Your job contains 1 sequence.
>psy4383
MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISMHKGYAFIQFSNPHDARSACLGED
GRTVLGQTLVSYKLQYYNGCRYVSPTPTT
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4383
(89 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0259935 - symbol:CG42458 species:7227 "Drosophila ... 167 2.2e-11 1
UNIPROTKB|E1BT73 - symbol:RALY "Uncharacterized protein" ... 133 5.9e-09 1
UNIPROTKB|Q5QPM1 - symbol:RALY "RNA-binding protein Raly"... 131 9.7e-09 1
UNIPROTKB|Q5QPM2 - symbol:RALY "RNA-binding protein Raly"... 131 9.7e-09 1
UNIPROTKB|Q5QPL9 - symbol:RALY "RNA-binding protein Raly"... 131 1.7e-08 1
UNIPROTKB|F1P0I8 - symbol:RALY "Uncharacterized protein" ... 133 1.9e-08 1
ZFIN|ZDB-GENE-041010-127 - symbol:raly "RNA binding prote... 130 3.6e-08 1
UNIPROTKB|Q9UKM9 - symbol:RALY "RNA-binding protein Raly"... 131 3.7e-08 1
UNIPROTKB|E9PTI6 - symbol:Raly "Protein Raly" species:101... 128 6.7e-08 1
UNIPROTKB|E2R552 - symbol:RALY "Uncharacterized protein" ... 128 7.2e-08 1
RGD|1307228 - symbol:Raly "RNA binding protein, autoantig... 128 7.3e-08 1
UNIPROTKB|F1S4Y9 - symbol:RALY "Uncharacterized protein" ... 128 9.3e-08 1
ZFIN|ZDB-GENE-040426-2043 - symbol:hnrnpc "heterogeneous ... 126 1.4e-07 1
UNIPROTKB|B4DSU6 - symbol:HNRNPC "Heterogeneous nuclear r... 120 1.4e-07 1
UNIPROTKB|G3V251 - symbol:HNRNPC "Heterogeneous nuclear r... 120 1.4e-07 1
UNIPROTKB|G3V3K6 - symbol:HNRNPC "Heterogeneous nuclear r... 120 1.4e-07 1
UNIPROTKB|G3V555 - symbol:HNRNPC "Heterogeneous nuclear r... 120 1.4e-07 1
UNIPROTKB|G3V575 - symbol:HNRNPC "Heterogeneous nuclear r... 120 1.4e-07 1
UNIPROTKB|G3V5X6 - symbol:HNRNPC "Heterogeneous nuclear r... 120 1.4e-07 1
UNIPROTKB|Q5E952 - symbol:RALY "Uncharacterized protein" ... 125 1.4e-07 1
ZFIN|ZDB-GENE-040426-791 - symbol:zgc:55733 "zgc:55733" s... 123 2.5e-07 1
UNIPROTKB|G3V576 - symbol:HNRNPC "Heterogeneous nuclear r... 120 2.9e-07 1
UNIPROTKB|G3V4W0 - symbol:HNRNPC "Heterogeneous nuclear r... 120 4.2e-07 1
UNIPROTKB|B4DY08 - symbol:HNRNPC "cDNA FLJ53542, highly s... 120 5.3e-07 1
UNIPROTKB|G3V4C1 - symbol:HNRNPC "Heterogeneous nuclear r... 120 5.5e-07 1
UNIPROTKB|Q3SX47 - symbol:HNRPC "Heterogeneous nuclear ri... 120 5.6e-07 1
UNIPROTKB|G3V2Q1 - symbol:HNRNPC "Heterogeneous nuclear r... 120 6.0e-07 1
UNIPROTKB|P07910 - symbol:HNRNPC "Heterogeneous nuclear r... 120 6.1e-07 1
UNIPROTKB|I3LK71 - symbol:HNRNPC "Uncharacterized protein... 120 6.1e-07 1
MGI|MGI:107795 - symbol:Hnrnpc "heterogeneous nuclear rib... 120 6.4e-07 1
RGD|6491888 - symbol:LOC100911576 "heterogeneous nuclear ... 120 6.4e-07 1
UNIPROTKB|D4ACR0 - symbol:Hnrnpc "Heterogeneous nuclear r... 120 7.2e-07 1
UNIPROTKB|E2RLQ4 - symbol:HNRNPC "Uncharacterized protein... 120 7.3e-07 1
UNIPROTKB|J9NYT3 - symbol:HNRNPCL1 "Uncharacterized prote... 115 2.0e-06 1
UNIPROTKB|E5RG71 - symbol:RALYL "RNA-binding Raly-like pr... 107 3.4e-06 1
UNIPROTKB|E2QWT4 - symbol:E2QWT4 "Uncharacterized protein... 106 4.3e-06 1
UNIPROTKB|I3LRX6 - symbol:LOC100523119 "Uncharacterized p... 106 4.3e-06 1
UNIPROTKB|J9NU79 - symbol:HNRNPC "Uncharacterized protein... 110 7.0e-06 1
UNIPROTKB|B3KT61 - symbol:RALYL "cDNA FLJ37707 fis, clone... 107 1.4e-05 1
UNIPROTKB|Q86SE5 - symbol:RALYL "RNA-binding Raly-like pr... 107 1.5e-05 1
MGI|MGI:1924147 - symbol:Ralyl "RALY RNA binding protein-... 107 1.5e-05 1
UNIPROTKB|G3V129 - symbol:RALYL "Putative uncharacterized... 107 1.6e-05 1
UNIPROTKB|E1BUB9 - symbol:E1BUB9 "Uncharacterized protein... 106 1.9e-05 1
UNIPROTKB|Q08DJ0 - symbol:RALYL "RNA-binding Raly-like pr... 106 1.9e-05 1
UNIPROTKB|O60812 - symbol:HNRNPCL1 "Heterogeneous nuclear... 104 3.2e-05 1
SGD|S000003482 - symbol:YGR250C "Putative RNA binding pro... 68 4.3e-05 2
UNIPROTKB|Q49AS9 - symbol:TIAL1 "Nucleolysin TIAR" specie... 66 5.7e-05 2
ZFIN|ZDB-GENE-040426-1547 - symbol:tial1 "TIA1 cytotoxic ... 68 0.00011 2
UNIPROTKB|D4A964 - symbol:Tial1 "Protein Tial1" species:1... 66 0.00016 2
UNIPROTKB|F1LQ36 - symbol:Tial1 "Protein Tial1" species:1... 66 0.00016 2
UNIPROTKB|Q01085 - symbol:TIAL1 "Nucleolysin TIAR" specie... 66 0.00017 2
UNIPROTKB|F2Z4H8 - symbol:TIAL1 "Uncharacterized protein"... 66 0.00017 2
UNIPROTKB|F1NY49 - symbol:374274 "Uncharacterized protein... 66 0.00018 2
UNIPROTKB|F1NS94 - symbol:374274 "Uncharacterized protein... 66 0.00018 2
UNIPROTKB|E2RA41 - symbol:TIAL1 "Uncharacterized protein"... 66 0.00019 2
UNIPROTKB|F2Z5F9 - symbol:LOC100736782 "Uncharacterized p... 66 0.00019 2
MGI|MGI:107913 - symbol:Tial1 "Tia1 cytotoxic granule-ass... 66 0.00019 2
RGD|1595845 - symbol:Tial1 "Tia1 cytotoxic granule-associ... 66 0.00019 2
RGD|1305742 - symbol:Tia1 "TIA1 cytotoxic granule-associa... 67 0.00021 2
UNIPROTKB|D4A6U8 - symbol:Tia1 "Protein Tia1" species:101... 67 0.00022 2
MGI|MGI:107914 - symbol:Tia1 "cytotoxic granule-associate... 66 0.00029 2
POMBASE|SPBC23E6.01c - symbol:SPBC23E6.01c "mRNA processi... 65 0.00076 2
TAIR|locus:2039975 - symbol:RS31a "arginine/serine-rich s... 63 0.00097 2
>FB|FBgn0259935 [details] [associations]
symbol:CG42458 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR007087 InterPro:IPR012677 InterPro:IPR015880
Pfam:PF00076 PROSITE:PS00028 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 EMBL:AE014296 GO:GO:0000166 GO:GO:0008270
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005622
GeneTree:ENSGT00390000006718 RefSeq:NP_996010.2
ProteinModelPortal:Q7KU81 SMR:Q7KU81 STRING:Q7KU81
EnsemblMetazoa:FBtr0300248 GeneID:2768945 KEGG:dme:Dmel_CG42458
UCSC:CG42458-RA FlyBase:FBgn0259935 InParanoid:Q7KU81 OMA:RRSANNE
PhylomeDB:Q7KU81 ChiTaRS:CG42458 GenomeRNAi:2768945 NextBio:848749
ArrayExpress:Q7KU81 Bgee:Q7KU81 Uniprot:Q7KU81
Length = 711
Score = 167 (63.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 28 VLGQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
+ G+ GISMHKGYAF+QF+NP DAR+AC GEDG+TVL QTL
Sbjct: 43 IYGRLAGISMHKGYAFVQFTNPFDARNACHGEDGKTVLSQTL 84
Score = 154 (59.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
MHKGYAF+QF+NP DAR+AC GEDG+TVL QTL ++M
Sbjct: 52 MHKGYAFVQFTNPFDARNACHGEDGKTVLSQTLDVNM 88
>UNIPROTKB|E1BT73 [details] [associations]
symbol:RALY "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000006718 EMBL:AADN02019478 EMBL:AADN02019479
