Your job contains 1 sequence.
>psy4382
MIKEHGVYINMDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIY
NRIVKPGHEATLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIITLGYS
FVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYVFLGAC
VVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKNLTNSP
KSPSVHKIDMIPTSQYLK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4382
(258 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028327 - symbol:l(1)G0320 "lethal (1) G0320" spec... 342 3.0e-33 2
UNIPROTKB|F1P4F4 - symbol:SSR1 "Uncharacterized protein" ... 337 1.4e-30 1
UNIPROTKB|F1RW78 - symbol:SSR1 "Uncharacterized protein" ... 331 6.2e-30 1
UNIPROTKB|A6QLP7 - symbol:SSR1 "Translocon-associated pro... 331 6.2e-30 1
UNIPROTKB|P16967 - symbol:SSR1 "Translocon-associated pro... 331 6.2e-30 1
RGD|1310961 - symbol:Ssr1 "signal sequence receptor, alph... 331 6.2e-30 1
UNIPROTKB|C9IZQ1 - symbol:SSR1 "Translocon-associated pro... 330 7.9e-30 1
UNIPROTKB|E9PAL7 - symbol:SSR1 "Translocon-associated pro... 330 7.9e-30 1
MGI|MGI:105082 - symbol:Ssr1 "signal sequence receptor, a... 330 7.9e-30 1
UNIPROTKB|P43307 - symbol:SSR1 "Translocon-associated pro... 330 7.9e-30 1
UNIPROTKB|C9J5W0 - symbol:SSR1 "Translocon-associated pro... 330 7.9e-30 1
UNIPROTKB|C9J3L8 - symbol:SSR1 "Translocon-associated pro... 330 7.9e-30 1
UNIPROTKB|F5H5Y2 - symbol:SSR1 "Translocon-associated pro... 324 3.4e-29 1
ZFIN|ZDB-GENE-030826-28 - symbol:ssr1 "signal sequence re... 319 1.2e-28 1
WB|WBGene00022122 - symbol:trap-1 species:6239 "Caenorhab... 260 2.1e-22 1
UNIPROTKB|C9JBX5 - symbol:SSR1 "Translocon-associated pro... 250 2.4e-21 1
UNIPROTKB|C9JY01 - symbol:SSR1 "Translocon-associated pro... 245 8.0e-21 1
DICTYBASE|DDB_G0283497 - symbol:ssr1 "translocon-associat... 223 1.7e-18 1
TAIR|locus:2047077 - symbol:AT2G21160 species:3702 "Arabi... 110 0.00057 1
>FB|FBgn0028327 [details] [associations]
symbol:l(1)G0320 "lethal (1) G0320" species:7227 "Drosophila
melanogaster" [GO:0005048 "signal sequence binding" evidence=ISS]
[GO:0005785 "signal recognition particle receptor complex"
evidence=ISS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0045169 "fusome" evidence=IDA] InterPro:IPR005595 Pfam:PF03896
GO:GO:0005783 GO:GO:0005811 EMBL:AE014298 GO:GO:0045169
eggNOG:NOG127973 KO:K13249 GeneTree:ENSGT00400000022103 OMA:RERHTEV
EMBL:AY069541 RefSeq:NP_572567.1 UniGene:Dm.2084 STRING:Q9W335
EnsemblMetazoa:FBtr0071372 GeneID:326234 KEGG:dme:Dmel_CG32701
UCSC:CG32701-RA FlyBase:FBgn0028327 InParanoid:Q9W335
OrthoDB:EOG4VDNFH ChiTaRS:l(1)G0320 GenomeRNAi:326234
NextBio:847768 Uniprot:Q9W335
Length = 302
Score = 342 (125.4 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 59/104 (56%), Positives = 82/104 (78%)
Query: 11 MDLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEA 70
+DLP G VEFL+GFTNKG ++F ++T++AS RYPMDFN++IQNFS + YNR VKPG E+
Sbjct: 85 LDLPGGKPVEFLIGFTNKGAEEFVIETVEASFRYPMDFNYFIQNFSAVAYNREVKPGFES 144
Query: 71 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNI 114
T+ Y+F+P++ AGRPFGL++ L YRD + + E ++NETV I
Sbjct: 145 TVSYTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLI 188
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 69/140 (49%), Positives = 92/140 (65%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T+ Y+F+P++ AGRPFGL++ L YRD + + E ++NETV I E+DEGLDGETFFLYV
Sbjct: 145 TVSYTFLPSDQFAGRPFGLNIALAYRDANGIQYNEAVFNETVLISEVDEGLDGETFFLYV 204
Query: 176 FLGACVVLLLVIGQHFLY-SVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLK 234
