSFNRPNLTYEVRQKTKSAEVLENIADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQ 985
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ R EVQ W S +VHV
Sbjct: 986 HNIRAEYYHAGMDSSKRAEVQEWWQSGRVHV 1016
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQ 56
F SFNR NL YE+ K VL+ + +IK Y +SGI+YCL+RK C++VA AL +Q
Sbjct: 924 FTQSFNRPNLTYEVRQKTKSAEVLENIADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQ 983
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ R EVQ W S +VHV
Sbjct: 984 HNIRAEYYHAGMDSSKRAEVQEWWQSGRVHV 1014
>gi|242013217|ref|XP_002427311.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
gi|212511652|gb|EEB14573.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
Length = 1152
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL Y + KK + LK++ +LI+ ++S +GI+YC +RKEC+ VA L
Sbjct: 593 FLSSFNRSNLCYAVKEKKGKSTLKDIAALIQQEFSRDTGIIYCFSRKECEDVARDLKVHG 652
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I AI YHAGL D R + Q W++ KV V
Sbjct: 653 IGAIPYHAGLNDTERTKAQNLWMNGKVKV 681
>gi|308477330|ref|XP_003100879.1| hypothetical protein CRE_16178 [Caenorhabditis remanei]
gi|308264453|gb|EFP08406.1| hypothetical protein CRE_16178 [Caenorhabditis remanei]
Length = 607
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR+NLKY++LPKK ++E+ ++IK ++SG++GI+YCL+R +C+ VA +L
Sbjct: 253 FRAGFNRSNLKYQVLPKKGSEDECVEEIAAIIKQRFSGETGIIYCLSRNDCEKVAKSLKT 312
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ I A YHA + R+ WIS K+ V
Sbjct: 313 QGIRAKHYHAYMEPNDRSACHQSWISGKIQV 343
>gi|452978196|gb|EME77960.1| hypothetical protein MYCFIDRAFT_216933 [Pseudocercospora fijiensis
CIRAD86]
Length = 1607
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL Y +LPK K ++ + +IK ++ +GI+YCL+RK C+ +AAAL E
Sbjct: 898 FTSSFNRTNLSYSVLPKPKGKQDVQSMAEVIKKDHAKDTGIIYCLSRKNCEDIAAALVNE 957
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ + +VQ +W + VHV
Sbjct: 958 HRIKAKHYHAGMDSIAKADVQKEWQAGHVHV 988
>gi|387791080|ref|YP_006256145.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379653913|gb|AFD06969.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 729
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PKKN LKE+I IK++ +G++GI+YCL+RK+ + VA L I
Sbjct: 202 FKSSFNRPNLFYEIRPKKNELKEIIKYIKSQ-NGKAGIIYCLSRKKVEEVAETLNVNGIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL R Q K++ V V
Sbjct: 261 ALPYHAGLDANTRATTQDKFLMEDVQV 287
>gi|308481757|ref|XP_003103083.1| hypothetical protein CRE_25739 [Caenorhabditis remanei]
gi|308260459|gb|EFP04412.1| hypothetical protein CRE_25739 [Caenorhabditis remanei]
Length = 630
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR+NLKY++LPKK ++E+ ++IK ++SG++GI+YCL+R +C+ VA +L
Sbjct: 272 FRAGFNRSNLKYQVLPKKGNEDECVEEIAAIIKKRFSGETGIIYCLSRNDCEKVAKSLKA 331
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ I A YHA + R+ WIS K+ V
Sbjct: 332 QVIRAKHYHAYMEPNDRSACHQSWISGKIQV 362
>gi|428173190|gb|EKX42094.1| BLM RecQ DNA helicase family member, partial [Guillardia theta
CCMP2712]
Length = 412
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEIL--PKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+ SFNR NL+YE+ KK + + + IK Y G++GI+YCL++ C+ +AA + + +
Sbjct: 209 FMQSFNRPNLRYEVRKKEKKKSAENIATFIKENYPGETGIIYCLSKNRCEEMAAKMQEFK 268
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A+ YHAGL D+ R Q +W ++K HV
Sbjct: 269 IKALPYHAGLDDQTRKFNQDQWSNDKTHV 297
>gi|325103763|ref|YP_004273417.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
gi|324972611|gb|ADY51595.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
Length = 728
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PK NV K++I IK G+SGIVYCL+RK+ + VA AL I
Sbjct: 202 FKSSFNRGNLFYEVRPKGNVFKDIIKYIKNN-PGKSGIVYCLSRKKVEEVANALEINGIR 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
++ YHAGL K+R + Q K++ +V V
Sbjct: 261 SLPYHAGLDAKVRADTQDKFLMEEVDV 287
>gi|300771774|ref|ZP_07081645.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
gi|300761160|gb|EFK57985.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
Length = 729
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ KKNV+KE++ IK SG++GIVYCL+RK+ + +A L I
Sbjct: 202 FKSSFNRTNLYYEVRTKKNVVKEIVRFIKNN-SGKTGIVYCLSRKKVEEIAEVLNINGIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R + Q K++ V V
Sbjct: 261 ALPYHAGLDAKTRADTQDKFLMEDVEV 287
>gi|257458284|ref|ZP_05623433.1| ATP-dependent DNA helicase RecQ [Treponema vincentii ATCC 35580]
gi|257444311|gb|EEV19405.1| ATP-dependent DNA helicase RecQ [Treponema vincentii ATCC 35580]
Length = 650
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI+ FNR N+ E+ PK+N L+EVI+ I+ K+SG+SGI+YC +R + D++ L +
Sbjct: 215 FIAGFNRPNIFLEVRPKRNALREVIACIE-KHSGESGIIYCFSRNQVDTLTEKLKDSGYS 273
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
++YHAGL+D+ R + Q ++I +K+ + TV
Sbjct: 274 VLNYHAGLSDEERKDHQQQFIRDKIRIMVATV 305
>gi|227540043|ref|ZP_03970092.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
gi|227240118|gb|EEI90133.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
Length = 729
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ KKNV+KE++ IK SG++GIVYCL+RK+ + +A L I
Sbjct: 202 FKSSFNRTNLYYEVRTKKNVVKEIVRFIKNN-SGKTGIVYCLSRKKVEEIAEVLNINGIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R + Q K++ V V
Sbjct: 261 ALPYHAGLDAKTRADTQDKFLMEDVEV 287
>gi|358054510|dbj|GAA99436.1| hypothetical protein E5Q_06135 [Mixia osmundae IAM 14324]
Length = 1229
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQERINA 61
SFNR NL+YE+ PK K ++K++ LIK ++G GI+YCL++K+C+ +A AL Q + A
Sbjct: 690 SFNRPNLRYEVRPKGKLIIKDISDLIKRDFAGLCGIIYCLSKKQCEDIAEALKTQHGVKA 749
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQERIN 110
YHAG+A R +Q W K+HV C ++A + ++ N
Sbjct: 750 HHYHAGMAKDDRIRIQADWQRGKIHV--------VCATIAFGMGIDKAN 790
>gi|320167845|gb|EFW44744.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1784
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F+ SFNR NL+Y++ K K L ++ +IK ++ SGIVYCL+RK+C++VA L Q I
Sbjct: 1022 FVQSFNRENLRYQVYKKDKTTLDDIARMIKKQWPKDSGIVYCLSRKDCETVARELVQRGI 1081
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R VQ WI N+ V
Sbjct: 1082 AATFYHAGMDPGDRAVVQRDWIGNRKQV 1109
>gi|167535712|ref|XP_001749529.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771921|gb|EDQ85580.1| predicted protein [Monosiga brevicollis MX1]
Length = 2199
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 56/87 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PKK L I+ I AK G SGIVYC++R++ ++ A L + I
Sbjct: 794 FQSSFNRTNLFYEVRPKKKSLFADIAAIVAKNRGSSGIVYCMSRRDAETTALDLQRRGIK 853
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAGL LR+EVQ W ++ +
Sbjct: 854 ALAYHAGLDPGLRSEVQDVWARSRADI 880
>gi|255932597|ref|XP_002557855.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582474|emb|CAP80660.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1511
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK-KN--VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+ SFNR NL YE+ K KN VL + I + Y Q GI+YCL+RK CD VA L ++
Sbjct: 838 FLQSFNRPNLTYEVRSKGKNDEVLASMAETITSSYQNQCGIIYCLSRKTCDKVAEDLQKK 897
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A++YHAG++ K+++E Q KW +VH+
Sbjct: 898 YHLKALAYHAGMSAKVKSEAQRKWQMGRVHI 928
>gi|195571657|ref|XP_002103819.1| GD20640 [Drosophila simulans]
gi|194199746|gb|EDX13322.1| GD20640 [Drosophila simulans]
Length = 1473
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 1 FISSFNRANLKYEILPKKNV--LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F+SSFNR+NL+Y +LPKK V L ++ I++K + SGI+YCL+RKECD + + ++
Sbjct: 937 FLSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKKMCKDG 996
Query: 59 INAISYHAGLAD 70
I A+SYHAGL D
Sbjct: 997 IRAVSYHAGLTD 1008
>gi|401401364|ref|XP_003880993.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
gi|325115405|emb|CBZ50960.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
Length = 1699
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE- 57
F SF+R NL+YE+ PK K +++++ + IK ++ G SGIVYCL+R+EC+ VA L +
Sbjct: 857 FQGSFDRPNLRYEVRPKVTKRIIEDIATTIKTEFDGLSGIVYCLSRRECERVAEGLQKHA 916
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI+A YHA L + R E+Q W+++ + V
Sbjct: 917 RISAGFYHAQLDPEKREEIQRDWMNDDIKV 946
>gi|374572158|ref|ZP_09645254.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM471]
gi|374420479|gb|EHR00012.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM471]
Length = 621
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 59/82 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++YEI+ K+N + ++ LI+ +++G +G+VYCL+RK + VAAAL I
Sbjct: 209 FVSSFDRPNIRYEIVDKRNAVSQLKDLIRERHAGDAGVVYCLSRKRVEEVAAALDDAGIA 268
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R+ Q ++++
Sbjct: 269 ALPYHAGLDSSVRSRNQDRFLN 290
>gi|433468509|ref|ZP_20425946.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 98080]
gi|432206595|gb|ELK62602.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 98080]
Length = 766
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|304389100|ref|ZP_07371144.1| ATP-dependent helicase RecQ [Neisseria meningitidis ATCC 13091]
gi|304336973|gb|EFM03163.1| ATP-dependent helicase RecQ [Neisseria meningitidis ATCC 13091]
Length = 766
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|421558313|ref|ZP_16004196.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 92045]
gi|402338495|gb|EJU73728.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 92045]
Length = 766
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|433512637|ref|ZP_20469439.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 63049]
gi|432250392|gb|ELL05787.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 63049]
Length = 766
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|433508276|ref|ZP_20465162.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 12888]
gi|432249927|gb|ELL05325.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 12888]
Length = 766
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|421537312|ref|ZP_15983500.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 93003]
gi|402319789|gb|EJU55294.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 93003]
Length = 766
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|385342692|ref|YP_005896563.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M01-240149]
gi|385856414|ref|YP_005902926.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NZ-05/33]
gi|325202898|gb|ADY98352.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M01-240149]
gi|325207303|gb|ADZ02755.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NZ-05/33]
Length = 766
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|298705316|emb|CBJ49006.1| DNA helicase recq1, putative [Ectocarpus siliculosus]
Length = 678
Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVI----SLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F SSFNRANL+YE++ K KE + SLIK Y GQ+GIVY +RKE VAA L
Sbjct: 176 FKSSFNRANLRYEVVEKPEAAKESLELLASLIKDSYRGQAGIVYAFSRKEASDVAAGLGA 235
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAG ++ R+ VQ W+ V V
Sbjct: 236 RGVPAAFYHAGQEERERSRVQQAWMRGDVPV 266
>gi|385339315|ref|YP_005893187.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis G2136]
gi|416200366|ref|ZP_11619632.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 961-5945]
gi|325143114|gb|EGC65461.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 961-5945]
gi|325197559|gb|ADY93015.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis G2136]
Length = 766
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|121634143|ref|YP_974388.1| ATP-dependent DNA helicase [Neisseria meningitidis FAM18]
gi|416179719|ref|ZP_11611155.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M6190]
gi|416190106|ref|ZP_11615586.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis ES14902]
gi|433491762|ref|ZP_20448864.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM586]
gi|433493868|ref|ZP_20450944.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM762]
gi|433495985|ref|ZP_20453034.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M7089]
gi|433498098|ref|ZP_20455114.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M7124]
gi|433500061|ref|ZP_20457052.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM174]
gi|433503659|ref|ZP_20460614.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM126]
gi|120865849|emb|CAM09582.1| ATP-dependent DNA helicase [Neisseria meningitidis FAM18]
gi|325131581|gb|EGC54288.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M6190]
gi|325139164|gb|EGC61710.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis ES14902]
gi|432230782|gb|ELK86454.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM586]
gi|432232046|gb|ELK87701.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM762]
gi|432236865|gb|ELK92469.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M7124]
gi|432237627|gb|ELK93220.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M7089]
gi|432237773|gb|ELK93364.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM174]
gi|432238861|gb|ELK94424.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM126]
Length = 766
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|254805685|ref|YP_003083906.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha14]
gi|254669227|emb|CBA08061.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha14]
Length = 766
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|254674137|emb|CBA09921.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha275]
Length = 766
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|385327641|ref|YP_005881944.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha710]
gi|421556269|ref|ZP_16002186.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 80179]
gi|308388493|gb|ADO30813.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha710]
gi|402338122|gb|EJU73361.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 80179]
Length = 766
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|421554021|ref|ZP_15999972.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 98008]
gi|402334057|gb|EJU69352.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 98008]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|421560433|ref|ZP_16006292.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM2657]
gi|254671564|emb|CBA09207.1| ATP-dependent DNA helicase [Neisseria meningitidis alpha153]
gi|402340606|gb|EJU75806.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM2657]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|242764771|ref|XP_002340840.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
gi|218724036|gb|EED23453.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
Length = 1574
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 4 SFNRANLKYEILPKK----NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ-ER 58
SFNR NL Y++LPKK +++ ++ +I+ Y ++GIVYCL+RK+C+ VA L++ +
Sbjct: 899 SFNRPNLTYDVLPKKGSAPDIISQIADIIQTSYKRKAGIVYCLSRKDCEKVAQELSKGYK 958
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+A R VQ W S K V
Sbjct: 959 IKATHYHAGMASAERTAVQRDWQSGKYDV 987
>gi|416167995|ref|ZP_11607825.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis OX99.30304]
gi|325131001|gb|EGC53728.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis OX99.30304]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|421543675|ref|ZP_15989766.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM140]
gi|421545736|ref|ZP_15991796.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM183]
gi|421547803|ref|ZP_15993835.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM2781]
gi|421552015|ref|ZP_15997996.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM576]
gi|402325964|gb|EJU61371.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM183]
gi|402326517|gb|EJU61919.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM140]
gi|402327823|gb|EJU63210.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM2781]
gi|402332931|gb|EJU68249.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM576]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|385323418|ref|YP_005877857.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 8013]
gi|261391805|emb|CAX49260.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 8013]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|218768944|ref|YP_002343456.1| ATP-dependent DNA helicase [Neisseria meningitidis Z2491]
gi|385338828|ref|YP_005892701.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis WUE 2594]
gi|433474753|ref|ZP_20432101.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 88050]
gi|433478986|ref|ZP_20436285.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 63041]
gi|433514627|ref|ZP_20471403.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2004090]
gi|433516864|ref|ZP_20473617.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 96023]
gi|433519054|ref|ZP_20475780.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 65014]
gi|433523180|ref|ZP_20479852.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 97020]
gi|433527443|ref|ZP_20484056.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3652]
gi|433529536|ref|ZP_20486135.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3642]
gi|433531654|ref|ZP_20488223.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2007056]
gi|433533701|ref|ZP_20490250.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2001212]
gi|433540209|ref|ZP_20496666.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 63006]
gi|121052952|emb|CAM09306.1| ATP-dependent DNA helicase [Neisseria meningitidis Z2491]
gi|319411242|emb|CBY91649.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis WUE 2594]
gi|432212813|gb|ELK68748.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 88050]
gi|432218960|gb|ELK74812.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 63041]
gi|432256078|gb|ELL11403.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 96023]
gi|432256291|gb|ELL11614.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2004090]
gi|432256795|gb|ELL12109.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 65014]
gi|432262636|gb|ELL17872.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 97020]
gi|432267512|gb|ELL22690.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3652]
gi|432269674|gb|ELL24831.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2007056]
gi|432269787|gb|ELL24940.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3642]
gi|432274254|gb|ELL29347.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2001212]
gi|432278190|gb|ELL33234.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 63006]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|418287489|ref|ZP_12900085.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM233]
gi|418289739|ref|ZP_12901988.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM220]
gi|372203023|gb|EHP16760.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM220]
gi|372203713|gb|EHP17327.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM233]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|416186301|ref|ZP_11613662.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M0579]
gi|325137100|gb|EGC59696.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M0579]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|302789379|ref|XP_002976458.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
gi|300156088|gb|EFJ22718.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
Length = 711
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVIS----LIKAKY-SGQSGIVYCLTRKECDSVAAALA 55
F SS NR NL YE+ KK V +VI IK Y S +SGIVYC +RKEC+ VA AL
Sbjct: 263 FTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALR 322
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ +I+A YHA + LR V +W SN++ V
Sbjct: 323 KRQISAAHYHADMDSGLRTNVHRRWSSNQLQV 354
>gi|302811147|ref|XP_002987263.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
gi|300144898|gb|EFJ11578.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
Length = 711
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVIS----LIKAKY-SGQSGIVYCLTRKECDSVAAALA 55
F SS NR NL YE+ KK V +VI IK Y S +SGIVYC +RKEC+ VA AL
Sbjct: 263 FTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALR 322
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ +I+A YHA + LR V +W SN++ V
Sbjct: 323 KRQISAAHYHADMDSGLRTNVHRRWSSNQLQV 354
>gi|389604908|emb|CCA43834.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis alpha522]
Length = 766
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|161870789|ref|YP_001599962.1| ATP-dependent DNA helicase [Neisseria meningitidis 053442]
gi|161596342|gb|ABX74002.1| ATP-dependent DNA helicase [Neisseria meningitidis 053442]
Length = 727
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 158 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 217
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 218 AIPYHAGLSMDVREENQRRF 237
>gi|429218110|ref|YP_007179754.1| ATP-dependent DNA helicase RecQ [Deinococcus peraridilitoris DSM
19664]
gi|429128973|gb|AFZ65988.1| ATP-dependent DNA helicase RecQ [Deinococcus peraridilitoris DSM
19664]
Length = 726
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y I+ K N L++++ I+A++ G +GIVYCL+RK + AA LA + ++
Sbjct: 200 FISSFDRPNIHYRIVEKNNALRQLLEFIRAEHDGDAGIVYCLSRKSVEESAAWLAAQGVS 259
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 260 ALPYHAGLGPEVRARHQERFL 280
>gi|296313525|ref|ZP_06863466.1| ATP-dependent DNA helicase RecQ [Neisseria polysaccharea ATCC
43768]
gi|296839945|gb|EFH23883.1| ATP-dependent DNA helicase RecQ [Neisseria polysaccharea ATCC
43768]
Length = 761
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQHRF 276
>gi|115399192|ref|XP_001215185.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192068|gb|EAU33768.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1367
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK--KN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK KN +L + ++I KY QSGI+YCL+R C+ VA +L ++
Sbjct: 894 FSQSFNRPNLTYEVRPKPSKNELLASIANIITTKYPNQSGIIYCLSRDSCEKVAKSLRED 953
Query: 58 R-INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ RN+VQ W + + HV
Sbjct: 954 YGIKAEHYHAGMKPDERNQVQHGWQAGRSHV 984
>gi|421562493|ref|ZP_16008320.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM2795]
gi|421907529|ref|ZP_16337404.1| DNA helicase [Neisseria meningitidis alpha704]
gi|393291198|emb|CCI73398.1| DNA helicase [Neisseria meningitidis alpha704]
gi|402343149|gb|EJU78304.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM2795]
Length = 766
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVARFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|433535930|ref|ZP_20492449.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 77221]
gi|432276351|gb|ELL31409.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 77221]
Length = 766
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|261378512|ref|ZP_05983085.1| ATP-dependent DNA helicase RecQ [Neisseria cinerea ATCC 14685]
gi|269145061|gb|EEZ71479.1| ATP-dependent DNA helicase RecQ [Neisseria cinerea ATCC 14685]
Length = 766
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|421568457|ref|ZP_16014180.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3001]
gi|402341399|gb|EJU76578.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3001]
Length = 766
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|421549832|ref|ZP_15995842.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 69166]
gi|433466388|ref|ZP_20423851.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 87255]
gi|433470476|ref|ZP_20427876.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 68094]
gi|433476851|ref|ZP_20434179.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 70012]
gi|433525263|ref|ZP_20481909.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 69096]
gi|433538035|ref|ZP_20494522.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 70030]
gi|402331783|gb|EJU67115.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 69166]
gi|432205176|gb|ELK61207.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 87255]
gi|432211909|gb|ELK67853.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 68094]
gi|432218004|gb|ELK73869.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 70012]
gi|432263411|gb|ELL18631.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 69096]
gi|432276175|gb|ELL31237.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 70030]
Length = 766
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMTGQSGIVYCLSRKKVEDVARFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL +R E Q ++
Sbjct: 257 AIPYHAGLGMDVREENQRRF 276
>gi|320581820|gb|EFW96039.1| ATP-dependent helicase [Ogataea parapolymorpha DL-1]
Length = 1277
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR+NL YE+LPKK V++E+ LI KY +GI+YC ++ C+ A LA I
Sbjct: 714 FKQSFNRSNLYYEVLPKKKTVVEEIAQLINRKYKNMTGIIYCHSKNSCEQTATRLADYGI 773
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ+ W +N++ V
Sbjct: 774 KCDFYHAGMTQDDRQRVQLGWQTNEIQV 801
>gi|385854449|ref|YP_005900962.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M01-240355]
gi|325203390|gb|ADY98843.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M01-240355]
Length = 766
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|386399772|ref|ZP_10084550.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM1253]
gi|385740398|gb|EIG60594.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. WSM1253]
Length = 623
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 58/82 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++YEI+ K+N + ++ I+ +++G +G+VYCL+RK + VAAAL I
Sbjct: 211 FVSSFDRPNIRYEIVDKRNAVSQLKDFIRERHAGDAGVVYCLSRKRVEEVAAALDDAGIA 270
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R+ Q ++++
Sbjct: 271 ALPYHAGLDSSVRSRNQDRFLN 292
>gi|170780514|ref|YP_001708846.1| helicase [Clavibacter michiganensis subsp. sepedonicus]
gi|169155082|emb|CAQ00181.1| putative helicase [Clavibacter michiganensis subsp. sepedonicus]
Length = 653
Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PK K+++ LI+ +++G +GIVYCL+RK + A AL ++ I
Sbjct: 237 FVSSFDRPNIRYRIVPKAEPRKQLVDLIRTEHAGDAGIVYCLSRKTVEQTAEALNKQGIT 296
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 297 ALPYHAGLDAAVRQRNQARFL 317
>gi|421564547|ref|ZP_16010346.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3081]
gi|402346144|gb|EJU81248.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM3081]
Length = 766
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|148271976|ref|YP_001221537.1| putative ATP-dependent DNA helicase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829906|emb|CAN00831.1| putative ATP-dependent DNA helicase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 627
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PK K+++ LIK +++G +GIVYCL+RK + A AL ++ I
Sbjct: 212 FVSSFDRPNIRYRIVPKAEPRKQLVDLIKNEHAGDAGIVYCLSRKTVEQTAEALNKQGIA 271
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 272 ALPYHAGLDAAVRQRNQARFL 292
>gi|390357198|ref|XP_781064.3| PREDICTED: uncharacterized protein LOC575579 [Strongylocentrotus
purpuratus]
Length = 1391
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Query: 3 SSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
SSF+R+NL + + K+ +++ + LI +++ G+SGIVYCL+R EC+ VA L+ I
Sbjct: 969 SSFDRSNLMFRVEKKQPSKMIENITKLINSQFKGKSGIVYCLSRNECEKVADDLSNAGIK 1028
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQER 108
A YHAG +DK R+ VQ +WI+ G + VV C ++A + ++
Sbjct: 1029 ASPYHAGQSDKERSTVQTRWIN-----GQYKVV---CATIAFGMGIDK 1068
>gi|325093139|gb|EGC46449.1| RecQ family helicase MusN [Ajellomyces capsulatus H88]
Length = 1559
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ- 56
F+ SFNR NL YE+ K NV+ + IK Y+GQ+GI+YCL+R+ C+ VA L +
Sbjct: 878 FVQSFNRPNLIYEVRQKPKGTNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRET 937
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+INA YHAGL + R +Q W S K V
Sbjct: 938 HKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
>gi|240275770|gb|EER39283.1| RecQ family helicase MusN [Ajellomyces capsulatus H143]
Length = 1559
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ- 56
F+ SFNR NL YE+ K NV+ + IK Y+GQ+GI+YCL+R+ C+ VA L +
Sbjct: 878 FVQSFNRPNLIYEVRQKPKGTNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRET 937
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+INA YHAGL + R +Q W S K V
Sbjct: 938 HKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
>gi|225563190|gb|EEH11469.1| RecQ family helicase MusN [Ajellomyces capsulatus G186AR]
Length = 1559
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ- 56
F+ SFNR NL YE+ K NV+ + IK Y+GQ+GI+YCL+R+ C+ VA L +
Sbjct: 878 FVQSFNRPNLIYEVRQKPKGTNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRET 937
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+INA YHAGL + R +Q W S K V
Sbjct: 938 HKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
>gi|154281633|ref|XP_001541629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411808|gb|EDN07196.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1557
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ- 56
F+ SFNR NL YE+ K NV+ + IK Y+GQ+GI+YCL+R+ C+ VA L +
Sbjct: 878 FVQSFNRPNLIYEVRQKPKGTNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRET 937
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+INA YHAGL + R +Q W S K V
Sbjct: 938 HKINAAHYHAGLPAEDRISIQTDWQSGKCSV 968
>gi|345564877|gb|EGX47836.1| hypothetical protein AOL_s00083g48 [Arthrobotrys oligospora ATCC
24927]
Length = 1720
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+L K V++++I+LI+ Y G+ GIVYCL++ +C+ V++ L +
Sbjct: 1073 FKQSFNRPNLVYEVLEKVKGGQVVQDIINLIQTSYKGKCGIVYCLSKNDCEQVSSHLQKA 1132
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAGL R VQ +W ++ V
Sbjct: 1133 RILANFYHAGLTTDERRNVQKRWQCGELKV 1162
>gi|15676198|ref|NP_273330.1| ATP-dependent DNA helicase [Neisseria meningitidis MC58]
gi|385850536|ref|YP_005897051.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M04-240196]
gi|385852474|ref|YP_005898988.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis H44/76]
gi|416181472|ref|ZP_11611666.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M13399]
gi|416194986|ref|ZP_11617567.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis CU385]
gi|416211791|ref|ZP_11621545.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M01-240013]
gi|427827004|ref|ZP_18994049.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis H44/76]
gi|433464257|ref|ZP_20421751.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM422]
gi|433487462|ref|ZP_20444641.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M13255]
gi|433489636|ref|ZP_20446775.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM418]
gi|433504053|ref|ZP_20460998.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 9506]
gi|433506317|ref|ZP_20463236.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 9757]
gi|433510534|ref|ZP_20467377.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 4119]
gi|7225499|gb|AAF40728.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis MC58]
gi|316985205|gb|EFV64157.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis H44/76]
gi|325135078|gb|EGC57706.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M13399]
gi|325141111|gb|EGC63614.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis CU385]
gi|325145268|gb|EGC67547.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M01-240013]
gi|325199478|gb|ADY94933.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis H44/76]
gi|325205359|gb|ADZ00812.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M04-240196]
gi|432206067|gb|ELK62082.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM422]
gi|432226227|gb|ELK81960.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis M13255]
gi|432230632|gb|ELK86307.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM418]
gi|432243436|gb|ELK98947.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 9506]
gi|432244333|gb|ELK99828.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 9757]
gi|432250602|gb|ELL05995.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 4119]
Length = 766
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|91772141|ref|YP_564833.1| ATP-dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
gi|91711156|gb|ABE51083.1| ATP dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
Length = 647
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SF+RANL YEI PK N +++S +K + G SGI+YC +RK +SV+ L +E +
Sbjct: 192 YVASFDRANLSYEIRPKNNTYGDMVSYLKGQ-RGNSGIIYCNSRKSVESVSTKLNREGFH 250
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL D R + Q ++I + V +
Sbjct: 251 ALPYHAGLNDAKRQDNQERFIRDDVDI 277
>gi|421862647|ref|ZP_16294352.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379771|emb|CBX21547.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 766
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGFN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL +R E Q ++
Sbjct: 257 AIPYHAGLGMDVREENQRRF 276
>gi|268682962|ref|ZP_06149824.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae PID332]
gi|268623246|gb|EEZ55646.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae PID332]
Length = 767
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|358367182|dbj|GAA83801.1| RecQ family helicase MusN [Aspergillus kawachii IFO 4308]
Length = 1549
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK VL + IK Y+ +SGIVYCL+RK C+ VA+ L +
Sbjct: 907 FSQSFNRPNLTYEVRIKKKGTEVLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDD 966
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ R ++Q W + + HV
Sbjct: 967 YRIKAEHYHAGMDSGERAKIQQAWQAGRTHV 997
>gi|268687390|ref|ZP_06154252.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae SK-93-1035]
gi|268627674|gb|EEZ60074.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae SK-93-1035]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|4105528|gb|AAD05424.1| RecQ [Neisseria gonorrhoeae]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|268597656|ref|ZP_06131823.1| ATP-dependent DNA helicase recQ [Neisseria gonorrhoeae FA19]
gi|268551444|gb|EEZ46463.1| ATP-dependent DNA helicase recQ [Neisseria gonorrhoeae FA19]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|59802043|ref|YP_208755.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae FA 1090]
gi|254494596|ref|ZP_05107767.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae 1291]
gi|268599907|ref|ZP_06134074.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae MS11]
gi|293398083|ref|ZP_06642288.1| ATP-dependent DNA helicase RecQ [Neisseria gonorrhoeae F62]
gi|59718938|gb|AAW90343.1| putative ATP-dependent DNA helicase [Neisseria gonorrhoeae FA 1090]
gi|226513636|gb|EEH62981.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae 1291]
gi|268584038|gb|EEZ48714.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae MS11]
gi|291611346|gb|EFF40416.1| ATP-dependent DNA helicase RecQ [Neisseria gonorrhoeae F62]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|268604508|ref|ZP_06138675.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae PID1]
gi|268685128|ref|ZP_06151990.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae SK-92-679]
gi|268588639|gb|EEZ53315.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae PID1]
gi|268625412|gb|EEZ57812.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae SK-92-679]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|240014970|ref|ZP_04721883.1| RecQ [Neisseria gonorrhoeae DGI18]
gi|240017418|ref|ZP_04723958.1| RecQ [Neisseria gonorrhoeae FA6140]
gi|240122039|ref|ZP_04735001.1| RecQ [Neisseria gonorrhoeae PID24-1]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|268602242|ref|ZP_06136409.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae PID18]
gi|291042907|ref|ZP_06568648.1| ATP-dependent DNA helicase recQ [Neisseria gonorrhoeae DGI2]
gi|268586373|gb|EEZ51049.1| ATP-dependent DNA helicase [Neisseria gonorrhoeae PID18]
gi|291013341|gb|EFE05307.1| ATP-dependent DNA helicase recQ [Neisseria gonorrhoeae DGI2]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|268595624|ref|ZP_06129791.1| ATP-dependent DNA helicase recQ [Neisseria gonorrhoeae 35/02]
gi|268549013|gb|EEZ44431.1| ATP-dependent DNA helicase recQ [Neisseria gonorrhoeae 35/02]
Length = 767
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 198 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|363748979|ref|XP_003644707.1| hypothetical protein Ecym_2138 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888340|gb|AET37890.1| Hypothetical protein Ecym_2138 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1394
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL Y++L K KN + E+ IK K+ GQ+GIVYC ++ C+ AA + + +
Sbjct: 821 SFNRTNLYYQVLRKSKNSMDEICETIKTKFRGQTGIVYCHSKNSCEQTAATMVRSGVKCA 880
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R +VQ W SNKV V
Sbjct: 881 YYHAGMDPDERLQVQQGWQSNKVQV 905
>gi|194099615|ref|YP_002002746.1| RecQ protein [Neisseria gonorrhoeae NCCP11945]
gi|385336561|ref|YP_005890508.1| RecQ protein [Neisseria gonorrhoeae TCDC-NG08107]
gi|193934905|gb|ACF30729.1| RecQ [Neisseria gonorrhoeae NCCP11945]
gi|317165104|gb|ADV08645.1| RecQ [Neisseria gonorrhoeae TCDC-NG08107]
Length = 757
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + A L + +N
Sbjct: 188 FVSSFDRTNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLN 247
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 248 AIPYHAGLSMDVREENQRRF 267
>gi|146165477|ref|XP_001015163.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila]
gi|146145471|gb|EAR94918.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila SB210]
Length = 1198
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEI--LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQE 57
F SSFNR NL Y++ +P+K ++ +++ IK K++ QSGI+YC T+K+ + +A+ L Q
Sbjct: 591 FQSSFNRTNLYYDVVRIPQKVTIEHMVNFIKEKFNKQSGIIYCCTKKDSEELASKLNIQY 650
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+INA YH + DK + +VQ W+SN + V
Sbjct: 651 KINAAYYHGSMNDKEKEQVQQLWMSNDIQV 680
>gi|406699602|gb|EKD02803.1| hypothetical protein A1Q2_02878 [Trichosporon asahii var. asahii
CBS 8904]
Length = 929
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ PK KNVL+++++ IK + G SGIVYC +R++C+ +A L + I A
Sbjct: 374 SFNRPNLHYEVRPKQKNVLEKIVNFIKTQTQGVSGIVYCSSREKCEIIAKELRDKDIRAW 433
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R ++Q W +K V
Sbjct: 434 HYHAGMTKGDRRKIQEGWQEHKFEV 458
>gi|358447908|ref|ZP_09158417.1| ATP-dependent DNA helicase RecQ, partial [Marinobacter
manganoxydans MnI7-9]
gi|357227798|gb|EHJ06254.1| ATP-dependent DNA helicase RecQ, partial [Marinobacter
manganoxydans MnI7-9]
Length = 603
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+S F+R N++Y I PK N K+++ IKA++ G GIVYCL+R + D+ A LAQ+
Sbjct: 213 FVSGFDRPNIQYRIAPKINANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAKTLAQKGYT 272
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ + R Q +++
Sbjct: 273 ALPYHAGLSSEQRAHHQERFL 293
>gi|385331459|ref|YP_005885410.1| ATP-dependent DNA helicase RecQ [Marinobacter adhaerens HP15]
gi|311694609|gb|ADP97482.1| ATP-dependent DNA helicase RecQ [Marinobacter adhaerens HP15]
Length = 622
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+S F+R N++Y I PK N K+++ IKA++ G GIVYCL+R + D+ A LAQ+
Sbjct: 213 FVSGFDRPNIQYRIAPKINANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAKTLAQKGYT 272
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ + R Q +++
Sbjct: 273 ALPYHAGLSSEQRAHHQERFL 293
>gi|354566185|ref|ZP_08985358.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
gi|353546693|gb|EHC16141.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
Length = 719
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PKK N E++ LI+ S SGI+YCLTRK+ D + L ++++
Sbjct: 203 IASFNRQNLYYEVRPKKKNAYAELLELIRD--SEGSGIIYCLTRKKVDEITFKLQHDQVS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAGL D+ R + Q ++I + V V T+
Sbjct: 261 ALPYHAGLTDEERTQNQTRFIRDDVRVMVATI 292
>gi|398825380|ref|ZP_10583678.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. YR681]
gi|398223762|gb|EJN10096.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. YR681]
Length = 621
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 58/82 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++YEI+ K+N + ++ I+ +++G +G+VYCL+R + VAAAL + I
Sbjct: 209 FVSSFDRPNIRYEIVDKRNAVSQLKDFIRERHAGDAGVVYCLSRNRVEEVAAALDEAGIA 268
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R+ Q ++++
Sbjct: 269 ALPYHAGLDSNVRSRNQDRFLN 290
>gi|110833596|ref|YP_692455.1| ATP-dependent DNA helicase RecQ [Alcanivorax borkumensis SK2]
gi|110646707|emb|CAL16183.1| ATP-dependent DNA helicase RecQ [Alcanivorax borkumensis SK2]
Length = 713
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 58/81 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I K +++ L++A+++G++GIVYCL+R + D VA L Q+ IN
Sbjct: 196 FVSSFDRPNIQYRIERKDGARNQLLRLLRAEHAGEAGIVYCLSRNKVDRVAEWLCQQGIN 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R + Q +++
Sbjct: 256 ALPYHAGLSGPMREKHQQRFL 276
>gi|224123710|ref|XP_002330189.1| predicted protein [Populus trichocarpa]
gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RIN 60
+SF+R NLKYE++ K K LK++ L++ ++ Q GIVYCL++ EC V+ L ++ +I
Sbjct: 375 TSFDRPNLKYEVIGKTKESLKQLGDLLRDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIK 434
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL + R +VQ KW + +VH+
Sbjct: 435 AVYYHAGLGARQRVDVQRKWHTGEVHI 461
>gi|118489987|gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 617
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RIN 60
+SF+R NLKYE++ K K LK++ L++ ++ Q GIVYCL++ EC V+ L ++ +I
Sbjct: 404 TSFDRPNLKYEVIGKTKESLKQLGDLLRDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIK 463
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL + R +VQ KW + +VH+
Sbjct: 464 AVYYHAGLGARQRVDVQRKWHTGEVHI 490
>gi|401887675|gb|EJT51654.1| hypothetical protein A1Q1_07066 [Trichosporon asahii var. asahii
CBS 2479]
Length = 929
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ PK KNVL+++++ IK + G SGIVYC +R++C+ +A L + I A
Sbjct: 374 SFNRPNLHYEVRPKQKNVLEKIVNFIKTQTQGVSGIVYCSSREKCEIIAKELRDKDIRAW 433
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R ++Q W +K V
Sbjct: 434 HYHAGMTKGDRRKIQEGWQEHKFEV 458
>gi|319638797|ref|ZP_07993555.1| RecQ protein [Neisseria mucosa C102]
gi|317399701|gb|EFV80364.1| RecQ protein [Neisseria mucosa C102]
Length = 769
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + VA L + +
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLCENGLE 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|261400504|ref|ZP_05986629.1| ATP-dependent DNA helicase RecQ [Neisseria lactamica ATCC 23970]
gi|269209764|gb|EEZ76219.1| ATP-dependent DNA helicase RecQ [Neisseria lactamica ATCC 23970]
Length = 767
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 198 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGLN 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL +R E Q ++
Sbjct: 258 AIPYHAGLGMDVREENQRRF 277
>gi|261379595|ref|ZP_05984168.1| ATP-dependent DNA helicase RecQ [Neisseria subflava NJ9703]
gi|284798073|gb|EFC53420.1| ATP-dependent DNA helicase RecQ [Neisseria subflava NJ9703]
Length = 769
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + VA L + +
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLCENGLE 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|255542856|ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communis]
gi|223548452|gb|EEF49943.1| DNA helicase hus2, putative [Ricinus communis]
Length = 586
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RIN 60
+SF+R NLKYE++ K K LK+V L+K ++ Q GIVYCL++ EC V+ L + +I
Sbjct: 394 TSFDRPNLKYEVIGKTKESLKQVGQLLKDRFKNQCGIVYCLSKNECIEVSNFLNDKCKIK 453
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGLA + R EVQ KW + H+
Sbjct: 454 TVYYHAGLATRQRVEVQRKWHMGEAHI 480
>gi|313669255|ref|YP_004049539.1| ATP-dependent DNA helicase [Neisseria lactamica 020-06]
gi|313006717|emb|CBN88187.1| ATP-dependent DNA helicase [Neisseria lactamica 020-06]
Length = 766
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL +R E Q ++
Sbjct: 257 AIPYHAGLGMDVREENQRRF 276
>gi|387592527|gb|EIJ87551.1| hypothetical protein NEQG_02098 [Nematocida parisii ERTm3]
gi|387595153|gb|EIJ92778.1| hypothetical protein NEPG_02177 [Nematocida parisii ERTm1]
Length = 861
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER- 58
F SFNR NLKY ++PK KN + E++S I+ Y SGI+YCL++++C+ +A L ++
Sbjct: 527 FTQSFNRPNLKYRVIPKTKNQIAEIVSFIETHYPEDSGIIYCLSKRDCEWLAETLQKDHG 586
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL+ K R E +W S+ + V
Sbjct: 587 IRAGYYHAGLSTKERTERAREWDSSHIRV 615
>gi|241760708|ref|ZP_04758800.1| ATP-dependent DNA helicase RecQ [Neisseria flavescens SK114]
gi|241318889|gb|EER55415.1| ATP-dependent DNA helicase RecQ [Neisseria flavescens SK114]
Length = 769
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + VA L + +
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLCENGLE 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|184201977|ref|YP_001856184.1| ATP-dependent DNA helicase RecQ [Kocuria rhizophila DC2201]
gi|183582207|dbj|BAG30678.1| ATP-dependent DNA helicase RecQ [Kocuria rhizophila DC2201]
Length = 615
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 59/81 (72%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+S+F+R N++Y I PK +++ LI++++ G++GIVYC++RK +S AA L+ ++
Sbjct: 201 FVSNFDRPNIQYRIEPKDRAKDQLLRLIQSEHPGEAGIVYCMSRKSVESTAAWLSARGVD 260
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R+E Q++++
Sbjct: 261 AMPYHAGLDAAVRHETQVRFL 281
>gi|238487580|ref|XP_002375028.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
gi|317143477|ref|XP_001819502.2| recQ family helicase MusN [Aspergillus oryzae RIB40]
gi|220699907|gb|EED56246.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
Length = 1524
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK +L + IK+ Y +SGIVYCL+R C VA +L +
Sbjct: 895 FTQSFNRPNLTYEVRQKKKGNELLASIADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDD 954
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ R EVQ +W + + HV
Sbjct: 955 YRIKAEHYHAGMKPDERAEVQQRWQAGRSHV 985
>gi|411116551|ref|ZP_11389038.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
gi|410712654|gb|EKQ70155.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
Length = 741
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+S+FNR NL YE+ PK K +E++ LI+ + +G SGI+YCL+RK D + L ++ I+
Sbjct: 207 VSTFNRPNLYYEVRPKHKQSYRELLQLIRQQ-AGASGIIYCLSRKRVDELTTKLQRDGIS 265
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ ++LR+E Q ++I + V V
Sbjct: 266 ALPYHAGMDNQLRSENQSRFIRDNVQV 292
>gi|333376203|ref|ZP_08467993.1| ATP-dependent helicase RecQ [Kingella kingae ATCC 23330]
gi|332968612|gb|EGK07666.1| ATP-dependent helicase RecQ [Kingella kingae ATCC 23330]
Length = 819
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ IK + GQSGIVYCL+RK + VAA L + +N
Sbjct: 219 FVSSFDRPNIYYQVIEKNNGKKQLLDFIKRQMHGQSGIVYCLSRKNVEDVAAFLCENGLN 278
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAG++ + R + Q ++
Sbjct: 279 AVPYHAGMSLENRQQNQHRF 298
