Query psy4382
Match_columns 258
No_of_seqs 122 out of 194
Neff 4.6
Searched_HMMs 29240
Date Sat Aug 17 00:06:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4382.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4382hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3isy_A Bsupi, intracellular pr 92.7 0.81 2.8E-05 36.8 9.5 77 15-93 16-101 (120)
2 2qsv_A Uncharacterized protein 91.9 1 3.6E-05 38.4 9.8 72 12-97 130-206 (220)
3 2qsv_A Uncharacterized protein 90.3 1.7 5.8E-05 37.0 9.6 75 12-97 14-88 (220)
4 2e6j_A Hydin protein; PAPD, st 84.9 8 0.00027 28.7 9.4 73 12-94 21-93 (112)
5 2ys4_A Hydrocephalus-inducing 81.3 5 0.00017 30.8 7.1 68 13-95 37-104 (122)
6 1so9_A Cytochrome C oxidase as 71.7 2.4 8.4E-05 35.9 3.0 95 8-125 53-148 (164)
7 2dj4_A Filamin-B; beta-sandwic 71.1 13 0.00045 28.0 6.9 87 6-139 18-104 (108)
8 3idu_A Uncharacterized protein 69.0 42 0.0014 26.7 11.2 66 12-93 28-96 (127)
9 2dmb_A Filamin-B; beta-sandwic 68.0 16 0.00056 28.5 7.0 73 6-98 18-90 (124)
10 1yew_A Particulate methane mon 65.8 12 0.0004 35.6 6.5 63 14-76 261-334 (382)
11 2xzz_A Protein-glutamine gamma 63.8 41 0.0014 25.7 8.3 67 14-93 17-85 (102)
12 2d7m_A Filamin-C; beta-sandwic 62.1 34 0.0011 26.0 7.6 80 13-139 26-105 (115)
13 2dia_A Filamin-B; beta-sandwic 61.7 22 0.00075 26.9 6.4 80 14-140 25-104 (113)
14 2l0d_A Cell surface protein; s 60.7 58 0.002 25.4 10.1 66 12-93 14-84 (114)
15 4b7l_A Filamin-B; structural p 60.0 22 0.00074 32.7 7.2 71 5-91 260-331 (347)
16 3cfu_A Uncharacterized lipopro 58.6 32 0.0011 28.2 7.3 67 13-79 42-113 (159)
17 1ex0_A Coagulation factor XIII 58.6 1.7E+02 0.0057 30.0 14.8 141 12-168 526-675 (731)
18 1suj_A CONE arrestin; sensory 58.5 16 0.00054 34.7 6.1 85 13-99 205-294 (392)
19 1g0d_A Protein-glutamine gamma 57.9 1.4E+02 0.0048 30.4 13.1 138 15-168 484-630 (695)
20 2q3z_A Transglutaminase 2; tra 56.0 1.8E+02 0.0061 29.6 14.6 141 12-168 482-632 (687)
21 3rfr_A PMOB; membrane, oxidore 55.8 18 0.00062 34.7 6.0 60 14-76 295-366 (419)
22 1vjj_A Protein-glutamine gluta 55.3 1.8E+02 0.0063 29.5 14.3 131 13-159 492-631 (692)
23 3rgh_A Filamin-A; cell adhesio 55.2 26 0.00088 26.1 5.7 53 13-80 21-73 (100)
24 3cnk_A Filamin-A; FLNA24, X-RA 55.0 43 0.0015 24.0 6.8 25 14-38 13-37 (89)
25 4hci_A Cupredoxin 1; structura 53.9 27 0.00093 25.4 5.6 47 10-76 29-75 (100)
26 3qbt_B Inositol polyphosphate 53.3 68 0.0023 25.4 8.3 64 13-80 39-102 (140)
27 2bp3_A Filamin A; structural p 53.1 23 0.00078 26.0 5.1 51 13-80 19-69 (97)
28 2e9j_A Filamin-B; beta-sandwic 52.3 20 0.00069 27.5 4.8 53 13-80 36-88 (119)
29 2k9u_A Gamma filamin; cytoskel 51.4 52 0.0018 25.1 7.1 81 14-143 32-112 (119)
30 1w8o_A Bacterial sialidase; 3D 49.5 64 0.0022 30.5 8.8 76 9-93 365-440 (601)
31 2ds4_A Tripartite motif protei 48.5 49 0.0017 24.4 6.4 82 12-138 23-111 (113)
32 2x3c_A Toxic extracellular end 48.0 23 0.00078 32.7 5.3 80 10-91 25-125 (343)
33 2eea_A Filamin-B; beta-sandwic 44.6 71 0.0024 24.1 6.9 60 14-93 35-94 (115)
34 1v05_A Filamin C; actin-bindin 44.1 42 0.0014 24.4 5.3 24 14-37 20-43 (96)
35 2dlg_A Filamin-B; beta-sandwic 43.4 17 0.00059 27.6 3.1 81 12-139 12-92 (102)
36 2w0p_A Filamin-A; alternative 42.8 54 0.0019 23.8 5.7 50 14-80 17-66 (94)
37 2d7p_A Filamin-C; beta-sandwic 41.5 83 0.0028 24.0 6.8 54 11-80 22-75 (112)
38 3lso_A Putative membrane ancho 37.8 89 0.003 30.2 7.6 75 16-92 245-343 (489)
39 2dmc_A Filamin-B; beta-sandwic 37.0 22 0.00074 27.6 2.8 54 12-80 26-79 (116)
40 2k6w_A Putative uncharacterize 36.8 92 0.0031 24.4 6.5 57 17-73 14-78 (120)
41 2ee6_A Filamin-B; beta-sandwic 34.7 94 0.0032 23.0 6.0 50 14-80 25-74 (105)
42 2di9_A Filamin-B; beta-sandwic 34.5 91 0.0031 24.2 6.2 77 14-139 45-121 (131)
43 2e9g_A AP-1 complex subunit ga 34.3 1.7E+02 0.0057 23.0 8.8 76 17-99 38-113 (131)
44 2di8_A Filamin-B; beta-sandwic 34.2 74 0.0025 24.1 5.5 62 14-97 25-86 (111)
45 1xvs_A Protein APAG; MCSG APC2 34.0 1.3E+02 0.0046 23.9 7.1 55 20-76 31-85 (126)
46 1g0d_A Protein-glutamine gamma 32.4 1.9E+02 0.0065 29.5 9.4 68 14-93 596-665 (695)
47 1rkl_A Dolichyl-diphosphooligo 32.4 50 0.0017 21.4 3.4 27 167-194 4-30 (36)
48 2f1e_A Protein APAG; APAG prot 32.1 1.5E+02 0.0051 23.6 7.1 54 20-75 32-85 (127)
49 1xq4_A Protein APAG; all beta 31.7 1.6E+02 0.0054 23.9 7.3 55 20-76 36-90 (139)
50 2d7o_A Filamin-C; beta-sandwic 31.0 43 0.0015 25.4 3.6 60 14-95 25-84 (111)
51 1tza_A APAG protein, SOR45; st 30.9 1.4E+02 0.0049 24.0 6.9 55 20-76 31-85 (134)
52 1iby_A Nitrosocyanin; RED copp 29.5 1.2E+02 0.0041 22.2 5.8 21 9-31 38-58 (112)
53 2r5o_A Putative ATP binding co 29.3 2.3E+02 0.0078 23.0 9.7 86 6-95 59-147 (188)
54 1gyu_A Adapter-related protein 28.5 2.3E+02 0.0077 22.6 9.5 38 61-99 85-122 (140)
55 1ex0_A Coagulation factor XIII 27.9 2.4E+02 0.0083 28.9 9.3 67 14-93 641-709 (731)
56 2l8s_A Integrin alpha-1; trans 27.3 62 0.0021 22.6 3.5 22 168-189 4-25 (54)
57 1g4m_A Beta-arrestin1; sensory 27.3 1.2E+02 0.004 28.4 6.5 86 12-99 207-297 (393)
58 2dic_A Filamin-B; beta-sandwic 26.7 94 0.0032 23.1 4.8 25 13-37 24-48 (105)
59 2k7p_A Filamin-A; IG-like, ABP 26.5 1.3E+02 0.0043 24.7 6.0 24 14-37 111-134 (188)
60 3zyz_A Beta-D-glucoside glucoh 25.6 1.7E+02 0.0059 29.4 7.8 59 16-80 612-675 (713)
61 1sdd_B Coagulation factor V; c 24.8 44 0.0015 32.6 3.3 69 8-80 68-137 (647)
62 2x41_A Beta-glucosidase; hydro 24.3 2.3E+02 0.0078 28.4 8.4 60 15-80 613-678 (721)
63 1wlh_A Gelation factor; ABP-12 24.2 1.9E+02 0.0065 25.1 7.0 27 12-38 17-50 (311)
64 2cal_A Rusticyanin; iron respi 22.2 2.2E+02 0.0076 22.6 6.5 64 9-78 61-128 (154)
65 2knc_A Integrin alpha-IIB; tra 21.8 90 0.0031 21.7 3.5 20 170-189 9-28 (54)
66 1iu1_A Gamma1-adaptin; coated 21.5 3.1E+02 0.011 21.9 9.2 74 19-99 55-128 (146)
67 3ugu_A S-arrestin; arrestin fo 20.6 3.2E+02 0.011 25.8 8.1 85 13-99 224-313 (380)
68 1exg_A EXO-1,4-beta-D-glycanas 20.6 2.8E+02 0.0096 21.0 6.6 64 10-77 14-89 (110)
69 2kut_A Uncharacterized protein 20.5 98 0.0033 24.6 3.9 75 12-93 11-92 (122)
70 2k7q_A Filamin-A; IG-like, ABP 20.2 1.6E+02 0.0055 23.9 5.4 24 14-37 111-134 (191)
No 1
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=92.73 E-value=0.81 Score=36.82 Aligned_cols=77 Identities=10% Similarity=0.119 Sum_probs=53.6
Q ss_pred CCceEEEEEEEEeCCCCcEEEEEEeeeeeccc--c-cceEEE------ecceeeeceeecCCceeEEEEEEeeCcccCCc
Q psy4382 15 AGSVVEFLVGFTNKGKQDFTLDTLDASLRYPM--D-FNFYIQ------NFSTIIYNRIVKPGHEATLGYSFVPAEAVAGR 85 (258)
Q Consensus 15 ~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~--d-~~~~iq------NfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~ 85 (258)
.|+.+++.+.++|.++.++++..-+|..-+-. | -+..|- =||...-...++||++.++.-.+- ...+|+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~--~~~~pG 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWK--EVPEPG 93 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEES--SCCCSE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeC--CCCCCc
Confidence 78899999999999999999988777652211 0 011221 244433458899999999998885 345667
Q ss_pred ceeEEEEE
Q psy4382 86 PFGLSVNL 93 (258)
Q Consensus 86 p~~L~l~l 93 (258)
.|-|..-+
T Consensus 94 ~Ytl~a~l 101 (120)
T 3isy_A 94 TYEVKVTF 101 (120)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEE
Confidence 77666555
No 2
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=91.90 E-value=1 Score=38.40 Aligned_cols=72 Identities=17% Similarity=0.247 Sum_probs=53.4
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeec-eeecCCceeEEEEEEeeCcccCCcc----
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYN-RIVKPGHEATLGYSFVPAEAVAGRP---- 86 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~-~~V~pg~~at~~Y~F~p~~~~~~~p---- 86 (258)
.+. |+..+..+.|+|.|+.++.|..+..|= . -|+..+. ..+.||++.++...|.|... ++.