EMBL:AADN02019480 IPI:IPI00577610 ProteinModelPortal:E1BT73
Ensembl:ENSGALT00000003194 Uniprot:E1BT73
Length = 179
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+SN AR+A LGE+GR + GQTL
Sbjct: 46 GRVVGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTL 85
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+SN AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
>UNIPROTKB|Q5QPM1 [details] [associations]
symbol:RALY "RNA-binding protein Raly" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000231958
HOVERGEN:HBG002302 EMBL:AL031668 UniGene:Hs.136947 HGNC:HGNC:15921
ChiTaRS:RALY EMBL:AL034549 IPI:IPI00641351 SMR:Q5QPM1 STRING:Q5QPM1
Ensembl:ENST00000448364 Uniprot:Q5QPM1
Length = 181
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q+SN AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTL 85
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+SN AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
>UNIPROTKB|Q5QPM2 [details] [associations]
symbol:RALY "RNA-binding protein Raly" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL031668
UniGene:Hs.136947 HGNC:HGNC:15921 ChiTaRS:RALY EMBL:AL034549
IPI:IPI00640938 SMR:Q5QPM2 MINT:MINT-1399328 STRING:Q5QPM2
Ensembl:ENST00000413297 Uniprot:Q5QPM2
Length = 89
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q+SN AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTL 85
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+SN AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
>UNIPROTKB|Q5QPL9 [details] [associations]
symbol:RALY "RNA-binding protein Raly" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000231958
HOVERGEN:HBG002302 EMBL:AL031668 UniGene:Hs.136947 HGNC:HGNC:15921
ChiTaRS:RALY EMBL:AL034549 IPI:IPI00642213 SMR:Q5QPL9 STRING:Q5QPL9
Ensembl:ENST00000442805 Uniprot:Q5QPL9
Length = 237
Score = 131 (51.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q+SN AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTL 85
Score = 125 (49.1 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+SN AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
>UNIPROTKB|F1P0I8 [details] [associations]
symbol:RALY "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013 InterPro:IPR017347
PIRSF:PIRSF037992 GeneTree:ENSGT00390000006718 OMA:QTRDDGD
EMBL:AADN02019478 EMBL:AADN02019479 EMBL:AADN02019480
IPI:IPI00819673 Ensembl:ENSGALT00000040421 Uniprot:F1P0I8
Length = 285
Score = 133 (51.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+SN AR+A LGE+GR + GQTL
Sbjct: 48 GRVVGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTL 87
Score = 125 (49.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+SN AR+A LGE+GR + GQTL I+M
Sbjct: 55 VHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 91
>ZFIN|ZDB-GENE-041010-127 [details] [associations]
symbol:raly "RNA binding protein, autoantigenic
(hnRNP-associated with lethal yellow homolog (mouse))" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-041010-127 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOVERGEN:HBG002302 InterPro:IPR017347
PIRSF:PIRSF037992 CTD:22913 KO:K12895 EMBL:AY398405 IPI:IPI00491006
RefSeq:NP_991173.1 UniGene:Dr.133570 ProteinModelPortal:Q6TGV1
SMR:Q6TGV1 GeneID:402903 KEGG:dre:402903 InParanoid:Q6TGV1
NextBio:20816720 ArrayExpress:Q6TGV1 Uniprot:Q6TGV1
Length = 273
Score = 130 (50.8 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ LG S+HKGYAF+Q++N AR A +GE+GR + GQTL
Sbjct: 46 GRVLGCSVHKGYAFVQYANERHARGAVIGENGRVLAGQTL 85
Score = 119 (46.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q++N AR A +GE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYANERHARGAVIGENGRVLAGQTLDINM 89
>UNIPROTKB|Q9UKM9 [details] [associations]
symbol:RALY "RNA-binding protein Raly" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0000398 GO:GO:0071013 eggNOG:NOG250746 HOVERGEN:HBG002302
InterPro:IPR017347 PIRSF:PIRSF037992 EMBL:AL031668 EMBL:AF148457
EMBL:L38696 EMBL:BC105018 IPI:IPI00011268 IPI:IPI00216044
RefSeq:NP_031393.2 RefSeq:NP_057951.1 UniGene:Hs.136947 PDB:1WF1
PDBsum:1WF1 ProteinModelPortal:Q9UKM9 SMR:Q9UKM9 IntAct:Q9UKM9
MINT:MINT-2869971 STRING:Q9UKM9 PhosphoSite:Q9UKM9 DMDM:25091115
PaxDb:Q9UKM9 PRIDE:Q9UKM9 Ensembl:ENST00000246194
Ensembl:ENST00000375114 GeneID:22913 KEGG:hsa:22913 UCSC:uc002xab.3
UCSC:uc002xac.3 CTD:22913 GeneCards:GC20P032581 HGNC:HGNC:15921
HPA:HPA040971 HPA:HPA043614 MIM:614663 neXtProt:NX_Q9UKM9
PharmGKB:PA34201 InParanoid:Q9UKM9 KO:K12895 OMA:QTRDDGD
PhylomeDB:Q9UKM9 ChiTaRS:RALY EvolutionaryTrace:Q9UKM9
GenomeRNAi:22913 NextBio:43589 ArrayExpress:Q9UKM9 Bgee:Q9UKM9
CleanEx:HS_RALY Genevestigator:Q9UKM9 GermOnline:ENSG00000125970
Uniprot:Q9UKM9
Length = 306
Score = 131 (51.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q+SN AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTL 85
Score = 125 (49.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+SN AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
>UNIPROTKB|E9PTI6 [details] [associations]
symbol:Raly "Protein Raly" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1307228 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR017347 PIRSF:PIRSF037992 GeneTree:ENSGT00390000006718
IPI:IPI00373147 Ensembl:ENSRNOT00000023429 Uniprot:E9PTI6
Length = 285
Score = 128 (50.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q++N AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYANERHARAAVLGENGRVLAGQTL 85
Score = 122 (48.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q++N AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYANERHARAAVLGENGRVLAGQTLDINM 89
>UNIPROTKB|E2R552 [details] [associations]
symbol:RALY "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
InterPro:IPR017347 PIRSF:PIRSF037992 GeneTree:ENSGT00390000006718
CTD:22913 KO:K12895 OMA:QTRDDGD EMBL:AAEX03013901
RefSeq:XP_542969.2 ProteinModelPortal:E2R552
Ensembl:ENSCAFT00000039408 GeneID:485845 KEGG:cfa:485845
NextBio:20859748 Uniprot:E2R552
Length = 293
Score = 128 (50.1 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q++N AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYANERHARAAVLGENGRVLAGQTL 85
Score = 122 (48.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q++N AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYANERHARAAVLGENGRVLAGQTLDINM 89
>RGD|1307228 [details] [associations]