>gi|381402006|ref|ZP_09926893.1| ATP-dependent DNA helicase [Kingella kingae PYKK081]
gi|380832983|gb|EIC12864.1| ATP-dependent DNA helicase [Kingella kingae PYKK081]
Length = 796
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ IK + GQSGIVYCL+RK + VAA L + +N
Sbjct: 196 FVSSFDRPNIYYQVIEKNNGKKQLLDFIKRQMHGQSGIVYCLSRKNVEDVAAFLCENGLN 255
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAG++ + R + Q ++
Sbjct: 256 AVPYHAGMSLENRQQNQHRF 275
>gi|384213982|ref|YP_005605145.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 6]
gi|354952878|dbj|BAL05557.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 6]
Length = 621
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 57/82 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++YEI+ K+N + ++ I+ +++G +G+VYCL+R + VAAAL I
Sbjct: 209 FVSSFDRPNIRYEIVDKRNAVSQLKEFIRERHTGDAGVVYCLSRNRVEEVAAALDDAGIA 268
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R+ Q ++++
Sbjct: 269 ALPYHAGLDSSIRSRNQDRFLN 290
>gi|391864070|gb|EIT73368.1| ATP-dependent DNA helicase [Aspergillus oryzae 3.042]
Length = 1174
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK +L + IK+ Y +SGIVYCL+R C VA +L +
Sbjct: 545 FTQSFNRPNLTYEVRQKKKGNELLASIADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDD 604
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ R EVQ +W + + HV
Sbjct: 605 YRIKAEHYHAGMKPDERAEVQQRWQAGRSHV 635
>gi|350631262|gb|EHA19633.1| RecQ family helicase MusN [Aspergillus niger ATCC 1015]
Length = 1452
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK +L + IK Y+ +SGIVYCL+RK C+ VA+ L +
Sbjct: 824 FSQSFNRPNLTYEVRIKKKGTELLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDD 883
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ R ++Q W + + HV
Sbjct: 884 YRIKAEHYHAGMDSAERAKIQQDWQAGRTHV 914
>gi|317032832|ref|XP_001394458.2| recQ family helicase MusN [Aspergillus niger CBS 513.88]
Length = 1460
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK +L + IK Y+ +SGIVYCL+RK C+ VA+ L +
Sbjct: 818 FSQSFNRPNLTYEVRIKKKGTELLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDD 877
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ R ++Q W + + HV
Sbjct: 878 YRIKAEHYHAGMDSAERAKIQQDWQAGRTHV 908
>gi|134079141|emb|CAK45953.1| unnamed protein product [Aspergillus niger]
Length = 1548
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK +L + IK Y+ +SGIVYCL+RK C+ VA+ L +
Sbjct: 906 FSQSFNRPNLTYEVRIKKKGTELLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDD 965
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ R ++Q W + + HV
Sbjct: 966 YRIKAEHYHAGMDSAERAKIQQDWQAGRTHV 996
>gi|408675008|ref|YP_006874756.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387856632|gb|AFK04729.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 715
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R NL +LP +N LK VI AK + QSGI+YCL+RK + VA L + I
Sbjct: 194 FISSFDRPNLNLRVLPGRNRLK-VIHEFIAKRTNQSGIIYCLSRKNTEDVAEGLRKLGIR 252
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL + R EVQ +I +++ V
Sbjct: 253 AMHYHAGLDAQTRAEVQDAYIKDEIQV 279
>gi|421541617|ref|ZP_15987734.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM255]
gi|402319986|gb|EJU55490.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis NM255]
Length = 766
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + VA L + +
Sbjct: 197 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLCENGLE 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|416159361|ref|ZP_11605824.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis N1568]
gi|433472654|ref|ZP_20430024.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 97021]
gi|433481078|ref|ZP_20438350.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2006087]
gi|433483200|ref|ZP_20440438.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2002038]
gi|433485301|ref|ZP_20442507.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 97014]
gi|325128984|gb|EGC51835.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis N1568]
gi|432212538|gb|ELK68476.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 97021]
gi|432219431|gb|ELK75278.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2006087]
gi|432223646|gb|ELK79426.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 2002038]
gi|432224761|gb|ELK80524.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 97014]
Length = 767
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + +
Sbjct: 198 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLCENGLE 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 258 AIPYHAGLSMDVREENQRRF 277
>gi|167386794|ref|XP_001737905.1| ATP-dependent helicase SGS1 [Entamoeba dispar SAW760]
gi|165899114|gb|EDR25795.1| ATP-dependent helicase SGS1, putative [Entamoeba dispar SAW760]
Length = 1162
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL Y + PK K V+ E+ +IK KY GQSGI+YCL++K VA L + I
Sbjct: 633 FSQSFNRKNLTYCVRPKTKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDVAQELNKRGI 692
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
+ YHAG+ K R +VQ +W G + V+ C ++A +
Sbjct: 693 KSKYYHAGMDTKERTKVQKEWCD-----GEFNVI---CATIAFGMG 730
>gi|428302021|ref|YP_007140327.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
gi|428238565|gb|AFZ04355.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
Length = 724
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK K V EV+ LI+ S S I+YCLTRK+ D + L ++I+
Sbjct: 203 IASFNRQNLYYEVRPKTKTVYAEVLELIRE--SEASTIIYCLTRKQVDELTFKLQHDKIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A++YHAGL+D+ R Q ++I + V V TV
Sbjct: 261 ALAYHAGLSDEERTNNQTRFIRDDVRVMVATV 292
>gi|428184545|gb|EKX53400.1| hypothetical protein GUITHDRAFT_64555, partial [Guillardia theta
CCMP2712]
Length = 513
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F S NR NL Y + K K+VL ++S+IK +SG+SGIVYCL+R++ + VA LA+
Sbjct: 193 FRGSVNRPNLVYRVEEKPYASKDVLTMILSVIKQNFSGKSGIVYCLSRRDAEDVAKFLAE 252
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A+ YHA L+D+ R V +W VH+
Sbjct: 253 NGLRALPYHADLSDEYRTRVHQQWTKGIVHI 283
>gi|294668123|ref|ZP_06733230.1| ATP-dependent DNA helicase RecQ [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309831|gb|EFE51074.1| ATP-dependent DNA helicase RecQ [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 420
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ D AA L + ++
Sbjct: 160 FVASFDRPNIYYQVVEKNNGKKQLLQFIQGQMAGQSGIVYCLSRKKVDDTAAFLCENGLD 219
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ + R Q ++
Sbjct: 220 AVAYHAGMTMQQREAAQYRFT 240
>gi|254384325|ref|ZP_04999668.1| ATP-dependent DNA helicase [Streptomyces sp. Mg1]
gi|194343213|gb|EDX24179.1| ATP-dependent DNA helicase [Streptomyces sp. Mg1]
Length = 653
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 59/84 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I K N LK+++ LI+ ++ G +G+VYCL+R + AA LA++ I+
Sbjct: 199 FVASFDRPNIQYRIAGKNNPLKQLLELIRTEHDGDAGVVYCLSRSSVEKTAAFLAEQGID 258
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A++YHAG+ + R Q +++ ++
Sbjct: 259 AVAYHAGMDARTRAANQARFLRDE 282
>gi|126668479|ref|ZP_01739435.1| ATP-dependent DNA helicase RecQ [Marinobacter sp. ELB17]
gi|126627096|gb|EAZ97737.1| ATP-dependent DNA helicase RecQ, partial [Marinobacter sp. ELB17]
Length = 367
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I PK N K+++ IK ++ G GIVYCL+RK+ D+ A L + N
Sbjct: 212 FISGFDRPNIQYRITPKINANKQLLDFIKTEHEGDCGIVYCLSRKKVDATAKLLQSKGYN 271
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGLA R Q +++
Sbjct: 272 ALPYHAGLAADERASNQNRFL 292
>gi|254429530|ref|ZP_05043237.1| ATP-dependent DNA helicase RecQ [Alcanivorax sp. DG881]
gi|196195699|gb|EDX90658.1| ATP-dependent DNA helicase RecQ [Alcanivorax sp. DG881]
Length = 713
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 58/81 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I K +++ L++A+++G++GIVYCL+R + D VA L Q+ IN
Sbjct: 196 FVSSFDRPNIQYRIERKDGARNQLLRLLRAEHAGEAGIVYCLSRNKVDRVAEWLCQQGIN 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R + Q +++
Sbjct: 256 ALPYHAGLSGPVREKHQQRFL 276
>gi|332667951|ref|YP_004450739.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332336765|gb|AEE53866.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 713
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI+SF+R NL E+ P + L ++ ++ K+ Q+GI+YCL+RK + VAA LAQ+ +
Sbjct: 197 FIASFDRPNLSLEVRPGQQRLGQIQEFVQ-KHPKQAGIIYCLSRKTAEDVAAKLAQQGLK 255
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A +YHAGL+ R+++Q +I++ +H+ TV
Sbjct: 256 AEAYHAGLSPDRRSKIQDNFINDNIHIICATV 287
>gi|398390493|ref|XP_003848707.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
gi|339468582|gb|EGP83683.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
Length = 1455
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQ 56
F SSFNR NL YE+ K K ++ + +LIK + Q+GI+YC +RK+C+ +A AL Q
Sbjct: 786 FTSSFNRRNLYYEVRKKAKGKGDIESIANLIKEDHHKQTGIIYCFSRKDCEGMAEALRKQ 845
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + +++VQ KW + HV
Sbjct: 846 HSIKAHHYHAGLKSEEKSQVQKKWQAGTYHV 876
>gi|300777720|ref|ZP_07087578.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
gi|300503230|gb|EFK34370.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
Length = 734
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SFNR NL YE+ PK NV KE++ I ++ G+SGIVYCL+R++ + A L IN
Sbjct: 202 FKESFNRPNLYYEVRPKVNVDKEIVKFIN-QHKGKSGIVYCLSRRKVEEFAQLLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K+R Q K++ +V V
Sbjct: 261 ALPYHAGLDQKVRVANQDKFLMEEVDV 287
>gi|225077493|ref|ZP_03720692.1| hypothetical protein NEIFLAOT_02556 [Neisseria flavescens
NRL30031/H210]
gi|224951178|gb|EEG32387.1| hypothetical protein NEIFLAOT_02556 [Neisseria flavescens
NRL30031/H210]
Length = 769
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + VA L + +
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLCENGLE 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|27375353|ref|NP_766882.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 110]
gi|27348489|dbj|BAC45507.1| ATP-dependent DNA helicase [Bradyrhizobium japonicum USDA 110]
Length = 670
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 57/82 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++YEI+ K+N + ++ I+ +++G +G+VYCL+R + VAAAL I
Sbjct: 258 FVSSFDRPNIRYEIVDKRNAVSQLKEFIRERHAGDAGVVYCLSRNRVEEVAAALDDAGIA 317
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R+ Q ++++
Sbjct: 318 ALPYHAGLDSSVRSRNQDRFLN 339
>gi|378754679|gb|EHY64709.1| hypothetical protein NERG_02328, partial [Nematocida sp. 1 ERTm2]
Length = 517
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER- 58
F SFNR NLKY ++PK KNV+ +++S I+ + SGI+YCL++++C+ +A L +E
Sbjct: 185 FSQSFNRPNLKYLVVPKNKNVISDMVSFIETYFPADSGIIYCLSKRDCEWLAEVLHKEHN 244
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL+ K R E W S+K+ V
Sbjct: 245 IPAGYYHAGLSTKERTERARSWDSSKIRV 273
>gi|288800855|ref|ZP_06406312.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332316|gb|EFC70797.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
Length = 725
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YE+ PK N V KE+I IK K G+SGIVYCL+RK+ + ++A L I
Sbjct: 201 FKSSFNRANLYYEVRPKTNDVDKELIKFIK-KNEGKSGIVYCLSRKKVEELSAILQANNI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL + R++ Q ++ ++ V
Sbjct: 260 KAAAYHAGLDNIPRSQTQDDFLMERIDV 287
>gi|399024201|ref|ZP_10726247.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
gi|398081075|gb|EJL71860.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
Length = 734
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SFNR NL YE+ PK NV KE++ I ++ G+SGIVYCL+R++ + A L IN
Sbjct: 202 FKESFNRPNLYYEVRPKVNVDKEIVKFIN-QHKGKSGIVYCLSRRKVEEFAQLLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K+R Q K++ +V V
Sbjct: 261 ALPYHAGLDQKVRVANQDKFLMEEVDV 287
>gi|423316589|ref|ZP_17294494.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
gi|405583639|gb|EKB57579.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
Length = 733
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ SSFNR NL YE+ PK NV KE++ I + G+SGI+YCL+RK+ + A L IN
Sbjct: 202 YKSSFNRPNLYYEVRPKINVDKEIVKFINQR-KGKSGIIYCLSRKKVEEFAQLLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL K R Q K++ +ECD + A +A
Sbjct: 261 ALPYHAGLDQKTRVANQDKFL------------MEECDVIVATIA 293
>gi|421539471|ref|ZP_15985632.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 93004]
gi|402321456|gb|EJU56930.1| ATP-dependent DNA helicase RecQ [Neisseria meningitidis 93004]
Length = 766
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + VA L + +
Sbjct: 197 FVSSFDRPNIYYQVIEKNNGKKQLLDFIRKQMHGQSGIVYCLSRKKVEDVAQFLCENGLE 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ +R E Q ++
Sbjct: 257 AIPYHAGLSMDVREENQRRF 276
>gi|406674061|ref|ZP_11081273.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
gi|405584835|gb|EKB58711.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
Length = 733
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ SSFNR NL YE+ PK NV KE++ I + G+SGI+YCL+RK+ + A L IN
Sbjct: 202 YKSSFNRPNLYYEVRPKINVDKEIVKFINQR-KGKSGIIYCLSRKKVEEFAQLLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL K R Q K++ +ECD + A +A
Sbjct: 261 ALPYHAGLDQKTRVANQDKFL------------MEECDVIVATIA 293
>gi|443476000|ref|ZP_21065927.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
gi|443019101|gb|ELS33248.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
Length = 769
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 2 ISSFNRANLKYEILPKKNVLKEVISLIKA-KYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SFNR NL YE++PK+ + ++L++ K SGIVYCL+RK + +A L ++ I
Sbjct: 230 VASFNRDNLYYEVVPKQGTEQSYVNLLQQIKRMQGSGIVYCLSRKRVNEIAERLREDGIA 289
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
AI YHAGL+ K R E Q +WI + V V
Sbjct: 290 AIPYHAGLSAKEREENQTRWIRDDVQV 316
>gi|432332157|ref|YP_007250300.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
gi|432138866|gb|AGB03793.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
Length = 611
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQ----SGIVYCLTRKECDSVAAALAQ 56
F SFNR NL+Y ++PKKN L + A Y GQ SGIVYCL+R E ++VA L Q
Sbjct: 195 FTGSFNRKNLRYRVVPKKNPL-----VFLADYLGQHREESGIVYCLSRSETETVAGDLQQ 249
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+A +YHAGL+ + R VQ +I ++V V
Sbjct: 250 RGFSAAAYHAGLSRQERERVQESFIRDRVQV 280
>gi|83767361|dbj|BAE57500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 809
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK +L + IK+ Y +SGIVYCL+R C VA +L +
Sbjct: 448 FTQSFNRPNLTYEVRQKKKGNELLASIADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDD 507
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
RI A YHAG+ R EVQ +W + + HV
Sbjct: 508 YRIKAEHYHAGMKPDERAEVQQRWQAGRSHV 538
>gi|168029873|ref|XP_001767449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681345|gb|EDQ67773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 655
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSG-QSGIVYCLTRKECDSVAAALA 55
F+S+ NR NL YE+ KK + ++ S I KYS +SGIVYC +RKEC+ VAA L
Sbjct: 270 FVSTVNRPNLFYEVREKKANGSAAIDDIASFILDKYSKKESGIVYCFSRKECEQVAAELR 329
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ I+A YHA + + R+ V M+W +NK+ V TV
Sbjct: 330 KRGISAAHYHADMKPETRSSVHMRWSTNKLQVIVGTV 366
>gi|212529002|ref|XP_002144658.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
gi|210074056|gb|EEA28143.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
Length = 1573
Score = 79.0 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 4 SFNRANLKYEILPKK----NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ-ER 58
SFNR NL Y++LPKK +++ ++ +I+ Y ++GIVYCL+RK+C+ VA L+Q
Sbjct: 900 SFNRPNLTYDVLPKKGSAPDIISQIADIIETSYRRKAGIVYCLSRKDCEKVAQELSQGYN 959
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ + R VQ W + + V
Sbjct: 960 IKATHYHAGMPSEERTSVQRDWQAGRYDV 988
>gi|121592519|ref|YP_984415.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. JS42]
gi|120604599|gb|ABM40339.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. JS42]
Length = 623
Score = 79.0 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I+ KK+ +++ I+ ++SG++G+VYC +RK + +AA L IN
Sbjct: 203 FISSFDRPNIRYTIVEKKDATTQLLRFIEREHSGEAGVVYCQSRKRVEELAATLQDAGIN 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL K+R Q +++
Sbjct: 263 ALPYHAGLDTKVRQNHQDRFL 283
>gi|410670594|ref|YP_006922965.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
gi|409169722|gb|AFV23597.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
Length = 705
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+I+SFNR+NL YEI PKK +++ ++ + G+ GI+YC +RK D+V A L + N
Sbjct: 192 YIASFNRSNLLYEIRPKKETYDQILQYLR-RNKGKGGIIYCQSRKNVDTVTAKLRKAGFN 250
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL+D R Q +I +K +
Sbjct: 251 ALPYHAGLSDTQRGRNQEAFIKDKADI 277
>gi|334121014|ref|ZP_08495090.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
gi|333455733|gb|EGK84376.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
Length = 731
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SFNR NL YE+ PK K+ EV+ +IK K G SGI+YCL+RK+ D VA L Q I
Sbjct: 211 VASFNRPNLYYEVRPKTKHSFAEVLQIIKKK--GGSGIIYCLSRKKVDEVAYKLQQSGIQ 268
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ D R Q ++I + V V
Sbjct: 269 ALPYHAGMNDVDRATNQTRFIRDDVQV 295
>gi|340383049|ref|XP_003390030.1| PREDICTED: Bloom syndrome protein homolog [Amphimedon
queenslandica]
Length = 1085
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NL Y + KK V +++I+LI + G++GIVYC +R++C++V + L
Sbjct: 640 FTQSFNRTNLAYSVRHKKPKKVTEDIITLINNNFKGETGIVYCFSRRDCETVCSDLNSAG 699
Query: 59 INAISYHAGLADKLRNEVQMKWISN 83
I ++ YHAGL D R+ +Q W+ +
Sbjct: 700 IASVIYHAGLPDHQRSHIQETWLRD 724
>gi|308462738|ref|XP_003093650.1| CRE-HIM-6 protein [Caenorhabditis remanei]
gi|308249588|gb|EFO93540.1| CRE-HIM-6 protein [Caenorhabditis remanei]
Length = 1039
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/107 (42%), Positives = 59/107 (55%), Gaps = 20/107 (18%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTR--------------- 44
FISSF R NLKY+++PK L V+ +K Y G+SGIVYCL+R
Sbjct: 469 FISSFVRDNLKYDLIPKAAKSLINVVEKMKQLYPGKSGIVYCLSRYKILQKKRQKIYLTL 528
Query: 45 ----KECDSVAAALAQERINAISYHAGLADKLRNEVQMKWISNKVHV 87
KEC++V L + ++A YHAGL D LR VQ W++NK V
Sbjct: 529 AFFRKECETVQMMLTKAGLSAEVYHAGLNDGLRVSVQKGWLANKFDV 575
>gi|418528117|ref|ZP_13094067.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni ATCC 11996]
gi|371454493|gb|EHN67495.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni ATCC 11996]
Length = 636
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y+I KK+V +++ I+ ++ G++G+VYC +RK + +A L Q IN
Sbjct: 203 FISSFDRPNIRYKIAEKKDVSNQLLRFIEREHEGEAGVVYCQSRKRVEELAQTLVQNGIN 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 263 ALPYHAGLPQEMRQNHQDRFL 283
>gi|421596626|ref|ZP_16040405.1| ATP-dependent DNA helicase RecQ, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404271264|gb|EJZ35165.1| ATP-dependent DNA helicase RecQ, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 331
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 56/82 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++YEI+ K+N + ++ I+ ++ G +G+VYCL+R + VAAAL I
Sbjct: 209 FVSSFDRPNIRYEIVDKRNAVSQLKEFIRERHMGDAGVVYCLSRNRVEEVAAALQDAGIA 268
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R+ Q ++++
Sbjct: 269 ALPYHAGLDGSVRSRNQDRFLN 290
>gi|313205605|ref|YP_004044782.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383484930|ref|YP_005393842.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312444921|gb|ADQ81276.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459615|gb|AFD55299.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 734
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SFNR NL YE+ PK +V KE++ I K G+SGIVYCL+RK+ + A L IN
Sbjct: 202 FKESFNRPNLFYEVRPKVDVEKEIVKFIN-KNKGKSGIVYCLSRKKVEEFAQTLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL K R Q K++ +ECD + A +A
Sbjct: 261 ALPYHAGLDQKTRVANQDKFL------------MEECDVIVATIA 293
>gi|328770877|gb|EGF80918.1| hypothetical protein BATDEDRAFT_10941 [Batrachochytrium
dendrobatidis JAM81]
Length = 573
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR+NL+Y++ K K + ++ + IK Y SGI+YC +RK C++ +A L + I
Sbjct: 234 FQQSFNRSNLRYDVRKKDKGLDADITAFIKTFYPNASGIIYCSSRKACEATSAKLCKLGI 293
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL + R+ +Q W +N VH+
Sbjct: 294 KAAFYHAGLDKEDRSRIQTAWATNSVHI 321
>gi|386320424|ref|YP_006016586.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|416111385|ref|ZP_11592598.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|442315223|ref|YP_007356526.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
gi|315022665|gb|EFT35690.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|325334967|gb|ADZ11241.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|441484146|gb|AGC40832.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
Length = 734
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SFNR NL YE+ PK +V KE++ I K G+SGIVYCL+RK+ + A L IN
Sbjct: 202 FKESFNRPNLFYEVRPKVDVEKEIVKFIN-KNKGKSGIVYCLSRKKVEEFAQTLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL K R Q K++ +ECD + A +A
Sbjct: 261 ALPYHAGLDQKTRVANQDKFL------------MEECDVIVATIA 293
>gi|399545042|ref|YP_006558350.1| ATP-dependent DNA helicase recQ [Marinobacter sp. BSs20148]
gi|399160374|gb|AFP30937.1| ATP-dependent DNA helicase recQ [Marinobacter sp. BSs20148]
Length = 686
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I PK N K+++ IK ++ G GIVYCL+RK+ D+ A L + N
Sbjct: 279 FISGFDRPNIQYRITPKINANKQLLDFIKTEHEGDCGIVYCLSRKKVDATAKLLQSKGYN 338
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGLA R Q +++
Sbjct: 339 ALPYHAGLAADERASNQNRFL 359
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
SFNR NL YE+LPK K V ++ S I + QSGIVYC ++ C+ V+ AL Q + A
Sbjct: 423 SFNRNNLFYEVLPKDKKIVTSQIASYILNDFKSQSGIVYCHSKDTCEKVSMALTQMGVKA 482
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ +K R+ VQ W SN+ V
Sbjct: 483 SFYHAGMTNKQRDHVQKLWQSNRYQV 508
>gi|255719436|ref|XP_002555998.1| KLTH0H02706p [Lachancea thermotolerans]
gi|238941964|emb|CAR30136.1| KLTH0H02706p [Lachancea thermotolerans CBS 6340]
Length = 1403
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+L K KNV+ ++ + +K ++ Q+GI+YC ++ C+ A+ L + IN+
Sbjct: 827 SFNRTNLYYEVLKKSKNVVFDICNAVKTRFKNQTGIIYCHSKNSCEQTASLLQRNGINSA 886
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R EVQ W +N++ +
Sbjct: 887 YYHAGMEPDERLEVQQAWQANRIRI 911
>gi|407452782|ref|YP_006724507.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
gi|403313766|gb|AFR36607.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
Length = 734
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SFNR NL YE+ PK +V KE++ I K G+SGIVYCL+RK+ + A L IN
Sbjct: 202 FKESFNRPNLFYEVRPKVDVEKEIVKFIN-KNKGKSGIVYCLSRKKVEEFAQTLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL K R Q K++ +ECD + A +A
Sbjct: 261 ALPYHAGLDQKTRVANQDKFL------------MEECDVIVATIA 293
>gi|345011269|ref|YP_004813623.1| ATP-dependent DNA helicase RecQ [Streptomyces violaceusniger Tu
4113]
gi|344037618|gb|AEM83343.1| ATP-dependent DNA helicase RecQ [Streptomyces violaceusniger Tu
4113]
Length = 623
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK K+++ L++A+++G +GIVYCL+R + A L + I+
Sbjct: 212 FVASFDRPNIQYRIAPKNEPKKQLLELLRAEHAGDAGIVYCLSRSSVEKTAEFLVAQGID 271
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R E Q +++
Sbjct: 272 AVPYHAGLDARMRAEHQARFL 292
>gi|284030844|ref|YP_003380775.1| ATP-dependent DNA helicase RecQ [Kribbella flavida DSM 17836]
gi|283810137|gb|ADB31976.1| ATP-dependent DNA helicase RecQ [Kribbella flavida DSM 17836]
Length = 612
Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK N ++++ L++ +++G +GIVYCL+R + AA L Q I
Sbjct: 203 FVASFDRPNIQYRIVPKDNPQRQLLDLLRTEHAGDAGIVYCLSRNGVEKTAAFLTQNGIE 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 263 AVPYHAGLDSRTRARNQSRFL 283
>gi|299533374|ref|ZP_07046756.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni S44]
gi|298718580|gb|EFI59555.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni S44]
Length = 636
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y+I KK+V +++ I+ ++ G++G+VYC +RK + +A L Q IN
Sbjct: 203 FISSFDRPNIRYKIAEKKDVSNQLLRFIEREHEGEAGVVYCQSRKRVEELAQTLVQNGIN 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 263 ALPYHAGLPQEMRQNHQDRFL 283
>gi|345876298|ref|ZP_08828072.1| ATP-dependent DNA helicase RecQ [Neisseria weaveri LMG 5135]
gi|343966903|gb|EGV35155.1| ATP-dependent DNA helicase RecQ [Neisseria weaveri LMG 5135]
Length = 600
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y+++ K N K+++ IK + +GQSGIVYCL+RK+ + VAA L + ++
Sbjct: 197 FVASFDRPNIYYQVIEKNNGKKQLLDFIKKQAAGQSGIVYCLSRKKVEDVAAFLCENGLD 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL +R Q ++
Sbjct: 257 AIPYHAGLEMDVREANQKRF 276
>gi|324516572|gb|ADY46570.1| ATP-dependent DNA helicase Q1, partial [Ascaris suum]
Length = 430
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR NL YE+ K + L E++SLI ++ GQSGI+YC +RKEC+ + AL
Sbjct: 269 FRAGFNRPNLYYEVRNKPSSSEQFLDELVSLINDRFDGQSGIIYCFSRKECEDLTHALRS 328
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A YHA L R+ +WI +V V
Sbjct: 329 RKIKAAHYHAYLESDKRSRTHERWIGGEVDV 359
>gi|187479254|ref|YP_787279.1| ATP-dependent DNA helicase [Bordetella avium 197N]
gi|115423841|emb|CAJ50392.1| ATP-dependent DNA helicase [Bordetella avium 197N]
Length = 606
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K +V ++++ LI+ ++ G SG+VYCL+R + A L + IN
Sbjct: 197 FVASFDRPNIRYRIVEKNDVRRQLLDLIRTEHEGDSGVVYCLSRARVEETAEFLCNQGIN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +LR Q +++
Sbjct: 257 ALPYHAGLSAQLRASNQSRFL 277
>gi|417957605|ref|ZP_12600525.1| ATP-dependent DNA helicase RecQ [Neisseria weaveri ATCC 51223]
gi|343967938|gb|EGV36176.1| ATP-dependent DNA helicase RecQ [Neisseria weaveri ATCC 51223]
Length = 600
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y+++ K N K+++ IK + +GQSGIVYCL+RK+ + VAA L + ++
Sbjct: 197 FVASFDRPNIYYQVIEKNNGKKQLLDFIKKQAAGQSGIVYCLSRKKVEDVAAFLCENGLD 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL +R Q ++
Sbjct: 257 AIPYHAGLEMDVREANQKRF 276
>gi|298370468|ref|ZP_06981784.1| ATP-dependent DNA helicase RecQ [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281928|gb|EFI23417.1| ATP-dependent DNA helicase RecQ [Neisseria sp. oral taxon 014 str.
F0314]
Length = 622
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + V L + ++
Sbjct: 197 YISSFDRPNIYYQVIEKNNGKKQLLDFIQKQMGGQSGIVYCLSRKKVEDVTGFLCEHGLD 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ ++R Q K+
Sbjct: 257 AIPYHAGLSMEMRETNQRKF 276
>gi|349610557|ref|ZP_08889898.1| hypothetical protein HMPREF1028_01873 [Neisseria sp. GT4A_CT1]
gi|348609732|gb|EGY59459.1| hypothetical protein HMPREF1028_01873 [Neisseria sp. GT4A_CT1]
Length = 797
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + +A L + ++
Sbjct: 224 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKEMEGQSGIVYCLSRKKVEDIAQFLCENGLD 283
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ ++R Q ++
Sbjct: 284 AIPYHAGLSMEVREANQRRF 303
>gi|288576074|ref|ZP_05978143.2| ATP-dependent DNA helicase RecQ [Neisseria mucosa ATCC 25996]
gi|288566348|gb|EFC87908.1| ATP-dependent DNA helicase RecQ [Neisseria mucosa ATCC 25996]
Length = 797
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + +A L + ++
Sbjct: 224 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKEMEGQSGIVYCLSRKKVEDIAQFLCENGLD 283
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ ++R Q ++
Sbjct: 284 AIPYHAGLSMEVREANQRRF 303
>gi|419798969|ref|ZP_14324351.1| ATP-dependent DNA helicase RecQ [Neisseria sicca VK64]
gi|385692992|gb|EIG23653.1| ATP-dependent DNA helicase RecQ [Neisseria sicca VK64]
Length = 833
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQSGIVYCL+RK+ + +A L + ++
Sbjct: 260 FISSFDRPNIYYQVIEKNNGKKQLLDFIRKEMEGQSGIVYCLSRKKVEDIAQFLCENGLD 319
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ ++R Q ++
Sbjct: 320 AIPYHAGLSMEVREANQRRF 339
>gi|50557416|ref|XP_506116.1| YALI0F31977p [Yarrowia lipolytica]
gi|49651986|emb|CAG78930.1| YALI0F31977p [Yarrowia lipolytica CLIB122]
Length = 1300
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL YE+ L KN +E+ +++ +Y GQ+GI+YC ++K C++ + L + I
Sbjct: 693 FKQSFNRPNLYYEVRLKTKNFQQEITDMLRGRYRGQTGIIYCHSKKLCETTSEFLKEAGI 752
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ + R VQ W S K+ V
Sbjct: 753 KADFYHAGMETEQRTYVQGNWQSGKIQV 780
>gi|163855205|ref|YP_001629503.1| DNA helicase [Bordetella petrii DSM 12804]
gi|163258933|emb|CAP41232.1| DNA helicase [Bordetella petrii]
Length = 604
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V ++++ LI+A++ G SG+VYCL+R + A L Q IN
Sbjct: 197 FVASFDRPNIRYRIVEKNEVRRQLLDLIRAEHEGDSGVVYCLSRARVEETADFLCQNGIN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R Q +++
Sbjct: 257 ALPYHAGLSAAVRARNQSRFL 277
>gi|299141494|ref|ZP_07034630.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
gi|298576830|gb|EFI48700.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
Length = 725
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YE+ PK N V K++I I+ ++ G+SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRANLYYEVRPKTNDVDKQIIKFIR-QHEGKSGIIYCLSRKKVEELAEVLKANEI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 260 KAAPYHAGLDSATRSQTQDDFLMERIDV 287
>gi|386774753|ref|ZP_10097131.1| ATP-dependent DNA helicase RecQ [Brachybacterium paraconglomeratum
LC44]
Length = 629
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I PK + ++++ LI A++ G SGIVYCL+RK ++ A LA I
Sbjct: 215 FVSSFDRPNIQYRIEPKASPREQLLRLITAEHEGDSGIVYCLSRKSVETTAQWLADRGIP 274
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R + Q +++
Sbjct: 275 ALPYHAGLPPEVRQDHQERFL 295
>gi|260783443|ref|XP_002586784.1| hypothetical protein BRAFLDRAFT_102942 [Branchiostoma floridae]
gi|229271910|gb|EEN42795.1| hypothetical protein BRAFLDRAFT_102942 [Branchiostoma floridae]
Length = 849
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+L K +NV+++++ I +++ GQSGI+Y +RKE ++VA L +
Sbjct: 362 FRASFNRHNLYYEVLRKPSSHENVMEKLVQTINSRFQGQSGIIYVFSRKEAETVAGDLLK 421
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHA L R+ V KW+ N + V
Sbjct: 422 RGVRAGCYHADLDAAYRSRVHRKWLENTIQV 452
>gi|120554360|ref|YP_958711.1| ATP-dependent DNA helicase RecQ [Marinobacter aquaeolei VT8]
gi|120324209|gb|ABM18524.1| ATP-dependent DNA helicase RecQ [Marinobacter aquaeolei VT8]
Length = 625
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I PK N K+++ IKA++ G GIVYCL+R + D+ A L+ +
Sbjct: 213 FISGFDRPNIQYRITPKTNANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAQLLSSKGYT 272
Query: 61 AISYHAGLA--DKLRNE 75
A+ YHAGL+ D+ RN+
Sbjct: 273 ALPYHAGLSAEDRARNQ 289
>gi|398835929|ref|ZP_10593279.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. YR522]
gi|398214251|gb|EJN00833.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. YR522]
Length = 618
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 58/81 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ IK++++ +GIVYCL+RK+ D A L E +N
Sbjct: 208 FVSSFDRPNIRYQIVEKGNGRKQLLDFIKSEHAEDAGIVYCLSRKKVDETAEFLRSEGLN 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ + R+ Q +++
Sbjct: 268 ALAYHAGMDAQARSTNQSRFL 288
>gi|264676290|ref|YP_003276196.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni CNB-2]
gi|262206802|gb|ACY30900.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni CNB-2]
Length = 636
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y+I KK+V +++ I+ ++ G++G++YC +RK + +A L Q IN
Sbjct: 203 FISSFDRPNIRYKIAEKKDVSNQLLRFIEREHEGEAGVIYCQSRKRVEELAQTLVQNGIN 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 263 ALPYHAGLPQEMRQNHQDRFL 283
>gi|296089753|emb|CBI39572.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQERIN 60
+SF+R+NLKYE++ K K LK++ L+K ++ GIVYCL++ EC V+ L + +I
Sbjct: 380 TSFDRSNLKYEVIGKTKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIK 439
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL+ + R +VQ KW + KVH+
Sbjct: 440 TVYYHAGLSARQRIDVQKKWHTGKVHI 466
>gi|225450636|ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
vinifera]
Length = 602
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQERIN 60
+SF+R+NLKYE++ K K LK++ L+K ++ GIVYCL++ EC V+ L + +I
Sbjct: 391 TSFDRSNLKYEVIGKTKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIK 450
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL+ + R +VQ KW + KVH+
Sbjct: 451 TVYYHAGLSARQRIDVQKKWHTGKVHI 477
>gi|281425296|ref|ZP_06256209.1| hypothetical protein HMPREF0971_02268 [Prevotella oris F0302]
gi|281400589|gb|EFB31420.1| ATP-dependent DNA helicase RecQ [Prevotella oris F0302]
Length = 725
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YE+ PK N V K++I I+ ++ G+SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRANLYYEVRPKTNDVDKQIIKFIR-QHEGKSGIIYCLSRKKVEELAEVLKANEI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 260 KAAPYHAGLDSATRSQTQDDFLMERIDV 287
>gi|407917347|gb|EKG10661.1| Helicase [Macrophomina phaseolina MS6]
Length = 1739
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K ++ L+++ +IK +Y GQSGIVYCL+RK+C+ +A L ++
Sbjct: 1058 FAQSFNRPNLYYEVRTKGKREDTLQKIADIIKTQYRGQSGIVYCLSRKKCEVIAQQLREK 1117
Query: 58 R-INAISYHAGLADKLRNEVQMKW 80
I+A YHAG+ ++E Q W
Sbjct: 1118 HNISAHHYHAGMESAEKSETQKSW 1141
>gi|221069610|ref|ZP_03545715.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni KF-1]
gi|220714633|gb|EED70001.1| ATP-dependent DNA helicase RecQ [Comamonas testosteroni KF-1]
Length = 636
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I KK+V +++ I+ ++ G++G+VYC +RK + +A L Q IN
Sbjct: 203 FISSFDRPNIRYRIAEKKDVSNQLLRFIEREHEGEAGVVYCQSRKRVEELAQTLVQNGIN 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 263 ALPYHAGLPQDMRQNHQDRFL 283
>gi|408827125|ref|ZP_11212015.1| ATP-dependent DNA helicase [Streptomyces somaliensis DSM 40738]
Length = 614
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+ SF+R N++Y I+PK K++++LI+ ++ G +GIVYCL+R + AA L + +
Sbjct: 203 FVDSFDRPNIQYRIVPKNEPRKQLLALIRGEHEGDAGIVYCLSRASVEKTAAFLVEHGVE 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R E Q +++
Sbjct: 263 AVPYHAGLDARTRAENQSRFL 283
>gi|317504966|ref|ZP_07962914.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
gi|315663848|gb|EFV03567.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
Length = 725
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YE+ PK N V K++I I+ ++ G+SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRANLYYEVRPKTNDVDKQIIKFIR-QHEGKSGIIYCLSRKKVEELAEVLKANNI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 260 KAAPYHAGLDSATRSQTQDDFLMERIDV 287
>gi|239610645|gb|EEQ87632.1| RecQ family helicase MusN [Ajellomyces dermatitidis ER-3]
gi|327348921|gb|EGE77778.1| RecQ family helicase MusN [Ajellomyces dermatitidis ATCC 18188]
Length = 1562
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ- 56
F+ SFNR NL YE+ K NV+ + IK YSG++GI+YCL+R+ C+ VA L
Sbjct: 885 FVQSFNRPNLIYEVRRKPKGTNVVASIAETIKGSYSGKAGIIYCLSRQSCERVAEQLRDT 944
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A+ YHAGL R +Q W K +V
Sbjct: 945 HKIKAVHYHAGLPSNDRISIQRDWQRGKYNV 975
>gi|261195180|ref|XP_002623994.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
gi|239587866|gb|EEQ70509.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
Length = 1562
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ- 56
F+ SFNR NL YE+ K NV+ + IK YSG++GI+YCL+R+ C+ VA L
Sbjct: 885 FVQSFNRPNLIYEVRRKPKGTNVVASIAETIKGSYSGKAGIIYCLSRQSCERVAEQLRDT 944
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A+ YHAGL R +Q W K +V
Sbjct: 945 HKIKAVHYHAGLPSNDRISIQRDWQRGKYNV 975
>gi|365875470|ref|ZP_09414998.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442588734|ref|ZP_21007544.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
gi|365756729|gb|EHM98640.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442561492|gb|ELR78717.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
Length = 735
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ SFNR NL YE+ PK N+ KE++ IKA+ +G+SGIVYCL+R++ + A L +N
Sbjct: 202 YKESFNRPNLFYEVRPKVNIDKEIVKFIKAQ-NGKSGIVYCLSRRKVEEFAQLLQVNGLN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R Q K++ +V V
Sbjct: 261 ALPYHAGLDAKTRVANQDKFLMEEVDV 287
>gi|324502777|gb|ADY41219.1| ATP-dependent DNA helicase Q1 [Ascaris suum]
Length = 502
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR NL YE+ K + L E++SLI ++ GQSGI+YC +RKEC+ + AL
Sbjct: 165 FRAGFNRPNLYYEVRNKPSSSEQFLDELVSLINDRFDGQSGIIYCFSRKECEDLTHALRS 224
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+I A YHA L R+ +WI +V V TV
Sbjct: 225 RKIKAAHYHAYLESDKRSRTHERWIGGEVDVIVATV 260
>gi|387814250|ref|YP_005429733.1| ATP-dependent DNA helicase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381339263|emb|CCG95310.1| ATP-dependent DNA helicase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 625
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I PK N K+++ IKA++ G GIVYCL+R + D+ A L+ +
Sbjct: 213 FISGFDRPNIQYRITPKTNANKQLLGFIKAEHEGDCGIVYCLSRNKVDATARLLSSKGYT 272
Query: 61 AISYHAGLA--DKLRNE 75
A+ YHAGL+ D+ RN+
Sbjct: 273 ALPYHAGLSAEDRARNQ 289
>gi|296813367|ref|XP_002847021.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
gi|238842277|gb|EEQ31939.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
Length = 1550
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K ++ LK++ LI YSG+ GI+YCL+RK C+ VA L+ +
Sbjct: 893 FTQSFNRPNLTYEVRKKGRAQDALKDIADLITTDYSGKCGIIYCLSRKTCERVAMQLSSK 952
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNK 84
+ YHAGL+ K R VQ W S +
Sbjct: 953 FGVKTAHYHAGLSSKERFAVQRDWQSGR 980
>gi|224827278|ref|ZP_03700371.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania ferrooxidans
2002]
gi|224600491|gb|EEG06681.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania ferrooxidans
2002]
Length = 628
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R NL Y+++ K N K++++ I+ Y G SGIVYCL+RK + A L + I
Sbjct: 223 FLSSFDRPNLFYQVVEKHNAKKQLLAFIQQDYPGASGIVYCLSRKRVEDTAQWLVENGIR 282
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R+ Q +++
Sbjct: 283 ALPYHAGLGHEVRDRHQREFL 303
>gi|326330955|ref|ZP_08197254.1| ATP-dependent DNA helicase RecQ [Nocardioidaceae bacterium Broad-1]
gi|325951166|gb|EGD43207.1| ATP-dependent DNA helicase RecQ [Nocardioidaceae bacterium Broad-1]
Length = 615
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK K+++ LI+ ++ G++GIVYCL+R + AA+L + I
Sbjct: 206 FVASFDRPNIQYRIAPKDKPAKQLVDLIRTEHPGEAGIVYCLSRASVERTAASLVGQGIP 265
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R E Q +++
Sbjct: 266 ALPYHAGLDARTRAENQSRFL 286
>gi|238022984|ref|ZP_04603410.1| hypothetical protein GCWU000324_02906 [Kingella oralis ATCC 51147]
gi|237865792|gb|EEP66930.1| hypothetical protein GCWU000324_02906 [Kingella oralis ATCC 51147]
Length = 604
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ ++N K+++ I+ + +GQSGIVYCL+RK + +A L +N
Sbjct: 195 FISSFDRPNIHYQVIERQNGKKQLLDFIQKQAAGQSGIVYCLSRKSVEDIAQYLCDSGLN 254
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAGL + R++ Q ++
Sbjct: 255 ALPYHAGLPIQTRSQNQHRF 274
>gi|221505512|gb|EEE31157.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 1753
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SF+R NL+YE+ PK + +++++ + IK ++ G SGIVYCL+R+EC+ VA L +
Sbjct: 925 FQGSFDRPNLRYEVRPKVPRRIVEDIAATIKTEFHGLSGIVYCLSRRECERVAEGLQRHA 984
Query: 59 -INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A YHA L + R E+Q W+++ + V
Sbjct: 985 GISAGFYHAQLDAEKREEIQRDWMNDDIKV 1014
>gi|237838631|ref|XP_002368613.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211966277|gb|EEB01473.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
Length = 1753
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SF+R NL+YE+ PK + +++++ + IK ++ G SGIVYCL+R+EC+ VA L +
Sbjct: 925 FQGSFDRPNLRYEVRPKVPRRIVEDIAATIKTEFHGLSGIVYCLSRRECERVAEGLQRHA 984
Query: 59 -INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A YHA L + R E+Q W+++ + V
Sbjct: 985 GISAGFYHAQLDAEKREEIQRDWMNDDIKV 1014
>gi|163754961|ref|ZP_02162082.1| ATP-dependent DNA helicase recQ [Kordia algicida OT-1]
gi|161325028|gb|EDP96356.1| ATP-dependent DNA helicase recQ [Kordia algicida OT-1]
Length = 700
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 2 ISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
I+SF+R NLK E+ P + +K++IS I + + +SGI+YCL+RK ++VA L INA
Sbjct: 197 IASFDRKNLKLEVRPANDRVKQIISFIDERPT-ESGIIYCLSRKATETVAEKLQNANINA 255
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
I+YHAG+A R+++Q +I++ V
Sbjct: 256 IAYHAGIAHTKRSKIQEDFINDTCQV 281
>gi|374108619|gb|AEY97525.1| FAFL159Wp [Ashbya gossypii FDAG1]
Length = 1323
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR+NL YE+L K KN LK++ IK ++ GQ+GI+YC ++ C+ AA + +
Sbjct: 755 SFNRSNLYYEVLRKDKNSLKDISHSIKTRFKGQTGIIYCHSKNSCEQTAAIVQDSGVRCA 814
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R +Q +W S+K+ V
Sbjct: 815 YYHAGMEPDERLAIQQQWQSDKIQV 839
>gi|302308466|ref|NP_985391.2| AFL159Wp [Ashbya gossypii ATCC 10895]
gi|299790644|gb|AAS53215.2| AFL159Wp [Ashbya gossypii ATCC 10895]
Length = 1323
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR+NL YE+L K KN LK++ IK ++ GQ+GI+YC ++ C+ AA + +
Sbjct: 755 SFNRSNLYYEVLRKDKNSLKDISHSIKTRFKGQTGIIYCHSKNSCEQTAAIVQDSGVRCA 814
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R +Q +W S+K+ V
Sbjct: 815 YYHAGMEPDERLAIQQQWQSDKIQV 839
>gi|365122666|ref|ZP_09339566.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363642172|gb|EHL81539.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 726
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK +N+ +++I IK++ SG+SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTQNIDRDIIKYIKSQ-SGKSGIIYCLSRKKVEELAETLKVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA+ YHAG+ R + Q ++ KV V
Sbjct: 260 NALPYHAGMDSATRTQNQDAFLLEKVDV 287
>gi|428210292|ref|YP_007094645.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
gi|428012213|gb|AFY90776.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
Length = 708
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK K +++ +I+ S SGIVYCL+R++ D +A L Q++I
Sbjct: 203 IASFNRPNLYYEVQPKQKQSYSQLLQIIRQ--SEGSGIVYCLSRRKVDEIAFKLQQDKIA 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL+D R E Q ++I + V V
Sbjct: 261 ALPYHAGLSDTERAENQTRFIRDDVRV 287
>gi|379710384|ref|YP_005265589.1| ATP-dependent DNA helicase [Nocardia cyriacigeorgica GUH-2]
gi|374847883|emb|CCF64955.1| ATP-dependent DNA helicase [Nocardia cyriacigeorgica GUH-2]
Length = 623
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK ++++ I+A+++G +GIVYCL+R + AA L + I
Sbjct: 213 FVASFDRPNIQYRIEPKNRPDRQLLDFIRAEHAGDAGIVYCLSRNSVEKTAAFLTENGIR 272
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++ R E Q +++
Sbjct: 273 AVPYHAGLDNRTRAENQARFL 293
>gi|297622522|ref|YP_003703956.1| ATP-dependent DNA helicase RecQ [Truepera radiovictrix DSM 17093]
gi|297163702|gb|ADI13413.1| ATP-dependent DNA helicase RecQ [Truepera radiovictrix DSM 17093]
Length = 598
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R NL+Y ++PK + +S +A++ G +GIVYCL+R+ + AA L + +
Sbjct: 196 FVSSFDRPNLRYTVVPKAGAKGQFLSFYRARHQGGAGIVYCLSRRSVEETAAWLVKAGVE 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R E Q +++
Sbjct: 256 ALPYHAGLSAAVRQEHQERFL 276
>gi|148258132|ref|YP_001242717.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. BTAi1]
gi|146410305|gb|ABQ38811.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. BTAi1]
Length = 625
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 56/82 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ + IK ++ G +G+VYCL+R + + AAAL + I
Sbjct: 206 FVASFDRPNIRYEIVDKNNGPAQLKAFIKERHPGDAGVVYCLSRAKVEDTAAALTEAGIT 265
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
AI YHAGL +R+ Q ++I+
Sbjct: 266 AIPYHAGLEASVRSRNQDRFIN 287
>gi|147919945|ref|YP_686301.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
gi|110621697|emb|CAJ36975.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
Length = 605
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++ SFNR NL+YE+ KK+ +++S I A+ G+SGIVYCL RK + +A L + I
Sbjct: 201 YLGSFNRINLRYEVREKKDATAQILSYI-ARNRGKSGIVYCLARKTTEELAEKLRRAGIK 259
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHA L D +R+ Q K++ + V V TV
Sbjct: 260 ALPYHADLPDTVRSATQEKFVRDDVEVVCATV 291
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQ 56
F SFNR NL YE+ K KN L + SLIK + Q+GI+YC +RK+C+++A AL +Q
Sbjct: 497 FTQSFNRPNLYYEVRMKGKGKNDLASIASLIKDDHPKQTGIIYCFSRKDCENMANALQSQ 556
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ + VQ +W + + HV
Sbjct: 557 HGIKAHHYHAGMEGPEKANVQKEWQAGRYHV 587
>gi|357043893|ref|ZP_09105579.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
gi|355367947|gb|EHG15373.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
Length = 727
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKKN K++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKKNDDDTNKQIIKFIK-QHAGKSGIIYCLSRKKVEELAAILQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ ++ V
Sbjct: 260 DIKAAPYHAGLDSETRSKTQDDFLMEEIDV 289
>gi|282860206|ref|ZP_06269280.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|424899672|ref|ZP_18323214.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
gi|282587027|gb|EFB92258.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|388591872|gb|EIM32111.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
Length = 727
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKK + K++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FRSSFNRPNLYYEVRPKKSEDDTNKQIIRFIK-QHTGKSGIIYCLSRKKVEELAAVLLAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL ++R++ Q +++ + V
Sbjct: 260 DIKAAPYHAGLDSEVRSKTQDQFLMEDIDV 289
>gi|347541663|ref|YP_004849089.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania sp. NH8B]
gi|345644842|dbj|BAK78675.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania sp. NH8B]
Length = 600
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R NL Y+++ K N K++++ I+ Y G SGIVYCL+RK + A L + I
Sbjct: 195 FLSSFDRPNLFYQVVEKHNAKKQLLAFIQQDYPGASGIVYCLSRKRVEDTAQWLVENGIR 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R+ Q +++
Sbjct: 255 ALPYHAGLGHEVRDRHQREFL 275
>gi|443695320|gb|ELT96261.1| hypothetical protein CAPTEDRAFT_131881 [Capitella teleta]
Length = 570
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 3 SSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
+SFNRANL YE+ PK + +++E++ LI+ ++ QSGIVYCLT+K+ + +A L
Sbjct: 283 ASFNRANLFYEVRPKPSNAHALVEEIVDLIQTRFRDQSGIVYCLTQKDSEEMARQLQSHG 342
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHA + K R+ KW +NK+ V
Sbjct: 343 LTAACYHAQMDAKHRSLAHRKWTTNKIQV 371
>gi|170078505|ref|YP_001735143.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
gi|169886174|gb|ACA99887.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
Length = 712
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 3 SSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
+SFNR NL YE+LPK + +++ ++ + GQ GI+YC +RK+ D +A L Q+ + A
Sbjct: 204 TSFNRPNLYYEVLPKVRKSYTQLLCYVRQR-RGQPGIIYCSSRKKVDELADRLKQDGVKA 262
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGLAD+LR + Q ++I + V V
Sbjct: 263 LPYHAGLADRLRADYQEQFIRDDVPV 288
>gi|385650929|ref|ZP_10045482.1| ATP-dependent DNA helicase RecQ [Leucobacter chromiiresistens JG
31]
Length = 686
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I K+N +++S + ++SG++GIVY L+RK + AAAL ++
Sbjct: 266 FVSSFDRPNIRYRIESKQNARAQLVSFVSREHSGEAGIVYALSRKRVEQTAAALRDAGVD 325