L VVLLLVIGQ +L S GK++ A K+ +ETGT N IDYDW+P+E+L +L+
Sbjct: 205 LLAGIVVLLLVIGQQYLLGSSGKRKRAAA---KKVIETGTANDSTIDYDWVPQETLRALQ 261
Query: 235 NLTNSPKSPSVHKIDMIPTS 254
K+P P S
Sbjct: 262 KSPPKSKTPKTSPKPTKPAS 281
Score = 36 (17.7 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 111 TVNIITLGYSFVPAEAV 127
T N T+ Y +VP E +
Sbjct: 241 TANDSTIDYDWVPQETL 257
>UNIPROTKB|F1P4F4 [details] [associations]
symbol:SSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
GeneTree:ENSGT00400000022103 OMA:ETIFMYV EMBL:AADN02036587
IPI:IPI00586034 Ensembl:ENSGALT00000020881 Uniprot:F1P4F4
Length = 288
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 58/104 (55%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 96 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 155
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL YRD + N F + ++N+TV II
Sbjct: 156 FEYSFIPAEPMGGRPFGLVINLNYRDANGNMFQDAVFNQTVTII 199
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 60/126 (47%), Positives = 83/126 (65%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL YRD + N F + ++N+TV IIE ++GLDGET F+Y+
Sbjct: 155 TFEYSFIPAEPMGGRPFGLVINLNYRDANGNMFQDAVFNQTVTIIEKEDGLDGETIFMYM 214
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+++G H L +KR + Q VE GT N D+D WIP+E+LN +
Sbjct: 215 FL-AGLGLLVIVGLHQLLE-SRKR----KRPVQKVEMGTSNQNDVDMSWIPQETLNQINK 268
Query: 236 LTNSPK 241
SP+
Sbjct: 269 A--SPR 272
>UNIPROTKB|F1RW78 [details] [associations]
symbol:SSR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
GeneTree:ENSGT00400000022103 OMA:ETIFMYV EMBL:CU469365
Ensembl:ENSSSCT00000001115 Uniprot:F1RW78
Length = 285
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 57/104 (54%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV II
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTII 197
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 62/128 (48%), Positives = 85/128 (66%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV IIE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LLLV+G H L +KR + Q VETGT + D+D WIP+E+LN +
Sbjct: 213 FL-AGLGLLLVVGLHQLLE-SRKR----KRPIQKVETGTSSQNDVDMSWIPQETLNQINK 266
Query: 236 LTNSPKSP 243
SP+ P
Sbjct: 267 A--SPRRP 272
>UNIPROTKB|A6QLP7 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9913 "Bos taurus" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0016021
GO:GO:0005789 eggNOG:NOG127973 KO:K13249 EMBL:BC148041
IPI:IPI00713850 RefSeq:NP_001095592.1 UniGene:Bt.13194
STRING:A6QLP7 PRIDE:A6QLP7 Ensembl:ENSBTAT00000008253 GeneID:529312
KEGG:bta:529312 CTD:6745 GeneTree:ENSGT00400000022103
HOGENOM:HOG000006932 HOVERGEN:HBG009736 InParanoid:A6QLP7
OMA:RERHTEV OrthoDB:EOG4M0F2V NextBio:20875010 Uniprot:A6QLP7
Length = 286
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 57/104 (54%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV II
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTII 197
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 59/126 (46%), Positives = 83/126 (65%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV IIE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+V+G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 213 FL-AGLGLLVVVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQINK 266
Query: 236 LTNSPK 241
SP+
Sbjct: 267 A--SPR 270
>UNIPROTKB|P16967 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9615 "Canis lupus familiaris" [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR005595 Pfam:PF03896