T Consensus 130 ~i~-g~~~~~~f~i~N~G~~pL~I~~v~~sc------g-----ct~~~~~~~~i~PGe~~~i~v~~~~~~~--~g~~~~~ 195 (220)
T 2qsv_A 130 QLD-GETTKAAIEIRNVGAGPLRLHSVTTRN------P-----ALTAVPDRTEIKPGGSTLLRIAVDPQVM--KAEGWQS 195 (220)
T ss_dssp ECT-TSCEEEEEEEEECSSSCEEEEEEEECS------T-----TEEEEESCSEECTTCEEEEEEEECHHHH--HHTTCSE
T ss_pred ccC-CCeEEEEEEEEECCCCCEEEEEEEeCC------C-----CEeeecCCccCCCCCEEEEEEEEecCCC--CCcccce
Confidence 466 999999999999999999999887642 1 2333343 68999999999999988752 234
Q ss_pred eeEEEEEEEee
Q psy4382 87 FGLSVNLQYRD 97 (258)
Q Consensus 87 ~~L~l~l~Y~~ 97 (258)
|.-.|.+.-.|
T Consensus 196 ~~~~i~v~~N~ 206 (220)
T 2qsv_A 196 IAADISIICND 206 (220)
T ss_dssp EEEEEEEEESC
T ss_pred eccEEEEEECC
Confidence 66666663333
No 3
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=90.32 E-value=1.7 Score=37.04 Aligned_cols=75 Identities=9% Similarity=-0.043 Sum_probs=54.6
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEE
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSV 91 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l 91 (258)
++..|+.....+.|+|.|+.++++..+. -|.. +++......|.||++..+...|-+.......++.=.|
T Consensus 14 ~v~~g~~~~~~~~i~N~g~~pl~i~~~~----~p~~-------~~~~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~i 82 (220)
T 2qsv_A 14 ISMPEDEGVVRLVVNNTDESDLQVAVVS----LPSF-------VSLDDRAFRLQAREPRELNLSLAVPRNMPPGMKDEPL 82 (220)
T ss_dssp SBCTTCCCEEEEEEEECSSSCEEEEEEE----CCTT-------EECSCCEEEECSSSCEEEEEEECCCTTCCSEEEEEEE
T ss_pred cccCCCcceEEEEEEeCCCCceEEEecc----CCCc-------eEeeeCcceeCCCCceEEEEEEcchhcccCCceeeEE
Confidence 5678999999999999999999998763 2322 2332345889999999999999888754444454455
Q ss_pred EEEEee
Q psy4382 92 NLQYRD 97 (258)
Q Consensus 92 ~l~Y~~ 97 (258)
.|...+
T Consensus 83 ~v~~~~ 88 (220)
T 2qsv_A 83 VLEVTS 88 (220)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 554443
No 4
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.95 E-value=8 Score=28.66 Aligned_cols=73 Identities=16% Similarity=0.106 Sum_probs=51.0
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEE
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSV 91 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l 91 (258)
++.-|++.+..+.++|.|+.+..+..+..+ . ..-..|+...-.-.|+||++.++.-.|.|.. ...|.-.+
T Consensus 21 ~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~-----~--~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~---~g~f~~~i 90 (112)
T 2e6j_A 21 KVFTGSAHCYEAILYNKGSIDALFNMTPPT-----S--ALGACFVFSPKEGIIEPSGVQAIQISFSSII---LGNFEEEF 90 (112)
T ss_dssp EEESSCCEEEEEEEEECCSSCEEEEECCCS-----S--HHHHHCEEESSEEEECTTBCCEEEEEECCCC---CEEEEEEE
T ss_pred eEEECCEEEEEEEEEECCcceEEEEEecCC-----c--cccCcEEEECCcCEECCCCEEEEEEEEECCC---cceEEEEE
Confidence 467799999999999999999887765311 0 0011344444457899999999999999875 24455555
Q ss_pred EEE
Q psy4382 92 NLQ 94 (258)
Q Consensus 92 ~l~ 94 (258)
.+.
T Consensus 91 ~v~ 93 (112)
T 2e6j_A 91 LVN 93 (112)
T ss_dssp CEE
T ss_pred EEE
Confidence 443
No 5
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.28 E-value=5 Score=30.84 Aligned_cols=68 Identities=15% Similarity=0.152 Sum_probs=49.4
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEE
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVN 92 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~ 92 (258)
.+-|+..+..+.++|.|+.+.... +..+ ..|+...-.-.|+||++.++.-+|.|.+ ...|.-.+.
T Consensus 37 ~~v~~~~~~~~~l~N~g~~~~~f~-----~~~~-------~~F~i~P~~g~L~pg~~~~i~V~F~P~~---~g~~~~~l~ 101 (122)
T 2ys4_A 37 CPVKYSTQKILLVRNIGNKNAVFH-----IKTC-------RPFSIEPAIGTLNVGESMQLEVEFEPQS---VGDHSGRLI 101 (122)
T ss_dssp EESSSCEEEEEEEECCSSSCEEEE-----EECC-------TTEEEESSEEEECTTCEEEEEEEECCSS---SBCCCCBCE
T ss_pred eecCCeEEEEEEEEECCCCCEEEE-----EecC-------CCeEEECCcCEECCCCEEEEEEEEEcCC---CccEEEEEE
Confidence 456899999999999999877553 2211 2455555568899999999999999985 344554555
Q ss_pred EEE
Q psy4382 93 LQY 95 (258)
Q Consensus 93 l~Y 95 (258)
+.|
T Consensus 102 v~~ 104 (122)
T 2ys4_A 102 VCY 104 (122)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 6
>1so9_A Cytochrome C oxidase assembly protein CTAG; immunoglobulin-like fold, copper protein, structural proteomics in europe, spine; NMR {Sinorhizobium meliloti} SCOP: b.146.1.1 PDB: 1sp0_A
Probab=71.73 E-value=2.4 Score=35.93 Aligned_cols=95 Identities=19% Similarity=0.323 Sum_probs=60.2
Q ss_pred ccceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeec-eeecCCceeEEEEEEeeCcccCCcc
Q psy4382 8 YINMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYN-RIVKPGHEATLGYSFVPAEAVAGRP 86 (258)
Q Consensus 8 ~~~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~-~~V~pg~~at~~Y~F~p~~~~~~~p 86 (258)
-..+++.-|+...+.+..+|..+++++-..+-. -.|.....|..-+-=-=+. ..+.|||+..+|=.|.-+..+.--|
T Consensus 53 q~~v~V~pGE~~~~~y~a~N~sd~~i~G~A~yn--V~P~~a~~YF~KieCFCF~eQ~L~pgE~~~MPV~F~IDP~i~~D~ 130 (164)
T 1so9_A 53 QRDIDVRIGETVQIMYRAKNLASTPTTGQATFN--VTPMAAGAYFNKVQCFCFTETTLEPGEEMEMPVVFFVDPEIVKPV 130 (164)
T ss_dssp CSEEEECTTCCCCEEEEEEECSSSCEECCCEEE--ECSSSCSTTBTTSCCSSCSCCEECTTCEEEEEECCCBCGGGGSST
T ss_pred eeEEEEcCCCeEEEEEEEECCCCCcEEEEECce--eCHHHHhhhccceeeEcccCcccCCCCeEeeeEEEEECCCcCCCc
Confidence 456789999999999999999999985333221 1133322222211111133 7899999999999997665442111
Q ss_pred eeEEEEEEEeecCCceeEEEEecceEEEEeecccccccc
Q psy4382 87 FGLSVNLQYRDEHNNFFYEGIYNETVNIITLGYSFVPAE 125 (258)
Q Consensus 87 ~~L~l~l~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e 125 (258)
+ .+.|+-|||.|-|.+..
T Consensus 131 ------------~---------~~~v~tITLSYTFf~~~ 148 (164)
T 1so9_A 131 ------------E---------TQGIKTLTLSYTFYPRE 148 (164)
T ss_dssp ------------T---------TTTCCBCCEEEEECSCC
T ss_pred ------------c---------cCCCCEEEEEEEEEecC
Confidence 1 13466788888888743
No 7
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=71.13 E-value=13 Score=28.04 Aligned_cols=87 Identities=20% Similarity=0.277 Sum_probs=53.9
Q ss_pred CCccceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCc
Q psy4382 6 GVYINMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGR 85 (258)
Q Consensus 6 ~~~~~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~ 85 (258)
++.....+.+|++++|.|.-.+.|..+++|... .|.. ......|......++..+|.|.+
T Consensus 18 G~Gl~~~v~~~~~~~F~V~~~~aG~~~l~V~i~-----~p~g----------~~~~~~v~d~~dGty~v~Y~p~~----- 77 (108)
T 2dj4_A 18 GPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVL-----GPRG----------LVEPVNVVDNGDGTHTVTYTPSQ----- 77 (108)
T ss_dssp STTTSSCCBTTSCEEEEEECTTTCSCCEEEEEE-----CSSS----------CEECCCCEECSSSEEEEEECCSS-----
T ss_pred CCCcCcCccCCccEEEEEEECCCCCceEEEEEE-----CCCC----------CEeeeEEEECCCCEEEEEEEeCC-----
Confidence 333444467899999999999999999888554 3432 01222233334457888888874
Q ss_pred ceeEEEEEEEeecCCceeEEEEecceEEEEeecccccccccccCCCCcccccce
Q psy4382 86 PFGLSVNLQYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRPFGLSVNLQ 139 (258)
Q Consensus 86 p~~L~l~l~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e~~~g~p~g~~i~~~ 139 (258)
+-...|.+.|.+ +.++|.||-+.|...
T Consensus 78 ~G~y~i~V~~~g---------------------------~~V~gSPF~v~V~~~ 104 (108)
T 2dj4_A 78 EGPYMVSVKYAD---------------------------EEIPRSPFKVKVLPT 104 (108)
T ss_dssp CEEEEEEEEESS---------------------------SBCTTCSEEEEEBCS
T ss_pred CeeEEEEEEECC---------------------------EECCCCCEEEEEecc
Confidence 233455554443 447788887776643
No 8
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=68.95 E-value=42 Score=26.67 Aligned_cols=66 Identities=14% Similarity=0.271 Sum_probs=44.9
Q ss_pred eecCCceEEEEEEEEeCCCCc---EEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCccee
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQD---FTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFG 88 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~---~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~ 88 (258)
.+..|+.+++-+.++|.|..+ ++|.... + +..+..- ...+.||++.++.+.+.|.. ...+.
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyv-------n-g~~v~t~-----~v~La~G~s~tv~f~~~~~~---~G~~~ 91 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKVRVYI-------N-GTLYKNW-----TVSLGPKEEKVLTFNWTPTQ---EGMYR 91 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEEEEEE-------T-TEEEEEE-----EEEECTTCEEEEEEEECCSS---CEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEEEEEE-------C-CEEEeeE-----EeccCCCCeEEEEEEEEcCC---CcEEE
Confidence 567899999999999999755 3433221 1 2233211 23599999999999998653 45566
Q ss_pred EEEEE
Q psy4382 89 LSVNL 93 (258)
Q Consensus 89 L~l~l 93 (258)
|...+
T Consensus 92 v~AvV 96 (127)
T 3idu_A 92 INATV 96 (127)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66655
No 9
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=67.99 E-value=16 Score=28.55 Aligned_cols=73 Identities=21% Similarity=0.229 Sum_probs=44.9
Q ss_pred CCccceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCc
Q psy4382 6 GVYINMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGR 85 (258)
Q Consensus 6 ~~~~~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~ 85 (258)
++.....+..|++..|.|.-.+.|..+++|... .|... .....|......++.-+|.|.+
T Consensus 18 G~GL~~~v~vg~~~~F~V~a~daG~~~l~V~I~-----~p~g~----------~v~~~v~d~~dGty~V~Y~p~~----- 77 (124)
T 2dmb_A 18 GPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVL-----TPDGT----------EAEADVIENEDGTYDIFYTAAK----- 77 (124)
T ss_dssp SGGGSSEEESSSEEEEEEECSSSCSCCEEEEEE-----CTTSC----------BCCCEEEECTTSCEEEEEECSS-----
T ss_pred CCCccCccccCCcEEEEEEEecCCCCcEEEEEE-----CCCCC----------EEeeEEEeCCCCEEEEEEEcCC-----
Confidence 344444567899999999999999999987753 34321 1222233334457778888874
Q ss_pred ceeEEEEEEEeec
Q psy4382 86 PFGLSVNLQYRDE 98 (258)
Q Consensus 86 p~~L~l~l~Y~~~ 98 (258)
+-...|.+.|.+.
T Consensus 78 ~G~y~I~V~~~g~ 90 (124)
T 2dmb_A 78 PGTYVIYVRFGGV 90 (124)
T ss_dssp CEEEEEEEEESSC
T ss_pred CEEEEEEEEECCE
Confidence 3344555544433
No 10
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=65.75 E-value=12 Score=35.64 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=43.4
Q ss_pred cCCceEEEEEEEEeCCCCcEEEE-EEeeeee--ccc------ccceEEEecceeee--ceeecCCceeEEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLD-TLDASLR--YPM------DFNFYIQNFSTIIY--NRIVKPGHEATLGYSF 76 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~-~i~gSl~--~P~------d~~~~iqNfTa~~~--~~~V~pg~~at~~Y~F 76 (258)
+.|....+-+.++|+|++++.+. ...|.+| +|. ++...+-+-...+. +..+.|||+.++.-+-
T Consensus 261 vpgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 261 VPGRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTA 334 (382)
T ss_dssp SSCSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEE
T ss_pred cCCcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEe
Confidence 56899999999999999999885 4455544 332 12222334434444 3679999999998665
No 11
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=63.82 E-value=41 Score=25.73 Aligned_cols=67 Identities=24% Similarity=0.204 Sum_probs=45.7
Q ss_pred cCCceEEEEEEEEeCCCCcEE--EEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFT--LDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSV 91 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~t--V~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l 91 (258)
.-|++..+.|.|+|-=+.+++ +..++|+ -+++- -...+ ..|.||+++++...|+|.. ..+..|..
T Consensus 17 ~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~--------GL~~~-~~~~~-~~v~pg~~~~~~~~~~P~~---~G~~~L~a 83 (102)
T 2xzz_A 17 VVGQECEVQIVFKNPLPVTLTNVVFRLEGS--------GLQRP-KILNV-GDIGGNETVTLRQSFVPVR---PGPRQLIA 83 (102)
T ss_dssp CSSSCEEEEEEEECCSSSCBCSEEEEEEET--------TTEEE-EEEEE-CCBCTTCEEEEEEEECCCS---CSSCCCEE
T ss_pred ccCCeEEEEEEEECCCCCcccCEEEEEECC--------CCCcc-eEEEc-CcCCCCCEEEEEEEEecCc---ccceEEEE
Confidence 469999999999999776652 4445554 12222 22334 4599999999999999985 33455655
Q ss_pred EE
Q psy4382 92 NL 93 (258)
Q Consensus 92 ~l 93 (258)
++
T Consensus 84 ~f 85 (102)
T 2xzz_A 84 SL 85 (102)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 12
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=62.13 E-value=34 Score=25.95 Aligned_cols=80 Identities=18% Similarity=0.291 Sum_probs=49.9
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEE
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVN 92 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~ 92 (258)
+.+|++++|.|.-.+.|..+++|.. ..|... .....|.-....++.-+|.|.+ +-...|.