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAGL +R + Q +++
Sbjct: 326 AVAYHAGLPAHVRLDAQTRFL 346
>gi|312199738|ref|YP_004019799.1| ATP-dependent DNA helicase RecQ [Frankia sp. EuI1c]
gi|311231074|gb|ADP83929.1| ATP-dependent DNA helicase RecQ [Frankia sp. EuI1c]
Length = 647
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N+ Y I+PKK K+++ L++ +++G++GIVYCL+R + A LA I
Sbjct: 231 FVADFDRPNISYRIVPKKEPKKQLLDLLRTEHAGEAGIVYCLSRSSVEQTADFLASNGIK 290
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +LR Q +++
Sbjct: 291 ALPYHAGLDSRLRATNQARFL 311
>gi|427733629|ref|YP_007053173.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
gi|427368670|gb|AFY52626.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
Length = 719
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PKK N E++ LI+ SGI+YCLTRK+ + +A L ++I+
Sbjct: 203 IASFNRQNLYYEVRPKKKNSYVELLGLIQDNEG--SGIIYCLTRKKVEELAFKLQHDKIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL+D R+E Q K+I + +
Sbjct: 261 ALPYHAGLSDVERSENQTKFIRDDARI 287
>gi|388581963|gb|EIM22269.1| ATP-dependent DNA helicase [Wallemia sebi CBS 633.66]
Length = 1115
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 3 SSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER-I 59
SSFNR NL YEI PK K V ++ +LI K+ GQ+GI+YC +++ C+ VA+ L E +
Sbjct: 565 SSFNRKNLFYEIKPKNGKTVYADIQNLINNKFRGQTGIIYCSSKRACEDVASKLRHEYGL 624
Query: 60 NAISYHAGLADKLRNEVQMKWISNK 84
A YHAGL+ R ++Q+ W N+
Sbjct: 625 PAQHYHAGLSRDDRTKIQINWQKNR 649
>gi|147783250|emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]
Length = 1640
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQERIN 60
+SF+R+NLKYE++ K K LK++ L+K ++ GIVYCL++ EC V+ L + +I
Sbjct: 508 TSFDRSNLKYEVIGKTKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIK 567
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL+ + R +VQ KW + KVH+
Sbjct: 568 TVYYHAGLSARQRIDVQKKWHTGKVHI 594
>gi|121603031|ref|YP_980360.1| ATP-dependent DNA helicase RecQ [Polaromonas naphthalenivorans CJ2]
gi|120592000|gb|ABM35439.1| ATP-dependent DNA helicase RecQ [Polaromonas naphthalenivorans CJ2]
Length = 639
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K + ++++ I+A++ G++GIVYC +RK + +A L I
Sbjct: 220 FLSSFDRPNIRYTIVEKTDATRQLLRFIQAEHHGEAGIVYCQSRKRVEEIAGMLEDAGIK 279
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAGL KLR + Q +++
Sbjct: 280 AMAYHAGLDAKLRQQRQDRFL 300
>gi|407804673|ref|ZP_11151487.1| ATP-dependent DNA helicase RecQ [Alcanivorax sp. W11-5]
gi|407021366|gb|EKE33140.1| ATP-dependent DNA helicase RecQ [Alcanivorax sp. W11-5]
Length = 601
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I K N ++++ ++A++ G +GIVYCL+R + D+ A L Q+ N
Sbjct: 196 FVSSFDRPNIQYRITQKSNARQQLLRFLRAEHPGDAGIVYCLSRNKVDTTAEWLQQQGFN 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R + Q +++
Sbjct: 256 ALPYHAGLPAAQRRDHQQRFL 276
>gi|383830258|ref|ZP_09985347.1| ATP-dependent DNA helicase RecQ [Saccharomonospora xinjiangensis
XJ-54]
gi|383462911|gb|EID55001.1| ATP-dependent DNA helicase RecQ [Saccharomonospora xinjiangensis
XJ-54]
Length = 607
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PKK+ K+V+ ++A++ G +GIVYCL+R+ + A L + I
Sbjct: 197 FVSSFDRPNIQYRIVPKKDPRKQVLEFLRAEHPGDAGIVYCLSRRSVEETAEFLTRNGIE 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 ALPYHAGLDAGTRARHQSRFL 277
>gi|440794424|gb|ELR15585.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 773
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-R 58
F SFNR NL+YE+ K N ++++ + I Y+G +GI+YCL+R EC+ A LA +
Sbjct: 371 FTQSFNRHNLRYEVRAKNNKSVEDMAAFITNNYAGATGIIYCLSRSECERTAEQLANQWG 430
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVV----SKECDSVAAALAQERINAISY 114
++A YHA L ++ RN W+ +VHV TV + ++AA Q + ++
Sbjct: 431 VSATYYHASLLEQERNRRHKLWMKGRVHVMVATVAFGIGAPPSPALAAGDRQTSSHQTTH 490
Query: 115 HAGL 118
+ GL
Sbjct: 491 NLGL 494
>gi|237747534|ref|ZP_04578014.1| ATP-dependent DNA helicase [Oxalobacter formigenes OXCC13]
gi|229378896|gb|EEO28987.1| ATP-dependent DNA helicase [Oxalobacter formigenes OXCC13]
Length = 608
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I+ K+N +++ I++++ G +GIVYCL+RK+ D + A L + IN
Sbjct: 200 FISSFDRPNIRYCIVEKENGRHQLLDFIQSEHPGDAGIVYCLSRKKVDEMVAFLLEHHIN 259
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ + R+ Q +++
Sbjct: 260 ALPYHAGMDTQTRSVNQSRFL 280
>gi|260906679|ref|ZP_05915001.1| ATP-dependent DNA helicase RecQ [Brevibacterium linens BL2]
Length = 611
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y I PK++ ++IS I ++ G SGIVYCL+R+ + +A AL I+
Sbjct: 200 FVASFDRPNITYRIEPKQSGRSQLISFITTEHPGDSGIVYCLSRRGVEQLADALVARGIS 259
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R E Q +++
Sbjct: 260 ALPYHAGLPSEVRAEHQARFL 280
>gi|302883319|ref|XP_003040560.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
gi|256721447|gb|EEU34847.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K + E+ SLIK+KY+ QSGIVY ++RK + VA +L+ +
Sbjct: 271 FSQSFNRPNLYYEVRGKTTNAKCMDEIASLIKSKYANQSGIVYTVSRKNAEKVAESLSDQ 330
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG+ + + EVQ+ W ++ +
Sbjct: 331 GITARHYHAGVDPQEKAEVQIAWQQGQIKI 360
>gi|440494379|gb|ELQ76762.1| ATP-dependent DNA helicase [Trachipleistophora hominis]
Length = 838
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NLKY +LPKK + + +++S I Y GI+Y ++++E + V+ L I
Sbjct: 533 FRSSFNRKNLKYIVLPKKKDTITQIVSFINTYYPRSPGIIYVISKREAEEVSHKL-NGHI 591
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
++ YHAGL K RN VQ KW +++V V
Sbjct: 592 TSLYYHAGLTKKERNAVQRKWSTDEVRV 619
>gi|145496268|ref|XP_001434125.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401248|emb|CAK66728.1| unnamed protein product [Paramecium tetraurelia]
Length = 889
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 3 SSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
SSFNR NL YE+ + K ++E+ I Y QSGI+YCLT+ EC +++ L I
Sbjct: 272 SSFNRPNLVYEVRCREEFKKAVQEIKEFINQTYPKQSGIIYCLTQSECQTLSQNLIYHGI 331
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKEC 97
+ YHAGL +K R+ + W+ N+V W + K+C
Sbjct: 332 GSDFYHAGLTEKERHRIHKNWLMNEVQHLVWELTKKDC 369
>gi|117924742|ref|YP_865359.1| ATP-dependent DNA helicase RecQ [Magnetococcus marinus MC-1]
gi|117608498|gb|ABK43953.1| ATP-dependent DNA helicase RecQ [Magnetococcus marinus MC-1]
Length = 605
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y +LPK+N +++ ++ ++ G SGI+YCL+RK + VAA L E
Sbjct: 202 FVASFDRPNIRYRVLPKENGKQQIKRFLEQEHKGDSGIIYCLSRKRTEEVAAWLNGEGFT 261
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 262 AVPYHAGLPHEQRERNQQRFL 282
>gi|119899607|ref|YP_934820.1| ATP-dependent DNA helicase [Azoarcus sp. BH72]
gi|119672020|emb|CAL95934.1| ATP-dependent DNA helicase [Azoarcus sp. BH72]
Length = 615
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I+ K + ++++ I+ ++ ++G+VYCL+R++ + AA L ++ IN
Sbjct: 211 FISSFDRPNIRYTIVDKDDPRRQLLHFIREEFPSEAGVVYCLSRRKVEETAAWLQEQGIN 270
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R E Q +++
Sbjct: 271 ALPYHAGLGQDVRAEHQTRFL 291
>gi|395213964|ref|ZP_10400385.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394456500|gb|EJF10790.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 726
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PK N K+VI +K K+ G+SG++YCL+RK+ + +A L I
Sbjct: 200 FKSSFNRTNLYYEVRPKHNTKKQVIQYVK-KHKGKSGVIYCLSRKKVEEIAELLRVNDIK 258
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL +R Q +++ + V
Sbjct: 259 ALPYHAGLDSNIRMANQDAFLNEEADV 285
>gi|226356050|ref|YP_002785790.1| ATP-dependent DNA helicase [Deinococcus deserti VCD115]
gi|226318040|gb|ACO46036.1| putative ATP-dependent DNA helicase RecQ [Deinococcus deserti
VCD115]
Length = 731
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 58/84 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y + K+ +++ I+A++ G +GIVYCL+RK + A L + ++
Sbjct: 203 FVSSFDRPNIQYRVTAKEGPKTQLLDFIRAEHPGDAGIVYCLSRKSVEETARWLQSQGVD 262
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A++YHAGL+ + RN+ Q ++++ +
Sbjct: 263 AVAYHAGLSPRERNQAQERFLNEE 286
>gi|340786036|ref|YP_004751501.1| ATP-dependent DNA helicase [Collimonas fungivorans Ter331]
gi|340551303|gb|AEK60678.1| ATP-dependent DNA helicase [Collimonas fungivorans Ter331]
Length = 614
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ I+++++G +GIVYCL+RK+ + A L Q+ I
Sbjct: 208 FVSSFDRPNIRYQIVEKANGRKQLLDFIQSEHAGDAGIVYCLSRKKVEETAEFLEQQGIQ 267
Query: 61 AISYHAGL--ADKLRNE 75
A+ YHAG+ A + RN+
Sbjct: 268 ALPYHAGMDYAQRTRNQ 284
>gi|115526900|ref|YP_783811.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisA53]
gi|115520847|gb|ABJ08831.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisA53]
Length = 617
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 57/82 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ + I +++G SGIVYCL+R + + AAAL++ I
Sbjct: 207 FVASFDRPNIRYEIVDKHNAPSQLKAFIDERHAGDSGIVYCLSRAKVEDTAAALSRAGIT 266
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R + Q ++I+
Sbjct: 267 ALPYHAGLDAGVRAKNQDRFIN 288
>gi|356533550|ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
1-like [Glycine max]
Length = 612
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NLKYE++ K K LK++ L+ ++ Q GIVYCL++ EC V+ L ++ +I
Sbjct: 400 SFDRPNLKYEVIAKTKEPLKQLGQLLIDRFRNQCGIVYCLSKSECVEVSKFLNEKCKIKT 459
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGLA + R VQ KW +VH+
Sbjct: 460 VYYHAGLAARQRVAVQKKWYDGEVHI 485
>gi|404406052|ref|ZP_10997636.1| ATP-dependent DNA helicase RecQ [Alistipes sp. JC136]
Length = 730
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNRANL YEI PK+NV +++I IK + G+SGI+YCL+RK+ + + L I
Sbjct: 203 FKSSFNRANLYYEIRPKRNVDRDIIRFIK-QNEGKSGIIYCLSRKKVEELTELLVANGIR 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAG+ R Q ++ +V V
Sbjct: 262 ALAYHAGMDAVTRAANQDDFLMERVEV 288
>gi|331696960|ref|YP_004333199.1| ATP-dependent DNA helicase RecQ [Pseudonocardia dioxanivorans
CB1190]
gi|326951649|gb|AEA25346.1| ATP-dependent DNA helicase RecQ [Pseudonocardia dioxanivorans
CB1190]
Length = 606
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK ++++ L++A+++G +GIVYCL+R++ + VA L + I
Sbjct: 197 FVASFDRPNIQYRIVPKAEERRQLLELLRAEHAGDAGIVYCLSRRKVEQVAEFLTAQGIT 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 257 ALPYHAGLEAPVRAANQARFL 277
>gi|421862622|ref|ZP_16294328.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309380112|emb|CBX21523.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 193
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ I+ + +GQSGIVYCL+RK+ + VA L + N
Sbjct: 73 FVSSFDRPNIYYQVIEKNNGKKQLLEFIRKEMAGQSGIVYCLSRKKVEDVARFLRENGFN 132
Query: 61 AISYHAGLA-DKLRNEVQ 77
AI YHAGL D L+ +Q
Sbjct: 133 AIPYHAGLGMDVLQPNLQ 150
>gi|452911154|ref|ZP_21959825.1| ATP-dependent DNA helicase RecQ [Kocuria palustris PEL]
gi|452833580|gb|EME36390.1| ATP-dependent DNA helicase RecQ [Kocuria palustris PEL]
Length = 616
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 59/81 (72%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K ++++SLI+ ++ G +GIVYCL+RK + AA L+++ I+
Sbjct: 204 FVASFDRPNIQYRIVEKDQPRQQLLSLIRNEHPGDAGIVYCLSRKSVEQTAAFLSKQGID 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A +YHAGL + R++ Q +++
Sbjct: 264 AEAYHAGLTESERSQRQARFL 284
>gi|116180606|ref|XP_001220152.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
gi|88185228|gb|EAQ92696.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
Length = 1451
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQER 58
F SFNR NL YE++PK + + LI KY GQ GIVYCL+RK + A AL +
Sbjct: 763 FTQSFNRPNLYYEVIPKAARFIGGMGKLITTKYPGQCGIVYCLSRKSAEGTATALVTKHN 822
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + + EVQ KW +VHV
Sbjct: 823 IKARYYHAQMDPEAKVEVQEKWQKGEVHV 851
>gi|327402848|ref|YP_004343686.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
gi|327318356|gb|AEA42848.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
Length = 726
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI K+NV KE+I I+ + G+SGI+YCL+RK+ + A L IN
Sbjct: 200 FKSSFNRDNLYYEIRAKQNVEKEIIKYIRQR-EGKSGIIYCLSRKKVEETAELLQVNGIN 258
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAGL R Q ++ +V V
Sbjct: 259 ALAYHAGLDATTRARHQDMFLMEEVDV 285
>gi|365091573|ref|ZP_09328928.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. NO-1]
gi|363415884|gb|EHL23008.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. NO-1]
Length = 623
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I KK+V +++ I+ +++G++G+VYC +RK + +AA L I
Sbjct: 203 FISSFDRPNIRYRIEEKKDVTTQLLRFIEREHAGEAGVVYCQSRKRVEELAATLCDAGIT 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL K+R + Q +++
Sbjct: 263 ALPYHAGLDTKVRQKNQDRFL 283
>gi|325266864|ref|ZP_08133535.1| ATP-dependent helicase RecQ [Kingella denitrificans ATCC 33394]
gi|324981605|gb|EGC17246.1| ATP-dependent helicase RecQ [Kingella denitrificans ATCC 33394]
Length = 600
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 54/80 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y+++ K N K+++ I+ + GQ+GIVYCL+RK + AA L + +N
Sbjct: 196 FISSFDRPNIYYQVMEKNNGKKQLLDFIQKQMHGQNGIVYCLSRKSVEDTAAFLCENGLN 255
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAG++ + R Q ++
Sbjct: 256 AVPYHAGMSLETRQHHQHRF 275
>gi|380302734|ref|ZP_09852427.1| ATP-dependent DNA helicase RecQ [Brachybacterium squillarum M-6-3]
Length = 615
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK +++ LI++++ G++GIVYCL+RK + AA L + +
Sbjct: 204 FVASFDRPNIQYRIDPKDRARDQLLRLIRSEHPGEAGIVYCLSRKSVEQTAAWLEGQGVA 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R E Q +++
Sbjct: 264 ALPYHAGLDARVRQEHQERFL 284
>gi|373955135|ref|ZP_09615095.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373891735|gb|EHQ27632.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 713
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I PKKN ++I+ +K ++ SGI+YCL+R+ + +A AL + +
Sbjct: 196 FVSSFDRKNINYRIAPKKNSFTQLIAFLK-EHQDDSGIIYCLSRQSTEDLATALQAQGYS 254
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL K++++ Q +++ +++ +
Sbjct: 255 AQAYHAGLEKKIKDQNQERFLRDEIKI 281
>gi|425433706|ref|ZP_18814184.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
gi|389675683|emb|CCH95185.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
Length = 701
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK K SGIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGKKG--SGIVYCISRKTVDQVAEHLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+E Q ++I + V + T+
Sbjct: 261 ALPYHAGMNDQERSENQTRFIRDDVQIMVATI 292
>gi|389873105|ref|YP_006380524.1| ATP-dependent DNA helicase [Advenella kashmirensis WT001]
gi|388538354|gb|AFK63542.1| ATP-dependent DNA helicase [Advenella kashmirensis WT001]
Length = 609
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 59/83 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N++Y I+ K +V ++++ I+ +++G SGIVYCL+R + + A L +E I+
Sbjct: 198 FVAGFDRPNIRYVIVEKNDVRRQLLGFIREEHAGDSGIVYCLSRNKTEDTAEFLCREGID 257
Query: 61 AISYHAGLADKLRNEVQMKWISN 83
A++YHAGL +LR + Q +++ +
Sbjct: 258 AMAYHAGLPAELRAQRQARFLRD 280
>gi|303236792|ref|ZP_07323371.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
gi|302482960|gb|EFL45976.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
Length = 750
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNRANL YE+ PKKN +++I IK + G+SGI+YCL+RK+ + +AA L
Sbjct: 224 FKSSFNRANLYYEVRPKKNEEDTNRQIIKFIK-QNQGKSGIIYCLSRKKVEELAAVLQAN 282
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ + V
Sbjct: 283 EIKAEPYHAGLDSETRSKTQDDFLMENIDV 312
>gi|333984849|ref|YP_004514059.1| ATP-dependent DNA helicase RecQ [Methylomonas methanica MC09]
gi|333808890|gb|AEG01560.1| ATP-dependent DNA helicase RecQ [Methylomonas methanica MC09]
Length = 734
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I+ K N ++++ I+A+++G +GIVYCL+RK+ + A L Q+ I
Sbjct: 222 FISGFDRPNIRYRIVQKDNARQQLLGFIRAEHAGDTGIVYCLSRKKVEDTAEWLNQKGIR 281
Query: 61 AISYHAGLADKLRNEVQ 77
A+ YHAG++ + R + Q
Sbjct: 282 ALPYHAGMSHEKRQQNQ 298
>gi|425450984|ref|ZP_18830806.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
gi|389767941|emb|CCI06812.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
Length = 701
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK K SGIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGKKG--SGIVYCISRKTVDQVAEHLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+E Q ++I + V + T+
Sbjct: 261 ALPYHAGMNDQERSENQTRFIRDDVQIMVATI 292
>gi|406933324|gb|EKD68008.1| hypothetical protein ACD_48C00110G0001, partial [uncultured
bacterium]
Length = 334
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R NL +LP K ++ +I+ +K K +SGI+YCL+R + + VA AL QE IN
Sbjct: 197 FISSFDRPNLALNVLPAKKRIERIITFVK-KRKHESGIIYCLSRNQTEKVATALIQEGIN 255
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAG+ R + Q +I + ++ TV
Sbjct: 256 AGYYHAGMQSHERAKAQDDFIHGRTNIVVATV 287
>gi|146338225|ref|YP_001203273.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. ORS 278]
gi|146191031|emb|CAL75036.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. ORS 278]
Length = 624
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 56/82 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ + IK ++ G +G+VYCL+R + + AAAL + I
Sbjct: 206 FVASFDRPNIRYEIVDKNNGPAQLKAFIKERHPGDAGVVYCLSRAKVEDTAAALNEAGIT 265
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
AI YHAGL +R+ Q ++I+
Sbjct: 266 AIPYHAGLDPAVRSRNQDRFIN 287
>gi|344942347|ref|ZP_08781635.1| ATP-dependent DNA helicase RecQ [Methylobacter tundripaludum SV96]
gi|344263539|gb|EGW23810.1| ATP-dependent DNA helicase RecQ [Methylobacter tundripaludum SV96]
Length = 712
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++S F+R N++Y I+ K+N ++I I+A+++G +GIVYCL+RK+ D+ A L + +N
Sbjct: 196 YLSGFDRPNIRYRIVQKQNARDQLIDFIRAEHTGDAGIVYCLSRKKVDATAEWLRTKGVN 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ LR + Q +++
Sbjct: 256 ALPYHAGMDAGLRAKHQHQFL 276
>gi|328948910|ref|YP_004366247.1| RecQ familyATP-dependent DNA helicase [Treponema succinifaciens DSM
2489]
gi|328449234|gb|AEB14950.1| ATP-dependent DNA helicase, RecQ family [Treponema succinifaciens
DSM 2489]
Length = 520
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SFNR N+ +++ K +++V++ I+ + QSGI+YC +RK+ D VA L RI
Sbjct: 203 FMASFNRPNIFLQVIKKDKPIEQVLNFIE-NHPNQSGIIYCFSRKQVDLVAQELHINRIK 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+SYHAGL D R + Q +IS+K + TV
Sbjct: 262 ALSYHAGLNDAQRTKNQQDFISDKADIMVATV 293
>gi|415909075|ref|ZP_11553081.1| ATP-dependent DNA helicase, partial [Herbaspirillum frisingense
GSF30]
gi|407762664|gb|EKF71471.1| ATP-dependent DNA helicase, partial [Herbaspirillum frisingense
GSF30]
Length = 584
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ IK+++ +GIVYCL+RK+ + A L E IN
Sbjct: 178 FVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPEDAGIVYCLSRKKVEETAEFLRGEGIN 237
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ LR Q +++
Sbjct: 238 ALAYHAGMDYALRTANQARFL 258
>gi|409404383|ref|ZP_11252862.1| ATP-dependent DNA helicase [Herbaspirillum sp. GW103]
gi|386435902|gb|EIJ48725.1| ATP-dependent DNA helicase [Herbaspirillum sp. GW103]
Length = 617
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ IK+++ +GIVYCL+RK+ + A L E +N
Sbjct: 208 FVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPDDAGIVYCLSRKKVEETAEFLRGEGLN 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ LR Q +++
Sbjct: 268 ALAYHAGMDYALRTRNQARFL 288
>gi|257068952|ref|YP_003155207.1| ATP-dependent DNA helicase RecQ [Brachybacterium faecium DSM 4810]
gi|256559770|gb|ACU85617.1| ATP-dependent DNA helicase RecQ [Brachybacterium faecium DSM 4810]
Length = 631
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I PK + ++++ LI ++ G+SGIVYCL+RK + A AL I
Sbjct: 215 FVSSFDRPNIQYRIEPKASPREQLLRLITTEHEGESGIVYCLSRKSVEQTAEALVARGIP 274
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R + Q +++
Sbjct: 275 ALPYHAGLDAAVRQDHQERFL 295
>gi|255535742|ref|YP_003096113.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
gi|255341938|gb|ACU08051.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
Length = 732
Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SFNR NL YE+ PK N+ +E++ I A+ G+SGIVYCL+R++ + A L IN
Sbjct: 202 FKESFNRPNLYYEVRPKVNIDREIVKFINAR-KGKSGIVYCLSRRKVEEFAQLLQVNGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R Q K++ + V
Sbjct: 261 ALPYHAGLDQKTRVMNQDKFLMEEADV 287
>gi|375102628|ref|ZP_09748891.1| ATP-dependent DNA helicase RecQ [Saccharomonospora cyanea NA-134]
gi|374663360|gb|EHR63238.1| ATP-dependent DNA helicase RecQ [Saccharomonospora cyanea NA-134]
Length = 611
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PKK+ K+++ ++ ++SG +GIVYCL+R+ + A L + I
Sbjct: 197 FVSSFDRPNIQYRIVPKKDPRKQLLDFLRTEHSGDAGIVYCLSRRSVEETAEFLTRNGIE 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 ALPYHAGLDAGTRARHQARFL 277
>gi|6714387|gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana]
Length = 624
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NLKYE++ K K LK++ L++ ++ QSGIVYCL++ EC VA L ++ ++
Sbjct: 414 SFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKT 473
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAG+ K R +VQ KW + +V +
Sbjct: 474 VYYHAGVPAKQRVDVQRKWQTGEVRI 499
>gi|30679600|ref|NP_187225.2| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
gi|75334309|sp|Q9FT74.1|RQL1_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 1; AltName:
Full=RecQ-like protein 1; Short=AtRecQ1; Short=AtRecQl1
gi|10944747|emb|CAC14163.1| DNA Helicase [Arabidopsis thaliana]
gi|332640767|gb|AEE74288.1| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
Length = 606
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NLKYE++ K K LK++ L++ ++ QSGIVYCL++ EC VA L ++ ++
Sbjct: 396 SFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKT 455
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAG+ K R +VQ KW + +V +
Sbjct: 456 VYYHAGVPAKQRVDVQRKWQTGEVRI 481
>gi|66802111|ref|XP_629849.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|60463228|gb|EAL61421.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 1259
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL Y++L K K V+ ++ I + Y +SGIVYC+++ +C++VA L + +I
Sbjct: 712 FKQSFNRPNLIYQVLKKTKQVVDDMSKFIHSTYPDKSGIVYCISKYDCENVAKRLRELKI 771
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A YHAGL + R +VQ W ++ V
Sbjct: 772 SAAHYHAGLENDERAKVQANWQKGRIKV 799
>gi|365891951|ref|ZP_09430306.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. STM 3809]
gi|365332047|emb|CCE02837.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. STM 3809]
Length = 629
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 56/82 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ + IK ++ G +G+VYCL+R + + AAAL + I
Sbjct: 206 FVASFDRPNIRYEIVDKHNGPAQLKAFIKERHPGDAGVVYCLSRAKVEDTAAALNEAGIT 265
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
AI YHAGL +R+ Q ++I+
Sbjct: 266 AIPYHAGLDPAVRSRNQDRFIN 287
>gi|365882677|ref|ZP_09421875.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. ORS 375]
gi|365288955|emb|CCD94406.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. ORS 375]
Length = 624
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 56/82 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ + IK ++ G +G+VYCL+R + + AAAL + I
Sbjct: 206 FVASFDRPNIRYEIVDKHNGPAQLKAFIKERHPGDAGVVYCLSRAKVEDTAAALNEAGIT 265
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
AI YHAGL +R+ Q ++I+
Sbjct: 266 AIPYHAGLDPAVRSRNQDRFIN 287
>gi|372268417|ref|ZP_09504465.1| ATP-dependent DNA helicase RecQ [Alteromonas sp. S89]
Length = 623
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I K N ++++ ++ ++ G +G++YCL+R + ++ A+ L Q+ N
Sbjct: 207 FVSSFDRPNIQYRIAAKDNPKRQLLQFLRQEHEGDAGVIYCLSRNKVETTASWLQQQGFN 266
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R E Q +++
Sbjct: 267 ALPYHAGLSSTVRAEHQRRFL 287
>gi|408682243|ref|YP_006882070.1| ATP-dependent DNA helicase RecQ [Streptomyces venezuelae ATCC
10712]
gi|328886572|emb|CCA59811.1| ATP-dependent DNA helicase RecQ [Streptomyces venezuelae ATCC
10712]
Length = 680
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N++Y I+PK N K+++ LI+ ++ G +G+VYCL+R + AA L + I+
Sbjct: 204 FVAGFDRPNIQYRIVPKNNPHKQLLELIRTEHDGDAGVVYCLSRASVEKTAALLVENGID 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ + R Q +++
Sbjct: 264 AVPYHAGMDARTRAANQARFL 284
>gi|326336566|ref|ZP_08202735.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691231|gb|EGD33201.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 730
Score = 76.3 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KN+ ++I +K ++ GQSGI+YCL+RK + +A L I
Sbjct: 204 FKSSFNRPNLYYEVRPKTKNINSDIIRFVK-QHPGQSGIIYCLSRKSVEELAQTLQVNGI 262
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
AI YHAGL K R + Q ++ +V V
Sbjct: 263 TAIPYHAGLDAKTRAKHQDMFLMEEVEV 290
>gi|341891862|gb|EGT47797.1| hypothetical protein CAEBREN_03628 [Caenorhabditis brenneri]
Length = 617
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR+NLKYE++ KK+ +E+ +I ++SGQ+GIVYCL+R +C+ +A L
Sbjct: 272 FRAGFNRSNLKYEVISKKSSDEECAEEIAHVINTQFSGQTGIVYCLSRNDCEKMATLLKT 331
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ I A YHA + ++ WIS K+ V
Sbjct: 332 KGIRAKHYHAYMEPSEKSSSHQNWISGKIQV 362
>gi|241765486|ref|ZP_04763451.1| ATP-dependent DNA helicase RecQ [Acidovorax delafieldii 2AN]
gi|241364740|gb|EER59740.1| ATP-dependent DNA helicase RecQ [Acidovorax delafieldii 2AN]
Length = 618
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I+ KK+ +++ I+ +++G++G+VYC +RK + +AA L I
Sbjct: 203 FISSFDRPNIRYTIVEKKDATTQLLRFIEREHAGEAGVVYCQSRKRVEELAATLCDAGIT 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL K+R + Q +++
Sbjct: 263 ALPYHAGLDTKVRQKNQDRFL 283
>gi|83643067|ref|YP_431502.1| ATP-dependent DNA helicase RecQ [Hahella chejuensis KCTC 2396]
gi|83631110|gb|ABC27077.1| ATP-dependent DNA helicase RecQ [Hahella chejuensis KCTC 2396]
Length = 603
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I K+N ++++ ++A+++ +GIVYCL+R + + VA L +E N
Sbjct: 202 FISGFDRPNIQYRITQKQNARQQLLRFLRAEHANDAGIVYCLSRNKVEQVAEWLRKEGFN 261
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R E Q +++
Sbjct: 262 ALPYHAGLPADVRQEHQQRFL 282
>gi|411004053|ref|ZP_11380382.1| ATP-dependent DNA helicase [Streptomyces globisporus C-1027]
Length = 675
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++S +K +++G +GIVYCL+R + A LA+ I+
Sbjct: 214 FVASFDRPNIQYRIVPKADPKKQLLSFLKEEHAGDAGIVYCLSRNSTEKTAEYLARNGID 273
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 274 AVPYHAGLDAATRAAHQARFL 294
>gi|357441847|ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
gi|355480249|gb|AES61452.1| Bloom syndrome protein-like protein [Medicago truncatula]
Length = 603
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NLKYE++ K K LK++ L+ ++ Q GIVYCL++ EC V+ L ++ +I A
Sbjct: 391 SFDRPNLKYEVIVKTKEPLKQLGQLLMDRFKSQCGIVYCLSKSECVDVSKFLNEKCKIKA 450
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
YHAGLA + R VQ KW +VH+
Sbjct: 451 AYYHAGLAARQRVAVQKKWHDGEVHI 476
>gi|402830902|ref|ZP_10879596.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
gi|402283336|gb|EJU31854.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
Length = 729
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KN+ ++I +K + GQSGI+YCL+RK + +A L I
Sbjct: 203 FKSSFNRPNLYYEVRPKTKNINSDIIRFVKQR-PGQSGIIYCLSRKSVEELAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
AI YHAGL K R + Q ++ +V V
Sbjct: 262 TAIPYHAGLDAKTRAKHQDMFLMEEVEV 289
>gi|297851930|ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
gi|297339688|gb|EFH70105.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
Length = 704
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSG-QSGIVYCLTRKECDSVAAALA 55
F+SS NR NL Y + K K V+ E+ I+ YS +SGIVYC +RKEC+ +A L
Sbjct: 274 FVSSVNRPNLFYSVREKSAVGKVVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLR 333
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ I+A YHA + +R +V M+W NK+ V TV
Sbjct: 334 ERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 370
>gi|22651415|gb|AAL05260.1| QDE3-like protein [Blumeria graminis]
Length = 1632
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 1 FISSFNRANLKYEILPKK-----NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALA 55
F SFNR NL YE+ PK +LKE+ L+ KY GQ+GI+Y L+RK C+ +A L+
Sbjct: 991 FSQSFNRPNLYYEVRPKSGRKMPELLKEIADLVTRKYRGQTGIIYTLSRKGCEDMAKKLS 1050
Query: 56 QE-RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+E I+ YHAG+ + + +V W S K+ V
Sbjct: 1051 KEFNISVHYYHAGMKSEEKTKVTRDWQSGKLQV 1083
>gi|427427005|ref|ZP_18917050.1| ATP-dependent DNA helicase RecQ [Caenispirillum salinarum AK4]
gi|425883706|gb|EKV32381.1| ATP-dependent DNA helicase RecQ [Caenispirillum salinarum AK4]
Length = 600
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N++Y + K N +++S IK ++SG+SGIVYC++R + D +AA L E +
Sbjct: 196 FVAGFDRPNIRYHVRAKTNAKTQLLSFIKREHSGESGIVYCMSRAKVDDIAAWLNDEGVP 255
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++R Q +++ +
Sbjct: 256 ALPYHAGLPKEVRFANQDRFLKEE 279
>gi|30692489|ref|NP_174421.2| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
Short=AtRecQl2
gi|11121445|emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana]
gi|332193225|gb|AEE31346.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 705
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSG-QSGIVYCLTRKECDSVAAALA 55
F+SS NR NL Y + K K V+ E+ I+ YS +SGIVYC +RKEC+ +A L
Sbjct: 275 FVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLR 334
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ I+A YHA + +R +V M+W NK+ V TV
Sbjct: 335 ERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 371
>gi|367477517|ref|ZP_09476866.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. ORS 285]
gi|365270186|emb|CCD89334.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. ORS 285]
Length = 624
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 56/82 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ + I+ ++ G +G+VYCL+R + + AAAL + I
Sbjct: 206 FVASFDRPNIRYEIVDKHNGPAQLKAFIRERHPGDAGVVYCLSRAKVEDTAAALTEAGIT 265
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
AI YHAGL +R+ Q ++I+
Sbjct: 266 AIPYHAGLDPAVRSRNQDRFIN 287
>gi|375255218|ref|YP_005014385.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
gi|363408301|gb|AEW21987.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
Length = 786
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YEI PK K++ +E+I IKA G+SGI+YCL+RK+ + A L I
Sbjct: 260 FKSSFNRANLYYEIRPKGKDIDREIIKYIKAN-EGKSGIIYCLSRKKVEEFADILCANGI 318
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ + R+ Q ++ K V
Sbjct: 319 KALPYHAGMDSQQRSANQDAFLMEKTDV 346
>gi|427722202|ref|YP_007069479.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
gi|427353922|gb|AFY36645.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
Length = 715
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
+SFNR NL YE++PK + + + K+ G+SGI+YC +RK+ D ++ L + INA+
Sbjct: 204 TSFNRPNLYYEVIPKSSRSYDQVLKYTRKHRGKSGIIYCSSRKKVDEISDRLKNDGINAL 263
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG++DK R Q ++I + V V
Sbjct: 264 PYHAGMSDKARASHQDQFIRDDVPV 288
>gi|359406153|ref|ZP_09198865.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
gi|357556705|gb|EHJ38287.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
Length = 723
Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YE+ K N + K++I IK ++ G+SGI+YC++RK+ + +AA L I
Sbjct: 201 FKSSFNRANLYYEVRQKTNDIDKQIIKFIK-QHPGKSGIIYCISRKKVEELAAVLKANDI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL R++ Q ++ ++ V
Sbjct: 260 KAAAYHAGLDSATRSQTQDDFLMERIDV 287
>gi|428320783|ref|YP_007118665.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
gi|428244463|gb|AFZ10249.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
Length = 731
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SFNR NL YE+ PK K+ EV+ +I+ K G SGI+YCL+RK+ + VA L Q I
Sbjct: 211 VASFNRPNLYYEVRPKTKHSFAEVLQIIQKK--GGSGIIYCLSRKKVEEVAYKLQQSGIA 268
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ D R Q ++I + V V
Sbjct: 269 ALPYHAGMNDVDRATNQTRFIRDDVQV 295
>gi|403419682|emb|CCM06382.1| predicted protein [Fibroporia radiculosa]
Length = 1116
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALA-QERINAI 62
S NR NL YEI KK +K+++ I ++S ++GI+YC +RK C+ +A L Q R++A+
Sbjct: 586 SMNRQNLFYEIRSKKGYIKDMVDFIVTQHSNETGIIYCQSRKSCEELAKTLRDQYRLDAL 645
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R +VQ +W + + +
Sbjct: 646 HYHAGMISADRKDVQARWQTGRCKI 670
>gi|456352797|dbj|BAM87242.1| ATP-dependent DNA helicase RecQ [Agromonas oligotrophica S58]
Length = 625
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 55/82 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ + IK ++ G +G+VYCL+R + + AAAL + I
Sbjct: 206 FVASFDRPNIRYEIVDKNNGPAQLKAFIKERHPGDAGVVYCLSRAKVEDTAAALTEAGIT 265
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
AI YHAGL +R Q ++I+
Sbjct: 266 AIPYHAGLDAGVRARNQDRFIN 287
>gi|228473728|ref|ZP_04058475.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
gi|228274840|gb|EEK13658.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
Length = 729
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KN+ ++I +K + GQSGI+YCL+RK + +A L I
Sbjct: 203 FKSSFNRPNLYYEVRPKTKNINSDIIRFVKQR-PGQSGIIYCLSRKSVEELAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
AI YHAGL K R + Q ++ +V V
Sbjct: 262 TAIPYHAGLDAKTRAKHQDMFLMEEVDV 289
>gi|82621731|gb|ABB86547.1| superfamily II DNA helicase, partial [uncultured Bacteroidetes
bacterium 'SBI2-18 P41A3']
Length = 548
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 14/106 (13%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YEI K N+ K++IS IK + G+SGIVYCL+RK + ++ L I
Sbjct: 19 FKSSFNRPNLFYEIRNKTSNINKDIISFIKNR-DGKSGIVYCLSRKNVNELSQTLQVNGI 77
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
NA+ YHAGL K R + Q ++ +ECD + A +A
Sbjct: 78 NALPYHAGLESKTRVKNQDMFL------------MEECDVIVATIA 111
>gi|311104192|ref|YP_003977045.1| ATP-dependent DNA helicase RecQ [Achromobacter xylosoxidans A8]
gi|310758881|gb|ADP14330.1| ATP-dependent DNA helicase RecQ [Achromobacter xylosoxidans A8]
Length = 609
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K V K+++ +I+ + G+SG+VYCL+R + A L + I+
Sbjct: 197 FVSSFDRPNIRYRIIEKNEVRKQLLDMIQTDHEGESGVVYCLSRARVEETAEFLCNQGID 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ ++R Q +++
Sbjct: 257 AMPYHAGLSAQVRAANQSRFL 277
>gi|386856992|ref|YP_006261169.1| DNA helicase RecQ [Deinococcus gobiensis I-0]
gi|380000521|gb|AFD25711.1| DNA helicase RecQ [Deinococcus gobiensis I-0]
Length = 788
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 58/84 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y + K+ +++ I+A+++G +GI+YCL+RK + A L + ++
Sbjct: 203 FVSSFDRPNIQYRVANKEGPKTQLLDFIRAEHAGDAGIIYCLSRKSVEETAKWLQAQGVD 262
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A++YHAGL+ + RN Q ++++ +
Sbjct: 263 AVAYHAGLSPRERNSAQERFLNEE 286
>gi|88803234|ref|ZP_01118760.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
gi|88780800|gb|EAR11979.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
Length = 727
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 14/106 (13%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNRANL YEI PK K V K++I +K + G+SGI+YCL+RK+ + VA L +
Sbjct: 197 FKASFNRANLFYEIRPKTKEVEKDIIRFVKQRV-GKSGIIYCLSRKKVEEVAQILQVNGL 255
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
NA+ YHAGL K R Q ++ ++CD V A +A
Sbjct: 256 NAVPYHAGLDAKTRVRHQDMFL------------MEDCDIVVATIA 289
>gi|403364021|gb|EJY81760.1| ATP-dependent DNA helicase, RecQ family protein [Oxytricha
trifallax]
Length = 923
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIK-AKYSGQSGIVYCLTRKECDSVAAALA 55
F SSFNR NL YEI K KN+ +++I L++ KY QSGI+YCL+R EC+ + L+
Sbjct: 536 FQSSFNRPNLLYEIRDKAKIKKNIAEDIIMLLRDRKYVYQSGIIYCLSRTECEELCRELS 595
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ + YHA + + R +Q +W+ N++H+
Sbjct: 596 EFDVKCDYYHAKMNENERRIIQQRWMRNEIHI 627
>gi|374385551|ref|ZP_09643054.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
gi|373225253|gb|EHP47587.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
Length = 735
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PK + K++I IK K+ G+SGI+YCL+RK+ + +A L I
Sbjct: 212 FKSSFNRPNLYYEVRPKNDPTKDIIKFIK-KHEGKSGIIYCLSRKKVEELAEVLCINGIK 270
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R+ Q K++ +V V
Sbjct: 271 AAPYHAGMDATTRSANQDKFLMEEVDV 297
>gi|357406115|ref|YP_004918039.1| ATP-dependent DNA helicase RecQ [Methylomicrobium alcaliphilum 20Z]
gi|351718780|emb|CCE24454.1| ATP-dependent DNA helicase RecQ [Methylomicrobium alcaliphilum 20Z]
Length = 711
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K+N ++++ I++++ G +GIVYCL+RK+ +S A L + I
Sbjct: 196 FVSSFDRPNIRYRIVQKQNARQQLLQFIQSEHFGDAGIVYCLSRKKVESTAEWLQSKGIR 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ + R + Q +++
Sbjct: 256 ALPYHAGMDNAARQQHQHRFL 276
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER-INA 61
SSFNR NL YEI PKK+V E+ I QSGI+YCL+R C+ VAA L E + A
Sbjct: 671 SSFNRPNLYYEIKPKKDVFAEMHRFISNGRLDQSGIIYCLSRTSCEQVAAKLRNEYGLKA 730
Query: 62 ISYHAGLADKLRNEVQMKW 80
YHAGL R +Q W
Sbjct: 731 WHYHAGLDKAERQRIQSSW 749
>gi|6692125|gb|AAF24590.1|AC007654_6 T19E23.16 [Arabidopsis thaliana]
Length = 849
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSG-QSGIVYCLTRKECDSVAAALA 55
F+SS NR NL Y + K K V+ E+ I+ YS +SGIVYC +RKEC+ +A L
Sbjct: 322 FVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLR 381
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ I+A YHA + +R +V M+W NK+ V TV
Sbjct: 382 ERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 418
>gi|237747447|ref|ZP_04577927.1| ATP-dependent DNA helicase [Oxalobacter formigenes HOxBLS]
gi|229378798|gb|EEO28889.1| ATP-dependent DNA helicase [Oxalobacter formigenes HOxBLS]
Length = 614
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I+ K+N ++++ I + + G +GIVYCL+R++ + + L ++ I+
Sbjct: 205 FISSFDRPNIRYCIVEKENPRRQLLDFILSGHRGDAGIVYCLSRRKVEETVSFLTEQGIS 264
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R E Q +++
Sbjct: 265 ALPYHAGLGHAVRTENQARFL 285
>gi|357059803|ref|ZP_09120582.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
gi|355377445|gb|EHG24664.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
Length = 726
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YE+ PK K + KE+++ I+ +G+SGI+YCL+RK D +A L I
Sbjct: 201 FKSSFNRANLYYEVRPKTKEINKEIVTFIRQN-AGKSGIIYCLSRKTVDELAKVLQANEI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ + V
Sbjct: 260 KAKPYHAGLEPDERSQTQDLFLMQDIDV 287
>gi|410663371|ref|YP_006915742.1| ATP-dependent DNA helicase RecQ [Simiduia agarivorans SA1 = DSM
21679]
gi|409025728|gb|AFU98012.1| ATP-dependent DNA helicase RecQ [Simiduia agarivorans SA1 = DSM
21679]
Length = 705
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI F+R N++Y I PK N K+++ ++ ++ SGIVYCL+RK+ + +A+ L E N
Sbjct: 196 FIVGFDRPNIQYRITPKNNPKKQLVQFLRNEHPEDSGIVYCLSRKKTEEIASHLQSEGFN 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 256 ALPYHAGLPAEVRASNQARFL 276
>gi|145324100|ref|NP_001077639.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|332193226|gb|AEE31347.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 580
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSG-QSGIVYCLTRKECDSVAAALA 55
F+SS NR NL Y + K K V+ E+ I+ YS +SGIVYC +RKEC+ +A L
Sbjct: 150 FVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLR 209
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ I+A YHA + +R +V M+W NK+ V
Sbjct: 210 ERGISADYYHADMDANMREKVHMRWSKNKLQV 241
>gi|336177472|ref|YP_004582847.1| ATP-dependent DNA helicase RecQ [Frankia symbiont of Datisca
glomerata]
gi|334858452|gb|AEH08926.1| ATP-dependent DNA helicase RecQ [Frankia symbiont of Datisca
glomerata]
Length = 635
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N++Y I+PKK+ ++++L++A+++G +GIVYCL+R + +A L +
Sbjct: 220 FVADFDRPNIQYRIVPKKDPKAQLLTLLRAEHTGDAGIVYCLSRSSVEKIAEFLVANGVA 279
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R E Q +++
Sbjct: 280 ALPYHAGLDARARAEHQARFL 300
>gi|56603560|dbj|BAD80740.1| DNA helicase [Lentinula edodes]
Length = 945
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL Y IL KK +L ++ S I K+ G++GI+YCL R +C+ VA L Q+ +
Sbjct: 586 FQQSFNRVNLNYLILDKKAKILDDIYSFINTKHRGETGIIYCLGRDKCEKVAGQLRQKGL 645
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A +HA ++ + +V +W S+++ +
Sbjct: 646 KARHFHAQMSTTDKEQVLQEWQSDRIQI 673
>gi|408374557|ref|ZP_11172242.1| ATP-dependent DNA helicase RecQ [Alcanivorax hongdengensis A-11-3]
gi|407765515|gb|EKF73967.1| ATP-dependent DNA helicase RecQ [Alcanivorax hongdengensis A-11-3]
Length = 712
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I K +++ L++ ++SG++GIVYCL+R + + VA L Q+ IN
Sbjct: 196 FVSSFDRPNIQYRIERKDGARNQLLRLLRTEHSGEAGIVYCLSRNKVERVADWLCQQGIN 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R + Q +++
Sbjct: 256 ALPYHAGLPAGTREKNQQRFL 276
>gi|440298813|gb|ELP91444.1| DNA helicase hus2, putative [Entamoeba invadens IP1]
Length = 1361
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL+Y + PK KNV+ ++ LIK KY QSGIVYCL+RK V L I
Sbjct: 822 FTQSFNRKNLRYCVKPKTKNVIDDIEKLIKTKYRNQSGIVYCLSRKNTKDVCDQLVARGI 881
Query: 60 NAISYHAGLADKLRNEVQMKW 80
A YHA L + R + Q W
Sbjct: 882 KACFYHAELTPEERQKAQRGW 902
>gi|381163181|ref|ZP_09872411.1| ATP-dependent DNA helicase RecQ [Saccharomonospora azurea NA-128]
gi|379255086|gb|EHY89012.1| ATP-dependent DNA helicase RecQ [Saccharomonospora azurea NA-128]
Length = 610
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PK++ K+++ ++ +++G +GIVYCL+R+ + A L + I+
Sbjct: 197 FVSSFDRPNIQYRIIPKRDPRKQLLDFLRTEHAGDAGIVYCLSRRSVEETAEFLTRNGID 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 ALPYHAGLDADTRARHQARFL 277
>gi|171687593|ref|XP_001908737.1| hypothetical protein [Podospora anserina S mat+]
gi|170943758|emb|CAP69410.1| unnamed protein product [Podospora anserina S mat+]
Length = 1692
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVI-SLIKAKYSGQSGIVYCLTRKECDSVAAALAQER- 58
F SFNR NL YE+ PK + + SLI +Y Q+GI+Y +R C+ +A L ++
Sbjct: 1020 FTQSFNRPNLYYEVFPKPPTYVDPLGSLIATRYKNQTGIIYTTSRASCEGIAGKLVEKYG 1079
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL D R E+Q KW +++HV
Sbjct: 1080 IKAAPYHAGLDD--RPEIQRKWQDDEIHV 1106
>gi|453048661|gb|EME96340.1| ATP-dependent DNA helicase [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 641
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K ++++ LI+ +++G +G+VYCL+RK + AA L +E +
Sbjct: 210 FVASFDRPNIQYRIVQKNEPRRQLLELIRGEHAGDAGVVYCLSRKSVEDTAAFLVREGVE 269
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 270 ALPYHAGLDARVRAANQARFL 290
>gi|217969471|ref|YP_002354705.1| ATP-dependent DNA helicase RecQ [Thauera sp. MZ1T]
gi|217506798|gb|ACK53809.1| ATP-dependent DNA helicase RecQ [Thauera sp. MZ1T]
Length = 657
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K + ++++ I+ + GQ+GIVYCL+R++ + AA L ++ +
Sbjct: 253 FVSSFDRPNIRYTIVEKNDPRRQLLDFIREECPGQAGIVYCLSRRKVEETAAWLQEQGLA 312
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ ++R E Q +++
Sbjct: 313 ALPYHAGMTQEIRAEHQSRFL 333
>gi|134095872|ref|YP_001100947.1| ATP-dependent DNA helicase [Herminiimonas arsenicoxydans]
gi|133739775|emb|CAL62826.1| ATP-dependent DNA helicase RecQ [Herminiimonas arsenicoxydans]
Length = 608
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 58/81 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+V+ I+++++G +GIVYCL+RK+ + A L + I+
Sbjct: 203 FVSSFDRPNIRYQIVEKANGRKQVLDFIESEHAGDAGIVYCLSRKKVEETAEFLRENGIS 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ R++ Q +++
Sbjct: 263 ALPYHAGMDFATRSKNQARFL 283
>gi|295133000|ref|YP_003583676.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981015|gb|ADF51480.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 731
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK KNV ++I +K + +G+SGI+YCL+RK+ + +A L I
Sbjct: 203 FKASFNRPNLYYEVRPKTKNVDADIIRFVK-QNNGKSGIIYCLSRKKVEELAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NAI YHAGL K R++ Q ++ +V V
Sbjct: 262 NAIPYHAGLDAKTRSKHQDMFLMEEVDV 289
>gi|334348257|ref|XP_001365384.2| PREDICTED: ATP-dependent DNA helicase Q1 [Monodelphis domestica]
Length = 655
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++V+ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDVVKLINGRYKGQSGIIYCFSQKDSEQVTISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + K + +V W +NK+ V TV
Sbjct: 337 LGIQAGAYHANMEPKDKTKVHKNWSANKIQVVVATV 372
>gi|404379202|ref|ZP_10984268.1| ATP-dependent DNA helicase RecQ [Simonsiella muelleri ATCC 29453]
gi|294483547|gb|EFG31232.1| ATP-dependent DNA helicase RecQ [Simonsiella muelleri ATCC 29453]
Length = 602
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y+++ K N K+++ IK + Q+GI+YCL+RK + VA L + +N
Sbjct: 197 FVSSFDRPNIYYQVIEKHNGKKQLLDFIKKQMHCQNGIIYCLSRKSVEDVAEFLCENGLN 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAGL+ ++R + Q ++
Sbjct: 257 ALPYHAGLSLEIRQQNQYRF 276
>gi|319942147|ref|ZP_08016465.1| ATP-dependent DNA helicase RecQ [Sutterella wadsworthensis 3_1_45B]
gi|319804357|gb|EFW01241.1| ATP-dependent DNA helicase RecQ [Sutterella wadsworthensis 3_1_45B]
Length = 609
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y I+ KKNV ++ IK ++ G+ G+VYC+ R+ C+S+ L + I+
Sbjct: 197 FVASFDRPNIFYRIVDKKNVRSQLAQFIKTEHPGECGVVYCIARQTCESICEYLCSKGIH 256
Query: 61 AISYHAGLADKLRNE 75
A+ YHAGL+++ R E
Sbjct: 257 ALFYHAGLSNEERAE 271
>gi|325001220|ref|ZP_08122332.1| ATP-dependent DNA helicase RecQ [Pseudonocardia sp. P1]
Length = 648
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 55/83 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK K+++ L+++++ G +GIVYCL+RK + A L + I
Sbjct: 236 FVASFDRPNIRYRIAPKNEPRKQLLDLLRSEHPGDAGIVYCLSRKSVEQTAEFLGSQGIA 295
Query: 61 AISYHAGLADKLRNEVQMKWISN 83
A+ YHAGL ++R Q +++ +
Sbjct: 296 ALPYHAGLDAEVRRRNQSRFLRD 318
>gi|302653064|ref|XP_003018365.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
gi|291182004|gb|EFE37720.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
Length = 1341
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K ++ LK++ LI Y + GI+YCL+RK C+ VA L+ +
Sbjct: 897 FTQSFNRPNLTYEVRKKGRAQDALKDIADLITNDYPDKCGIIYCLSRKTCERVAMQLSSK 956
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAGL+ K R VQ W S K +V
Sbjct: 957 FGVKAAHYHAGLSSKDRFTVQRDWQSGKHNV 987
>gi|302509478|ref|XP_003016699.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
gi|291180269|gb|EFE36054.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
Length = 1441
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K ++ LK++ LI Y + GI+YCL+RK C+ VA L+ +
Sbjct: 868 FTQSFNRPNLTYEVRKKGRAQDALKDIADLITNDYPDKCGIIYCLSRKTCERVAMQLSSK 927
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAGL+ K R VQ W S K +V
Sbjct: 928 FGVKAAHYHAGLSSKDRFTVQRDWQSGKHNV 958
>gi|440636643|gb|ELR06562.1| hypothetical protein GMDG_08035 [Geomyces destructans 20631-21]
Length = 1823
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
+ SFNR NL YE+ PK + ++K ++ +I KY GQ+GI+Y L+RK C+ VA L+
Sbjct: 1074 YTQSFNRPNLTYEVRPKPKHEELMKSIVEIITKKYKGQTGIIYALSRKNCEKVADELSTR 1133
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTVV 93
I A YHA L + VQ W G W V+
Sbjct: 1134 YNIKACHYHAALKPIEKKRVQQDW-----QAGKWQVI 1165
>gi|395538504|ref|XP_003771219.1| PREDICTED: ATP-dependent DNA helicase Q1 [Sarcophilus harrisii]
Length = 780
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPKK----NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K + +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 403 FTASFNRPNLYYEVRQKPSNTDDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQK 462