GO:GO:0016021 GO:GO:0005789 eggNOG:NOG127973 KO:K13249 CTD:6745
HOGENOM:HOG000006932 HOVERGEN:HBG009736 OrthoDB:EOG4M0F2V
EMBL:X51367 PIR:S08993 RefSeq:NP_001003270.1 UniGene:Cfa.1295
ProteinModelPortal:P16967 STRING:P16967 GeneID:403951
KEGG:cfa:403951 NextBio:20817441 Uniprot:P16967
Length = 286
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 57/104 (54%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV II
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTII 197
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 59/126 (46%), Positives = 83/126 (65%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV IIE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTIIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+V+G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 213 FL-AGLGLLVVVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQINK 266
Query: 236 LTNSPK 241
SP+
Sbjct: 267 A--SPR 270
>RGD|1310961 [details] [associations]
symbol:Ssr1 "signal sequence receptor, alpha" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR005595 Pfam:PF03896 RGD:1310961 GO:GO:0016021
GO:GO:0005789 eggNOG:NOG127973 HOGENOM:HOG000006932
HOVERGEN:HBG009736 OMA:RERHTEV OrthoDB:EOG4M0F2V EMBL:AY321345
IPI:IPI00364884 UniGene:Rn.123918 IntAct:Q7TPJ0 STRING:Q7TPJ0
PRIDE:Q7TPJ0 Ensembl:ENSRNOT00000051192 UCSC:RGD:1310961
InParanoid:Q7TPJ0 ArrayExpress:Q7TPJ0 Genevestigator:Q7TPJ0
GermOnline:ENSRNOG00000014165 Uniprot:Q7TPJ0
Length = 319
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 57/104 (54%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N IV P +AT
Sbjct: 95 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTIVPPQRQAT 154
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 155 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 198
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 56/118 (47%), Positives = 80/118 (67%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 154 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 213
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSL 233
FL A + LL+V+G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 214 FL-AGLGLLVVVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQI 265
>UNIPROTKB|C9IZQ1 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
EMBL:AL139095 HOGENOM:HOG000006932 OrthoDB:EOG4M0F2V
HGNC:HGNC:11323 ChiTaRS:SSR1 OMA:ETIFMYV IPI:IPI00945633
ProteinModelPortal:C9IZQ1 STRING:C9IZQ1 Ensembl:ENST00000474597
ArrayExpress:C9IZQ1 Bgee:C9IZQ1 Uniprot:C9IZQ1
Length = 298
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 197
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 57/128 (44%), Positives = 82/128 (64%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+++G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 213 FL-AGLGLLVIVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQIMQ 266
Query: 236 LTNSPKSP 243
SP
Sbjct: 267 SRRDKASP 274
>UNIPROTKB|E9PAL7 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
EMBL:AL139095 HGNC:HGNC:11323 ChiTaRS:SSR1 IPI:IPI00946839
Ensembl:ENST00000397511 ArrayExpress:E9PAL7 Bgee:E9PAL7
Uniprot:E9PAL7
Length = 291
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 197
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 57/128 (44%), Positives = 82/128 (64%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+++G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 213 FL-AGLGLLVIVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQIMQ 266
Query: 236 LTNSPKSP 243
SP
Sbjct: 267 SRRDKASP 274