T Consensus 26 v~~~~~~~F~V~~~daG~~~l~V~v-----~~p~g~----------~~~~~v~d~~dGty~v~Y~p~~-----~G~y~i~ 85 (115)
T 2d7m_A 26 IPASLPVEFTIDARDAGEGLLTVQI-----LDPEGK----------PKKANIRDNGDGTYTVSYLPDM-----SGRYTIT 85 (115)
T ss_dssp EESSSCEEEEEEESSSCSSCEEEEE-----ECTTSC----------BCCEEEEECSSSCEEEEECCCS-----CEEEEEE
T ss_pred cccCCcEEEEEEECCCCCCEEEEEE-----ECCCCC----------eeeeEEEECCCCEEEEEEEeCC-----CceEEEE
Confidence 5689999999999999999887754 334321 1111222234457777788875 2334555
Q ss_pred EEEeecCCceeEEEEecceEEEEeecccccccccccCCCCcccccce
Q psy4382 93 LQYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRPFGLSVNLQ 139 (258)
Q Consensus 93 l~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e~~~g~p~g~~i~~~ 139 (258)
+.|.+ +.++|.||-+.|...
T Consensus 86 V~~~g---------------------------~~I~gSPF~v~v~~~ 105 (115)
T 2d7m_A 86 IKYGG---------------------------DEIPYSPFRIHALPT 105 (115)
T ss_dssp EEESS---------------------------CBCTTCSEEEEEECC
T ss_pred EEECC---------------------------EECCCCCEEEEEeeC
Confidence 54433 346788887776543
No 13
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=61.67 E-value=22 Score=26.95 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=50.8
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNL 93 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l 93 (258)
..|++.+|.|.-.+.|..+++|.... |.. ......|......|+.-+|.|.+ +....|.+
T Consensus 25 ~~g~~~~F~V~~~daG~~~l~v~i~~-----~~g----------~~~~~~v~d~~dGty~v~Y~p~~-----~G~y~i~V 84 (113)
T 2dia_A 25 KVGEAGLLSVDCSEAGPGALGLEAVS-----DSG----------TKAEVSIQNNKDGTYAVTYVPLT-----AGMYTLTM 84 (113)
T ss_dssp ETTCCCCEEEEESSCCSCCEEEEEEE-----TTT----------EECEEEEEECTTSEEEEEEECSS-----CEEEEEEE
T ss_pred ecCCCEEEEEEECCCCCccEEEEEEC-----CCC----------CEeeEEEEECCCCEEEEEEEeCC-----CccEEEEE
Confidence 57899999999999999999887543 321 11222333334457777788864 33345555
Q ss_pred EEeecCCceeEEEEecceEEEEeecccccccccccCCCCccccccee
Q psy4382 94 QYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRPFGLSVNLQY 140 (258)
Q Consensus 94 ~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e~~~g~p~g~~i~~~~ 140 (258)
.|. .+.++|.||-+.|...+
T Consensus 85 ~~~---------------------------g~~V~gSPf~v~v~~~~ 104 (113)
T 2dia_A 85 KYG---------------------------GELVPHFPARVKVEPAV 104 (113)
T ss_dssp EET---------------------------TEECTTCSEEEEEECCC
T ss_pred EEC---------------------------CEECCCCCEEEEEcccC
Confidence 443 34578888888777554
No 14
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=60.74 E-value=58 Score=25.45 Aligned_cols=66 Identities=12% Similarity=0.284 Sum_probs=46.5
Q ss_pred eecCCceEEEEEEEEeCCC---CcEEEEEEeeeeecccccceEEEecceeeec--eeecCCceeEEEEEEeeCcccCCcc
Q psy4382 12 DLPAGSVVEFLVGFTNKGK---QDFTLDTLDASLRYPMDFNFYIQNFSTIIYN--RIVKPGHEATLGYSFVPAEAVAGRP 86 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~---~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~--~~V~pg~~at~~Y~F~p~~~~~~~p 86 (258)
....|+.+.|-+.+.|.|. ..++|... + |-+..... ..|.+|.+.++.|++.|.. ++..
T Consensus 14 ~~~~~~~~ti~atVkN~G~~~a~~~~V~ly-------------~-~g~~v~t~~v~~LaaG~s~tv~~~w~~~~--~~G~ 77 (114)
T 2l0d_A 14 TVVPNTVNTMTATIENQGNKDSTSFNVSLL-------------V-DGIVVDTQTVTSLESENSTNVDFHWTLDG--TANS 77 (114)
T ss_dssp EECTTSEEEEEEEEEECSSSCBCCEEEEEE-------------E-TTEEEEEEEESCBCBTCEEEEEEEEECCC--SCSE
T ss_pred CcCCCCeEEEEEEEEECCCCCCCCEEEEEE-------------E-CCEEEcceecccccCCCEEEEEEEEeecC--cCce
Confidence 3679999999999999997 45655532 1 22222222 2488999999999998861 1477
Q ss_pred eeEEEEE
Q psy4382 87 FGLSVNL 93 (258)
Q Consensus 87 ~~L~l~l 93 (258)
+.|.+.+
T Consensus 78 ytl~a~V 84 (114)
T 2l0d_A 78 YTLTVNV 84 (114)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8887766
No 15
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=60.00 E-value=22 Score=32.65 Aligned_cols=71 Identities=14% Similarity=0.082 Sum_probs=42.5
Q ss_pred cCCccce-eecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccC
Q psy4382 5 HGVYINM-DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVA 83 (258)
Q Consensus 5 ~~~~~~~-~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~ 83 (258)
+|++... ....|++++|.|.-++.|..++.|... .|.. ...............++..+|+|.+
T Consensus 260 ~GpGle~~g~~vg~p~~F~Vdt~~AG~g~l~v~V~-----~P~G--------~~~~~~v~~~~~~~gty~v~y~P~~--- 323 (347)
T 4b7l_A 260 YGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVE-----DPEG--------NKEEAQVTPDSDKNKTYSVEYLPKV--- 323 (347)
T ss_dssp ESGGGSSSCCCTTSCEEEEEECTTTCSCCEEEEEE-----CTTS--------CEEECEEEESSTTCSEEEEEECCCS---
T ss_pred EeccccccCceeCCEEEEEEEeCCCCCCceEEEEE-----CCCC--------CeecCEEEEEcCCCCEEEEEEEECC---
Confidence 3444432 367899999999999999988876543 3322 0111122223344567888888875
Q ss_pred CcceeEEE
Q psy4382 84 GRPFGLSV 91 (258)
Q Consensus 84 ~~p~~L~l 91 (258)
+.++.+.|
T Consensus 324 ~G~~~I~V 331 (347)
T 4b7l_A 324 TGLHKVTV 331 (347)
T ss_dssp SSEEEEEE
T ss_pred CEeEEEEE
Confidence 45664443
No 16
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=58.62 E-value=32 Score=28.23 Aligned_cols=67 Identities=16% Similarity=0.111 Sum_probs=46.6
Q ss_pred ecCC-ceEEEEEEEEeCCCCcEEEEEEeeeeecccccc--eEEEecce-eeec-eeecCCceeEEEEEEeeC
Q psy4382 13 LPAG-SVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFN--FYIQNFST-IIYN-RIVKPGHEATLGYSFVPA 79 (258)
Q Consensus 13 l~~G-~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~--~~iqNfTa-~~~~-~~V~pg~~at~~Y~F~p~ 79 (258)
+.+| +-+.+-|++.|+|++++++....=.|.+..... ........ ..+. ..|.||++++-...|--.
T Consensus 42 ~~~G~~fviV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~~~~~~~~~~~l~~g~L~pG~kvtG~ivFeVP 113 (159)
T 3cfu_A 42 IKDDEERLIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRPVFSIEEKGRILMGGTLVSGKKVTGVLSYVIP 113 (159)
T ss_dssp BCCCSEEEEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCCEECSTTTTTBCCEEEECTTCEEEEEEEEEES
T ss_pred cCCCCEEEEEEEEEEECCCCceeeCcccEEEEeCCCCEEeceeeecccCCcccccccCCCCEEEEEEEEEEC
Confidence 3688 789999999999999998877776776665421 12211111 1333 589999999999999443
No 17
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=58.57 E-value=1.7e+02 Score=30.04 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=82.5
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEE--eeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCc--ce
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTL--DASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGR--PF 87 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i--~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~--p~ 87 (258)
.+.-|+...+.+.++|+.+++-+|... ..+..|- ......+........|.|+++.+++.....++..+-- .-
T Consensus 526 ~~~iG~df~v~l~~~N~s~~~~~v~~~l~a~~v~Yt---G~~~~~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~~~L~d~~ 602 (731)
T 1ex0_A 526 NAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYT---GVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLEQA 602 (731)
T ss_dssp CCBTTCCEEEEEEEEECSSSCEEEEEEEEEEEECTT---SCEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTC
T ss_pred CCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeC---CccccceeEeeEEEEECCCceEEEEEEECHHHHhhhccCCC
Confidence 356799999999999999876655544 3333332 3345667777788999999999999988776643211 22
Q ss_pred eEEEEEEEeecCCceeEEEEecce-----EEEEeecccccccccccCCCCcccccceecccCCceeeeeeeeeeEEEEec
Q psy4382 88 GLSVNLQYRDEHNNFFYEGIYNET-----VNIITLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEI 162 (258)
Q Consensus 88 ~L~l~l~Y~~~~~~~~~~~~~n~~-----v~~~t~~~~~~p~e~~~g~p~g~~i~~~~~d~~g~~y~~~vfN~TVtVvE~ 162 (258)
-+.+.+.-+..++...+..+.+=. ++|. ++.+..-|+++-..|.. + |......-|..++| |-
T Consensus 603 ~i~~~a~~~v~et~~~~~~~~di~l~~P~l~I~------v~g~~~v~~~l~v~vsf--~----NPL~~~L~~c~~~v-EG 669 (731)
T 1ex0_A 603 SLHFFVTARINETRDVLAKQKSTVLTIPEIIIK------VRGTQVVGSDMTVTVQF--T----NPLKETLRNVWVHL-DG 669 (731)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEECBCCCCEEE------EEECCBTTSCEEEEEEE--E----CCSSSCEEEEEEEE-EE
T ss_pred EEEEEEEEEECCCCeEEEEEEEEEEeCCCEEEE------eCCCcccCCeEEEEEEE--E----CCCCCcccceEEEE-EC
Confidence 244444445544433333333222 2222 35667777776555443 2 34444555554444 43
Q ss_pred CCCcCc
Q psy4382 163 DEGLDG 168 (258)
Q Consensus 163 ~~sfD~ 168 (258)
+....+
T Consensus 670 ~GL~~~ 675 (731)
T 1ex0_A 670 PGVTRP 675 (731)
T ss_dssp TTTEEE
T ss_pred CCCCce
Confidence 333333
No 18
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=58.48 E-value=16 Score=34.69 Aligned_cols=85 Identities=15% Similarity=0.199 Sum_probs=54.8
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeeccccc-----ceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcce
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDF-----NFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPF 87 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~-----~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~ 87 (258)
...||.+.+-+.++|+... +|..|..++.--.++ ..+-.-.....-+..|.||.+.+..|...|.-+-.-...
T Consensus 205 Y~pGE~I~V~v~I~N~Ssk--~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va~~e~~e~V~pgst~~k~~~L~P~l~~n~~k~ 282 (392)
T 1suj_A 205 YYHGEPINVNVKINNTTGK--IVKKIKIIVEQVTDVVLFSLDKYVKTVCAEETNDTVAANSTLSKTFSVTPMLANNREKR 282 (392)
T ss_dssp EETTCCEEEEEEEEECSSS--EEEEEEEEEEEEEEECSSSCCEEEEEEEEEECCCCBCTTEEEEEEEEECCCGGGCSCCT
T ss_pred ccCCCEEEEEEEEECCCCC--cEeEEEEEEEEEEEEEEecCCcEEEEEEEEecCCCcCCCCEEEEEEEEeccccCCCccc
Confidence 4689999999999999987 557777777665442 223222233334568999999888888877653222334
Q ss_pred eEEEEEEEeecC
Q psy4382 88 GLSVNLQYRDEH 99 (258)
Q Consensus 88 ~L~l~l~Y~~~~ 99 (258)
+|.|+-.+++++
T Consensus 283 glaldg~lk~~d 294 (392)
T 1suj_A 283 GLALDGKLKHED 294 (392)
T ss_dssp TCCBSSCTTBSS
T ss_pred eeeecccccCCC
Confidence 455554444444
No 19
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=57.85 E-value=1.4e+02 Score=30.44 Aligned_cols=138 Identities=14% Similarity=0.072 Sum_probs=78.8
Q ss_pred CCceEEEEEEEEeCCCCcEEEEEE--eeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCc--ceeEE
Q psy4382 15 AGSVVEFLVGFTNKGKQDFTLDTL--DASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGR--PFGLS 90 (258)
Q Consensus 15 ~G~~~~~lv~~~N~g~~~~tV~~i--~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~--p~~L~ 90 (258)
-|+...+.+.++|+.+++-+|... ..+..|- +.....+........|.|+++.+++.....++...-- .--+.
