Your job contains 1 sequence.
>psy4370
MPLTWEVYEEWPFSRKHMSKQRVMSPFKPGLSLLWACYRGHNQGKSVSGKSSSKRKADEI
WSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLLRVLNAVNRNWGGSSWDMKTLME
CCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQPKAITLGL
IERLTKNADPV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4370
(191 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BZV7 - symbol:TRIP12 "Uncharacterized protein... 235 1.0e-28 2
UNIPROTKB|E1B7Q7 - symbol:TRIP12 "E3 ubiquitin-protein li... 228 1.6e-28 2
UNIPROTKB|Q14669 - symbol:TRIP12 "E3 ubiquitin-protein li... 228 5.4e-28 2
MGI|MGI:1309481 - symbol:Trip12 "thyroid hormone receptor... 228 5.6e-28 2
RGD|1306607 - symbol:Trip12 "thyroid hormone receptor int... 228 5.6e-28 2
UNIPROTKB|F6X7F9 - symbol:TRIP12 "Uncharacterized protein... 228 1.1e-27 2
UNIPROTKB|E2R657 - symbol:TRIP12 "Uncharacterized protein... 228 1.1e-27 2
UNIPROTKB|J9NRQ4 - symbol:TRIP12 "Uncharacterized protein... 228 1.1e-27 2
ZFIN|ZDB-GENE-041111-262 - symbol:trip12 "thyroid hormone... 231 1.4e-26 2
UNIPROTKB|B4F6W9 - symbol:trip12 "E3 ubiquitin-protein li... 229 3.5e-26 2
FB|FBgn0260794 - symbol:ctrip "circadian trip" species:72... 195 1.1e-23 2
UNIPROTKB|I3LK74 - symbol:TRIP12 "Uncharacterized protein... 182 7.8e-23 2
UNIPROTKB|H7C2Y1 - symbol:TRIP12 "E3 ubiquitin-protein li... 222 2.2e-18 1
UNIPROTKB|A8I5Z4 - symbol:CHLREDRAFT_113116 "Predicted pr... 168 9.8e-12 1
UNIPROTKB|G4NHH2 - symbol:MGG_03841 "E3 ubiquitin-protein... 160 3.3e-11 2
TAIR|locus:2121224 - symbol:KAK "AT4G38600" species:3702 ... 144 6.6e-11 2
UNIPROTKB|Q7S5Y8 - symbol:NCU09866 "Putative uncharacteri... 157 6.8e-11 2
ASPGD|ASPL0000044576 - symbol:hulC species:162425 "Emeric... 155 7.6e-11 2
UNIPROTKB|Q5BCI4 - symbol:AN1746.2 "Ubiquitin-protein lig... 155 7.6e-11 2
CGD|CAL0003293 - symbol:orf19.3237 species:5476 "Candida ... 143 1.5e-09 2
UNIPROTKB|Q0DHI3 - symbol:Os05g0463900 "Os05g0463900 prot... 135 1.5e-09 2
TAIR|locus:2151306 - symbol:UPL4 "AT5G02880" species:3702... 140 2.9e-09 2
UNIPROTKB|Q0E4T3 - symbol:Os02g0101700 "Os02g0101700 prot... 128 3.0e-09 2
POMBASE|SPAC12B10.01c - symbol:SPAC12B10.01c "ubiquitin-p... 135 1.6e-07 1
SGD|S000001493 - symbol:UFD4 "Ubiquitin-protein ligase (E... 131 3.8e-07 1
DICTYBASE|DDB_G0287221 - symbol:DDB_G0287221 "armadillo r... 132 3.9e-07 1
UNIPROTKB|Q75DK8 - symbol:AGOS_ABR013W "ABR013Wp" species... 126 8.6e-06 1
UNIPROTKB|A8I1Z0 - symbol:CHLREDRAFT_126603 "Predicted pr... 115 6.2e-05 1
>UNIPROTKB|E1BZV7 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0046966 "thyroid hormone receptor
binding" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:2000780 "negative
regulation of double-strand break repair" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
OMA:LNMNGCS EMBL:AC147645 IPI:IPI00588987
Ensembl:ENSGALT00000004623 Uniprot:E1BZV7
Length = 2035
Score = 235 (87.8 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 44/78 (56%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+KYLF +LS + S +QR FLQFVTGSPRLPVG
Sbjct: 1916 TWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSL 1975
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1976 NPPLTIVRKTFESTENPD 1993
Score = 132 (51.5 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W DG+ P +PL+ YL T P ++T D L V+ LL
Sbjct: 1459 RGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLL 1518
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1519 RVLHAISRYW 1528
Score = 39 (18.8 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 553 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 583
>UNIPROTKB|E1B7Q7 [details] [associations]
symbol:TRIP12 "E3 ubiquitin-protein ligase TRIP12"
species:9913 "Bos taurus" [GO:0009790 "embryo development"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:2000780
"negative regulation of double-strand break repair" evidence=ISS]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006281 GO:GO:0006974 GO:GO:0009790
GO:GO:0004842 GO:GO:0042787 InterPro:IPR004170 PROSITE:PS50918
SUPFAM:SSF56204 GeneTree:ENSGT00530000063470 GO:GO:2000780
GO:GO:1901315 KO:K10590 EMBL:DAAA02006173 EMBL:DAAA02006174