symbol:Raly "RNA binding protein, autoantigenic
(hnRNP-associated with lethal yellow homolog (mouse))"
species:10116 "Rattus norvegicus" [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1307228
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474050
eggNOG:NOG250746 HOGENOM:HOG000231958 HOVERGEN:HBG002302
InterPro:IPR017347 PIRSF:PIRSF037992 CTD:22913 KO:K12895
IPI:IPI00373147 EMBL:BC087074 RefSeq:NP_001011958.1
UniGene:Rn.162714 SMR:Q5PQR0 GeneID:296301 KEGG:rno:296301
UCSC:RGD:1307228 NextBio:640965 Genevestigator:Q5PQR0
Uniprot:Q5PQR0
Length = 295
Score = 128 (50.1 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q++N AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYANERHARAAVLGENGRVLAGQTL 85
Score = 122 (48.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q++N AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYANERHARAAVLGENGRVLAGQTLDINM 89
>UNIPROTKB|F1S4Y9 [details] [associations]
symbol:RALY "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
InterPro:IPR017347 PIRSF:PIRSF037992 GeneTree:ENSGT00390000006718
OMA:QTRDDGD EMBL:CU062552 Ensembl:ENSSSCT00000007960 Uniprot:F1S4Y9
Length = 328
Score = 128 (50.1 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q++N AR+A LGE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYANERHARAAVLGENGRVLAGQTL 85
Score = 122 (48.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q++N AR+A LGE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYANERHARAAVLGENGRVLAGQTLDINM 89
>ZFIN|ZDB-GENE-040426-2043 [details] [associations]
symbol:hnrnpc "heterogeneous nuclear
ribonucleoprotein C" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2043
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000231958
HOVERGEN:HBG002302 InterPro:IPR017347 PIRSF:PIRSF037992 CTD:3183
GeneTree:ENSGT00390000006718 EMBL:CR376839 EMBL:BC044458
EMBL:BC097078 IPI:IPI00868250 RefSeq:NP_998244.1 UniGene:Dr.20495
SMR:Q803J4 Ensembl:ENSDART00000075905 GeneID:406352 KEGG:dre:406352
InParanoid:Q803J4 OMA:KNDNSEE NextBio:20817970 Uniprot:Q803J4
Length = 313
Score = 126 (49.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+QF+ +AR+A GEDGR V+GQ L
Sbjct: 51 GKIVGCSVHKGYAFVQFAQERNARTAVQGEDGRMVVGQVL 90
Score = 115 (45.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+QF+ +AR+A GEDGR V+GQ L +++
Sbjct: 58 VHKGYAFVQFAQERNARTAVQGEDGRMVVGQVLDVNL 94
>UNIPROTKB|B4DSU6 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:AL135744 HOGENOM:HOG000231958 HOVERGEN:HBG002302
UniGene:Hs.508848 UniGene:Hs.708738 HGNC:HGNC:5035 ChiTaRS:HNRNPC
EMBL:AK299923 IPI:IPI00910718 SMR:B4DSU6 STRING:B4DSU6
Ensembl:ENST00000557442 Uniprot:B4DSU6
Length = 147
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V251 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 HGNC:HGNC:5035 ChiTaRS:HNRNPC
ProteinModelPortal:G3V251 SMR:G3V251 Ensembl:ENST00000554891
ArrayExpress:G3V251 Bgee:G3V251 Uniprot:G3V251
Length = 126
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V3K6 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 HGNC:HGNC:5035 ChiTaRS:HNRNPC
ProteinModelPortal:G3V3K6 SMR:G3V3K6 Ensembl:ENST00000556226
ArrayExpress:G3V3K6 Bgee:G3V3K6 Uniprot:G3V3K6
Length = 121
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V555 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 HGNC:HGNC:5035 ChiTaRS:HNRNPC
ProteinModelPortal:G3V555 SMR:G3V555 Ensembl:ENST00000555137
ArrayExpress:G3V555 Bgee:G3V555 Uniprot:G3V555
Length = 175
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V575 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 HGNC:HGNC:5035 ChiTaRS:HNRNPC
ProteinModelPortal:G3V575 SMR:G3V575 Ensembl:ENST00000555215
ArrayExpress:G3V575 Bgee:G3V575 Uniprot:G3V575
Length = 187
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V5X6 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 HGNC:HGNC:5035 ChiTaRS:HNRNPC
ProteinModelPortal:G3V5X6 SMR:G3V5X6 Ensembl:ENST00000555176
ArrayExpress:G3V5X6 Bgee:G3V5X6 Uniprot:G3V5X6
Length = 117
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|Q5E952 [details] [associations]
symbol:RALY "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
HOGENOM:HOG000231958 HOVERGEN:HBG002302 InterPro:IPR017347
PIRSF:PIRSF037992 GeneTree:ENSGT00390000006718 CTD:22913 KO:K12895
OMA:QTRDDGD EMBL:DAAA02036492 EMBL:BT021068 IPI:IPI00839224
RefSeq:NP_001014847.1 UniGene:Bt.42846 SMR:Q5E952
Ensembl:ENSBTAT00000044331 GeneID:504640 KEGG:bta:504640
InParanoid:Q5E952 OrthoDB:EOG405S24 NextBio:20866769 Uniprot:Q5E952
Length = 283
Score = 125 (49.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKGYAF+Q++N AR+A +GE+GR + GQTL
Sbjct: 46 GRVAGCSVHKGYAFVQYANERHARAAVVGENGRVLAGQTL 85
Score = 119 (46.9 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q++N AR+A +GE+GR + GQTL I+M
Sbjct: 53 VHKGYAFVQYANERHARAAVVGENGRVLAGQTLDINM 89
>ZFIN|ZDB-GENE-040426-791 [details] [associations]
symbol:zgc:55733 "zgc:55733" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-791
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000231958
HOVERGEN:HBG002302 InterPro:IPR017347 PIRSF:PIRSF037992 KO:K12884
EMBL:BC046891 IPI:IPI00503713 RefSeq:NP_957287.1 UniGene:Dr.81689
ProteinModelPortal:Q802Y4 SMR:Q802Y4 PRIDE:Q802Y4 GeneID:393968
KEGG:dre:393968 NextBio:20814939 ArrayExpress:Q802Y4 Bgee:Q802Y4
Uniprot:Q802Y4
Length = 289
Score = 123 (48.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 21/40 (52%), Positives = 32/40 (80%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q++N +AR+A GEDGR ++GQ L
Sbjct: 51 GKIVGCSVHKGFAFVQYANERNARAAVNGEDGRMIVGQVL 90
Score = 113 (44.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q++N +AR+A GEDGR ++GQ L I++
Sbjct: 58 VHKGFAFVQYANERNARAAVNGEDGRMIVGQVLDINL 94
>UNIPROTKB|G3V576 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 HGNC:HGNC:5035 ChiTaRS:HNRNPC SMR:G3V576
Ensembl:ENST00000556142 Ensembl:ENST00000556513 Uniprot:G3V576
Length = 231
Score = 120 (47.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V4W0 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 InterPro:IPR017347 PIRSF:PIRSF037992 HGNC:HGNC:5035
ChiTaRS:HNRNPC ProteinModelPortal:G3V4W0 SMR:G3V4W0
Ensembl:ENST00000554383 ArrayExpress:G3V4W0 Bgee:G3V4W0
Uniprot:G3V4W0
Length = 262
Score = 120 (47.3 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|B4DY08 [details] [associations]