T Consensus 484 ~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~Yt---G~~~~~~~~~~~~~~L~p~~~~~v~~~i~y~~Y~~~L~d~~~i~ 560 (695)
T 1g0d_A 484 FGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYN---SLRRGECQRKTISVTVPAHKAHKEVMRLHYDDYVRCVSEHHLIR 560 (695)
T ss_dssp TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTT---CBCCCCCCEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEE
T ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeC---CcccCceeEeeEEEEECCCceEEEEEEECHHHHhhhcccCCeEE
Confidence 799999999999998877655444 3333332 3345566667778999999999999988766633211 22244
Q ss_pred EEEEEeecCCceeEEEEecce-----EEEEeecccccccccccCCCCcccccceecccCCceeeeeeeeeeEEEEecCCC
Q psy4382 91 VNLQYRDEHNNFFYEGIYNET-----VNIITLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEG 165 (258)
Q Consensus 91 l~l~Y~~~~~~~~~~~~~n~~-----v~~~t~~~~~~p~e~~~g~p~g~~i~~~~~d~~g~~y~~~vfN~TVtVvE~~~s 165 (258)
+...-+..++...+..+.+=. ++|. ++.+..-|+|+-..|.. + +......-|..++| |-+..
T Consensus 561 ~~a~~~v~et~~~~~~~~di~l~~P~l~I~------v~g~~~v~~~l~a~vsf--~----NPL~~~L~~c~~~v-EG~GL 627 (695)
T 1g0d_A 561 VKALLDAPGENGPIMTVANIPLSTPELLVQ------VPGKAVVWEPLTAYVSF--T----NPLPVPLKGGVFTL-EGAGL 627 (695)
T ss_dssp EEEEEECCC---EEEEEEEEECBCCCCEEE------CCSCEETTCCEEEEEEE--E----CCSSSCEESCEEEE-EETTT
T ss_pred EEEEEEECCCCeEEEEEEEEEEcCCCEEEE------eCCCcccCCeEEEEEEE--E----CCCCCcccceEEEE-ECCCC
Confidence 444444444332233333221 2222 46777777776655544 2 34445555555554 33333
Q ss_pred cCc
Q psy4382 166 LDG 168 (258)
Q Consensus 166 fD~ 168 (258)
..+
T Consensus 628 ~~~ 630 (695)
T 1g0d_A 628 LSA 630 (695)
T ss_dssp EEE
T ss_pred Ccc
Confidence 333
No 20
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=56.04 E-value=1.8e+02 Score=29.58 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=80.9
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEE--eeeeecccccceEEEec-ceeeeceeecCCceeEEEEEEeeCcccCCc--c
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTL--DASLRYPMDFNFYIQNF-STIIYNRIVKPGHEATLGYSFVPAEAVAGR--P 86 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i--~gSl~~P~d~~~~iqNf-Ta~~~~~~V~pg~~at~~Y~F~p~~~~~~~--p 86 (258)
.+.-|+...+.+.++|+.+++-+|... ..+..|- +....++ ........|.|+++.+++.....++...-- .
T Consensus 482 ~~~~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~Yt---G~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y~~Y~~~L~d~ 558 (687)
T 2q3z_A 482 SMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYN---GILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTES 558 (687)
T ss_dssp CCBTTCCEEEEEEEEECSSSCEEEEEEEEEEEECTT---CCEEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTT
T ss_pred CCcCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeC---CcccceEeeeeeeEEEECCCceEEEEEEECHHHHhhhccCC
Confidence 356799999999999999877665544 2233322 3456666 667778999999999999988777644221 2
Q ss_pred eeEEEEEEEeecCCceeEEEEecceE-----EEEeecccccccccccCCCCcccccceecccCCceeeeeeeeeeEEEEe
Q psy4382 87 FGLSVNLQYRDEHNNFFYEGIYNETV-----NIITLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIE 161 (258)
Q Consensus 87 ~~L~l~l~Y~~~~~~~~~~~~~n~~v-----~~~t~~~~~~p~e~~~g~p~g~~i~~~~~d~~g~~y~~~vfN~TVtVvE 161 (258)
--+.+.+.-+..++...+..+.+=.+ +|. ++.+..-|+++-..|.. + |......-|..++| |
T Consensus 559 ~~i~~~a~~~v~et~~~~~~~~di~l~~P~l~I~------v~g~~~v~~~~~v~v~f--~----NPL~~~L~~c~~~v-E 625 (687)
T 2q3z_A 559 NLIKVRALLVEPVINSYLLAERDLYLENPEIKIR------ILGEPKQKRKLVAEVSL--Q----NPLPVALEGCTFTV-E 625 (687)
T ss_dssp CEEEEEEEEEETTTTEEEEEEEEEECBCCCCEEE------EESCCSSSSCEEEEEEE--E----CCSSSCBCSEEEEE-E
T ss_pred CEEEEEEEEEECCCCeEEEEEEEEEEeCCCEEEE------eCCCcccCCeEEEEEEE--E----CCCCCcccceEEEE-E
Confidence 22444444455554433433332222 221 35666667766554433 2 33444444444443 4
Q ss_pred cCCCcCc
Q psy4382 162 IDEGLDG 168 (258)
Q Consensus 162 ~~~sfD~ 168 (258)
-+....+
T Consensus 626 G~GL~~~ 632 (687)
T 2q3z_A 626 GAGLTEE 632 (687)
T ss_dssp CTTTCSS
T ss_pred CCCCCCC
Confidence 4433444
No 21
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=55.78 E-value=18 Score=34.71 Aligned_cols=60 Identities=23% Similarity=0.440 Sum_probs=41.7
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEE-Eeeeeec--cc------cc-ceEEEe--cceeeeceeecCCceeEEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDT-LDASLRY--PM------DF-NFYIQN--FSTIIYNRIVKPGHEATLGYSF 76 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~-i~gSl~~--P~------d~-~~~iqN--fTa~~~~~~V~pg~~at~~Y~F 76 (258)
+.|...++-+.++|+|++++.+.- ..|.+|. |. ++ .+++-| ++ .=+ .+.|||+.+++-.-
T Consensus 295 vpgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~--s~~-pI~PGETrt~~V~a 366 (419)
T 3rfr_A 295 VPGRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS--NDD-VIAPGESKEIVVKI 366 (419)
T ss_dssp SSSSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC--CCC-CBCTTCEEEEEEEE
T ss_pred cCCcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC--CCC-CcCCCcceEEEEEe
Confidence 568899999999999999998743 3333333 21 11 334444 55 334 99999999998666
No 22
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=55.28 E-value=1.8e+02 Score=29.53 Aligned_cols=131 Identities=12% Similarity=0.057 Sum_probs=77.6
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEE--eeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCc--cee
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTL--DASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGR--PFG 88 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i--~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~--p~~ 88 (258)
+.-|+...+.+.++|+.++.-+|... ..+..|- +.....+........|.|+++.+++.....++..+-- .--
T Consensus 492 ~~~G~df~v~l~~~N~s~~~~~v~~~l~a~~v~Yt---G~~~~~~~~~~~~v~L~p~~~~~i~~~i~y~~Y~~~L~d~~~ 568 (692)
T 1vjj_A 492 LAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYN---GTLVHEVWKDSATMSLDPEEEAEHPIKISYAQYERYLKSDNM 568 (692)
T ss_dssp CBTTSCEEEEEEEEECSSSCEEEEEEEEEEEECTT---CCEEEEEEEEEEEEEECTTCEEEEEEEECHHHHHTTCCTTCE
T ss_pred CCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeC---CccccceEEeeEEEEECCCceEEEEEEECHHHHhhhcccCCe
Confidence 46799999999999998866655443 3333332 3456677777788999999999999988766643211 222
Q ss_pred EEEEEEEeecCCceeEEEEecce-----EEEEeecccccccccccCCCCcccccceecccCCceeeeeeeeeeEEE
Q psy4382 89 LSVNLQYRDEHNNFFYEGIYNET-----VNIITLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNI 159 (258)
Q Consensus 89 L~l~l~Y~~~~~~~~~~~~~n~~-----v~~~t~~~~~~p~e~~~g~p~g~~i~~~~~d~~g~~y~~~vfN~TVtV 159 (258)
+.+.+.-+..++.. +..+.+=+ ++|. ++.+..-|+++-..|.. + |......-|..++|
T Consensus 569 i~~~a~~~v~et~~-~~~~~di~l~~P~l~I~------v~g~~~v~~~l~v~v~f--~----NPL~~~L~~c~~~v 631 (692)
T 1vjj_A 569 IRITAVCKVPDESE-VVVERDIILDNPTLTLE------VLNEARVRKPVNVQMLF--S----NPLDEPVRDCVLMV 631 (692)
T ss_dssp EEEEEEEECTTSCC-EEEEEEEECBCCCEEEE------ECSCCBTTSCEEEEEEE--E----CCSSSCBCSEEEEE
T ss_pred EEEEEEEEECCCce-EEEEEEEEEcCCCEEEE------eCCCcccCCeEEEEEEE--E----CCCCCcccceEEEE
Confidence 44444455554433 44333322 2222 35667777776555443 2 33444444444443
No 23
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=55.19 E-value=26 Score=26.13 Aligned_cols=53 Identities=17% Similarity=0.304 Sum_probs=35.0
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
-..|++.+|.|.-.+.|..+++|...+ |... .....|......|+.-+|.|.+
T Consensus 21 ~~vg~~~~F~V~~~~aG~~~l~v~i~~-----~~g~----------~~~~~v~d~~dGty~V~Y~p~~ 73 (100)
T 3rgh_A 21 ATAGEVGQFQVDCSSAGSAELTIEICS-----EAGL----------PAEVYIQDHGDGTHTITYIPLC 73 (100)
T ss_dssp EETTSCEEEEEECTTSCSCCEEEEEEC-----TTSC----------BCEEEEEECSSSEEEEEEECCS
T ss_pred eEcCCcEEEEEEECCCCCceEEEEEEC-----CCCC----------EeEEEEEeCCCCEEEEEEEeCC
Confidence 467999999999999999998876543 3220 1112333344557777777775
No 24
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=55.00 E-value=43 Score=24.01 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=21.1
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTL 38 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i 38 (258)
..|++.+|.|...+.|..+++|...
T Consensus 13 ~vg~~~~F~v~~~~aG~~~l~v~v~ 37 (89)
T 3cnk_A 13 YVGQKSSFTVDCSKAGNNMLLVGVH 37 (89)
T ss_dssp BTTBCEEEEEECTTSCSCCEEEEEE
T ss_pred ECCCCEEEEEEECcCCCCcEEEEEE
Confidence 6789999999999989888877544
No 25
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=53.89 E-value=27 Score=25.43 Aligned_cols=47 Identities=21% Similarity=0.330 Sum_probs=29.4
Q ss_pred ceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEE
Q psy4382 10 NMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSF 76 (258)
Q Consensus 10 ~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F 76 (258)
...+++|+++++. ++|++..+-.+..-+ . .....+.||++.++.+.|
T Consensus 29 ~i~v~~G~tV~~~--~~n~d~~~H~~~~~~-------~-----------~~~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 29 VITIPINESTTLL--LKNKGKSEHTFTIKK-------L-----------GIDVVVESGKEKNITVKP 75 (100)
T ss_dssp EEEECTTSCEEEE--EEECSSSCEEEEEGG-------G-----------TEEEEECTTCEEEEEECC
T ss_pred EEEECCCCEEEEE--EEcCCCceEEEEEec-------C-----------CcceeecCCcceeEEEec
Confidence 4678999998876 478876554433211 0 112468899977766554
No 26
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=53.27 E-value=68 Score=25.43 Aligned_cols=64 Identities=6% Similarity=0.103 Sum_probs=42.0
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
+.-++...--+.++|.|+-+.+...+.- +.+-..--.=|+..+..-.|+||++.++.-.|..+.
