Query psy4384
Match_columns 661
No_of_seqs 494 out of 2570
Neff 6.7
Searched_HMMs 13730
Date Sat Aug 17 00:10:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4384.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/4384hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fnja1 b.29.1.22 (A:35-251) L 100.0 1.1E-28 8.2E-33 245.5 15.2 162 264-468 24-204 (217)
2 d2afja1 b.29.1.22 (A:12-224) S 99.9 9.2E-29 6.7E-33 245.4 8.6 153 265-460 36-205 (213)
3 d1eova2 d.104.1.1 (A:205-557) 99.9 4.2E-25 3.1E-29 234.8 13.6 153 506-661 105-261 (353)
4 d1e1oa2 d.104.1.1 (A:161-502) 99.9 2.2E-22 1.6E-26 212.8 10.4 141 504-658 84-246 (342)
5 d1b8aa2 d.104.1.1 (A:104-438) 99.9 4.9E-22 3.6E-26 209.4 11.8 146 506-660 95-244 (335)
6 d1n9wa2 d.104.1.1 (A:111-414) 99.8 1.8E-21 1.3E-25 202.4 12.0 142 507-658 76-221 (304)
7 d1nnha_ d.104.1.1 (A:) Hypothe 99.8 1.6E-20 1.2E-24 194.0 5.6 117 505-658 81-199 (293)
8 d1l0wa3 d.104.1.1 (A:105-294,A 99.7 3.2E-18 2.3E-22 181.5 0.2 123 506-653 103-234 (356)
9 d1c0aa3 d.104.1.1 (A:107-287,A 99.7 7.1E-18 5.2E-22 178.1 1.8 130 505-659 94-229 (346)
10 d2fbea1 b.29.1.22 (A:1-188) Si 99.0 2E-09 1.4E-13 103.0 15.3 143 263-453 11-173 (188)
11 d2iwgb1 b.29.1.22 (B:4-182) 52 98.9 8.2E-09 6E-13 97.9 13.8 141 264-451 3-163 (179)
12 d1wepa_ g.50.1.2 (A:) PHD fing 97.6 4.8E-06 3.5E-10 67.8 0.8 43 3-48 20-62 (79)
13 d1weea_ g.50.1.2 (A:) PHD fing 97.4 1.2E-05 9E-10 64.0 0.3 42 3-48 24-65 (72)
14 d1we9a_ g.50.1.2 (A:) PHD fing 97.2 2E-05 1.5E-09 61.2 -0.8 42 4-48 16-57 (64)
15 d1wema_ g.50.1.2 (A:) Death as 96.9 2E-05 1.4E-09 63.3 -3.4 41 7-47 27-68 (76)
16 d1wewa_ g.50.1.2 (A:) Sumoylat 96.7 7.6E-05 5.6E-09 60.2 -1.4 39 9-47 29-70 (78)
17 d1mm2a_ g.50.1.2 (A:) Mi2-beta 95.7 0.001 7.3E-08 50.8 0.5 36 9-48 20-55 (61)
18 d1weva_ g.50.1.2 (A:) PHD fing 95.6 0.00034 2.5E-08 57.5 -2.8 40 8-47 31-70 (88)
19 d1jjca_ d.104.1.1 (A:) Phenyl- 95.5 0.0051 3.8E-07 60.3 5.1 50 513-563 111-161 (266)
20 d2pnxa1 g.50.1.2 (A:195-245) I 95.2 0.0017 1.3E-07 47.6 0.2 34 8-47 13-49 (51)
21 d1f62a_ g.50.1.2 (A:) Williams 95.1 0.0036 2.6E-07 45.7 1.9 37 8-48 13-49 (51)
22 d1wesa_ g.50.1.2 (A:) PHD Inhi 93.8 0.0085 6.2E-07 46.9 1.2 35 8-48 29-64 (71)
23 d1fp0a1 g.50.1.2 (A:19-88) Nuc 93.7 0.0082 6E-07 46.8 1.0 36 9-48 18-53 (70)
24 d2c6ya1 a.4.5.14 (A:1-98) Inte 83.4 0.72 5.2E-05 37.7 5.3 69 58-142 5-80 (98)
25 d2a07f1 a.4.5.14 (F:503-584) F 82.2 0.57 4.2E-05 37.1 4.0 68 58-141 4-73 (82)
26 d1b76a2 d.104.1.1 (A:1-394) Gl 80.3 0.59 4.3E-05 46.5 4.4 51 513-566 148-201 (331)
27 d1d5va_ a.4.5.14 (A:) Adipocyt 80.0 0.92 6.7E-05 36.7 4.7 72 56-143 4-82 (94)
28 d1z7ma1 d.104.1.1 (A:6-323) AT 79.9 0.88 6.4E-05 44.4 5.5 37 510-547 95-131 (318)
29 d3bpya1 a.4.5.14 (A:93-177) Af 78.7 2.2 0.00016 33.7 6.5 63 57-131 6-69 (85)
30 d1qf6a4 d.104.1.1 (A:242-532) 76.8 0.68 5E-05 45.2 3.5 53 513-568 113-168 (291)
