Your job contains 1 sequence.
>psy4377
MCDKADCKKAKPAVQPPQPLSCASVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVN
ESILLGGGNNFADLQYLQDSV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4377
(81 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0250746 - symbol:Prosbeta7 "Proteasome beta7 subun... 155 4.7e-11 1
UNIPROTKB|P28024 - symbol:psmb4 "Proteasome subunit beta ... 146 3.3e-10 1
UNIPROTKB|D4A640 - symbol:Psmb4 "Proteasome subunit beta ... 141 1.0e-09 1
MGI|MGI:1098257 - symbol:Psmb4 "proteasome (prosome, macr... 142 1.4e-09 1
RGD|61877 - symbol:Psmb4 "proteasome (prosome, macropain)... 141 1.8e-09 1
UNIPROTKB|P34067 - symbol:Psmb4 "Proteasome subunit beta ... 141 1.8e-09 1
UNIPROTKB|Q29384 - symbol:PSMB4 "Proteasome subunit beta ... 136 2.9e-09 1
UNIPROTKB|Q3T108 - symbol:PSMB4 "Proteasome subunit beta ... 139 3.1e-09 1
UNIPROTKB|E2RBR6 - symbol:PSMB4 "Proteasome subunit beta ... 138 4.0e-09 1
UNIPROTKB|P28070 - symbol:PSMB4 "Proteasome subunit beta ... 136 6.8e-09 1
UNIPROTKB|F1ST02 - symbol:PSMB4 "Proteasome subunit beta ... 136 6.8e-09 1
ZFIN|ZDB-GENE-050417-333 - symbol:psmb4 "proteasome (pros... 135 8.0e-09 1
UNIPROTKB|H9L0U6 - symbol:PSMB4 "Proteasome subunit beta ... 126 8.6e-08 1
POMBASE|SPBC577.10 - symbol:SPBC577.10 "20S proteasome co... 118 7.1e-07 1
WB|WBGene00003953 - symbol:pbs-7 species:6239 "Caenorhabd... 106 1.2e-05 1
ASPGD|ASPL0000028212 - symbol:AN10708 species:162425 "Eme... 102 4.2e-05 1
CGD|CAL0000170 - symbol:orf19.4230 species:5476 "Candida ... 102 4.8e-05 1
SGD|S000001946 - symbol:PRE4 "Beta 7 subunit of the 20S p... 101 5.7e-05 1
DICTYBASE|DDB_G0273909 - symbol:psmB4-2 "20S proteasome s... 92 0.00053 1
DICTYBASE|DDB_G0273163 - symbol:psmB4-1 "proteasome subun... 92 0.00053 1
>FB|FBgn0250746 [details] [associations]
symbol:Prosbeta7 "Proteasome beta7 subunit" species:7227
"Drosophila melanogaster" [GO:0005839 "proteasome core complex"
evidence=ISS;NAS] [GO:0004175 "endopeptidase activity"
evidence=ISS;NAS] [GO:0006508 "proteolysis" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0051297 "centrosome organization" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR016295 InterPro:IPR023333
Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476
EMBL:AE014297 GO:GO:0005634 GO:GO:0005737 GO:GO:0022008
GO:GO:0051297 GO:GO:0008283 GO:GO:0006974 GO:GO:0000022
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
MEROPS:T01.987 KO:K02736 OMA:RIMRVND GeneTree:ENSGT00390000000698
EMBL:AY118936 RefSeq:NP_649529.1 RefSeq:NP_730922.1
UniGene:Dm.11642 ProteinModelPortal:Q9VNA5 SMR:Q9VNA5
DIP:DIP-19164N IntAct:Q9VNA5 MINT:MINT-924269 STRING:Q9VNA5
PaxDb:Q9VNA5 PRIDE:Q9VNA5 EnsemblMetazoa:FBtr0078805
EnsemblMetazoa:FBtr0078806 GeneID:40639 KEGG:dme:Dmel_CG12000
CTD:40639 FlyBase:FBgn0250746 InParanoid:Q9VNA5 OrthoDB:EOG4Q575B
PhylomeDB:Q9VNA5 GenomeRNAi:40639 NextBio:819792 Bgee:Q9VNA5
GermOnline:CG12000 Uniprot:Q9VNA5
Length = 268
Score = 155 (59.6 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 28/58 (48%), Positives = 46/58 (79%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQDSV 81
SV G+++D GV+LAAD+LVS+ +A + N +R+ KVN++ILLGG +FAD+Q ++ ++
Sbjct: 59 SVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNI 116
