BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4378
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0II65|CCD70_BOVIN Coiled-coil domain-containing protein 70 OS=Bos taurus GN=CCDC70
PE=2 SV=1
Length = 222
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 29 MRQYEDNTL--VKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTL 86
MR + L +ED +E+ T KE+ + + + +E+ K+ KED
Sbjct: 65 MRAFRGEILGFWEEDRLFWEEEKTFWKEEKAFWEMEKSFREEEKAFWKKYRIFWKEDRAF 124
Query: 87 VKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 135
KEDN L + D L++ED L +E+ L E+ L++E+ L ++ TL
Sbjct: 125 WKEDNALWERDRNLLQEDKALWEEEKALWVEERALLEEEKVLWEDKKTL 173
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 51 LVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKE 110
+ED +E+ T KE+ + + + +E+ K+ KED KEDN L +
Sbjct: 75 FWEEDRLFWEEEKTFWKEEKAFWEMEKSFREEEKAFWKKYRIFWKEDRAFWKEDNALWER 134
Query: 111 DSTLVKEDNTLVKEDSTLVKEDNTLV 136
D L++ED L +E+ L E+ L+
Sbjct: 135 DRNLLQEDKALWEEEKALWVEERALL 160
>sp|Q9D9B0|CCD70_MOUSE Coiled-coil domain-containing protein 70 OS=Mus musculus GN=Ccdc70
PE=2 SV=1
Length = 223
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 37 LVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKE 96
KE+ T + + + +E+ T K+ T KED +EDN L + D L++ED L +E
Sbjct: 89 FWKEEKTFWEMEKSFREEEKTFWKKYRTFWKEDKAFWREDNALWERDRNLLQEDKALWEE 148
Query: 97 DSTLVKEDNTLVKEDSTLVKEDNTLV 122
+ L E+ L+ E+ L ++ +L
Sbjct: 149 EKALWVEERALLAEEKALWEDKKSLW 174
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 51 LVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKE 110
KE+ T + + + +E+ T K+ T KED +EDN L + D L++ED L +E
Sbjct: 89 FWKEEKTFWEMEKSFREEEKTFWKKYRTFWKEDKAFWREDNALWERDRNLLQEDKALWEE 148
Query: 111 DSTLVKEDNTLVKEDSTLVKEDNTLV 136
+ L E+ L+ E+ L ++ +L
Sbjct: 149 EKALWVEERALLAEEKALWEDKKSLW 174
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%)
Query: 44 LVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKE 103
KE+ T + + + +E+ T K+ T KED +ED+ L + D L++ED L +E
Sbjct: 89 FWKEEKTFWEMEKSFREEEKTFWKKYRTFWKEDKAFWREDNALWERDRNLLQEDKALWEE 148
Query: 104 DNTLVKEDSTLVKEDNTLVKEDSTLV 129
+ L E+ L+ E+ L ++ +L
Sbjct: 149 EKALWVEERALLAEEKALWEDKKSLW 174
>sp|Q6NSX1|CCD70_HUMAN Coiled-coil domain-containing protein 70 OS=Homo sapiens GN=CCDC70
PE=2 SV=1
Length = 233
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 36 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 95
T KE+ + + + + +E+ T K+ T KED KEDN L + D L++ED L +
Sbjct: 99 TFWKEEKSFWEMEKSFREEEKTFWKKYRTFWKEDKAFWKEDNALWERDRNLLQEDKALWE 158
Query: 96 EDSTLVKEDNTLVKEDSTLVKEDNT 120
E+ L E+ L++ + L ED T
Sbjct: 159 EEKALWVEERALLEGEKALW-EDKT 182
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 50 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 109
T KE+ + + + + +E+ T K+ T KED KEDN L + D L++ED L +
Sbjct: 99 TFWKEEKSFWEMEKSFREEEKTFWKKYRTFWKEDKAFWKEDNALWERDRNLLQEDKALWE 158
Query: 110 EDSTLVKEDNTLVKEDSTLVKEDNT 134
E+ L E+ L++ + L ED T
Sbjct: 159 EEKALWVEERALLEGEKALW-EDKT 182
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 64 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 123