31 d1nyra4 d.104.1.1 (A:242-532) 75.7 0.79 5.8E-05 44.7 3.6 48 513-562 115-165 (291)
32 d1qe0a2 d.104.1.1 (A:1-325) Hi 72.4 1.4 0.0001 43.0 4.6 36 512-548 102-137 (325)
33 d2hdca_ a.4.5.14 (A:) Genesis 71.0 1.4 0.00011 35.7 3.5 69 58-142 4-79 (97)
34 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 63.0 3.4 0.00025 31.8 4.0 55 62-132 2-56 (75)
35 d1wu7a2 d.104.1.1 (A:3-329) Hi 58.8 3.8 0.00028 39.8 4.7 37 511-548 97-133 (327)
36 d1atia2 d.104.1.1 (A:1-394) Gl 57.1 3.5 0.00026 41.6 4.1 32 513-546 211-245 (394)
37 d1g5ha2 d.104.1.1 (A:41-330) T 57.0 3.3 0.00024 40.0 3.8 50 513-564 141-195 (290)
38 d1nj8a3 d.104.1.1 (A:0-267) Pr 56.2 5.9 0.00043 37.5 5.5 48 513-561 124-174 (268)
39 d1hc7a2 d.104.1.1 (A:5-276) Pr 53.7 7.6 0.00055 36.2 5.8 50 513-563 129-179 (272)
40 d1nj1a3 d.104.1.1 (A:19-283) P 53.4 6.6 0.00048 36.9 5.3 47 513-560 121-170 (265)
41 d1kmma2 d.104.1.1 (A:4-325) Hi 47.7 8 0.00058 37.1 5.0 37 512-549 100-136 (322)
42 d1seta2 d.104.1.1 (A:111-421) 45.6 12 0.00088 36.2 5.8 50 513-562 137-192 (311)
43 d1h4vb2 d.104.1.1 (B:2-325) Hi 45.4 8.2 0.0006 37.2 4.6 36 512-548 101-136 (324)
44 d1wila_ g.50.1.3 (A:) Hypothet 43.9 2 0.00014 33.6 -0.4 18 9-26 28-45 (89)
45 d1usya_ d.104.1.1 (A:) ATP pho 43.3 5.7 0.00041 37.7 2.9 33 512-548 71-103 (275)
46 d2dlqa3 g.37.1.1 (A:63-92) GLI 38.0 4.4 0.00032 24.7 0.6 14 40-57 4-17 (30)
47 d1vyxa_ g.44.1.3 (A:) IE1B pro 22.2 9.3 0.00068 27.3 0.2 19 9-27 22-40 (60)
No 1
>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.95 E-value=1.1e-28 Score=245.50 Aligned_cols=162 Identities=16% Similarity=0.278 Sum_probs=141.0
Q ss_pred eEeCcCCCCCCeEEeCCCcEEEe----CCCeeEEEEeEEEeCCeEEEEEEEEeeCCCCcEEEEEeCCCCCCC-----CCC
Q psy4384 264 VLLALHDRAPQLRISEDRLAVTG----DKGYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANLQ-----TPL 334 (661)
Q Consensus 264 v~~s~~dr~~~l~ls~d~l~v~~----~~g~~~vRa~~~v~~G~~YfEv~i~~~~~~~~vriG~a~~~~~l~-----~pv 334 (661)
.+||+.|++..+.|++|++.+.. ..++.+||++.++++|+|||||+|.....+++++|||++..++++ ..+
T Consensus 24 ~~wn~~~~~~~~~ls~~~~~~~~~~~~~~~~~~vrgt~g~ssGk~YWEV~v~~~~~~~~~~IGV~~~~~~~~~~~~~~~~ 103 (217)
T d2fnja1 24 HSWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQSLV 103 (217)
T ss_dssp TSEEEEEECTTEEEETTEEEEEEECCCTTEEEEEEESCCBCSSEEEEEEECCGGGCTTCCEEEEECTTSCSEEESSCCCT
T ss_pred ccCChhcCCCCEEEeCCCceEEEeCCccccCCeEEEcccccCCcEEEEEEEecCCCCCeeEEEEEecccCcccCCccccc
Confidence 45999999999999999876642 458889999999999999999999876667789999999999884 469
Q ss_pred CCcCccEEEEcCCCcEEeCCCC---------cccCCCCCCCCEEEEEeeCCCCCCCCCCCCccCCccccccccccchhcc
Q psy4384 335 GYDKFGYSWRSRKGTRFHECRG---------KHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEK 405 (661)
Q Consensus 335 G~d~~syg~~~~~G~~~h~s~~---------~~yg~~~~~GDVIG~~i~l~~~~~~~~~~~~~~d~~~i~~k~~~~~e~~ 405 (661)
|+|..||+|+..+|.++|++.. ..||+.|..||||||+||++.