EMBL:DAAA02006175 EMBL:BC119851 IPI:IPI00825667
RefSeq:NP_001178132.1 UniGene:Bt.6328 Ensembl:ENSBTAT00000038151
GeneID:514387 KEGG:bta:514387 CTD:9320 OMA:LNMNGCS NextBio:20871310
Uniprot:E1B7Q7
Length = 1992
Score = 228 (85.3 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 1873 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL 1932
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1933 NPPLTIVRKTFESTENPD 1950
Score = 137 (53.3 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W+DG+ P +PL+ YL T P ++T D L V+ LL
Sbjct: 1416 RGRAQTAPTKTSPRNAKKHDELWNDGVCPSVSNPLEVYLIPTAPENITFEDPSLDVILLL 1475
Query: 99 RVLNAVNRNW 108
RVL+AV+R W
Sbjct: 1476 RVLHAVSRYW 1485
Score = 39 (18.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 507 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 537
>UNIPROTKB|Q14669 [details] [associations]
symbol:TRIP12 "E3 ubiquitin-protein ligase TRIP12"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;NAS;IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process"
evidence=IDA;IMP;IBA] [GO:0046966 "thyroid hormone receptor
binding" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:2000780 "negative regulation
of double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009790 "embryo development" evidence=ISS]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 UniPathway:UPA00143 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006281 GO:GO:0006974 GO:GO:0009790 GO:GO:0004842
GO:GO:0046966 GO:GO:0042787 InterPro:IPR004170 PROSITE:PS50918
EMBL:AC093384 SUPFAM:SSF56204 eggNOG:COG5021 GO:GO:2000780
GO:GO:1901315 KO:K10590 CTD:9320 OMA:LNMNGCS EMBL:EU489742
EMBL:D28476 EMBL:AC009973 EMBL:AC105380 EMBL:BC114556 EMBL:BC113891
EMBL:L40383 IPI:IPI00032342 IPI:IPI00783250 IPI:IPI00871861
RefSeq:NP_004229.1 UniGene:Hs.591633 ProteinModelPortal:Q14669
SMR:Q14669 DIP:DIP-58584N IntAct:Q14669 MINT:MINT-1192877
STRING:Q14669 PhosphoSite:Q14669 DMDM:2499839 PaxDb:Q14669
PRIDE:Q14669 Ensembl:ENST00000283943 Ensembl:ENST00000389044
Ensembl:ENST00000389045 GeneID:9320 KEGG:hsa:9320 UCSC:uc002vpw.1
GeneCards:GC02M230595 HGNC:HGNC:12306 MIM:604506 neXtProt:NX_Q14669
PharmGKB:PA36985 HOGENOM:HOG000007873 HOVERGEN:HBG062085
OrthoDB:EOG4MCWZF ChiTaRS:TRIP12 GenomeRNAi:9320 NextBio:34913
ArrayExpress:Q14669 Bgee:Q14669 CleanEx:HS_TRIP12
Genevestigator:Q14669 GermOnline:ENSG00000153827 Uniprot:Q14669
Length = 1992
Score = 228 (85.3 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 1873 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL 1932
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1933 NPPLTIVRKTFESTENPD 1950
Score = 132 (51.5 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W DG+ P +PL+ YL T P ++T D L V+ LL
Sbjct: 1416 RGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVILLL 1475
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1476 RVLHAISRYW 1485
Score = 39 (18.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 507 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 537
>MGI|MGI:1309481 [details] [associations]
symbol:Trip12 "thyroid hormone receptor interactor 12"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IBA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0009790 "embryo
development" evidence=IMP] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO;IBA]
[GO:0046966 "thyroid hormone receptor binding" evidence=ISO]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISO] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISO] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1309481 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006281
GO:GO:0006974 GO:GO:0009790 GO:GO:0004842 GO:GO:0042787
InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 GO:GO:2000780 GO:GO:1901315 KO:K10590
CTD:9320 OMA:LNMNGCS ChiTaRS:TRIP12 EMBL:AC123882 EMBL:CH466629
EMBL:AK034814 EMBL:AK134397 EMBL:AK158807 EMBL:BC034113
RefSeq:NP_598736.4 UniGene:Mm.209265 IntAct:G5E870 PRIDE:G5E870
Ensembl:ENSMUST00000027421 GeneID:14897 KEGG:mmu:14897
NextBio:287187 Bgee:G5E870 Uniprot:G5E870
Length = 2025