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + V KW +NK+ V TV
Sbjct: 463 LGIQAGAYHANMEPRDKTAVHKKWSANKIQVVVATV 498
>gi|56477822|ref|YP_159411.1| ATP-dependent DNA helicase protein [Aromatoleum aromaticum EbN1]
gi|56313865|emb|CAI08510.1| ATP-dependent DNA helicase protein [Aromatoleum aromaticum EbN1]
Length = 610
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K N ++++ I+ ++G++GIVYCL+R++ + AA L ++ I
Sbjct: 208 FVSSFDRPNIRYRMVDKDNPRAQLLAFIRDDHAGEAGIVYCLSRRKVEETAAWLGEQGIR 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+A + R Q +++
Sbjct: 268 ALPYHAGMAQETRAAHQSRFL 288
>gi|350570086|ref|ZP_08938457.1| ATP-dependent helicase RecQ [Neisseria wadsworthii 9715]
gi|349797371|gb|EGZ51135.1| ATP-dependent helicase RecQ [Neisseria wadsworthii 9715]
Length = 610
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI+SF+R N++Y+++ K N K+++ I G+SGIVYCL+RK + A L+ +N
Sbjct: 199 FIASFDRPNIRYQVVEKNNGKKQLLDFILKDMQGESGIVYCLSRKSVEDTAEFLSSHGLN 258
Query: 61 AISYHAGLADKLRNEVQMKW 80
AI YHAGL+ + R + Q ++
Sbjct: 259 AIPYHAGLSMETRTQNQRRF 278
>gi|407042405|gb|EKE41307.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 1173
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL Y + PK K V+ E+ +IK KY GQSGI+YCL++K +A L + I
Sbjct: 641 FSQSFNRKNLTYCVRPKTKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDIAQELNKRGI 700
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAG+ K R VQ +W + +V
Sbjct: 701 KSKYYHAGMDTKERTTVQKEWCDGEFNV 728
>gi|326471382|gb|EGD95391.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1556
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K ++ LK++ LI Y + GI+YCL+RK C+ VA L+ +
Sbjct: 897 FTQSFNRPNLTYEVRKKGRAQDALKDIADLITNDYPDKCGIIYCLSRKTCERVAMQLSSK 956
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAGL+ K R VQ W S K +V
Sbjct: 957 FGVKAAHYHAGLSSKDRFTVQRDWQSGKHNV 987
>gi|449704341|gb|EMD44603.1| ATP-dependent helicase SGS1, putative [Entamoeba histolytica KU27]
Length = 1170
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL Y + PK K V+ E+ +IK KY GQSGI+YCL++K +A L + I
Sbjct: 638 FSQSFNRKNLTYCVRPKTKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDIAQELNKRGI 697
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAG+ K R VQ +W + +V
Sbjct: 698 KSKYYHAGMDTKERTTVQKEWCDGEFNV 725
>gi|403369477|gb|EJY84584.1| hypothetical protein OXYTRI_17569 [Oxytricha trifallax]
Length = 1341
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YEI KK NV ++++++++ ++ G+ GI+YC++RKEC ++ L +
Sbjct: 455 FQSSFNRTNLLYEIRDKKQFKNVTEDIVNMLRTRFKGKCGIIYCISRKECQKLSEILKRN 514
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I YHA ++ R ++Q +W+ N++ +
Sbjct: 515 YHIKCDYYHAEVSYNQRKDIQERWMKNEIQI 545
>gi|390343347|ref|XP_786769.3| PREDICTED: ATP-dependent DNA helicase Q1 [Strongylocentrotus
purpuratus]
Length = 980
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR NL YE+ PK + ++E+I LI ++ GQSGI+YC +RK+ +++A L +
Sbjct: 286 FRAGFNRPNLFYEVRPKPSKQAEFVEELIKLINGEFKGQSGIIYCFSRKDTETMAENLKK 345
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA L + R++V W N + V
Sbjct: 346 GGIQAHPYHAMLDAQYRSQVHRNWKENNIQV 376
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK + SGIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKG--SGIVYCISRKTVDQVAEQLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ D+ R++ Q ++I + V +
Sbjct: 261 ALPYHAGMEDRERSQNQTRFIRDDVQI 287
>gi|300728338|ref|ZP_07061703.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
gi|299774403|gb|EFI71030.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
Length = 726
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK K+V K++I IK ++ G+SGI+YCL RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTKDVDKQIIMFIK-QHPGKSGIIYCLARKKVEELAEILKANDI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL R++ Q ++ + V
Sbjct: 260 KAAAYHAGLDSSTRSKTQDDFLMENIDV 287
>gi|332285261|ref|YP_004417172.1| DNA helicase [Pusillimonas sp. T7-7]
gi|330429214|gb|AEC20548.1| DNA helicase [Pusillimonas sp. T7-7]
Length = 605
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V +++++ IKA++ G GIVYCL+R + A L Q I
Sbjct: 196 FVASFDRPNIRYRIIEKNEVRRQLLAFIKAEHEGDCGIVYCLSRARVEETADFLCQNGIE 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R+ Q +++
Sbjct: 256 ALPYHAGLNASVRSANQARFL 276
>gi|296130813|ref|YP_003638063.1| ATP-dependent DNA helicase RecQ [Cellulomonas flavigena DSM 20109]
gi|296022628|gb|ADG75864.1| ATP-dependent DNA helicase RecQ [Cellulomonas flavigena DSM 20109]
Length = 693
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK N +++ L++ ++ G SGIVYCL+R + A AL I+
Sbjct: 283 FVASFDRPNIRYRIVPKDNPRAQLLHLLRTEHDGDSGIVYCLSRASVEQTAEALRDAGID 342
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 343 ALPYHAGLERGVRAANQSRFL 363
>gi|67469885|ref|XP_650914.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467579|gb|EAL45525.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1182
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL Y + PK K V+ E+ +IK KY GQSGI+YCL++K +A L + I
Sbjct: 650 FSQSFNRKNLTYCVRPKTKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDIAQELNKRGI 709
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAG+ K R VQ +W + +V
Sbjct: 710 KSKYYHAGMDTKERTTVQKEWCDGEFNV 737
>gi|57106919|ref|XP_543768.1| PREDICTED: ATP-dependent DNA helicase Q1 [Canis lupus familiaris]
Length = 646
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YEI K ++V+++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEIRQKPSNTEDVIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + V +W +N++ V TV
Sbjct: 337 LGIQAGAYHANMEPEDKTRVHRRWSANEIQVVVATV 372
>gi|226941686|ref|YP_002796760.1| RecQ [Laribacter hongkongensis HLHK9]
gi|226716613|gb|ACO75751.1| RecQ [Laribacter hongkongensis HLHK9]
Length = 606
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y ++ K ++++ I+ +++G SGIVYCL+RK + AA L + I+
Sbjct: 202 FLSSFDRPNISYAVVEKHQAKQQLLRFIRQEHAGHSGIVYCLSRKRVEDTAAFLRENGID 261
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG + R Q ++I
Sbjct: 262 AMAYHAGFDARTREATQTRFI 282
>gi|91978870|ref|YP_571529.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisB5]
gi|91685326|gb|ABE41628.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisB5]
Length = 619
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 54/82 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K+N ++ + I K++G SG+VYCL+R + + AAAL + I
Sbjct: 207 FVSSFDRPNIRYTIVDKQNAPAQLKAFIADKHTGHSGVVYCLSRAKVEDTAAALCKAGIT 266
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL R Q ++I+
Sbjct: 267 ALPYHAGLPAGTRAANQDRFIN 288
>gi|443625229|ref|ZP_21109677.1| putative ATP-dependent DNA helicase RecQ [Streptomyces
viridochromogenes Tue57]
gi|443341146|gb|ELS55340.1| putative ATP-dependent DNA helicase RecQ [Streptomyces
viridochromogenes Tue57]
Length = 695
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++S ++ +++G +GIVYCL+RK ++ A L++ I
Sbjct: 226 FVASFDRPNIQYRIVPKADPKKQLLSFLREEHAGDAGIVYCLSRKSVEATAEFLSRNGIE 285
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 286 AVPYHAGLDAGTRAAHQSRFL 306
>gi|452853054|ref|YP_007494738.1| ATP-dependent DNA helicase recQ [Desulfovibrio piezophilus]
gi|451896708|emb|CCH49587.1| ATP-dependent DNA helicase recQ [Desulfovibrio piezophilus]
Length = 741
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F + F+R N+ Y ILPK N K ++ I+ +SG +GIVY L+RK+ D AA L ++ +N
Sbjct: 204 FATGFDRPNISYTILPKNNGRKMLLRFIEENHSGDAGIVYRLSRKKVDKTAAFLKEKGLN 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ + R++ Q +++
Sbjct: 264 ALPYHAGLSPRERHDNQERFM 284
>gi|345885011|ref|ZP_08836404.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
gi|345042066|gb|EGW46174.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
Length = 727
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKK + K++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKKSDDDTNKQIIKFIK-QHAGKSGIIYCLSRKKVEELAAILKAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ ++ +
Sbjct: 260 DIKAAPYHAGLDSETRSKAQDDFLMEELDI 289
>gi|342865489|gb|EGU71814.1| hypothetical protein FOXB_17670 [Fusarium oxysporum Fo5176]
Length = 1563
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K + E+ SLI +KY+ QSGIVY ++RK + VA +L+ +
Sbjct: 1000 FSQSFNRPNLHYEVRGKTTNAKCMDEIASLIMSKYANQSGIVYTVSRKNAEKVAESLSIQ 1059
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + + EVQ W +V +
Sbjct: 1060 GITARHYHAGLDPQEKVEVQTSWQQGQVKI 1089
>gi|296121484|ref|YP_003629262.1| ATP-dependent DNA helicase RecQ [Planctomyces limnophilus DSM 3776]
gi|296013824|gb|ADG67063.1| ATP-dependent DNA helicase RecQ [Planctomyces limnophilus DSM 3776]
Length = 779
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 2 ISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
+ SF+R NL Y ++P+++ ++VIS I+ ++ G+SG+VYCL RK+ D V L Q A
Sbjct: 245 VGSFDRPNLIYRVIPREDRDQQVISTIR-RHPGESGVVYCLRRKDVDDVTTMLKQAGFRA 303
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL D+ R+ Q ++++ V +
Sbjct: 304 LPYHAGLPDEERHANQHAFLNDHVEI 329
>gi|255037353|ref|YP_003087974.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950109|gb|ACT94809.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 737
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PKK+V K++I I+ G+SGIVYCL+RK + VA L +
Sbjct: 204 FKSSFNRKNLYYEIRPKKDVKKQLIRYIRNN-KGKSGIVYCLSRKTVEEVAELLNVNDVR 262
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL R Q ++ ++ECD + A +A
Sbjct: 263 ALPYHAGLDANTRMANQDAFL------------NEECDVIVATIA 295
>gi|327303226|ref|XP_003236305.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326461647|gb|EGD87100.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1556
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K ++ LK++ LI Y + GI+YCL+RK C+ VA L+ +
Sbjct: 897 FTQSFNRPNLTYEVRKKGRAQDALKDIADLITNDYPEKCGIIYCLSRKTCERVAMQLSSK 956
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAGL+ K R VQ W S K +V
Sbjct: 957 FGVKAAHYHAGLSSKDRFTVQRDWQSGKHNV 987
>gi|152980056|ref|YP_001354619.1| ATP-dependent DNA helicase [Janthinobacterium sp. Marseille]
gi|151280133|gb|ABR88543.1| ATP-dependent DNA helicase [Janthinobacterium sp. Marseille]
Length = 607
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+V+ I++++ G +GIVYCL+RK+ + A L + I
Sbjct: 201 FVSSFDRPNIRYQIVEKANGRKQVLDFIESEHPGDAGIVYCLSRKKVEETAEFLNENGIT 260
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ R++ Q +++
Sbjct: 261 ALPYHAGMEFATRSKNQARFL 281
>gi|326479495|gb|EGE03505.1| RecQ family helicase MusN [Trichophyton equinum CBS 127.97]
Length = 1531
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K ++ LK++ LI Y + GI+YCL+RK C+ VA L+ +
Sbjct: 866 FTQSFNRPNLTYEVRKKGRAQDALKDIADLITNDYPDKCGIIYCLSRKTCERVAMQLSSK 925
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAGL+ K R VQ W S K +V
Sbjct: 926 FGVKAAHYHAGLSSKDRFTVQRDWQSGKHNV 956
>gi|403738783|ref|ZP_10951384.1| ATP-dependent DNA helicase RecQ [Austwickia chelonae NBRC 105200]
gi|403191433|dbj|GAB78154.1| ATP-dependent DNA helicase RecQ [Austwickia chelonae NBRC 105200]
Length = 643
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+S F+R N++Y I PK ++++LI+ +++G+SGIVYCL+RK + A L ++ +
Sbjct: 216 FVSCFDRPNIQYRIEPKDRPRDQLLTLIRTEHAGESGIVYCLSRKSVEQTATWLVEQGVP 275
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R + Q +++
Sbjct: 276 AVPYHAGLDVSVRRDHQERFL 296
>gi|343429696|emb|CBQ73268.1| related to SGS1-DNA helicase [Sporisorium reilianum SRZ2]
Length = 1258
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEIL--PKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
SSFNR NL+Y++ P+ + ++ S I A + + GIVYCL+R+ C++VAA L + I+
Sbjct: 542 SSFNRPNLEYQVRSKPRSKAVDDIASFILASHKDECGIVYCLSRETCETVAADLIKHGIS 601
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHA L R VQ KW SN+ V
Sbjct: 602 AHHYHARLQKDDRAMVQDKWQSNEFKV 628
>gi|373111502|ref|ZP_09525757.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|423131855|ref|ZP_17119530.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|423135590|ref|ZP_17123236.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|423330145|ref|ZP_17307945.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
gi|371640169|gb|EHO05774.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|371640694|gb|EHO06290.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|371640856|gb|EHO06450.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|404602617|gb|EKB02313.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
Length = 731
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YEI PK KNV ++I IK ++ G+SG++YCL+RK+ + +A L I
Sbjct: 202 FKASFNRPNLFYEIRPKTKNVETDIIRFIK-QHQGKSGVIYCLSRKKVEEIANVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|349576041|ref|ZP_08887936.1| ATP-dependent helicase RecQ [Neisseria shayeganii 871]
gi|348012430|gb|EGY51382.1| ATP-dependent helicase RecQ [Neisseria shayeganii 871]
Length = 602
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 57/80 (71%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R NL Y+++ K N K+++ + ++ G+SGIVYCL+RK+ + VAA L + +
Sbjct: 198 FVASFDRPNLYYQVIEKNNGKKQLLDFLNSRPRGESGIVYCLSRKKVEDVAAFLRESGHH 257
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAGL+ + R+E Q ++
Sbjct: 258 ALPYHAGLSMETRSEHQRRF 277
>gi|383780266|ref|YP_005464832.1| putative ATP-dependent DNA helicase [Actinoplanes missouriensis
431]
gi|381373498|dbj|BAL90316.1| putative ATP-dependent DNA helicase [Actinoplanes missouriensis
431]
Length = 632
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SF+R N++Y I+PK + K+++ L++ +++G SGIVYCL+R + A L+Q I
Sbjct: 208 FTASFDRPNIQYRIVPKNSPSKQLLDLLRTEHAGHSGIVYCLSRASVEKHAEFLSQNGIP 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R + Q +++
Sbjct: 268 ALPYHAGLDSRTRFQNQARFL 288
>gi|301631087|ref|XP_002944639.1| PREDICTED: ATP-dependent DNA helicase recQ-like, partial [Xenopus
(Silurana) tropicalis]
Length = 954
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I KK L +++ I+ ++ G +G+VYC +RK + +A ALAQ I+
Sbjct: 247 FLSSFDRPNIRYRIEEKKEPLAQLLRFIEREHPGDAGVVYCQSRKRVEEMAEALAQAGID 306
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 307 ALPYHAGLPADMRQAHQDRFL 327
>gi|355564072|gb|EHH20572.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
gi|355785959|gb|EHH66142.1| ATP-dependent DNA helicase Q1, partial [Macaca fascicularis]
Length = 647
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR+NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 275 FTASFNRSNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 334
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 335 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 370
>gi|282896865|ref|ZP_06304871.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
gi|281198274|gb|EFA73164.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
Length = 719
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK +N E++ +IK K G SGI+YCLTRK D + L +I
Sbjct: 202 IASFNRQNLYYEVRPKNRNSYGEILEIIK-KNEG-SGIIYCLTRKNVDELTLKLQNSQIA 259
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAGL D+ R + Q ++I + V + T+
Sbjct: 260 ALPYHAGLVDQERAKNQTRFIRDDVRIMVATI 291
>gi|307566216|ref|ZP_07628664.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
gi|307345074|gb|EFN90463.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
Length = 727
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ KKN K++I IK ++SG+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRFKKNEDDTNKQIIRFIK-QHSGKSGIIYCLSRKKVEELAAILIAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A +YHAGL + R++ Q +++ + V
Sbjct: 260 DIKAAAYHAGLDSETRSKTQDQFLMEDIDV 289
>gi|383450034|ref|YP_005356755.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
gi|380501656|emb|CCG52698.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
Length = 731
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK KNV ++I IK ++ G+SG++YCL+RK+ + +A L I
Sbjct: 202 FKASFNRPNLYYEVRPKTKNVEADIIRFIK-QHKGKSGVIYCLSRKKVEEIAQVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVEV 288
>gi|425778070|gb|EKV16215.1| RecQ family helicase MusN [Penicillium digitatum Pd1]
gi|425780607|gb|EKV18613.1| RecQ family helicase MusN [Penicillium digitatum PHI26]
Length = 1426
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK-KN--VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQ 56
F+ SFNR NL YE+ K KN VL + I + Y Q GI+YCL+RK C+ A L +
Sbjct: 764 FLQSFNRPNLTYEVRSKGKNDEVLASMAETISSSYRNQCGIIYCLSRKTCEKTAEDLRTK 823
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
R+ A +YHAG++ + E Q W +VH+
Sbjct: 824 YRLKAQAYHAGMSATAKTEAQRNWQMGRVHI 854
>gi|395010047|ref|ZP_10393465.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. CF316]
gi|394311908|gb|EJE49195.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. CF316]
Length = 620
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I+ KK+ +++ I+ +++G++G+VYC +RK + +A+ L+ +
Sbjct: 205 FISSFDRPNIRYTIVEKKDATTQLLRFIEREHAGEAGVVYCQSRKRVEELASTLSDAGLT 264
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL K+R + Q +++
Sbjct: 265 ALPYHAGLDTKVRQKNQDRFL 285
>gi|297261947|ref|XP_002798535.1| PREDICTED: ATP-dependent DNA helicase Q1 isoform 2 [Macaca mulatta]
gi|297261949|ref|XP_001094207.2| PREDICTED: ATP-dependent DNA helicase Q1 isoform 1 [Macaca mulatta]
Length = 649
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR+NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRSNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|300309830|ref|YP_003773922.1| ATP-dependent DNA helicase [Herbaspirillum seropedicae SmR1]
gi|300072615|gb|ADJ62014.1| ATP-dependent DNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 618
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ IK+++ +GIVYCL+RK+ + A L E IN
Sbjct: 208 FVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPEDAGIVYCLSRKKVEETADFLRSEGIN 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ R Q +++
Sbjct: 268 ALAYHAGMDYAQRTANQARFL 288
>gi|288803880|ref|ZP_06409305.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
gi|288333645|gb|EFC72095.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
Length = 727
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKK + K++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKKSDDDTNKQIIKFIK-QHTGKSGIIYCLSRKKVEELAAILQAN 259
Query: 58 RINAISYHAGLADKLRNEVQ 77
I A YHAGL + R++ Q
Sbjct: 260 DIKAAPYHAGLDSETRSKTQ 279
>gi|302540240|ref|ZP_07292582.1| ATP-dependent DNA helicase RecQ [Streptomyces hygroscopicus ATCC
53653]
gi|302457858|gb|EFL20951.1| ATP-dependent DNA helicase RecQ [Streptomyces himastatinicus ATCC
53653]
Length = 621
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK K+++ L++ ++ G +GIVYCL+R + A L I+
Sbjct: 210 FVASFDRPNIQYRIAPKNEPKKQLLELLRTEHPGDAGIVYCLSRASVEKTAEFLVSNGID 269
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R E Q +++
Sbjct: 270 AVPYHAGLDAQVRAENQARFL 290
>gi|302345889|ref|YP_003814242.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
gi|302148973|gb|ADK95235.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
Length = 727
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKK + K++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKKSDDDTNKQIIKFIK-QHTGKSGIIYCLSRKKVEELAAILQAN 259
Query: 58 RINAISYHAGLADKLRNEVQ 77
I A YHAGL + R++ Q
Sbjct: 260 DIKAAPYHAGLDSETRSKTQ 279
>gi|425734558|ref|ZP_18852876.1| ATP-dependent DNA helicase RecQ [Brevibacterium casei S18]
gi|425481172|gb|EKU48333.1| ATP-dependent DNA helicase RecQ [Brevibacterium casei S18]
Length = 610
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y I PK + ++++ I ++ G SGIVYCL+R+ + VA AL I
Sbjct: 200 FVASFDRPNITYRIEPKSSARSQLLNFITTEHPGDSGIVYCLSRRGVEQVAEALVARGIP 259
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R E Q +++
Sbjct: 260 ALPYHAGLPADVRAEHQARFL 280
>gi|371777407|ref|ZP_09483729.1| ATP-dependent DNA helicase [Anaerophaga sp. HS1]
Length = 726
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PK N +E+I ++K G+S I+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKVNATREIIKILKDN-PGKSAIIYCLSRKKVEELAETLVVNGIK 259
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAG+ R++ Q K++ ++ V
Sbjct: 260 ALAYHAGMDAATRSKNQDKFLMEEIDV 286
>gi|94312259|ref|YP_585469.1| ATP-dependent DNA helicase [Cupriavidus metallidurans CH34]
gi|93356111|gb|ABF10200.1| ATP-dependent DNA helicase [Cupriavidus metallidurans CH34]
Length = 630
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSG-----QSGIVYCLTRKECDSVAAALA 55
FISSF+R N++Y I+ K N +++++ IKA++ SGIVYCL+RK+ + AA L+
Sbjct: 214 FISSFDRPNIRYRIIEKDNARQQLLAFIKAEHMNATGGHDSGIVYCLSRKKVEDTAAWLS 273
Query: 56 QERINAISYHAGLADKLRNEVQMKW 80
INA+ YHAG+ ++R Q ++
Sbjct: 274 SHGINALGYHAGMDSQIRQTHQARF 298
>gi|380798559|gb|AFE71155.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
Length = 645
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR+NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 273 FTASFNRSNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 332
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 333 LGIHAGAYHANLEPEDKTAVHRKWSANEIQVVVATV 368
>gi|156844324|ref|XP_001645225.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156115884|gb|EDO17367.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 1280
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL Y++ K K + E+ +L+K ++ QSGI+YC ++ C+ VA ++Q +I
Sbjct: 723 SFNRTNLNYQVKAKSKETINEICTLLKGRFKNQSGIIYCHSKNSCEQVAEQISQHKIRCA 782
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R ++Q W N++ V
Sbjct: 783 FYHAGIDPAERLQIQKAWQKNQIQV 807
>gi|374702008|ref|ZP_09708878.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. S9]
Length = 711
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYCL+RK+ D VAA L+ +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFLAAR-KGDAGIVYCLSRKKVDEVAAFLSAQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL +LR Q ++++ +
Sbjct: 255 ALPYHAGLPSELRAYHQKRFLNEE 278
>gi|381188984|ref|ZP_09896542.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379649120|gb|EIA07697.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 704
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R NL E+ P + +K+++ I AK +SGIVYCL+RK + +A L + IN
Sbjct: 196 FISSFDRKNLSLEVRPALDRVKQIVDFISAK-PRESGIVYCLSRKTTEELAEKLQKAGIN 254
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A +YHAGL +R++ Q +I++ V T+
Sbjct: 255 AKAYHAGLDSTVRSKTQDDFINDDCQVVCATI 286
>gi|281421757|ref|ZP_06252756.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281404252|gb|EFB34932.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 726
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK K++ +++I I+ ++ G+SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKNKDIDRQIIMFIR-QHKGKSGIIYCLSRKKVEELAEVLKANEI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 260 KAAPYHAGLDSATRSQTQDDFLMERIDV 287
>gi|429964145|gb|ELA46143.1| RecQ family ATP-dependent DNA helicase [Vavraia culicis
'floridensis']
Length = 955
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEIL-PKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NLKY +L KK+ + +++S I Y GI+Y ++++E + V+ L I
Sbjct: 650 FRSSFNRKNLKYIVLHKKKDTISQIVSFINTYYPSSPGIIYVISKREAEEVSYKL-NNHI 708
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
++ YHAGL K RN++Q +W ++K+ V
Sbjct: 709 TSMYYHAGLTKKERNKIQREWTNDKIRV 736
>gi|351732072|ref|ZP_08949763.1| ATP-dependent DNA helicase RecQ [Acidovorax radicis N35]
Length = 631
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I KK+V +++ I+ ++ G++G+VYC +RK + +AA L +
Sbjct: 215 FISSFDRPNIRYRIEEKKDVTTQLLRFIEREHVGEAGVVYCQSRKRVEELAATLCDAGLT 274
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL K+R + Q +++
Sbjct: 275 ALPYHAGLDTKVRQKNQDRFL 295
>gi|383420495|gb|AFH33461.1| ATP-dependent DNA helicase Q1 [Macaca mulatta]
Length = 649
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR+NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRSNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTAVHRKWSANEIQVVVATV 372
>gi|445115605|ref|ZP_21378301.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
gi|444840372|gb|ELX67406.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
Length = 297
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKKN +++I IK G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKKNEEDTNRQIIKFIKQNL-GKSGIIYCLSRKKVEELAAVLQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ + V
Sbjct: 260 DIKAAPYHAGLDSETRSKTQDDFLMENIDV 289
>gi|374984916|ref|YP_004960411.1| ATP-dependent DNA helicase [Streptomyces bingchenggensis BCW-1]
gi|297155568|gb|ADI05280.1| ATP-dependent DNA helicase [Streptomyces bingchenggensis BCW-1]
Length = 611
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK + ++++ L++ ++ G +GI+YCL+R + A L + I
Sbjct: 195 FVASFDRPNIQYRIAPKNDPKRQLLELLRTEHQGHAGIIYCLSRASVEKTAEFLVKNGIE 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R E Q +++
Sbjct: 255 ALPYHAGLDARIRAENQARFL 275
>gi|455648922|gb|EMF27756.1| helicase [Streptomyces gancidicus BKS 13-15]
Length = 653
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K++++ ++ +++G++GIVYCL+R D A L++ I
Sbjct: 208 FVASFDRPNIQYRIVPKADPRKQLLAFLREEHAGEAGIVYCLSRNSVDKTAEFLSRNGIE 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 268 AVPYHAGLDAGTRAAHQARFL 288
>gi|355716039|gb|AES05481.1| RecQ protein-like protein [Mustela putorius furo]
Length = 592
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YEI K +++ ++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 222 FTASFNRPNLYYEIRQKPSNTEDLFEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQK 281
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + +V +W +N++ V TV
Sbjct: 282 LGIQAGAYHANMEPEDKTDVHRRWSANEIQVVVATV 317
>gi|344338286|ref|ZP_08769218.1| ATP-dependent DNA helicase RecQ [Thiocapsa marina 5811]
gi|343801568|gb|EGV19510.1| ATP-dependent DNA helicase RecQ [Thiocapsa marina 5811]
Length = 734
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K + +++I+ ++ ++ G +GIVYCL+R++ + AA LA + I
Sbjct: 196 FVSSFDRPNIRYRIVEKASPRQQLIAFLRTEHPGDAGIVYCLSRRKVEETAAYLATQGIA 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 256 ALPYHAGLPAETRRTHQARFL 276
>gi|297201637|ref|ZP_06919034.1| ATP-dependent DNA helicase RecQ [Streptomyces sviceus ATCC 29083]
gi|297147936|gb|EDY55025.2| ATP-dependent DNA helicase RecQ [Streptomyces sviceus ATCC 29083]
Length = 667
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 58/87 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K++++ ++ +++G +GIVYCL+RK ++ A L++ I
Sbjct: 206 FVASFDRPNIQYRIIPKADPKKQLLAFLREEHAGDAGIVYCLSRKSVEATAEFLSRNGIE 265
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL R Q +++ + V
Sbjct: 266 AVPYHAGLDAGTRAAHQSRFLREEALV 292
>gi|387015566|gb|AFJ49902.1| ATP-dependent DNA helicase Q1 [Crotalus adamanteus]
Length = 652
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K +N +++++ LI +Y G SGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSSAQNCIEDIVKLINGRYKGLSGIIYCFSQKDAEQVTMSLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + K ++ V +W +N++ V TV
Sbjct: 337 LGIKAGTYHANMEPKDKSRVHKRWCANEIQVVVATV 372
>gi|119510429|ref|ZP_01629563.1| ATP-dependent DNA helicase [Nodularia spumigena CCY9414]
gi|119464958|gb|EAW45861.1| ATP-dependent DNA helicase [Nodularia spumigena CCY9414]
Length = 721
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SFNR NL YE+ PK K+ E++ LI+ + S I+YCLTRK+ D + L +++
Sbjct: 203 LASFNRQNLYYEVRPKTKSAYAEILELIRE--TDGSTIIYCLTRKKVDELTFKLQNDKVV 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+SYHAGL+D+ R++ Q ++I + V V
Sbjct: 261 ALSYHAGLSDEERSKNQTRFIRDDVRV 287
>gi|326431575|gb|EGD77145.1| RecQ5 [Salpingoeca sp. ATCC 50818]
Length = 1451
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K K ++E+ I+ ++ + GIVYCL+RKEC++V+ AL Q
Sbjct: 906 FEQSFNRPNLFYEVRKKSSYKKCVEEIGKEIRTRFRNKCGIVYCLSRKECETVSQALNQS 965
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
++ YHAG+ R Q +W S KV++
Sbjct: 966 GHKSLFYHAGMDPADREAYQDQWQSGKVNI 995
>gi|384567499|ref|ZP_10014603.1| ATP-dependent DNA helicase RecQ [Saccharomonospora glauca K62]
gi|384523353|gb|EIF00549.1| ATP-dependent DNA helicase RecQ [Saccharomonospora glauca K62]
Length = 607
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PKK+ K+++ I+ ++ G +GIVYCL+R+ + A L + +
Sbjct: 197 FVSSFDRPNIQYRIVPKKDPRKQLLRFIRTEHVGDAGIVYCLSRRSVEETAEFLTRNGVE 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 ALPYHAGLDAGTRAHHQARFL 277
>gi|91786081|ref|YP_547033.1| ATP-dependent DNA helicase RecQ [Polaromonas sp. JS666]
gi|91695306|gb|ABE42135.1| ATP-dependent DNA helicase RecQ [Polaromonas sp. JS666]
Length = 633
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K + ++++ I++++ G++GIVYC +RK + +AA L +
Sbjct: 216 FVSSFDRPNIRYTIVEKADPTRQLLRFIESEHEGEAGIVYCQSRKRVEEIAATLQDAGLK 275
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAGL LR + Q +++
Sbjct: 276 ALAYHAGLDASLRQQRQDRFL 296
>gi|395330106|gb|EJF62490.1| ATP-dependent RNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 582
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 4 SFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RI 59
SFNR NL YE+ PKK+ + E+ +LI+ ++ +GI+YC +R +C+ VA L + ++
Sbjct: 266 SFNRTNLDYEVRPKKSHKACVDEIAALIQTRFPTHTGIIYCHSRDKCEEVAKELRERYKL 325
Query: 60 NAISYHAGLADKLRNEVQMKWISNKV 85
NA +HAGLAD + VQ +W +V
Sbjct: 326 NAKHFHAGLADCDKRRVQREWSEGEV 351
>gi|310790854|gb|EFQ26387.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 1602
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQER 58
F SFNR NL YE+ K K ++ ++ LI +KY+GQ GI+Y L+RK + VA L +Q
Sbjct: 905 FSQSFNRPNLTYEVRRKEKELIHKIADLIMSKYNGQCGIIYTLSRKTSEQVAEKLRSQYN 964
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + R VQ +W ++K+HV
Sbjct: 965 IKASHYHAQMTPEDRIRVQREWQADKIHV 993
>gi|407697072|ref|YP_006821860.1| ATP-dependent DNA helicase RecQ [Alcanivorax dieselolei B5]
gi|407254410|gb|AFT71517.1| ATP-dependent DNA helicase RecQ [Alcanivorax dieselolei B5]
Length = 599
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I K + ++++ LI+ +++G +GIVYCL+R + D A L Q+ I
Sbjct: 196 FVSSFDRPNIQYRIERKDSARQQLLRLIRNEHAGDAGIVYCLSRNKVDQTADWLNQQGIA 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 256 ALPYHAGLGGEMRARHQQRFL 276
>gi|325283330|ref|YP_004255871.1| ATP-dependent DNA helicase RecQ [Deinococcus proteolyticus MRP]
gi|324315139|gb|ADY26254.1| ATP-dependent DNA helicase RecQ [Deinococcus proteolyticus MRP]
Length = 614
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I K N ++++ I+ +++G +GIVYCL+RK + A L+ +
Sbjct: 207 FVASFDRPNIQYRIAGKDNAKRQLLEFIRTEHAGDAGIVYCLSRKSVEDTAQFLSDSGVP 266
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAGL R E Q +++
Sbjct: 267 ALAYHAGLDHAQRQEAQARFL 287
>gi|313204327|ref|YP_004042984.1| ATP-dependent DNA helicase recq [Paludibacter propionicigenes WB4]
gi|312443643|gb|ADQ79999.1| ATP-dependent DNA helicase RecQ [Paludibacter propionicigenes WB4]
Length = 730
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNRANL YE+ PK NV K++I I+++ +G+SGI+YCL+RK+ + ++ L I
Sbjct: 201 FKSSFNRANLYYEVRPKTNNVDKDIIKYIRSQ-AGKSGIIYCLSRKKVEELSETLRMNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+ + YHAG+ +R++ Q ++ K V
Sbjct: 260 SVLPYHAGMDSAVRSQNQDSFLMEKAEV 287
>gi|149374800|ref|ZP_01892573.1| ATP-dependent DNA helicase RecQ [Marinobacter algicola DG893]
gi|149360689|gb|EDM49140.1| ATP-dependent DNA helicase RecQ [Marinobacter algicola DG893]
Length = 637
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I PK N K+++ IKA++ G GIVYCL+R + D+ A L+ +
Sbjct: 228 FISGFDRPNIQYRISPKTNANKQLLDFIKAEHDGDCGIVYCLSRNKVDNTAKLLSDKGYT 287
Query: 61 AISYHAGL--ADKLRNE 75
A+ YHAGL D+ R++
Sbjct: 288 ALPYHAGLNAIDRARHQ 304
>gi|418462176|ref|ZP_13033232.1| ATP-dependent DNA helicase RecQ [Saccharomonospora azurea SZMC
14600]
gi|418463981|ref|ZP_13034925.1| ATP-dependent DNA helicase RecQ [Saccharomonospora azurea SZMC
14600]
gi|359731015|gb|EHK80129.1| ATP-dependent DNA helicase RecQ [Saccharomonospora azurea SZMC
14600]
gi|359737678|gb|EHK86605.1| ATP-dependent DNA helicase RecQ [Saccharomonospora azurea SZMC
14600]
Length = 610
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PK++ K+++ ++ +++G +GIVYCL+R+ + A L + I
Sbjct: 197 FVSSFDRPNIQYRIVPKRDPRKQLLDFLRTEHAGDAGIVYCLSRRSVEETAEFLTRNGIE 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 ALPYHAGLDAGTRARHQARFL 277
>gi|194291033|ref|YP_002006940.1| ATP-dependent DNA helicase [Cupriavidus taiwanensis LMG 19424]
gi|193224868|emb|CAQ70879.1| ATP-dependent DNA helicase [Cupriavidus taiwanensis LMG 19424]
Length = 615
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSG-----QSGIVYCLTRKECDSVAAALA 55
FISSF+R N++Y I+ K N +++++ IKA+++ SGIVYCL+RK+ + A L+
Sbjct: 199 FISSFDRPNIRYRIVEKDNARQQLLAFIKAEHTAADGTHDSGIVYCLSRKKVEDTAQWLS 258
Query: 56 QERINAISYHAGLADKLRNEVQMKW 80
+ INA++YHAG+ ++R Q ++
Sbjct: 259 GQGINALAYHAGMDAQVRQHHQARF 283
>gi|397517493|ref|XP_003828945.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1 [Pan
paniscus]
Length = 649
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|619863|gb|AAA60261.1| DNA helicase [Homo sapiens]
Length = 659
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|329902979|ref|ZP_08273323.1| ATP-dependent DNA helicase RecQ [Oxalobacteraceae bacterium
IMCC9480]
gi|327548531|gb|EGF33195.1| ATP-dependent DNA helicase RecQ [Oxalobacteraceae bacterium
IMCC9480]
Length = 611
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y+I+ K N K+++ I+A++ G +GIVYCL+RK+ + A L I
Sbjct: 201 FISSFDRPNIRYQIVEKANGRKQLLDFIQAEHMGDAGIVYCLSRKKVEETAEFLNASGIR 260
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ + R++ Q +++
Sbjct: 261 ALPYHAGMKFEERSKNQARFL 281
>gi|145478455|ref|XP_001425250.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392319|emb|CAK57852.1| unnamed protein product [Paramecium tetraurelia]
Length = 667
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 3 SSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
SSFNR NL YE+ + K ++E+ I Y QSGI+YCLT+ EC +++ +L Q I
Sbjct: 52 SSFNRPNLIYEVKLREEFKRTVQEIKEFINLTYPKQSGIIYCLTQSECQTLSQSLIQHGI 111
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL + R+ + W+ N+V V
Sbjct: 112 GSDFYHAGLTENERHRIHKNWLMNEVQV 139
>gi|14591902|ref|NP_116559.1| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|14591904|ref|NP_002898.2| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|218512113|sp|P46063.3|RECQ1_HUMAN RecName: Full=ATP-dependent DNA helicase Q1; AltName: Full=DNA
helicase, RecQ-like type 1; Short=RecQ1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|119616840|gb|EAW96434.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616841|gb|EAW96435.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616842|gb|EAW96436.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616843|gb|EAW96437.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616844|gb|EAW96438.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|158256686|dbj|BAF84316.1| unnamed protein product [Homo sapiens]
gi|261858616|dbj|BAI45830.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|392399436|ref|YP_006436037.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
gi|390530514|gb|AFM06244.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
Length = 729
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SFNR NL YE+ PK NV K++I +K K GQSGI+YCL+RK+ + + L I
Sbjct: 199 FKTSFNRQNLYYEVRPKTNVKKQLIKYLKGK-KGQSGIIYCLSRKKVEEIHEFLKVNDIK 257
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL +R + Q +++ +V +
Sbjct: 258 SRPYHAGLDSSIRMQNQDAFLNEEVDI 284
>gi|431908388|gb|ELK11985.1| ATP-dependent DNA helicase Q1 [Pteropus alecto]
Length = 1213
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y+GQSGI+YC ++K+ + V +L +
Sbjct: 843 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYNGQSGIIYCFSQKDSEQVTVSLQK 902
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A +YHA + + + +V +W +N++ V
Sbjct: 903 LGIHAGAYHANMEPEDKTKVHRRWSANEIQV 933
>gi|409195579|ref|ZP_11224242.1| putative ATP-dependent DNA helicase [Marinilabilia salmonicolor JCM
21150]
Length = 726
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SSFNRANL YE+ PK N +E+I ++K +G+S I+YCL+RK+ + +A L I A+
Sbjct: 203 SSFNRANLFYEVRPKVNATREIIKILKEN-TGKSAIIYCLSRKKVEELAETLVVNGIKAL 261
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R+ Q K++ ++ V
Sbjct: 262 PYHAGMDAATRSGNQDKFLMEEIDV 286
>gi|332232887|ref|XP_003265634.1| PREDICTED: ATP-dependent DNA helicase Q1 [Nomascus leucogenys]
Length = 649
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|332839802|ref|XP_520788.3| PREDICTED: ATP-dependent DNA helicase Q1 [Pan troglodytes]
gi|410267548|gb|JAA21740.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267556|gb|JAA21744.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267560|gb|JAA21746.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304460|gb|JAA30830.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304462|gb|JAA30831.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352515|gb|JAA42861.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352521|gb|JAA42864.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352523|gb|JAA42865.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352525|gb|JAA42866.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352527|gb|JAA42867.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
Length = 649
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|30584589|gb|AAP36547.1| Homo sapiens RecQ protein-like (DNA helicase Q1-like) [synthetic
construct]
gi|61369219|gb|AAX43302.1| RecQ protein-like [synthetic construct]
Length = 650
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|436838278|ref|YP_007323494.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
gi|384069691|emb|CCH02901.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
Length = 735
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI SFNR NL ++LP N + ++ L+ K SGI+YCL+RK C+SVAA L ++ +
Sbjct: 214 FIDSFNRTNLSLQVLPGTNRIGQIAKLLSLK-PDTSGIIYCLSRKSCESVAAKLIEKGYS 272
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R VQ ++ + V +
Sbjct: 273 AAYYHAGMDPNERARVQEAFLRDDVRI 299
>gi|426371952|ref|XP_004052901.1| PREDICTED: ATP-dependent DNA helicase Q1 [Gorilla gorilla gorilla]
Length = 649
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|531243|dbj|BAA07200.1| DNA helicase Q1 [Homo sapiens]
Length = 649
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|395839223|ref|XP_003792496.1| PREDICTED: ATP-dependent DNA helicase Q1 [Otolemur garnettii]
Length = 648
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 278 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTGSLQS 337
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
INA +YHA + + + V W +N++ V TV
Sbjct: 338 LGINAGAYHANMEPEDKTRVHRSWAANELQVVVATV 373
>gi|110636721|ref|YP_676928.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
gi|110279402|gb|ABG57588.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
Length = 725
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PK + K++I IKA+ GQSGI+YCL+RK+ + +A L +
Sbjct: 201 FKSSFNRENLFYEVRPKGDTKKKLIKFIKAR-KGQSGIIYCLSRKKVEEIAELLRVNDVK 259
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL +R Q +++ V
Sbjct: 260 ALPYHAGLEPAVRMGNQDAFLNEDADV 286
>gi|12654453|gb|AAH01052.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|30583077|gb|AAP35783.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|61359045|gb|AAX41660.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|443898809|dbj|GAC76143.1| hypothetical protein PANT_19d00137 [Pseudozyma antarctica T-34]
Length = 1364
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 4 SFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER-IN 60
SFNR NL+Y++ PK VL+E+ SLI + Q GI+YC +R+ C++VA L+ + I+
Sbjct: 843 SFNRPNLEYQVRPKPGNKVLEEISSLILTSHKDQCGIIYCFSRESCETVAHDLSTKYGIS 902
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHA L+ R VQ KW NK V
Sbjct: 903 AHHYHAKLSADDRAMVQQKWQQNKFRV 929
>gi|385677146|ref|ZP_10051074.1| ATP-dependent DNA helicase RecQ [Amycolatopsis sp. ATCC 39116]
Length = 611
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K+++ LI+ ++ G +GIVYCL+R + A L I+
Sbjct: 203 FVASFDRPNIQYRIVPKAEPKKQLLDLIRTEHPGDAGIVYCLSRNSVEKTAEFLVANGIS 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 263 AVPYHAGLDSRTRARNQARFL 283
>gi|151568124|pdb|2V1X|A Chain A, Crystal Structure Of Human Recq-Like Dna Helicase
gi|151568125|pdb|2V1X|B Chain B, Crystal Structure Of Human Recq-Like Dna Helicase
gi|282403581|pdb|2WWY|A Chain A, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
gi|282403582|pdb|2WWY|B Chain B, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
Length = 591
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 230 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 289
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 290 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 325
>gi|407647992|ref|YP_006811751.1| ATP-dependent DNA helicase [Nocardia brasiliensis ATCC 700358]
gi|407310876|gb|AFU04777.1| ATP-dependent DNA helicase [Nocardia brasiliensis ATCC 700358]
Length = 623
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK ++++ I +++G +GIVYCL+R + AA L + I
Sbjct: 216 FVASFDRPNIQYRIEPKNKPDRQLLEFINTEHAGDAGIVYCLSRNSVEKTAAFLTENGIR 275
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++ R + Q +++
Sbjct: 276 AVPYHAGLDNRTRAQNQARFL 296
>gi|62858709|ref|NP_001016316.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|89266858|emb|CAJ83846.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|213624210|gb|AAI70790.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
Length = 558
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ + +++ LI ++Y GQSGI+YC ++K+ + V +L +
Sbjct: 279 FTASFNRPNLFYEVRLKPSSSQDFIADIVKLINSRYRGQSGIIYCFSQKDSEHVTMSLQK 338
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + +V KW +N++ + TV
Sbjct: 339 LGIRAGTYHANMEPRDKTKVHTKWTANEIQIVVATV 374
>gi|410095931|ref|ZP_11290923.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
gi|409227962|gb|EKN20857.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
Length = 727
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YE+ PK +NV +E+I IKA G+SGIVYCL+RK+ + A L I
Sbjct: 201 FKSSFNRSNLYYEVRPKDENVDREIIKYIKAN-EGKSGIVYCLSRKKVEEFADILKANGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAG+ R+ Q ++ K V
Sbjct: 260 KALAYHAGMDSGQRSANQDAFLLEKADV 287
>gi|163756913|ref|ZP_02164021.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
gi|161323149|gb|EDP94490.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
Length = 732
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 14/106 (13%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK K+V ++I IK + G+SGIVYCL+RK + +A L I
Sbjct: 203 FKASFNRPNLYYEVRPKTKDVDADIIRFIK-QNQGKSGIVYCLSRKRVEELAQVLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
NA+ YHAGL K R + Q ++ ++CD V A +A
Sbjct: 262 NAVPYHAGLDPKKRAKHQDMFL------------MEDCDVVVATIA 295
>gi|428213965|ref|YP_007087109.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
gi|428002346|gb|AFY83189.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
Length = 836
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K K +E++ LI+ S SGI+YCL+R+ D VA L +E I+
Sbjct: 211 IASFNRPNLYYEVRQKNKQSYRELVKLIRE--SKGSGIIYCLSRRRVDEVAYKLQREGID 268
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
AI YHAG+ D+ R+ Q ++I + V
Sbjct: 269 AIPYHAGMNDQERSSNQTRFIRDDAQV 295
>gi|380513575|ref|ZP_09856982.1| DNA helicase superfamily II protein [Xanthomonas sacchari NCPPB
4393]
Length = 602
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K N ++++ ++A + G +GIVYC++R++ + A LA+E +N
Sbjct: 196 FVSSFDRPNIRYTVVQKDNARRQLLDFLRA-HRGSAGIVYCMSRRKVEETADFLAREGLN 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R + Q +++
Sbjct: 255 ALPYHAGLPAEVRADNQRRFL 275
>gi|167751826|ref|ZP_02423953.1| hypothetical protein ALIPUT_00068 [Alistipes putredinis DSM 17216]
gi|167660067|gb|EDS04197.1| ATP-dependent DNA helicase RecQ [Alistipes putredinis DSM 17216]
Length = 730
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK +V +E+I IK ++ G+SGI+YCL+RK+ + + L I
Sbjct: 203 FKSSFNRPNLYYEIRPKHDVDREIIRYIK-QHEGKSGIIYCLSRKKVEELTELLVANGIR 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAG+ + R Q ++ + V
Sbjct: 262 ALAYHAGMDAQTRAANQDDFLMERADV 288
>gi|426200367|gb|EKV50291.1| hypothetical protein AGABI2DRAFT_64426 [Agaricus bisporus var.
bisporus H97]
Length = 648
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NLKY I KK N+L E++ IK ++ +G++YCL RK C +A L +E
Sbjct: 234 FTQSFNRPNLKYFIKAKKKKNMLPEIVEFIKKEHPNHTGVIYCLARKSCQLLAEQLQKEG 293
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A +HAGL+ + +N + W ++K HV
Sbjct: 294 VAANFFHAGLSKEEKNRLLESWKADKFHV 322
>gi|339327532|ref|YP_004687225.1| ATP-dependent DNA helicase RecQ [Cupriavidus necator N-1]
gi|338167689|gb|AEI78744.1| ATP-dependent DNA helicase RecQ [Cupriavidus necator N-1]
Length = 628
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSG-----QSGIVYCLTRKECDSVAAALA 55
FISSF+R N++Y I+ K N +++++ IKA+++ SGIVYCL+RK+ + A L+
Sbjct: 212 FISSFDRPNIRYRIVEKDNARQQLLAFIKAEHTAADGTHDSGIVYCLSRKKVEDTAQWLS 271
Query: 56 QERINAISYHAGLADKLRNEVQMKW 80
+ INA+ YHAG+ ++R Q ++
Sbjct: 272 GQGINALGYHAGMDAQVRQHHQARF 296
>gi|327291741|ref|XP_003230579.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Anolis
carolinensis]
Length = 451
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K +N +++++ LI +Y G SGI+YC ++K+ + V +L Q
Sbjct: 277 FTASFNRPNLYYEVRQKSPVAQNFIEDIVKLINRRYKGLSGIIYCFSQKDAEQVTMSLQQ 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + K ++ V +W +N++ + TV
Sbjct: 337 LGIKAGTYHANMEPKDKSRVHKRWSANEIQIVVATV 372
>gi|339483748|ref|YP_004695534.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. Is79A3]
gi|338805893|gb|AEJ02135.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. Is79A3]
Length = 599
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N ++++ I+A++ G +GIVYCL+RK+ + A L +
Sbjct: 195 FVSSFDRPNIRYQIIDKTNSRSQLLTFIQAEHPGDAGIVYCLSRKKVEETTACLVDHGMR 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ + R+ Q K++
Sbjct: 255 AVAYHAGMNMQERSLNQEKFL 275
>gi|113869442|ref|YP_727931.1| ATP-dependent DNA helicase [Ralstonia eutropha H16]
gi|113528218|emb|CAJ94563.1| ATP-dependent DNA helicase [Ralstonia eutropha H16]
Length = 615
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSG-----QSGIVYCLTRKECDSVAAALA 55
FISSF+R N++Y I+ K N +++++ IKA+++ SGIVYCL+RK+ + A L+
Sbjct: 199 FISSFDRPNIRYRIVEKDNARQQLLAFIKAEHTAADGTHDSGIVYCLSRKKVEDTAQWLS 258
Query: 56 QERINAISYHAGLADKLRNEVQMKW 80
+ INA+ YHAG+ ++R Q ++
Sbjct: 259 GQGINALGYHAGMDAQVRQHHQARF 283
>gi|428307721|ref|YP_007144546.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
gi|428249256|gb|AFZ15036.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
Length = 728
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
ISSFNR NL YE+ L +K +++ LI+ +Y G SGIVYCL+R+ D VA L ++ I+
Sbjct: 203 ISSFNRPNLYYEVQLKQKQAYLQLLKLIR-QYEG-SGIVYCLSRRHVDEVAFRLQKDGIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ D+ R Q ++I + V V
Sbjct: 261 ALPYHAGMTDEERAYNQTRFIRDDVQV 287
>gi|403269130|ref|XP_003926609.1| PREDICTED: ATP-dependent DNA helicase Q1 [Saimiri boliviensis
boliviensis]
Length = 649
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPPNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANMEPEDKTKVHRKWSANEIQVVVATV 372
>gi|336363644|gb|EGN92022.1| hypothetical protein SERLA73DRAFT_99863 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380498|gb|EGO21651.1| hypothetical protein SERLADRAFT_357494 [Serpula lacrymans var.