>MGI|MGI:105082 [details] [associations]
symbol:Ssr1 "signal sequence receptor, alpha" species:10090
"Mus musculus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR005595 Pfam:PF03896
MGI:MGI:105082 GO:GO:0016021 GO:GO:0005789 eggNOG:NOG127973
KO:K13249 CTD:6745 GeneTree:ENSGT00400000022103
HOGENOM:HOG000006932 HOVERGEN:HBG009736 OrthoDB:EOG4M0F2V
EMBL:AF326229 EMBL:AF395811 EMBL:AK010884 EMBL:AK166235
EMBL:AK167793 EMBL:BC011255 IPI:IPI00755329 RefSeq:NP_080241.3
UniGene:Mm.426670 UniGene:Mm.490298 ProteinModelPortal:Q9CY50
IntAct:Q9CY50 STRING:Q9CY50 PhosphoSite:Q9CY50 PaxDb:Q9CY50
PRIDE:Q9CY50 Ensembl:ENSMUST00000021864 GeneID:107513
KEGG:mmu:107513 UCSC:uc011yyk.1 OMA:ETIFMYV NextBio:358946
Bgee:Q9CY50 CleanEx:MM_SSR1 Genevestigator:Q9CY50
GermOnline:ENSMUSG00000021427 Uniprot:Q9CY50
Length = 286
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 197
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 58/128 (45%), Positives = 84/128 (65%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+V+G H L +KR + Q VE GT + D+D WIP+E+LN + N
Sbjct: 213 FL-AGLGLLVVVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQI-N 265
Query: 236 LTNSPKSP 243
+ + P
Sbjct: 266 KASPRRQP 273
>UNIPROTKB|P43307 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006613 "cotranslational protein targeting to
membrane" evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0006987 "activation of signaling
protein activity involved in unfolded protein response"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_17015 InterPro:IPR005595
Pfam:PF03896 GO:GO:0016021 Reactome:REACT_116125 GO:GO:0006987
GO:GO:0005789 GO:GO:0006412 GO:GO:0008284 GO:GO:0006614
EMBL:AL139095 eggNOG:NOG127973 KO:K13249 CTD:6745
HOVERGEN:HBG009736 EMBL:Z12830 EMBL:AF156965 EMBL:BT007387
EMBL:AK291550 EMBL:CR456961 EMBL:AK222762 EMBL:AK222809
EMBL:AK075562 EMBL:BC007710 IPI:IPI00301021 IPI:IPI00449669
PIR:I38246 RefSeq:NP_003135.2 UniGene:Hs.114033
ProteinModelPortal:P43307 IntAct:P43307 MINT:MINT-1379984
STRING:P43307 PhosphoSite:P43307 DMDM:22261821 PaxDb:P43307
PeptideAtlas:P43307 PRIDE:P43307 DNASU:6745 Ensembl:ENST00000244763
GeneID:6745 KEGG:hsa:6745 UCSC:uc003mxf.4 GeneCards:GC06M007232
HGNC:HGNC:11323 HPA:HPA011276 HPA:HPA017062 MIM:600868
neXtProt:NX_P43307 PharmGKB:PA36147 PhylomeDB:P43307 ChiTaRS:SSR1
GenomeRNAi:6745 NextBio:26310 ArrayExpress:P43307 Bgee:P43307
Genevestigator:P43307 GermOnline:ENSG00000124783 Uniprot:P43307
Length = 286
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 197
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 57/126 (45%), Positives = 83/126 (65%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+++G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 213 FL-AGLGLLVIVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQINK 266
Query: 236 LTNSPK 241
SP+
Sbjct: 267 A--SPR 270
>UNIPROTKB|C9J5W0 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
EMBL:AL139095 HOGENOM:HOG000006932 HGNC:HGNC:11323 ChiTaRS:SSR1
IPI:IPI00945795 ProteinModelPortal:C9J5W0 STRING:C9J5W0
Ensembl:ENST00000479365 ArrayExpress:C9J5W0 Bgee:C9J5W0
Uniprot:C9J5W0
Length = 266
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 197
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 55/118 (46%), Positives = 80/118 (67%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSL 233
FL A + LL+++G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 213 FL-AGLGLLVIVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQI 264