Score = 228 (85.3 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 1906 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL 1965
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1966 NPPLTIVRKTFESTENPD 1983
Score = 132 (51.5 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W DG+ P +PL+ YL T P ++T D L V+ LL
Sbjct: 1449 RGRAQTAPTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDPSLDVILLL 1508
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1509 RVLHAISRYW 1518
Score = 39 (18.8 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 513 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 543
>RGD|1306607 [details] [associations]
symbol:Trip12 "thyroid hormone receptor interactor 12"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO;ISS;IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005654 "nucleoplasm" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO;ISS] [GO:0009790 "embryo development"
evidence=ISO;ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS;IBA] [GO:0046966 "thyroid hormone receptor
binding" evidence=ISO] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=ISO;ISS] [GO:2000780
"negative regulation of double-strand break repair"
evidence=ISO;ISS] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 RGD:1306607 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006281
GO:GO:0006974 GO:GO:0009790 GO:GO:0004842 GO:GO:0042787
InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GO:GO:2000780 GO:GO:1901315 KO:K10590 CTD:9320 EMBL:BC088304
EMBL:BC100624 IPI:IPI00362998 RefSeq:NP_001026829.1 UniGene:Rn.8277
PRIDE:F1LP64 Ensembl:ENSRNOT00000022873 GeneID:316575
KEGG:rno:316575 NextBio:671026 ArrayExpress:F1LP64 Uniprot:F1LP64
Length = 2025
Score = 228 (85.3 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 1906 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL 1965
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1966 NPPLTIVRKTFESTENPD 1983
Score = 132 (51.5 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W DG+ P +PL+ YL T P ++T D L V+ LL
Sbjct: 1449 RGRAQTAPTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDPSLDVILLL 1508
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1509 RVLHAISRYW 1518
Score = 39 (18.8 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 513 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 543
>UNIPROTKB|F6X7F9 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 Ensembl:ENSCAFT00000016899
EMBL:AAEX03014420 Uniprot:F6X7F9
Length = 1980
Score = 228 (85.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 1861 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL 1920
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1921 NPPLTIVRKTFESTENPD 1938
Score = 129 (50.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W DG+ P +PL+ YL + P ++T D L V+ LL
Sbjct: 1404 RGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLISSPPENITFEDPSLDVILLL 1463
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1464 RVLHAISRYW 1473
Score = 39 (18.8 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 513 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 543
>UNIPROTKB|E2R657 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 Ensembl:ENSCAFT00000016899
Uniprot:E2R657
Length = 1993
Score = 228 (85.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 1874 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL 1933
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1934 NPPLTIVRKTFESTENPD 1951
Score = 129 (50.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W DG+ P +PL+ YL + P ++T D L V+ LL
Sbjct: 1417 RGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLISSPPENITFEDPSLDVILLL 1476
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1477 RVLHAISRYW 1486
Score = 39 (18.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 507 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 537
>UNIPROTKB|J9NRQ4 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
EMBL:AAEX03014420 Ensembl:ENSCAFT00000045557 OMA:GNGTGGX
Uniprot:J9NRQ4
Length = 2011
Score = 228 (85.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 1892 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL 1951