T Consensus 39 v~~~~~~~~~l~I~Ntg~vpa~F~f~~~----~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v~~ 102 (140)
T 3qbt_B 39 VKFRQLQKEKFQISNNGQVPCHFSFIPK----LNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSK 102 (140)
T ss_dssp ECBTCCEEEEEEEEECSSSCEEEEEECC----TTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCH
T ss_pred ceeeeeeeeEEEEEcCCccceEEEEecC----CCchhhhhHhhhcCCcccccCCCCeeEEEEEEEEcc
Confidence 4557778889999999999987776621 111000000122234557999999999999997543
No 27
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=53.10 E-value=23 Score=26.02 Aligned_cols=51 Identities=16% Similarity=0.216 Sum_probs=32.7
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
-..|++.+|.|.-.+.+...++|... | |.. ....+.-....++..+|.|.+
T Consensus 19 ~~vg~~~~F~v~t~dag~~~l~v~v~-~----p~~------------~~~~v~d~~dGty~v~Y~p~~ 69 (97)
T 2bp3_A 19 GVVNKPATFTVNTKDAGEGGLSLAIE-G----PSK------------AEISCTDNQDGTCSVSYLPVL 69 (97)
T ss_dssp EETTSCEEEEEECTTCCSEEEEEEEE-E----SSC------------CEEEEEECSSSEEEEEEECSS
T ss_pred EEcCCcEEEEEEECCCCCCcEEEEEE-C----CCC------------CEEEEEECCCCEEEEEEEeCC
Confidence 35689999999999998887776542 2 322 011222334457788888864
No 28
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.35 E-value=20 Score=27.47 Aligned_cols=53 Identities=17% Similarity=0.306 Sum_probs=35.3
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
+.+|++++|.|.-.+.|..+++|.. ..|... .....|......++.-+|.|.+
T Consensus 36 v~~g~~~~F~V~~~daG~~~l~v~v-----~~p~g~----------~~~~~v~d~~dGty~v~Y~p~~ 88 (119)
T 2e9j_A 36 VPASLPVDFAIDARDAGEGLLAVQI-----TDQEGK----------PKRAIVHDNKDGTYAVTYIPDK 88 (119)
T ss_dssp EETTSCEEEEEEESSCCCCCEECCE-----ECTTCC----------CCCEEEEECCSSEEEEEECCCS
T ss_pred eecCCcEEEEEEECCCCCCeEEEEE-----ECCCCC----------EEEEEEEECCCCEEEEEEEeCC
Confidence 5689999999999999998887664 334320 1122333345557888888864
No 29
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=51.40 E-value=52 Score=25.12 Aligned_cols=81 Identities=21% Similarity=0.332 Sum_probs=51.7
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNL 93 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l 93 (258)
..|++.+|.|.-.+.|...++|... .|.. ....+.-....++..+|.|.+ +..+ .|.+
T Consensus 32 ~vg~~~~F~v~t~dag~~~l~v~v~-----~p~~------------~~~~v~d~~dGty~v~Y~p~~---~G~y--~I~V 89 (119)
T 2k9u_A 32 VAGVPAEFSIWTREAGAGGLSIAVE-----GPSK------------AEIAFEDRKDGSCGVSYVVQE---PGDY--EVSI 89 (119)
T ss_dssp ETTCEEEEEEECCSSCSEEEEEEEE-----SSSC------------CEEEEECCSSSEEEEEEECCS---SEEE--EEEE
T ss_pred EcCCeEEEEEEECCCCCCcEEEEEe-----CCCC------------CeEEEEECCCCEEEEEEEECC---CceE--EEEE
Confidence 4699999999999999888877642 2322 122344455567888888864 3444 4455
Q ss_pred EEeecCCceeEEEEecceEEEEeecccccccccccCCCCcccccceeccc
Q psy4382 94 QYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRPFGLSVNLQYRDE 143 (258)
Q Consensus 94 ~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e~~~g~p~g~~i~~~~~d~ 143 (258)
.|.+ +.++|.||-+.|.....|+
T Consensus 90 ~~~g---------------------------~~I~gSPF~v~v~~~~~d~ 112 (119)
T 2k9u_A 90 KFND---------------------------EHIPDSPFVVPVASLSDDA 112 (119)
T ss_dssp EETS---------------------------CBCSSCSEEEEEESSCSSC
T ss_pred EECC---------------------------EECCCCCEEEEEecCCCCc
Confidence 3433 4577888877776544443
No 30
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=49.52 E-value=64 Score=30.46 Aligned_cols=76 Identities=17% Similarity=0.211 Sum_probs=51.3
Q ss_pred cceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCccee
Q psy4382 9 INMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFG 88 (258)
Q Consensus 9 ~~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~ 88 (258)
+...+++|+..++-+.++|.+..++.=. .=++..|..+. +.. --..++||+.+++...+.+.....+..|-
T Consensus 365 ~~~~~~~g~~~~~~~~vtn~~~~~~~~~--~~~~~~~~~~~--~~~-----~~~~~~~g~~~t~~~~vt~~~~~~~g~y~ 435 (601)
T 1w8o_A 365 PDVALEPGQQVTVPVAVTNQSGIAVPKP--SLQLDASPDWQ--VQG-----SVEPLMPGRQAKGQVTITVPAGTTPGRYR 435 (601)
T ss_dssp CCEEECTTCEEEEEEEEECCSSSCBSSC--EEEEECCTTSE--EEE-----EECCBCTTCEEEEEEEEECCTTCCCEEEE
T ss_pred ccceecCCceeEEEEEEECCCceeccCc--eEEEecCCCcE--Eec-----cccccCCCCceEEEEEEecCCCCCCCcEE
Confidence 4567999999999999999876544111 11234455542 222 12667899999999999887766666776
Q ss_pred EEEEE
Q psy4382 89 LSVNL 93 (258)
Q Consensus 89 L~l~l 93 (258)
|.+.+
T Consensus 436 l~~~~ 440 (601)
T 1w8o_A 436 VGATL 440 (601)
T ss_dssp EEEEE
T ss_pred eeEEE
Confidence 66554
No 31
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.52 E-value=49 Score=24.35 Aligned_cols=82 Identities=15% Similarity=0.230 Sum_probs=48.2
Q ss_pred eecCCceEEEEEEEEeCCCC-------cEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCC
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQ-------DFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAG 84 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~-------~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~ 84 (258)
....|++.+|.|...+.+.+ .+.|.... |... .......|......|+.-+|.|.+ +
T Consensus 23 ~~~~g~~~~F~V~~~d~~G~~~~~Gg~~~~v~i~~-----p~~~--------~~~~~~~v~D~~dGty~v~y~p~~---~ 86 (113)
T 2ds4_A 23 RAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVP-----KDKK--------DSPVRTMVQDNKDGTYYISYTPKE---P 86 (113)
T ss_dssp EEETTCCEEEEEECBBTTSSBCCCCCCCEEEEEEE-----SSCS--------SCCCEEEEECCSSSEEEEEEECSS---S
T ss_pred ceecCCcEEEEEEEECCCCCCcccCCceEEEEEEe-----cCCC--------CceeEEEEEECCCCEEEEEEEeCC---C
Confidence 46789999999999988544 45544432 3210 011122344445567777787775 3
Q ss_pred cceeEEEEEEEeecCCceeEEEEecceEEEEeecccccccccccCCCCcccccc
Q psy4382 85 RPFGLSVNLQYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRPFGLSVNL 138 (258)
Q Consensus 85 ~p~~L~l~l~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e~~~g~p~g~~i~~ 138 (258)
..+.|.|.+ . .+.++|.||-+.|..
T Consensus 87 G~y~i~V~~--~---------------------------g~~i~gSPF~v~v~~ 111 (113)
T 2ds4_A 87 GVYTVWVCI--K---------------------------EQHVQGSPFTVTVRR 111 (113)
T ss_dssp EEEEEEEEE--S---------------------------SCBCTTCSEEEEEEC
T ss_pred eEEEEEEEE--C---------------------------CEECCCCCEEEEEEc
Confidence 445444443 2 345788888777654
No 32
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=48.00 E-value=23 Score=32.70 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=45.8
Q ss_pred ceeecC----CceEEEEEEEEeCCCCcEEEEEEeeeeeccc--ccceEEEecceeee------------c--eeecCCce
Q psy4382 10 NMDLPA----GSVVEFLVGFTNKGKQDFTLDTLDASLRYPM--DFNFYIQNFSTIIY------------N--RIVKPGHE 69 (258)
Q Consensus 10 ~~~l~~----G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~--d~~~~iqNfTa~~~------------~--~~V~pg~~ 69 (258)
.++|.. ...+++.+.++|+|+++++|..-. +.+.. +.=.+-++-+.+.| . ..|+||++
T Consensus 25 ~v~Ls~~~~~~~~~~vk~tvtN~g~~~~~lLk~~--~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~S 102 (343)
T 2x3c_A 25 DAQLTLVDGSTDDVRVNLTLTNTGDKPIRLLKWQ--LPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQS 102 (343)
T ss_dssp EEEEEECCCSSSCCEEEEEEEECSSSCEEEEGGG--SCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCE
T ss_pred EEEEEecccCCCCeEEEEEEEeCCCCceEeeccC--CCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCe
Confidence 444544 778999999999999999887754 43432 11011223222222 1 56899996
Q ss_pred eEEEEEEeeCccc-CCcceeEEE
Q psy4382 70 ATLGYSFVPAEAV-AGRPFGLSV 91 (258)
Q Consensus 70 at~~Y~F~p~~~~-~~~p~~L~l 91 (258)
.+........-.| .|+.+.+..
T Consensus 103 ve~~~dla~~ydLs~gG~y~v~~ 125 (343)
T 2x3c_A 103 LTVQAEVSGLYDMSAQGQYSIRY 125 (343)
T ss_dssp EEEEEECTTTBTCCSCEEEEEEE
T ss_pred EEEEEehhhccccCCCceEEEEE
Confidence 6555555322222 456555543
No 33
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.61 E-value=71 Score=24.12 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=38.0
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNL 93 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l 93 (258)
..|++.+|.|.-.+.+...++|... .|.. ....+.-....++..+|.|.+ +..+.|.|.+
T Consensus 35 ~vg~~~~F~v~t~dag~~~l~v~v~-----~p~~------------~~~~v~d~~dGty~v~Y~p~~---~G~y~I~V~~ 94 (115)
T 2eea_A 35 VANKTATFTIVTEDAGEGGLDLAIE-----GPSK------------AEISCIDNKDGTCTVTYLPTL---PGDYSILVKY 94 (115)
T ss_dssp ETTCCEEEEEECSSCCSSCEEEEEE-----SSSC------------CEECCBCCSSSEEEEEEECSS---CSCEEEEEEE
T ss_pred EcCCeEEEEEEcccCCCCceEEEEE-----CCCC------------ceEEEEECCCCEEEEEEEeCC---CeeEEEEEEE
Confidence 5689999999999998888876543 3322 012334445567888888875 3445444433
No 34
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=44.11 E-value=42 Score=24.42 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=20.8
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDT 37 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~ 37 (258)
..|++.+|.|.-.+.|...++|..
T Consensus 20 ~~g~~~~F~v~~~~aG~~~l~v~v 43 (96)
T 1v05_A 20 FVGQKNSFTVDCSKAGTNMMMVGV 43 (96)
T ss_dssp CTTSCEEEEEECTTSBSCCEEEEE
T ss_pred EcCCCEEEEEEEeCCCCCcEEEEE
Confidence 679999999999999988887754
No 35
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=43.41 E-value=17 Score=27.64 Aligned_cols=81 Identities=21% Similarity=0.344 Sum_probs=51.6
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEE
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSV 91 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l 91 (258)
...-|++.+|.|...+.+..++++. +..|... .....|......++.-+|+|.+ ...+- |
T Consensus 12 ~~~vG~~~~ftv~~~~ag~~~l~v~-----v~~P~G~----------~~~~~v~d~~dGty~v~ytP~e---~G~h~--v 71 (102)
T 2dlg_A 12 VATVGSICDLNLKIPEINSSDMSAH-----VTSPSGR----------VTEAEIVPMGKNSHCVRFVPQE---MGVHT--V 71 (102)
T ss_dssp SBCSSSCBCCEEECTTSCGGGCEEE-----EECTTSC----------EEECEEEECSSSEEEEEBCCCT---TCEEE--E
T ss_pred cccCCCceEEEEEecCCCCCCEEEE-----EECCCCC----------EeeeEEEECCCCEEEEEEEecC---CEeEE--E
Confidence 4567888888888888787777444 4455431 2233455556678888898886 34454 4
Q ss_pred EEEEeecCCceeEEEEecceEEEEeecccccccccccCCCCcccccce
Q psy4382 92 NLQYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRPFGLSVNLQ 139 (258)
Q Consensus 92 ~l~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e~~~g~p~g~~i~~~ 139 (258)
.+.|.+ +.++|.||.+.|...