>UNIPROTKB|C9J3L8 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
EMBL:AL139095 HOGENOM:HOG000006932 HGNC:HGNC:11323 ChiTaRS:SSR1
IPI:IPI00946676 ProteinModelPortal:C9J3L8 STRING:C9J3L8
Ensembl:ENST00000462112 ArrayExpress:C9J3L8 Bgee:C9J3L8
Uniprot:C9J3L8
Length = 265
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 94 DFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQAT 153
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 154 FEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 197
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 40/77 (51%), Positives = 58/77 (75%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 153 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 212
Query: 176 FLGACVVLLLVIGQHFL 192
FL A + LL+++G H L
Sbjct: 213 FL-AGLGLLVIVGLHQL 228
>UNIPROTKB|F5H5Y2 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IDA] EMBL:AL139095 IPI:IPI01018736 PRIDE:F5H5Y2
Ensembl:ENST00000534851 HGNC:HGNC:11323 ChiTaRS:SSR1
ArrayExpress:F5H5Y2 Bgee:F5H5Y2 GO:GO:0005783 InterPro:IPR005595
Pfam:PF03896 Uniprot:F5H5Y2
Length = 259
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 55/102 (53%), Positives = 77/102 (75%)
Query: 14 PAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLG 73
PA ++V+FLVGFTNKG +DF +++LDAS RYP D+ FYIQNF+ + N +V P +AT
Sbjct: 69 PANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFE 128
Query: 74 YSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 129 YSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 170
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 57/126 (45%), Positives = 83/126 (65%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+
Sbjct: 126 TFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYM 185
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL A + LL+++G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 186 FL-AGLGLLVIVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQINK 239
Query: 236 LTNSPK 241
SP+
Sbjct: 240 A--SPR 243
>ZFIN|ZDB-GENE-030826-28 [details] [associations]
symbol:ssr1 "signal sequence receptor, alpha"
species:7955 "Danio rerio" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0042221 "response to chemical stimulus"
evidence=IDA] InterPro:IPR005595 Pfam:PF03896
ZFIN:ZDB-GENE-030826-28 GO:GO:0005783 GO:GO:0042221
eggNOG:NOG127973 KO:K13249 CTD:6745 HOGENOM:HOG000006932
HOVERGEN:HBG009736 OrthoDB:EOG4M0F2V EMBL:BC056339 EMBL:AY115484
IPI:IPI00500645 RefSeq:NP_958484.1 UniGene:Dr.77292 STRING:Q8AWW3
GeneID:373100 KEGG:dre:373100 NextBio:20813368 Uniprot:Q8AWW3
Length = 290
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 54/103 (52%), Positives = 76/103 (73%)
Query: 12 DLPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEAT 71
D PA ++V+FL+GF+NKG ++F +++LDAS RYP DF FYIQNF+ + +V P +AT
Sbjct: 98 DFPANNIVKFLLGFSNKGSENFVVESLDASFRYPQDFQFYIQNFTALQLGTLVPPQRQAT 157
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNI 114
YSF+PAE + GRPFGL +NL YRD+ N F + ++N+TV I
Sbjct: 158 FEYSFIPAEPMGGRPFGLVINLNYRDDSGNVFQDAVFNQTVTI 200
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 63/128 (49%), Positives = 83/128 (64%)
Query: 116 TLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYV 175
T YSF+PAE + GRPFGL +NL YRD+ N F + ++N+TV I E ++GLDGET F+YV
Sbjct: 157 TFEYSFIPAEPMGGRPFGLVINLNYRDDSGNVFQDAVFNQTVTITEREDGLDGETIFMYV 216
Query: 176 FLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKN 235
FL + LLLVIG H L K+R A+ VE GT N D+D WIP+E+LN + N
Sbjct: 217 FLSG-LGLLLVIGLHQLLESRKRRRPAAK-----VEMGTSNHNDVDMSWIPQETLNQI-N 269