T KE+ + + + + +E+ T K+ T KED KEDN L + D L++ED L +
Sbjct: 99 TFWKEEKSFWEMEKSFREEEKTFWKKYRTFWKEDKAFWKEDNALWERDRNLLQEDKALWE 158
Query: 124 EDSTLVKEDNTLV 136
E+ L E+ L+
Sbjct: 159 EEKALWVEERALL 171
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 43 TLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVK 102
T KE+ + + + + +E+ T K+ T KED KED+ L + D L++ED L +
Sbjct: 99 TFWKEEKSFWEMEKSFREEEKTFWKKYRTFWKEDKAFWKEDNALWERDRNLLQEDKALWE 158
Query: 103 EDNTLVKEDSTLVKEDNTLVKEDSTLV 129
E+ L E+ L++ + L ++ ++L
Sbjct: 159 EEKALWVEERALLEGEKALWEDKTSLW 185
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%)
Query: 33 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 92
E+ + + + + +E+ T K+ T KED KED+ L + D L++ED L +E+
Sbjct: 103 EEKSFWEMEKSFREEEKTFWKKYRTFWKEDKAFWKEDNALWERDRNLLQEDKALWEEEKA 162
Query: 93 LVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLV 136
L E+ L++ + L ++ ++L +E+N L +E+ E+N +
Sbjct: 163 LWVEERALLEGEKALWEDKTSLWEEENALWEEERAFWMENNGHI 206
>sp|Q4R9C9|CCD70_MACFA Coiled-coil domain-containing protein 70 OS=Macaca fascicularis
GN=CCDC70 PE=2 SV=1
Length = 232
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 36 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 95
+ KE+ + + + + +E+ T K+ K+D KEDN L ++D L++ED L +
Sbjct: 99 SFWKEEKSFWEMEKSFREEEKTFWKKYRIFWKDDKAFWKEDNALWEKDRNLLQEDKALWE 158
Query: 96 EDSTLVKEDNTLVKEDSTLVKEDNT 120
E+ L E+ L++E+ L ED T
Sbjct: 159 EEKALWVEERALLEEEKALW-EDKT 182
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 50 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 109
+ KE+ + + + + +E+ T K+ K+D KEDN L ++D L++ED L +
Sbjct: 99 SFWKEEKSFWEMEKSFREEEKTFWKKYRIFWKDDKAFWKEDNALWEKDRNLLQEDKALWE 158
Query: 110 EDSTLVKEDNTLVKEDSTLVKEDNT 134
E+ L E+ L++E+ L ED T
Sbjct: 159 EEKALWVEERALLEEEKALW-EDKT 182
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%)
Query: 43 TLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVK 102
+ KE+ + + + + +E+ T K+ K+D KED+ L ++D L++ED L +
Sbjct: 99 SFWKEEKSFWEMEKSFREEEKTFWKKYRIFWKDDKAFWKEDNALWEKDRNLLQEDKALWE 158
Query: 103 EDNTLVKEDSTLVKEDNTLVKEDSTLV 129
E+ L E+ L++E+ L ++ ++L
Sbjct: 159 EEKALWVEERALLEEEKALWEDKTSLW 185
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 64 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 123
+ KE+ + + + + +E+ T K+ K+D KEDN L ++D L++ED L +
Sbjct: 99 SFWKEEKSFWEMEKSFREEEKTFWKKYRIFWKDDKAFWKEDNALWEKDRNLLQEDKALWE 158
Query: 124 EDSTLVKEDNTLV 136
E+ L E+ L+
Sbjct: 159 EEKALWVEERALL 171
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 34 DNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 93
+ + +E+ T K+ K+D KEDN L ++D L++ED L +E+ L E+ L
Sbjct: 111 EKSFREEEKTFWKKYRIFWKDDKAFWKEDNALWEKDRNLLQEDKALWEEEKALWVEERAL 170
Query: 94 VKEDSTLVKEDNT 106
++E+ L ED T
Sbjct: 171 LEEEKALW-EDKT 182
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%)
Query: 33 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 92
E+ + + + + +E+ T K+ K+D KED+ L ++D L++ED L +E+
Sbjct: 103 EEKSFWEMEKSFREEEKTFWKKYRIFWKDDKAFWKEDNALWEKDRNLLQEDKALWEEEKA 162