lacrymans S7.9]
Length = 527
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE- 57
SFNR NL Y + PK KN L+ +++ IK+ + +G++YCL+R+ CD VA L +E
Sbjct: 205 LTQSFNRPNLHYSVRPKAGKNALQPIVAFIKSNHPNSTGVIYCLSRQNCDDVAQKLREEY 264
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+I+A YHA ++ R Q+ W ++K V TV
Sbjct: 265 KIDARPYHAAMSALDRERNQVDWQNDKYKVIVATV 299
>gi|86751799|ref|YP_488295.1| ATP-dependent DNA helicase, RecQ [Rhodopseudomonas palustris HaA2]
gi|86574827|gb|ABD09384.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris HaA2]
Length = 618
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 55/82 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K+N ++ + I K+ G SG+VYCL+R + + +A L + I+
Sbjct: 208 FVSSFDRPNIRYAIVDKQNAPAQLKAFIADKHMGHSGVVYCLSRAKVEDIADTLCKAGID 267
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL ++R Q ++I+
Sbjct: 268 ALPYHAGLPAEIRARNQDRFIN 289
>gi|386821390|ref|ZP_10108606.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386426496|gb|EIJ40326.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 699
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R NL E+ P + +K++I + K +SGIVYCL+RK +S+A L Q N
Sbjct: 196 FVASFDRKNLSLEVRPGTDRIKQIIQFLN-KRPNESGIVYCLSRKTTESIAEKLQQAGYN 254
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A +YHAG+ R++VQ +I++K + TV
Sbjct: 255 AEAYHAGVNHDGRSKVQEDFINDKTQIVCATV 286
>gi|197100975|ref|NP_001124706.1| ATP-dependent DNA helicase Q1 [Pongo abelii]
gi|75070978|sp|Q5RF63.1|RECQ1_PONAB RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|55725460|emb|CAH89594.1| hypothetical protein [Pongo abelii]
Length = 649
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLRN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATV 372
>gi|124506920|ref|XP_001352057.1| DNA helicase, putative [Plasmodium falciparum 3D7]
gi|23505086|emb|CAD51868.1| DNA helicase, putative [Plasmodium falciparum 3D7]
Length = 728
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Query: 3 SSFNRANLKYEIL-------PKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALA 55
+SFNR NLKY I+ KKN + ++I+ + + G+ GI+YC R CD ++ L
Sbjct: 278 TSFNRPNLKYIIIYSDLIKDEKKNSVCDIIN--EKRNKGKIGIIYCFKRNTCDEISKYLR 335
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHV 87
++ I A+SYHAGL + R +Q KWIS K ++
Sbjct: 336 EKGIQALSYHAGLTNNTRKRIQQKWISGKTNI 367
>gi|345882276|ref|ZP_08833781.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
gi|343918032|gb|EGV28804.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
Length = 725
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK N + K++I I+ + +G+SGI+YCL+RK+ + +A L I
Sbjct: 201 FRSSFNRPNLYYEVRPKTNDIDKQIIKFIR-QNAGKSGIIYCLSRKKVEELAEILRANDI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL +R++ Q ++ ++ V
Sbjct: 260 KAAPYHAGLESGVRSQTQDDFLMERLDV 287
>gi|294672822|ref|YP_003573438.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473845|gb|ADE83234.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 722
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV K++I IK ++ G+SGI+YCL+RK+ + +A L I
Sbjct: 197 FKSSFNRPNLYYEVRPKTANVDKDIIKFIK-QHPGKSGIIYCLSRKKVEELAEILRVNGI 255
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL R+ Q +++ + V
Sbjct: 256 KAAAYHAGLDSNTRSNTQDEFLMENIDV 283
>gi|196228960|ref|ZP_03127826.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
gi|196227241|gb|EDY21745.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
Length = 610
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ +SFNR NL Y ++P+ +V++ ++++ G+SGI+YC +RK +SVA LA +RI+
Sbjct: 198 YTASFNRPNLTYRVVPRAQPYDQVLAFLRSR-PGESGIIYCSSRKATESVAERLADDRIS 256
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL + R Q ++ ++V V
Sbjct: 257 AKPYHAGLTAEERGRHQELFLRDEVRV 283
>gi|365901690|ref|ZP_09439521.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. STM 3843]
gi|365417574|emb|CCE12063.1| ATP-dependent DNA helicase RecQ [Bradyrhizobium sp. STM 3843]
Length = 621
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 55/82 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++YEI+ K N ++ S I+ ++ G +G+VYCL+R + + VAA L + I
Sbjct: 206 FVASFDRPNIRYEIVDKHNGPAQLKSFIRERHLGDAGVVYCLSRAKVEDVAATLTEAGIP 265
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R Q ++I+
Sbjct: 266 ALPYHAGLDASVRARNQDRFIN 287
>gi|402885395|ref|XP_003906142.1| PREDICTED: ATP-dependent DNA helicase Q1 [Papio anubis]
Length = 649
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLFYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA L + + V KW +N++ V TV
Sbjct: 337 LGIHAGAYHANLEPEDKTAVHRKWSANEIQVVVATV 372
>gi|149714020|ref|XP_001502209.1| PREDICTED: ATP-dependent DNA helicase Q1 [Equus caballus]
Length = 649
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++V+ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDVVKLIHGRYKGQSGIIYCFSQKDSEQVTVSLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGAYHANMEPEDKTKVHRRWSANEIQVVVATV 372
>gi|433678735|ref|ZP_20510560.1| DNA helicase [Xanthomonas translucens pv. translucens DSM 18974]
gi|430816172|emb|CCP41071.1| DNA helicase [Xanthomonas translucens pv. translucens DSM 18974]
Length = 602
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K N ++++ ++A + G +GIVYC++R++ + A LA+E +N
Sbjct: 196 FVSSFDRPNIRYTVVQKDNSKRQLLDFLRA-HRGSAGIVYCMSRRKVEETAEFLAKEGLN 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R + Q +++
Sbjct: 255 ALPYHAGLPAEVRADNQRRFL 275
>gi|452125847|ref|ZP_21938430.1| ATP-dependent DNA helicase [Bordetella holmesii F627]
gi|452129210|ref|ZP_21941786.1| ATP-dependent DNA helicase [Bordetella holmesii H558]
gi|451920942|gb|EMD71087.1| ATP-dependent DNA helicase [Bordetella holmesii F627]
gi|451925080|gb|EMD75220.1| ATP-dependent DNA helicase [Bordetella holmesii H558]
Length = 606
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 56/81 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SF+R N++Y I+ K V K+++ LI++++ G SG+VYCL+R + A L + ++
Sbjct: 197 YVASFDRPNIRYRIVEKNEVRKQLLDLIRSEHEGDSGVVYCLSRARVEETAEFLCNQGVH 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ ++R Q +++
Sbjct: 257 ALPYHAGLSAQVRATNQSRFL 277
>gi|302533081|ref|ZP_07285423.1| ATP-dependent DNA helicase RecQ [Streptomyces sp. C]
gi|302441976|gb|EFL13792.1| ATP-dependent DNA helicase RecQ [Streptomyces sp. C]
Length = 669
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I K L +++ LI++++ G +G+VYCL+R + AA L ++ I+
Sbjct: 204 FVASFDRPNIQYRIAAKDKPLAQLLELIRSEHDGDAGVVYCLSRSSVEKTAAFLVEQGID 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ + R Q +++
Sbjct: 264 AVAYHAGMDARTRAANQARFL 284
>gi|344345505|ref|ZP_08776355.1| ATP-dependent DNA helicase RecQ [Marichromatium purpuratum 984]
gi|343802948|gb|EGV20864.1| ATP-dependent DNA helicase RecQ [Marichromatium purpuratum 984]
Length = 523
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K + ++++ ++ ++ +GIVYCL+RK + AA LA E
Sbjct: 196 FVSSFDRPNIRYRVVEKASPRQQLLDFLRREHPQDAGIVYCLSRKRVEETAAFLAAEGFT 255
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGLA + R Q +++ ++
Sbjct: 256 ALPYHAGLAAEQRRAHQARFLRDE 279
>gi|340348782|ref|ZP_08671813.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
gi|339613206|gb|EGQ17991.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
Length = 727
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKKN +++I IK G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKKNEEDTNRQIIKFIKQNL-GKSGIIYCLSRKKVEELAAVLQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ + V
Sbjct: 260 DIKAAPYHAGLDSETRSKTQDDFLMENIDV 289
>gi|271968176|ref|YP_003342372.1| ATP-dependent DNA helicase [Streptosporangium roseum DSM 43021]
gi|270511351|gb|ACZ89629.1| ATP-dependent DNA helicase [Streptosporangium roseum DSM 43021]
Length = 628
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I PK ++++ L++ ++ G +GIVYCL+R + A L Q I+
Sbjct: 204 FVSSFDRPNIQYRIAPKNEPKRQLLKLLRTEHPGDAGIVYCLSRSSVEKTAEFLVQNGIS 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 264 ALPYHAGLDARTRAANQARFL 284
>gi|156359349|ref|XP_001624732.1| predicted protein [Nematostella vectensis]
gi|156211530|gb|EDO32632.1| predicted protein [Nematostella vectensis]
Length = 582
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 3 SSFNRANLKYEILPKKNVLKEVIS----LIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
+SFNR NL YE+ K +S LI ++SG SGI+YC +RK+ + VA ++
Sbjct: 278 ASFNRPNLFYEVQSKPTTNSAFMSTIHQLITKRFSGDSGIIYCFSRKDAEQVAIEMSSRG 337
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A YHA + + R++V M W +NK+ V TV
Sbjct: 338 IKAACYHADMPPESRSQVHMAWTTNKLQVVVATV 371
>gi|374598547|ref|ZP_09671549.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|423323213|ref|ZP_17301055.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
gi|373910017|gb|EHQ41866.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|404609764|gb|EKB09128.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
Length = 731
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YEI PK KN+ ++I IK + G+SG++YCL+RK+ + +A L I
Sbjct: 202 FKASFNRPNLYYEIKPKTKNIESDIIRFIKQR-KGKSGVIYCLSRKKVEEIANVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|4337448|gb|AAD18127.1| ECORLD_ORF3; putative DNA enzyme; similar to H. influenzae
DNA-dependent ATPase/DNA helicase encoded by GenBank
Accession Number U32756 [Eikenella corrodens]
Length = 439
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+I+SF+R N+ Y+I+ K N K+++ + ++ G+SGIVYCL+RK+ + AA L +
Sbjct: 197 YIASFDRPNIYYQIIEKNNGKKQLLDFLHSRPHGESGIVYCLSRKKVEDTAAFLNEHGYR 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAGL RNE Q ++
Sbjct: 257 ALPYHAGLTMTERNENQHRF 276
>gi|410963996|ref|XP_003988543.1| PREDICTED: ATP-dependent DNA helicase Q1 [Felis catus]
Length = 804
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YEI K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 430 FTASFNRPNLYYEIRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQK 489
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + +V +W +N++ V TV
Sbjct: 490 LGIQAGAYHANMEPEDKTKVHRRWSANEIQVVVATV 525
>gi|403216335|emb|CCK70832.1| hypothetical protein KNAG_0F01640 [Kazachstania naganishii CBS
8797]
Length = 1373
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ IK K+ Q+GI+YC ++ C+ A L + RI
Sbjct: 812 SFNRTNLFYEVKKKSKNTIYEICDEIKRKFRNQTGIIYCHSKNSCEQTATQLQRNRIKCA 871
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAGL + R ++Q W ++++ V
Sbjct: 872 YYHAGLEPEERFKIQKSWQTDEIQV 896
>gi|291514588|emb|CBK63798.1| ATP-dependent DNA helicase RecQ [Alistipes shahii WAL 8301]
Length = 730
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK NV ++I IK G+SGI+YCL+RK+ + + L I
Sbjct: 203 FKSSFNRPNLYYEIRPKHNVDHDIIRFIKQN-EGKSGIIYCLSRKKVEELTELLVANGIR 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAG+ R Q ++ +V V
Sbjct: 262 ALAYHAGMDASTRAANQDDFLMERVEV 288
>gi|374587401|ref|ZP_09660493.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
gi|373876262|gb|EHQ08256.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
Length = 617
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R NL E+LPK+N L + + ++ + Q+GI+YC +R++ D +AAAL Q+ +
Sbjct: 214 FVAGFDRPNLFIEVLPKQNALTQTLRFLEERRD-QAGIIYCFSRRQVDDLAAALVQKGFS 272
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL D R Q ++ + + +
Sbjct: 273 ARPYHAGLGDAERAANQEAFLRDDIQI 299
>gi|150008998|ref|YP_001303741.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|255014829|ref|ZP_05286955.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_1_7]
gi|256841001|ref|ZP_05546508.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262383888|ref|ZP_06077024.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298375770|ref|ZP_06985726.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|301312048|ref|ZP_07217970.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|410102762|ref|ZP_11297687.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
gi|423330257|ref|ZP_17308041.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|423339397|ref|ZP_17317138.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|149937422|gb|ABR44119.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|256736844|gb|EEU50171.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262294786|gb|EEY82718.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298266807|gb|EFI08464.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|300830150|gb|EFK60798.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|409230778|gb|EKN23639.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|409231873|gb|EKN24721.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|409237889|gb|EKN30684.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
Length = 726
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YE+ PK N+ +E+I IKA G+SGIVYCL+RK+ + A L I
Sbjct: 201 FKSSFNRSNLYYEVRPKGTNIDREIIKYIKAN-EGKSGIVYCLSRKKVEEFADILKANGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ ++R+ Q ++ + V
Sbjct: 260 KALPYHAGMDSQVRSANQDAFLMEQADV 287
>gi|449454038|ref|XP_004144763.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NLKYE++ K K L ++ IK ++ Q GIVYCL++ EC V+ L ++ +I A
Sbjct: 389 SFDRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKA 448
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQER 108
YHAGLA + R VQ KW HVG +V C ++A + ++
Sbjct: 449 AYYHAGLAARQRVLVQKKW-----HVGDIQIV---CATIAFGMGIDK 487
>gi|388543853|ref|ZP_10147143.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. M47T1]
gi|388278410|gb|EIK97982.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. M47T1]
Length = 712
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+N K++++ + + S +GIVYCL+RK+ D AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKENPRKQLMAFLAERRS-DAGIVYCLSRKKVDETAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+SYHAGL +R Q ++++ +
Sbjct: 255 ALSYHAGLPSDVRAANQKRFLNEE 278
>gi|424842508|ref|ZP_18267133.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
gi|395320706|gb|EJF53627.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
Length = 737
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+ SFNR NL YE+ PK ++VL+ ++ IK K +SGI+Y RK + VA L+
Sbjct: 203 FMDSFNRDNLFYEVQPKGKKEDVLRRIVQFIKDKAPNESGIIYVQNRKTTEEVAKVLSVN 262
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL KLR++ Q ++ KV V
Sbjct: 263 DIKAAPYHAGLEAKLRSDTQDAFLMEKVDV 292
>gi|291392532|ref|XP_002712674.1| PREDICTED: RecQ protein-like [Oryctolagus cuniculus]
Length = 887
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 515 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 574
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A +YHA + + + +V +W +N++ V
Sbjct: 575 LGIHAGAYHANMEPEDKTKVHTRWSANEIQV 605
>gi|452823697|gb|EME30705.1| ATP-dependent DNA helicase RecQ [Galdieria sulphuraria]
Length = 1210
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-R 58
F SFNR+NL Y + KK N ++E+ I+ +Y + GI+YCL++++C+ +A L E
Sbjct: 583 FQQSFNRSNLTYCVREKKKNSIQEIAEEIRERYVHECGIIYCLSQRDCEMLADTLYHEYD 642
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVV 93
I A YHAGL D+ R W+S +VHV TV
Sbjct: 643 ILAAPYHAGLGDERRQLTHEDWMSGRVHVICATVA 677
>gi|291446961|ref|ZP_06586351.1| helicase [Streptomyces roseosporus NRRL 15998]
gi|291349908|gb|EFE76812.1| helicase [Streptomyces roseosporus NRRL 15998]
Length = 676
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K+++S +K +++G +GIVYCL+R + +A L+ +
Sbjct: 205 FVASFDRPNIQYRIVPKTEPKKQLLSFLKEEHAGDAGIVYCLSRNSTEKIAEYLSNNGVQ 264
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 265 AVPYHAGLDAGTRAAHQARFL 285
>gi|239989944|ref|ZP_04710608.1| putative ATP-dependent DNA helicase [Streptomyces roseosporus NRRL
11379]
Length = 685
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K+++S +K +++G +GIVYCL+R + +A L+ +
Sbjct: 214 FVASFDRPNIQYRIVPKTEPKKQLLSFLKEEHAGDAGIVYCLSRNSTEKIAEYLSNNGVQ 273
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 274 AVPYHAGLDAGTRAAHQARFL 294
>gi|387132182|ref|YP_006298154.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
gi|386375030|gb|AFJ09244.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
Length = 727
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKKN +++I IK G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKKNEEDTNRQIIKFIKQNL-GKSGIIYCLSRKKVEELAAVLQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ + V
Sbjct: 260 EIKAEPYHAGLDSETRSKTQDDFLMENIDV 289
>gi|431796165|ref|YP_007223069.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786930|gb|AGA77059.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 708
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y I+PK+N ++++ ++ + SGI+YCL+RK + +A L ++
Sbjct: 197 FISSFDRPNITYRIVPKRNSFEKLLDFLEY-HQKNSGIIYCLSRKNVEDMAGRLQAAGLS 255
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL + R Q K+I +KV +
Sbjct: 256 ALPYHAGLDRQTRASHQEKFIKDKVKI 282
>gi|301787243|ref|XP_002929036.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Ailuropoda
melanoleuca]
Length = 661
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YEI K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 292 FTASFNRPNLYYEIRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQK 351
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + V +W +N++ V TV
Sbjct: 352 LGIQAGAYHANMEPEDKTNVHRRWSANEIQVVVATV 387
>gi|111221260|ref|YP_712054.1| ATP-dependent DNA helicase [Frankia alni ACN14a]
gi|111148792|emb|CAJ60470.1| ATP-dependent DNA helicase [Frankia alni ACN14a]
Length = 657
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 54/80 (67%)
Query: 2 ISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
++ F+R N++Y I+PKK +++ L++ ++ G +GIVYCL+R D +A LA + I A
Sbjct: 232 VADFDRPNIQYRIVPKKEPKAQLLHLLRTEHPGDAGIVYCLSRASVDKIAEFLAGQGIPA 291
Query: 62 ISYHAGLADKLRNEVQMKWI 81
+ YHAGL + +R E Q +++
Sbjct: 292 LPYHAGLDNLVRAENQARFL 311
>gi|445120845|ref|ZP_21379373.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
gi|444839226|gb|ELX66305.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
Length = 594
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PKKN +++I IK G+SGI+YCL+RK+ + +AA L
Sbjct: 68 FKSSFNRPNLYYEVRPKKNEEDTNRQIIKFIKQNL-GKSGIIYCLSRKKVEELAAVLQAN 126
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ + V
Sbjct: 127 DIKAAPYHAGLDSETRSKTQDDFLMENIDV 156
>gi|423695963|ref|ZP_17670453.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens Q8r1-96]
gi|388003876|gb|EIK65203.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens Q8r1-96]
Length = 708
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++ +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAAFLCEQGVP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|281340169|gb|EFB15753.1| hypothetical protein PANDA_019119 [Ailuropoda melanoleuca]
Length = 640
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YEI K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 271 FTASFNRPNLYYEIRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQK 330
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + V +W +N++ V TV
Sbjct: 331 LGIQAGAYHANMEPEDKTNVHRRWSANEIQVVVATV 366
>gi|449517902|ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 10/107 (9%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NLKYE++ K K L ++ IK ++ Q GIVYCL++ EC V+ L ++ +I A
Sbjct: 389 SFDRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKA 448
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALAQER 108
YHAGLA + R VQ KW HVG +V C ++A + ++
Sbjct: 449 AYYHAGLAARQRVLVQKKW-----HVGDIQIV---CATIAFGMGIDK 487
>gi|75908908|ref|YP_323204.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
gi|75702633|gb|ABA22309.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
Length = 718
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SFNR NL YE+ PK K E++ LI+ S I+YCLTRK+ + + L +++I+
Sbjct: 203 LASFNRQNLYYEVRPKSKQAYAELLELIRDNEG--SAIIYCLTRKKVEELTFKLQKDKIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+SYHAGL D R++ Q ++I + V V T+
Sbjct: 261 ALSYHAGLPDDERSKNQTRFIRDDVRVMVATI 292
>gi|312129258|ref|YP_003996598.1| ATP-dependent DNA helicase recq [Leadbetterella byssophila DSM
17132]
gi|311905804|gb|ADQ16245.1| ATP-dependent DNA helicase RecQ [Leadbetterella byssophila DSM
17132]
Length = 773
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SFNRANL YE+ PK+N K++I + ++ G+SGIVYCL+RK+ + +A L
Sbjct: 202 FKTSFNRANLYYEVRPKQNAKKQLIKFV-SQNRGKSGIVYCLSRKKVEEIAELLNVNGFK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL ++R + Q ++ ++ CD V A +A
Sbjct: 261 ALPYHAGLDPEVRMKNQDAFL------------NENCDIVVATIA 293
>gi|345866766|ref|ZP_08818787.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
gi|344048686|gb|EGV44289.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
Length = 733
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK K+V ++I +K KY G+SGIVYCL+RK + +A L I
Sbjct: 203 FKASFNRPNLYYEVRPKTKHVDADIIRFVK-KYEGKSGIVYCLSRKRVEELAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R Q ++ V V
Sbjct: 262 KAVPYHAGLDAKSRARHQDMFLMEDVDV 289
>gi|71987997|ref|NP_001022657.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
gi|351065879|emb|CCD61880.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
Length = 608
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR+NLKY+++ K +E+ IK ++GQ+GI+YCL+R +C+ VA AL
Sbjct: 272 FRAGFNRSNLKYKVVQKPGSEDECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKS 331
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + R+ WIS K+ V
Sbjct: 332 HGIKAKHYHAYMEPVDRSGAHQGWISGKIQV 362
>gi|298708608|emb|CBJ26095.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1537
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 4 SFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE------ 57
SFNR NLKYEI PKK + + I+ + + GQSGIVYCL+RK+C+ VA+ L ++
Sbjct: 784 SFNRPNLKYEIRPKKAAVLDEIAKVMQSFPGQSGIVYCLSRKDCEKVASGLLKKLSETTG 843
Query: 58 ----RINAISYHAGLADKLRNEVQMKWISNKVHV 87
R YHA + V +W + ++H+
Sbjct: 844 GHRGRFRVDFYHADRTAAEKARVHREWSAGRIHL 877
>gi|238063590|ref|ZP_04608299.1| ATP-dependent DNA helicase recQ [Micromonospora sp. ATCC 39149]
gi|237885401|gb|EEP74229.1| ATP-dependent DNA helicase recQ [Micromonospora sp. ATCC 39149]
Length = 611
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK+ K+++ LI+ ++ G +GIVYCL+R D A LA +
Sbjct: 203 FVASFDRPNIQYRIAPKREPRKQLLDLIRTEHPGDAGIVYCLSRASVDKTAEFLAANGVA 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 263 ALPYHAGLDAATRAAHQKRFL 283
>gi|379729697|ref|YP_005321893.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
gi|378575308|gb|AFC24309.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
Length = 737
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F+ SFNR NL YE+ PK ++VL+ ++ IK K +SGI+Y RK + VA L+
Sbjct: 203 FMDSFNRDNLFYEVQPKGKKEDVLRRIVQFIKDKAPNESGIIYVQNRKTTEEVAKVLSVN 262
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL KLR++ Q ++ KV V
Sbjct: 263 DIKAAPYHAGLEAKLRSDTQDAFLMEKVDV 292
>gi|325274101|ref|ZP_08140241.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. TJI-51]
gi|324100767|gb|EGB98473.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. TJI-51]
Length = 628
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + A+ G +GIVYCL+RK+ D AA L Q+
Sbjct: 109 FLSSFDRPNIFYRIVPKEAPRKQLMAFL-AERRGNAGIVYCLSRKKVDETAAFLCQQGFP 167
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGLA + R Q ++++ +
Sbjct: 168 ALPYHAGLAAETRAANQHRFLNEE 191
>gi|325954269|ref|YP_004237929.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
gi|323436887|gb|ADX67351.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
Length = 731
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SFNR NL YE+ PK N KE++ IK K G+SG+VYCL+RK+ + + L I
Sbjct: 202 FKDSFNRPNLFYEVRPKINQDKEIVKFIK-KRQGKSGVVYCLSRKKVEELTQLLQVNGIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
AI YHAGL K R++ Q ++ V V
Sbjct: 261 AIPYHAGLDAKTRSKHQDMFLMEDVDV 287
>gi|296388148|ref|ZP_06877623.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PAb1]
Length = 460
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + + G +GIVYCL+RK+ + VA L +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFLSER-RGDAGIVYCLSRKKVEEVAEFLGNQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL+++LR Q ++++ +
Sbjct: 255 ALPYHAGLSNELRAHHQKRFLNEE 278
>gi|342879842|gb|EGU81076.1| hypothetical protein FOXB_08424 [Fusarium oxysporum Fo5176]
Length = 1668
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK + V+ + SLI ++Y+ QSGIVY ++RK + VA +L+
Sbjct: 1019 FSQSFNRPNLYYEVRPKTTNEKVMDAISSLIHSRYANQSGIVYTISRKNAEKVAESLSGN 1078
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG + + EVQ W V V
Sbjct: 1079 GITARFYHAGCDPQEKVEVQNSWQRGHVKV 1108
>gi|402492603|ref|ZP_10839363.1| ATP-dependent DNA helicase RecQ [Aquimarina agarilytica ZC1]
Length = 728
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK NV ++I +K + +G+SGI+YCL+RK + +A AL I
Sbjct: 201 FKASFNRPNLFYEVRPKTANVETDIIRFVK-QNTGKSGIIYCLSRKRVEELAQALQVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA+ YHAGL K R + Q ++ V V
Sbjct: 260 NAVPYHAGLDAKTRAKHQDMFLMEDVDV 287
>gi|91204323|emb|CAJ71976.1| strongly similar to ATP-dependent DNA helicase [Candidatus Kuenenia
stuttgartiensis]
Length = 772
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SFNR NL Y+I+PK N +++ ++K + +SGI+YC RK +S+A +L E
Sbjct: 250 FNASFNRKNLFYQIIPKDNPYHQILCVLKER-KKESGIIYCQGRKTVESLAGSLQGEGYR 308
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL+ ++R E Q ++I + +
Sbjct: 309 ALPYHAGLSAEMRTENQERFIREDIEI 335
>gi|447917646|ref|YP_007398214.1| ATP-dependent DNA helicase RecQ [Pseudomonas poae RE*1-1-14]
gi|445201509|gb|AGE26718.1| ATP-dependent DNA helicase RecQ [Pseudomonas poae RE*1-1-14]
Length = 709
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++L+ + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLALLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|426225386|ref|XP_004006847.1| PREDICTED: ATP-dependent DNA helicase Q1 [Ovis aries]
Length = 649
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A SYHA + + + +V +W +N++ V TV
Sbjct: 337 LGIPAGSYHANMEPEDKTKVHRRWSANEIQVVVATV 372
>gi|7505165|pir||T16536 hypothetical protein K02F3.1 - Caenorhabditis elegans
Length = 886
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR+NLKY+++ K +E+ IK ++GQ+GI+YCL+R +C+ VA AL
Sbjct: 672 FRAGFNRSNLKYKVVQKPGSEDECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKS 731
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + R+ WIS K+ V
Sbjct: 732 HGIKAKHYHAYMEPVDRSGAHQGWISGKIQV 762
>gi|6934278|gb|AAF31695.1|AF205407_1 QDE3 protein [Neurospora crassa]
Length = 1955
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-R 58
F SFNR NL YE+ + ++N++ + LIK KY GQ+GI+Y L+RK +++A L ++ R
Sbjct: 1097 FSQSFNRPNLYYEVRMKEQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHR 1156
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + VQ +W + +V V
Sbjct: 1157 IKAKHYHASITTDEKISVQHEWQTGRVKV 1185
>gi|164423365|ref|XP_964030.2| hypothetical protein NCU08598 [Neurospora crassa OR74A]
gi|157070060|gb|EAA34794.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1955
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-R 58
F SFNR NL YE+ + ++N++ + LIK KY GQ+GI+Y L+RK +++A L ++ R
Sbjct: 1097 FSQSFNRPNLYYEVRMKEQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHR 1156
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + VQ +W + +V V
Sbjct: 1157 IKAKHYHASITTDEKISVQHEWQTGRVKV 1185
>gi|428224630|ref|YP_007108727.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
gi|427984531|gb|AFY65675.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
Length = 741
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK KN E++ K ++ S IVYCL+R+ + + L QE I
Sbjct: 211 IASFNRPNLYYEVRPKGKNSYDELLQ--KIRHVEGSCIVYCLSRRRVNELTTRLQQEGIE 268
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL+D +R E Q ++I + V V
Sbjct: 269 ALPYHAGLSDDVRTENQTRFIRDDVRV 295
>gi|71987993|ref|NP_001022656.1| Protein K02F3.12, isoform a [Caenorhabditis elegans]
gi|75024696|sp|Q9TXJ8.3|RECQ1_CAEEL RecName: Full=Putative ATP-dependent DNA helicase Q1
gi|351065878|emb|CCD61879.1| Protein K02F3.12, isoform a [Caenorhabditis elegans]
Length = 631
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR+NLKY+++ K +E+ IK ++GQ+GI+YCL+R +C+ VA AL
Sbjct: 295 FRAGFNRSNLKYKVVQKPGSEDECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKS 354
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + R+ WIS K+ V
Sbjct: 355 HGIKAKHYHAYMEPVDRSGAHQGWISGKIQV 385
>gi|54026456|ref|YP_120698.1| helicase [Nocardia farcinica IFM 10152]
gi|54017964|dbj|BAD59334.1| putative helicase [Nocardia farcinica IFM 10152]
Length = 621
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK ++++ I+ ++ G +GIVYCL+R + AA L + I
Sbjct: 213 FVASFDRPNIQYRIEPKNRAERQLLDFIRTEHPGDAGIVYCLSRNSVEKTAAFLNENGIG 272
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++ R Q +++
Sbjct: 273 AVPYHAGLDNRTRAANQSRFL 293
>gi|399927001|ref|ZP_10784359.1| ATP-dependent DNA helicase RecQ1 [Myroides injenensis M09-0166]
Length = 731
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YEI PK KN+ ++I IK +G+SG++YCL+RK+ + +A L I
Sbjct: 202 FKASFNRPNLFYEIRPKTKNIESDIIRFIKQN-AGKSGVIYCLSRKKVEEIANVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|395764171|ref|ZP_10444840.1| ATP-dependent DNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 607
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ I +++G GIVYCL+RK+ + A L Q I
Sbjct: 200 FVSSFDRPNIRYQIVEKANGRKQLLDFINTEHTGDCGIVYCLSRKKVEETAEFLNQSGIR 259
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ R+ Q +++
Sbjct: 260 ALPYHAGMEYAKRSANQARFL 280
>gi|302926382|ref|XP_003054285.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
gi|256735226|gb|EEU48572.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
Length = 1678
Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK ++ + SL+++KY QSGIVY ++RK + VA +L+Q
Sbjct: 1027 FCQSFNRPNLYYEVRPKTTNDKTIEAIASLVQSKYPNQSGIVYTISRKNAEKVAESLSQH 1086
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + + EVQ W ++ +
Sbjct: 1087 GIAASHYHAHVDPQEKVEVQNAWQRGEIKI 1116
>gi|225010696|ref|ZP_03701166.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
gi|225005249|gb|EEG43201.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
Length = 647
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK +NV ++I +K ++ G+SGI+YCL+RK+ + +A L +
Sbjct: 203 FKSSFNRPNLFYEVRPKTQNVEADIIRFVK-QHVGKSGIIYCLSRKKVEELAQILQVNGV 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAG K R++ Q ++ +V V
Sbjct: 262 SAVPYHAGFDTKTRSKYQDMFLMEEVDV 289
>gi|298209031|ref|YP_003717210.1| ATP-dependent DNA helicase [Croceibacter atlanticus HTCC2559]
gi|83848958|gb|EAP86827.1| putative ATP-dependent DNA helicase [Croceibacter atlanticus
HTCC2559]
Length = 734
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK K V ++I IK K +G+SGI+YCL+RK + +A L I
Sbjct: 203 FKASFNRPNLYYEVRPKTKEVFSDIIRFIK-KRTGKSGIIYCLSRKSVEELAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 262 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 289
>gi|268570477|ref|XP_002640754.1| Hypothetical protein CBG24191 [Caenorhabditis briggsae]
gi|296439745|sp|A8WK63.1|RECQ1_CAEBR RecName: Full=Putative ATP-dependent DNA helicase Q1
Length = 618
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNRANL Y++L K +++++ IK K+SG++GI+YCL+R +C+ +A +L
Sbjct: 272 FRAGFNRANLNYKVLTKPGSEDECVEKIVRTIKRKFSGKTGIIYCLSRNDCEKLAKSLKA 331
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A YHA + R+ KW+S ++ V TV
Sbjct: 332 NGIRAKHYHAYMEPVDRSAAHQKWVSGEIQVIVATV 367
>gi|225011808|ref|ZP_03702246.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
gi|225004311|gb|EEG42283.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
Length = 729
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 14/106 (13%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK V ++I IK SG+SGI+YCL+RK + +A L I
Sbjct: 201 FKASFNRPNLYYEVRPKTGQVDSDIIRFIKQN-SGKSGIIYCLSRKRVEELAQTLQVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
NA+ YHAGL K R Q +++ + +CD + A +A
Sbjct: 260 NALPYHAGLDSKSRVNNQDQFLKD------------DCDVIVATIA 293
>gi|423015908|ref|ZP_17006629.1| ATP-dependent DNA helicase RecQ [Achromobacter xylosoxidans AXX-A]
gi|338780967|gb|EGP45363.1| ATP-dependent DNA helicase RecQ [Achromobacter xylosoxidans AXX-A]
Length = 609
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K V K+++ +I+ ++ G+SG+VY L+R + A L + I+
Sbjct: 197 FVSSFDRPNIRYRIVEKNEVRKQLLEMIRTEHEGESGVVYALSRARVEETAEFLCNQGID 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ ++R Q +++
Sbjct: 257 AMPYHAGLSPQVRAANQARFL 277
>gi|88861126|ref|ZP_01135760.1| ATP-dependent DNA helicase [Pseudoalteromonas tunicata D2]
gi|88816848|gb|EAR26669.1| ATP-dependent DNA helicase [Pseudoalteromonas tunicata D2]
Length = 605
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ SF+R N++Y + K L ++I +KA+ GQSGI+YC +RK D ++A L + N
Sbjct: 204 YTGSFDRPNIRYTLEEKFKPLSQLIRYLKAQ-PGQSGIIYCTSRKRVDEISAKLVEAGFN 262
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL ++ R+ VQ + + +H+
Sbjct: 263 AAAYHAGLENQQRSFVQTAFAKDDIHI 289
>gi|282898834|ref|ZP_06306821.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
gi|281196361|gb|EFA71271.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
Length = 719
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK +N E++ +IK SGI+YCLTRK D + L +I
Sbjct: 202 IASFNRQNLYYEVRPKNRNSYGEILEIIKENEG--SGIIYCLTRKNVDELTLKLQNSQIA 259
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAGL D R + Q ++I + V + T+
Sbjct: 260 ALPYHAGLVDYERAKNQTRFIRDDVRIMVATI 291
>gi|195995715|ref|XP_002107726.1| hypothetical protein TRIADDRAFT_19930 [Trichoplax adhaerens]
gi|190588502|gb|EDV28524.1| hypothetical protein TRIADDRAFT_19930 [Trichoplax adhaerens]
Length = 605
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F S R NL YE+ K + + +++SLI K+ QSGI+YC TRKE ++VA+ L
Sbjct: 266 FRGSMTRVNLIYEVRQKPSSHTDTINDMVSLINDKFRNQSGIIYCCTRKESETVASDLVS 325
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ I+A YHA + R+ V WI NKV+V
Sbjct: 326 KGIHAAFYHADMEMSERSSVHRHWIENKVNV 356
>gi|186683728|ref|YP_001866924.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
gi|186466180|gb|ACC81981.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
Length = 719
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K K+ E++ LI+ S I+YCLTRK+ D + L ++I+
Sbjct: 203 IASFNRQNLYYEVRSKTKSAYAELLELIRENEG--SAIIYCLTRKKVDELTFKLQNDKIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+SYHAGL+D+ R+ Q ++I + V V T+
Sbjct: 261 ALSYHAGLSDEERSSNQTRFIRDDVRVMVATI 292
>gi|404485707|ref|ZP_11020904.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
gi|404338395|gb|EJZ64842.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
Length = 726
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK N+ K++I IK++ G+SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTANIDKDIIKYIKSQ-EGKSGIIYCLSRKKVEELAELLQVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ R + Q ++ K+ V
Sbjct: 260 RALPYHAGMDSATRTQNQDAFLLEKIDV 287
>gi|255557667|ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative [Ricinus communis]
Length = 714
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKY-SGQSGIVYCLTRKECDSVAAALA 55
F+S+ NR NL Y + K K V+ E+ I+ Y + +SGIVYC +RKEC+ VAA L
Sbjct: 282 FVSTVNRPNLFYMVREKSSVGKVVIDEIAEFIRESYPNNESGIVYCFSRKECEQVAADLR 341
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ I+A YHA + R +V M+W NK+ V TV
Sbjct: 342 ERGISADYYHADMDVNAREKVHMRWSQNKLQVIVGTV 378
>gi|430808837|ref|ZP_19435952.1| ATP-dependent DNA helicase RecQ [Cupriavidus sp. HMR-1]
gi|429498733|gb|EKZ97235.1| ATP-dependent DNA helicase RecQ [Cupriavidus sp. HMR-1]
Length = 615
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSG-----QSGIVYCLTRKECDSVAAALA 55
FISSF+R N++Y I+ K N ++++ IKA++ SGIVYCL+RK+ + AA L+
Sbjct: 199 FISSFDRPNIRYRIIEKDNARLQLLAFIKAEHMNATGGHDSGIVYCLSRKKVEDTAAWLS 258
Query: 56 QERINAISYHAGLADKLRNEVQMKW 80
INA+ YHAG+ ++R Q ++
Sbjct: 259 SHGINALGYHAGMDSQVRQTHQARF 283
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK + +GIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKG--AGIVYCISRKTVDKVAEQLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+ Q ++I + V + T+
Sbjct: 261 ALPYHAGMEDRERSNNQTRFIRDDVQIMVATI 292
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK + +GIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKG--AGIVYCISRKTVDKVAEQLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+ Q ++I + V + T+
Sbjct: 261 ALPYHAGMEDRERSNNQTRFIRDDVQIMVATI 292
>gi|381153488|ref|ZP_09865357.1| ATP-dependent DNA helicase RecQ [Methylomicrobium album BG8]
gi|380885460|gb|EIC31337.1| ATP-dependent DNA helicase RecQ [Methylomicrobium album BG8]
Length = 707
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F F+R N++Y I+ K+N K+++ I+A++ G +GIVYCL+RK+ + A LA +
Sbjct: 196 FQRGFDRPNIRYRIVQKQNARKQLLDFIRAEHDGDAGIVYCLSRKKVEETAVWLAAQGFK 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+A R Q +++
Sbjct: 256 ALPYHAGMAAPARQHNQHRFL 276
>gi|452747807|ref|ZP_21947599.1| ATP-dependent DNA helicase RecQ, partial [Pseudomonas stutzeri
NF13]
gi|452008370|gb|EME00611.1| ATP-dependent DNA helicase RecQ, partial [Pseudomonas stutzeri
NF13]
Length = 623
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|441144624|ref|ZP_20963433.1| ATP-dependent DNA helicase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440621521|gb|ELQ84482.1| ATP-dependent DNA helicase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 656
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I K + K+++ L++ +++G +GIVYCL+R + A L Q I
Sbjct: 206 FVASFDRPNIQYRIAGKSDPKKQLLELLRTEHAGDAGIVYCLSRASVEKTAEFLVQNGIT 265
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R E Q +++
Sbjct: 266 ALPYHAGLEARTRAEHQARFL 286
>gi|392421673|ref|YP_006458277.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri CCUG 29243]
gi|390983861|gb|AFM33854.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri CCUG 29243]
Length = 707
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|119488495|ref|ZP_01621668.1| ATP-dependent DNA helicase RecQ [Lyngbya sp. PCC 8106]
gi|119455306|gb|EAW36446.1| ATP-dependent DNA helicase RecQ [Lyngbya sp. PCC 8106]
Length = 335
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SF R NL YE++PK + K+++ +I+ +G SGI+YCLTRK + +A L ++ I
Sbjct: 211 IASFLRPNLYYEVIPKHTHSFKQLLKIIQQ--AGGSGIIYCLTRKRVEYLAFKLREKGIP 268
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ YH GL D+ R E Q+++I + V V TV
Sbjct: 269 CLPYHGGLPDEERRENQIRFIRDDVEVMVATV 300
>gi|114332470|ref|YP_748692.1| ATP-dependent DNA helicase RecQ [Nitrosomonas eutropha C91]
gi|114309484|gb|ABI60727.1| ATP-dependent DNA helicase RecQ [Nitrosomonas eutropha C91]
Length = 539
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R NL Y I + N +++++ I+ ++ G++GIVYC +RK+ + AA L I
Sbjct: 199 FISSFDRPNLCYRITARSNSRRQLLNFIRNQHPGEAGIVYCQSRKKTEETAAWLNANHIP 258
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ +R + Q K++
Sbjct: 259 ALAYHAGMETPVRTQHQKKFL 279
>gi|67523261|ref|XP_659691.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|8101762|gb|AAF72650.1|AF259396_1 RecQ helicase MUSN [Emericella nidulans]
gi|40745763|gb|EAA64919.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|259487457|tpe|CBF86151.1| TPA: Putative uncharacterized proteinRecQ helicase MUSN ;
[Source:UniProtKB/TrEMBL;Acc:Q9P8H3] [Aspergillus
nidulans FGSC A4]
Length = 1534
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQ 56
F SFNR NL YE+ K +L + IK+ Y + GIVYCL+R C+ VA AL
Sbjct: 892 FTQSFNRPNLTYEVRRKGKHAELLDSIADTIKSTYRNKCGIVYCLSRNTCEKVAEALRTN 951
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R Q +W + VHV
Sbjct: 952 YSIKAEHYHAGLDAETRARTQQRWQAGDVHV 982
>gi|255725388|ref|XP_002547623.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
gi|240135514|gb|EER35068.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
Length = 1227
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YEI L +++ LKE+ I K+ Q+GI+YC +++ C+ +A L + +
Sbjct: 814 SFNRTNLFYEIRLKQRDFLKEIKDYIMEKHPNQTGIIYCHSKQSCEQTSAKLNEYGLRTS 873
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG++ + R ++Q W +NK+ V
Sbjct: 874 FYHAGMSTEDRYKIQTNWQNNKIQV 898
>gi|392944201|ref|ZP_10309843.1| ATP-dependent DNA helicase RecQ [Frankia sp. QA3]
gi|392287495|gb|EIV93519.1| ATP-dependent DNA helicase RecQ [Frankia sp. QA3]
Length = 645
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 55/80 (68%)
Query: 2 ISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
+++F+R N++Y I PKK +++ L++ ++ G +GIVYCL+R + +A LA + I A
Sbjct: 221 VANFDRPNIQYRIAPKKEPKAQLLHLLRTEHPGDAGIVYCLSRASVEKIAEFLAGQGIPA 280
Query: 62 ISYHAGLADKLRNEVQMKWI 81
+ YHAGL +++R E Q +++
Sbjct: 281 LPYHAGLDNRVRAENQARFL 300
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 3 SSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
+SFNR NL YE+ PK + +++ IK + SGIVYC++RK D VA L ++ I+A
Sbjct: 204 ASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKG--SGIVYCISRKTVDKVAEQLQKDGIDA 261
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ YHAG+ D+ R+E Q ++I + V + T+
Sbjct: 262 LPYHAGMDDRERSENQTRFIRDDVQIMVATI 292
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK + +GIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKG--AGIVYCISRKTVDKVAEQLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+ Q ++I + V + T+
Sbjct: 261 ALPYHAGMEDRERSNNQTRFIRDDVQIMVATI 292
>gi|422322807|ref|ZP_16403847.1| ATP-dependent DNA helicase [Achromobacter xylosoxidans C54]
gi|317402236|gb|EFV82824.1| ATP-dependent DNA helicase [Achromobacter xylosoxidans C54]
Length = 609
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K V K+++ +I+ ++ G+SG+VY L+R + A L + I+
Sbjct: 197 FVSSFDRPNIRYRIVEKNEVRKQLLDMIRTEHEGESGVVYALSRARVEETAEFLCNQGID 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ ++R Q +++
Sbjct: 257 AMPYHAGLSPQVRAANQARFL 277
>gi|242071927|ref|XP_002451240.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
gi|241937083|gb|EES10228.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
Length = 624
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NL YE++ K K K++ L+K ++ +SGIVYCL++ EC A L ++ +I
Sbjct: 414 SFDRLNLNYEVIGKTKTPQKQLGDLLKERFMNKSGIVYCLSKNECADTAKFLREKYKIKC 473
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
YHAGLA + R VQ KW S +V V
Sbjct: 474 AHYHAGLAARQRTSVQEKWHSGEVKV 499
>gi|399018929|ref|ZP_10721080.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. CF444]
gi|398098859|gb|EJL89138.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. CF444]
Length = 614
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ I+++++ +G+VYCL+RK+ + A L Q IN
Sbjct: 207 FVSSFDRPNIRYQIVEKANGRKQLLDFIESEHADDAGVVYCLSRKKVEETAEFLKQSGIN 266
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG+ R Q +++
Sbjct: 267 ALPYHAGMDYAKRTANQARFL 287
>gi|260062261|ref|YP_003195341.1| ATP-dependent DNA helicase [Robiginitalea biformata HTCC2501]
gi|88783823|gb|EAR14994.1| putative ATP-dependent DNA helicase [Robiginitalea biformata
HTCC2501]
Length = 733
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK KNV ++I +K K +G+SGI+YCL+RK + +A L +
Sbjct: 203 FKASFNRPNLYYEVQPKTKNVDADIIRFVK-KNAGKSGIIYCLSRKRVEELAQVLQVNGV 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAG K R+ Q ++ +V V
Sbjct: 262 SAVPYHAGFDAKTRSRYQDMFLMEEVDV 289
>gi|443925918|gb|ELU44675.1| RecQ type DNA helicase Rqh1 [Rhizoctonia solani AG-1 IA]
Length = 1389
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER- 58
+ SFNR NL YE+ K K V+ ++ + I+A Y +SG++YCL+R +C+ VA L ++
Sbjct: 787 LVQSFNRPNLHYEVRKKGKGVVADIANYIRAHYHEKSGVIYCLSRAKCEDVANELREKHG 846
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVA 101
I+A YHA + + E Q WIS + +V +V+ DS++
Sbjct: 847 ISARHYHAAMTVSDKTETQAAWISGECNV----IVATVSDSLS 885
>gi|148226526|ref|NP_001089858.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus laevis]
gi|80476410|gb|AAI08556.1| MGC131022 protein [Xenopus laevis]
Length = 652
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ + ++ LI ++Y GQSGI+YC ++K+ + V +L +
Sbjct: 279 FTASFNRPNLFYEVRLKPSSSEDFIADITKLINSRYKGQSGIIYCFSQKDSEQVTMSLQK 338
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + +++V KW +N++ + TV
Sbjct: 339 LGIRAGAYHANMEPRDKSKVHTKWTANEIQIVVATV 374
>gi|423346935|ref|ZP_17324622.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
gi|409218596|gb|EKN11564.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
Length = 726
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YEI PK N+ +E+I IK+ G+SGI+YCL+RK+ + A L I
Sbjct: 201 FKSSFNRSNLYYEIRPKTANIDREIIKYIKSN-EGKSGIIYCLSRKKVEEFADILKANGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ + R+ Q ++ K V
Sbjct: 260 KALPYHAGMDSQQRSSNQDAFLMEKADV 287
>gi|89899271|ref|YP_521742.1| ATP-dependent DNA helicase RecQ [Rhodoferax ferrireducens T118]
gi|89344008|gb|ABD68211.1| ATP-dependent DNA helicase RecQ [Rhodoferax ferrireducens T118]
Length = 618
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 55/84 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y I+ K++ ++++ I +++ G +GIVYC +RK + +A L E I
Sbjct: 204 FISSFDRPNISYTIVEKRDATQQLLRFITSEHMGDAGIVYCQSRKRVEDIANLLCDEGIA 263
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL K+R Q +++ ++
Sbjct: 264 ALPYHAGLEAKVRQANQDQFLRSE 287
>gi|15806307|ref|NP_295013.1| DNA helicase RecQ [Deinococcus radiodurans R1]
gi|6459036|gb|AAF10859.1|AE001976_2 DNA helicase RecQ [Deinococcus radiodurans R1]
Length = 824
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 56/84 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y + K + +++ I+ ++ G +GIVYCL+RK + A L + I+
Sbjct: 203 FVSSFDRPNIQYRVGLKDSPKTQLLHFIREEHPGDAGIVYCLSRKSVEETAKWLQAQGID 262
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A++YHAGL+ RN VQ ++++ +
Sbjct: 263 ALAYHAGLSSTERNNVQERFLNEE 286
>gi|423725451|ref|ZP_17699588.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
gi|409234575|gb|EKN27403.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
Length = 726
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YEI PK N+ +E+I IK+ G+SGI+YCL+RK+ + A L I
Sbjct: 201 FKSSFNRSNLYYEIRPKTANIDREIIKYIKSN-EGKSGIIYCLSRKKVEEFADILKANGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ + R+ Q ++ K V
Sbjct: 260 KALPYHAGMDSQQRSSNQDAFLMEKADV 287
>gi|390954980|ref|YP_006418738.1| RecQ familyATP-dependent DNA helicase [Aequorivita sublithincola
DSM 14238]
gi|390420966|gb|AFL81723.1| ATP-dependent DNA helicase, RecQ family [Aequorivita sublithincola
DSM 14238]
Length = 730
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YEI PK KNV ++I +K G++GI+YCL+RK + +A AL I
Sbjct: 201 FKASFNRPNLYYEIRPKTKNVDSDIIRFVKQN-EGKTGIIYCLSRKRVEELAQALQVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R + Q ++ V V
Sbjct: 260 KAVPYHAGLDGKTRVKHQDMFLMEDVDV 287
>gi|425461242|ref|ZP_18840722.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
gi|389825935|emb|CCI23927.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
Length = 701
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K + +++ IK K SGIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVRAKTSKSYQQLYQYIKGKKG--SGIVYCISRKTVDQVAEHLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+E Q ++I + V + T+
Sbjct: 261 ALPYHAGMNDQERSENQTRFIRDDVQIMVATI 292
>gi|358679347|ref|NP_001240636.1| ATP-dependent DNA helicase Q1 [Sus scrofa]
Length = 649
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + V +W +N++ V TV
Sbjct: 337 LGIHAGAYHANMEPEDKTTVHRRWSANEIQVVVATV 372
>gi|218262311|ref|ZP_03476825.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
gi|218223462|gb|EEC96112.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
Length = 729
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YEI PK N+ +E+I IK+ G+SGI+YCL+RK+ + A L I
Sbjct: 204 FKSSFNRSNLYYEIRPKTANIDREIIKYIKSN-EGKSGIIYCLSRKKVEEFADILKANGI 262
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ + R+ Q ++ K V
Sbjct: 263 KALPYHAGMDSQQRSSNQDAFLMEKADV 290
>gi|423343078|ref|ZP_17320792.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
gi|409216754|gb|EKN09737.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
Length = 726
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YEI PK N+ +E+I IK+ G+SGI+YCL+RK+ + A L I
Sbjct: 201 FKSSFNRSNLYYEIRPKTANIDREIIKYIKSN-EGKSGIIYCLSRKKVEEFADILKANGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ + R+ Q ++ K V
Sbjct: 260 KALPYHAGMDSQQRSSNQDAFLMEKADV 287
>gi|354604692|ref|ZP_09022681.1| ATP-dependent DNA helicase RecQ [Alistipes indistinctus YIT 12060]
gi|353347271|gb|EHB91547.1| ATP-dependent DNA helicase RecQ [Alistipes indistinctus YIT 12060]
Length = 730
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ K N KE+I IK+ G+SGI+YCL+RK+ + +A LA I
Sbjct: 203 FKSSFNRPNLFYEVRSKTNATKEIIRYIKSN-PGKSGIIYCLSRKKVEELAELLAANSIK 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R Q +++ KV V
Sbjct: 262 VAPYHAGMDAVTRAANQDAFLNEKVDV 288
>gi|288929614|ref|ZP_06423458.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329119|gb|EFC67706.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 317 str.
F0108]
Length = 725
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PK ++ I + +++G+SGI+YCL+RK+ + ++A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTQEVERNIIMFIRQHAGKSGIIYCLSRKKVEELSAILKANNIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 261 AEPYHAGLDSATRSQTQDDFLMERIDV 287
>gi|154494364|ref|ZP_02033684.1| hypothetical protein PARMER_03719 [Parabacteroides merdae ATCC
43184]
gi|154085808|gb|EDN84853.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae ATCC 43184]
Length = 729
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YEI PK N+ +E+I IK+ G+SGI+YCL+RK+ + A L I
Sbjct: 204 FKSSFNRSNLYYEIRPKTANIDREIIKYIKSN-EGKSGIIYCLSRKKVEEFADILKANGI 262
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ + R+ Q ++ K V
Sbjct: 263 KALPYHAGMDSQQRSSNQDAFLMEKADV 290
>gi|336321864|ref|YP_004601832.1| ATP-dependent DNA helicase RecQ [[Cellvibrio] gilvus ATCC 13127]
gi|336105445|gb|AEI13264.1| ATP-dependent DNA helicase RecQ [[Cellvibrio] gilvus ATCC 13127]
Length = 683
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK N +++ L++ ++ G SGIVYCL+R + A L + ++
Sbjct: 271 FVASFDRPNIQYRIAPKDNPRAQLLELLRTEHPGDSGIVYCLSRASVEQTAEYLVGQGVD 330
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 331 AMPYHAGLDRQVRAHNQSRFL 351
>gi|350295161|gb|EGZ76138.1| hypothetical protein NEUTE2DRAFT_97732 [Neurospora tetrasperma FGSC
2509]
Length = 1994
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-R 58
F SFNR NL YE+ + ++N++ + LIK KY GQ+GI+Y L+RK +++A L ++ R
Sbjct: 1131 FSQSFNRPNLYYEVRMKEQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHR 1190
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + VQ +W + +V V
Sbjct: 1191 IKAKHYHASITTDEKISVQHEWQTGQVKV 1219
>gi|336465540|gb|EGO53780.1| hypothetical protein NEUTE1DRAFT_93386 [Neurospora tetrasperma FGSC
2508]
Length = 2005
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-R 58
F SFNR NL YE+ + ++N++ + LIK KY GQ+GI+Y L+RK +++A L ++ R
Sbjct: 1142 FSQSFNRPNLYYEVRMKEQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHR 1201
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + VQ +W + +V V
Sbjct: 1202 IKAKHYHASITTDEKISVQHEWQTGQVKV 1230
>gi|302868793|ref|YP_003837430.1| ATP-dependent DNA helicase RecQ [Micromonospora aurantiaca ATCC
27029]
gi|302571652|gb|ADL47854.1| ATP-dependent DNA helicase RecQ [Micromonospora aurantiaca ATCC
27029]
Length = 618
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK+ ++++SL++ ++SG +GIVYCL+R + A L I
Sbjct: 208 FVASFDRPNIQYRIVPKREPRRQLLSLLRDEHSGDAGIVYCLSRASVEKTAEFLVANGIP 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 268 ALPYHAGLDASTRAANQQRFL 288
>gi|124265301|ref|YP_001019305.1| ATP-dependent DNA helicase RecQ [Methylibium petroleiphilum PM1]
gi|124258076|gb|ABM93070.1| ATP-dependent DNA helicase RecQ [Methylibium petroleiphilum PM1]
Length = 595
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y ++ K + K+++ I ++ G +GIVYC +RK+ D AA L E I
Sbjct: 176 FISSFDRPNIRYRVVEKDDPRKQLLRFIGDEHEGDAGIVYCQSRKKVDETAAWLETEGIT 235
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 236 ALPYHAGLDAAVRQRHQNRFL 256
>gi|17227701|ref|NP_484249.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
gi|17135183|dbj|BAB77729.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
Length = 718
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SFNR NL YE+ PK K E++ LI+ S I+YCLTRK+ + + L +++I+
Sbjct: 203 LASFNRQNLYYEVRPKSKQAYAELLELIRDNEG--STIIYCLTRKKVEELTFKLQKDKIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+SYHAGL D R++ Q ++I + V V T+
Sbjct: 261 ALSYHAGLPDDERSKNQTRFIRDDVRVMVATI 292
>gi|395801803|ref|ZP_10481058.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395435992|gb|EJG01931.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 731
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K KN+ ++I IK ++ G+SGI+YCL+RK+ +S+A L I
Sbjct: 202 FKASFNRPNLYYEVRTKTKNIESDIIRFIK-QHKGKSGIIYCLSRKKVESIAEVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|223558023|gb|ACM91029.1| ATP-dependent DNA helicase RecQ [uncultured bacterium URE4]
Length = 731
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ K + K++I I+ + G+SGI+YCL+RK+ + +A L+ I
Sbjct: 203 FKSSFNRPNLYYEVRDKVDTEKDIIRFIR-QNPGKSGIIYCLSRKKVEELAQLLSINGIQ 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R E Q +++ + V
Sbjct: 262 ALPYHAGLDAKTRAENQDRFLMEDIQV 288
>gi|440733531|ref|ZP_20913242.1| DNA helicase superfamily II protein [Xanthomonas translucens
DAR61454]
gi|440360758|gb|ELP98016.1| DNA helicase superfamily II protein [Xanthomonas translucens
DAR61454]
Length = 602
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K+N ++++ ++A + G +GIVYC++R++ + A LA+E +N
Sbjct: 196 FVSSFDRPNIRYTVVQKENSKRQLLDFLRA-HRGSAGIVYCMSRRKVEETAEFLAKEGLN 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 255 ALPYHAGLPAEVRAGNQRRFL 275
>gi|115486585|ref|NP_001068436.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|77552472|gb|ABA95269.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|113645658|dbj|BAF28799.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|125535256|gb|EAY81804.1| hypothetical protein OsI_36975 [Oryza sativa Indica Group]
gi|125568785|gb|EAZ10300.1| hypothetical protein OsJ_00135 [Oryza sativa Japonica Group]
Length = 588
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NL YE++ K K K++ L+K ++ SGIVYCL++ EC A L ++ +I
Sbjct: 376 SFDRTNLNYEVIGKTKTPQKQLGDLLKERFMNMSGIVYCLSKNECADTAKFLREKYKIKC 435
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
YHAGLA + R+ VQ KW S +V V
Sbjct: 436 AHYHAGLAARQRSNVQGKWHSGEVKV 461
>gi|395796604|ref|ZP_10475899.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. Ag1]
gi|421141379|ref|ZP_15601364.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens BBc6R8]
gi|395339168|gb|EJF71014.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. Ag1]
gi|404507388|gb|EKA21373.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens BBc6R8]
Length = 708
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSDRRS-DAGIVYCLSRKKVDEVAAFLSEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|298372729|ref|ZP_06982719.1| ATP-dependent DNA helicase RecQ [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275633|gb|EFI17184.1| ATP-dependent DNA helicase RecQ [Bacteroidetes oral taxon 274 str.