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1952 NPPLTIVRKTFESTENPD 1969
Score = 129 (50.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W DG+ P +PL+ YL + P ++T D L V+ LL
Sbjct: 1435 RGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLISSPPENITFEDPSLDVILLL 1494
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1495 RVLHAISRYW 1504
Score = 39 (18.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 526 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 556
>ZFIN|ZDB-GENE-041111-262 [details] [associations]
symbol:trip12 "thyroid hormone receptor interactor
12" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=ISS] [GO:2000780 "negative regulation of double-strand
break repair" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 ZFIN:ZDB-GENE-041111-262 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016567 GO:GO:0005622
GO:GO:0004842 InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918
SUPFAM:SSF56204 GeneTree:ENSGT00530000063470 EMBL:BX255887
EMBL:CU928079 IPI:IPI00866688 Ensembl:ENSDART00000087566
ArrayExpress:F1Q529 Bgee:F1Q529 Uniprot:F1Q529
Length = 2095
Score = 231 (86.4 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 43/78 (55%), Positives = 54/78 (69%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
SWD+KTLMECCR DHGY H+S+A+++LF VLS + + +QR FLQFVTGSPRLPVG
Sbjct: 1976 SWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSL 2035
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 2036 NPPLTIVRKTFESTENPD 2053
Score = 116 (45.9 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W +G+ P +PL+ YL P +T D + V+ LL
Sbjct: 1519 RGRAQTAPTKTSPRNAKKQDELWHEGVCPSVANPLETYLICDPPEGITFDDPSMEVILLL 1578
Query: 99 RVLNAVNRNW 108
RVL++++R W
Sbjct: 1579 RVLHSISRYW 1588
Score = 37 (18.1 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 589 YMMEALPRSSAVVVDAIPVFLEKLQVIQFID 619
>UNIPROTKB|B4F6W9 [details] [associations]
symbol:trip12 "E3 ubiquitin-protein ligase TRIP12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0006974 "response to DNA damage
stimulus" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISS] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006281 GO:GO:0006974 GO:GO:0009790
GO:GO:0004842 GO:GO:0042787 InterPro:IPR004170 Pfam:PF02825
PROSITE:PS50918 SUPFAM:SSF56204 GO:GO:2000780 GO:GO:1901315
KO:K10590 CTD:9320 HOVERGEN:HBG062085 EMBL:AAMC01022090
EMBL:AAMC01022091 EMBL:AAMC01022092 EMBL:AAMC01022093
EMBL:AAMC01022094 EMBL:AAMC01022095 EMBL:AAMC01022096 EMBL:BC168042
EMBL:BC166201 RefSeq:NP_001136384.1 UniGene:Str.66021
ProteinModelPortal:B4F6W9 STRING:B4F6W9 GeneID:100158539
KEGG:xtr:100158539 Xenbase:XB-GENE-6071044 Uniprot:B4F6W9
Length = 2056
Score = 229 (85.7 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 42/77 (54%), Positives = 52/77 (67%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
WD+KTLMECCR DHGY H+S+A+K+LF +LS + +QR FLQFVTGSPRLPVG
Sbjct: 1938 WDVKTLMECCRPDHGYTHDSRAVKFLFEILSSFDKEQQRLFLQFVTGSPRLPVGGFRSLN 1997
Query: 173 PKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1998 PPLTIVRKTFEATENPD 2014
Score = 114 (45.2 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIW--SDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLT 96
RG Q DE+W DG+ P +PL+ YL P ++T D L V+
Sbjct: 1478 RGRAQTAPTKTSPRNSKKHDELWHGKDGVCPRILNPLEVYLISGPPENITFDDPSLDVVI 1537
Query: 97 LLRVLNAVNRNW 108
LLRVL+A++R W
Sbjct: 1538 LLRVLHAISRYW 1549
Score = 39 (18.8 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 549 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 579
>FB|FBgn0260794 [details] [associations]
symbol:ctrip "circadian trip" species:7227 "Drosophila
melanogaster" [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0042752 "regulation
of circadian rhythm" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
InterPro:IPR018123 PROSITE:PS50237 SMART:SM00119 SMART:SM00678
EMBL:AE014297 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0022008 GO:GO:0008270 GO:GO:0042752 GO:GO:0016567
GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170 Pfam:PF02825