Query: 93 LVKEDSTLVKEDNTLVKEDSTLV 115
L E+ L++E+ L ++ ++L
Sbjct: 163 LWVEERALLEEEKALWEDKTSLW 185
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 33 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 92
E+ T K+ K+D KED+ L ++D L++ED L +E+ L E+ L++E+
Sbjct: 117 EEKTFWKKYRIFWKDDKAFWKEDNALWEKDRNLLQEDKALWEEEKALWVEERALLEEEKA 176
Query: 93 LVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTL 128
L ++ ++L +E+N L +E+ E N + + L
Sbjct: 177 LWEDKTSLWEEENALWEEERAFWVESNGHIAREQML 212
>sp|Q5XHX6|TXND2_RAT Thioredoxin domain-containing protein 2 OS=Rattus norvegicus
GN=Txndc2 PE=1 SV=2
Length = 550
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 40 EDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDST 99
ED+ KE+ T+ ED+ KE+ T+ ED+ KE+ T+ ED+ KE+ T+ ED+
Sbjct: 339 EDTIQAKEEITVSPEDTIQAKEEITMSPEDTIQAKEEITVSPEDTIQAKEEITVSPEDTM 398
Query: 100 LVKEDNTLVKEDSTLVKEDNTLVKED 125
KE+ T+ ED+ +E + ED
Sbjct: 399 QSKEEITVSPEDTVQSQEGDIKSSED 424
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 54 EDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDST 113
ED+ KE+ T+ ED+ KE+ T+ ED+ KE+ T+ ED+ KE+ T+ ED+
Sbjct: 339 EDTIQAKEEITVSPEDTIQAKEEITMSPEDTIQAKEEITVSPEDTIQAKEEITVSPEDTM 398
Query: 114 LVKEDNTLVKEDSTLVKE 131
KE+ T+ ED+ +E
Sbjct: 399 QSKEEITVSPEDTVQSQE 416
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 20 STHANETKGMRQYEDNTLVKE-DSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 78
S E K + +D+ KE D + ED KE+ T+ ED KE+ T+ ED
Sbjct: 311 SAQPKEGKIHKPLKDSLPSKEGDISKPSEDTIQAKEEITVSPEDTIQAKEEITMSPEDTI 370
Query: 79 LVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKED 118
KE+ T+ ED KE+ T+ ED KE+ T+ ED
Sbjct: 371 QAKEEITVSPEDTIQAKEEITVSPEDTMQSKEEITVSPED 410
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 31 QYEDNTLVK--EDSTLVKEDNTLVK-EDSTLVKE-DNTLVKEDSTLVKEDNTLVKEDSTL 86
Q ++N + K +DS KE +DS KE D + ED+ KE+ T+ ED+
Sbjct: 298 QSKENKIPKSSQDSAQPKEGKIHKPLKDSLPSKEGDISKPSEDTIQAKEEITVSPEDTIQ 357
Query: 87 VKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 135
KE+ T+ ED+ KE+ T+ ED+ KE+ T+ ED+ KE+ T+
Sbjct: 358 AKEEITMSPEDTIQAKEEITVSPEDTIQAKEEITVSPEDTMQSKEEITV 406
>sp|Q96P66|GP101_HUMAN Probable G-protein coupled receptor 101 OS=Homo sapiens GN=GPR101
PE=2 SV=1
Length = 508
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 24 NETKGMRQYEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKED 83
+E++ RQ+E KE K+ + KE ST E +++ S V+E +T+ +
Sbjct: 258 DESEFRRQHEGEVKAKEGRMEAKDGSLKAKEGSTGTSE-SSVEARGSEEVRESSTVASDG 316
Query: 84 STLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDN 133
S KE +T V+E+S + T V + S + ED+ ED ED+
Sbjct: 317 SMEGKEGSTKVEENSMKADKGRTEVNQCSIDLGEDDMEFGEDDINFSEDD 366
>sp|P0CA12|PRIM_ASFM2 Putative helicase/primase complex protein OS=African swine fever
virus (isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-055 PE=3
SV=1
Length = 1102
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 38 VKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKED 97
+K+ +V N L +S+ KE+ + KE++ KE+ KE++ +KE+ + +KE+