Query: 236 LTNSPKSP 243
+ +SP
Sbjct: 270 KASPRRSP 277
>WB|WBGene00022122 [details] [associations]
symbol:trap-1 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783 GO:GO:0009792
EMBL:FO081820 eggNOG:NOG127973 KO:K13249
GeneTree:ENSGT00400000022103 HOGENOM:HOG000006932
RefSeq:NP_491076.1 ProteinModelPortal:Q95XT5 STRING:Q95XT5
PaxDb:Q95XT5 EnsemblMetazoa:Y71F9AM.6.1 EnsemblMetazoa:Y71F9AM.6.2
GeneID:171865 KEGG:cel:CELE_Y71F9AM.6 UCSC:Y71F9AM.6.1 CTD:171865
WormBase:Y71F9AM.6 InParanoid:Q95XT5 OMA:QTINIME NextBio:873021
Uniprot:Q95XT5
Length = 257
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 56/152 (36%), Positives = 84/152 (55%)
Query: 99 HNNFFYEGIYNETV---NIITLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNE 155
H F G YN V +TL Y F E AGRP GL VN+ Y+D N F +YN+
Sbjct: 105 HLQNFTRGEYNRRVAPKEEVTLDYGFYAHETFAGRPVGLVVNVHYQDADGNVFVNNVYNQ 164
Query: 156 TVNIIEIDEGLDGETFFLYVFLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTK 215
T+NI+E D G GET FL++F A + L + FL + +K + SK++ VE GT
Sbjct: 165 TINIMEDDSGFSGETGFLFIFFVALSIGGLYLSNQFLSKLSRK---SGLSKRRVVEQGT- 220
Query: 216 NSKDIDYDWIPKESLNSLKNLTNSPKSPSVHK 247
S ++D++WIP++++ + + + + SP K
Sbjct: 221 -SSEVDFEWIPRDAVKNKEKRSPATVSPKARK 251
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 45/100 (45%), Positives = 64/100 (64%)
Query: 16 GSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGYS 75
G V++L+GF NKG++DF + + S R+P D ++++QNF+ YNR V P E TL Y
Sbjct: 70 GKPVKYLIGFQNKGEKDFVVKYAETSFRFPTDHSYHLQNFTRGEYNRRVAPKEEVTLDYG 129
Query: 76 FVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
F E AGRP GL VN+ Y+D N F +YN+T+NI+
Sbjct: 130 FYAHETFAGRPVGLVVNVHYQDADGNVFVNNVYNQTINIM 169
>UNIPROTKB|C9JBX5 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
EMBL:AL139095 HOGENOM:HOG000006932 HGNC:HGNC:11323 ChiTaRS:SSR1
IPI:IPI00946008 STRING:C9JBX5 Ensembl:ENST00000489567
ArrayExpress:C9JBX5 Bgee:C9JBX5 Uniprot:C9JBX5
Length = 218
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 51/117 (43%), Positives = 76/117 (64%)
Query: 125 EAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYVFLGACVVLL 184
E + GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+FL A + LL
Sbjct: 94 EPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFL-AGLGLL 152
Query: 185 LVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSLKNLTNSPK 241
+++G H L +KR + Q VE GT + D+D WIP+E+LN + SP+
Sbjct: 153 VIVGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQINKA--SPR 202
>UNIPROTKB|C9JY01 [details] [associations]
symbol:SSR1 "Translocon-associated protein subunit alpha"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
EMBL:AL139095 HGNC:HGNC:11323 ChiTaRS:SSR1 IPI:IPI01018736
ProteinModelPortal:C9JY01 STRING:C9JY01 Ensembl:ENST00000479485
ArrayExpress:C9JY01 Bgee:C9JY01 Uniprot:C9JY01
Length = 103
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 48/107 (44%), Positives = 72/107 (67%)
Query: 127 VAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEGLDGETFFLYVFLGACVVLLLV 186
+ GRPFGL +NL Y+D + N F + ++N+TV +IE ++GLDGET F+Y+FL A + LL++
Sbjct: 1 MGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFL-AGLGLLVI 59
Query: 187 IGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWIPKESLNSL 233
+G H L +KR + Q VE GT + D+D WIP+E+LN +
Sbjct: 60 VGLHQLLE-SRKR----KRPIQKVEMGTSSQNDVDMSWIPQETLNQI 101
Score = 101 (40.6 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 82 VAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNII 115
