BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4375
(62 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28494|MA2A1_RAT Alpha-mannosidase 2 (Fragment) OS=Rattus norvegicus GN=Man2a1 PE=1
SV=1
Length = 489
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 2 EIVHPTKRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
+I+ K+ VK L+ G+LE+VTGGWVM DEAT+H FA++DQLIE
Sbjct: 190 DIIDNPKKEAVKSLLQNGQLEIVTGGWVMADEATTHYFALIDQLIE 235
>sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2
Length = 1144
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 2 EIVHPTKRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
+I+ K++ VK LI G+LE+VTGGWVM DEAT H FA++DQLIE
Sbjct: 224 DIIDIQKKDAVKSLIENGQLEIVTGGWVMPDEATPHYFALIDQLIE 269
>sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2
Length = 1150
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 2 EIVHPTKRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
+I+ K+ VK L+ G+LE+VTGGWVM DEAT H FA++DQLIE
Sbjct: 223 DIIDIPKKEAVKSLLQNGQLEIVTGGWVMPDEATPHYFALIDQLIE 268
>sp|Q8BRK9|MA2A2_MOUSE Alpha-mannosidase 2x OS=Mus musculus GN=Man2a2 PE=2 SV=2
Length = 1152
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 4 VHPTKRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
+ KR V++L+ G+LE+ TGGWVM DEA SH FA+VDQLIE
Sbjct: 226 ISAQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALVDQLIE 269
>sp|P49641|MA2A2_HUMAN Alpha-mannosidase 2x OS=Homo sapiens GN=MAN2A2 PE=2 SV=3
Length = 1150
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 4 VHPTKRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
++ KR V++L+ G+LE+ TGGWVM DEA SH FA++DQLIE
Sbjct: 226 INVQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALIDQLIE 269
>sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3
Length = 999
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Query: 9 RNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL------IEETFST 52
+ IV++L+ +GRLE GGWVM DEAT+H A++DQ+ +EETF +
Sbjct: 137 QKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLRLRFLEETFGS 186
>sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2
SV=1
Length = 1012
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 9 RNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL------IEETFST 52
R +V+ L+ +GRLE GGWVM DEA +H A+VDQ+ +E+TF +
Sbjct: 137 REVVRDLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLGLRFLEDTFGS 186
>sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1
Length = 1007
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 9 RNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL------IEETFST 52
+ +V++L+ +GRLE GGWVM DEA +H A+VDQ+ +E+TF +
Sbjct: 134 QEVVRRLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLGLRFLEDTFGS 183
>sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3
Length = 1011
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Query: 9 RNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL------IEETF 50
+ +V+ L+ +GRLE GGWVM DEA +H A+VDQ+ +E+TF
Sbjct: 136 QEVVRDLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLGLRFLEDTF 183
>sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4
Length = 1013
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 9 RNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL------IEETFST 52
++ V+ L+ +GRLE V GGWVM DEA +H A+VDQ+ +++TF +
Sbjct: 136 QDAVRNLVRQGRLEFVNGGWVMNDEAATHYGAIVDQMTLGLRFLQDTFGS 185
>sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1
Length = 1007
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Query: 9 RNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL------IEETF 50
+ +V+ L+ +GRLE GGWVM DEA +H A++DQ+ +E+TF
Sbjct: 137 QEVVRDLVRQGRLEFANGGWVMNDEAATHYGAIIDQMTLGLRFLEDTF 184
>sp|Q24451|MAN2_DROME Alpha-mannosidase 2 OS=Drosophila melanogaster GN=alpha-Man-II PE=1
SV=2
Length = 1108
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 8 KRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
K+ +K ++ G+LE VTGGWVM DEA SH ++ QL E
Sbjct: 208 KKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTE 247
>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA
PE=1 SV=2
Length = 1010
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 7 TKRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL 45
T +NIVK L+ G+LE + GG+ M DEAT++ +DQ+
Sbjct: 113 TMQNIVKGLVESGQLEFINGGYCMNDEATTYYDDTIDQM 151
>sp|Q9Y2E5|MA2B2_HUMAN Epididymis-specific alpha-mannosidase OS=Homo sapiens GN=MAN2B2
PE=1 SV=4
Length = 1009
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 12 VKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIEE---TFSTFSVQ 56
V++L+ EGRLE V GG VM DEA +H+ + QL E + TF ++
Sbjct: 96 VRQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIR 143
>sp|O54782|MA2B2_MOUSE Epididymis-specific alpha-mannosidase OS=Mus musculus GN=Man2b2
PE=2 SV=2
Length = 1018
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 8 KRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
++ V++L+ EGRLE V GG VM DEA +H+ + QL E
Sbjct: 92 QKQQVRQLLHEGRLEFVLGGQVMHDEAVTHLDDQILQLTE 131
>sp|Q5RDJ3|MA2B2_PONAB Epididymis-specific alpha-mannosidase OS=Pongo abelii GN=MAN2B2
PE=2 SV=1
Length = 1009
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 8 KRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIEE---TFSTFSVQ 56
+++ V +L+ EGRLE V GG VM DEA +H+ + QL E + TF ++
Sbjct: 92 QKHQVHQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIR 143
>sp|Q28949|MA2B2_PIG Epididymis-specific alpha-mannosidase OS=Sus scrofa GN=MAN2B2 PE=1
SV=2
Length = 995
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 8 KRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIEE---TFSTFSVQ 56
++ V++L+AE RLE V GG VM DEA +H + QL E + TF ++
Sbjct: 92 RKQQVRQLLAEQRLEFVLGGQVMHDEAVTHFDDQILQLTEGHGFLYETFGIR 143
>sp|Q54YC4|MAND_DICDI Alpha-mannosidase D OS=Dictyostelium discoideum GN=manD PE=3 SV=1
Length = 1222
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 8 KRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQLIE 47
++ IV+ LI +L ++GGWV DEAT+ I ++ Q+ +
Sbjct: 126 QKEIVRNLINNKQLSFISGGWVQNDEATATIDDVITQMTQ 165
>sp|Q54KN4|MANF_DICDI Alpha-mannosidase F OS=Dictyostelium discoideum GN=manF PE=3 SV=1
Length = 994
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 9 RNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL 45
+N K + R+E V GGWVM DEA + + +++ QL
Sbjct: 93 KNDFIKHVKNDRIEFVNGGWVMNDEACASLESVIRQL 129
>sp|Q54YF7|MANB_DICDI Alpha-mannosidase B OS=Dictyostelium discoideum GN=manB PE=3 SV=1
Length = 1035
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 12 VKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL 45
V+ L+ G+L V GGW DE +H A+++Q+
Sbjct: 106 VRNLVNNGQLYFVGGGWAQNDEGATHYQAVINQM 139
>sp|Q55ER0|MANC_DICDI Alpha-mannosidase C OS=Dictyostelium discoideum GN=manC PE=3 SV=1
Length = 1079
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 7 TKRNIVKKLIAEGRLEMVTGGWVMTDEATSHIFAMVDQL 45
T +N VK+LI+ + V GGW DEA + A+++Q+
Sbjct: 98 TLQNQVKQLISNKQFYFVGGGWTQNDEAITDYQAVINQM 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,210,971
Number of Sequences: 539616
Number of extensions: 556011
Number of successful extensions: 1511
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1490
Number of HSP's gapped (non-prelim): 21
length of query: 62
length of database: 191,569,459
effective HSP length: 34
effective length of query: 28
effective length of database: 173,222,515
effective search space: 4850230420
effective search space used: 4850230420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)