Sbjct: 1012 IKQSPCVV--SNLLPITESSSTKEEISSTKEETYSTKEETYSTKEETCSIKEEISPIKEE 1069
Query: 98 STLVKEDNTLVKEDSTLVKEDNTLVKEDS 126
+ +KE+ + +KE++ +KE+ + +KE++
Sbjct: 1070 TCSIKEEISPIKEETCSIKEETSSIKEET 1098
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 50/79 (63%)
Query: 34 DNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 93
N L +S+ KE+ + KE++ KE+ KE++ +KE+ + +KE++ +KE+ +
Sbjct: 1020 SNLLPITESSSTKEEISSTKEETYSTKEETYSTKEETCSIKEEISPIKEETCSIKEEISP 1079
Query: 94 VKEDSTLVKEDNTLVKEDS 112
+KE++ +KE+ + +KE++
Sbjct: 1080 IKEETCSIKEETSSIKEET 1098
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%)
Query: 67 KEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDS 126
KE+ + KE+ KE++ KE+ +KE+ + +KE+ +KE+ + +KE+ +KE++
Sbjct: 1032 KEEISSTKEETYSTKEETYSTKEETCSIKEEISPIKEETCSIKEEISPIKEETCSIKEET 1091
Query: 127 TLVKED 132
+ +KE+
Sbjct: 1092 SSIKEE 1097
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 52 VKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKED 111
+K+ +V N L +S+ KE+ + KE++ KE+ KE++ +KE+ + +KE+
Sbjct: 1012 IKQSPCVV--SNLLPITESSSTKEEISSTKEETYSTKEETYSTKEETCSIKEEISPIKEE 1069
Query: 112 STLVKEDNTLVKEDSTLVKED 132
+ +KE+ + +KE++ +KE+
Sbjct: 1070 TCSIKEEISPIKEETCSIKEE 1090
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 30/44 (68%)
Query: 33 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKED 76
E+ +KE+ + +KE+ +KE+ + +KE+ +KE+++ +KE+
Sbjct: 1054 EETCSIKEEISPIKEETCSIKEEISPIKEETCSIKEETSSIKEE 1097
>sp|P0CAH7|VF475_ASFK5 Uncharacterized protein B475L OS=African swine fever virus (isolate
Pig/Kenya/KEN-50/1950) GN=Ken-089 PE=3 SV=1
Length = 480
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 33 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 92
+DN ++ED +DN ++ED +DN ++ED +DN ++ED + +DN
Sbjct: 359 QDNPEIEEDILEFNQDNPEIEEDILEFNQDNPEIEEDILKFNQDNPEIEEDILKLNQDNP 418
Query: 93 LVKEDSTLVKEDNTLVKEDSTLVK 116
++E+ L KE++ KED +V+
Sbjct: 419 EIEEEVILEKENH---KEDEPIVQ 439
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 47 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 106
+DN ++ED +DN ++ED +DN ++ED +DN ++ED + +DN
Sbjct: 359 QDNPEIEEDILEFNQDNPEIEEDILEFNQDNPEIEEDILKFNQDNPEIEEDILKLNQDNP 418
Query: 107 LVKEDSTLVKEDNTLVKEDSTLVK 130
++E+ L KE++ KED +V+
Sbjct: 419 EIEEEVILEKENH---KEDEPIVQ 439
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 61 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 120
+DN ++ED +DN ++ED +DN ++ED +DN ++ED + +DN
Sbjct: 359 QDNPEIEEDILEFNQDNPEIEEDILEFNQDNPEIEEDILKFNQDNPEIEEDILKLNQDNP 418
Query: 121 LVKEDSTLVKEDN 133
++E+ L KE++
Sbjct: 419 EIEEEVILEKENH 431
>sp|Q6ZQQ6|WDR87_HUMAN WD repeat-containing protein 87 OS=Homo sapiens GN=WDR87 PE=1 SV=3
Length = 2873
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 34 DNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 93
+ L E+ L+ ED L E+S + K + V+ L K L+K+ +L
Sbjct: 2007 ERKLSLEEKILLHEDRILAMEESEIAKGKLEFTRGQRIFVQGQRKLAKASRKLIKKRESL 2066
Query: 94 VKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 135
KE + L N ++K L +++ L +E+ + K L