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
RefSeq:NP_001189170.1 RefSeq:NP_649496.3 STRING:Q9VN58
EnsemblMetazoa:FBtr0301437 EnsemblMetazoa:FBtr0303911 GeneID:40596
KEGG:dme:Dmel_CG42574 UCSC:CG17735-RB FlyBase:FBgn0260794
InParanoid:Q9VN58 OMA:SAGANEN OrthoDB:EOG47H44W PhylomeDB:Q9VN58
GenomeRNAi:40596 NextBio:819575 ArrayExpress:Q9VN58 Bgee:Q9VN58
Uniprot:Q9VN58
Length = 3140
Score = 195 (73.7 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 38/80 (47%), Positives = 55/80 (68%)
Query: 111 SSWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTK 170
S W++K L E CR DHG++ +S+AI+YL+ +L+ Y+ EQR FLQFVTGSPRLP G
Sbjct: 3020 SRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKA 3079
Query: 171 CQPKAITLGLIERLTKNADP 190
P +T+ + + L +N +P
Sbjct: 3080 LTPP-LTI-VRKTLDENQNP 3097
Score = 128 (50.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 59 EIWSDGLVPLSRSPLDPYLSDTLPPSV-TITDACLPVLTLLRVLNAVNRNW 108
E+W +G+ P+ S L P+LS +LP V T+ DA L L +LRV++A+NR+W
Sbjct: 2448 ELWHEGIAPVVISALKPFLSSSLPADVVTVQDASLDALCMLRVIHALNRHW 2498
>UNIPROTKB|I3LK74 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000780 "negative regulation of double-strand break
repair" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 OMA:LNMNGCS Ensembl:ENSSSCT00000029290
Uniprot:I3LK74
Length = 2002
Score = 182 (69.1 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 37/78 (47%), Positives = 47/78 (60%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD KTLMECCR DHGY H+S+A+K+LF +LS + +FVTGSPRLPVG
Sbjct: 1892 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSF---------EFVTGSPRLPVGGFRSL 1942
Query: 172 QPKAITLGLIERLTKNAD 189
P + T+N D
Sbjct: 1943 NPPLTIVRKTFESTENPD 1960
Score = 129 (50.5 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 39 RGHNQXXXXXXXXXXXXXADEIWSDGLVPLSRSPLDPYLSDTLPPSVTITDACLPVLTLL 98
RG Q DE+W+DG+ P +PL+ YL P ++T D L V+ LL
Sbjct: 1453 RGRAQTAPTKTSPRNAKKHDELWNDGVCPSVSNPLEVYLIPAPPENITFEDPSLDVILLL 1512
Query: 99 RVLNAVNRNW 108
RVL+A++R W
Sbjct: 1513 RVLHAISRYW 1522
Score = 39 (18.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 YLSDTLPPSVTITDACLPV-LTLLRVLNAVN 105
Y+ + LP S + +PV L L+V+ ++
Sbjct: 515 YMMEALPRSSAVVVDAIPVFLEKLQVIQCID 545
>UNIPROTKB|H7C2Y1 [details] [associations]
symbol:TRIP12 "E3 ubiquitin-protein ligase TRIP12"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 EMBL:AC093384
SUPFAM:SSF56204 EMBL:AC009973 EMBL:AC105380 HGNC:HGNC:12306
ChiTaRS:TRIP12 ProteinModelPortal:H7C2Y1 Ensembl:ENST00000418123
Bgee:H7C2Y1 Uniprot:H7C2Y1
Length = 187
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVG 166
+WD KTLMECCR DHGY H+S+A+K+LF +LS + + +QR FLQFVTGSPRLPVG
Sbjct: 133 TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVG 187
>UNIPROTKB|A8I5Z4 [details] [associations]
symbol:CHLREDRAFT_113116 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
KO:K10590 EMBL:DS496113 RefSeq:XP_001700779.1 UniGene:Cre.5104
EnsemblPlants:EDP07033 GeneID:5726328 KEGG:cre:CHLREDRAFT_113116
ProtClustDB:CLSN2701428 Uniprot:A8I5Z4
Length = 508
Score = 168 (64.2 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 110 GSSWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKT 169
G W ++ L E + DHGY NS+ +KYL ++S + +QR FL+FVTG PRLP G T
Sbjct: 377 GERWTLQALSEAIKFDHGYTANSQPVKYLLEIMSELDAADQRAFLRFVTGCPRLPPGGLT 436
Query: 170 KCQPK 174
QP+
Sbjct: 437 ALQPR 441
>UNIPROTKB|G4NHH2 [details] [associations]
symbol:MGG_03841 "E3 ubiquitin-protein ligase UPL3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016567 GO:GO:0005622
GO:GO:0004842 GO:GO:0043581 EMBL:CM001236 SUPFAM:SSF56204 KO:K10590
RefSeq:XP_003720049.1 ProteinModelPortal:G4NHH2
EnsemblFungi:MGG_03841T0 GeneID:2677343 KEGG:mgr:MGG_03841
Uniprot:G4NHH2
Length = 1923
Score = 160 (61.4 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W ++TLM+ + DHGYN +S ++K L +S S E+RDFLQF TGSP+LP+G
Sbjct: 1805 WSLETLMDSIKADHGYNMDSLSVKNLLQFMSELSPAERRDFLQFTTGSPKLPIGGFKSLN 1864
Query: 173 P 173
P
Sbjct: 1865 P 1865
Score = 39 (18.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 82 PPSVTITDACLPVLTLLRVLNAVNRN 107
P S++ A +L LL++L+ +N N
Sbjct: 1392 PASLSKHPATTSILRLLKMLHDLNAN 1417