>UNIPROTKB|P28024 [details] [associations]
symbol:psmb4 "Proteasome subunit beta type-4" species:8355
"Xenopus laevis" [GO:0005839 "proteasome core complex"
evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
MEROPS:T01.987 HOVERGEN:HBG018194 EMBL:X62709 PIR:S17568
UniGene:Xl.4728 ProteinModelPortal:P28024 SMR:P28024 PRIDE:P28024
Xenbase:XB-GENE-6253413 Uniprot:P28024
Length = 242
Score = 146 (56.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQDSV 81
SV G++FD GV++AAD L S+ LA F N RI+KVNE+ +LG ++AD QYL+ +
Sbjct: 33 SVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQVI 90
>UNIPROTKB|D4A640 [details] [associations]
symbol:Psmb4 "Proteasome subunit beta type" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR016295
InterPro:IPR023333 Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854
PROSITE:PS51476 RGD:61877 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 EMBL:AC130969 IPI:IPI00949842
PRIDE:D4A640 Ensembl:ENSRNOT00000067192 ArrayExpress:D4A640
Uniprot:D4A640
Length = 232
Score = 141 (54.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++FD GV++AAD L S+ LA F N RI++VN+S +LG ++AD QYL+
Sbjct: 23 SVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLK 77
>MGI|MGI:1098257 [details] [associations]
symbol:Psmb4 "proteasome (prosome, macropain) subunit, beta
type 4" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0002862 "negative regulation of inflammatory
response to antigenic stimulus" evidence=IMP] [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 MGI:MGI:1098257
GO:GO:0005829 GO:GO:0005634 GO:GO:0002862 Reactome:REACT_102124
GO:GO:0001530 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 PDB:3UNB PDB:3UNE PDB:3UNF PDB:3UNH PDBsum:3UNB
PDBsum:3UNE PDBsum:3UNF PDBsum:3UNH MEROPS:T01.987 KO:K02736
OMA:RIMRVND CTD:5692 GeneTree:ENSGT00390000000698
HOVERGEN:HBG018194 OrthoDB:EOG4F1X3R ChiTaRS:PSMB4 EMBL:U65636
EMBL:AK077448 EMBL:AK137044 EMBL:AK156624 EMBL:AK168265
EMBL:AK168340 EMBL:BC008241 EMBL:M74556 IPI:IPI00129512
RefSeq:NP_032971.2 UniGene:Mm.368 ProteinModelPortal:P99026
SMR:P99026 IntAct:P99026 STRING:P99026 PhosphoSite:P99026
REPRODUCTION-2DPAGE:P99026 SWISS-2DPAGE:P99026 PaxDb:P99026
PRIDE:P99026 Ensembl:ENSMUST00000005923 GeneID:19172 KEGG:mmu:19172
UCSC:uc008qhe.2 InParanoid:P99026 NextBio:295846 Bgee:P99026
Genevestigator:P99026 GermOnline:ENSMUSG00000005779 Uniprot:P99026
Length = 264
Score = 142 (55.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++FD GV++AAD L S+ LA F N RI++VN+S +LG ++AD QYL+
Sbjct: 55 SVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLK 109
>RGD|61877 [details] [associations]
symbol:Psmb4 "proteasome (prosome, macropain) subunit, beta type
4" species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=IEA;ISO] [GO:0002862 "negative regulation of
inflammatory response to antigenic stimulus" evidence=IEA;ISO]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA;ISO;ISS] [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR016295 InterPro:IPR023333
Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476
RGD:61877 GO:GO:0005634 GO:GO:0005737 GO:GO:0002862 GO:GO:0001530
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
MEROPS:T01.987 HOGENOM:HOG000181719 KO:K02736 CTD:5692