+ GRPFGL +NL Y+D + N F + ++N+TV +I
Sbjct: 1 MGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVI 34
>DICTYBASE|DDB_G0283497 [details] [associations]
symbol:ssr1 "translocon-associated protein TRAP alpha
subunit" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005595 Pfam:PF03896
dictyBase:DDB_G0283497 GO:GO:0016021 GO:GO:0045335
GenomeReviews:CM000153_GR GO:GO:0005789 EMBL:AAFI02000055
eggNOG:NOG127973 RefSeq:XP_639046.1 STRING:Q54R45
EnsemblProtists:DDB0266492 GeneID:8624071 KEGG:ddi:DDB_G0283497
OMA:ELAVIYL ProtClustDB:CLSZ2430364 Uniprot:Q54R45
Length = 236
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 47/107 (43%), Positives = 66/107 (61%)
Query: 15 AGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTIIYNRIVKPGHEATLGY 74
AGSVVE LVGFTN + + + ASL +P DF+ +IQN++ + V+ GH ATL Y
Sbjct: 55 AGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQNYTRGDFGIAVEKGHHATLAY 114
Query: 75 SFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIITLGYSF 121
FVP+E + R FGL ++L+Y+D NF + +N T+NI SF
Sbjct: 115 RFVPSEYLEPREFGLLISLEYQDGAQNFT-QTFFNSTINITEKETSF 160
Score = 139 (54.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 49/143 (34%), Positives = 72/143 (50%)
Query: 106 GIYNETVNIITLGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIIEIDEG 165
GI E + TL Y FVP+E + R FGL ++L+Y+D NF + +N T+NI E +
Sbjct: 101 GIAVEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFT-QTFFNSTINITEKETS 159
Query: 166 LDGETFFLYVFLGACVVLLLVIGQHFLYSVGKKRVGTAQSKKQTVETGTKNSKDIDYDWI 225
D ++FFL + LG V IG + +Y GK Q K +TV KN+ ++ +
Sbjct: 160 FDMDSFFL-ILLGLGFVG--GIG-YIVY--GKM---PKQKKVRTVSKVNKNAVRVETEDE 210
Query: 226 PKESLNSLKNLTNSPKSPSVHKI 248
E L+ S K SV K+
Sbjct: 211 TAEWLSGTS--AASSKVKSVQKV 231
>TAIR|locus:2047077 [details] [associations]
symbol:AT2G21160 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005783
"endoplasmic reticulum" evidence=IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005773 "vacuole"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR005595 Pfam:PF03896 GO:GO:0005783
GO:GO:0016021 GO:GO:0005886 GO:GO:0005794 GO:GO:0005774
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0009535
EMBL:AC006264 EMBL:AY050351 EMBL:L32016 IPI:IPI00520482 PIR:H84597
RefSeq:NP_565498.1 UniGene:At.20513 STRING:P45434 PaxDb:P45434
PRIDE:P45434 EnsemblPlants:AT2G21160.1 GeneID:816651
KEGG:ath:AT2G21160 TAIR:At2g21160 eggNOG:NOG127973
HOGENOM:HOG000242079 InParanoid:P45434 KO:K13249 OMA:VDISWIP
PhylomeDB:P45434 ProtClustDB:CLSN2715711 Genevestigator:P45434
GermOnline:AT2G21160 Uniprot:P45434
Length = 258
Score = 110 (43.8 bits), Expect = 0.00057, P = 0.00057
Identities = 33/127 (25%), Positives = 56/127 (44%)
Query: 13 LPAGSVVEFLVGFTNKGKQDFTLDTLDASLRYPMDFNFYIQNFSTI-IYNRIVKPGHEAT 71
+PAG E LVG N+GK + + AS+ P D +QN + + + N + +AT
Sbjct: 78 VPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTMLRLNNASIPTSLQAT 137
Query: 72 LGYSFVPAEAVAGRPFGLSVNLQYRDEHNNFFYEGIYNETVNIITLGYSFVPAEAVAGRP 131
Y F ++ + F L + Y D + YN T+ ++ G + E+V
Sbjct: 138 FPYIFAVSQYLQPGAFDLVGYIIY-DVEGKPYQSVFYNGTIEVVESG-GLLSGESVFLLT 195
Query: 132 FGLSVNL 138
G+ + L
Sbjct: 196 LGIGLLL 202
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 258 258 0.00087 114 3 11 22 0.46 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 580 (62 KB)
Total size of DFA: 178 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.52u 0.11s 22.63t Elapsed: 00:00:05
Total cpu time: 22.52u 0.11s 22.63t Elapsed: 00:00:05
Start: Thu Aug 15 14:45:46 2013 End: Thu Aug 15 14:45:51 2013