>TAIR|locus:2121224 [details] [associations]
symbol:KAK "AT4G38600" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0016881 "acid-amino acid
ligase activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0042023 "DNA endoreduplication" evidence=IMP] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA] Pfam:PF00632
InterPro:IPR000225 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50176 PROSITE:PS50237 SMART:SM00119 SMART:SM00185
UniPathway:UPA00143 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005622 GO:GO:0004842 GO:GO:0042787
GO:GO:0010091 EMBL:AL161593 GO:GO:0042023 EMBL:AL035540
SUPFAM:SSF56204 eggNOG:COG5021 HSSP:Q9UEP9 KO:K10590 OMA:LNMNGCS
EMBL:AY265959 EMBL:AK229635 EMBL:BN000268 IPI:IPI00548433
PIR:T05688 PIR:T05689 RefSeq:NP_849567.2 UniGene:At.47500
UniGene:At.708 ProteinModelPortal:Q6WWW4 SMR:Q6WWW4 STRING:Q6WWW4
PaxDb:Q6WWW4 PRIDE:Q6WWW4 ProMEX:Q6WWW4 EnsemblPlants:AT4G38600.1
GeneID:830017 KEGG:ath:AT4G38600 TAIR:At4g38600
HOGENOM:HOG000238707 InParanoid:Q6WWW4 PhylomeDB:Q6WWW4
ProtClustDB:CLSN2680326 ArrayExpress:Q6WWW4 Genevestigator:Q6WWW4
Uniprot:Q6WWW4
Length = 1888
Score = 144 (55.7 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W+++TL E + DHGYN S AI L ++ ++ +QR F QFVTG+PRLP G
Sbjct: 1760 WEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLN 1819
Query: 173 PK 174
PK
Sbjct: 1820 PK 1821
Score = 52 (23.4 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 71 SPLDPYLSDTLPPSVTITDACLPVLTLLRVLNAVNR 106
S LD L LP + +++ VL LLRVL +N+
Sbjct: 1312 SLLDSILQGELPCDLEKSNSTYNVLALLRVLEGLNQ 1347
>UNIPROTKB|Q7S5Y8 [details] [associations]
symbol:NCU09866 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 KO:K10590 OrthoDB:EOG49GPQP HOGENOM:HOG000216026
EMBL:AABX02000100 RefSeq:XP_960183.1 UniGene:Ncr.15912
ProteinModelPortal:Q7S5Y8 EnsemblFungi:EFNCRT00000009767
GeneID:3876330 KEGG:ncr:NCU09866 OMA:NIVETLY Uniprot:Q7S5Y8
Length = 1933
Score = 157 (60.3 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W ++TL + + DHGYN +SK+++ L ++S + E+RDFLQF TGSP+LP+G
Sbjct: 1815 WSLETLNDSIKADHGYNMDSKSVRNLLQIMSELTLAERRDFLQFTTGSPKLPIGGFKSLN 1874
Query: 173 P 173
P
Sbjct: 1875 P 1875
Score = 39 (18.8 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 6 EVYEEWPFSRKHMSKQRVMSP 26
E E+P S + +QRV P
Sbjct: 78 EAAAEFPSSARRSKRQRVTQP 98
>ASPGD|ASPL0000044576 [details] [associations]
symbol:hulC species:162425 "Emericella nidulans"
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACD01000027 EMBL:BN001307 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590 OMA:LNMNGCS
OrthoDB:EOG49GPQP RefSeq:XP_659350.1 ProteinModelPortal:Q5BCI4
EnsemblFungi:CADANIAT00008393 GeneID:2875694 KEGG:ani:AN1746.2
HOGENOM:HOG000216026 Uniprot:Q5BCI4
Length = 1820
Score = 155 (59.6 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W ++TLM+ + DHG+N +S++++ L +S + ++RDFLQFVTGSP+LP+G
Sbjct: 1702 WSIETLMDSIKADHGFNMDSRSVRNLLQTMSELDTQQRRDFLQFVTGSPKLPIGGFKSLT 1761
Query: 173 P 173
P
Sbjct: 1762 P 1762
Score = 40 (19.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 78 SDTLPPSVTITDACLPVLTLLRVLNAVN 105
S +P S+ +L LLRVL+ +N
Sbjct: 1286 SSGMPSSLNQDHITSSILRLLRVLHGMN 1313
>UNIPROTKB|Q5BCI4 [details] [associations]
symbol:AN1746.2 "Ubiquitin-protein ligase Ufd4, putative
(AFU_orthologue; AFUA_6G08880)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACD01000027 EMBL:BN001307 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590 OMA:LNMNGCS
OrthoDB:EOG49GPQP RefSeq:XP_659350.1 ProteinModelPortal:Q5BCI4
EnsemblFungi:CADANIAT00008393 GeneID:2875694 KEGG:ani:AN1746.2
HOGENOM:HOG000216026 Uniprot:Q5BCI4
Length = 1820
Score = 155 (59.6 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W ++TLM+ + DHG+N +S++++ L +S + ++RDFLQFVTGSP+LP+G
Sbjct: 1702 WSIETLMDSIKADHGFNMDSRSVRNLLQTMSELDTQQRRDFLQFVTGSPKLPIGGFKSLT 1761
Query: 173 P 173
P
Sbjct: 1762 P 1762
Score = 40 (19.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 78 SDTLPPSVTITDACLPVLTLLRVLNAVN 105
S +P S+ +L LLRVL+ +N
Sbjct: 1286 SSGMPSSLNQDHITSSILRLLRVLHGMN 1313
>CGD|CAL0003293 [details] [associations]
symbol:orf19.3237 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