HOVERGEN:HBG018194 OrthoDB:EOG4F1X3R EMBL:S82190 EMBL:L17127
IPI:IPI00191505 PIR:S09084 PIR:S32507 RefSeq:NP_113817.1
UniGene:Rn.6169 ProteinModelPortal:P34067 SMR:P34067 IntAct:P34067
STRING:P34067 PhosphoSite:P34067 World-2DPAGE:0004:P34067
PRIDE:P34067 GeneID:58854 KEGG:rno:58854 UCSC:RGD:61877
InParanoid:P34067 NextBio:611445 ArrayExpress:P34067
Genevestigator:P34067 GermOnline:ENSRNOG00000020979 Uniprot:P34067
Length = 263
Score = 141 (54.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++FD GV++AAD L S+ LA F N RI++VN+S +LG ++AD QYL+
Sbjct: 54 SVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLK 108
>UNIPROTKB|P34067 [details] [associations]
symbol:Psmb4 "Proteasome subunit beta type-4" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR016295
InterPro:IPR023333 Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854
PROSITE:PS51476 RGD:61877 GO:GO:0005634 GO:GO:0005737 GO:GO:0002862
GO:GO:0001530 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 MEROPS:T01.987 HOGENOM:HOG000181719 KO:K02736
CTD:5692 HOVERGEN:HBG018194 OrthoDB:EOG4F1X3R EMBL:S82190
EMBL:L17127 IPI:IPI00191505 PIR:S09084 PIR:S32507
RefSeq:NP_113817.1 UniGene:Rn.6169 ProteinModelPortal:P34067
SMR:P34067 IntAct:P34067 STRING:P34067 PhosphoSite:P34067
World-2DPAGE:0004:P34067 PRIDE:P34067 GeneID:58854 KEGG:rno:58854
UCSC:RGD:61877 InParanoid:P34067 NextBio:611445 ArrayExpress:P34067
Genevestigator:P34067 GermOnline:ENSRNOG00000020979 Uniprot:P34067
Length = 263
Score = 141 (54.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++FD GV++AAD L S+ LA F N RI++VN+S +LG ++AD QYL+
Sbjct: 54 SVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLK 108
>UNIPROTKB|Q29384 [details] [associations]
symbol:PSMB4 "Proteasome subunit beta type-4" species:9823
"Sus scrofa" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.987
HOGENOM:HOG000181719 HOVERGEN:HBG018194 OrthoDB:EOG4F1X3R
EMBL:F14598 ProteinModelPortal:Q29384 SMR:Q29384 STRING:Q29384
PRIDE:Q29384 Uniprot:Q29384
Length = 154
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++F+ GV++AAD L S+ LA F N RI++VN S +LG ++AD QYL+
Sbjct: 55 SVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLK 109
>UNIPROTKB|Q3T108 [details] [associations]
symbol:PSMB4 "Proteasome subunit beta type-4" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002862 "negative regulation of inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0001530
"lipopolysaccharide binding" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0002862 GO:GO:0001530 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 PDB:1IRU PDBsum:1IRU
MEROPS:T01.987 HOGENOM:HOG000181719 KO:K02736 OMA:RIMRVND
EMBL:BC102182 IPI:IPI00697757 RefSeq:NP_001029438.1
UniGene:Bt.53288 ProteinModelPortal:Q3T108 SMR:Q3T108 STRING:Q3T108
PRIDE:Q3T108 Ensembl:ENSBTAT00000028364 GeneID:506203
KEGG:bta:506203 CTD:5692 GeneTree:ENSGT00390000000698
HOVERGEN:HBG018194 InParanoid:Q3T108 OrthoDB:EOG4F1X3R
EvolutionaryTrace:Q3T108 NextBio:20867498 Uniprot:Q3T108
Length = 264
Score = 139 (54.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV GL+F+ GV++AAD L S+ LA F N RI++VN S +LG ++AD QYL+
Sbjct: 55 SVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLK 109