symbol:HNRNPC "cDNA FLJ53542, highly similar to
Heterogeneous nuclear ribonucleoproteins C" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 EMBL:AL135744
HOVERGEN:HBG002302 InterPro:IPR017347 PIRSF:PIRSF037992
UniGene:Hs.508848 UniGene:Hs.708738 HGNC:HGNC:5035 ChiTaRS:HNRNPC
EMBL:AK302213 IPI:IPI00909232 SMR:B4DY08 IntAct:B4DY08
STRING:B4DY08 Ensembl:ENST00000336053 Ensembl:ENST00000553753
UCSC:uc001wae.3 Uniprot:B4DY08
Length = 288
Score = 120 (47.3 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V4C1 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 InterPro:IPR017347 PIRSF:PIRSF037992 HGNC:HGNC:5035
ChiTaRS:HNRNPC ProteinModelPortal:G3V4C1 SMR:G3V4C1
Ensembl:ENST00000555914 ArrayExpress:G3V4C1 Bgee:G3V4C1
Uniprot:G3V4C1
Length = 292
Score = 120 (47.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|Q3SX47 [details] [associations]
symbol:HNRPC "Heterogeneous nuclear ribonucleoprotein C
(C1/C2)" species:9913 "Bos taurus" [GO:0045120 "pronucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0045120
HOGENOM:HOG000231958 HOVERGEN:HBG002302 InterPro:IPR017347
PIRSF:PIRSF037992 CTD:3183 eggNOG:NOG311712 KO:K12884 OMA:FSSPVEM
OrthoDB:EOG45490H GeneTree:ENSGT00390000006718 EMBL:DAAA02028318
EMBL:DAAA02028317 EMBL:BC104494 IPI:IPI00697568
RefSeq:NP_001029567.1 UniGene:Bt.10199 SMR:Q3SX47
Ensembl:ENSBTAT00000001668 GeneID:510852 KEGG:bta:510852
InParanoid:Q3SX47 NextBio:20869651 Uniprot:Q3SX47
Length = 294
Score = 120 (47.3 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|G3V2Q1 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 InterPro:IPR017347 PIRSF:PIRSF037992 HGNC:HGNC:5035
ChiTaRS:HNRNPC ProteinModelPortal:G3V2Q1 SMR:G3V2Q1
Ensembl:ENST00000555309 ArrayExpress:G3V2Q1 Bgee:G3V2Q1
Uniprot:G3V2Q1
Length = 305
Score = 120 (47.3 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|P07910 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0003723 "RNA
binding" evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0042802 "identical protein binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654 PDB:3LN4
PDBsum:3LN4 GO:GO:0000166 Reactome:REACT_1675 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:CH471078 GO:GO:0000398 GO:GO:0071013
HOVERGEN:HBG002302 InterPro:IPR017347 PIRSF:PIRSF037992 EMBL:M29063
EMBL:M16342 EMBL:BX161480 EMBL:BX247961 EMBL:BX247992 EMBL:AB209527
EMBL:AK223517 EMBL:BC003394 EMBL:BC007052 EMBL:BC008364
EMBL:BC008423 EMBL:BC066932 EMBL:BC089438 EMBL:BC108658
EMBL:BC103758 IPI:IPI00216592 IPI:IPI00477313 IPI:IPI00759596
IPI:IPI00759822 PIR:A26885 PIR:C34504 RefSeq:NP_001070910.1
RefSeq:NP_001070911.1 RefSeq:NP_004491.2 RefSeq:NP_112604.2
UniGene:Hs.508848 UniGene:Hs.708738 PDB:1TXP PDB:1WF2 PDBsum:1TXP
PDBsum:1WF2 ProteinModelPortal:P07910 SMR:P07910 DIP:DIP-29854N
IntAct:P07910 MINT:MINT-4999718 STRING:P07910 PhosphoSite:P07910
DMDM:108935845 SWISS-2DPAGE:P07910 PaxDb:P07910 PRIDE:P07910
DNASU:3183 Ensembl:ENST00000320084 Ensembl:ENST00000420743
Ensembl:ENST00000430246 Ensembl:ENST00000449098
Ensembl:ENST00000553300 Ensembl:ENST00000554455
Ensembl:ENST00000554969 Ensembl:ENST00000555883
Ensembl:ENST00000556628 Ensembl:ENST00000556897
Ensembl:ENST00000557201 GeneID:3183 KEGG:hsa:3183 UCSC:uc001vzw.3
UCSC:uc001vzy.3 UCSC:uc001wac.3 UCSC:uc001wad.3 CTD:3183
GeneCards:GC14M021677 HGNC:HGNC:5035 HPA:CAB005223 MIM:164020
neXtProt:NX_P07910 PharmGKB:PA162391217 eggNOG:NOG311712
InParanoid:P07910 KO:K12884 OMA:FSSPVEM OrthoDB:EOG45490H
ChiTaRS:HNRNPC EvolutionaryTrace:P07910 GenomeRNAi:3183
NextBio:12634 ArrayExpress:P07910 Bgee:P07910 Genevestigator:P07910
GermOnline:ENSG00000092199 Uniprot:P07910
Length = 306
Score = 120 (47.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|I3LK71 [details] [associations]
symbol:HNRNPC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045120 "pronucleus" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0045120 InterPro:IPR017347
PIRSF:PIRSF037992 OMA:FSSPVEM GeneTree:ENSGT00390000006718
Ensembl:ENSSSCT00000023644 Uniprot:I3LK71
Length = 307
Score = 120 (47.3 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>MGI|MGI:107795 [details] [associations]
symbol:Hnrnpc "heterogeneous nuclear ribonucleoprotein C"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0045120 "pronucleus"
evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:107795 GO:GO:0008380
GO:GO:0000166 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0045120 HOVERGEN:HBG002302 InterPro:IPR017347
PIRSF:PIRSF037992 CTD:3183 eggNOG:NOG311712 KO:K12884 OMA:FSSPVEM
ChiTaRS:HNRNPC EMBL:AF095257 EMBL:AF095258 EMBL:AK011336
EMBL:AK012633 EMBL:AK019958 EMBL:AK088245 EMBL:AK088678
EMBL:AK089061 EMBL:AK166590 EMBL:AK168802 EMBL:BC004706
EMBL:BC095922 IPI:IPI00223443 IPI:IPI00223444 IPI:IPI00759870
IPI:IPI00759886 IPI:IPI00874321 RefSeq:NP_001164452.1
RefSeq:NP_001164453.1 RefSeq:NP_001164454.1 RefSeq:NP_001164455.1
RefSeq:NP_058580.1 UniGene:Mm.427321 UniGene:Mm.473169
ProteinModelPortal:Q9Z204 SMR:Q9Z204 DIP:DIP-59747N STRING:Q9Z204
PhosphoSite:Q9Z204 PaxDb:Q9Z204 PRIDE:Q9Z204
Ensembl:ENSMUST00000111610 Ensembl:ENSMUST00000164655 GeneID:15381
KEGG:mmu:15381 UCSC:uc007tob.2 UCSC:uc007toc.2 UCSC:uc007tod.2
UCSC:uc007toe.2 UCSC:uc007tof.2 GeneTree:ENSGT00390000006718
NextBio:288046 Bgee:Q9Z204 CleanEx:MM_HNRNPC Genevestigator:Q9Z204
GermOnline:ENSMUSG00000060373 Uniprot:Q9Z204
Length = 313
Score = 120 (47.3 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>RGD|6491888 [details] [associations]
symbol:LOC100911576 "heterogeneous nuclear ribonucleoproteins
C1/C2-like" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:6491888 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 EMBL:CH474040
InterPro:IPR017347 PIRSF:PIRSF037992 KO:K12884
GeneTree:ENSGT00390000006718 UniGene:Rn.101929
RefSeq:XP_003751443.1 SMR:G3V9R8 Ensembl:ENSRNOT00000060514
GeneID:100911576 KEGG:rno:100911576 Uniprot:G3V9R8
Length = 313
Score = 120 (47.3 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|D4ACR0 [details] [associations]
symbol:Hnrnpc "Heterogeneous nuclear ribonucleoprotein C"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0045120 InterPro:IPR017347 PIRSF:PIRSF037992 IPI:IPI00781839
Ensembl:ENSRNOT00000060515 Uniprot:D4ACR0