CGD:CAL0003293 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 EMBL:AACQ01000049
EMBL:AACQ01000048 SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590
RefSeq:XP_717862.1 RefSeq:XP_717928.1 ProteinModelPortal:Q5A892
STRING:Q5A892 GeneID:3640429 GeneID:3640501 KEGG:cal:CaO19.10747
KEGG:cal:CaO19.3237 Uniprot:Q5A892
Length = 1711
Score = 143 (55.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W M TL +HGY S+AIK L +L +S E+R+FLQF+TG+P+LP+G +
Sbjct: 1593 WSMDTLTSSIVANHGYTKESEAIKSLIDILMNFSIEEKREFLQFLTGAPKLPIGGFKALR 1652
Query: 173 PK 174
P+
Sbjct: 1653 PE 1654
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 89 DACLPVLTLLRVLNAVNRNW--GG 110
D + +L LL++L +N N+ GG
Sbjct: 1175 DTTINILKLLKILFRMNNNFSNGG 1198
>UNIPROTKB|Q0DHI3 [details] [associations]
symbol:Os05g0463900 "Os05g0463900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
EMBL:AP008211 GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 KO:K10590
RefSeq:NP_001055776.1 UniGene:Os.51950 PRIDE:Q0DHI3 GeneID:4339037
KEGG:osa:4339037 Gramene:Q0DHI3 HOGENOM:HOG000030410
ProtClustDB:CLSN2695660 Uniprot:Q0DHI3
Length = 541
Score = 135 (52.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 112 SWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKC 171
+WD L++ + DHGY +S + L V+ + ++R FLQF+TGSPRLP G
Sbjct: 424 TWDFAKLVDHIKFDHGYTSSSPPVINLLEVIQEFEGHQRRAFLQFITGSPRLPPGGLAAL 483
Query: 172 QPK 174
PK
Sbjct: 484 NPK 486
Score = 35 (17.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 81 LPPSVTITDACLPVLTLLRVLNAVNR 106
LP + + +L +L+VL +NR
Sbjct: 3 LPCKLDRSSPSYDILFMLKVLEGLNR 28
>TAIR|locus:2151306 [details] [associations]
symbol:UPL4 "AT5G02880" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0016881 "acid-amino acid
ligase activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50176
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005622 GO:GO:0004842 EMBL:AL162973
GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021 HSSP:Q9UEP9 KO:K10590
HOGENOM:HOG000238707 IPI:IPI00545962 PIR:T48309 RefSeq:NP_195908.1
UniGene:At.46354 ProteinModelPortal:Q9LYZ7 SMR:Q9LYZ7 PaxDb:Q9LYZ7
PRIDE:Q9LYZ7 EnsemblPlants:AT5G02880.1 GeneID:831758
KEGG:ath:AT5G02880 TAIR:At5g02880 InParanoid:Q9LYZ7 OMA:YGSCDSD
PhylomeDB:Q9LYZ7 ProtClustDB:CLSN2687525 Genevestigator:Q9LYZ7
Uniprot:Q9LYZ7
Length = 1502
Score = 140 (54.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
+ M +++ + DHGY +S ++YL +L + +QR FLQFVTGSPRLP G
Sbjct: 1386 FSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGSPRLPHGGLASLS 1445
Query: 173 PK 174
PK
Sbjct: 1446 PK 1447
Score = 38 (18.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 76 YLSDTLPPSV-------TITDACLPVLTL 97
YL D PPSV TI C +LT+
Sbjct: 180 YLCDVYPPSVEFLVRHDTIPALCQRLLTI 208
>UNIPROTKB|Q0E4T3 [details] [associations]
symbol:Os02g0101700 "Os02g0101700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0004842 EMBL:AP008208 GO:GO:0042787
GO:GO:0010091 GO:GO:0042023 SUPFAM:SSF56204 KO:K10590
RefSeq:NP_001045591.1 UniGene:Os.28066 PRIDE:Q0E4T3 GeneID:4327983
KEGG:osa:4327983 Gramene:Q0E4T3 Uniprot:Q0E4T3
Length = 718
Score = 128 (50.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W+ +L++ + DHGY S AI L +++ ++ +Q F QFVTG+PRLP G
Sbjct: 590 WEPDSLVDNIKFDHGYTAKSPAIVNLLEIMAEFTPEQQHAFCQFVTGAPRLPPGGLAALN 649
Query: 173 PK 174
PK
Sbjct: 650 PK 651
Score = 54 (24.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 71 SPLDPYLSDTLPPSVTITDACLPVLTLLRVLNAVNR 106
S LD L LP + T++ +L LLRVL +N+
Sbjct: 132 SLLDSILQAELPCDLERTNSTYNILALLRVLEGLNQ 167
>POMBASE|SPAC12B10.01c [details] [associations]
symbol:SPAC12B10.01c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50237 SMART:SM00119 PomBase:SPAC12B10.01c GO:GO:0005829
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0004842 SUPFAM:SSF56204
eggNOG:COG5021 KO:K10590 OrthoDB:EOG49GPQP PIR:T37568 PIR:T38617
RefSeq:NP_594633.2 ProteinModelPortal:Q10435
EnsemblFungi:SPAC12B10.01c.1 GeneID:2541575 KEGG:spo:SPAC12B10.01c
OMA:HGSTNER NextBio:20802669 Uniprot:Q10435
Length = 1647
Score = 135 (52.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W TLM+ DHGY S I+ L ++S + EQRDFLQF+TGS +LP+G