T Consensus 72 ~V~~~g---------------------------~~I~GSPF~v~V~~~ 92 (102)
T 2dlg_A 72 SVKYRG---------------------------QHVTGSPFQFTVGPL 92 (102)
T ss_dssp EEESSS---------------------------SBCSSCSEEEEBCCC
T ss_pred EEEECC---------------------------EeCCCCCeEEEECCC
Confidence 443333 457888988877653
No 36
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=42.78 E-value=54 Score=23.83 Aligned_cols=50 Identities=18% Similarity=0.274 Sum_probs=32.8
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
..|++.+|.|...+.|...++|... | |... ...+.-....++..+|.|.+
T Consensus 17 ~~g~~~~F~v~~~dag~~~~~v~v~-g----p~~~------------~~~v~d~~dGty~v~Y~p~~ 66 (94)
T 2w0p_A 17 EAGVPAEFSIWTREAGAGGLAIAVE-G----PSKA------------EISFEDRKDGSCGVAYVVQE 66 (94)
T ss_dssp ETTSCEEEEEECGGGCSCCEEEEEE-E----SSCC------------EEEEEECTTSCEEEEEECSS
T ss_pred EcCCCEEEEEEEcCCCCCcEEEEEE-C----CCCC------------eEEEEECCCCEEEEEEEECC
Confidence 4799999999999988888877543 2 3321 11233344467778888864
No 37
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=41.48 E-value=83 Score=23.99 Aligned_cols=54 Identities=15% Similarity=0.185 Sum_probs=34.0
Q ss_pred eeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 11 MDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 11 ~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
..+..|++..|.|...+. +.++++. +..|... .....|......++.-+|+|.+
T Consensus 22 ~~~~vg~~~~F~V~~~~a-~g~l~v~-----V~~P~g~----------~~~~~v~d~~~gty~v~ytP~~ 75 (112)
T 2d7p_A 22 TGLKVNQPASFAVQLNGA-RGVIDAR-----VHTPSGA----------VEECYVSELDSDKHTIRFIPHE 75 (112)
T ss_dssp BCCCTTCCEEEEEECTTC-CSCEEEE-----EECSSSC----------BCCCEECSCBTTEEEEEECCSS
T ss_pred CCcccCCcEEEEEEeCCC-CCCEEEE-----EECCCCC----------eeeeEEEeCCCCeEEEEEEcCC
Confidence 356789999999988776 4455443 3444321 1223444455668888888885
No 38
>3lso_A Putative membrane anchored protein; MCSG, PSI-2, structural genomic protein structure initiative; HET: MLZ; 2.75A {Corynebacterium diphtheriae} PDB: 3lso_B*
Probab=37.78 E-value=89 Score=30.17 Aligned_cols=75 Identities=21% Similarity=0.300 Sum_probs=52.0
Q ss_pred CceEEEEEEEEeCCCCcEEEEEEeeeeeccc-c---------------------cceEEEecceeeec--eeecCCceeE
Q psy4382 16 GSVVEFLVGFTNKGKQDFTLDTLDASLRYPM-D---------------------FNFYIQNFSTIIYN--RIVKPGHEAT 71 (258)
Q Consensus 16 G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~-d---------------------~~~~iqNfTa~~~~--~~V~pg~~at 71 (258)
+-...+-..|.+.|+..++-..+++.--.|. | |.- +-|.++..+. ..|.||++.+
T Consensus 245 dGvASLshTFdTaGs~~ITArY~GAeGF~p~pdG~ati~Vvt~~~a~k~~D~Dtytg-~ing~a~Sld~P~Kv~pG~~Vs 323 (489)
T 3lso_A 245 DNXASTSIIFDTSGSKTITARFIDAEGYNPAPDGETIIPVVTELDTKKPEDTDSYTG-LINGSATSLLKPAKVMPGEKVS 323 (489)
T ss_dssp TSEEEEEEECSSCEEEEEEEEEECSSSCCCSCCEEEEEEEESCCCCCCTTCCSEEEE-EETTBCCBTTBCEECCTTCEEE
T ss_pred CCceeeeeEEccCCCeEEEEEEecccccccCCCCceEEEEEEecCCCCCCCcccccc-eecceeeecccccccCCCCEEE
Confidence 3345667788888888888888776655541 1 222 3488888887 7899999999
Q ss_pred EEEEEeeCcccCCcceeEEEE
Q psy4382 72 LGYSFVPAEAVAGRPFGLSVN 92 (258)
Q Consensus 72 ~~Y~F~p~~~~~~~p~~L~l~ 92 (258)
+.-+..|+. -.=|-|.+-||
T Consensus 324 vsasl~Ps~-a~v~vyeigin 343 (489)
T 3lso_A 324 VSASLLPNK-APIRVYEIGIN 343 (489)
T ss_dssp EEEEEECSS-SSEEEEEEEEE
T ss_pred EEeeecCCC-CceEEEEeccC
Confidence 999999997 12233444444
No 39
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=36.99 E-value=22 Score=27.60 Aligned_cols=54 Identities=22% Similarity=0.381 Sum_probs=34.0
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
...-|++.+|.|...+.+..++++. +..|... .....|......++.-+|+|.+
T Consensus 26 ~~~vg~~~~f~v~~~~ag~~~l~v~-----v~~PsG~----------~~~~~v~~~~~g~y~v~ftP~e 79 (116)
T 2dmc_A 26 QVKLGSAADFLLDISETDLSSLTAS-----IKAPSGR----------DEPCLLKRLPNNHIGISFIPRE 79 (116)
T ss_dssp CCCTTSCEEEECCCSCCCSTTBCCE-----EECTTSC----------BCCEEEEEETTTEEEEEECCCS
T ss_pred ccccCCceEEEEEecCCCCCCEEEE-----EECCCCC----------EEeeEEEeCCCCeEEEEEEeCC
Confidence 3667899999998888777776443 4445421 1122233334557888888885
No 40
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=36.78 E-value=92 Score=24.43 Aligned_cols=57 Identities=11% Similarity=0.027 Sum_probs=37.2
Q ss_pred ceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEE-Ee----c--ceeee-ceeecCCceeEEE
Q psy4382 17 SVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYI-QN----F--STIIY-NRIVKPGHEATLG 73 (258)
Q Consensus 17 ~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~i-qN----f--Ta~~~-~~~V~pg~~at~~ 73 (258)
...-+-+.++|.++.+.++.+++...-.-......+ .| - ...+. +..||||++..|.
T Consensus 14 ~~~a~y~ti~N~g~~~~~Lv~v~S~~a~~velH~~~~~~~~~~gvm~M~~v~~i~ipag~~v~l~ 78 (120)
T 2k6w_A 14 PNAAAYLTLENPGDLPLRLVGARTPVAERVELHETFMREVEGKKVMGMRPVPFLEVPPKGRVELK 78 (120)
T ss_dssp SEEEECEEEECCSSSCEEEEECCCSSEEEEEEEEEEEEESSSSEEEEEEECSCEEECTTCEEEEC
T ss_pred CcEEEEEEEEeCCCCCcEEEEEECCCCCcEEEEEEEecCCccCCeeEEEEcCcEeECCCCEEecc
Confidence 567778899999999999999887643322222222 23 1 11222 5889999988774
No 41
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.71 E-value=94 Score=23.04 Aligned_cols=50 Identities=18% Similarity=0.285 Sum_probs=33.6
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
..|++.+|.|.-.+.|...++|...+ |..- ...+.-....++.-+|.|.+
T Consensus 25 ~vg~~~~F~v~t~dag~~~l~v~v~~-----p~~~------------~v~v~d~~dGty~v~Y~p~~ 74 (105)
T 2ee6_A 25 EAGVPAEFSIWTREAGAGGLSIAVEG-----PSKA------------EITFDDHKNGSCGVSYIAQE 74 (105)
T ss_dssp EBTSEEEECEECSSSCCCCEEEEEES-----SSCE------------EEEECCCCSSCCCEEEEESS
T ss_pred EcCCcEEEEEEECCCCCCcEEEEEEC-----CCCC------------EEEEEECCCCEEEEEEEECC
Confidence 46999999999999999888777432 4321 11334445567777777764
No 42
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=34.55 E-value=91 Score=24.21 Aligned_cols=77 Identities=18% Similarity=0.383 Sum_probs=48.3
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNL 93 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l 93 (258)
..|++.+|.|.-.+.+...++|.. . .|... ...+.-....|+.-+|.|.+ +..+ .|++
T Consensus 45 ~vg~~~~F~V~t~dag~~~l~v~v-~----gp~~~------------~~~v~d~~dGty~v~Y~p~~---~G~y--~I~V 102 (131)
T 2di9_A 45 LVGKPAEFTIDTKGAGTGGLGLTV-E----GPCEA------------KIECSDNGDGTCSVSYLPTK---PGEY--FVNI 102 (131)
T ss_dssp ETTSCEEEEEECTTTCSSCEEEEE-C----SSSCC------------EEEEEECSSSEEEEEEECSS---SSEE--EEEE
T ss_pred ccCCeEEEEEEEcCCCCCeeEEEE-E----ecCCc------------eEEEEECCCCEEEEEEEeCC---CeeE--EEEE
Confidence 468999999999998888887754 2 34321 11233334467778888864 3444 4444
Q ss_pred EEeecCCceeEEEEecceEEEEeecccccccccccCCCCcccccce
Q psy4382 94 QYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRPFGLSVNLQ 139 (258)
Q Consensus 94 ~Y~~~~~~~~~~~~~n~~v~~~t~~~~~~p~e~~~g~p~g~~i~~~ 139 (258)
.|.+ +.++|.||-+.|...
T Consensus 103 ~~~g---------------------------~~I~gSPF~v~V~~~ 121 (131)
T 2di9_A 103 LFEE---------------------------VHIPGSPFKADIEMP 121 (131)
T ss_dssp EESS---------------------------CBCTTCSEEEEEECC
T ss_pred EECC---------------------------EECCCcCEEEEECCC
Confidence 4433 457788887776654
No 43
>2e9g_A AP-1 complex subunit gamma-2; beta-sandwich, immunoglobulin-like fold, adaptin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.33 E-value=1.7e+02 Score=22.98 Aligned_cols=76 Identities=18% Similarity=0.200 Sum_probs=44.6
Q ss_pred ceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEEEEe
Q psy4382 17 SVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNLQYR 96 (258)
Q Consensus 17 ~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l~Y~ 96 (258)
..+.+.+.|+|+...+++=....++. |..+.--++-- -+..|+|+....+...+.-.-. .+.+..|++.+.|.
T Consensus 38 ~~~~i~~~~~N~s~~~it~f~fQaAV--PK~~kLqL~p~----Sg~~l~p~~~~~ItQ~~~i~n~-~~~~l~lR~klsY~ 110 (131)
T 2e9g_A 38 ALLLITITATNFSEGDVTHFICQAAV--PKSLQLQLQAP----SGNTVPARGGLPITQLFRILNP-NKAPLRLKLRLTYD 110 (131)
T ss_dssp TEEEEEEEEEECSSSCEEEEEEEEEC--CTTSCCEECCC----SCSEECTTTCCCBCCCEEEECT-TCCCCCEEEEEEEE
T ss_pred CeEEEEEEEEECCCCccccEEEEEEc--CcccEEEeeCC----CCCCcCCCCCCCEEEEEEEeCC-CCCCEEEEEEEEEE
Confidence 33556666666666555444444444 22221111111 2578888777666666644332 46789999999999
Q ss_pred ecC
Q psy4382 97 DEH 99 (258)
Q Consensus 97 ~~~ 99 (258)
.+.
T Consensus 111 ~~g 113 (131)
T 2e9g_A 111 HFH 113 (131)
T ss_dssp CSS
T ss_pred ECC
Confidence 886
No 44
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=34.23 E-value=74 Score=24.07 Aligned_cols=62 Identities=16% Similarity=0.252 Sum_probs=38.9
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNL 93 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l 93 (258)
..|++.+|.|.-.+.|...+.|... | |.. ....+.-....++.-+|.|.+ +..+ .|.+
T Consensus 25 ~vg~~~~F~V~t~dag~g~l~v~v~-g----p~~------------~~~~v~d~~dGty~v~Y~p~~---~G~y--~I~V 82 (111)
T 2di8_A 25 RTFEMSDFIVDTRDAGYGGISLAVE-G----PSK------------VDIQTEDLEDGTCKVSYFPTV---PGVY--IVST 82 (111)
T ss_dssp ETTCCEEEEEECTTTCBCCEEEEEE-S----SSC------------CCEECCBCTTSCEEEEECCCS---CSEE--EEEE
T ss_pred EcCCCEEEEEEECCCCCCceEEEEE-c----CCC------------ceEEEEECCCCEEEEEEEeCC---CeEE--EEEE
Confidence 5789999999999998877766543 2 322 122344445567888888864 3444 4555
Q ss_pred EEee
Q psy4382 94 QYRD 97 (258)
Q Consensus 94 ~Y~~ 97 (258)
.|.+
T Consensus 83 ~~~g 86 (111)
T 2di8_A 83 KFAD 86 (111)
T ss_dssp EESS
T ss_pred EECC
Confidence 4433
No 45
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=33.96 E-value=1.3e+02 Score=23.89 Aligned_cols=55 Identities=13% Similarity=0.067 Sum_probs=34.2
Q ss_pred EEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEE
Q psy4382 20 EFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSF 76 (258)
Q Consensus 20 ~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F 76 (258)
.--|.++|.++..+.+..=.=-+.+-...-.-|+.-=.+--.=.+.||+ +|.|+=
T Consensus 31 aY~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe--~f~YtS 85 (126)
T 1xvs_A 31 AYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKAND--EYTYSS 85 (126)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTC--EEEEEE
T ss_pred EEEEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCC--ceEEeC
Confidence 4467889999999888776655555444333343322222224689998 666653
No 46
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=32.45 E-value=1.9e+02 Score=29.49 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=47.5
Q ss_pred cCCceEEEEEEEEeCCCCcEE--EEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFT--LDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSV 91 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~t--V~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l 91 (258)
.-|++..+.|.|+|-=+.+++ +..++|+ -+++- ....+...|.||+++++...|+|-. ..+..|.+
T Consensus 596 ~v~~~l~a~vsf~NPL~~~L~~c~~~vEG~--------GL~~~-~~~~~~~~v~Pg~~~~~~~~~~P~~---~G~r~L~a 663 (695)
T 1g0d_A 596 VVWEPLTAYVSFTNPLPVPLKGGVFTLEGA--------GLLSA-TQIHVNGAVAPSGKVSVKLSFSPMR---TGVRKLLV 663 (695)
T ss_dssp ETTCCEEEEEEEECCSSSCEESCEEEEEET--------TTEEE-EEEECSSEECTTCEEEEEEEECCSS---CEEEEEEE
T ss_pred ccCCeEEEEEEEECCCCCcccceEEEEECC--------CCCcc-eEEecCCCcCCCCEEEEEEEEEcCC---ccceEEEE
Confidence 358899999999999877763 4455554 12323 2334534699999999999999985 44555666
Q ss_pred EE
Q psy4382 92 NL 93 (258)
Q Consensus 92 ~l 93 (258)
++
T Consensus 664 ~f 665 (695)
T 1g0d_A 664 DF 665 (695)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 47
>1rkl_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 4 kDa subunit; membrane protein; NMR {Synthetic} SCOP: f.23.30.1
Probab=32.45 E-value=50 Score=21.37 Aligned_cols=27 Identities=22% Similarity=0.119 Sum_probs=17.2
Q ss_pred CceeehhHHHHHHHHHHHHHHhhhhhhh
Q psy4382 167 DGETFFLYVFLGACVVLLLVIGQHFLYS 194 (258)
Q Consensus 167 D~q~iFLYlfL~a~~gll~y~~y~~~~~ 194 (258)
|-|+-.+- ..+|++..++.+.||++..