F0058]
Length = 726
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 14/106 (13%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK +N+ K++I IK++ +SGIVYCL+RK + +A +L I
Sbjct: 197 FKSSFNRENLYYEVRPKTQNIEKDIIKYIKSQ-GRKSGIVYCLSRKRVEELAESLCLNGI 255
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
+A+ YHAGL +R++ Q ++ K CD + A +A
Sbjct: 256 SALPYHAGLDAAVRSQNQDFFLMEK------------CDVIVATIA 289
>gi|443668675|ref|ZP_21134223.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
gi|159029588|emb|CAO90247.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330750|gb|ELS45444.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
Length = 701
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K + +++ IK K SGIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVRAKTSKSYQQLYQYIKGKKG--SGIVYCISRKTVDQVAEHLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+E Q ++I + V + T+
Sbjct: 261 ALPYHAGMNDQERSENQTRFIRDDVQIMVATI 292
>gi|315223920|ref|ZP_07865765.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
gi|314946092|gb|EFS98096.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
Length = 729
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + S +SGI+YCL+RK+ + +A L I
Sbjct: 203 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNSKKSGIIYCLSRKKVEDLAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 262 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 289
>gi|256820777|ref|YP_003142056.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429746398|ref|ZP_19279750.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429756068|ref|ZP_19288682.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|256582360|gb|ACU93495.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429166284|gb|EKY08277.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429172170|gb|EKY13749.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 729
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + S +SGI+YCL+RK+ + +A L I
Sbjct: 203 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNSKKSGIIYCLSRKKVEDLAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 262 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 289
>gi|408480633|ref|ZP_11186852.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. R81]
Length = 708
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R+N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|393779596|ref|ZP_10367834.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392609916|gb|EIW92711.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 727
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + S +SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNSKKSGIIYCLSRKKVEDLAQTLQVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 260 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 287
>gi|86133525|ref|ZP_01052107.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85820388|gb|EAQ41535.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 727
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 14/106 (13%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK K V K++I +K + G+SGI+YCL+RK+ + +A L I
Sbjct: 197 FKASFNRPNLFYEVRPKTKEVEKDIIRFVKQR-EGKSGIIYCLSRKKVEEIAQILQVNGI 255
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL K R + Q ++ ++CD V A +A
Sbjct: 256 KAVPYHAGLDAKTRVKHQDMFL------------MEDCDVVVATIA 289
>gi|429753766|ref|ZP_19286544.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429171815|gb|EKY13407.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 729
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + S +SGI+YCL+RK+ + +A L I
Sbjct: 203 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNSKKSGIIYCLSRKKVEDLAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 262 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 289
>gi|418466475|ref|ZP_13037395.1| helicase [Streptomyces coelicoflavus ZG0656]
gi|371552896|gb|EHN80124.1| helicase [Streptomyces coelicoflavus ZG0656]
Length = 676
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y ++PK + K+++S ++ ++SG +GIVYCL+R + A L++ +
Sbjct: 216 FVASFDRPNIQYRVVPKSDPKKQLLSFLREEHSGDAGIVYCLSRNSVEKTAEFLSRNGVE 275
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 276 AVPYHAGLDAGTRAAHQSRFL 296
>gi|420158748|ref|ZP_14665562.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
gi|394763235|gb|EJF45355.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
Length = 727
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + S +SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNSKKSGIIYCLSRKKVEDLAQTLQVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 260 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 287
>gi|219853011|ref|YP_002467443.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
gi|219547270|gb|ACL17720.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
Length = 606
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+ SFNR NL Y ++ KKN +++ + +++ +SGI+YC+++KE + VA L + N
Sbjct: 195 FVGSFNRKNLMYRVVEKKNPKILLLTFL-SRHQHESGIIYCMSKKETEEVARDLRRRGYN 253
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL+ ++R +VQ +I N + +
Sbjct: 254 AQAYHAGLSKQVRTKVQDGFIKNTITI 280
>gi|398806409|ref|ZP_10565317.1| ATP-dependent DNA helicase RecQ [Polaromonas sp. CF318]
gi|398088326|gb|EJL78892.1| ATP-dependent DNA helicase RecQ [Polaromonas sp. CF318]
Length = 627
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K + ++++ I+ ++ G++GIVYC +RK + +A L +
Sbjct: 211 FVSSFDRPNIRYTIVEKTDPTRQLLRFIETEHEGEAGIVYCQSRKRVEEIAGMLQDAGLK 270
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAGL LR + Q +++
Sbjct: 271 ALAYHAGLDSALRQQRQDRFL 291
>gi|420149707|ref|ZP_14656877.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394753188|gb|EJF36768.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 732
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + S +SGI+YCL+RK+ + +A L I
Sbjct: 206 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNSKKSGIIYCLSRKKVEDLAQTLQVNGI 264
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 265 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 292
>gi|213962479|ref|ZP_03390741.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
gi|213954805|gb|EEB66125.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
Length = 727
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + S +SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNSKKSGIIYCLSRKKVEDLAQTLQVNGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 260 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 287
>gi|398809293|ref|ZP_10568144.1| ATP-dependent DNA helicase RecQ [Variovorax sp. CF313]
gi|398086072|gb|EJL76709.1| ATP-dependent DNA helicase RecQ [Variovorax sp. CF313]
Length = 717
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ KK+ +++ I+ ++ G +G+VYC +RK + VA L IN
Sbjct: 303 FVSSFDRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVMLRDAGIN 362
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R + Q +++
Sbjct: 363 ALPYHAGLDAAVRQKHQDRFL 383
>gi|313149548|ref|ZP_07811741.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313138315|gb|EFR55675.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 734
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK +NV K++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 209 FKSSFNRPNLYYEVRPKTQNVDKDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 267
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 268 NARAYHAGMDSATRTQNQDNFLMEKIDV 295
>gi|192360216|ref|YP_001980649.1| ATP-dependent DNA helicase RecQ [Cellvibrio japonicus Ueda107]
gi|190686381|gb|ACE84059.1| ATP-dependent DNA helicase RecQ [Cellvibrio japonicus Ueda107]
Length = 608
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FIS F+R N++Y I K N +++ ++ + +G SGIVYCL+R + + +A L E N
Sbjct: 202 FISGFDRPNIQYRIAQKNNPKIQLMRFLREEQAGNSGIVYCLSRNKVEQIAEWLCSEGFN 261
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R + Q K++
Sbjct: 262 ALPYHAGLSASIRQQHQEKFL 282
>gi|423280579|ref|ZP_17259491.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|424665170|ref|ZP_18102206.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404575034|gb|EKA79779.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404583786|gb|EKA88459.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 726
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK +NV K++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTQNVDKDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 260 NARAYHAGMDSATRTQNQDNFLMEKIDV 287
>gi|53715360|ref|YP_101352.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60683329|ref|YP_213473.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|265767847|ref|ZP_06095379.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|336412096|ref|ZP_08592554.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|375360137|ref|YP_005112909.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|383119914|ref|ZP_09940651.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|423252209|ref|ZP_17233211.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423252529|ref|ZP_17233460.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|423261243|ref|ZP_17242144.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267768|ref|ZP_17246748.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|423272323|ref|ZP_17251291.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423276779|ref|ZP_17255711.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|423283055|ref|ZP_17261940.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|52218225|dbj|BAD50818.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60494763|emb|CAH09569.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
gi|251944080|gb|EES84599.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|263252519|gb|EEZ24047.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|301164818|emb|CBW24378.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|335939268|gb|EGN01145.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|387774395|gb|EIK36507.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392647821|gb|EIY41518.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392660605|gb|EIY54214.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|392695515|gb|EIY88727.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392695991|gb|EIY89195.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392696027|gb|EIY89229.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|404581329|gb|EKA86028.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 726
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK +NV K++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRPKTQNVDKDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 260 NARAYHAGMDSATRTQNQDDFLMEKIDV 287
>gi|113476788|ref|YP_722849.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
gi|110167836|gb|ABG52376.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
Length = 731
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 2 ISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
I+SF R+NL YE+ K KN E++ +I+ G SGIVYC +RK D +A L Q
Sbjct: 210 IASFFRSNLYYEVRQKTSAKNTFAEILQIIRT--IGGSGIVYCNSRKRVDEIAYKLRQNN 267
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
++A++YHAG+ D+ R Q K+I + V V TV
Sbjct: 268 VSALAYHAGMTDEERTTNQTKFIRDDVDVIVATV 301
>gi|440908097|gb|ELR58155.1| ATP-dependent DNA helicase Q1, partial [Bos grunniens mutus]
Length = 649
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIPAGAYHANMEPEDKTKVHRRWAANEIQVVVATV 372
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK + SGIVYC++RK D VA L ++ I+
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKG--SGIVYCISRKTVDKVAEQLQKDGID 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ D+ R+E Q ++I + V +
Sbjct: 261 ALPYHAGMDDRERSENQTRFIRDDVQI 287
>gi|351704749|gb|EHB07668.1| ATP-dependent DNA helicase Q1 [Heterocephalus glaber]
Length = 677
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 312 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQK 371
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 372 LGIHAGAYHANMEPEDKTKVHTRWSANELQVVVATV 407
>gi|225023180|ref|ZP_03712372.1| hypothetical protein EIKCOROL_00032 [Eikenella corrodens ATCC
23834]
gi|224944004|gb|EEG25213.1| hypothetical protein EIKCOROL_00032 [Eikenella corrodens ATCC
23834]
Length = 610
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+I+SF+R N+ Y+I+ K N K+++ + ++ G+SGIVYCL+RK+ + AA L +
Sbjct: 197 YIASFDRPNIYYQIIEKNNGKKQLLDFLHSRPHGESGIVYCLSRKKVEDTAAFLNEHGYR 256
Query: 61 AISYHAGLADKLRNEVQMKW 80
A+ YHAGL RNE Q ++
Sbjct: 257 ALPYHAGLTMTERNENQHRF 276
>gi|118151080|ref|NP_001071459.1| ATP-dependent DNA helicase Q1 [Bos taurus]
gi|117306200|gb|AAI26496.1| RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
gi|296487303|tpg|DAA29416.1| TPA: RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
Length = 649
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIPAGAYHANMEPEDKTKVHRRWAANEIQVVVATV 372
>gi|440468642|gb|ELQ37793.1| RecQ helicase MUSN [Magnaporthe oryzae Y34]
gi|440478855|gb|ELQ59654.1| RecQ helicase MUSN [Magnaporthe oryzae P131]
Length = 1780
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER- 58
F SFNR NL Y++ PK KN+L+ + LI+ +++ Q+GI+Y L RK +++A L Q
Sbjct: 1064 FSQSFNRPNLYYDVRPKGKNLLQSIAELIQERHADQTGIIYTLARKSSENIAKKLVQTYG 1123
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A +YHAG+ + ++Q KW + V
Sbjct: 1124 ISAEAYHAGMETDKKTDIQRKWQRGTIKV 1152
>gi|409397559|ref|ZP_11248426.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. Chol1]
gi|409118014|gb|EKM94439.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. Chol1]
Length = 708
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|421485499|ref|ZP_15933058.1| ATP-dependent DNA helicase [Achromobacter piechaudii HLE]
gi|400196418|gb|EJO29395.1| ATP-dependent DNA helicase [Achromobacter piechaudii HLE]
Length = 609
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K V K+++ +I+ ++ G+SG+VY L+R + A L + I+
Sbjct: 197 FVSSFDRPNIRYRIIEKNEVRKQLLDMIRTEHEGESGVVYGLSRARVEETAEFLCNQGID 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ ++R Q +++
Sbjct: 257 AMPYHAGLSPQVRAANQARFL 277
>gi|419956215|ref|ZP_14472323.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri TS44]
gi|387966982|gb|EIK51299.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri TS44]
Length = 708
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|339494444|ref|YP_004714737.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338801816|gb|AEJ05648.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 707
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|386021174|ref|YP_005939198.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri DSM 4166]
gi|327481146|gb|AEA84456.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri DSM 4166]
Length = 707
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|339243055|ref|XP_003377453.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
gi|316973743|gb|EFV57302.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
Length = 605
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL Y++ K + +L+ V L+K ++SGQSGI+YC ++K+ ++ A L
Sbjct: 274 FRASFNRPNLFYQVQQKPDRPEELLQIVCKLLKGQFSGQSGIIYCFSKKDSETFAQNLRT 333
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ A YHA + R V KW+SNK V TV
Sbjct: 334 NGVKAEHYHADMDPNERGMVHRKWLSNKCQVIVATV 369
>gi|238883901|gb|EEQ47539.1| hypothetical protein CAWG_06119 [Candida albicans WO-1]
Length = 1195
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YEI L K N L E+ I +++SG+SGI+YC +++ C+ + L + +
Sbjct: 662 SFNRTNLFYEIKLKKSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTS 721
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG++ R +Q +W NK+ V
Sbjct: 722 FYHAGMSADKRFNIQKRWQENKIQV 746
>gi|146282808|ref|YP_001172961.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri A1501]
gi|145571013|gb|ABP80119.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri A1501]
Length = 707
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|389625891|ref|XP_003710599.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
gi|351650128|gb|EHA57987.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
Length = 1780
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER- 58
F SFNR NL Y++ PK KN+L+ + LI+ +++ Q+GI+Y L RK +++A L Q
Sbjct: 1064 FSQSFNRPNLYYDVRPKGKNLLQSIAELIQERHADQTGIIYTLARKSSENIAKKLVQTYG 1123
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A +YHAG+ + ++Q KW + V
Sbjct: 1124 ISAEAYHAGMETDKKTDIQRKWQRGTIKV 1152
>gi|21222960|ref|NP_628739.1| helicase [Streptomyces coelicolor A3(2)]
gi|5042262|emb|CAB44516.1| putative helicase [Streptomyces coelicolor A3(2)]
Length = 676
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y ++PK + K+++S ++ ++ G +GIVYCL+R D A L++ +
Sbjct: 214 FVASFDRPNIQYRVVPKSDPKKQLLSFLREEHPGDAGIVYCLSRNSVDKTAEFLSRNGVE 273
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 274 AVPYHAGLDAGTRAAHQSRFL 294
>gi|289769819|ref|ZP_06529197.1| ATP-dependent DNA helicase RecQ [Streptomyces lividans TK24]
gi|289700018|gb|EFD67447.1| ATP-dependent DNA helicase RecQ [Streptomyces lividans TK24]
Length = 667
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y ++PK + K+++S ++ ++ G +GIVYCL+R D A L++ +
Sbjct: 205 FVASFDRPNIQYRVVPKSDPKKQLLSFLREEHPGDAGIVYCLSRNSVDKTAEFLSRNGVE 264
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 265 AVPYHAGLDAGTRAAHQSRFL 285
>gi|399009305|ref|ZP_10711744.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM17]
gi|425898170|ref|ZP_18874761.1| ATP-dependent DNA helicase RecQ [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397891744|gb|EJL08222.1| ATP-dependent DNA helicase RecQ [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398112728|gb|EJM02583.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM17]
Length = 708
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL +LR Q ++++ +
Sbjct: 255 ALPYHAGLPSELRAYHQKRFLNEE 278
>gi|389685009|ref|ZP_10176333.1| ATP-dependent DNA helicase RecQ [Pseudomonas chlororaphis O6]
gi|388550662|gb|EIM13931.1| ATP-dependent DNA helicase RecQ [Pseudomonas chlororaphis O6]
Length = 708
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL +LR Q ++++ +
Sbjct: 255 ALPYHAGLPSELRAYHQKRFLNEE 278
>gi|366995175|ref|XP_003677351.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
gi|342303220|emb|CCC70998.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
Length = 989
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K K+ + E+ IK +++GQSGI+YC ++ C+ V+A L ++I +
Sbjct: 541 SFNRINLFYEVRKKTKDCMVEIADAIKFQFTGQSGIIYCHSKNSCEQVSAYLQSKQIRSG 600
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R +Q W +NK+ V
Sbjct: 601 FYHAGMDANERLMIQQDWQANKLQV 625
>gi|390945503|ref|YP_006409263.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
gi|390422072|gb|AFL76578.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
Length = 730
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK NV +++I IK + G+SGI+YCL+RK+ + + L I
Sbjct: 203 FKSSFNRPNLYYEIRPKHNVDRDIIRFIK-QNEGKSGIIYCLSRKKVEELTELLVANGIK 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAG+ R Q ++ + V
Sbjct: 262 ALAYHAGMDAATRAANQDHFLMERADV 288
>gi|444719769|gb|ELW60560.1| ATP-dependent DNA helicase Q1, partial [Tupaia chinensis]
Length = 648
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++V+ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 275 FTASFNRPNLYYEVRQKPSNTEDFIEDVVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 334
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A +YHA + + +V +W +N++ V
Sbjct: 335 LGIHAGAYHANMEPDDKTKVHRRWSANEIQV 365
>gi|408370738|ref|ZP_11168512.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
gi|407743730|gb|EKF55303.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
Length = 733
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK KNV ++I +K +G+SGI+YCL+RK+ + +A L I
Sbjct: 203 FKASFNRPNLYYEVRPKTKNVDVDIIRFVKQN-TGKSGIIYCLSRKKVEELAQTLEVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R + Q ++ V V
Sbjct: 262 KAVPYHAGLDAKTRAKHQDMFLMEDVDV 289
>gi|374287671|ref|YP_005034756.1| ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
gi|301166212|emb|CBW25787.1| ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
Length = 605
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 56/80 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ISSF+R+N+KY IL +++ +K++ I ++G +GIVYCL+RK+ +SV+ L + +
Sbjct: 203 YISSFDRSNIKYSILEREDEIKQLDEFISKNHAGDTGIVYCLSRKKVESVSKKLKERGHH 262
Query: 61 AISYHAGLADKLRNEVQMKW 80
+ +YHAGL+ R+ VQ +
Sbjct: 263 SFAYHAGLSANERDFVQKAF 282
>gi|68477651|ref|XP_717138.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
gi|68477814|ref|XP_717059.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438756|gb|EAK98082.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438838|gb|EAK98163.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
Length = 1189
Score = 72.4 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YEI L K N L E+ I +++SG+SGI+YC +++ C+ + L + +
Sbjct: 656 SFNRTNLFYEIKLKKSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTS 715
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG++ R +Q +W NK+ V
Sbjct: 716 FYHAGMSADKRFNIQKRWQENKIQV 740
>gi|387793516|ref|YP_006258581.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379656349|gb|AFD09405.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 705
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 1 FISSFNRANLKYEI---LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F++SF+R NL E+ + + +E++ I +K QSGI+YCL+RK + +A L +
Sbjct: 194 FVASFDRPNLNLEVKTGIKTRQKDQEIVQFIHSK-PNQSGIIYCLSRKTTEELAEKLREH 252
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
++NA +YHAG++ RNE Q +I+++V V TV
Sbjct: 253 QVNAAAYHAGMSADDRNETQEDFINDRVQVVCATV 287
>gi|357167600|ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
distachyon]
Length = 1126
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL+Y ++PK K L+++ + I+A + + GI+YCL+R +C+ VAA L +
Sbjct: 555 FRQSFNRPNLRYIVMPKTKKCLEDIDNFIRASHHKECGIIYCLSRMDCEKVAAKLREYGH 614
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHVGHWTVV 93
A YH + R E+Q +W +K+++ TV
Sbjct: 615 KASHYHGSMDPLDRTEIQRQWSRDKINIICATVA 648
>gi|334366676|ref|ZP_08515601.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
gi|313157180|gb|EFR56610.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
Length = 730
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK NV +++I IK + G+SGI+YCL+RK+ + + L I
Sbjct: 203 FKSSFNRPNLYYEIRPKHNVDRDIIRFIK-QNEGKSGIIYCLSRKKVEELTELLVANGIK 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A++YHAG+ R Q ++ + V
Sbjct: 262 ALAYHAGMDAATRAANQDHFLMERADV 288
>gi|325280334|ref|YP_004252876.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
gi|324312143|gb|ADY32696.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
Length = 727
Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK+ +V K++I IK + G+SGI+YCL+RK+ + +A L+ I
Sbjct: 201 FKSSFNRPNLYYEVRPKQGDVTKDIIKFIK-NHEGKSGIIYCLSRKKVEELAEVLSINGI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R+ Q +++ +V V
Sbjct: 260 KAAPYHAGMDASTRSTNQDRFLMEEVDV 287
>gi|9945008|gb|AAG03075.1|AF294728_1 Sgs1p [Candida albicans]
Length = 1189
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEI-LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YEI L K N L E+ I +++SG+SGI+YC +++ C+ + L + +
Sbjct: 656 SFNRTNLFYEIKLKKSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTS 715
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG++ R +Q +W NK+ V
Sbjct: 716 FYHAGMSADKRFNIQKRWQENKIQV 740
>gi|395494603|ref|ZP_10426182.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. PAMC 25886]
Length = 708
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSDRRS-DAGIVYCLSRKKVDEVAAFLSEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAFHQKRFLNEE 278
>gi|158317217|ref|YP_001509725.1| ATP-dependent DNA helicase RecQ [Frankia sp. EAN1pec]
gi|158112622|gb|ABW14819.1| ATP-dependent DNA helicase RecQ [Frankia sp. EAN1pec]
Length = 605
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N++Y I+PK + +++ L++ ++ G +GIVYCL+R + +A L I
Sbjct: 191 FVADFDRPNIQYRIVPKNDPKAQLLELLRTEHPGDAGIVYCLSRASVEKIAEFLVSNGIA 250
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R E Q +++
Sbjct: 251 ALPYHAGLEARVRAEHQARFL 271
>gi|404401899|ref|ZP_10993483.1| ATP-dependent DNA helicase RecQ [Pseudomonas fuscovaginae UPB0736]
Length = 709
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + + SGIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSQRRA-DSGIVYCLSRKKVDEVAALLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R + Q ++++ +
Sbjct: 255 ALPYHAGLPSETRADNQRRFLNEE 278
>gi|239813172|ref|YP_002942082.1| ATP-dependent DNA helicase RecQ [Variovorax paradoxus S110]
gi|239799749|gb|ACS16816.1| ATP-dependent DNA helicase RecQ [Variovorax paradoxus S110]
Length = 633
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ KK+ +++ I+ ++ G +G+VYC +RK + VA L IN
Sbjct: 217 FVSSFDRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVMLKGAGIN 276
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R + Q +++
Sbjct: 277 ALPYHAGLDAAVRQKHQDRFL 297
>gi|372223763|ref|ZP_09502184.1| RecQ familyATP-dependent DNA helicase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 733
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK KNV ++I +K + SG+SGIVYCL+RK+ + +A L I
Sbjct: 203 FKASFNRPNLFYEVRPKTKNVDADIIRFVK-QNSGKSGIVYCLSRKKVEELAQVLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAG K R + Q ++ V V
Sbjct: 262 SAVPYHAGFDAKTRAKYQDMFLMEDVDV 289
>gi|293603632|ref|ZP_06686053.1| ATP-dependent helicase RecQ [Achromobacter piechaudii ATCC 43553]
gi|292818068|gb|EFF77128.1| ATP-dependent helicase RecQ [Achromobacter piechaudii ATCC 43553]
Length = 609
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K V K+++ +I+ ++ G+SG+VY L+R + A L + I+
Sbjct: 197 FVSSFDRPNIRYRIVEKNEVRKQLLEMIRTEHEGESGVVYGLSRARVEETAEFLCNQGID 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ ++R Q +++
Sbjct: 257 AMPYHAGLSPQVRAANQARFL 277
>gi|367001388|ref|XP_003685429.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
gi|357523727|emb|CCE62995.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
Length = 1280
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL Y I K KN + E+ S +K + QSGI+YC ++ C+ VA +A ++I
Sbjct: 737 SFNRTNLDYIIRTKSKNTVNEICSSLKTDFKNQSGIIYCNSKISCEQVAQQIASQKIRTA 796
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R ++Q W +N+V V
Sbjct: 797 FYHAGMTPSERLKIQKAWQNNQVQV 821
>gi|406883341|gb|EKD30951.1| hypothetical protein ACD_77C00439G0002 [uncultured bacterium]
Length = 733
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SFNR NL YEI K N +E+I IKA G+SGI+YCL+RK+ + VA L I
Sbjct: 203 FKTSFNRPNLYYEIRHKANTEREIIRFIKAN-EGKSGIIYCLSRKKVEDVAQLLVVNGIK 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL R Q ++ V V
Sbjct: 262 ALPYHAGLDAYTRASNQDSFLMEGVDV 288
>gi|423096663|ref|ZP_17084459.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens Q2-87]
gi|397886178|gb|EJL02661.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens Q2-87]
Length = 708
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|383645126|ref|ZP_09957532.1| helicase [Streptomyces chartreusis NRRL 12338]
Length = 686
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++S ++ +++G +GIVYCL+R + A L++ I
Sbjct: 220 FVASFDRPNIQYRIVPKADPKKQLLSFLREEHAGDAGIVYCLSRNSVERTAEFLSRNGIE 279
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 280 AVPYHAGLDAGTRAAHQSRFL 300
>gi|380491813|emb|CCF35054.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
higginsianum]
Length = 1601
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAAL-AQER 58
F SFNR NL YE+ K K ++ ++ LI +KY GQ GI+Y L+RK + VA L +Q
Sbjct: 900 FSQSFNRPNLTYEVRRKEKELIHKIADLIMSKYDGQCGIIYTLSRKTSEQVAEKLRSQYG 959
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHA + + R VQ +W ++K+HV
Sbjct: 960 VKANHYHAQMTPEDRIRVQREWQADKIHV 988
>gi|365863287|ref|ZP_09403009.1| putative ATP-dependent DNA helicase [Streptomyces sp. W007]
gi|364007270|gb|EHM28288.1| putative ATP-dependent DNA helicase [Streptomyces sp. W007]
Length = 711
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K++++ +K +++G +GIVYCL+R + +A L + +
Sbjct: 236 FVASFDRPNIQYRIVPKSEPKKQLLTFLKEEHAGDAGIVYCLSRNSTEKIAEYLCRNGVE 295
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 296 AVPYHAGLDAGTRATHQARFL 316
>gi|378949445|ref|YP_005206933.1| RecQ protein [Pseudomonas fluorescens F113]
gi|359759459|gb|AEV61538.1| RecQ [Pseudomonas fluorescens F113]
Length = 708
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|332531260|ref|ZP_08407173.1| ATP-dependent DNA helicase RecQ [Hylemonella gracilis ATCC 19624]
gi|332039367|gb|EGI75780.1| ATP-dependent DNA helicase RecQ [Hylemonella gracilis ATCC 19624]
Length = 616
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ KK+ L +++ I+ ++ G +GIVYC +RK + VA L + ++
Sbjct: 205 FVSSFDRPNIRYTIVEKKDGLTQLLRFIEREHEGDAGIVYCQSRKRVEEVARQLVEAGVH 264
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 265 ALPYHAGLDASVRQRHQDRFL 285
>gi|330808172|ref|YP_004352634.1| ATP-dependent DNA helicase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376280|gb|AEA67630.1| ATP-dependent DNA helicase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 708
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|326777358|ref|ZP_08236623.1| ATP-dependent DNA helicase RecQ [Streptomyces griseus XylebKG-1]
gi|326657691|gb|EGE42537.1| ATP-dependent DNA helicase RecQ [Streptomyces griseus XylebKG-1]
Length = 683
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K++++ +K +++G +GIVYCL+R + +A L + +
Sbjct: 212 FVASFDRPNIQYRIVPKSEPKKQLLTFLKEEHAGDAGIVYCLSRNSTEKIAEYLCRNGVE 271
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 272 AVPYHAGLDAGTRAAHQARFL 292
>gi|285019020|ref|YP_003376731.1| DNA helicase superfamily II protein [Xanthomonas albilineans GPE
PC73]
gi|283474238|emb|CBA16739.1| putative dna helicase superfamily II protein [Xanthomonas
albilineans GPE PC73]
Length = 602
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K N ++++ ++ + G +GIVYCL+R++ + A L +E +N
Sbjct: 196 FVSSFDRPNIRYTVVQKDNARRQLLDFLRG-HRGSAGIVYCLSRRKVEETADFLVREGLN 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R E Q +++
Sbjct: 255 ALPYHAGLPANVRAEHQRRFL 275
>gi|182436763|ref|YP_001824482.1| ATP-dependent DNA helicase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178465279|dbj|BAG19799.1| putative ATP-dependent DNA helicase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 683
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K++++ +K +++G +GIVYCL+R + +A L + +
Sbjct: 212 FVASFDRPNIQYRIVPKSEPKKQLLTFLKEEHAGDAGIVYCLSRNSTEKIAEYLCRNGVE 271
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 272 AVPYHAGLDAGTRAAHQARFL 292
>gi|359795845|ref|ZP_09298458.1| ATP-dependent DNA helicase RecQ [Achromobacter arsenitoxydans SY8]
gi|359366164|gb|EHK67848.1| ATP-dependent DNA helicase RecQ [Achromobacter arsenitoxydans SY8]
Length = 609
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K V K+++ +I+ ++ G+SG+VY L+R + A L + I+
Sbjct: 197 FVSSFDRPNIRYRIVEKNEVRKQLLDMIRTEHEGESGVVYGLSRARVEETAEFLCNQGID 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ ++R Q +++
Sbjct: 257 AMPYHAGLSPQVRAANQARFL 277
>gi|260221542|emb|CBA30210.1| ATP-dependent DNA helicase recQ [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 615
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ KK+ +++ I+ ++ G++GIVYC +RK+ + +A L I
Sbjct: 202 FVSSFDRPNIRYTIVEKKDSTTQLLRFIEREHEGEAGIVYCQSRKKVEDMAQTLVDAGIK 261
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL K+R Q +++
Sbjct: 262 ALPYHAGLDSKVRQLNQDRFL 282
>gi|433608473|ref|YP_007040842.1| ATP-dependent DNA helicase RecQ [Saccharothrix espanaensis DSM
44229]
gi|407886326|emb|CCH33969.1| ATP-dependent DNA helicase RecQ [Saccharothrix espanaensis DSM
44229]
Length = 600
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K+++ L++ +++G +GIVYCL+R + A L Q +
Sbjct: 194 FVASFDRPNIQYRIVPKNEPKKQLLELLRNEHAGDAGIVYCLSRNSVEKTAEFLEQNGVR 253
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 254 ALPYHAGLDSGTRARNQSRFL 274
>gi|302528413|ref|ZP_07280755.1| ATP-dependent DNA helicase RecQ [Streptomyces sp. AA4]
gi|302437308|gb|EFL09124.1| ATP-dependent DNA helicase RecQ [Streptomyces sp. AA4]
Length = 639
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++ L++ ++ G +GIVYCL+R + A L Q I
Sbjct: 231 FVASFDRPNIQYRIVPKNSPQKQLLELLRTEHQGDAGIVYCLSRASVEKTADFLVQNGIP 290
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 291 ALPYHAGLDKGTRAANQSRFL 311
>gi|422340643|ref|ZP_16421584.1| ATP-dependent DNA helicase RecQ [Treponema denticola F0402]
gi|325475483|gb|EGC78664.1| ATP-dependent DNA helicase RecQ [Treponema denticola F0402]
Length = 626
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI+ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FIAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|388853955|emb|CCF52453.1| related to SGS1-DNA helicase [Ustilago hordei]
Length = 1290
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 4 SFNRANLKYEIL--PKKNV--LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALA-QER 58
SFNR NL+Y++ PK NV ++E+ SLI + GQ GI+YC +R+ C++VA L+ Q
Sbjct: 612 SFNRPNLEYQVRKKPKTNVKAMEEISSLILTSHKGQCGIIYCFSRESCETVAHDLSTQYG 671
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A YHA L+ R VQ +W N+ V
Sbjct: 672 ISAHHYHAKLSADDRAMVQQRWQKNEFQV 700
>gi|70728971|ref|YP_258705.1| ATP-dependent DNA helicase RecQ [Pseudomonas protegens Pf-5]
gi|68343270|gb|AAY90876.1| ATP-dependent DNA helicase RecQ [Pseudomonas protegens Pf-5]
Length = 708
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++ + + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLQAFLNERRS-DAGIVYCLSRKKVDEVAAFLCEQGFT 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|315504737|ref|YP_004083624.1| ATP-dependent DNA helicase recq [Micromonospora sp. L5]
gi|315411356|gb|ADU09473.1| ATP-dependent DNA helicase RecQ [Micromonospora sp. L5]
Length = 617
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK+ ++++SL++ ++SG +GIVYCL+R + A L I
Sbjct: 208 FVASFDRPNIQYRIVPKREPRRQLLSLLRDEHSGDAGIVYCLSRASVEKTAEFLVANGIP 267
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 268 ALLYHAGLDASTRAANQQRFL 288
>gi|189463687|ref|ZP_03012472.1| hypothetical protein BACINT_00018 [Bacteroides intestinalis DSM
17393]
gi|189438637|gb|EDV07622.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 727
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK N+ +++I IK S +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTNNIDRDIIKFIKNN-SEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|424790625|ref|ZP_18217151.1| DNA helicase [Xanthomonas translucens pv. graminis ART-Xtg29]
gi|422797927|gb|EKU26107.1| DNA helicase [Xanthomonas translucens pv. graminis ART-Xtg29]
Length = 602
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K N ++++ ++A + G +GIVYC++R++ + A LA+E +N
Sbjct: 196 FVSSFDRPNIRYTVVQKDNSKRQLLDFLRA-HRGSAGIVYCMSRRKVEETAEFLAKEGLN 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 255 ALPYHAGLPAEVRAGNQRRFL 275
>gi|192293669|ref|YP_001994274.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris TIE-1]
gi|192287418|gb|ACF03799.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris TIE-1]
Length = 616
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 55/82 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K+N ++ + I ++ G SG+VYCL+R + + +A L++ +
Sbjct: 208 FVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHRGHSGVVYCLSRAKVEDIAETLSKSGLT 267
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL ++R Q ++++
Sbjct: 268 ALPYHAGLPAEIRARNQDRFLN 289
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K + +++ IK + SGIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVRAKTSKSYQQLYQYIKGQKG--SGIVYCISRKTVDQVAEQLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAG+ D+ R+E Q ++I + V + T+
Sbjct: 261 ALPYHAGMNDQERSENQTRFIRDDVQIMVATI 292
>gi|375149593|ref|YP_005012034.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
gi|361063639|gb|AEW02631.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
Length = 763
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 12/94 (12%)
Query: 1 FISSFNRANLKYEILPK-------KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAA 53
+ISSFNR NL YEI PK KN+++ ++S+ G+SGI+Y L RK + +A
Sbjct: 233 YISSFNRPNLYYEIQPKIKKDQTIKNIVRFIVSM-----KGKSGIIYTLNRKTTEELADM 287
Query: 54 LAQERINAISYHAGLADKLRNEVQMKWISNKVHV 87
L I A++YHAGL KLR E Q +++ V V
Sbjct: 288 LMANGIKAVAYHAGLDSKLRAERQDLFLNEDVQV 321
>gi|294630810|ref|ZP_06709370.1| RecQ family ATP-dependent DNA helicase [Streptomyces sp. e14]
gi|292834143|gb|EFF92492.1| RecQ family ATP-dependent DNA helicase [Streptomyces sp. e14]
Length = 687
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++S ++A++ G +GIVYCL+R + A L+ +
Sbjct: 197 FVASFDRPNIQYRIVPKADPKKQLLSFLRAEHPGDAGIVYCLSRNSVERTAEFLSANGVE 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 AVPYHAGLDAGTRAAHQSRFL 277
>gi|422348938|ref|ZP_16429830.1| ATP-dependent DNA helicase RecQ [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658990|gb|EKB31852.1| ATP-dependent DNA helicase RecQ [Sutterella wadsworthensis
2_1_59BFAA]
Length = 607
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y I+ K+N+ +++++ IK ++SG SGIVYCL R+ + +A L+ I
Sbjct: 197 FVASFDRPNIFYRIVDKRNIKEQLLNFIKYEHSGDSGIVYCLARRTTEEIAQYLSGCGIE 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 257 ALPYHAGLPAEERARNQARFL 277
>gi|409401711|ref|ZP_11251398.1| ATP-dependent DNA helicase RecQ [Acidocella sp. MX-AZ02]
gi|409129597|gb|EKM99441.1| ATP-dependent DNA helicase RecQ [Acidocella sp. MX-AZ02]
Length = 609
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y +L K+ L+++ + ++A + G+SGIVYCL+R + AAAL Q I
Sbjct: 204 FLSSFDRPNIRYAVLRKEAPLRQLQTFLRA-HEGESGIVYCLSRNSVEQTAAALNQHGIR 262
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAG+ + R Q ++++ +
Sbjct: 263 ALPYHAGMPAETRAANQDEFLTTE 286
>gi|288940303|ref|YP_003442543.1| ATP-dependent DNA helicase RecQ [Allochromatium vinosum DSM 180]
gi|288895675|gb|ADC61511.1| ATP-dependent DNA helicase RecQ [Allochromatium vinosum DSM 180]
Length = 620
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K N ++++ ++ ++ +GIVYCL+R+ + A L E
Sbjct: 196 FVSSFDRPNIRYRIVEKTNPRRQLLDFLRREHPESAGIVYCLSRRRVEETAVYLESEGFR 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R E Q +++
Sbjct: 256 ALPYHAGLPSEMRREHQARFL 276
>gi|449103687|ref|ZP_21740431.1| ATP-dependent DNA helicase RecQ [Treponema denticola AL-2]
gi|448964529|gb|EMB45199.1| ATP-dependent DNA helicase RecQ [Treponema denticola AL-2]
Length = 626
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI+ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FIAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|345848416|ref|ZP_08801438.1| helicase [Streptomyces zinciresistens K42]
gi|345640152|gb|EGX61637.1| helicase [Streptomyces zinciresistens K42]
Length = 668
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y ++PK + K+++ ++ +++G +GIVYCL+RK ++ A L++ +
Sbjct: 217 FVASFDRPNIQYRVVPKADPKKQLLGFLREEHAGDAGIVYCLSRKSVEATAEFLSRNGVE 276
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 277 AVPYHAGLDAGTRAAHQSRFL 297
>gi|397686795|ref|YP_006524114.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri DSM 10701]
gi|395808351|gb|AFN77756.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri DSM 10701]
Length = 707
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAFHQKRFLNEE 278
>gi|440698532|ref|ZP_20880872.1| ATP-dependent DNA helicase RecQ [Streptomyces turgidiscabies Car8]
gi|440279061|gb|ELP67011.1| ATP-dependent DNA helicase RecQ [Streptomyces turgidiscabies Car8]
Length = 702
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++S +K +++G +GIVYCL+R + A L+ +
Sbjct: 236 FVASFDRPNIQYRIVPKADPKKQLLSFLKEEHAGDAGIVYCLSRNSVERTAEFLSANGVQ 295
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 296 AVPYHAGLDAGTRAAHQSRFL 316
>gi|304383399|ref|ZP_07365865.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
gi|304335567|gb|EFM01831.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
Length = 726
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ K +++ K++I I+ ++ G+SGIVYCL+RK + +AA L I
Sbjct: 202 FKSSFNRPNLYYEVRAKTQDIDKQIIKFIR-QHQGKSGIVYCLSRKTVEELAAVLCANDI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 261 KAAPYHAGLDSAKRSQTQDAFLMERIDV 288
>gi|432088961|gb|ELK23146.1| ATP-dependent DNA helicase Q1 [Myotis davidii]
Length = 489
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ +I +Y GQSGI+YC ++K+ + V +L +
Sbjct: 117 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKVINGRYKGQSGIIYCFSQKDSEQVTGSLQK 176
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + +V +W +N++ V TV
Sbjct: 177 LGIRAGAYHANMEPEDKTKVHRRWSANEIQVVVATV 212
>gi|374298589|ref|YP_005050228.1| ATP-dependent DNA helicase RecQ [Desulfovibrio africanus str.
Walvis Bay]
gi|332551525|gb|EGJ48569.1| ATP-dependent DNA helicase RecQ [Desulfovibrio africanus str.
Walvis Bay]
Length = 769
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 51/73 (69%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ +SF+R NL+Y + PK + ++++ I+ ++ G++GIVYCL+R++ + AA LA+E +
Sbjct: 219 YCASFDRPNLRYIVKPKDHPFRQLMEFIRREHPGEAGIVYCLSRRKVEETAARLAKEGLR 278
Query: 61 AISYHAGLADKLR 73
A+ YHAGL R
Sbjct: 279 ALPYHAGLPSSER 291
>gi|409124316|ref|ZP_11223711.1| ATP-dependent DNA helicase RecQ [Gillisia sp. CBA3202]
Length = 731
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YEI PK KNV ++I +K G+SGI+YCL+RK + +A L I
Sbjct: 203 FKASFNRPNLYYEIRPKTKNVDSDIIRFVKQN-EGKSGIIYCLSRKRVEELAQVLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R + Q +I + V
Sbjct: 262 KAVPYHAGLDAKTRIKHQDMFIMEDIDV 289
>gi|319900082|ref|YP_004159810.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
gi|319415113|gb|ADV42224.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
Length = 727
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV +++I IK S +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDRDIIKFIKNN-SEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|167035017|ref|YP_001670248.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida GB-1]
gi|166861505|gb|ABY99912.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida GB-1]
Length = 715
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + G +GIVYCL+RK+ D AA L Q+
Sbjct: 196 FLSSFDRPNIFYRIVPKEAPRKQLMAFLGER-RGNAGIVYCLSRKKVDETAAFLCQQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGLA + R Q ++++ +
Sbjct: 255 ALPYHAGLAAETRAANQHRFLNEE 278
>gi|150025301|ref|YP_001296127.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
gi|149771842|emb|CAL43316.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
Length = 731
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K KNV ++I IK ++ G+SGI+YCL+RK+ +++A L I
Sbjct: 202 FKASFNRPNLYYEVRTKTKNVESDIIRFIK-QHKGKSGIIYCLSRKKVEAIAQVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|414079433|ref|YP_007000857.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
gi|413972712|gb|AFW96800.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
Length = 729
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K N E++ +++ SGI+YCLTRK+ D + L ++++
Sbjct: 203 IASFNRQNLHYEVRSKSNRAYAELLEIVRENEG--SGIIYCLTRKKVDEITLKLQNDKVS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ YHAGL+D+ R++ Q ++I + V V TV
Sbjct: 261 VLPYHAGLSDEERSKNQTRFIRDDVRVMVATV 292
>gi|377573455|ref|ZP_09802516.1| ATP-dependent DNA helicase RecQ [Mobilicoccus pelagius NBRC 104925]
gi|377537844|dbj|GAB47681.1| ATP-dependent DNA helicase RecQ [Mobilicoccus pelagius NBRC 104925]
Length = 631
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N++Y I+PK + ++++ ++A++ G +GIVYCL+R + VA L + I
Sbjct: 213 FVADFDRPNIQYRIVPKDSPQQQLLQFLRAEHEGDAGIVYCLSRASVERVAEFLCSQGIP 272
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R+ Q +++
Sbjct: 273 ALPYHAGLDREVRSTNQARFL 293
>gi|256389909|ref|YP_003111473.1| ATP-dependent DNA helicase RecQ [Catenulispora acidiphila DSM
44928]
gi|256356135|gb|ACU69632.1| ATP-dependent DNA helicase RecQ [Catenulispora acidiphila DSM
44928]
Length = 662
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N++Y I+PK K+++ L++ ++ G +GIVYCL+R + A LA I
Sbjct: 204 FVAGFDRPNIQYRIVPKAEPNKQLLELLRTEHPGDAGIVYCLSRASTEKTAQFLANNGIT 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAGL R Q +++
Sbjct: 264 ALAYHAGLDAATRARTQSRFL 284
>gi|373501519|ref|ZP_09591870.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
gi|371948172|gb|EHO66059.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
Length = 727
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ PK+ + +++I I+ +++G+SGI+YCL+R++ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRPKRSDEDTNRQLIRFIR-QHAGKSGIIYCLSRRKVEELAAVLQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ ++ V
Sbjct: 260 DIKAAPYHAGLDSETRSKTQDGFLMEEIDV 289
>gi|289208024|ref|YP_003460090.1| ATP-dependent DNA helicase RecQ [Thioalkalivibrio sp. K90mix]
gi|288943655|gb|ADC71354.1| ATP-dependent DNA helicase RecQ [Thioalkalivibrio sp. K90mix]
Length = 626
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 13/90 (14%)
Query: 1 FISSFNRANLKYEIL---------PKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVA 51
FISSF+R N++Y + P+ +L+ I+ +++G++GIVYCL+RK+ D+VA
Sbjct: 211 FISSFDRPNIRYRVAQADGGRGGAPRDRLLR----FIREEHAGEAGIVYCLSRKKVDAVA 266
Query: 52 AALAQERINAISYHAGLADKLRNEVQMKWI 81
LA++ + A+ YHAGL+ + R E Q +++
Sbjct: 267 EWLAEQGVPALPYHAGLSARTRAENQTRFL 296
>gi|418292190|ref|ZP_12904140.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379063623|gb|EHY76366.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 707
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL +LR Q ++++ +
Sbjct: 255 ALPYHAGLPSELRAYHQKRFLNEE 278
>gi|340522439|gb|EGR52672.1| hypothetical protein TRIREDRAFT_102458 [Trichoderma reesei QM6a]
Length = 1690
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK + V +++ +LIKAKY +GI+Y ++RK+ + VA L +
Sbjct: 1000 FSQSFNRPNLYYEVRPKGSNPVVTQQIAALIKAKYPNVTGIIYTISRKQAEDVAQKLCEH 1059
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + EVQ W ++ V
Sbjct: 1060 GITARHYHAQITPSEKVEVQTAWQKGQIKV 1089
>gi|319945102|ref|ZP_08019364.1| ATP-dependent helicase RecQ [Lautropia mirabilis ATCC 51599]
gi|319741672|gb|EFV94097.1| ATP-dependent helicase RecQ [Lautropia mirabilis ATCC 51599]
Length = 607
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 53/77 (68%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K++ ++++ I+ + G+SGIVYC +R + VAA L +E +
Sbjct: 194 FVTSFDRPNIRYRIIEKRDGNQQLLRFIRDGHEGESGIVYCASRNRTEQVAAFLQEEGFH 253
Query: 61 AISYHAGLADKLRNEVQ 77
A +YHAGL R++VQ
Sbjct: 254 ARAYHAGLEAAERSDVQ 270
>gi|443292844|ref|ZP_21031938.1| ATP-dependent DNA helicase [Micromonospora lupini str. Lupac 08]
gi|385884054|emb|CCH20089.1| ATP-dependent DNA helicase [Micromonospora lupini str. Lupac 08]
Length = 613
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK+ K++++L++ ++ G +GIVYCL+R D A L +
Sbjct: 203 FVASFDRPNIQYRIVPKREPRKQLLALLRDEHPGDAGIVYCLSRASVDKTAEFLVANGVA 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 263 ALPYHAGLDAATRAANQQRFL 283
>gi|418058761|ref|ZP_12696727.1| ATP-dependent DNA helicase, RecQ family [Methylobacterium
extorquens DSM 13060]
gi|373567668|gb|EHP93631.1| ATP-dependent DNA helicase, RecQ family [Methylobacterium
extorquens DSM 13060]
Length = 368
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
+SF+R N+ I P+++ +++S I+A G++GIVYCL+RK+ ++ AA L + I+AI
Sbjct: 198 TSFDRPNIDLTITPRESANDQILSFIRAGGKGETGIVYCLSRKKVEATAAWLKRRGIDAI 257
Query: 63 SYHAGLADKLRNEVQMKWI 81
YHAG + R++ Q +I
Sbjct: 258 PYHAGFDAQTRSQAQKAFI 276
>gi|399026913|ref|ZP_10728551.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398075677|gb|EJL66783.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 731
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K KN+ ++I IK ++ G+SGI+YCL+RK+ +++A L I
Sbjct: 202 FKASFNRPNLYYEVRTKTKNIESDIIRFIK-QHKGKSGIIYCLSRKKVETIAEVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|330469168|ref|YP_004406911.1| ATP-dependent DNA helicase RecQ [Verrucosispora maris AB-18-032]
gi|328812139|gb|AEB46311.1| ATP-dependent DNA helicase RecQ [Verrucosispora maris AB-18-032]
Length = 634
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK+ K++++L++ ++ G +GIVYCL+R + A L I+
Sbjct: 222 FVASFDRPNIQYRIVPKREPRKQLLALLRDEHPGDAGIVYCLSRASVEKTAEFLVANGID 281
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 282 ALPYHAGLDAATRAANQQRFL 302
>gi|431927011|ref|YP_007240045.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri RCH2]
gi|431825298|gb|AGA86415.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri RCH2]
Length = 707
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDFAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAYHQKRFLNEE 278
>gi|321475158|gb|EFX86121.1| RecQ1-like protein [Daphnia pulex]
Length = 624
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K K + E++ L+ ++ GQSGI+Y + K+CD +A+ L Q
Sbjct: 267 FKASFNRPNLYYEVRIKPSTQKECIDELVQLLTNRFHGQSGIIYTTSVKDCDQLASELRQ 326
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNK 84
++ SYHA L R EV W N+
Sbjct: 327 QKCRVASYHASLEPADRTEVHTGWRENR 354
>gi|240141963|ref|YP_002966473.1| ATP-dependent DNA helicase (fragment) [Methylobacterium extorquens
AM1]
gi|240011907|gb|ACS43132.1| ATP-dependent DNA helicase (fragment) [Methylobacterium extorquens
AM1]
Length = 368
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
+SF+R N+ I P+++ +++S I+A G++GIVYCL+RK+ ++ AA L + I+AI
Sbjct: 198 TSFDRPNIDLTITPRESANDQILSFIRAGGKGETGIVYCLSRKKVEATAAWLKRRGIDAI 257
Query: 63 SYHAGLADKLRNEVQMKWI 81
YHAG + R++ Q +I
Sbjct: 258 PYHAGFDAQTRSQAQKAFI 276
>gi|218438410|ref|YP_002376739.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
gi|218171138|gb|ACK69871.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
Length = 709
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL Y+I PK K +++ I+A SGIVYC++R+ D +A L + I+
Sbjct: 204 IASFNRTNLYYDIKPKEKRSYNQLLKYIRAHQG--SGIVYCMSRRNVDEIAFRLQNDGIS 261
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAGL D+ R Q ++I + V V TV
Sbjct: 262 ALPYHAGLTDEARTLNQTRFIRDDVRVMVATV 293
>gi|440741369|ref|ZP_20920801.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens BRIP34879]
gi|440372334|gb|ELQ09140.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens BRIP34879]
Length = 709
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|399033938|ref|ZP_10732419.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398067770|gb|EJL59249.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 703
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R NL E+ P + +K++I ++ K +SGI+YCL+RK + +A L + I
Sbjct: 195 FVASFDRKNLSLEVRPALDRVKQIIDFVENK-PNESGIIYCLSRKTTEELAEKLQKSGIT 253
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL +KLR + Q ++I++ V
Sbjct: 254 AKAYHAGLENKLRAKTQDEFINDDCQV 280
>gi|320334812|ref|YP_004171523.1| ATP-dependent DNA helicase RecQ [Deinococcus maricopensis DSM
21211]
gi|319756101|gb|ADV67858.1| ATP-dependent DNA helicase RecQ [Deinococcus maricopensis DSM
21211]
Length = 702
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y + K + +++ I+ ++ G +GIVYCL+RK + AA L ++ +
Sbjct: 204 FISSFDRPNIQYRVTAKSSARTQLLDFIRTEHPGDAGIVYCLSRKSVEETAAWLCEQGLT 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R+ Q +++
Sbjct: 264 ALPYHAGLDARTRDLHQERFL 284
>gi|395648579|ref|ZP_10436429.1| ATP-dependent DNA helicase RecQ [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 708
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|312962307|ref|ZP_07776798.1| ATP-dependent DNA helicase [Pseudomonas fluorescens WH6]
gi|311283234|gb|EFQ61824.1| ATP-dependent DNA helicase [Pseudomonas fluorescens WH6]
Length = 708
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|333900176|ref|YP_004474049.1| ATP-dependent DNA helicase RecQ [Pseudomonas fulva 12-X]
gi|333115441|gb|AEF21955.1| ATP-dependent DNA helicase RecQ [Pseudomonas fulva 12-X]
Length = 707
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + A+ G +GIVYCL+RK+ + VA+ L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAAR-KGDAGIVYCLSRKKVEEVASFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL +LR Q ++++ +
Sbjct: 255 ALPYHAGLPAELRAFNQKRFLNEE 278
>gi|423692812|ref|ZP_17667332.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens SS101]
gi|388000709|gb|EIK62038.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens SS101]
Length = 709
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|387894918|ref|YP_006325215.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens A506]
gi|387163933|gb|AFJ59132.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens A506]
Length = 709
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|229591882|ref|YP_002874001.1| ATP-dependent DNA helicase [Pseudomonas fluorescens SBW25]
gi|229363748|emb|CAY51154.1| ATP-dependent DNA helicase [Pseudomonas fluorescens SBW25]
Length = 708
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|224535963|ref|ZP_03676502.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226021|ref|ZP_17212487.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|224522418|gb|EEF91523.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630878|gb|EIY24859.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 727
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK N+ +++I IK S +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTNNIDRDIIKFIKNN-SEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|388468368|ref|ZP_10142578.1| ATP-dependent DNA helicase RecQ [Pseudomonas synxantha BG33R]