Sbjct: 1529 WSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLN 1588
Query: 173 PKAITLGLIERLTK 186
P L ++ RL +
Sbjct: 1589 PP---LTVVRRLNE 1599
>SGD|S000001493 [details] [associations]
symbol:UFD4 "Ubiquitin-protein ligase (E3)" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006513 "protein monoubiquitination"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA;TAS]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA;IPI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005622 "intracellular" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
SGD:S000001493 GO:GO:0005739 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BK006944 GO:GO:0004842 GO:GO:0000209
GO:GO:0042787 EMBL:S53418 GO:GO:0006513 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00530000063470 KO:K04709
RefSeq:NP_012917.3 GeneID:853861 KEGG:sce:YKL008C
RefSeq:NP_012915.3 GeneID:853859 KEGG:sce:YKL010C KO:K10590
EMBL:Z28010 PIR:S30015 ProteinModelPortal:P33202 SMR:P33202
DIP:DIP-4873N IntAct:P33202 MINT:MINT-542956 STRING:P33202
PaxDb:P33202 PeptideAtlas:P33202 EnsemblFungi:YKL010C CYGD:YKL010c
HOGENOM:HOG000142004 OMA:NRILDFR OrthoDB:EOG49GPQP NextBio:975106
Genevestigator:P33202 GermOnline:YKL010C Uniprot:P33202
Length = 1483
Score = 131 (51.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W M TL +HGY +S I ++S + E+R FLQF+TGSP+LP+G
Sbjct: 1365 WSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLN 1424
Query: 173 PK 174
PK
Sbjct: 1425 PK 1426
>DICTYBASE|DDB_G0287221 [details] [associations]
symbol:DDB_G0287221 "armadillo repeat-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0016874 "ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000225 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119 SMART:SM00185
dictyBase:DDB_G0287221 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0004842 GO:GO:0042787
EMBL:AAFI02000099 SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590
OMA:LNMNGCS RefSeq:XP_637315.1 ProteinModelPortal:Q54KP2
EnsemblProtists:DDB0235186 GeneID:8626012 KEGG:ddi:DDB_G0287221
InParanoid:Q54KP2 Uniprot:Q54KP2
Length = 1898
Score = 132 (51.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 111 SSWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPV 165
S W + +LM+ + DHGY SK+++ +F ++S ++ E++ FL F++GSP LP+
Sbjct: 1778 SDWTLDSLMDSTKADHGYTLQSKSVQNIFQIMSEFTPQERKQFLLFISGSPHLPL 1832
>UNIPROTKB|Q75DK8 [details] [associations]
symbol:AGOS_ABR013W "ABR013Wp" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0004842 GO:GO:0042787 EMBL:AE016815 GenomeReviews:AE016815_GR
SUPFAM:SSF56204 KO:K10590 HOGENOM:HOG000142004 OrthoDB:EOG49GPQP
RefSeq:NP_982959.2 STRING:Q75DK8 EnsemblFungi:AAS50783
GeneID:4619051 KEGG:ago:AGOS_ABR013W Uniprot:Q75DK8
Length = 1424
Score = 126 (49.4 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 113 WDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRDFLQFVTGSPRLPVGAKTKCQ 172
W ++TL DHGY+ +S + L V++ + +R FLQF+TGSP+LPVG +
Sbjct: 1306 WSVETLYSYITADHGYSMDSPTLHDLIAVMAAFDQHHRRLFLQFLTGSPKLPVGGFKNLK 1365
Query: 173 P 173
P
Sbjct: 1366 P 1366
>UNIPROTKB|A8I1Z0 [details] [associations]
symbol:CHLREDRAFT_126603 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
EMBL:DS496112 RefSeq:XP_001699826.1 ProteinModelPortal:A8I1Z0
EnsemblPlants:EDP07522 GeneID:5725577 KEGG:cre:CHLREDRAFT_126603
ProtClustDB:CLSN2923308 Uniprot:A8I1Z0
Length = 352
Score = 115 (45.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 93 PVLTLLRVLNAVNRNWGGSSWDMKTLMECCRIDHGYNHNSKAIKYLFHVLSCYSSPEQRD 152
P ++L G D L + R D GY+ S A+ +L+ ++ PEQR
Sbjct: 222 PAMSLFNAQELERLVCGNPRLDFTALKDAARYDGGYSRGSAAVGWLWDIVLNELGPEQRA 281
Query: 153 FLQFVTGSPRLPVGAKTKCQP 173
FL+F TGS R P+G +P
Sbjct: 282 FLKFFTGSDRSPLGGLGSLRP 302
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 191 178 0.00086 109 3 11 22 0.41 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 621 (66 KB)
Total size of DFA: 196 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.40u 0.09s 15.49t Elapsed: 00:00:06
Total cpu time: 15.41u 0.09s 15.50t Elapsed: 00:00:06
Start: Thu Aug 15 14:22:17 2013 End: Thu Aug 15 14:22:23 2013