>UNIPROTKB|E2RBR6 [details] [associations]
symbol:PSMB4 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0002862 "negative regulation of
inflammatory response to antigenic stimulus" evidence=IEA]
[GO:0001530 "lipopolysaccharide binding" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0002862 GO:GO:0001530 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02736 OMA:RIMRVND CTD:5692
GeneTree:ENSGT00390000000698 EMBL:AAEX03011056 RefSeq:XP_533057.3
Ensembl:ENSCAFT00000020153 GeneID:475848 KEGG:cfa:475848
NextBio:20851613 Uniprot:E2RBR6
Length = 264
Score = 138 (53.6 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++F+ GV++AAD L S+ LA F N RI++VN+S +LG ++AD QYL+
Sbjct: 55 SVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLK 109
>UNIPROTKB|P28070 [details] [associations]
symbol:PSMB4 "Proteasome subunit beta type-4" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0001530 "lipopolysaccharide binding" evidence=IEA] [GO:0002862
"negative regulation of inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005839 "proteasome core complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0002862
GO:GO:0044281 GO:GO:0000082 GO:GO:0051436 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 EMBL:CH471121 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001530 Reactome:REACT_383
GO:GO:0005839 GO:GO:0004298 EMBL:AL589764 eggNOG:COG0638
MEROPS:T01.987 HOGENOM:HOG000181719 KO:K02736 OMA:RIMRVND CTD:5692
HOVERGEN:HBG018194 OrthoDB:EOG4F1X3R EMBL:D26600 EMBL:AK313825
EMBL:CR456820 EMBL:BT006917 EMBL:S71381 IPI:IPI00555956 PIR:S08186
PIR:S45719 PIR:S50147 RefSeq:NP_002787.2 UniGene:Hs.89545
ProteinModelPortal:P28070 SMR:P28070 IntAct:P28070
MINT:MINT-1192686 STRING:P28070 PhosphoSite:P28070 DMDM:116242733
DOSAC-COBS-2DPAGE:P28070 OGP:P28070 REPRODUCTION-2DPAGE:IPI00555956
SWISS-2DPAGE:P28070 PaxDb:P28070 PeptideAtlas:P28070 PRIDE:P28070
DNASU:5692 Ensembl:ENST00000290541 GeneID:5692 KEGG:hsa:5692
UCSC:uc001eyc.1 GeneCards:GC01P151372 HGNC:HGNC:9541 HPA:HPA006700
MIM:602177 neXtProt:NX_P28070 PharmGKB:PA33886 InParanoid:P28070
PhylomeDB:P28070 ChiTaRS:PSMB4 GenomeRNAi:5692 NextBio:22110
Bgee:P28070 CleanEx:HS_PSMB4 Genevestigator:P28070
GermOnline:ENSG00000159377 Uniprot:P28070
Length = 264
Score = 136 (52.9 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++F+ GV++AAD L S+ LA F N RI++VN S +LG ++AD QYL+
Sbjct: 55 SVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLK 109
>UNIPROTKB|F1ST02 [details] [associations]
symbol:PSMB4 "Proteasome subunit beta type" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0002862 "negative regulation of inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0001530
"lipopolysaccharide binding" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0002862 GO:GO:0001530 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02736 OMA:RIMRVND CTD:5692
GeneTree:ENSGT00390000000698 EMBL:CU179724 RefSeq:NP_001231384.1
UniGene:Ssc.53698 Ensembl:ENSSSCT00000007257 GeneID:100153923
KEGG:ssc:100153923 Uniprot:F1ST02
Length = 264
Score = 136 (52.9 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV G++F+ GV++AAD L S+ LA F N RI++VN S +LG ++AD QYL+
Sbjct: 55 SVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLK 109