Sbjct: 2067 SKEPAKL----NKILKALQKLTRDERKLTQEEIKMTKMKRAL 2104
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 32 YEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDN 91
+ED L E+S + K + V+ L K L+K+ +L KE + L N
Sbjct: 2019 HEDRILAMEESEIAKGKLEFTRGQRIFVQGQRKLAKASRKLIKKRESLSKEPAKL----N 2074
Query: 92 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 135
++K L +++ L +E+ + K L ++ L E + L
Sbjct: 2075 KILKALQKLTRDERKLTQEEIKMTKMKRALFVKERRLSIEQSKL 2118
>sp|Q03R31|RNY1_LACBA Ribonuclease Y 1 OS=Lactobacillus brevis (strain ATCC 367 / JCM
1170) GN=rny1 PE=3 SV=1
Length = 519
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 19 VSTHANETKGMRQYEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVK---E 75
V T E + Q +++ L++ + TL ++DN+L K +++L + D L E+ LVK +
Sbjct: 72 VETELKERRAEVQKQEDRLIQREETLDRKDNSLEKRENSLNRRDKKLSAEEQNLVKKQQQ 131
Query: 76 DNTLVKEDSTLVKEDNTLVKEDST--LVKEDNT-LVKEDSTLVKE 117
++L+++ V+ L ++D+ ++ E T L E + ++KE
Sbjct: 132 ADSLIEKRQAAVEAVAALSQDDARELIISEAKTALASERAKMIKE 176
>sp|P0C6Y7|PRDM9_RAT Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus
GN=Prdm9 PE=3 SV=1
Length = 796
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
Query: 19 VSTHANETKGMRQY---EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKE 75
VS H G + Y E + S L+K T +E + +E + S L+K
Sbjct: 533 VSEHQRTHTGEKPYICRECGRGFSQKSDLIKHQRTHTEEKPYICRECGRGFTQKSDLIKH 592
Query: 76 DNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 134
T +E + +E + S L+K T E + +E + S L+K T
Sbjct: 593 QRTHTEEKPYICRECGRGFTQKSDLIKHQRTHTGEKPYICRECGRGFTQKSDLIKHQRT 651
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 40 EDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDST 99
+ S L+K T +E + +E + S L+K T E + +E + S
Sbjct: 585 QKSDLIKHQRTHTEEKPYICRECGRGFTQKSDLIKHQRTHTGEKPYICRECGRGFTQKSD 644
Query: 100 LVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 134
L+K T +E + +E + S+L++ T
Sbjct: 645 LIKHQRTHTEEKPYICRECGRGFTQKSSLIRHQRT 679
Score = 28.9 bits (63), Expect = 8.7, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 27 KGMRQYEDNTLVKEDSTLVKEDNTLVKE-------DSTLVKEDNTLVKEDSTLVKEDNTL 79
+G Q D L+K T +E + +E S L+K T +E + +E
Sbjct: 553 RGFSQKSD--LIKHQRTHTEEKPYICRECGRGFTQKSDLIKHQRTHTEEKPYICRECGRG 610
Query: 80 VKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKE 131
+ S L+K T E + +E + S L+K T +E + +E
Sbjct: 611 FTQKSDLIKHQRTHTGEKPYICRECGRGFTQKSDLIKHQRTHTEEKPYICRE 662
>sp|Q9QYR6|MAP1A_MOUSE Microtubule-associated protein 1A OS=Mus musculus GN=Map1a PE=1 SV=2
Length = 2776
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 33 EDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNT 92
ED +++ L ++ TL ++D L E LV+ DS + ++D L +E+ ++D T
Sbjct: 1334 EDRATEQKEKELERKSETLQQKDQIL-SEKAALVQRDSVMHQKDEALDEENKPGGQQDKT 1392
Query: 93 LVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL 135
++ L K+D T V+ + L ED L ++D L
Sbjct: 1393 SEQKGRDLDKKD-TAVELGKGPEPKGKDLYLEDQGLAEKDKAL 1434
>sp|Q9Y7S2|YQO3_SCHPO UPF0612 protein C569.003 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC569.03 PE=3 SV=2