Length = 333
Score = 120 (47.3 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|E2RLQ4 [details] [associations]
symbol:HNRNPC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR017347
PIRSF:PIRSF037992 OMA:FSSPVEM GeneTree:ENSGT00390000006718
EMBL:AAEX03009852 Ensembl:ENSCAFT00000008873 Uniprot:E2RLQ4
Length = 334
Score = 120 (47.3 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 110 (43.8 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|J9NYT3 [details] [associations]
symbol:HNRNPCL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
CTD:343069 InterPro:IPR017347 PIRSF:PIRSF037992
GeneTree:ENSGT00390000006718 EMBL:AAEX03008452
RefSeq:XP_003431805.1 ProteinModelPortal:J9NYT3
Ensembl:ENSCAFT00000004117 GeneID:474964 KEGG:cfa:474964
OMA:XKNDKSE Uniprot:J9NYT3
Length = 293
Score = 115 (45.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKG+AF+Q+ N +AR+A GEDGR + G+ L
Sbjct: 41 GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGRLL 80
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ N +AR+A GEDGR + G+ L I++
Sbjct: 48 VHKGFAFVQYVNERNARAAVAGEDGRMIAGRLLDINL 84
>UNIPROTKB|E5RG71 [details] [associations]
symbol:RALYL "RNA-binding Raly-like protein" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:27036
ChiTaRS:RALYL EMBL:AC009901 EMBL:AC012400 EMBL:AC027043
EMBL:AC087368 EMBL:AC092699 EMBL:AC092709 EMBL:AC103816
IPI:IPI00981789 SMR:E5RG71 Ensembl:ENST00000517988
Ensembl:ENST00000522613 Uniprot:E5RG71
Length = 85
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPL 85
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARVIAGQPL 85
>UNIPROTKB|E2QWT4 [details] [associations]
symbol:E2QWT4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000006718 EMBL:AAEX03015913
Ensembl:ENSCAFT00000039292 OMA:RIAGISM Uniprot:E2QWT4
Length = 98
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPL 85
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLG 34
+HKGYAF+Q+ + AR+A GE+ R + GQ LG
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARIIAGQPLG 86
>UNIPROTKB|I3LRX6 [details] [associations]
symbol:LOC100523119 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000006718 OMA:RIAGISM EMBL:CU179669
EMBL:CU462924 Ensembl:ENSSSCT00000025498 Uniprot:I3LRX6
Length = 98
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPL 85
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARIIAGQPL 85
>UNIPROTKB|J9NU79 [details] [associations]
symbol:HNRNPC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR017347
PIRSF:PIRSF037992 GeneTree:ENSGT00390000006718 EMBL:AAEX03005470
RefSeq:XP_856741.2 Ensembl:ENSCAFT00000029199 GeneID:480188
KEGG:cfa:480188 OMA:RVFINLN Uniprot:J9NU79
Length = 294
Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+ KG+AF+Q+ N +AR+A GEDGR + GQ L
Sbjct: 41 GKIVGCSVPKGFAFVQYVNERNARAAVAGEDGRMIAGQVL 80
Score = 101 (40.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
KG+AF+Q+ N +AR+A GEDGR + GQ L I++
Sbjct: 50 KGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84
>UNIPROTKB|B3KT61 [details] [associations]
symbol:RALYL "cDNA FLJ37707 fis, clone BRHIP2017642,
moderately similar to RNA-binding protein Raly" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000231958
HOVERGEN:HBG002302 InterPro:IPR017347 PIRSF:PIRSF037992 CTD:138046
RefSeq:NP_776247.3 UniGene:Hs.121663 DNASU:138046 GeneID:138046
KEGG:hsa:138046 HGNC:HGNC:27036 PharmGKB:PA162400636 ChiTaRS:RALYL
GenomeRNAi:138046 NextBio:83725 EMBL:AC009901 EMBL:AC012400
EMBL:AC027043 EMBL:AC087368 EMBL:AC092699 EMBL:AC092709
EMBL:AC103816 EMBL:AK095026 IPI:IPI01013944 SMR:B3KT61
STRING:B3KT61 Ensembl:ENST00000518566 UCSC:uc010lzy.3
Uniprot:B3KT61
Length = 280
Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPL 85
Score = 100 (40.3 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+ + AR+A GE+ R + GQ L I+M
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINM 89
>UNIPROTKB|Q86SE5 [details] [associations]
symbol:RALYL "RNA-binding Raly-like protein" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG250746
HOGENOM:HOG000231958 HOVERGEN:HBG002302 InterPro:IPR017347
PIRSF:PIRSF037992 CTD:138046 OrthoDB:EOG40CHJ0 EMBL:AF495529
EMBL:AF495530 EMBL:AK095560 EMBL:AK123437 EMBL:BC031090
IPI:IPI00166137 IPI:IPI00980380 RefSeq:NP_001093861.1
RefSeq:NP_001093862.1 RefSeq:NP_001093863.1 RefSeq:NP_776247.3
UniGene:Hs.121663 HSSP:Q9UKM9 ProteinModelPortal:Q86SE5 SMR:Q86SE5
IntAct:Q86SE5 MINT:MINT-1439633 STRING:Q86SE5 DMDM:158564044
PRIDE:Q86SE5 DNASU:138046 Ensembl:ENST00000521268
Ensembl:ENST00000521695 Ensembl:ENST00000522455
Ensembl:ENST00000523850 GeneID:138046 KEGG:hsa:138046
UCSC:uc003ycq.4 UCSC:uc003ycu.4 GeneCards:GC08P085095
HGNC:HGNC:27036 MIM:614648 neXtProt:NX_Q86SE5 PharmGKB:PA162400636
InParanoid:Q86SE5 ChiTaRS:RALYL GenomeRNAi:138046 NextBio:83725
ArrayExpress:Q86SE5 Bgee:Q86SE5 CleanEx:HS_RALYL
Genevestigator:Q86SE5 Uniprot:Q86SE5
Length = 291
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPL 85
Score = 100 (40.3 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+ + AR+A GE+ R + GQ L I+M
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINM 89
>MGI|MGI:1924147 [details] [associations]
symbol:Ralyl "RALY RNA binding protein-like" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1924147 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:NOG250746 HOGENOM:HOG000231958
HOVERGEN:HBG002302 InterPro:IPR017347 PIRSF:PIRSF037992
GeneTree:ENSGT00390000006718 CTD:138046 OrthoDB:EOG40CHJ0
HSSP:Q9UKM9 EMBL:AK032086 EMBL:AK038465 EMBL:AK079659 EMBL:BC052358
IPI:IPI00310432 IPI:IPI00473187 RefSeq:NP_001156800.1
RefSeq:NP_001156801.1 RefSeq:NP_001156802.1 RefSeq:NP_848746.1
UniGene:Mm.422625 ProteinModelPortal:Q8BTF8 SMR:Q8BTF8
PhosphoSite:Q8BTF8 PaxDb:Q8BTF8 PRIDE:Q8BTF8
Ensembl:ENSMUST00000108372 GeneID:76897 KEGG:mmu:76897
UCSC:uc008oqb.2 UCSC:uc008oqf.2 InParanoid:Q8BTF8 OMA:CISENAD
NextBio:346035 Bgee:Q8BTF8 CleanEx:MM_RALYL Genevestigator:Q8BTF8
Uniprot:Q8BTF8
Length = 293
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPL 85
Score = 100 (40.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+ + AR+A GE+ R + GQ L I+M
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINM 89
>UNIPROTKB|G3V129 [details] [associations]