>ZFIN|ZDB-GENE-050417-333 [details] [associations]
symbol:psmb4 "proteasome (prosome, macropain)
subunit, beta type, 4" species:7955 "Danio rerio" [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR016295
InterPro:IPR023333 Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854
PROSITE:PS51476 ZFIN:ZDB-GENE-050417-333 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
EMBL:BX571688 eggNOG:COG0638 HOGENOM:HOG000181719 OMA:RIMRVND
GeneTree:ENSGT00390000000698 HOVERGEN:HBG018194 OrthoDB:EOG4F1X3R
IPI:IPI00506848 UniGene:Dr.76312 SMR:A8E7N8
Ensembl:ENSDART00000131715 Uniprot:A8E7N8
Length = 256
Score = 135 (52.6 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQDSV 81
SV G++F GV++AAD L S+ LA F N R++KVN S +LG ++AD QYL+ +
Sbjct: 47 SVLGVKFKGGVIIAADMLGSYGSLARFRNISRLMKVNNSTILGASGDYADYQYLKQII 104
>UNIPROTKB|H9L0U6 [details] [associations]
symbol:PSMB4 "Proteasome subunit beta type" species:9031
"Gallus gallus" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001530 "lipopolysaccharide binding" evidence=IEA] [GO:0002862
"negative regulation of inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02736
OMA:RIMRVND CTD:5692 GeneTree:ENSGT00390000000698 EMBL:AADN02010469
RefSeq:XP_427542.3 Ensembl:ENSGALT00000029152 GeneID:429986
KEGG:gga:429986 Uniprot:H9L0U6
Length = 258
Score = 126 (49.4 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYL 77
SV G++F+ G+++AAD + S+ LA F + R+++VN+S +LG ++AD QYL
Sbjct: 49 SVLGVKFEGGIVIAADMMGSYGSLARFRSISRLLRVNDSTVLGASGDYADFQYL 102
>POMBASE|SPBC577.10 [details] [associations]
symbol:SPBC577.10 "20S proteasome complex subunit beta 7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476
PomBase:SPBC577.10 GO:GO:0005829 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GO:GO:0004298 eggNOG:COG0638
GO:GO:0019774 HOGENOM:HOG000181719 KO:K02736 OMA:RIMRVND
MEROPS:T01.A13 PIR:T40554 RefSeq:NP_595308.1
ProteinModelPortal:Q9USQ9 STRING:Q9USQ9 PRIDE:Q9USQ9
EnsemblFungi:SPBC577.10.1 GeneID:2540875 KEGG:spo:SPBC577.10
OrthoDB:EOG4V46HT NextBio:20801991 Uniprot:Q9USQ9
Length = 262
Score = 118 (46.6 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 23 ASVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
+SV L+F GV++AAD+L S+ LA F + +R+ KV ++ ++G G + +D Q +Q
Sbjct: 44 SSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQ 99
>WB|WBGene00003953 [details] [associations]
symbol:pbs-7 species:6239 "Caenorhabditis elegans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR001353 InterPro:IPR016295
InterPro:IPR023333 Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS51476
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0000003 GO:GO:0051603 EMBL:Z81079 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000181719 KO:K02736
OMA:RIMRVND GeneTree:ENSGT00390000000698 PIR:T22003
RefSeq:NP_492354.1 ProteinModelPortal:P90868 SMR:P90868
DIP:DIP-26967N IntAct:P90868 MINT:MINT-211920 STRING:P90868
MEROPS:T01.A08 PaxDb:P90868 EnsemblMetazoa:F39H11.5 GeneID:172674
KEGG:cel:CELE_F39H11.5 UCSC:F39H11.5.1 CTD:172674 WormBase:F39H11.5
InParanoid:P90868 NextBio:876521 Uniprot:P90868
Length = 236
Score = 106 (42.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQDSV 81
SV LQ+ GV++ D +VS+ +A + N R KVN+++L+ G + AD +LQ+ +