Length = 375
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 9 IDDVNTEYTLVSTHANETKGMRQYEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKE 68
D + TE +++ KG + +K + T++K D +K + +K + ++K
Sbjct: 126 FDAMQTEMSVMKNGIASIKG-----EMAEMKGEMTVMKNDIASIKGEMAEMKGEMAVMKN 180
Query: 69 DSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTL 128
D +K + +K + T++K D +K + +K + T++K D VK + T +K + T
Sbjct: 181 DIASIKGEMAEMKGEMTVMKNDIASIKGEMAEMKGEMTIMKSDIDSVKGETTTLKGEVTA 240
Query: 129 VK 130
+K
Sbjct: 241 MK 242
>sp|Q042C3|RNY_LACGA Ribonuclease Y OS=Lactobacillus gasseri (strain ATCC 33323 / DSM
20243) GN=rny PE=3 SV=1
Length = 540
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 25 ETKGMRQYEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDS 84
E R+ DN L + + +++N L++ + + +D+ L ++DS L +++N + K +
Sbjct: 85 EIHHYRERVDNELNERRQEVSRQENRLLQREDAIDHKDSLLDQKDSQLTQKENQIKKLQA 144
Query: 85 TLV---KEDNTLVKEDSTLVKEDNTLVKEDS---TLVKEDNTLVKEDSTLVKEDNTLV 136
++ K + LV E + E L +ED+ L K + LVKE + +++E N L
Sbjct: 145 QVLEKEKRADQLVTEREQKLYEVAELSQEDAKKIVLDKLSDQLVKERAEMIEESNQLA 202
>sp|Q74KB1|RNY_LACJO Ribonuclease Y OS=Lactobacillus johnsonii (strain CNCM I-12250 /
La1 / NCC 533) GN=rny PE=3 SV=1
Length = 540
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 25 ETKGMRQYEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDS 84
E R+ DN L + + +++N L++ + + +D+ L ++DS L +++N + K +
Sbjct: 85 EIHHYRERVDNELNERRQEVSRQENRLLQREDAIDHKDSLLDQKDSQLTQKENQIKKLQA 144
Query: 85 TLVKEDNT---LVKEDSTLVKEDNTLVKEDS---TLVKEDNTLVKEDSTLVKEDNTLV 136
+++++N LV E + E L +ED+ L K + LVKE + +++E N L
Sbjct: 145 QVLEKENRADQLVTEREKKLYEVAELNQEDAKKIVLDKLSDQLVKERAEMIEESNQLA 202
>sp|P83436|COG7_HUMAN Conserved oligomeric Golgi complex subunit 7 OS=Homo sapiens
GN=COG7 PE=1 SV=1
Length = 770
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 36 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 95
TLV + ++E N V+E S ++ V D +K++ + +KE LVKED +
Sbjct: 39 TLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFE 98
Query: 96 EDST 99
+D++
Sbjct: 99 QDTS 102
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 50 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 109
TLV + ++E N V+E S ++ V D +K++ + +KE LVKED +
Sbjct: 39 TLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFE 98
Query: 110 EDST 113
+D++
Sbjct: 99 QDTS 102
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 64 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 123
TLV + ++E N V+E S ++ V D +K++ + +KE LVKED +
Sbjct: 39 TLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFE 98
Query: 124 EDST 127
+D++
Sbjct: 99 QDTS 102
>sp|A2VDR8|COG7_BOVIN Conserved oligomeric Golgi complex subunit 7 OS=Bos taurus GN=COG7
PE=2 SV=1
Length = 770
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 36 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 95
TLV + ++E N V+E S ++ V D +K++ + +KE LVKED +
Sbjct: 39 TLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFE 98
Query: 96 EDST 99
+D++
Sbjct: 99 QDTS 102