symbol:RALYL "Putative uncharacterized protein LOC138046"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CH471068 InterPro:IPR017347 PIRSF:PIRSF037992 CTD:138046
RefSeq:NP_001093861.1 UniGene:Hs.121663 GeneID:138046
KEGG:hsa:138046 HGNC:HGNC:27036 ChiTaRS:RALYL GenomeRNAi:138046
NextBio:83725 OMA:CISENAD EMBL:AC009901 EMBL:AC012400 EMBL:AC027043
EMBL:AC087368 EMBL:AC092699 EMBL:AC092709 EMBL:AC103816
ProteinModelPortal:G3V129 SMR:G3V129 PRIDE:G3V129
Ensembl:ENST00000517638 ArrayExpress:G3V129 Bgee:G3V129
Uniprot:G3V129
Length = 304
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 59 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARVIAGQPL 98
Score = 100 (40.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+ + AR+A GE+ R + GQ L I+M
Sbjct: 66 VHKGYAFVQYMSERHARAAVAGENARVIAGQPLDINM 102
>UNIPROTKB|E1BUB9 [details] [associations]
symbol:E1BUB9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR017347
PIRSF:PIRSF037992 GeneTree:ENSGT00390000006718 OMA:CISENAD
EMBL:AADN02024786 EMBL:AADN02024787 EMBL:AADN02024788
EMBL:AADN02024789 EMBL:AADN02024790 IPI:IPI00680968
ProteinModelPortal:E1BUB9 Ensembl:ENSGALT00000030856 Uniprot:E1BUB9
Length = 290
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPL 85
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+ + AR+A GE+ R + GQ L I+M
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINM 89
>UNIPROTKB|Q08DJ0 [details] [associations]
symbol:RALYL "RNA-binding Raly-like protein" species:9913
"Bos taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG250746
HOGENOM:HOG000231958 HOVERGEN:HBG002302 InterPro:IPR017347
PIRSF:PIRSF037992 EMBL:BC123721 IPI:IPI00701678
RefSeq:NP_001071400.1 UniGene:Bt.51837 ProteinModelPortal:Q08DJ0
SMR:Q08DJ0 PRIDE:Q08DJ0 GeneID:516989 KEGG:bta:516989 CTD:138046
InParanoid:Q08DJ0 OrthoDB:EOG40CHJ0 NextBio:20872347 Uniprot:Q08DJ0
Length = 293
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ +G S+HKGYAF+Q+ + AR+A GE+ R + GQ L
Sbjct: 46 GKIVGCSVHKGYAFVQYMSERHARAAVAGENARIIAGQPL 85
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKGYAF+Q+ + AR+A GE+ R + GQ L I+M
Sbjct: 53 VHKGYAFVQYMSERHARAAVAGENARIIAGQPLDINM 89
>UNIPROTKB|O60812 [details] [associations]
symbol:HNRNPCL1 "Heterogeneous nuclear ribonucleoprotein
C-like 1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 EMBL:CH471130 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 EMBL:AL022101 EMBL:BC137258 EMBL:BC171866
IPI:IPI00027569 RefSeq:NP_001013653.1 UniGene:Hs.502617
ProteinModelPortal:O60812 SMR:O60812 IntAct:O60812
MINT:MINT-6733038 STRING:O60812 PhosphoSite:O60812 PaxDb:O60812
PRIDE:O60812 Ensembl:ENST00000317869 GeneID:343069 KEGG:hsa:343069
UCSC:uc010obf.2 CTD:343069 GeneCards:GC01M012907 H-InvDB:HIX0028700
H-InvDB:HIX0159705 HGNC:HGNC:29295 neXtProt:NX_O60812
PharmGKB:PA162391240 eggNOG:NOG250746 HOGENOM:HOG000231958
HOVERGEN:HBG002302 InParanoid:O60812 OMA:RANGQDD OrthoDB:EOG4SF974
GenomeRNAi:343069 NextBio:98454 CleanEx:HS_HNRNPCL1
Genevestigator:O60812 GermOnline:ENSG00000179172 InterPro:IPR017347
PIRSF:PIRSF037992 Uniprot:O60812
Length = 293
Score = 104 (41.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL 69
G+ G S+HKG+AF+Q+ +AR+A GEDGR + Q +
Sbjct: 41 GKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVV 80
Score = 96 (38.9 bits), Expect = 0.00024, P = 0.00024
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLGISM 37
+HKG+AF+Q+ +AR+A GEDGR + Q + I++
Sbjct: 48 VHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINL 84
>SGD|S000003482 [details] [associations]
symbol:YGR250C "Putative RNA binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SGD:S000003482 EMBL:BK006941 GO:GO:0000166 KO:K00033
RefSeq:NP_011772.3 GeneID:853172 KEGG:sce:YGR256W
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0010494 RefSeq:NP_011766.3
GeneID:853165 KEGG:sce:YGR250C EMBL:Z73035 PIR:S64576
ProteinModelPortal:P53316 SMR:P53316 DIP:DIP-5559N IntAct:P53316
MINT:MINT-388955 STRING:P53316 PaxDb:P53316 PeptideAtlas:P53316
EnsemblFungi:YGR250C CYGD:YGR250c eggNOG:NOG306754
HOGENOM:HOG000142071 OMA:NYHVERK OrthoDB:EOG4JWZP9 NextBio:973276
Genevestigator:P53316 GermOnline:YGR250C Uniprot:P53316
Length = 781
Score = 68 (29.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 33 LGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSYKLQYYNG 79
L + +GY F+ F +P DA A L DG V ++S G
Sbjct: 594 LPVGSSRGYGFVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRG 640
Score = 64 (27.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 4 GYAFIQFSNPHDARSACLGE-DGRTVLGQTLGISMH 38
GY FI + A S C+ E +GRTV G TL I+ H
Sbjct: 237 GYGFISYPLGSQA-SLCIKELNGRTVNGSTLFINYH 271
>UNIPROTKB|Q49AS9 [details] [associations]
symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 KO:K13201 EMBL:AC012468
HOVERGEN:HBG105006 RefSeq:NP_001029097.1 RefSeq:NP_003243.1
UniGene:Hs.501203 GeneID:7073 KEGG:hsa:7073 CTD:7073
HGNC:HGNC:11804 PharmGKB:PA36513 ChiTaRS:TIAL1 GenomeRNAi:7073
NextBio:27661 EMBL:BC030025 IPI:IPI01013673 SMR:Q49AS9
STRING:Q49AS9 Ensembl:ENST00000369092 UCSC:uc001lek.1
Uniprot:Q49AS9
Length = 252
Score = 66 (28.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 106 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 150
Score = 53 (23.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 15 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 45
>ZFIN|ZDB-GENE-040426-1547 [details] [associations]
symbol:tial1 "TIA1 cytotoxic granule-associated
RNA binding protein-like 1" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-1547 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00680000099967 EMBL:BX530079
IPI:IPI00920337 ProteinModelPortal:E9QJJ0
Ensembl:ENSDART00000135321 ArrayExpress:E9QJJ0 Bgee:E9QJJ0
Uniprot:E9QJJ0
Length = 389
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+FI+FS+ A A + +G T+ G + Y
Sbjct: 247 GQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCY 291
Score = 53 (23.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 156 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 186
>UNIPROTKB|D4A964 [details] [associations]
symbol:Tial1 "Protein Tial1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1595845 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00949247 Ensembl:ENSRNOT00000066938 Uniprot:D4A964
Length = 368