Sbjct: 19 SVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGGDHADFHWLQNVI 76
>ASPGD|ASPL0000028212 [details] [associations]
symbol:AN10708 species:162425 "Emericella nidulans"
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0019774 "proteasome core complex, beta-subunit
complex" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 EMBL:BN001305 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 OMA:RIMRVND EnsemblFungi:CADANIAT00003268
Uniprot:C8VFE6
Length = 260
Score = 102 (41.0 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYL 77
SV ++F+ GV +AAD+L S+ LA F + +R+ K ++ ++G + +D+QY+
Sbjct: 42 SVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVIGFSGDVSDMQYI 95
>CGD|CAL0000170 [details] [associations]
symbol:orf19.4230 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016295 InterPro:IPR023333
Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS51476 CGD:CAL0000170
EMBL:AACQ01000022 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 KO:K02736 RefSeq:XP_720540.1
ProteinModelPortal:Q5AGE9 SMR:Q5AGE9 STRING:Q5AGE9 GeneID:3637708
KEGG:cal:CaO19.4230 Uniprot:Q5AGE9
Length = 278
Score = 102 (41.0 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYL 77
SV +F GV++AAD + S+ L F N +R++KV + ++G + +DLQY+
Sbjct: 52 SVIASKFKNGVIMAADHVGSYGSLLRFNNIERLIKVGKETVVGISGDISDLQYI 105
>SGD|S000001946 [details] [associations]
symbol:PRE4 "Beta 7 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0003674
"molecular_function" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IC] [GO:0043248 "proteasome assembly" evidence=IGI]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 SGD:S000001946
GO:GO:0005634 GO:GO:0043161 GO:GO:0005789 EMBL:D50617 EMBL:BK006940
GO:GO:0043248 GO:GO:0010499 PDB:1VSY PDB:3L5Q PDBsum:1VSY
PDBsum:3L5Q GO:GO:0004298 GO:GO:0034515 PDB:4G4S PDBsum:4G4S
PDB:4B4T PDBsum:4B4T eggNOG:COG0638 PDB:1FNT PDB:1G0U PDB:1G65
PDB:1JD2 PDB:1RYP PDB:1Z7Q PDB:2F16 PDB:2FAK PDB:2GPL PDB:2ZCY
PDB:3BDM PDB:3D29 PDB:3DY3 PDB:3DY4 PDB:3E47 PDB:3GPJ PDB:3GPT
PDB:3GPW PDB:3HYE PDB:3MG0 PDB:3MG4 PDB:3MG6 PDB:3MG7 PDB:3MG8
PDB:3NZJ PDB:3NZW PDB:3NZX PDB:3OEU PDB:3OEV PDB:3OKJ PDB:3SDI
PDB:3SDK PDB:3SHJ PDB:3TDD PDB:3UN4 PDB:3UN8 PDB:4FZC PDB:4FZG
PDB:4GK7 PDBsum:1FNT PDBsum:1G0U PDBsum:1G65 PDBsum:1JD2
PDBsum:1RYP PDBsum:1Z7Q PDBsum:2F16 PDBsum:2FAK PDBsum:2GPL
PDBsum:2ZCY PDBsum:3BDM PDBsum:3D29 PDBsum:3DY3 PDBsum:3DY4
PDBsum:3E47 PDBsum:3GPJ PDBsum:3GPT PDBsum:3GPW PDBsum:3HYE
PDBsum:3MG0 PDBsum:3MG4 PDBsum:3MG6 PDBsum:3MG7 PDBsum:3MG8
PDBsum:3NZJ PDBsum:3NZW PDBsum:3NZX PDBsum:3OEU PDBsum:3OEV
PDBsum:3OKJ PDBsum:3SDI PDBsum:3SDK PDBsum:3SHJ PDBsum:3TDD
PDBsum:3UN4 PDBsum:3UN8 PDBsum:4FZC PDBsum:4FZG PDBsum:4GK7
GO:GO:0019774 MEROPS:T01.987 HOGENOM:HOG000181719 KO:K02736
OMA:RIMRVND GeneTree:ENSGT00390000000698 OrthoDB:EOG4V46HT
EMBL:X68663 EMBL:AY692947 PIR:A46610 RefSeq:NP_116708.1
ProteinModelPortal:P30657 SMR:P30657 DIP:DIP-2807N IntAct:P30657
MINT:MINT-592513 STRING:P30657 PaxDb:P30657 PeptideAtlas:P30657
EnsemblFungi:YFR050C GeneID:850611 KEGG:sce:YFR050C CYGD:YFR050c
EvolutionaryTrace:P30657 NextBio:966499 Genevestigator:P30657
GermOnline:YFR050C Uniprot:P30657
Length = 266