T Consensus 4 D~qL~~la-n~lG~~~~~LIvlYH~v~~ 30 (36)
T 1rkl_A 4 DEQLNSLA-ITFGIVMMTLIVIYHAVDS 30 (36)
T ss_dssp SCGGGHHH-HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence 44444443 3446667778889999873
No 48
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=32.15 E-value=1.5e+02 Score=23.58 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=33.8
Q ss_pred EEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEE
Q psy4382 20 EFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYS 75 (258)
Q Consensus 20 ~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~ 75 (258)
.-.|.+.|.++..+.+..=.=-+.+-...-.-|+.-=.+--.=.+.||+ +|.|+
T Consensus 32 aY~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe--~f~Yt 85 (127)
T 2f1e_A 32 AYSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGE--AFHYT 85 (127)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTC--EEEEE
T ss_pred EEEEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCC--ceEEe
Confidence 4467889999999888876666655544333343333222224689998 66664
No 49
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=31.75 E-value=1.6e+02 Score=23.91 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=34.7
Q ss_pred EEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEE
Q psy4382 20 EFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSF 76 (258)
Q Consensus 20 ~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F 76 (258)
.-.|.+.|.++..+.+..=.=-+.+-...-.-|+.-=.+--.=.+.||+ +|.|+=
T Consensus 36 aY~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe--~F~YtS 90 (139)
T 1xq4_A 36 AYTVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGE--TFEYTS 90 (139)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTC--EEEEEE
T ss_pred EEEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCC--ceEEcC
Confidence 4467889999999888876666665544333343333222224689999 677653
No 50
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=31.05 E-value=43 Score=25.38 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=37.5
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNL 93 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l 93 (258)
..|++.+|.|.-.+.+...+.|.. ..|.. ....+.-....++..+|.|.+ +-...|.+
T Consensus 25 ~vg~~~~F~V~t~dag~~~l~v~v-----~gp~~------------~~~~v~d~~dGty~V~Y~p~~-----~G~y~I~V 82 (111)
T 2d7o_A 25 MVNKPATFTIVTKDAGEGGLSLAV-----EGPSK------------AEITCKDNKDGTCTVSYLPTA-----PGDYSIIV 82 (111)
T ss_dssp ETTSCEEEEEECTTTCSSCBCCEE-----ESSSC------------CCBCCCCCSSSEEEEEECCSS-----CEEEEEEC
T ss_pred EcCCCEEEEEEECCCCCCcEEEEE-----ECCCC------------ceEEEEECCCCEEEEEEEeCC-----CeEEEEEE
Confidence 568999999999988877775543 23321 122344455568888888864 34445555
Q ss_pred EE
Q psy4382 94 QY 95 (258)
Q Consensus 94 ~Y 95 (258)
.|
T Consensus 83 ~~ 84 (111)
T 2d7o_A 83 RF 84 (111)
T ss_dssp BB
T ss_pred EE
Confidence 33
No 51
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=30.94 E-value=1.4e+02 Score=24.01 Aligned_cols=55 Identities=15% Similarity=0.143 Sum_probs=34.0
Q ss_pred EEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEE
Q psy4382 20 EFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSF 76 (258)
Q Consensus 20 ~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F 76 (258)
.-.|.+.|.++..+.+..=.=-+.+-...-.-|+.-=.+--.=.+.||+ +|.|+=
T Consensus 31 aY~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe--~F~YtS 85 (134)
T 1tza_A 31 SYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNT--AYQYTS 85 (134)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTE--EEEEEE
T ss_pred EEEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCC--ceEEcC
Confidence 4467889999999888876655555444333343322222224689998 677753
No 52
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=29.54 E-value=1.2e+02 Score=22.21 Aligned_cols=21 Identities=19% Similarity=0.192 Sum_probs=13.7
Q ss_pred cceeecCCceEEEEEEEEeCCCC
Q psy4382 9 INMDLPAGSVVEFLVGFTNKGKQ 31 (258)
Q Consensus 9 ~~~~l~~G~~~~~lv~~~N~g~~ 31 (258)
....++.|+++++ .++|.+..
T Consensus 38 ~~i~v~~G~~V~~--~~~n~d~~ 58 (112)
T 1iby_A 38 ETLVVKKGDAVKV--VVENKSPI 58 (112)
T ss_dssp CEEEEETTCEEEE--EEEECSSS
T ss_pred CEEEEeCCCEEEE--EEEECCCC
Confidence 4467788887665 45677653
No 53
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=29.25 E-value=2.3e+02 Score=22.96 Aligned_cols=86 Identities=17% Similarity=0.159 Sum_probs=50.9
Q ss_pred CCccceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeece--e-ecCCceeEEEEEEeeCccc
Q psy4382 6 GVYINMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNR--I-VKPGHEATLGYSFVPAEAV 82 (258)
Q Consensus 6 ~~~~~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~--~-V~pg~~at~~Y~F~p~~~~ 82 (258)
.+.+...+..|+++++.+.+.-+.+ +.-..++=.+++.....-+-.|-....... . +.+|+..++.+.|. ..|
T Consensus 59 ~G~~~~~~~~Ge~v~l~i~~~~~~~--i~~~v~G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~f~--l~L 134 (188)
T 2r5o_A 59 GVDFPPSLTGNQQTDFLMKVVFEYD--FDCVVPGILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKFSLP--VDL 134 (188)
T ss_dssp TEESCSSEETTCEEEEEEEEEESSC--EEEEEEEEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEEEEE--CCB
T ss_pred CCCEeeEEeCCCEEEEEEEEEECCc--CCccEEEEEEECCCCCEEEecCcccccccccccccCCCCEEEEEEEEe--ccc
Confidence 3444556788888888888877654 222223335555443222222211111112 2 68899878877775 579
Q ss_pred CCcceeEEEEEEE
Q psy4382 83 AGRPFGLSVNLQY 95 (258)
Q Consensus 83 ~~~p~~L~l~l~Y 95 (258)
.+..|-|.+.+.=
T Consensus 135 ~~G~Y~lsv~i~~ 147 (188)
T 2r5o_A 135 NSGDYLLSFGISA 147 (188)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCCeEEEEEEEec
Confidence 9999999888843
No 54
>1gyu_A Adapter-related protein complex 1 gamma 1 subunit; clathrin, golgi, adaptin, endocytosis, adaptor; 1.81A {Mus musculus} SCOP: b.1.10.2
Probab=28.48 E-value=2.3e+02 Score=22.64 Aligned_cols=38 Identities=11% Similarity=0.196 Sum_probs=28.2
Q ss_pred ceeecCCceeEEEEEEeeCcccCCcceeEEEEEEEeecC
Q psy4382 61 NRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNLQYRDEH 99 (258)
Q Consensus 61 ~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l~Y~~~~ 99 (258)
+..|+|+....+...+.-.-. .+.+..|++.+.|..+.
T Consensus 85 g~~L~p~~~~~ItQ~m~I~n~-~~~~l~LR~klsY~~~g 122 (140)
T 1gyu_A 85 SSVVPAFNTGTITQVIKVLNP-QKQQLRMRIKLTYNHKG 122 (140)
T ss_dssp CSCBCGGGCCCEEEEEEEECT-TCCCCCEEEEEEEEETT
T ss_pred CCccCCCCCCCEEEEEEEeCC-CCCCEEEEEEEEEEECC
Confidence 577888777677777754433 35779999999998886
No 55
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=27.91 E-value=2.4e+02 Score=28.87 Aligned_cols=67 Identities=19% Similarity=0.177 Sum_probs=47.1
Q ss_pred cCCceEEEEEEEEeCCCCcEE--EEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFT--LDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSV 91 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~t--V~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l 91 (258)
.-|++..+.|.|+|-=+.+++ +..++|+ -+++- ....+ ..|.||+++++...|+|-. ..+..|.+
T Consensus 641 ~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~--------GL~~~-~~~~~-~~v~pg~~~~~~~~~~P~~---~G~r~L~a 707 (731)
T 1ex0_A 641 VVGSDMTVTVQFTNPLKETLRNVWVHLDGP--------GVTRP-MKKMF-REIRPNSTVQWEEVCRPWV---SGHRKLIA 707 (731)
T ss_dssp BTTSCEEEEEEEECCSSSCEEEEEEEEEET--------TTEEE-EEEEE-EEECTTCEEEEEEEECCSS---CEEEEEEE
T ss_pred ccCCeEEEEEEEECCCCCcccceEEEEECC--------CCCce-eeEec-CccCCCCEEEEEEEEEecc---ccceEEEE
Confidence 459999999999999877763 4455664 12222 22334 4699999999999999985 45555666
Q ss_pred EE
Q psy4382 92 NL 93 (258)
Q Consensus 92 ~l 93 (258)
++
T Consensus 708 ~f 709 (731)
T 1ex0_A 708 SM 709 (731)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 56
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=27.33 E-value=62 Score=22.64 Aligned_cols=22 Identities=23% Similarity=0.164 Sum_probs=13.8
Q ss_pred ceeehhHHHHHHHHHHHHHHhh
Q psy4382 168 GETFFLYVFLGACVVLLLVIGQ 189 (258)
Q Consensus 168 ~q~iFLYlfL~a~~gll~y~~y 189 (258)
+..+-++++++|++||++.++.
T Consensus 4 ~~~vp~WiIi~svl~GLLLL~L 25 (54)
T 2l8s_A 4 PGRVPLWVILLSAFAGLLLLML 25 (54)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHH
T ss_pred CccCchHHHHHHHHHHHHHHHH
Confidence 3345667777777776665554
No 57
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=27.31 E-value=1.2e+02 Score=28.40 Aligned_cols=86 Identities=19% Similarity=0.186 Sum_probs=52.9
Q ss_pred eecCCceEEEEEEEEeCCCCcEEEEEEeeeeeccccc-----ceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcc
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDF-----NFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRP 86 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~-----~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p 86 (258)
-+..||.+.+-+.+.|+.... |..|..+|.--.+. ..+-........+..|.||.+.+..|...|..+=.-..
T Consensus 207 ~Y~pGE~I~v~v~I~N~S~k~--Vk~Ikv~L~Q~~~~~~~s~~~~k~~Va~~e~~~~V~~gs~~~~~~~L~P~l~p~~~~ 284 (393)
T 1g4m_A 207 IYYHGEPISVNVHVTNNTNKT--VKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREK 284 (393)
T ss_dssp EEETTCCEEEEEEEEECSSCC--EEEEEEEEEEEEEECSSBCEEEEEEEEEEEECCCBCTTEEEEEEEEECCCGGGTTTC
T ss_pred eEcCCCEEEEEEEEEcCCCCE--EeEEEEEEEEEEEEEEecCCceEEEEEEEecCCcCCCCCEEeeEEEEcCCCCCcccc
Confidence 357899999999999997644 45555555443211 12223333334455799999988888887765222233
Q ss_pred eeEEEEEEEeecC
Q psy4382 87 FGLSVNLQYRDEH 99 (258)
Q Consensus 87 ~~L~l~l~Y~~~~ 99 (258)
.||.|+-.+++++
T Consensus 285 ~~~aldg~lk~~d 297 (393)
T 1g4m_A 285 RGLALDGKLKHED 297 (393)
T ss_dssp SSEEESSCTTSTT
T ss_pred cceeeccccccCC
Confidence 5666655555555
No 58
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=26.65 E-value=94 Score=23.07 Aligned_cols=25 Identities=12% Similarity=0.014 Sum_probs=20.1
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEE
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDT 37 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~ 37 (258)
-..|++.+|.|...+.+...+.|..
T Consensus 24 ~~vg~~~~F~v~t~dag~g~l~v~v 48 (105)
T 2dic_A 24 AFTNKPNVFTVVTRGAGIGGLGITV 48 (105)
T ss_dssp EETTCCEEEEEECTTTCSSCEEEEE
T ss_pred eecCCcEEEEEEEccCCCCceEEEE
Confidence 3578999999999998887776654
No 59
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=26.54 E-value=1.3e+02 Score=24.70 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=18.1
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDT 37 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~ 37 (258)
..|++..|.|...+.+...++|..
T Consensus 111 ~vg~~~~F~V~t~dag~g~l~v~I 134 (188)
T 2k7p_A 111 VVNKPATFTVNTKDAGEGGLSLAI 134 (188)
T ss_dssp ETTSCEEEEEECTTCCSSCEEEEE
T ss_pred eeCccEEEEEEeCCCCCCCeEEEE
Confidence 467888888888888877777654
No 60
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=25.55 E-value=1.7e+02 Score=29.36 Aligned_cols=59 Identities=19% Similarity=0.341 Sum_probs=38.0
Q ss_pred CceEEEEEEEEeCCCCcE-EEEEEeeeeeccc----ccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 16 GSVVEFLVGFTNKGKQDF-TLDTLDASLRYPM----DFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 16 G~~~~~lv~~~N~g~~~~-tV~~i~gSl~~P~----d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
+..+++-|.++|.|+.+= -|+-+ -++.|. ....-++-|..+ .|.|||+.++...+.+++
T Consensus 612 ~~~~~vsv~VtNtG~~~G~EVvQl--Yv~~~~~~~~~P~k~L~gF~kv----~L~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 612 QNVATVTVDIANSGQVTGAEVAQL--YITYPSSAPRTPPKQLRGFAKL----NLTPGQSGTATFNIRRRD 675 (713)
T ss_dssp SEEEEEEEEEEECSSSCEEEEEEE--EEECCTTSSSCCSCEEEEEEEE----EECTTCEEEEEEEEEGGG
T ss_pred CCeEEEEEEEEeCCCCccceeeee--eeecCCCCCCchhHHhhhcccc----eeCCCCeEEEEEEEcHHH
Confidence 567899999999997332 12222 122332 112356666655 499999999999996553
No 61
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=24.77 E-value=44 Score=32.59 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=33.5
Q ss_pred ccceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceee-eceeecCCceeEEEEEEeeCc
Q psy4382 8 YINMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTII-YNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 8 ~~~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~-~~~~V~pg~~at~~Y~F~p~~ 80 (258)
++...+..|+. +.|.|.|+...+.+|..=+-....-+|-.-.+.|-+... -...|+||+ ++.|.|....