Score = 66 (28.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 246 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 155 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
>UNIPROTKB|F1LQ36 [details] [associations]
symbol:Tial1 "Protein Tial1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1595845 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
GO:GO:0017145 GeneTree:ENSGT00680000099967 IPI:IPI00555194
Ensembl:ENSRNOT00000027463 Uniprot:F1LQ36
Length = 371
Score = 66 (28.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 246 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 155 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
>UNIPROTKB|Q01085 [details] [associations]
symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=ISS] [GO:0003723 "RNA binding" evidence=TAS] [GO:0006952
"defense response" evidence=TAS] [GO:0005764 "lysosome"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006917 "induction of
apoptosis" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0006915 GO:GO:0006952 GO:GO:0006917 GO:GO:0000166
GO:GO:0008284 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0005764
GO:GO:0003723 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:M96954 EMBL:AK290695
EMBL:AK290984 IPI:IPI00005615 IPI:IPI00644708 PIR:A46174
RefSeq:NP_001029097.1 RefSeq:NP_003243.1 UniGene:Hs.501203 PDB:1X4G
PDB:2CQI PDB:2DH7 PDBsum:1X4G PDBsum:2CQI PDBsum:2DH7
ProteinModelPortal:Q01085 SMR:Q01085 DIP:DIP-42425N IntAct:Q01085
MINT:MINT-1203913 STRING:Q01085 PhosphoSite:Q01085 DMDM:267131
PaxDb:Q01085 PRIDE:Q01085 Ensembl:ENST00000369093
Ensembl:ENST00000436547 GeneID:7073 KEGG:hsa:7073 UCSC:uc001lei.1
CTD:7073 GeneCards:GC10M121324 HGNC:HGNC:11804 MIM:603413
neXtProt:NX_Q01085 PharmGKB:PA36513 OMA:EEVYNQS PhylomeDB:Q01085
ChiTaRS:TIAL1 EvolutionaryTrace:Q01085 GenomeRNAi:7073
NextBio:27661 ArrayExpress:Q01085 Bgee:Q01085 CleanEx:HS_TIAL1
Genevestigator:Q01085 GermOnline:ENSG00000151923 Uniprot:Q01085
Length = 375
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 229 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 273
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 138 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 168
>UNIPROTKB|F2Z4H8 [details] [associations]
symbol:TIAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017145 "stem cell division" evidence=IEA] [GO:0017091
"AU-rich element binding" evidence=IEA] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:NGSKQLR
EMBL:DAAA02059399 IPI:IPI00707976 RefSeq:NP_001179985.1
UniGene:Bt.15754 ProteinModelPortal:F2Z4H8
Ensembl:ENSBTAT00000005331 GeneID:614540 KEGG:bta:614540
NextBio:20899153 Uniprot:F2Z4H8
Length = 380
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 229 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 273
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 138 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 168
>UNIPROTKB|F1NY49 [details] [associations]
symbol:374274 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
IPI:IPI00575679 Ensembl:ENSGALT00000015349 ArrayExpress:F1NY49
Uniprot:F1NY49
Length = 388
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 245 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 289
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 154 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 184
>UNIPROTKB|F1NS94 [details] [associations]
symbol:374274 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
IPI:IPI00681845 Ensembl:ENSGALT00000029737 ArrayExpress:F1NS94
Uniprot:F1NS94
Length = 389
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 246 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 155 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
>UNIPROTKB|E2RA41 [details] [associations]
symbol:TIAL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017145 "stem cell division" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0007281 "germ
cell development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
EMBL:AAEX03015584 EMBL:AAEX03015585 RefSeq:XP_852319.1
ProteinModelPortal:E2RA41 SMR:E2RA41 Ensembl:ENSCAFT00000019370
GeneID:477841 KEGG:cfa:477841 NextBio:20853261 Uniprot:E2RA41
Length = 392
Score = 66 (28.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 246 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 155 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
>UNIPROTKB|F2Z5F9 [details] [associations]
symbol:LOC100736782 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
EMBL:CT826370 EMBL:CT867965 RefSeq:XP_003133244.1 UniGene:Ssc.56271
ProteinModelPortal:F2Z5F9 SMR:F2Z5F9 Ensembl:ENSSSCT00000011686
GeneID:100158186 KEGG:ssc:100158186 Uniprot:F2Z5F9
Length = 392
Score = 66 (28.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 246 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 155 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
>MGI|MGI:107913 [details] [associations]
symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
protein-like 1" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0017145 "stem cell
division" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:107913
GO:GO:0005634 GO:GO:0006915 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 ChiTaRS:TIAL1
EMBL:U55861 IPI:IPI00108085 PIR:S72436 RefSeq:NP_033409.1
UniGene:Mm.242072 ProteinModelPortal:P70318 SMR:P70318
IntAct:P70318 STRING:P70318 PhosphoSite:P70318 PaxDb:P70318
PRIDE:P70318 Ensembl:ENSMUST00000106226 GeneID:21843 KEGG:mmu:21843
InParanoid:P70318 OMA:NGSKQLR NextBio:301310 Bgee:P70318
Genevestigator:P70318 GermOnline:ENSMUSG00000030846 Uniprot:P70318
Length = 392
Score = 66 (28.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 246 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 155 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
>RGD|1595845 [details] [associations]
symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
protein-like 1" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0007281 "germ cell development" evidence=ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0017091
"AU-rich element binding" evidence=ISO] [GO:0017145 "stem cell
division" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1595845
GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 EMBL:CH473956
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 IPI:IPI00555194