Score = 101 (40.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 17/55 (30%), Positives = 37/55 (67%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQ 78
SV +++D GV++AAD+L S+ L F +R++ V ++ ++G + +D+Q+++
Sbjct: 43 SVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIE 97
>DICTYBASE|DDB_G0273909 [details] [associations]
symbol:psmB4-2 "20S proteasome subunit alpha-4"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IPI] [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0005839 "proteasome
core complex" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0004175 "endopeptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR016295 InterPro:IPR023333
Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476
dictyBase:DDB_G0273909 dictyBase:DDB_G0273163 GO:GO:0005829
GO:GO:0005634 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0008233 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 KO:K02736 OMA:RIMRVND
RefSeq:XP_644571.1 RefSeq:XP_644680.1 ProteinModelPortal:Q556Q0
STRING:Q556Q0 MEROPS:T01.A13 PRIDE:Q556Q0
EnsemblProtists:DDB0232934 EnsemblProtists:DDB0266501
GeneID:8618774 GeneID:8619202 KEGG:ddi:DDB_G0273163
KEGG:ddi:DDB_G0273909 ProtClustDB:CLSZ2431215 Uniprot:Q556Q0
Length = 259
Score = 92 (37.4 bits), Expect = 0.00053, P = 0.00053
Identities = 16/58 (27%), Positives = 36/58 (62%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQDSV 81
SV +++D+GV++ +D L+S+ LA F + +R+ K ++G ++D Q + +++
Sbjct: 46 SVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIVGASGEYSDFQSITNTL 103
>DICTYBASE|DDB_G0273163 [details] [associations]
symbol:psmB4-1 "proteasome subunit beta type 4"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IPI] [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0005839 "proteasome
core complex" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0004175 "endopeptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR016295 InterPro:IPR023333
Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476
dictyBase:DDB_G0273909 dictyBase:DDB_G0273163 GO:GO:0005829
GO:GO:0005634 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0008233 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 KO:K02736 OMA:RIMRVND
RefSeq:XP_644571.1 RefSeq:XP_644680.1 ProteinModelPortal:Q556Q0
STRING:Q556Q0 MEROPS:T01.A13 PRIDE:Q556Q0
EnsemblProtists:DDB0232934 EnsemblProtists:DDB0266501
GeneID:8618774 GeneID:8619202 KEGG:ddi:DDB_G0273163
KEGG:ddi:DDB_G0273909 ProtClustDB:CLSZ2431215 Uniprot:Q556Q0
Length = 259
Score = 92 (37.4 bits), Expect = 0.00053, P = 0.00053
Identities = 16/58 (27%), Positives = 36/58 (62%)
Query: 24 SVFGLQFDRGVLLAADSLVSFEGLALFCNAQRIVKVNESILLGGGNNFADLQYLQDSV 81
SV +++D+GV++ +D L+S+ LA F + +R+ K ++G ++D Q + +++
Sbjct: 46 SVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIVGASGEYSDFQSITNTL 103
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.141 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 81 63 0.00091 102 3 11 22 0.49 27
29 0.42 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 381 (41 KB)
Total size of DFA: 66 KB (2061 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.51u 0.14s 7.65t Elapsed: 00:00:01
Total cpu time: 7.51u 0.14s 7.65t Elapsed: 00:00:01
Start: Thu Aug 15 14:33:25 2013 End: Thu Aug 15 14:33:26 2013