T Consensus 68 GP~I~~~~Gd~--v~v~~~N~l~~~~siH~HGl~~~~~~DG~~~~~~~~~~~~~~~~I~PG~--~~tY~f~~~~ 137 (647)
T 1sdd_B 68 GPVIRAEVDDV--IQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNK--TYTYVWHATT 137 (647)
T ss_dssp CCCEEEETTCE--EEEEECCCSSSCBCCEEETCC---------------------CCBCTTC--CEECCEECCT
T ss_pred CceEEEeCCCE--EEEEEEECCCCceEEecCcceeCCCCCCccccCCCCcccccCcccCCCC--eEEEEEECCc
Confidence 45556677775 567889999888766654433322234222332211111 135789998 5566775554
No 62
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=24.26 E-value=2.3e+02 Score=28.40 Aligned_cols=60 Identities=13% Similarity=0.288 Sum_probs=38.6
Q ss_pred CCceEEEEEEEEeCCC---CcEEEEEEe---eeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCc
Q psy4382 15 AGSVVEFLVGFTNKGK---QDFTLDTLD---ASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAE 80 (258)
Q Consensus 15 ~G~~~~~lv~~~N~g~---~~~tV~~i~---gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~ 80 (258)
.|..+++-|.++|.|+ ..+.-..+. ++...| ..-++-|..+ ..|.|||+.++...+.+.+
T Consensus 613 ~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P---~k~L~gF~kv---~~L~pGes~~V~~~l~~~~ 678 (721)
T 2x41_A 613 DGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKP---FQELKAFHKT---RLLNPGESEEVVLEIPVRD 678 (721)
T ss_dssp CSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCC---SCEEEEEEEC---CCBCTTCEEEEEEEEEGGG
T ss_pred CCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCc---hHHhhccccc---ccCCCCCeEEEEEEECHHH
Confidence 3677999999999997 333333332 222223 2345555543 1489999999999996653
No 63
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=24.25 E-value=1.9e+02 Score=25.08 Aligned_cols=27 Identities=11% Similarity=0.087 Sum_probs=20.7
Q ss_pred eecCCceEEEEEEEEeC-------CCCcEEEEEE
Q psy4382 12 DLPAGSVVEFLVGFTNK-------GKQDFTLDTL 38 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~-------g~~~~tV~~i 38 (258)
.-.+|++.+|.|...+. |...+.|...
T Consensus 17 ~~~~g~~~~F~v~~~da~G~~~~~g~~~~~v~i~ 50 (311)
T 1wlh_A 17 GGECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIE 50 (311)
T ss_dssp CEETTSCEEEEEECCSSSCC---CCCCCEEEEEE
T ss_pred CcccCCCEEEEEEEecCCCCEeccCCCeEEEEEE
Confidence 35789999999999988 6666665554
No 64
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=22.18 E-value=2.2e+02 Score=22.60 Aligned_cols=64 Identities=19% Similarity=0.374 Sum_probs=32.7
Q ss_pred cceeecCCceEEEEEEEEeCC-C--CcEEEEEEeeeeec-ccccceEEEecceeeeceeecCCceeEEEEEEee
Q psy4382 9 INMDLPAGSVVEFLVGFTNKG-K--QDFTLDTLDASLRY-PMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVP 78 (258)
Q Consensus 9 ~~~~l~~G~~~~~lv~~~N~g-~--~~~tV~~i~gSl~~-P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p 78 (258)
+...++.|+.++ +.++|.+ . -++.+...+..+.. |.+ ..++. . ..+-..|.||+..+..|.|.+
T Consensus 61 p~i~V~~GD~V~--~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~-~--~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 61 PTLEIPAGATVD--VTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVA-G--TGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp CEEEECTTCEEE--EEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEE-E--BCCCCCCBTTBEEEEEEEECC
T ss_pred CEEEEeCCCEEE--EEEEcCCCCeeeEEEEeecCcchhccccc-ccccc-c--cccccccCCCCceEEEEEEEE
Confidence 567889998655 5667864 2 33333321111111 111 11111 0 011237899998888888864
No 65
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=21.85 E-value=90 Score=21.72 Aligned_cols=20 Identities=15% Similarity=0.120 Sum_probs=12.7
Q ss_pred eehhHHHHHHHHHHHHHHhh
Q psy4382 170 TFFLYVFLGACVVLLLVIGQ 189 (258)
Q Consensus 170 ~iFLYlfL~a~~gll~y~~y 189 (258)
.+-+++++++++||++.++.
T Consensus 9 ~vp~wiIi~svl~GLllL~l 28 (54)
T 2knc_A 9 AIPIWWVLVGVLGGLLLLTI 28 (54)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHH
Confidence 35567777777776655553
No 66
>1iu1_A Gamma1-adaptin; coated PITS, endocytosis; 1.80A {Homo sapiens} SCOP: b.1.10.2
Probab=21.48 E-value=3.1e+02 Score=21.88 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=42.1
Q ss_pred EEEEEEEEeCCCCcEEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcceeEEEEEEEeec
Q psy4382 19 VEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNLQYRDE 98 (258)
Q Consensus 19 ~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~~L~l~l~Y~~~ 98 (258)
+.+.+.|+|+...+++=....++. |..+ -+|=... -+..|+|+.+..+...+.-.-. .+.+..|++.+.|..+
T Consensus 55 ~~i~~~f~N~s~~~it~f~fQaAV--PK~~--kLqL~pp--Sg~~L~p~~~~~ItQ~~~I~n~-~~~~lklR~klsY~~~ 127 (146)
T 1iu1_A 55 TVITIQASNSTELDMTDFVFQAAV--PKTF--QLQLLSP--SSSIVPAFNTGTITQVIKVLNP-QKQQLRMRIKLTYNHK 127 (146)
T ss_dssp EEEEEEEEECSSSCBEEEEEEEEC--CTTS--EEEECCC--SCSCBCGGGCCCEEEEEEEECT-TCCCCCCEEEEEEEET
T ss_pred EEEEEEEEeCCCCccccEEEEEEc--Cccc--EEEeeCC--CCCccCCCCCCCEEEEEEEeCC-CCCCEEEEEEEEEEEC
Confidence 455555566555554433333333 2221 1221111 2577888777677777754433 3577999999999888
Q ss_pred C
Q psy4382 99 H 99 (258)
Q Consensus 99 ~ 99 (258)
.
T Consensus 128 g 128 (146)
T 1iu1_A 128 G 128 (146)
T ss_dssp T
T ss_pred C
Confidence 6
No 67
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=20.64 E-value=3.2e+02 Score=25.80 Aligned_cols=85 Identities=16% Similarity=0.252 Sum_probs=53.1
Q ss_pred ecCCceEEEEEEEEeCCCCcEEEEEEeeeeeccccc-----ceEEEecceeeeceeecCCceeEEEEEEeeCcccCCcce
Q psy4382 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDF-----NFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEAVAGRPF 87 (258)
Q Consensus 13 l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~-----~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~~~~~p~ 87 (258)
...||.+.+-+.++|+...++ ..|..+++--.++ .++..-......+..|.||.+.+=.|+..|--.-...-.
T Consensus 224 Y~pGE~I~V~v~I~N~Ssk~V--k~Ikv~L~Q~~~v~l~s~~~y~~~Va~~E~~epV~pgst~~k~~~l~P~l~~n~~kr 301 (380)
T 3ugu_A 224 YYHGEPIPVTVAVTNSTEKTV--KKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERR 301 (380)
T ss_dssp EETTCCEEEEEEEEECSSSCE--EEEEEEEEEEEEECSSSCCEEEEEEEEEECSCCBCTTEEEEEEEEECCCGGGCSCCT
T ss_pred CcCCCEEEEEEEEEcCCCCeE--eEEEEEEEEEEEEEEecCCeEEEEEEEeccCCcCCCCCeEEeeEEEEEecccCCcee
Confidence 467999999999999998664 4445555544332 233332233344568899987666677776542222445
Q ss_pred eEEEEEEEeecC
Q psy4382 88 GLSVNLQYRDEH 99 (258)
Q Consensus 88 ~L~l~l~Y~~~~ 99 (258)
+|.|+-.+++++
T Consensus 302 glALdG~lk~ed 313 (380)
T 3ugu_A 302 GIALDGKIKHED 313 (380)
T ss_dssp TSCBSSCTTCTT
T ss_pred eEEecceeccCC
Confidence 666666666665
No 68
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=20.59 E-value=2.8e+02 Score=20.97 Aligned_cols=64 Identities=16% Similarity=0.185 Sum_probs=37.0
Q ss_pred ceeecCCceEEEEEEEEeCCCCcEEEEEEeeeeeccccc------c-eEEEe-----cceeeeceeecCCceeEEEEEEe
Q psy4382 10 NMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDF------N-FYIQN-----FSTIIYNRIVKPGHEATLGYSFV 77 (258)
Q Consensus 10 ~~~l~~G~~~~~lv~~~N~g~~~~tV~~i~gSl~~P~d~------~-~~iqN-----fTa~~~~~~V~pg~~at~~Y~F~ 77 (258)
..++..|- ..-|.++|.+..++ ..-.=.|..|... + .+-|. ++...++..|+||...+|.|.-.
T Consensus 14 ~~~W~~Gf--~~~vtVtN~g~~~i--~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~~la~G~s~~fGf~~~ 89 (110)
T 1exg_A 14 VNQWNTGF--TANVTVKNTSSAPV--DGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGGTAQFGFNGS 89 (110)
T ss_dssp EEESSSEE--EEEEEEEECSSSCE--ESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGGEECSSEEEEEEEEEE
T ss_pred eCCCCCCE--EEEEEEEeCCCCcc--cceEEEEEcCCCcEEecccceEEEccCCEEEEecccccceeCCCcEEEEEEEEe
Confidence 34566664 56678999998665 2222233333211 0 11121 23345778899999999888764
No 69
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=20.47 E-value=98 Score=24.56 Aligned_cols=75 Identities=11% Similarity=0.065 Sum_probs=45.3
Q ss_pred eecCCceEEEEEEEEeCCCCc---EEEEEEeeeeecccccceEEEecceeeeceeecCCceeEEEEEEeeCcc----cCC
Q psy4382 12 DLPAGSVVEFLVGFTNKGKQD---FTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYSFVPAEA----VAG 84 (258)
Q Consensus 12 ~l~~G~~~~~lv~~~N~g~~~---~tV~~i~gSl~~P~d~~~~iqNfTa~~~~~~V~pg~~at~~Y~F~p~~~----~~~ 84 (258)
....|+.++|-+.+.|.|..+ +.|..--+ .|..-+..+...+. -.|.||++.++..++.+... .++
T Consensus 11 ~p~~g~~vTvsatVkN~Gt~~s~a~~V~~yl~---~p~~gg~~vgt~tv----~~LaaG~s~t~~v~~~~~~~~~~~a~~ 83 (122)
T 2kut_A 11 TPFEGEEITVSARVTNRGAAEAHNVPVAVYLG---NPAQGGVEIGRDTI----SRIPVGGTGLARVQWKATRKLAGRAAN 83 (122)
T ss_dssp SCCTTCEEEEEEEEECCSSSCBCCCCEEECSS---CTTTCCCCCBCCCC----SCBCTTCEEECCEEEECCCCCSSCCSC
T ss_pred CCCCCCeEEEEEEEEeCCCcccCcEEEEEEeC---CCccCCeEEeeEEc----cccCCCCeEEEEEEEecCCcccccccC
Confidence 357899999999999999643 33333222 23322234444331 46999999998777765431 123
Q ss_pred cceeEEEEE
Q psy4382 85 RPFGLSVNL 93 (258)
Q Consensus 85 ~p~~L~l~l 93 (258)
..|.|..-+
T Consensus 84 Gsy~v~AvV 92 (122)
T 2kut_A 84 PGVPVYAVV 92 (122)
T ss_dssp CCCCCCEEE
T ss_pred ceEEEEEEE
Confidence 445555444
No 70
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=20.20 E-value=1.6e+02 Score=23.90 Aligned_cols=24 Identities=17% Similarity=0.277 Sum_probs=16.7
Q ss_pred cCCceEEEEEEEEeCCCCcEEEEE
Q psy4382 14 PAGSVVEFLVGFTNKGKQDFTLDT 37 (258)
Q Consensus 14 ~~G~~~~~lv~~~N~g~~~~tV~~ 37 (258)
..|++.+|.|...+.|..+++|..
T Consensus 111 ~~g~~~~F~V~t~dag~g~l~v~V 134 (191)
T 2k7q_A 111 HTFEPAEFIIDTRDAGYGGLSLSI 134 (191)
T ss_dssp ESSSCEEEEEECGGGCSEEEEEEE
T ss_pred ecCCcEEEEEEeCCCCCCceEEEE
Confidence 356777888887777776666553
Done!