gi|388011948|gb|EIK73135.1| ATP-dependent DNA helicase RecQ [Pseudomonas synxantha BG33R]
Length = 709
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAAFLCEQGYP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R+ Q ++++ +
Sbjct: 255 ALPYHAGLPNETRSAHQKRFLNEE 278
>gi|255037625|ref|YP_003088246.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950381|gb|ACT95081.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 717
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R NL +LP + ++++ + K+ GQ GI+YCL+RK ++VAA+L +
Sbjct: 196 FISSFDRPNLSLNVLPGRKRIEQIQRFVN-KHEGQPGIIYCLSRKGTETVAASLQKAGFR 254
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R++VQ ++ + + +
Sbjct: 255 VAYYHAGMPGDKRSQVQENFLRDDIQI 281
>gi|225154844|ref|ZP_03723342.1| ATP-dependent DNA helicase RecQ [Diplosphaera colitermitum TAV2]
gi|224804374|gb|EEG22599.1| ATP-dependent DNA helicase RecQ [Diplosphaera colitermitum TAV2]
Length = 611
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SFNRANL Y +LPK LK++I +K K +SGIVYC +R A +LA +
Sbjct: 195 FVASFNRANLSYRVLPKDEPLKQIIDFVK-KREDESGIVYCASRATAQRTAESLASRGYS 253
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R+ Q ++ + V +
Sbjct: 254 ARPYHAGLTADERSTNQEMFLRDDVKI 280
>gi|152988455|ref|YP_001347169.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PA7]
gi|452877674|ref|ZP_21954938.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa VRFPA01]
gi|150963613|gb|ABR85638.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PA7]
gi|452185615|gb|EME12633.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa VRFPA01]
Length = 711
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYCL+RK+ + VA L +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCLSRKKVEEVAEFLGNQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL+++LR Q ++++ +
Sbjct: 255 ALPYHAGLSNELRAHHQKRFLNEE 278
>gi|343085469|ref|YP_004774764.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342354003|gb|AEL26533.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 725
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SSFNR NL YE+ PK KE+I IK++ G+SGI+YCL+RK+ +A L
Sbjct: 197 FKSSFNRTNLYYEVRPKVKSETKKEIIKYIKSQ-KGKSGIIYCLSRKKVTEIAELLKVNG 255
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
INA YHAGL +R + Q +++ +V V
Sbjct: 256 INAAPYHAGLDGHVRVKNQDDFLNEEVDV 284
>gi|302805332|ref|XP_002984417.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
gi|300147805|gb|EFJ14467.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
Length = 605
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 3 SSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RI 59
+SF+R NLKY+++ K K+ L+++ +IK ++ Q GIVYCL++ EC V L+ + +I
Sbjct: 391 TSFDRPNLKYKVVIKDPKDPLEQLGKIIKDDFARQCGIVYCLSKNECKDVCDYLSNKCKI 450
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
YHAGL+++ R VQ KW N+V V
Sbjct: 451 KTAFYHAGLSNRERVLVQNKWQKNEVQV 478
>gi|89889904|ref|ZP_01201415.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
gi|89518177|gb|EAS20833.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
Length = 719
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SF+R NL E+ P + L +V +K KY +SGI+YCL+RK C+ ++ L+ +
Sbjct: 192 YVASFDRPNLTLEVRPGNDRLAQVRRFLK-KYQDESGIIYCLSRKSCEKLSDKLSSLGFS 250
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+YHAGL + R VQ ++I +++ +
Sbjct: 251 VAAYHAGLEHRFRESVQEQFIKDEIKI 277
>gi|435850506|ref|YP_007312092.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
gi|433661136|gb|AGB48562.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
Length = 692
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SFNR NL Y++ PKK ++++ ++ K +SGI+YC +RK D + L + N
Sbjct: 192 YVASFNRKNLLYQVRPKKETYEQIVEFLR-KRKDKSGIIYCQSRKTVDELTGKLRKSGFN 250
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL+D R+ Q +I + +
Sbjct: 251 ALPYHAGLSDAARSRNQDIFIKDDAEI 277
>gi|434406622|ref|YP_007149507.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
gi|428260877|gb|AFZ26827.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
Length = 723
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K K E++ +I+ SGI+YCLTRK+ D + L ++I+
Sbjct: 203 IASFNRQNLYYEVRTKTKTAYAELLGIIRENQG--SGIIYCLTRKKVDELTLKLQHDKIS 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+SYHAGL D R++ Q ++I + V V
Sbjct: 261 VLSYHAGLTDDERSKNQTRFIRDDVRV 287
>gi|325982577|ref|YP_004294979.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. AL212]
gi|325532096|gb|ADZ26817.1| ATP-dependent DNA helicase RecQ [Nitrosomonas sp. AL212]
Length = 651
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 57/81 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N ++++ I+ ++ +GIVYCL+RK+ + + L ++ +N
Sbjct: 246 FVSSFDRPNIRYQIIDKTNSRSQLLAFIQTEHPSDAGIVYCLSRKKVEEITLWLVKQGLN 305
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG++ R+ Q K++
Sbjct: 306 AVAYHAGMSMHQRSLNQEKFL 326
>gi|340385864|ref|XP_003391428.1| PREDICTED: Bloom syndrome protein homolog, partial [Amphimedon
queenslandica]
Length = 159
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 1 FISSFNRANLKYEILPKK--NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NL Y + KK V +++I+LI + G++GIVYC +R++C++V + L
Sbjct: 84 FTQSFNRTNLAYSVRHKKPKKVTEDIITLINNNFKGETGIVYCFSRRDCETVCSDLNSAG 143
Query: 59 INAISYHAGLADKLRN 74
I ++ YHAGL D R+
Sbjct: 144 IASVIYHAGLPDHQRS 159
>gi|154150635|ref|YP_001404253.1| ATP-dependent DNA helicase RecQ [Methanoregula boonei 6A8]
gi|153999187|gb|ABS55610.1| ATP-dependent DNA helicase, RecQ family [Methanoregula boonei 6A8]
Length = 451
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+ SF R NL+Y ++ KKN L ++ I ++ +SGIVYCL++KE + AA L +
Sbjct: 210 FVGSFCRENLEYRVIKKKNPLVQLAD-ICCRHKNESGIVYCLSKKETEECAADLKKRGFT 268
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVV 93
A++YHAGL+ +R VQ ++ N + TV
Sbjct: 269 ALAYHAGLSRPVREAVQDAFLKNTSRIVCATVA 301
>gi|121609320|ref|YP_997127.1| ATP-dependent DNA helicase RecQ [Verminephrobacter eiseniae EF01-2]
gi|121553960|gb|ABM58109.1| ATP-dependent DNA helicase RecQ [Verminephrobacter eiseniae EF01-2]
Length = 622
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y I+ KK+ +++ I +++G++G+VYC +RK + +AA L+
Sbjct: 203 FISSFDRPNIRYTIVEKKDATAQLLRFIAREHAGEAGVVYCQSRKRVEELAATLSAAGHQ 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +LR Q +++
Sbjct: 263 ALPYHAGLDTRLRQFNQDRFL 283
>gi|42525842|ref|NP_970940.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 35405]
gi|449110443|ref|ZP_21747044.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 33521]
gi|449114749|ref|ZP_21751224.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 35404]
gi|41815892|gb|AAS10821.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 35405]
gi|448955570|gb|EMB36336.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 35404]
gi|448960366|gb|EMB41079.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 33521]
Length = 626
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FVAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|449106291|ref|ZP_21742959.1| ATP-dependent DNA helicase RecQ [Treponema denticola ASLM]
gi|451968003|ref|ZP_21921232.1| ATP-dependent DNA helicase RecQ [Treponema denticola US-Trep]
gi|448965486|gb|EMB46149.1| ATP-dependent DNA helicase RecQ [Treponema denticola ASLM]
gi|451703381|gb|EMD57756.1| ATP-dependent DNA helicase RecQ [Treponema denticola US-Trep]
Length = 626
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FVAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|408674061|ref|YP_006873809.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387855685|gb|AFK03782.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 792
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 13/105 (12%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK + K++I I A G+SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRKNLYYEIRPKIDSKKQLIKYI-ANNKGKSGIIYCLSRKKVEEIAGLLNVNGIK 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVVSKECDSVAAALA 105
A+ YHAGL R + Q ++ ++ECD + A +A
Sbjct: 261 ALPYHAGLDADTRMKNQDAFL------------NEECDIIVATIA 293
>gi|304311509|ref|YP_003811107.1| ATP-dependent DNA helicase [gamma proteobacterium HdN1]
gi|301797242|emb|CBL45462.1| ATP-dependent DNA helicase [gamma proteobacterium HdN1]
Length = 632
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSF+R N++Y I PK + K+++ ++ ++ SGIVYCL+R + D AA L+ E
Sbjct: 195 FTSSFDRPNIQYRITPKTSPRKQLLHFLRTEHPSDSGIVYCLSRSKVDDTAAWLSSEGFT 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAG ++R Q +++
Sbjct: 255 ALPYHAGQTQEMRALHQKRFL 275
>gi|254481263|ref|ZP_05094508.1| ATP-dependent DNA helicase RecQ [marine gamma proteobacterium
HTCC2148]
gi|214038426|gb|EEB79088.1| ATP-dependent DNA helicase RecQ [marine gamma proteobacterium
HTCC2148]
Length = 604
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 55/81 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI+ F+R N++Y I K+N ++++ +K ++ +GIVYCL+RK+ + +A L ++ N
Sbjct: 195 FIAGFDRPNIRYRISLKQNAKQQLLGFLKEEHPTDAGIVYCLSRKKTEDIAFWLQEQGFN 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R + Q +++
Sbjct: 255 ALPYHAGLDARIRADYQSRFL 275
>gi|170722968|ref|YP_001750656.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida W619]
gi|169760971|gb|ACA74287.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida W619]
Length = 714
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK++ K++++ + + G +GIVYCL+RK+ D AA L +
Sbjct: 196 FLSSFDRPNIFYRIVPKESPRKQLMAFLGER-RGNAGIVYCLSRKKVDETAAYLCDQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGLA + R+ Q ++++ +
Sbjct: 255 ALPYHAGLAAETRSANQHRFLNEE 278
>gi|86143313|ref|ZP_01061715.1| ATP-dependent DNA helicase recQ [Leeuwenhoekiella blandensis
MED217]
gi|85830218|gb|EAQ48678.1| ATP-dependent DNA helicase recQ [Leeuwenhoekiella blandensis
MED217]
Length = 704
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ E+ L ++ ++ K SGI+YCL+RK +SV+ +LA E I
Sbjct: 199 FISSFDRKNITLEVRAADKRLDQIKRFLE-KRPDTSGIIYCLSRKTTESVSTSLAAEGIK 257
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+ RN+VQ +I +K V TV
Sbjct: 258 ATCYHAGLSFDERNKVQEDFIYDKTQVVCATV 289
>gi|374375555|ref|ZP_09633213.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
gi|373232395|gb|EHP52190.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
Length = 751
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
FISSFNR NL YEI+PK K + ++ IK +SGI+Y L RK + +A L
Sbjct: 221 FISSFNRDNLYYEIVPKVSKKQTNESMVRFIKG-MKNKSGIIYTLNRKTTEELADILMAN 279
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A++YHAGL KLR E Q ++++ V V
Sbjct: 280 GIKAVAYHAGLDSKLRAERQDQFLNEDVQV 309
>gi|378822713|ref|ZP_09845458.1| ATP-dependent DNA helicase RecQ [Sutterella parvirubra YIT 11816]
gi|378598467|gb|EHY31610.1| ATP-dependent DNA helicase RecQ [Sutterella parvirubra YIT 11816]
Length = 607
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SF+R N+ Y ++ K+NV +++ I+ ++ G+ GIVYCL+R C+ +AA L IN
Sbjct: 197 LVASFDRPNIYYSVVEKRNVKDQLLRFIRNRHPGECGIVYCLSRANCELIAAHLEAAGIN 256
Query: 61 AISYHAGL 68
A++YHAG+
Sbjct: 257 ALAYHAGM 264
>gi|449117321|ref|ZP_21753763.1| ATP-dependent DNA helicase RecQ [Treponema denticola H-22]
gi|448951714|gb|EMB32524.1| ATP-dependent DNA helicase RecQ [Treponema denticola H-22]
Length = 626
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FVAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|449107912|ref|ZP_21744557.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 33520]
gi|449118594|ref|ZP_21754999.1| ATP-dependent DNA helicase RecQ [Treponema denticola H1-T]
gi|449120988|ref|ZP_21757341.1| ATP-dependent DNA helicase RecQ [Treponema denticola MYR-T]
gi|448951641|gb|EMB32452.1| ATP-dependent DNA helicase RecQ [Treponema denticola MYR-T]
gi|448952536|gb|EMB33339.1| ATP-dependent DNA helicase RecQ [Treponema denticola H1-T]
gi|448962281|gb|EMB42972.1| ATP-dependent DNA helicase RecQ [Treponema denticola ATCC 33520]
Length = 626
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FVAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|449125135|ref|ZP_21761451.1| ATP-dependent DNA helicase RecQ [Treponema denticola OTK]
gi|448940319|gb|EMB21228.1| ATP-dependent DNA helicase RecQ [Treponema denticola OTK]
Length = 626
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FVAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|449130154|ref|ZP_21766378.1| ATP-dependent DNA helicase RecQ [Treponema denticola SP37]
gi|448943756|gb|EMB24642.1| ATP-dependent DNA helicase RecQ [Treponema denticola SP37]
Length = 626
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FVAGFNRKNIFLEVKEKQKPFEQASDFLK-EHKGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|443243562|ref|YP_007376787.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
gi|442800961|gb|AGC76766.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
Length = 720
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SF+R NL E+ P N L+++ +K K +SGI+YCL+RK C+S+A+ L +
Sbjct: 192 YVASFDRPNLTLEVRPGNNRLQQMRRFLK-KNKDESGIIYCLSRKTCESIASKLTAYGFD 250
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL+ + R VQ +I + + +
Sbjct: 251 AAAYHAGLSHEERENVQEIFIKDDLKI 277
>gi|408399479|gb|EKJ78580.1| hypothetical protein FPSE_01246 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK + ++ + SLI++ Y+ +SGIVY ++RK + VA +L+
Sbjct: 1025 FSQSFNRPNLYYEVRPKSTGEKTIESIASLIQSNYANKSGIVYTISRKSAEKVAESLSDS 1084
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG + + +VQ W +V V
Sbjct: 1085 GITARHYHAGCDPQEKVDVQNAWQRGQVKV 1114
>gi|344266668|ref|XP_003405402.1| PREDICTED: ATP-dependent DNA helicase Q1 [Loxodonta africana]
Length = 648
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y GQSGI+YC ++K+ + V +L
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQN 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + V KW ++++ V TV
Sbjct: 337 LGIHAGAYHANMEPEDKTRVHRKWSASEIQVVVATV 372
>gi|46107336|ref|XP_380727.1| hypothetical protein FG00551.1 [Gibberella zeae PH-1]
Length = 1672
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK + ++ + SLI++ Y+ +SGIVY ++RK + VA +L+
Sbjct: 1024 FSQSFNRPNLYYEVRPKSTGEKTIESIASLIQSNYANKSGIVYTISRKSAEKVAESLSDS 1083
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAG + + +VQ W +V V
Sbjct: 1084 GITARHYHAGCDPQEKVDVQNAWQRGQVKV 1113
>gi|319790871|ref|YP_004152511.1| ATP-dependent DNA helicase recq [Variovorax paradoxus EPS]
gi|315593334|gb|ADU34400.1| ATP-dependent DNA helicase RecQ [Variovorax paradoxus EPS]
Length = 631
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ KK+ +++ I+ ++ G +G+VYC +RK + +A L IN
Sbjct: 217 FVSSFDRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDLATTLQGAGIN 276
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R + Q +++
Sbjct: 277 ALPYHAGLDAAVRQKHQDRFL 297
>gi|302782143|ref|XP_002972845.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
gi|300159446|gb|EFJ26066.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
Length = 602
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 3 SSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RI 59
+SF+R NLKY+++ K K+ L+++ +IK ++ Q GIVYCL++ EC V L+ + +I
Sbjct: 389 TSFDRPNLKYKVVIKDPKDPLEQLGKIIKDDFARQCGIVYCLSKNECRDVCDYLSNKCKI 448
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
YHAGL+++ R VQ KW N+V V
Sbjct: 449 KTAFYHAGLSNRERVLVQNKWQKNEVQV 476
>gi|409422690|ref|ZP_11259777.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. HYS]
Length = 712
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + G +GIVYCL+RK+ D VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLGER-RGNAGIVYCLSRKKVDDVAAYLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R Q ++++ +
Sbjct: 255 ALPYHAGLPAETRASNQRRFLNEE 278
>gi|73668704|ref|YP_304719.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
gi|72395866|gb|AAZ70139.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
Length = 881
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SFNR NL YE+ PKK E+ ++ ++ G++GI+YC +R +++ L
Sbjct: 205 YVASFNRKNLYYEVRPKKETFSEITDYLR-RHRGEAGIIYCQSRNSVEALTKKLNLAGFR 263
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL+D RN Q +I + V +
Sbjct: 264 ALPYHAGLSDTERNRNQEMFIKDDVEI 290
>gi|218130244|ref|ZP_03459048.1| hypothetical protein BACEGG_01832 [Bacteroides eggerthii DSM 20697]
gi|217987528|gb|EEC53856.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 604
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 1 FISSFNRANLKYEI---LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
FISSF+R NL + +K K +I I A++ G+SGI+YC++R + +SVA L ++
Sbjct: 191 FISSFDRPNLSLTVKRGYQQKEKSKAIIDFI-ARHPGESGIIYCMSRSKTESVAQMLQKQ 249
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A YHAGL+ R+E Q +I+++V V T+
Sbjct: 250 GIRAAVYHAGLSPTRRDEAQDDFINDRVQVVCATI 284
>gi|398844908|ref|ZP_10601959.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM84]
gi|398254116|gb|EJN39222.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM84]
Length = 714
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK++ K++++ + + G +GIVYCL+RK+ D AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKESPRKQLMAFLGER-RGNAGIVYCLSRKKVDETAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGLA + R Q ++++ +
Sbjct: 255 ALPYHAGLAAETRAANQHRFLNEE 278
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK + +++ IK + +GIVYC++RK D VA L ++ IN
Sbjct: 203 IASFNRPNLYYEVQPKTSKSYQQLYQYIKGQKG--AGIVYCISRKTVDKVAEQLQKDGIN 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ D+ R+ Q ++I + V +
Sbjct: 261 ALPYHAGMEDRERSNNQTRFIRDDVQI 287
>gi|299741849|ref|XP_001832077.2| DNA helicase [Coprinopsis cinerea okayama7#130]
gi|298404912|gb|EAU89723.2| DNA helicase [Coprinopsis cinerea okayama7#130]
Length = 1129
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLK-EVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
I SFNR NL Y+++ K K E+ + IK Y G+SGIVYC ++ C+++A L + I
Sbjct: 557 LIQSFNRQNLSYKVVQKSPRFKFEISNEIKDHYPGKSGIVYCRAKQTCENIAQFLKTQGI 616
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAG+ R+ V W N++ V
Sbjct: 617 IAAYYHAGMEKDDRHRVATDWQENRIQV 644
>gi|104782918|ref|YP_609416.1| ATP-dependent DNA helicase [Pseudomonas entomophila L48]
gi|95111905|emb|CAK16629.1| ATP-dependent DNA helicase [Pseudomonas entomophila L48]
Length = 715
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK++ K++++ + + G +GIVYCL+RK+ D AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKESPRKQLMAFLGER-RGNAGIVYCLSRKKVDETAAFLCEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGLA + R Q ++++ +
Sbjct: 255 ALPYHAGLAAETRAANQHRFLNEE 278
>gi|398992136|ref|ZP_10695179.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM24]
gi|399016533|ref|ZP_10718747.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM16]
gi|398105039|gb|EJL95160.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM16]
gi|398133796|gb|EJM22978.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM24]
Length = 709
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++LR Q ++++ +
Sbjct: 255 ALPYHAGLPNELRAFNQKRFLNEE 278
>gi|317477615|ref|ZP_07936833.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316906220|gb|EFV27956.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 604
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 1 FISSFNRANLKYEI---LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
FISSF+R NL + +K K +I I A++ G+SGI+YC++R + +SVA L ++
Sbjct: 191 FISSFDRPNLSLTVKRGYQQKEKSKAIIDFI-ARHPGESGIIYCMSRSKTESVAQMLQKQ 249
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A YHAGL+ R+E Q +I+++V V T+
Sbjct: 250 GIRAAVYHAGLSPTRRDEAQDDFINDRVQVVCATI 284
>gi|413920232|gb|AFW60164.1| hypothetical protein ZEAMMB73_604033 [Zea mays]
Length = 618
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SF+R NL YE++ K K K++ L+K ++ +SGIVYCL++ EC A L ++ +I
Sbjct: 408 SFDRLNLNYEVIGKTKTFQKQLGDLLKERFMNESGIVYCLSKNECADTAKFLREKYKIKC 467
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
YHA LA + R VQ KW S +V V
Sbjct: 468 AHYHASLAARQRTSVQEKWHSGEVKV 493
>gi|367043916|ref|XP_003652338.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
gi|346999600|gb|AEO66002.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
Length = 1637
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER- 58
F SFNR NL YE++ K+ ++ + +I KY GQSGIVY L+RK + A+ LA +
Sbjct: 897 FSQSFNRPNLYYEVIEKQTRFIQGMGEMITKKYPGQSGIVYTLSRKSAEGTASTLATKHG 956
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + + EVQ KW ++HV
Sbjct: 957 IKARYYHAMMDPESKAEVQRKWQEGEIHV 985
>gi|445499562|ref|ZP_21466417.1| ATP-dependent DNA helicase recQ [Janthinobacterium sp. HH01]
gi|444789557|gb|ELX11105.1| ATP-dependent DNA helicase recQ [Janthinobacterium sp. HH01]
Length = 607
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y+I+ K N K+++ I ++ G GIVYCL+RK+ + A L + +
Sbjct: 201 FVSSFDRPNIRYQIVEKANGRKQLLDFITTEHGGDCGIVYCLSRKKVEETAEFLNENGVR 260
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A++YHAG+ R Q K++
Sbjct: 261 AMAYHAGMDHAKRAANQAKFL 281
>gi|426410842|ref|YP_007030941.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. UW4]
gi|426269059|gb|AFY21136.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. UW4]
Length = 708
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|30250483|ref|NP_842553.1| ATP-dependent DNA helicase RecQ [Nitrosomonas europaea ATCC 19718]
gi|30139324|emb|CAD86476.1| ATP-dependent DNA helicase RecQ [Nitrosomonas europaea ATCC 19718]
Length = 549
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R NL Y I + N ++++ I+++++G++GIVYC +R++ + AA L I
Sbjct: 196 FISSFDRPNLCYRITARSNSRIQLLNFIRSQHAGEAGIVYCQSRRKVEETAAWLNSNHIP 255
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTVV 93
A++YHAG+ +R Q K++ GH V+
Sbjct: 256 ALAYHAGMETSIRTRHQKKFLQ-----GHGIVM 283
>gi|209882405|ref|XP_002142639.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
gi|209558245|gb|EEA08290.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
Length = 997
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F SF+R NL+YE+ PK ++KEV +I +K+S + I+YCL+R EC+ + L +
Sbjct: 412 FALSFDRPNLRYEVRPKIGNKAKLVKEVTEII-SKFSHSTCIIYCLSRSECEDICKELIK 470
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A YH + D+ RN Q +W+S++ V
Sbjct: 471 NGISATYYHGSMKDEKRNIAQKQWMSDEKQV 501
>gi|71017581|ref|XP_759021.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
gi|46098743|gb|EAK83976.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
Length = 1291
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 3 SSFNRANLKYEIL--PKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
SSFNR NL+Y++ PK ++ E+ S I + + GIVYC +R+ C++VA L + I
Sbjct: 607 SSFNRPNLEYQVRKKPKSKLIDEIASFILTSHKDECGIVYCFSRESCETVADDLKKHGIT 666
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHA L R++VQ +W + + V
Sbjct: 667 AHHYHAKLGKDDRSKVQQRWKNGEYKV 693
>gi|39937884|ref|NP_950160.1| DNA helicase [Rhodopseudomonas palustris CGA009]
gi|39651744|emb|CAE30266.1| DNA helicase [Rhodopseudomonas palustris CGA009]
Length = 616
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K+N ++ + I ++ G SG+VYCL+R + + +A L++ +
Sbjct: 208 FVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHRGHSGVVYCLSRAKVEDIAETLSKSGLT 267
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL +R Q ++++
Sbjct: 268 ALPYHAGLPPDVRARNQDRFLN 289
>gi|358458638|ref|ZP_09168846.1| ATP-dependent DNA helicase RecQ [Frankia sp. CN3]
gi|357078161|gb|EHI87612.1| ATP-dependent DNA helicase RecQ [Frankia sp. CN3]
Length = 641
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ F+R N+ Y I+PKK ++++ L++ +++G +GIVYCL+R + A L I
Sbjct: 224 FVADFDRPNISYRIVPKKEPKRQLLDLLRTEHAGDAGIVYCLSRSSVEQTADFLVTNGIA 283
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 284 ALPYHAGLDSRVRATNQSRFL 304
>gi|45383374|ref|NP_989724.1| ATP-dependent DNA helicase Q1 [Gallus gallus]
gi|23503565|dbj|BAC20377.1| RECQL1 protein [Gallus gallus]
Length = 661
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y G SGIVYC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRHKPSNNEDFIEDIVKLINGRYKGLSGIVYCFSQKDSEQVTVSLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + K + +V W +N++ V TV
Sbjct: 337 LGIKAGTYHANMDAKYKTKVHKGWAANQIQVVVATV 372
>gi|449127039|ref|ZP_21763313.1| ATP-dependent DNA helicase RecQ [Treponema denticola SP33]
gi|448944707|gb|EMB25584.1| ATP-dependent DNA helicase RecQ [Treponema denticola SP33]
Length = 626
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++ FNR N+ E+ K+ ++ +K ++ G+SGI+YC +RK+ D++A L+ N
Sbjct: 208 FVAGFNRKNIFLEVKEKQKSFEQASEFLK-EHRGESGIIYCFSRKQADTLAVQLSVLGYN 266
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAGL+D+LR + Q +I++ + + TV
Sbjct: 267 AKPYHAGLSDELRQKTQNDFINDDIEIIVATV 298
>gi|384098146|ref|ZP_09999265.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
gi|383836292|gb|EID75705.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
Length = 733
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK KNV ++I IK + G+SGI+YCL+RK + +A L I
Sbjct: 203 FKASFNRPNLYYEVRPKTKNVDADIIRFIK-QNPGKSGIIYCLSRKRVEELAQVLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 262 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 289
>gi|421617431|ref|ZP_16058420.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri KOS6]
gi|409780586|gb|EKN60213.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri KOS6]
Length = 707
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYC++RK+ D +AA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCMSRKKVDDLAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL LR Q ++++ +
Sbjct: 255 ALPYHAGLPSDLRAYHQKRFLNEE 278
>gi|374290851|ref|YP_005037886.1| ATP-dependent DNA helicase [Azospirillum lipoferum 4B]
gi|357422790|emb|CBS85631.1| ATP-dependent DNA helicase [Azospirillum lipoferum 4B]
Length = 642
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 56/84 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y ++PKK+ +++++ ++ + +GIVYC++R + + VAA L Q+
Sbjct: 215 FLSSFDRPNITYRVVPKKSERQQMLAFLRENHPEDAGIVYCMSRNKVEDVAAWLNQQGRE 274
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL +R Q ++I ++
Sbjct: 275 ALPYHAGLPADVREANQDRFIKSE 298
>gi|381186153|ref|ZP_09893727.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379651827|gb|EIA10388.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 731
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K KNV ++I IK ++ G+SGI+YCL+RK+ +++A L I
Sbjct: 202 FKASFNRPNLYYEVRTKTKNVESDIIRFIK-QHKGKSGIIYCLSRKKVEAIAHVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRARHQDMFLMEDVDV 288
>gi|332878105|ref|ZP_08445835.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047651|ref|ZP_09109249.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332684067|gb|EGJ56934.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529339|gb|EHG98773.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ K KNV K++I IK + G+SGI+Y L+RK + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRNKTKNVDKDIIRFIKQR-PGKSGIIYALSRKRVEELAEILRANDI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R++ Q +I ++ V
Sbjct: 260 NARAYHAGMDSATRSQTQDDFIMERIDV 287
>gi|383810866|ref|ZP_09966350.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356505|gb|EID34005.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ K+ + K++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRAKRSDDDTSKQIIKFIK-QHTGKSGIIYCLSRKKVEELAAILQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ ++ V
Sbjct: 260 DIKAAPYHAGLDSETRSKTQDDFLMEELDV 289
>gi|449015395|dbj|BAM78797.1| ATP-dependent DNA helicase RecQ [Cyanidioschyzon merolae strain 10D]
Length = 1603
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 1 FISSFNRANLKYEIL---PKKNVLKEVISLIKAKY-SGQSGIVYCLTRKECDSVAAALAQ 56
F SFNR N+ YE+ P+ ++ + I+ + G SGI+YC +++EC+ VA AL +
Sbjct: 972 FKQSFNRPNISYEVYLKGPRSKTVEWIAEFIQNEMPRGASGIIYCFSKQECEDVAKALRR 1031
Query: 57 E-RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ RI A YHAGL D+ R VQ +W+ V
Sbjct: 1032 QFRIAAEHYHAGLTDESRIAVQQRWMRRATQV 1063
>gi|440680362|ref|YP_007155157.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
gi|428677481|gb|AFZ56247.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
Length = 724
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ K K E++ +++ SGI+YCLTRK+ D + L ++++
Sbjct: 203 IASFNRQNLYYEVRAKSKRAYAEILEIVRENEG--SGIIYCLTRKKVDELTFKLQKDKVA 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAGL+D R++ Q ++I + V V T+
Sbjct: 261 ALPYHAGLSDDERSKNQTRFIRDDVRVMVATI 292
>gi|348569184|ref|XP_003470378.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Cavia porcellus]
Length = 650
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y G+SGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGKSGIIYCFSQKDSEQVTISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTRWSANELQVVVATV 372
>gi|347536771|ref|YP_004844196.1| ATP-dependent DNA helicase RecQ [Flavobacterium branchiophilum
FL-15]
gi|345529929|emb|CCB69959.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium branchiophilum
FL-15]
Length = 731
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K KN+ ++I IK + G+SGI+YCL+RK+ +S+A L I
Sbjct: 202 FKASFNRPNLFYEVRTKTKNIESDIIRFIK-QNKGKSGIIYCLSRKKVESIAEVLKVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVEV 288
>gi|29831394|ref|NP_826028.1| ATP-dependent DNA helicase [Streptomyces avermitilis MA-4680]
gi|29608509|dbj|BAC72563.1| putative ATP-dependent DNA helicase [Streptomyces avermitilis
MA-4680]
Length = 658
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++S + +++G +GIVYCL+R + A L++ I
Sbjct: 203 FVASFDRPNIQYRIVPKADPKKQLLSFLSDEHAGDAGIVYCLSRNSVEKTAEFLSRNGIE 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 263 AVPYHAGLDAGTRAAHQSRFL 283
>gi|427416527|ref|ZP_18906710.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
gi|425759240|gb|EKV00093.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
Length = 736
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F+S FNR NL YE+ PK K ++ L+K + SG +GI+YCL+RK + +A L Q+ I
Sbjct: 208 FVSGFNRQNLYYEVTPKTKQSYDHLLKLVKQQ-SG-AGIIYCLSRKRVNEIAFRLKQDGI 265
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL+ K R Q ++I + V +
Sbjct: 266 SALPYHAGLSAKERQGNQEQFIRDDVRI 293
>gi|86140388|ref|ZP_01058947.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85832330|gb|EAQ50779.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 733
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YEI PK KNV ++I +K + G+SGI+YCL+RK + +A L I
Sbjct: 203 FKASFNRPNLYYEIRPKTKNVDADIIRFVK-QNQGKSGIIYCLSRKRVEELAQVLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 262 SAVPYHAGLDAKSRVKHQDMFLMEDVDV 289
>gi|398872899|ref|ZP_10628175.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM74]
gi|398201425|gb|EJM88305.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM74]
Length = 708
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|398897300|ref|ZP_10648073.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM55]
gi|398177080|gb|EJM64773.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM55]
Length = 708
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|398920745|ref|ZP_10659470.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM49]
gi|398167486|gb|EJM55547.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM49]
Length = 708
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|398953727|ref|ZP_10675518.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM33]
gi|398153426|gb|EJM41926.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM33]
Length = 708
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|398962918|ref|ZP_10679405.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM30]
gi|398150315|gb|EJM38913.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM30]
Length = 709
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|348537236|ref|XP_003456101.1| PREDICTED: ATP-dependent DNA helicase Q1 [Oreochromis niloticus]
Length = 651
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 3 SSFNRANLKYEILPKKN----VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
+SFNR NL YE+ K + + ++ +LIK+KY QSGIVY ++K+ + V+A L +
Sbjct: 298 ASFNRTNLYYEVRIKDSDSEASVNDIAALIKSKYKDQSGIVYVFSQKDAELVSAELQKRD 357
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + ++ V KW SNK+ V
Sbjct: 358 ILAYPYHANMDSEDKSRVHRKWTSNKIQV 386
>gi|291437924|ref|ZP_06577314.1| helicase [Streptomyces ghanaensis ATCC 14672]
gi|291340819|gb|EFE67775.1| helicase [Streptomyces ghanaensis ATCC 14672]
Length = 657
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K++++ ++ +++G +GIVYCL+R + A L + I
Sbjct: 206 FVASFDRPNIQYRIVPKADPKKQLLAFLREEHAGDAGIVYCLSRNSVEKTAEFLTRNGIE 265
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 266 AVPYHAGLDAGTRAAHQARFL 286
>gi|290490728|dbj|BAI79324.1| RecQ1 helicae [Gallus gallus]
Length = 607
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y G SGIVYC ++K+ + V +L +
Sbjct: 237 FTASFNRPNLYYEVRHKPSNNEDFIEDIVKLINGRYKGLSGIVYCFSQKDSEQVTVSLQK 296
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTVV 93
I A +YHA + K + +V W +N++ V TV
Sbjct: 297 LGIKAGTYHANMDAKYKTKVHKGWAANQIQVVVATVA 333
>gi|167765436|ref|ZP_02437549.1| hypothetical protein BACSTE_03826 [Bacteroides stercoris ATCC
43183]
gi|167697064|gb|EDS13643.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV K++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDKDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|326368214|ref|NP_001191835.1| ATP-dependent DNA helicase Q1 isoform 2 [Mus musculus]
Length = 634
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|317475725|ref|ZP_07934984.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316908108|gb|EFV29803.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV K++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDKDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL Y++ K K L E+ ++I +Y Q+GI+YC ++ C+ +A L Q I
Sbjct: 731 FKQSFNRTNLFYKVQVKTKTHLDEITNMINGQYRNQTGIIYCHSKNSCEQTSARLIQNGI 790
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ + R VQ W S+K+ V
Sbjct: 791 KCSFYHAGMTTEDRFAVQSAWQSDKIRV 818
>gi|74203917|dbj|BAE28550.1| unnamed protein product [Mus musculus]
Length = 634
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|4579746|dbj|BAA75086.1| DNA helicase Q1 [Mus musculus]
Length = 631
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|424922003|ref|ZP_18345364.1| RecQ [Pseudomonas fluorescens R124]
gi|404303163|gb|EJZ57125.1| RecQ [Pseudomonas fluorescens R124]
Length = 709
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|347822016|ref|ZP_08875450.1| ATP-dependent DNA helicase RecQ, partial [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 558
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y I+ KK+ ++ I +++G++G+VYC +RK + +AA L+
Sbjct: 196 FISSFDRPNIHYTIVEKKDATAQLQRFIAREHAGEAGVVYCQSRKRVEELAATLSAAGHT 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL KLR Q +++
Sbjct: 256 ALPYHAGLDSKLRQNHQDRFL 276
>gi|288959399|ref|YP_003449740.1| ATP-dependent DNA helicase [Azospirillum sp. B510]
gi|288911707|dbj|BAI73196.1| ATP-dependent DNA helicase [Azospirillum sp. B510]
Length = 640
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 57/84 (67%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y ++PKK+ +++++ ++ + +GI+YC++R + + VAA L Q+
Sbjct: 215 FLSSFDRPNITYRVVPKKSERQQMLAFLRDNHPEDAGIIYCMSRNKVEEVAAWLNQQGRE 274
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++R Q ++I ++
Sbjct: 275 ALPYHAGLPAEVREANQDRFIKSE 298
>gi|329957341|ref|ZP_08297861.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328523054|gb|EGF50157.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV K++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDKDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|218128449|ref|ZP_03457253.1| hypothetical protein BACEGG_00017 [Bacteroides eggerthii DSM 20697]
gi|217989340|gb|EEC55653.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV K++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDKDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|148678690|gb|EDL10637.1| RecQ protein-like, isoform CRA_a [Mus musculus]
Length = 645
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|260591259|ref|ZP_05856717.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
gi|260537124|gb|EEX19741.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ K+ + K++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRAKRSDDDTSKQIIKFIK-QHTGKSGIIYCLSRKKVEELAAILQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R++ Q ++ ++ V
Sbjct: 260 DIKAAPYHAGLDSETRSKTQDDFLMEELDV 289
>gi|15928520|gb|AAH14735.1| RecQ protein-like [Mus musculus]
Length = 648
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|325284946|ref|YP_004260736.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
gi|324320400|gb|ADY27865.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
Length = 733
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK +N+ ++I +K G+SGIVYCL+RK+ + +A L I
Sbjct: 203 FKASFNRPNLFYEVRPKTQNIEADIIRFVKQNV-GKSGIVYCLSRKKVEELAQVLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAG K R+ Q ++ +V V
Sbjct: 262 SAVPYHAGFDAKTRSRYQDMFLMEEVDV 289
>gi|4579744|dbj|BAA75085.1| DNA helicase Q1 [Mus musculus]
Length = 648
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|34495932|ref|NP_900147.1| ATP-dependent DNA helicase RecQ [Chromobacterium violaceum ATCC
12472]
gi|34101786|gb|AAQ58154.1| ATP-dependent DNA helicase recQ [Chromobacterium violaceum ATCC
12472]
Length = 609
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R NL Y+++ K N K+++ I+ ++ G +GIVYCL+RK + A L + I
Sbjct: 206 FLSSFDRPNLFYQVVEKHNAKKQLLDFIRQEHQGATGIVYCLSRKRVEDTAQWLRENGIE 265
Query: 61 AISYHAGLADKLRNEVQ 77
A++YHAG++ R Q
Sbjct: 266 ALAYHAGMSHAEREANQ 282
>gi|330996065|ref|ZP_08319959.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
gi|329574062|gb|EGG55640.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ K KNV K++I IK + G+SGI+Y L+RK + +A L I
Sbjct: 201 FKSSFNRPNLYYEVRNKTKNVDKDIIRFIKQR-PGKSGIIYALSRKRVEELAEILRANDI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R++ Q +I ++ V
Sbjct: 260 NARAYHAGMDSATRSQTQDDFIMERIDV 287
>gi|269796291|ref|YP_003315746.1| ATP-dependent DNA helicase RecQ [Sanguibacter keddieii DSM 10542]
gi|269098476|gb|ACZ22912.1| ATP-dependent DNA helicase RecQ [Sanguibacter keddieii DSM 10542]
Length = 617
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I PK N +++ L++ ++ G +GIVYCL+R + A L + I
Sbjct: 204 FVASFDRPNIQYRIAPKDNPRAQLLDLLRTEHPGDAGIVYCLSRNSVEQTAEHLVAQGIP 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 264 ALPYHAGLPAHVRAANQSRFL 284
>gi|134099870|ref|YP_001105531.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338]
gi|291006092|ref|ZP_06564065.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338]
gi|133912493|emb|CAM02606.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338]
Length = 608
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K+ K+++ L++ +++G+SGIVYCL+R + A L I
Sbjct: 204 FVASFDRPNIQYRIVAKREPRKQLLELLRGEHAGESGIVYCLSRASVEKTAQFLVDNGIE 263
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 264 ALPYHAGLDAATRAANQARFL 284
>gi|408491728|ref|YP_006868097.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
gi|408469003|gb|AFU69347.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
Length = 728
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL YEI PK +V ++I +K K SG+SGI+YCL+RK + ++ AL +
Sbjct: 201 FKDSFNRPNLYYEIRPKTDDVDSDIIKFVK-KNSGKSGIIYCLSRKRVEQLSQALQVNGV 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R+ Q ++ + V
Sbjct: 260 KAVPYHAGLDAKSRSRHQDMFLMEDIDV 287
>gi|270295711|ref|ZP_06201911.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270273115|gb|EFA18977.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV +++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDRDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|326368226|ref|NP_001191836.1| ATP-dependent DNA helicase Q1 isoform 3 [Mus musculus]
gi|74209854|dbj|BAE23625.1| unnamed protein product [Mus musculus]
gi|148678693|gb|EDL10640.1| RecQ protein-like, isoform CRA_d [Mus musculus]
Length = 631
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|302559093|ref|ZP_07311435.1| ATP-dependent DNA helicase RecQ [Streptomyces griseoflavus Tu4000]
gi|302476711|gb|EFL39804.1| ATP-dependent DNA helicase RecQ [Streptomyces griseoflavus Tu4000]
Length = 649
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++ ++ +++G +GIVYCL+R + A L++ +
Sbjct: 199 FVASFDRPNIQYRIVPKADPRKQLLGFLRGEHAGDAGIVYCLSRNSVEKTAEFLSRNGVE 258
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 259 AVPYHAGLDAGTRAAHQARFL 279
>gi|110625690|ref|NP_075529.2| ATP-dependent DNA helicase Q1 isoform 1 [Mus musculus]
gi|341941960|sp|Q9Z129.2|RECQ1_MOUSE RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|74215762|dbj|BAE23422.1| unnamed protein product [Mus musculus]
gi|74216639|dbj|BAE37751.1| unnamed protein product [Mus musculus]
gi|148678691|gb|EDL10638.1| RecQ protein-like, isoform CRA_b [Mus musculus]
Length = 648
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 277 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 337 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 372
>gi|356531519|ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Glycine max]
Length = 695
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKY-SGQSGIVYCLTRKECDSVAAALA 55
F+S+ NR NL Y + K K V+ E+ I+ Y + +SGIVYC +RKEC+ VA L
Sbjct: 273 FVSTVNRPNLFYMVKEKSSVGKVVIDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELR 332
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ I+A YHA + R +V M+W +NK+ V TV
Sbjct: 333 ERGISADYYHADMDVNAREKVHMRWSNNKLQVIVGTV 369
>gi|148678692|gb|EDL10639.1| RecQ protein-like, isoform CRA_c [Mus musculus]
Length = 662
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ ++++ LI +Y GQSGI+YC ++K+ + + +L +
Sbjct: 291 FTASFNRPNLFYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQK 350
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I+A +YHA + + + +V +W +N++ V TV
Sbjct: 351 LGIHAGTYHANMEPEDKTKVHTQWSANELQVVVATV 386
>gi|358387252|gb|EHK24847.1| hypothetical protein TRIVIDRAFT_212358 [Trichoderma virens Gv29-8]
Length = 1658
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK + V +++ +LI +KY +GIVY ++RK+ + VA L+
Sbjct: 974 FSQSFNRPNLYYEVRPKSSNPVVTQQIAALINSKYPNVTGIVYTISRKQAEDVAQKLSDN 1033
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + EVQ W +V V
Sbjct: 1034 GITARHYHAAITPTEKVEVQTAWQKGQVKV 1063
>gi|160890574|ref|ZP_02071577.1| hypothetical protein BACUNI_03017 [Bacteroides uniformis ATCC 8492]
gi|317479884|ref|ZP_07939001.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|423304003|ref|ZP_17282002.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423307273|ref|ZP_17285263.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|156859573|gb|EDO53004.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
gi|316903958|gb|EFV25795.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|392685931|gb|EIY79239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392690525|gb|EIY83788.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV +++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDRDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|427385455|ref|ZP_18881762.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425727099|gb|EKU89960.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV +++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTNNVDRDIIKFIKNNQE-KSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|421153375|ref|ZP_15612923.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa ATCC 14886]
gi|404523775|gb|EKA34171.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa ATCC 14886]
Length = 712
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + + G +GIVYCL+RK+ + VA L +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFLSER-RGDAGIVYCLSRKKVEEVAEFLGNQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL+++LR Q ++++ +
Sbjct: 255 ALPYHAGLSNELRAHHQKRFLNEE 278
>gi|429214436|ref|ZP_19205599.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. M1]
gi|428154722|gb|EKX01272.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. M1]
Length = 714
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + A+ G +GIVYCL+RK+ + VA L+ +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFL-AERRGDAGIVYCLSRKKVEEVAEFLSNQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL+++LR Q ++++ +
Sbjct: 255 ALPYHAGLSNELRAFHQKRFLNEE 278
>gi|421166499|ref|ZP_15624752.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa ATCC
700888]
gi|404538172|gb|EKA47723.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa ATCC
700888]
Length = 712
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + + G +GIVYCL+RK+ + VA L +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFLSER-RGDAGIVYCLSRKKVEEVAEFLGNQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL+++LR Q ++++ +
Sbjct: 255 ALPYHAGLSNELRAHHQKRFLNEE 278
>gi|302553440|ref|ZP_07305782.1| ATP-dependent DNA helicase RecQ [Streptomyces viridochromogenes DSM
40736]
gi|302471058|gb|EFL34151.1| ATP-dependent DNA helicase RecQ [Streptomyces viridochromogenes DSM
40736]
Length = 671
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++S ++ +++G +GIVYCL+R + A L + +
Sbjct: 219 FVASFDRPNIQYRIVPKADPKKQLLSFLREEHAGDAGIVYCLSRNSVEKTAEFLNRNGVE 278
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 279 AVPYHAGLDAGTRAAHQSRFL 299
>gi|15598540|ref|NP_252034.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PAO1]
gi|107102876|ref|ZP_01366794.1| hypothetical protein PaerPA_01003944 [Pseudomonas aeruginosa PACS2]
gi|116051359|ref|YP_789808.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890460|ref|YP_002439324.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa LESB58]
gi|254236306|ref|ZP_04929629.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa C3719]
gi|254242031|ref|ZP_04935353.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 2192]
gi|313108694|ref|ZP_07794690.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 39016]
gi|355640536|ref|ZP_09051793.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. 2_1_26]
gi|386057688|ref|YP_005974210.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa M18]
gi|386067380|ref|YP_005982684.1| ATP-dependent DNA helicase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982918|ref|YP_006481505.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa DK2]
gi|416854979|ref|ZP_11911253.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 138244]
gi|416873649|ref|ZP_11917645.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 152504]
gi|418584708|ref|ZP_13148766.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa MPAO1/P1]
gi|418589750|ref|ZP_13153670.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa MPAO1/P2]
gi|419755049|ref|ZP_14281407.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa
PADK2_CF510]
gi|420138800|ref|ZP_14646681.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa CIG1]
gi|421159224|ref|ZP_15618385.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa ATCC 25324]
gi|421173433|ref|ZP_15631180.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa CI27]
gi|421179493|ref|ZP_15637081.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa E2]
gi|421517882|ref|ZP_15964556.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PAO579]
gi|424942725|ref|ZP_18358488.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa NCMG1179]
gi|451986036|ref|ZP_21934231.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 18A]
gi|9949477|gb|AAG06732.1|AE004757_1 ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PAO1]
gi|115586580|gb|ABJ12595.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168237|gb|EAZ53748.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa C3719]
gi|126195409|gb|EAZ59472.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 2192]
gi|218770683|emb|CAW26448.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa LESB58]
gi|310881192|gb|EFQ39786.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 39016]
gi|334843474|gb|EGM22063.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 138244]
gi|334844559|gb|EGM23132.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 152504]
gi|346059171|dbj|GAA19054.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa NCMG1179]
gi|347303994|gb|AEO74108.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa M18]
gi|348035939|dbj|BAK91299.1| ATP-dependent DNA helicase [Pseudomonas aeruginosa NCGM2.S1]
gi|354831286|gb|EHF15307.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. 2_1_26]
gi|375045415|gb|EHS37998.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa MPAO1/P1]
gi|375051408|gb|EHS43876.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa MPAO1/P2]
gi|384398867|gb|EIE45272.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa
PADK2_CF510]
gi|392318423|gb|AFM63803.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa DK2]
gi|403248423|gb|EJY61998.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa CIG1]
gi|404347364|gb|EJZ73713.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PAO579]
gi|404535848|gb|EKA45511.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa CI27]
gi|404547053|gb|EKA56074.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa E2]
gi|404548068|gb|EKA57041.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa ATCC 25324]
gi|451756316|emb|CCQ86754.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa 18A]
gi|453047631|gb|EME95345.1| ATP-dependent DNA helicase RecQ [Pseudomonas aeruginosa PA21_ST175]
Length = 712
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K+++ + + G +GIVYCL+RK+ + VA L +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLGFLSER-RGDAGIVYCLSRKKVEEVAEFLGNQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL+++LR Q ++++ +
Sbjct: 255 ALPYHAGLSNELRAHHQKRFLNEE 278
>gi|402587392|gb|EJW81327.1| ATP-dependent DNA helicase, partial [Wuchereria bancrofti]
Length = 396
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPKKNVLKE----VISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F + FNR NL Y + K + E ++ LIK +++GQSGI+YC +RKEC+ + +L
Sbjct: 273 FRAGFNRPNLHYSVCQKPSSDAEFVNILVELIKTRFAGQSGIIYCFSRKECEELTKSLRA 332
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ + A YHA L RN KW++ ++V TV
Sbjct: 333 KGVKASHYHAFLDADKRNITHEKWLNGGINVIVATV 368
>gi|421740480|ref|ZP_16178731.1| ATP-dependent DNA helicase RecQ [Streptomyces sp. SM8]
gi|406691159|gb|EKC94929.1| ATP-dependent DNA helicase RecQ [Streptomyces sp. SM8]
Length = 686
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K++++ +K ++ G +GIVYCL+R + A L +
Sbjct: 263 FVASFDRPNIQYRIVPKNDPKKQLLTFLKEEHPGDAGIVYCLSRNSVERTADFLRDHGVE 322
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 323 AVPYHAGLDARTRATNQSRFL 343
>gi|359146169|ref|ZP_09179800.1| ATP-dependent DNA helicase RecQ [Streptomyces sp. S4]
Length = 693
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K++++ +K ++ G +GIVYCL+R + A L +
Sbjct: 263 FVASFDRPNIQYRIVPKNDPKKQLLTFLKEEHPGDAGIVYCLSRNSVERTADFLRDHGVE 322
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 323 AVPYHAGLDARTRATNQSRFL 343
>gi|291451993|ref|ZP_06591383.1| helicase [Streptomyces albus J1074]
gi|291354942|gb|EFE81844.1| helicase [Streptomyces albus J1074]
Length = 693
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K++++ +K ++ G +GIVYCL+R + A L +
Sbjct: 263 FVASFDRPNIQYRIVPKNDPKKQLLTFLKEEHPGDAGIVYCLSRNSVERTADFLRDHGVE 322
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 323 AVPYHAGLDARTRATNQSRFL 343
>gi|429334930|ref|ZP_19215577.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida CSV86]
gi|428760337|gb|EKX82604.1| ATP-dependent DNA helicase RecQ [Pseudomonas putida CSV86]
Length = 711
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + G +GIVYCL+RK+ D VAA L E
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLGER-RGNAGIVYCLSRKKVDEVAAFLCGEGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R Q ++++ +
Sbjct: 255 ALPYHAGLPAETRAANQRRFLNEE 278
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-R 58
F SFNR NL Y ++ K K+V K++ IK +Y +SGI+YCL++ +C+ ++ L E
Sbjct: 195 FKQSFNRPNLYYHVMKKPKDVSKQMAEFIKKQYPDKSGIIYCLSKYDCEKISGDLNTEYG 254
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I + YHAG+ RN+VQ +W ++ V
Sbjct: 255 IKSAYYHAGMEIHSRNQVQDRWQKGRIKV 283
>gi|453080950|gb|EMF09000.1| ATP-dependent DNA helicase [Mycosphaerella populorum SO2202]
Length = 1518
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ- 56
F SFNR NL YE+ PK K + + +IK + ++GI+YCL+R C+ +A AL +
Sbjct: 819 FTQSFNRENLYYEVRPKPKGKEGISAMADIIKDSHPRETGIIYCLSRANCEDIAKALQKT 878
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
+I A YHAGL ++ VQ +W + ++ V
Sbjct: 879 HKIRAQHYHAGLKGSEKSMVQEEWQAGRIKV 909
>gi|160895590|ref|YP_001561172.1| ATP-dependent DNA helicase RecQ [Delftia acidovorans SPH-1]
gi|333911808|ref|YP_004485540.1| RecQ familyATP-dependent DNA helicase [Delftia sp. Cs1-4]
gi|160361174|gb|ABX32787.1| ATP-dependent DNA helicase RecQ [Delftia acidovorans SPH-1]
gi|333742008|gb|AEF87185.1| ATP-dependent DNA helicase, RecQ family [Delftia sp. Cs1-4]
Length = 677
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I KK+V +++ I+ ++ G++G+VYC +RK + +A L+Q +
Sbjct: 237 FVSSFDRPNIRYRIAEKKDVSNQLLRFIEREHEGEAGVVYCQSRKRVEELAQTLSQAGVP 296
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 297 ALPYHAGLPFETRQLHQDRFL 317
>gi|431795569|ref|YP_007222473.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786334|gb|AGA76463.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 725
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 1 FISSFNRANLKYEILPK--KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SSFNR NL YE+ PK + K +I +K++ G+SGI+YCL+RK+ + +A L