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 50 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 109
TLV + ++E N V+E S ++ V D +K++ + +KE LVKED +
Sbjct: 39 TLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFE 98
Query: 110 EDST 113
+D++
Sbjct: 99 QDTS 102
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 64 TLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVK 123
TLV + ++E N V+E S ++ V D +K++ + +KE LVKED +
Sbjct: 39 TLVMKLQLFIQEVNHAVEETSHQALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFE 98
Query: 124 EDST 127
+D++
Sbjct: 99 QDTS 102
>sp|O61309|NOS_LYMST Nitric oxide synthase OS=Lymnaea stagnalis GN=NOS PE=2 SV=1
Length = 1153
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 48/85 (56%)
Query: 30 RQYEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKE 89
R + L + ++T+ +NT++ ++T+ +N++ ++T+ +NT+ ++T+
Sbjct: 923 RSFWQQRLGEIENTMPSCENTMLSCETTIPSCENSMPSCENTMPSCENTMPSCENTIPSC 982
Query: 90 DNTLVKEDSTLVKEDNTLVKEDSTL 114
+NT+ ++T+ +NT+ + T+
Sbjct: 983 ENTIPSCENTMPSCENTIPSWERTM 1007
>sp|Q49Y42|Y1157_STAS1 UPF0271 protein SSP1157 OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1157
PE=3 SV=1
Length = 252
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 23 ANETKGMRQYEDNTLVKEDSTLV--KEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTL- 79
A+E R+YED D LV KE + L+ +K+ +VK + K +NT+
Sbjct: 161 ASEVFADRRYED------DGQLVSRKEADALITNTDEAIKQVINMVKFQKVITKNNNTID 214
Query: 80 VKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVK 116
+K D+ V D E T ++E L KE ++ +
Sbjct: 215 IKADTICVHGDGAHAIEFVTQIREQ--LTKEGISITR 249
>sp|P28877|PMA1_CANAX Plasma membrane ATPase 1 OS=Candida albicans GN=PMA1 PE=1 SV=1
Length = 895
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 29 MRQYEDNTLVKE------DSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKE 82
+++Y+ ++V E +S LV + LV+ + V + L ED T++ D +V E
Sbjct: 137 IQEYQAGSIVDELKKTLANSALVVRNGQLVEIPANEVVPGDILQLEDGTVIPTDGRIVSE 196
Query: 83 DSTLVKEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLV---KEDSTLVKEDNTLV 136
D L + + + E + K ST+ + ++ DST V LV
Sbjct: 197 DCLLQVDQSAITGESLAVDKRSGDSCYSSSTVKTGEAFMIVTATGDSTFVGRAAALV 253
>sp|A7GRA8|RNY_BACCN Ribonuclease Y OS=Bacillus cereus subsp. cytotoxis (strain NVH
391-98) GN=rny PE=3 SV=1
Length = 520
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 31 QYEDNTLVKEDSTLVKEDNTLVKEDSTLVKEDNTLVKEDST---LVKEDNTLVKEDSTLV 87
Q ++N L++++ L ++D TL K + L K++ +LV L + LV++ T +
Sbjct: 85 QKQENRLMQKEENLDRKDETLDKREQMLEKKEESLVARQQQIEELESKVGELVQKQQTEL 144
Query: 88 KEDNTLVKEDS---TLVKEDNTLVKEDSTLVKEDNTLVKEDS 126
+ + L +E + L K +N L E + +VKE KE++
Sbjct: 145 ERISNLTREQAKSIILGKVENELSHEIAAMVKESEVRAKEEA 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.299 0.121 0.301
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,501,857
Number of Sequences: 539616
Number of extensions: 1961370
Number of successful extensions: 9891
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 7916
Number of HSP's gapped (non-prelim): 1277
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 55 (25.8 bits)