EMBL:BC091409 RefSeq:NP_001013211.1 UniGene:Rn.162475 SMR:Q5BJN3
STRING:Q5BJN3 GeneID:361655 KEGG:rno:361655 UCSC:RGD:1595845
InParanoid:Q5BJN3 NextBio:677112 Genevestigator:Q5BJN3
Uniprot:Q5BJN3
Length = 392
Score = 66 (28.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 30 GQTLGISM--HKGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS A A + +G T+ G + Y
Sbjct: 246 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A + G+ + G+ +
Sbjct: 155 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 185
>RGD|1305742 [details] [associations]
symbol:Tia1 "TIA1 cytotoxic granule-associated RNA binding
protein" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA;ISO] [GO:0017091 "AU-rich element
binding" evidence=IEA;ISO] [GO:0017148 "negative regulation of
translation" evidence=IEA;ISO] [GO:0042036 "negative regulation of
cytokine biosynthetic process" evidence=IEA;ISO] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CH473957 eggNOG:COG0724
GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
CTD:7072 HOVERGEN:HBG105006 EMBL:BC087064 IPI:IPI00563419
RefSeq:NP_001012096.1 UniGene:Rn.198158 SMR:Q5PQR7 STRING:Q5PQR7
Ensembl:ENSRNOT00000023103 GeneID:312510 KEGG:rno:312510
UCSC:RGD:1305742 NextBio:664964 Genevestigator:Q5PQR7
Uniprot:Q5PQR7
Length = 375
Score = 67 (28.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 30 GQTLGISMH--KGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+FI+FS+ A A + +G T+ G + Y
Sbjct: 227 GQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCY 271
Score = 51 (23.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A G+ + G+ +
Sbjct: 136 KGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 166
>UNIPROTKB|D4A6U8 [details] [associations]
symbol:Tia1 "Protein Tia1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305742 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036 GO:GO:0048024
OrthoDB:EOG4B5P59 IPI:IPI00778030 ProteinModelPortal:D4A6U8
Ensembl:ENSRNOT00000041366 Uniprot:D4A6U8
Length = 382
Score = 67 (28.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 30 GQTLGISMH--KGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+FI+FS+ A A + +G T+ G + Y
Sbjct: 234 GQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCY 278
Score = 51 (23.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A G+ + G+ +
Sbjct: 143 KGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 173
>MGI|MGI:107914 [details] [associations]
symbol:Tia1 "cytotoxic granule-associated RNA binding protein
1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0017091 "AU-rich element binding"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IMP] [GO:0048024 "regulation of mRNA
splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:107914 GO:GO:0005634 GO:GO:0006915 GO:GO:0017148
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
GO:GO:0048024 GO:GO:0010494 eggNOG:COG0724 HOGENOM:HOG000206748
KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:U00689
EMBL:U55862 IPI:IPI00132462 PIR:S72435 RefSeq:NP_035715.1
UniGene:Mm.333219 PDB:2DGO PDB:2RNE PDBsum:2DGO PDBsum:2RNE
ProteinModelPortal:P52912 SMR:P52912 STRING:P52912
PhosphoSite:P52912 PaxDb:P52912 PRIDE:P52912
Ensembl:ENSMUST00000095753 GeneID:21841 KEGG:mmu:21841
InParanoid:P52912 OMA:TSAPWMG EvolutionaryTrace:P52912
NextBio:301304 Bgee:P52912 Genevestigator:P52912
GermOnline:ENSMUSG00000071337 Uniprot:P52912
Length = 386
Score = 66 (28.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 30 GQTLGISMH--KGYAFIQFSNPHDARSACLGEDGRTVLGQTLVSY 72
GQ + I + KGY+F++FS+ A A + +G T+ G + Y
Sbjct: 238 GQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCY 282
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 3 KGYAFIQFSNPHDARSACLGEDGRTVLGQTL 33
KGY F+ F N DA +A G+ + G+ +
Sbjct: 147 KGYGFVSFFNKWDAENAIQQMGGQWLGGRQI 177
>POMBASE|SPBC23E6.01c [details] [associations]
symbol:SPBC23E6.01c "mRNA processing factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISO] [GO:0003729 "mRNA
binding" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
[GO:0071004 "U2-type prespliceosome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPBC23E6.01c GO:GO:0005829 GO:GO:0000166
EMBL:CU329671 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000932
eggNOG:COG0724 GO:GO:0071004 OrthoDB:EOG44BFB8 GO:GO:0070935
HOGENOM:HOG000186228 RefSeq:NP_596601.2 ProteinModelPortal:O60176
STRING:O60176 EnsemblFungi:SPBC23E6.01c.1 GeneID:2540551
KEGG:spo:SPBC23E6.01c OMA:HEASSAM NextBio:20801677 Uniprot:O60176
Length = 473
Score = 65 (27.9 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 1 MHKGYAFIQFSNPHDARSA 19
M+ GY F++F++PH+A SA
Sbjct: 132 MNAGYCFVEFASPHEASSA 150
Score = 50 (22.7 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 36 SMHKGYAFIQFSNPHDARSACLGEDGR 62
++ +GY F++F++ +D +SA G+
Sbjct: 225 NVSRGYGFVRFTDENDQKSALAEMQGQ 251
>TAIR|locus:2039975 [details] [associations]
symbol:RS31a "arginine/serine-rich splicing factor 31a"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC006418 UniGene:At.13832 UniGene:At.28553
HSSP:P52298 HOGENOM:HOG000276234 KO:K12893 EMBL:AY065237
EMBL:BT000995 EMBL:AK317202 IPI:IPI00520334 PIR:A84905
RefSeq:NP_182184.1 ProteinModelPortal:Q9ZPX8 SMR:Q9ZPX8
IntAct:Q9ZPX8 PaxDb:Q9ZPX8 PRIDE:Q9ZPX8 EnsemblPlants:AT2G46610.1
GeneID:819273 KEGG:ath:AT2G46610 TAIR:At2g46610 eggNOG:NOG254972
InParanoid:Q9ZPX8 OMA:TRERDME PhylomeDB:Q9ZPX8
ProtClustDB:CLSN2683469 ArrayExpress:Q9ZPX8 Genevestigator:Q9ZPX8
Uniprot:Q9ZPX8
Length = 250
Score = 63 (27.2 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 30 GQTLGISMHKGYAFIQFSNPHDARSACLGEDGRTVLGQTL-VSYKLQ 75
G+ L + M + +AF+QF+ DA A +L + + V Y L+
Sbjct: 120 GKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALR 166
Score = 53 (23.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 1 MHKGYAFIQFSNPHDARSACLGEDGRT 27
M GYAF+ F + DA A D T
Sbjct: 33 MKSGYAFVYFEDERDAEDAIRRTDNTT 59
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 89 89 0.00091 102 3 11 22 0.46 29
29 0.50 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 476 (51 KB)
Total size of DFA: 97 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.59u 0.08s 9.67t Elapsed: 00:00:03
Total cpu time: 9.59u 0.08s 9.67t Elapsed: 00:00:03
Start: Thu Aug 15 14:47:57 2013 End: Thu Aug 15 14:48:00 2013