Sbjct: 197 FKSSFNRTNLFYEVRPKAKSDTKKHLIKYVKSQ-KGKSGIIYCLSRKKVEEIAELLKVNG 255
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
INA YHAGL +R + Q +++ +V V
Sbjct: 256 INAAPYHAGLESAMRIKNQDDFLNEEVDV 284
>gi|428310069|ref|YP_007121046.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
gi|428251681|gb|AFZ17640.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
Length = 757
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YE+ PK ++ +++ IK+ SGIVYCL+R+ D VA L ++ I+
Sbjct: 251 IASFNRPNLYYEVQPKERHSYNQLLKKIKSHKG--SGIVYCLSRRAVDEVAFRLQKDGID 308
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG++D+ R Q ++I + V V
Sbjct: 309 ALPYHAGMSDEARATNQTRFIRDDVQV 335
>gi|424775779|ref|ZP_18202769.1| ATP-dependent DNA helicase [Alcaligenes sp. HPC1271]
gi|422888879|gb|EKU31261.1| ATP-dependent DNA helicase [Alcaligenes sp. HPC1271]
Length = 608
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N+ Y I+ K V K+++S I+ ++SG +GIVYCL+R + A L + I+
Sbjct: 196 FVASFDRPNICYRIIEKNEVRKQLLSFIQEEHSGDAGIVYCLSRSRVEDTAEFLCKNGIH 255
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 256 ALPYHAGLDAQQRAINQARFL 276
>gi|256379553|ref|YP_003103213.1| ATP-dependent DNA helicase RecQ [Actinosynnema mirum DSM 43827]
gi|255923856|gb|ACU39367.1| ATP-dependent DNA helicase RecQ [Actinosynnema mirum DSM 43827]
Length = 606
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K+++ L++ +++G SGIVYCL+R + A L I
Sbjct: 197 FVASFDRPNIQYRIVPKNEPKKQLLKLLRDEHAGDSGIVYCLSRNSTEKTAEFLVDNGIA 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 ALPYHAGLDAGTRAANQSRFL 277
>gi|254443570|ref|ZP_05057046.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
gi|198257878|gb|EDY82186.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
Length = 616
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SFNR NL Y I K+ V ++++ +K++ +SGI+YC +RK + A L QE +
Sbjct: 200 YVASFNRPNLAYRIEQKQAVFRQILKFVKSR-PFESGIIYCFSRKATEQTADRLRQEGVE 258
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
AI+YHAG+ R + Q +I ++V V
Sbjct: 259 AIAYHAGMTPLQRAKNQDAFIRDEVKV 285
>gi|126662148|ref|ZP_01733147.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
gi|126625527|gb|EAZ96216.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
Length = 731
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K KN+ ++I IK ++ G+SG++YCL+RK+ + +A L I
Sbjct: 202 FKASFNRPNLYYEVRTKTKNIESDIIRFIK-QHKGKSGVIYCLSRKKVEEIAQVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVEV 288
>gi|311746386|ref|ZP_07720171.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
gi|126575272|gb|EAZ79604.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
Length = 725
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 1 FISSFNRANLKYEILPK-KN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SSFNR NL YE+ PK KN K++I IK + G+SGI+YCL+RK+ + +A L +
Sbjct: 197 FKSSFNRTNLFYEVRPKMKNESKKQLIKFIK-NHKGKSGIIYCLSRKKVEEIAQLLQVNQ 255
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
INA YHAGL +R + Q +++ ++ V
Sbjct: 256 INAAPYHAGLDSAIRIKNQDDFLNEELDV 284
>gi|146298045|ref|YP_001192636.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146152463|gb|ABQ03317.1| ATP-dependent DNA helicase, RecQ family [Flavobacterium johnsoniae
UW101]
Length = 731
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K K++ ++I IK ++ G+SGI+YCL+RK+ +S+A L I
Sbjct: 202 FKASFNRPNLYYEVRTKTKSIESDIIRFIK-QHKGKSGIIYCLSRKKVESIAEVLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|399215939|emb|CCF72627.1| unnamed protein product [Babesia microti strain RI]
Length = 706
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +FNR NLK++++PK K ++E+I ++ +Y SGIVYCL+ ++C+ V++ L +
Sbjct: 361 FSCNFNRPNLKFKVVPKSRNTKLAIEELIGYVR-EYPTSSGIVYCLSCQDCEFVSSELVK 419
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHV 87
IN++ YHA L R VQ W+ ++V
Sbjct: 420 SGINSMHYHAQLDQLTRKHVQQSWMEGSINV 450
>gi|77457695|ref|YP_347200.1| ATP-dependent DNA helicase RecQ [Pseudomonas fluorescens Pf0-1]
gi|398979736|ref|ZP_10688622.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM25]
gi|77381698|gb|ABA73211.1| ATP-dependent DNA helicase [Pseudomonas fluorescens Pf0-1]
gi|398135469|gb|EJM24586.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM25]
Length = 709
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L ++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLTEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|386848022|ref|YP_006266035.1| ATP-dependent DNA helicase RecQ [Actinoplanes sp. SE50/110]
gi|359835526|gb|AEV83967.1| ATP-dependent DNA helicase RecQ [Actinoplanes sp. SE50/110]
Length = 775
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SF+R N++Y I+PK + ++++ L++ ++ G++GIVYCL+R + A L+ +
Sbjct: 203 FTASFDRPNIQYRIVPKNDPKRQLLDLLRTEHPGEAGIVYCLSRASVEKHAEYLSANGVP 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R E Q +++
Sbjct: 263 ALPYHAGLDARTRAEHQSRFL 283
>gi|358638633|dbj|BAL25930.1| ATP-dependent DNA helicase protein [Azoarcus sp. KH32C]
Length = 609
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y ++ K N ++++ I+ + G +GIVYCL+R++ + AA L ++ I
Sbjct: 207 FVSSFDRPNIRYRMVDKDNPRNQLLAFIREDHEGDAGIVYCLSRRKVEETAAWLEEQGIR 266
Query: 61 AISYHAGLADKLRNEVQMKWI 81
++ YHAG+ +R Q +++
Sbjct: 267 SLPYHAGMPQDVRAANQNRFL 287
>gi|440799208|gb|ELR20268.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 608
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 4 SFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
SFNR N+ YE+ K NV ++ S I + +G GI+YC R+ C VA+ L + +N
Sbjct: 180 SFNRPNIYYEVRFKDLLGNVHNDIASFISNR-AGACGIIYCHKRETCGHVASKLKERGVN 238
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL D R VQ KW++ +V +
Sbjct: 239 AEAYHAGLRDADRTAVQTKWMTGEVDI 265
>gi|300868275|ref|ZP_07112904.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
gi|300333710|emb|CBN58088.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
Length = 726
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
++SFNR NL YE+ K K+ E++ +I +G SGI+YCL+RK D +A L Q I+
Sbjct: 211 VASFNRPNLYYEVRAKTKHSFAELLQIIDK--NGGSGIIYCLSRKNVDELAYKLQQVGIS 268
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL D R Q ++I + V +
Sbjct: 269 ALPYHAGLNDSDRTSNQTRFIRDDVQI 295
>gi|167763147|ref|ZP_02435274.1| hypothetical protein BACSTE_01517 [Bacteroides stercoris ATCC
43183]
gi|167698441|gb|EDS15020.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 604
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEI---LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
FISSF+R NL + +K K ++ I A++ G+SGI+YC++R + +SVA L +
Sbjct: 191 FISSFDRPNLSLTVKRGYQQKEKSKTILDFI-ARHPGESGIIYCMSRSKTESVAQMLQKH 249
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I YHAGL+ LR+E Q +I+++V V
Sbjct: 250 GIRTAVYHAGLSPSLRDEAQDDFINDRVQV 279
>gi|327312566|ref|YP_004328003.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
gi|326944958|gb|AEA20843.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
Length = 727
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ KK + +++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRAKKSDDDTDRQIIKFIK-QHAGKSGIIYCLSRKKVEELAAVLQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R+ Q ++ ++ V
Sbjct: 260 DIKAAPYHAGLDSETRSRTQDDFLMEELDV 289
>gi|325855159|ref|ZP_08171782.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
gi|325483896|gb|EGC86840.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
Length = 727
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ KK + +++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRAKKSDDDTDRQIIKFIK-QHAGKSGIIYCLSRKKVEELAAVLQAN 259
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL + R+ Q ++ ++ V
Sbjct: 260 DIKAAPYHAGLDSETRSRTQDDFLMEELDV 289
>gi|442772186|gb|AGC72851.1| ATP-dependent DNA helicase RecQ [uncultured bacterium A1Q1_fos_97]
Length = 607
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FI+SF+R NL E+ P + L+++ I+ K+ Q+GI+Y L+RK + +A L Q+
Sbjct: 197 FIASFDRPNLSLEVRPGQQRLQQIEDFIR-KHPKQAGIIYTLSRKATEDIADKLKQKGFK 255
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A +YHAGL+ R+++Q +I++ +H+ TV
Sbjct: 256 AEAYHAGLSPDRRSKIQDHFINDNLHIICATV 287
>gi|50955687|ref|YP_062975.1| ATP-dependent DNA helicase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50952169|gb|AAT89870.1| ATP-dependent DNA helicase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 631
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+S F+R N++Y I+PK V K+++ I ++ G++GIVY L+R + A LA +
Sbjct: 224 FVSDFDRPNIQYRIVPKAEVRKQLLDFISGEHPGEAGIVYALSRNSVERTAEFLAGRGLT 283
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R Q +++
Sbjct: 284 ALPYHAGLDAQTRARTQARFL 304
>gi|389737283|ref|ZP_10190741.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 115]
gi|388436519|gb|EIL93382.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 115]
Length = 604
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N+ Y ++ K N +++ I+ ++ G++GIVYCL+RK+ D AA LA+ I
Sbjct: 196 FISSFDRPNIGYRVMLKHNPRTQLMRFIE-EHRGEAGIVYCLSRKKVDDTAAWLAEAGIE 254
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 255 ALPYHAGLDAATRARHQQRFL 275
>gi|328545859|ref|YP_004305968.1| atp-dependent dna helicase [Polymorphum gilvum SL003B-26A1]
gi|326415599|gb|ADZ72662.1| Probable atp-dependent dna helicase protein [Polymorphum gilvum
SL003B-26A1]
Length = 620
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SF+R N++YEI+ + N ++++ + A++ G+SGIVYCL+R + D +A L ++ I
Sbjct: 211 FTTSFDRPNIRYEIVERANQRQQLLDFL-ARHKGESGIVYCLSRAKVDDIAGWLTEKGIR 269
Query: 61 AISYHAGLADKLRNEVQ 77
A+ YHAGL + R Q
Sbjct: 270 ALPYHAGLERETREANQ 286
>gi|329938318|ref|ZP_08287769.1| helicase [Streptomyces griseoaurantiacus M045]
gi|329302807|gb|EGG46697.1| helicase [Streptomyces griseoaurantiacus M045]
Length = 638
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK K+++S ++ +++G +GIVYCL+R + A L+ +
Sbjct: 215 FVASFDRPNIQYRIVPKAEPKKQLLSFLREEHAGDAGIVYCLSRNSVERTAEFLSANGVE 274
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 275 AVPYHAGLDAGTRAAHQARFL 295
>gi|399001574|ref|ZP_10704286.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM18]
gi|398127125|gb|EJM16539.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM18]
Length = 708
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAVFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R Q ++++ +
Sbjct: 255 ALPYHAGLPNETRAHHQKRFLNEE 278
>gi|398997856|ref|ZP_10700661.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM21]
gi|398122812|gb|EJM12396.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM21]
Length = 708
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAVFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL ++ R Q ++++ +
Sbjct: 255 ALPYHAGLPNETRAHHQKRFLNEE 278
>gi|224095634|ref|XP_002200254.1| PREDICTED: ATP-dependent DNA helicase Q1 [Taeniopygia guttata]
Length = 661
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ I +Y G SGIVYC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRHKPSNNEDFIEDIVKTINGRYKGMSGIVYCFSQKDSEQVTVSLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + K + +V W +N++ V TV
Sbjct: 337 LGIKAGTYHANMDAKYKTKVHKGWATNQIQVVVATV 372
>gi|375014002|ref|YP_004990990.1| ATP-dependent DNA helicase RecQ [Owenweeksia hongkongensis DSM
17368]
gi|359349926|gb|AEV34345.1| ATP-dependent DNA helicase RecQ [Owenweeksia hongkongensis DSM
17368]
Length = 731
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK ++V +++I IK + G+SGI+YCL+RK+ + +A L I
Sbjct: 200 FKASFNRPNLYYEVRPKTEHVDRDIIKFIKG-HMGKSGIIYCLSRKKVEELAETLQVNGI 258
Query: 60 NAISYHAGLADKLR 73
NA+ YHAGL K R
Sbjct: 259 NALPYHAGLDAKSR 272
>gi|150004558|ref|YP_001299302.1| ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294776076|ref|ZP_06741571.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|423312434|ref|ZP_17290371.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149932982|gb|ABR39680.1| putative ATP-dependent DNA helicase [Bacteroides vulgatus ATCC
8482]
gi|294450068|gb|EFG18573.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|392688918|gb|EIY82202.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 605
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 1 FISSFNRANLKYEI---LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
FISSF+R NL E+ +K+ ++ ++ I+ K+ + GI+YC++R + ++VAA L ++
Sbjct: 191 FISSFDRPNLSLEVKRGYQQKDKMRTILEFIE-KHKNECGIIYCMSRSKTENVAAMLMKQ 249
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A YHAGL+ +R++ Q +I+++V V T+
Sbjct: 250 GIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATI 284
>gi|294495880|ref|YP_003542373.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
gi|292666879|gb|ADE36728.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
Length = 599
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+++SFNR+NL YE+ +N +++ S +++ + GI+YC TRK + +A L + +N
Sbjct: 192 YVASFNRSNLYYEVKSGENADQQITSYLRS-HPESCGIIYCQTRKSVEGLAGRLKKLGVN 250
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A YHAG++D+LR+ Q K++ + V TV
Sbjct: 251 AAFYHAGMSDELRHRAQEKFLDGTIRVVVATV 282
>gi|257057272|ref|YP_003135104.1| ATP-dependent DNA helicase RecQ [Saccharomonospora viridis DSM
43017]
gi|256587144|gb|ACU98277.1| ATP-dependent DNA helicase RecQ [Saccharomonospora viridis DSM
43017]
Length = 607
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+PKK+ ++++ ++ ++ +GIVYCL+R+ + A L + I
Sbjct: 197 FVSSFDRPNIQYRIVPKKDPRRQLLDFLRTEHPHDAGIVYCLSRRSVEETAEFLTRNGIE 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 257 ALPYHAGLDSATRIRHQARFL 277
>gi|300784908|ref|YP_003765199.1| ATP-dependent DNA helicase RecQ [Amycolatopsis mediterranei U32]
gi|384148184|ref|YP_005531000.1| ATP-dependent DNA helicase RecQ [Amycolatopsis mediterranei S699]
gi|399536791|ref|YP_006549453.1| ATP-dependent DNA helicase RecQ [Amycolatopsis mediterranei S699]
gi|299794422|gb|ADJ44797.1| ATP-dependent DNA helicase RecQ [Amycolatopsis mediterranei U32]
gi|340526338|gb|AEK41543.1| ATP-dependent DNA helicase RecQ [Amycolatopsis mediterranei S699]
gi|398317561|gb|AFO76508.1| ATP-dependent DNA helicase RecQ [Amycolatopsis mediterranei S699]
Length = 612
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K + ++++ L++ +++G +GIVYCL+R + A L Q I
Sbjct: 203 FVASFDRPNIQYRIVGKNSPQRQLLELLRTEHAGDAGIVYCLSRNSVEKTAEFLVQNGIP 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R + Q +++
Sbjct: 263 AVPYHAGLDARTRAKHQSRFL 283
>gi|33598088|ref|NP_885731.1| ATP-dependent DNA helicase [Bordetella parapertussis 12822]
gi|33566646|emb|CAE38856.1| ATP-dependent DNA helicase [Bordetella parapertussis]
Length = 606
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V ++++ LI++++ G+SG+VY L+R + A L +N
Sbjct: 197 FVASFDRPNIRYRIVEKNEVRRQLLDLIRSEHEGESGVVYGLSRARVEETADFLCANGVN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R Q +++
Sbjct: 257 ALPYHAGLSPAVRAANQARFL 277
>gi|365987708|ref|XP_003670685.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
gi|343769456|emb|CCD25442.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
Length = 1110
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+L K K+ + E+I IK ++ QSGI+YC ++ C+ VA L +I
Sbjct: 665 SFNRTNLFYEVLRKDKDSIDEMIDAIKYHFTEQSGIIYCHSKNSCEKVALQLQNNQIRCG 724
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R +Q W NK+ V
Sbjct: 725 YYHAGMDPDERMMIQRDWQRNKLQV 749
>gi|340618927|ref|YP_004737380.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
gi|339733724|emb|CAZ97101.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
Length = 736
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 3 SSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
+SFNR NL YE+ PK NV ++I +K K +G+SGI+YCL+RK + +A L ++A
Sbjct: 210 ASFNRPNLFYEVRPKTANVDSDIIRFVK-KNAGKSGIIYCLSRKRVEELAQVLQVNGVSA 268
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAG K R++ Q ++ V V
Sbjct: 269 VPYHAGFDAKTRSKYQDMFLMEDVDV 294
>gi|193212332|ref|YP_001998285.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
gi|193085809|gb|ACF11085.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
Length = 609
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
+SF+R NL YE+ K+ +++SL+ ++SGQSGI+Y +RK + AA L + I A+
Sbjct: 206 ASFDRPNLTYEVRFKEAGESQLVSLLN-EFSGQSGIIYRTSRKSVNDTAAMLQKRGIRAL 264
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAGLAD+ R++ Q +I ++V V
Sbjct: 265 PYHAGLADRERHDNQEAFIRDEVDV 289
>gi|319643550|ref|ZP_07998171.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
gi|345518434|ref|ZP_08797885.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|254835825|gb|EET16134.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|317384814|gb|EFV65772.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
Length = 605
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 1 FISSFNRANLKYEI---LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
FISSF+R NL E+ +K+ ++ ++ I+ K+ + GI+YC++R + ++VAA L ++
Sbjct: 191 FISSFDRPNLSLEVKRGYQQKDKMRTILEFIE-KHKNECGIIYCMSRSKTENVAAMLMKQ 249
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A YHAGL+ +R++ Q +I+++V V T+
Sbjct: 250 GIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATI 284
>gi|456389575|gb|EMF55015.1| helicase [Streptomyces bottropensis ATCC 25435]
Length = 681
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F +SF+R N++Y I+PK + K+++S ++ ++ G +GIVYCL+R D A L++ +
Sbjct: 206 FEASFDRPNIQYRIVPKADPKKQLLSFLRQEHPGDAGIVYCLSRNSVDRTAEFLSKNGVE 265
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 266 AVPYHAGLDAGTRAAHQSRFL 286
>gi|346225175|ref|ZP_08846317.1| putative ATP-dependent DNA helicase [Anaerophaga thermohalophila
DSM 12881]
Length = 726
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YEI PK N +++I ++K G+S I+YCL+RK+ + +A L I
Sbjct: 201 FKSSFNRPNLFYEIRPKVNATRDIIKVLKEN-PGKSVIIYCLSRKKVEELAETLVVNGIK 259
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAG+ R+ Q K++ + V
Sbjct: 260 ALPYHAGMDAATRSGNQDKFLMEDIDV 286
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALA-QER 58
F SFNR NL Y+I K KN+++ + LI++ + G++GIVY L+RK +++A L Q
Sbjct: 1039 FSQSFNRPNLFYDIRTKGKNIVQTIADLIQSDHEGETGIVYTLSRKSAETIAKKLRDQSG 1098
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A YHA + + + +VQ KW S ++ V
Sbjct: 1099 ISAHHYHAKMETEEKTDVQRKWQSGQIKV 1127
>gi|394988714|ref|ZP_10381549.1| ATP-dependent DNA helicase RecQ [Sulfuricella denitrificans skB26]
gi|393792093|dbj|GAB71188.1| ATP-dependent DNA helicase RecQ [Sulfuricella denitrificans skB26]
Length = 616
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y + K N ++ + ++ +++ +GIVYCL+RK+ D AA L ++ +
Sbjct: 201 FVSSFDRPNIRYRVALKANARNQLQAFLETEHANDAGIVYCLSRKKVDETAAWLKEKGWD 260
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL RN Q +++
Sbjct: 261 ALPYHAGLDAATRNANQRRFL 281
>gi|340621987|ref|YP_004740439.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
gi|339902253|gb|AEK23332.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
Length = 729
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK KNV ++I +K ++S +SGI+YCL+RK+ + ++ L I
Sbjct: 203 FKASFNRPNLYYEVRPKTKNVDADIIRFVK-QHSKKSGIIYCLSRKKVEELSQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL K R + Q ++ +V V
Sbjct: 262 TAVPYHAGLDAKTRAKHQDMFLMEEVDV 289
>gi|316936302|ref|YP_004111284.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris DX-1]
gi|315604016|gb|ADU46551.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris DX-1]
Length = 617
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I+ K+N ++ + I ++ G SG+VYCL+R + + +A L++ +
Sbjct: 208 FVSSFDRPNIRYSIVDKQNAPAQLKAFIDDRHRGHSGVVYCLSRAKVEDIAETLSKSGLT 267
Query: 61 AISYHAGLADKLRNEVQMKWIS 82
A+ YHAGL R Q ++++
Sbjct: 268 ALPYHAGLPPDARARNQDRFLN 289
>gi|85858064|ref|YP_460266.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
gi|85721155|gb|ABC76098.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
Length = 619
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+IS F+R N++Y +L K+ ++ + ++ +Y G +GIVYCL+R+ + VA AL +
Sbjct: 196 YISGFDRPNIRYTVLEKRKPFAQLTTFLQPRYKG-TGIVYCLSRQRVEKVAGALTEAGFQ 254
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R +VQ ++ + + +
Sbjct: 255 AAPYHAGLPAGARKQVQEDFLRDDIRI 281
>gi|410421472|ref|YP_006901921.1| ATP-dependent DNA helicase [Bordetella bronchiseptica MO149]
gi|427825486|ref|ZP_18992548.1| ATP-dependent DNA helicase [Bordetella bronchiseptica Bbr77]
gi|408448767|emb|CCJ60452.1| ATP-dependent DNA helicase [Bordetella bronchiseptica MO149]
gi|410590751|emb|CCN05844.1| ATP-dependent DNA helicase [Bordetella bronchiseptica Bbr77]
Length = 606
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V ++++ LI++++ G+SG+VY L+R + A L +N
Sbjct: 197 FVASFDRPNIRYRIVEKNEVRRQLLDLIRSEHEGESGVVYGLSRARVEETADFLCANGVN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R Q +++
Sbjct: 257 ALPYHAGLSPAVRAANQARFL 277
>gi|410471816|ref|YP_006895097.1| ATP-dependent DNA helicase [Bordetella parapertussis Bpp5]
gi|408441926|emb|CCJ48426.1| putative ATP-dependent DNA helicase [Bordetella parapertussis Bpp5]
Length = 606
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V ++++ LI++++ G+SG+VY L+R + A L +N
Sbjct: 197 FVASFDRPNIRYRIVEKNEVRRQLLDLIRSEHEGESGVVYGLSRARVEETADFLCANGVN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R Q +++
Sbjct: 257 ALPYHAGLSPAVRAANQARFL 277
>gi|33602981|ref|NP_890541.1| ATP-dependent DNA helicase [Bordetella bronchiseptica RB50]
gi|412341675|ref|YP_006970430.1| ATP-dependent DNA helicase [Bordetella bronchiseptica 253]
gi|33568612|emb|CAE34370.1| ATP-dependent DNA helicase [Bordetella bronchiseptica RB50]
gi|408771509|emb|CCJ56310.1| ATP-dependent DNA helicase [Bordetella bronchiseptica 253]
Length = 606
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V ++++ LI++++ G+SG+VY L+R + A L +N
Sbjct: 197 FVASFDRPNIRYRIVEKNEVRRQLLDLIRSEHEGESGVVYGLSRARVEETADFLCANGVN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R Q +++
Sbjct: 257 ALPYHAGLSPAVRAANQARFL 277
>gi|222109326|ref|YP_002551590.1| ATP-dependent DNA helicase recq [Acidovorax ebreus TPSY]
gi|221728770|gb|ACM31590.1| ATP-dependent DNA helicase RecQ [Acidovorax ebreus TPSY]
Length = 623
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N++Y I KK L +++ I ++ G++G+VYC +RK + +A AL +
Sbjct: 203 FVSSFDRPNIRYRIEEKKEPLTQLMRFIDREHLGEAGVVYCQSRKRVEELAQALCDAGLT 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R + Q +++
Sbjct: 263 ALPYHAGLPAEVRQQNQDRFL 283
>gi|398016123|ref|XP_003861250.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Leishmania
donovani]
gi|322499475|emb|CBZ34548.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Leishmania
donovani]
Length = 1946
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 1 FISSFNRANLKYEI--LPKKNVLKEVISLIKAKYSGQS-GIVYCLTRKECDSVAAALAQE 57
F SFNRANLKY + + K V+ V L+ ++S S GIVYCL+RK+C+ +AAAL +
Sbjct: 711 FKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRR 770
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YH+ A K NE Q +W +++ V
Sbjct: 771 GIKASYYHSEAASK--NERQERWTRDELQV 798
>gi|401422966|ref|XP_003875970.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492210|emb|CBZ27484.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1687
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 1 FISSFNRANLKYEI--LPKKNVLKEVISLIKAKYSGQS-GIVYCLTRKECDSVAAALAQE 57
F SFNRANLKY + + K V+ V L+ ++S S GIVYCL+RK+C+ +AAAL +
Sbjct: 460 FKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRR 519
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YH+ A K NE Q +W +++ V
Sbjct: 520 GIKASYYHSEAASK--NERQERWTRDELQV 547
>gi|146088064|ref|XP_001465982.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
infantum JPCM5]
gi|134070083|emb|CAM68416.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania
infantum JPCM5]
Length = 1946
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 1 FISSFNRANLKYEI--LPKKNVLKEVISLIKAKYSGQS-GIVYCLTRKECDSVAAALAQE 57
F SFNRANLKY + + K V+ V L+ ++S S GIVYCL+RK+C+ +AAAL +
Sbjct: 711 FKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRR 770
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YH+ A K NE Q +W +++ V
Sbjct: 771 GIKASYYHSEAASK--NERQERWTRDELQV 798
>gi|157870239|ref|XP_001683670.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania major
strain Friedlin]
gi|68126736|emb|CAJ05096.1| putative ATP-dependent DEAD/H DNA helicase recQ [Leishmania major
strain Friedlin]
Length = 1691
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 1 FISSFNRANLKYEI--LPKKNVLKEVISLIKAKYSGQS-GIVYCLTRKECDSVAAALAQE 57
F SFNRANLKY + + K V+ V L+ ++S S GIVYCL+RK+C+ +AAAL +
Sbjct: 457 FKGSFNRANLKYSVQHVRGKQVIPVVEDLVLHRFSPSSCGIVYCLSRKDCEEMAAALVRR 516
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YH+ A K NE Q +W +++ V
Sbjct: 517 GIKASYYHSEAASK--NERQERWTRDELQV 544
>gi|305664748|ref|YP_003861035.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
gi|88707870|gb|EAR00109.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
Length = 736
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNRANL YE+ K NV ++I +K SG+SGIVYCL+RK + +A L +
Sbjct: 208 FKASFNRANLFYEVRTKTANVDSDIIRFVKQN-SGKSGIVYCLSRKRVEELAQVLQVNGV 266
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAG K R++ Q ++ V V
Sbjct: 267 SAVPYHAGFDAKTRSKYQDMFLMEDVDV 294
>gi|410931808|ref|XP_003979287.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Takifugu
rubripes]
Length = 610
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 3 SSFNRANLKYEILPKK----NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
+SFNR NL YE+ K ++++ SLIK+KY QSGIVY ++K+ +SV++AL +
Sbjct: 290 ASFNRTNLYYEVRVKNCDSDASVEDMASLIKSKYQHQSGIVYVFSQKDAESVSSALQKRG 349
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + ++ V +W +NK+ V
Sbjct: 350 ILASPYHANMDPTDKSHVHRRWSTNKIQV 378
>gi|355336772|gb|AER57871.1| ATP-dependent DNA helicase RecQ family protein [Acytostelium
subglobosum]
Length = 1147
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SFNR NL+Y ++ K K ++ ++ I Y G+SGIVYC++R +C +VA+ L ++ +
Sbjct: 676 FKQSFNRPNLQYAVVKKSKKIVDDIAEFINKFYPGKSGIVYCISRNDCVTVASELRKKGL 735
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHA + R Q W +++ +
Sbjct: 736 RANFYHANMEPDERQRTQESWTRDRIKI 763
>gi|320040058|gb|EFW21992.1| RecQ helicase MUSN [Coccidioides posadasii str. Silveira]
Length = 1569
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K N VL+ + +I Y G++GI+YCL+RK C+ VA L +
Sbjct: 901 FTQSFNRPNLTYEVRVKGNHEDVLENIAKIIDFHY-GKTGIIYCLSRKNCEKVAKDLCTK 959
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAG+A R VQ +W K +V
Sbjct: 960 YHVKATHYHAGMAPDDRIRVQREWQDGKHNV 990
>gi|33594305|ref|NP_881949.1| ATP-dependent DNA helicase [Bordetella pertussis Tohama I]
gi|384205602|ref|YP_005591341.1| ATP-dependent DNA helicase [Bordetella pertussis CS]
gi|408417384|ref|YP_006628091.1| ATP-dependent DNA helicase [Bordetella pertussis 18323]
gi|33564380|emb|CAE43685.1| ATP-dependent DNA helicase [Bordetella pertussis Tohama I]
gi|332383716|gb|AEE68563.1| ATP-dependent DNA helicase [Bordetella pertussis CS]
gi|401779554|emb|CCJ65092.1| ATP-dependent DNA helicase [Bordetella pertussis 18323]
Length = 606
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V ++++ LI++++ G+SG+VY L+R + A L +N
Sbjct: 197 FVASFDRPNIRYRIVEKNEVRRQLLDLIRSEHEGESGVVYGLSRARVEETADFLCANGVN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R Q +++
Sbjct: 257 ALPYHAGLSPAVRAANQARFL 277
>gi|427815996|ref|ZP_18983060.1| ATP-dependent DNA helicase [Bordetella bronchiseptica 1289]
gi|410566996|emb|CCN24566.1| ATP-dependent DNA helicase [Bordetella bronchiseptica 1289]
Length = 606
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K V ++++ LI++++ G+SG+VY L+R + A L +N
Sbjct: 197 FVASFDRPNIRYRIVEKNEVRRQLLDLIRSEHEGESGVVYGLSRARVEETADFLCANGVN 256
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL+ +R Q +++
Sbjct: 257 ALPYHAGLSPAVRAANQARFL 277
>gi|325268722|ref|ZP_08135351.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
gi|324988966|gb|EGC20920.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
Length = 727
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SSFNR NL YE+ KK + +++I IK +++G+SGI+YCL+RK+ + +AA L
Sbjct: 201 FKSSFNRPNLYYEVRAKKSDDDTDRQIIKFIK-QHAGKSGIIYCLSRKKVEELAAVLQAN 259
Query: 58 RINAISYHAGLADKLRNEVQ 77
I A YHAGL + R++ Q
Sbjct: 260 DIKAAPYHAGLDSETRSKTQ 279
>gi|421615254|ref|ZP_16056286.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica SH28]
gi|408494014|gb|EKJ98640.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica SH28]
Length = 745
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ F+R NL Y +L L ++ I A++ G+SG+VYC+TRKE + AAAL +
Sbjct: 215 LVGDFDRPNLTYRMLRADGKLNQIQQCI-AQHPGESGVVYCITRKEVEQTAAALESMGVR 273
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL D++R Q +I KV V
Sbjct: 274 TLPYHAGLPDEVRQANQEAFIQEKVDV 300
>gi|390943602|ref|YP_006407363.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390417030|gb|AFL84608.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 725
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 1 FISSFNRANLKYEILPK-KN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SSFNR NL YE+ PK KN K++I IK + G+SGI+YCL+RK+ + +A+ L
Sbjct: 197 FKSSFNRTNLYYEVRPKIKNETKKQIIKYIKGQ-KGKSGIIYCLSRKKVEEIASLLKVNG 255
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
INA YHAGL +R + Q +++ ++ V
Sbjct: 256 INAAPYHAGLDQNVRIKNQDDFLNEELDV 284
>gi|321254103|ref|XP_003192966.1| ATP-dependent DNA helicase hus2/rqh1 [Cryptococcus gattii WM276]
gi|317459435|gb|ADV21179.1| ATP-dependent DNA helicase hus2/rqh1, putative [Cryptococcus gattii
WM276]
Length = 1051
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 4 SFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER-INA 61
SFNR NL YE+ PK + V++E+++ ++ + + SGIVYC +R C+++A L +E + A
Sbjct: 437 SFNRPNLHYEVRPKTSAVIQEIVAFVRTQEARASGIVYCNSRDNCENLAKKLREEHGLRA 496
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHVGHWTVVS 94
YHAG+ + R ++Q W +K + T +S
Sbjct: 497 YHYHAGMTKENRRKMQEGWQDHKFEIMVATTLS 529
>gi|440712393|ref|ZP_20893014.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Rhodopirellula baltica SWK14]
gi|436442914|gb|ELP36007.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Rhodopirellula baltica SWK14]
Length = 745
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ F+R NL Y +L L ++ I A++ G+SG+VYC+TRKE + AAAL +
Sbjct: 215 LVGDFDRPNLTYRMLRADGKLNQIQQCI-AQHPGESGVVYCITRKEVEQTAAALESMGVR 273
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL D++R Q +I KV V
Sbjct: 274 TLPYHAGLPDEVRQANQEAFIQEKVDV 300
>gi|402307191|ref|ZP_10826218.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
gi|400379031|gb|EJP31880.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
Length = 740
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YE+ K ++ +++ +K +++G+SGI+YCL+RK+ + +AA L I
Sbjct: 214 FKSSFNRSNLYYEVRQKSADIDTQIVKFVK-QHAGKSGIIYCLSRKKVEELAAVLKVNEI 272
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 273 KAAPYHAGLDSATRSQTQDDFLMERIDV 300
>gi|372209002|ref|ZP_09496804.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium S85]
Length = 734
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ PK K+V ++I I+ + G+SG++YCL+RK+ + +A L I
Sbjct: 202 FKASFNRPNLFYEVRPKTKDVTSDIIRFIRQRL-GKSGVIYCLSRKKVEEIAQTLQVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ V V
Sbjct: 261 SALPYHAGLDAKTRAKHQDMFLMEDVDV 288
>gi|332882718|ref|ZP_08450329.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332679220|gb|EGJ52206.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 729
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK KNV ++I +K + + +SGI+YCL+RK+ + +A L I
Sbjct: 203 FKSSFNRPNLYYEVRPKTKNVDADIIRFVK-QNTKKSGIIYCLSRKKVEDLAQTLQVNGI 261
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 262 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 289
>gi|417300406|ref|ZP_12087617.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica WH47]
gi|327543280|gb|EGF29713.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica WH47]
Length = 745
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
+ F+R NL Y +L L ++ I A++ G+SG+VYC+TRKE + AAAL +
Sbjct: 215 LVGDFDRPNLTYRMLRADGKLNQIQQCI-AQHPGESGVVYCITRKEVEQTAAALESMGVR 273
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
+ YHAGL D++R Q +I KV V
Sbjct: 274 TLPYHAGLPDEVRQANQEAFIQEKVDV 300
>gi|315607430|ref|ZP_07882426.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
gi|315250862|gb|EFU30855.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
Length = 740
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YE+ K ++ +++ +K +++G+SGI+YCL+RK+ + +AA L I
Sbjct: 214 FKSSFNRSNLYYEVRQKSADIDTQIVKFVK-QHAGKSGIIYCLSRKKVEELAAVLKVNEI 272
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 273 KAAPYHAGLDSATRSQTQDDFLMERIDV 300
>gi|288924568|ref|ZP_06418505.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
gi|288338355|gb|EFC76704.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
Length = 740
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR+NL YE+ K ++ +++ +K +++G+SGI+YCL+RK+ + +AA L I
Sbjct: 214 FKSSFNRSNLYYEVRQKSADIDTQIVKFVK-QHAGKSGIIYCLSRKKVEELAAVLKVNEI 272
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 273 KAAPYHAGLDSATRSQTQDDFLMERIDV 300
>gi|346322515|gb|EGX92114.1| RecQ family helicase MusN [Cordyceps militaris CM01]
Length = 1700
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKKNV---LKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK ++ + LI + Y+G +GIVY L+RK ++VA L +
Sbjct: 1009 FSQSFNRPNLFYEVRPKGTAASSIETIADLIHSHYAGLTGIVYALSRKGTENVAKKLGEA 1068
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I+A YHAG+ + VQ KW V V
Sbjct: 1069 GISAYHYHAGMTPPEKVSVQKKWQKGDVKV 1098
>gi|265751367|ref|ZP_06087430.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|345514773|ref|ZP_08794279.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|423228784|ref|ZP_17215190.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423247595|ref|ZP_17228644.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|229437610|gb|EEO47687.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|263238263|gb|EEZ23713.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|392631925|gb|EIY25892.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392635523|gb|EIY29422.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
Length = 605
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 1 FISSFNRANLKYEI---LPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
FISSF+R NL E+ +K+ + ++ I+ K+ + GI+YC++R + +SVAA L ++
Sbjct: 191 FISSFDRPNLSLEVKRGYQQKDKARTILEFIE-KHKNECGIIYCMSRSKTESVAAMLMKQ 249
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A YHAGL+ +R++ Q +I+++V V T+
Sbjct: 250 GIRATVYHAGLSSDMRDKAQNDFINDRVQVVCATI 284
>gi|372489702|ref|YP_005029267.1| ATP-dependent DNA helicase RecQ [Dechlorosoma suillum PS]
gi|359356255|gb|AEV27426.1| ATP-dependent DNA helicase RecQ [Dechlorosoma suillum PS]
Length = 612
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+ K N K++++ + A + G++GIVYCL+RK+ + AA L + I
Sbjct: 204 FVASFDRPNIRYLIVEKDNPRKQLLAFL-ANHKGEAGIVYCLSRKKVEETAAWLTSQGIP 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R + Q ++
Sbjct: 263 ALPYHAGLPAEVRADNQRTFL 283
>gi|119193364|ref|XP_001247288.1| hypothetical protein CIMG_01059 [Coccidioides immitis RS]
gi|392863466|gb|EAS35781.2| RecQ family ATP-dependent DNA helicase [Coccidioides immitis RS]
Length = 1569
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K N VL+ + +I Y G++GI+YCL+RK C+ VA L +
Sbjct: 901 FTQSFNRPNLTYEVRVKGNHEDVLENIAKIIDFHY-GKTGIIYCLSRKNCEKVAKDLCTK 959
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAG+A R VQ +W K +V
Sbjct: 960 YHVKATHYHAGMAPDDRIRVQREWQDGKHNV 990
>gi|395771887|ref|ZP_10452402.1| helicase [Streptomyces acidiscabies 84-104]
Length = 677
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K++++ ++ +++G +GIVYCL+R + A L I
Sbjct: 214 FVASFDRPNIQYRIVPKADPKKQLLAFLREEHAGDAGIVYCLSRNSVEKTAEFLVNNGIA 273
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 274 AVPYHAGLDAGTRARHQSRFL 294
>gi|365961574|ref|YP_004943141.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
gi|365738255|gb|AEW87348.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
Length = 731
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YE+ K KNV ++I IK ++ G+SG++YCL+RK+ + +A L I
Sbjct: 202 FKASFNRPNLFYEVRTKTKNVEADIIRFIK-QHKGKSGVIYCLSRKKVEEIAEVLKVNGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
+A+ YHAGL K R + Q ++ +V V
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEEVDV 288
>gi|303312131|ref|XP_003066077.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105739|gb|EER23932.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1310
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 1 FISSFNRANLKYEILPKKN---VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ K N VL+ + +I Y G++GI+YCL+RK C+ VA L +
Sbjct: 642 FTQSFNRPNLTYEVRVKGNHEDVLENIAKIIDFHY-GKTGIIYCLSRKNCEKVAKDLCTK 700
Query: 58 -RINAISYHAGLADKLRNEVQMKWISNKVHV 87
+ A YHAG+A R VQ +W K +V
Sbjct: 701 YHVKATHYHAGMAPDDRIRVQREWQDGKHNV 731
>gi|408530006|emb|CCK28180.1| ATP-dependent DNA helicase recQ [Streptomyces davawensis JCM 4913]
Length = 655
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I+PK + K+++ ++ +++G +GIVYCL+R + A L++ +
Sbjct: 211 FVASFDRPNIQYRIVPKADPKKQLLGFLREEHAGDAGIVYCLSRNSVEKTAEFLSRNGVE 270
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL R Q +++
Sbjct: 271 AVPYHAGLDAGTRAAHQSRFL 291
>gi|385301828|gb|EIF45990.1| atp-dependent helicase [Dekkera bruxellensis AWRI1499]
Length = 358
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL Y ++PKK N ++ + LI KY+ +GI+YC ++ C+ + L I
Sbjct: 135 SFNRTNLYYGVVPKKKNTVQRIAELINKKYTNYTGIIYCHSKNSCEHTSEKLCAFGIKCD 194
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG++ + R+ VQM W +++ V
Sbjct: 195 FYHAGMSTEDRSRVQMAWQHDQIKV 219
>gi|374597031|ref|ZP_09670035.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
gi|373871670|gb|EHQ03668.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
Length = 732
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 1 FISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F +SFNR NL YEI PK KNV ++I +K + G+SGI+YCL+RK + +A L I
Sbjct: 203 FKASFNRPNLYYEIRPKTKNVDADIIRFVK-QNEGKSGIIYCLSRKRVEELAQTLQVNGI 261
Query: 60 NAISYHAGLADKLR 73
A+ YHAGL K R
Sbjct: 262 KAVPYHAGLDPKTR 275
>gi|302890734|ref|XP_003044250.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
gi|256725172|gb|EEU38537.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
Length = 1302
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPK---KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ PK + + SLI+ +Y QSGIVY ++RK + VA +L ++
Sbjct: 896 FSQSFNRPNLYYEVRPKTTNNKTIDSIASLIRLQYRNQSGIVYTISRKNAEKVAESLTKQ 955
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + + EVQ W +V V
Sbjct: 956 GIMARHYHAHVDPREKVEVQDGWQRGQVKV 985
>gi|78486335|ref|YP_392260.1| ATP-dependent DNA helicase RecQ [Thiomicrospira crunogena XCL-2]
gi|78364621|gb|ABB42586.1| ATP-dependent DNA helicase RecQ [Thiomicrospira crunogena XCL-2]
Length = 629
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 2 ISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQ-SGIVYCLTRKECDSVAAALAQERIN 60
+SSF+R N++Y + K+ +K+++S + A+ Q SGIVYCL+RK + VA L +
Sbjct: 226 VSSFDRPNIRYTVFEKRQPMKQLLSFLDARPGHQESGIVYCLSRKRVEEVALQLQDKGYR 285
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A +YHAGL +R V ++I +++ +
Sbjct: 286 AKAYHAGLPGDIRQTVHQQFIRDEIDI 312
>gi|410029263|ref|ZP_11279099.1| ATP-dependent DNA helicase RecQ [Marinilabilia sp. AK2]
Length = 726
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 1 FISSFNRANLKYEILPK-KN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SSFNR NL YEI PK KN K++I IK++ G+SGI+YCL+RK+ + +A L
Sbjct: 197 FKSSFNRTNLYYEIRPKLKNETKKQIIKYIKSQ-KGKSGIIYCLSRKKVEEIAELLKVNG 255
Query: 59 INAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHAGL +R + Q +++ +V V
Sbjct: 256 IKAAPYHAGLDQSVRIKNQDDFLNEEVDV 284
>gi|323343308|ref|ZP_08083535.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
gi|323095127|gb|EFZ37701.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
Length = 725
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKKN-VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ K N + ++VI IK ++ +SGI+YCL+RK+ + +AA L I
Sbjct: 201 FKSSFNRPNLYYEVRQKSNDIDRQVIKFIK-QHPCKSGIIYCLSRKKVEELAAILLANEI 259
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
A YHAGL R++ Q ++ ++ V
Sbjct: 260 KAAPYHAGLDSATRSQTQDDFLMERIDV 287
>gi|19114004|ref|NP_593092.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe 972h-]
gi|1175484|sp|Q09811.1|HUS2_SCHPO RecName: Full=ATP-dependent DNA helicase hus2/rqh1
gi|1019410|emb|CAA91177.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe]
gi|1684754|emb|CAA70577.1| DNA-helicase [Schizosaccharomyces pombe]
Length = 1328
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 3 SSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE-RINA 61
SSFNR NL YEI PKK++ E+ I + +SGI+YCL+R C+ VAA L + + A
Sbjct: 711 SSFNRPNLFYEIKPKKDLYTELYRFISNGHLHESGIIYCLSRTSCEQVAAKLRNDYGLKA 770
Query: 62 ISYHAGLADKLRNEVQMKWIS 82
YHAGL R +Q +W S
Sbjct: 771 WHYHAGLEKVERQRIQNEWQS 791
>gi|427717685|ref|YP_007065679.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
gi|427350121|gb|AFY32845.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
Length = 720
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 ISSFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
I+SFNR NL YEI K K E++ LI+ + S IVYCLTRK+ D + L +++
Sbjct: 203 IASFNRQNLYYEIRSKTKYAYAELLELIRE--TEGSAIVYCLTRKKVDELTFKLQNDKVA 260
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
A+ YHAGL+D+ R++ Q ++I + V V T+
Sbjct: 261 ALPYHAGLSDEERSKNQTRFIRDDVRVMVATI 292
>gi|354482050|ref|XP_003503213.1| PREDICTED: ATP-dependent DNA helicase Q1 [Cricetulus griseus]
gi|344244467|gb|EGW00571.1| ATP-dependent DNA helicase Q1 [Cricetulus griseus]
Length = 648
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 1 FISSFNRANLKYEILPK----KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQ 56
F +SFNR NL YE+ K ++ +++++ LI +Y G+SGI+YC ++K+ + V +L +
Sbjct: 277 FTASFNRPNLYYEVRQKPPNAEDFIEDIVKLINGRYKGRSGIIYCFSQKDSEQVTISLQK 336
Query: 57 ERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
I A +YHA + + + V +W +N++ V TV
Sbjct: 337 LGIRAGTYHANMEPEDKTRVHTQWSANELQVVVATV 372
>gi|340502580|gb|EGR29257.1| hypothetical protein IMG5_159830 [Ichthyophthirius multifiliis]
Length = 356
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEIL--PKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQER 58
F SFNR NL Y+++ P V++ +++ IK K++ QSGI+YC T+K+ S++ L ++
Sbjct: 165 FQCSFNRPNLYYDVIQVPNNQVIQHMVTFIKEKFNRQSGIIYCCTKKDTRSLSEELTKKH 224
Query: 59 -INAISYHAGLADKLRNEVQMKWISNKVHV 87
IN+ Y++ L+D +++VQ W+ N + +
Sbjct: 225 GINSCYYNSKLSDSEKDKVQNLWMQNDIQI 254
>gi|422404179|ref|ZP_16481233.1| ATP-dependent DNA helicase RecQ, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330876184|gb|EGH10333.1| ATP-dependent DNA helicase RecQ [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 420
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VA L++
Sbjct: 140 FLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRS-DAGIVYCLSRKKVDEVAVFLSENGYP 198
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R Q ++++ +
Sbjct: 199 ALPYHAGLPSETRAANQKRFLNEE 222
>gi|329962624|ref|ZP_08300572.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328529655|gb|EGF56553.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 727
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 FISSFNRANLKYEILPKK-NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERI 59
F SSFNR NL YE+ PK NV +++I IK +SGI+YCL+RK+ + +A L I
Sbjct: 202 FKSSFNRPNLYYEVRPKTANVDRDIIKFIKNN-PEKSGIIYCLSRKKVEELAEILQANGI 260
Query: 60 NAISYHAGLADKLRNEVQMKWISNKVHV 87
NA +YHAG+ R + Q ++ K+ V
Sbjct: 261 NARAYHAGMDSATRTQNQDDFLMEKIDV 288
>gi|322708811|gb|EFZ00388.1| QDE3 protein [Metarhizium anisopliae ARSEF 23]
Length = 1697
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 1 FISSFNRANLKYEILPKK---NVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQE 57
F SFNR NL YE+ KK N + + SLI AKY +GIVY L+RK+ + VA LA
Sbjct: 1029 FSQSFNRPNLYYEVRTKKSHANATESIASLINAKYHNTTGIVYTLSRKQAEEVAQTLAGY 1088
Query: 58 RINAISYHAGLADKLRNEVQMKWISNKVHV 87
I A YHA + + + +VQ W + V
Sbjct: 1089 GIAARHYHAAIDPQAKVDVQRSWQKGDIKV 1118
>gi|403215321|emb|CCK69820.1| hypothetical protein KNAG_0D00680 [Kazachstania naganishii CBS
8797]
Length = 881
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 4 SFNRANLKYEILPKKN--VLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINA 61
SFNR NL Y+ +PK N + +++ +K + GQSGI+YC ++ C+ + A L +E IN
Sbjct: 423 SFNRDNLFYQSIPKNNKTSIPLIVNSLKTVFRGQSGIIYCHSKIACEKLTALLKKEGINC 482
Query: 62 ISYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W +N++ V
Sbjct: 483 RFYHAGMDTTDRELVQRGWQANQIQV 508
>gi|386355962|ref|YP_006054208.1| ATP-dependent DNA helicase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806469|gb|AEW94685.1| ATP-dependent DNA helicase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 648
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I K + ++++ L++ ++ G +GIVYCL+R + A LA + +
Sbjct: 205 FVASFDRPNIQYRITAKNDPKRQLLDLLRTEHPGDAGIVYCLSRASVEKTAEYLAGKGVE 264
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R E Q +++
Sbjct: 265 ALPYHAGLDARTRAEHQSRFL 285
>gi|357399920|ref|YP_004911845.1| ATP-dependent DNA helicase RecQ [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337766329|emb|CCB75040.1| ATP-dependent DNA helicase recQ [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 654
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 53/81 (65%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F++SF+R N++Y I K + ++++ L++ ++ G +GIVYCL+R + A LA + +
Sbjct: 211 FVASFDRPNIQYRITAKNDPKRQLLDLLRTEHPGDAGIVYCLSRASVEKTAEYLAGKGVE 270
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL + R E Q +++
Sbjct: 271 ALPYHAGLDARTRAEHQSRFL 291
>gi|91775306|ref|YP_545062.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91775450|ref|YP_545206.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709293|gb|ABE49221.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709437|gb|ABE49365.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|167042457|gb|ABZ07183.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 611
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
FISSF+R N++Y + K N K+++ +++++ +GI+YCL+R++ + AA L ++ +
Sbjct: 202 FISSFDRPNIRYRVALKNNARKQLLGFLESEHPNDAGIIYCLSRRKVEETAAWLKEQGWD 261
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL +R Q +++
Sbjct: 262 ALPYHAGLDATVRQANQQRFL 282
>gi|398925314|ref|ZP_10661808.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM48]
gi|398172221|gb|EJM60095.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM48]
Length = 708
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ + VAA L+ +
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVEEVAAFLSAQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + LR Q ++++ +
Sbjct: 255 ALPYHAGLPNDLRAYHQKRFLNEE 278
>gi|337277744|ref|YP_004617215.1| ATP-dependent DNA helicase [Ramlibacter tataouinensis TTB310]
gi|334728820|gb|AEG91196.1| Candidate ATP-dependent DNA helicase [Ramlibacter tataouinensis
TTB310]
Length = 621
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 54/81 (66%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+ KK+ +++ I+ +++G++GIVYC +RK + A L+ + +
Sbjct: 203 FVSSFDRPNISYTIVEKKDPTLQLLRFIEGEHAGEAGIVYCQSRKRVEETAQTLSGQGLT 262
Query: 61 AISYHAGLADKLRNEVQMKWI 81
A+ YHAGL ++R Q +++
Sbjct: 263 ALPYHAGLDTEVRQRHQDRFL 283
>gi|357484579|ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
gi|355513912|gb|AES95535.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 1 FISSFNRANLKYEILPKKNVLK----EVISLIKAKYSG-QSGIVYCLTRKECDSVAAALA 55
F+S+ NR NL Y + K +V K E+ I+ Y +SGIVYC +RKEC+ VA L
Sbjct: 258 FVSTVNRPNLFYMVKEKSSVSKVVVDEIAEFIQESYPNHESGIVYCFSRKECEQVAKELR 317
Query: 56 QERINAISYHAGLADKLRNEVQMKWISNKVHVGHWTV 92
+ I+A YHA + R +V M+W +NK+ V TV
Sbjct: 318 ERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTV 354
>gi|124004539|ref|ZP_01689384.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123990111|gb|EAY29625.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 728
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F SSFNR NL YE+ PK +V K++I +K K G+SGI+YCL+RK+ + + L I
Sbjct: 200 FKSSFNRPNLYYEVRPKIHVKKQLIKYLKNK-KGESGIIYCLSRKKVEEIYEFLKVNDIK 258
Query: 61 AISYHAGLADKLRNEVQMKWISNKVHV 87
A+ YHAGL +R Q +++ +
Sbjct: 259 ALPYHAGLDSSVRMRNQDAFLNEDADI 285
>gi|259148775|emb|CAY82020.1| Sgs1p [Saccharomyces cerevisiae EC1118]
Length = 1447
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ +K+++ Q+GI+YC ++K C+ +A + + I
Sbjct: 869 SFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCA 928
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W ++++ V
Sbjct: 929 YYHAGMEPDERLSVQKAWQADEIQV 953
>gi|256271606|gb|EEU06648.1| Sgs1p [Saccharomyces cerevisiae JAY291]
Length = 1447
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ +K+++ Q+GI+YC ++K C+ +A + + I
Sbjct: 869 SFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCA 928
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W ++++ V
Sbjct: 929 YYHAGMEPDERLSVQKAWQADEIQV 953
>gi|392297356|gb|EIW08456.1| Sgs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1341
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ +K+++ Q+GI+YC ++K C+ +A + + I
Sbjct: 763 SFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCA 822
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W ++++ V
Sbjct: 823 YYHAGMEPDERLSVQKAWQADEIQV 847
>gi|323303418|gb|EGA57213.1| Sgs1p [Saccharomyces cerevisiae FostersB]
Length = 1423
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ +K+++ Q+GI+YC ++K C+ +A + + I
Sbjct: 869 SFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCA 928
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W ++++ V
Sbjct: 929 YYHAGMEPDERLSVQKAWQADEIQV 953
>gi|6323844|ref|NP_013915.1| Sgs1p [Saccharomyces cerevisiae S288c]
gi|464912|sp|P35187.1|SGS1_YEAST RecName: Full=ATP-dependent helicase SGS1; AltName: Full=Helicase
TPS1
gi|349194|gb|AAA35167.1| bps. 390..881 = homology to E.coli recQ; bps. 414..430 = ATP
binding site [Saccharomyces cerevisiae]
gi|642282|emb|CAA87811.1| Tps1p [Saccharomyces cerevisiae]
gi|726279|gb|AAB60289.1| Sgs1p [Saccharomyces cerevisiae]
gi|285814193|tpg|DAA10088.1| TPA: Sgs1p [Saccharomyces cerevisiae S288c]
Length = 1447
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ +K+++ Q+GI+YC ++K C+ +A + + I
Sbjct: 869 SFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCA 928
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W ++++ V
Sbjct: 929 YYHAGMEPDERLSVQKAWQADEIQV 953
>gi|323336083|gb|EGA77356.1| Sgs1p [Saccharomyces cerevisiae Vin13]
Length = 1447
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ +K+++ Q+GI+YC ++K C+ +A + + I
Sbjct: 869 SFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCA 928
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W ++++ V
Sbjct: 929 YYHAGMEPDERLSVQKAWQADEIQV 953
>gi|190408415|gb|EDV11680.1| ATP-dependent helicase SGS1 [Saccharomyces cerevisiae RM11-1a]
Length = 1447
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 4 SFNRANLKYEILPK-KNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERINAI 62
SFNR NL YE+ K KN + E+ +K+++ Q+GI+YC ++K C+ +A + + I
Sbjct: 869 SFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCA 928
Query: 63 SYHAGLADKLRNEVQMKWISNKVHV 87
YHAG+ R VQ W ++++ V
Sbjct: 929 YYHAGMEPDERLSVQKAWQADEIQV 953
>gi|407365735|ref|ZP_11112267.1| ATP-dependent DNA helicase RecQ [Pseudomonas mandelii JR-1]
Length = 708
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAVFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R Q ++++ +
Sbjct: 255 ALPYHAGLPNDTRAHHQKRFLNEE 278
>gi|398861435|ref|ZP_10617064.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM79]
gi|398233096|gb|EJN19040.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM79]
Length = 708
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAVFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R Q ++++ +
Sbjct: 255 ALPYHAGLPNDTRAHHQKRFLNEE 278
>gi|398903585|ref|ZP_10651746.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM50]
gi|398176826|gb|EJM64528.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM50]
Length = 708
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAVFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R Q ++++ +
Sbjct: 255 ALPYHAGLPNDTRAHHQKRFLNEE 278
>gi|398945282|ref|ZP_10671703.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM41(2012)]
gi|398157183|gb|EJM45585.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. GM41(2012)]
Length = 708
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 1 FISSFNRANLKYEILPKKNVLKEVISLIKAKYSGQSGIVYCLTRKECDSVAAALAQERIN 60
F+SSF+R N+ Y I+PK+ K++++ + + S +GIVYCL+RK+ D VA L+++
Sbjct: 196 FLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRS-DAGIVYCLSRKKVDEVAVFLSEQGFP 254
Query: 61 AISYHAGLADKLRNEVQMKWISNK 84
A+ YHAGL + R Q ++++ +
Sbjct: 255 ALPYHAGLPNDTRAHHQKRFLNEE 278
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,786,878,958
Number of Sequences: 23463169
Number of extensions: 100729646
Number of successful extensions: 271979
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7563
Number of HSP's successfully gapped in prelim test: 793
Number of HSP's that attempted gapping in prelim test: 254034
Number of HSP's gapped (non-prelim): 16450
length of query: 184
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 51
effective length of database: 9,238,593,890
effective search space: 471168288390
effective search space used: 471168288390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)