T Consensus 104 G~~~~s~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~gDvIGV~LD~d~---------------------------- 155 (217)
T d2fnja1 104 GSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDE---------------------------- 155 (217)
T ss_dssp TSSTTEEEEETTTTEEEESTTTSCCEESSTTCCTTCCCCCCSEEEEEEETTT----------------------------
T ss_pred cCCCCcceEecCCCEEEecCCCccccccCcccccCCccCCCCEEEEEEeCCC----------------------------
Confidence 9999999999999999997643 247789999999999999999
Q ss_pred chhhHHHhhcccCCCcEEEEEECCeeccccceeccCCceEEEEEe-cCCcEEEEeCCCCCCCCC
Q psy4384 406 DKVTEALKRLQTLDQSQIVFYKNGKSQGVAFQDIYAGYYYPCVSL-HKNCTVSVNFGPHFKHAL 468 (661)
Q Consensus 406 d~~~~~~~~~~~~~~s~I~f~kNG~~~G~AF~~i~~g~yyPavSl-~~g~~v~~NFG~~F~~~p 468 (661)
++|.|||||+.||+||++|..+.||||||. +.+++|+++|...++..|
T Consensus 156 ---------------gtLsF~kNG~~lGvAf~~l~~~~lyP~vs~~~~~~~v~~~~~~~~~~~~ 204 (217)
T d2fnja1 156 ---------------GTLSFIVDQQYLGIAFRGLRGKKLYPIVSAVWGHCEITMRYIGGLDPEP 204 (217)
T ss_dssp ---------------TEEEEEETTEEEEEEECCCTTCCBEEEEEECCTTCEEEEEEEEEECSSC
T ss_pred ---------------CEEEEEECCEEeeEEEeCCCCCeEEEEEEeccCCcEEEEEEcCCcCCCC
Confidence 899999999999999999988899999995 568999999865554433
No 2
>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=9.2e-29 Score=245.36 Aligned_cols=153 Identities=20% Similarity=0.326 Sum_probs=136.3
Q ss_pred EeCcCCCCCCeEEeCCCcEEEe---CCCeeEEEEeEEEeCCeEEEEEEEEeeCCCCcEEEEEeCCCCCCCCC-----CCC
Q psy4384 265 LLALHDRAPQLRISEDRLAVTG---DKGYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANLQTP-----LGY 336 (661)
Q Consensus 265 ~~s~~dr~~~l~ls~d~l~v~~---~~g~~~vRa~~~v~~G~~YfEv~i~~~~~~~~vriG~a~~~~~l~~p-----vG~ 336 (661)
.||+.|++..+.|++++|+++. .++|.+||++.++.+|+|||||+|.+...+++++|||++..++++.. +|+
T Consensus 36 ~wnp~~~~~~i~ls~g~l~~~~~~~~~~~~~v~gt~~~ssGk~YwEv~i~~~~~~~~~~iGv~~~~~~~~~~~~~~~~G~ 115 (213)
T d2afja1 36 GWNPKDCSENIDVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGS 115 (213)
T ss_dssp SSCCSSSCCSSEEETTTTEEECSSCTTTSSSEEECCCCCCSEEEEEEECCCCSSSCCCEEEEEESSCCCSSCSSSCCCCC
T ss_pred cCChhhcCCCeEEeCCCeEEEeCCccCccccEEECccccCCcEEEEEEEeccCCcceEEEeEeecccCccccCccccccc
Confidence 3899999999999999999975 47899999999999999999999987666789999999998887653 899
Q ss_pred cCccEEEEcCCCcEEeCCC--------CcccCCCCCCCCEEEEEeeCCCCCCCCCCCCccCCccccccccccchhccchh
Q psy4384 337 DKFGYSWRSRKGTRFHECR--------GKHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEKDKV 408 (661)
Q Consensus 337 d~~syg~~~~~G~~~h~s~--------~~~yg~~~~~GDVIG~~i~l~~~~~~~~~~~~~~d~~~i~~k~~~~~e~~d~~ 408 (661)
+..||||...+|.++|.+. ...||+.|..||||||+||++.
T Consensus 116 ~~~s~g~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~gDvIGvaLD~d~------------------------------- 164 (213)
T d2afja1 116 NSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEE------------------------------- 164 (213)
T ss_dssp SCEEEEEEGGGTSTTSSSSCCSCSSSSCCSGGGGSCCSSCEEEEEETTT-------------------------------
T ss_pred ccCCcccccccceEeecccccccCCcCcCccCcccCCCCEEEEEEeCCC-------------------------------
Confidence 9999999988888877553 3457788999999999999999
Q ss_pred hHHHhhcccCCCcEEEEEECCeeccccceeccCCceEEEEEe-cCCcEEEEeC
Q psy4384 409 TEALKRLQTLDQSQIVFYKNGKSQGVAFQDIYAGYYYPCVSL-HKNCTVSVNF 460 (661)
Q Consensus 409 ~~~~~~~~~~~~s~I~f~kNG~~~G~AF~~i~~g~yyPavSl-~~g~~v~~NF 460 (661)
++|.|||||+.||+||++|..+.||||||. +.++.|+++|
T Consensus 165 ------------g~i~F~kNG~~lG~af~~l~~~~lyP~vs~~~g~~~~~~~~ 205 (213)
T d2afja1 165 ------------GTLGYSIGGTYLGPAFRGLKGRTLYPSVSAVWGQCQVRIRY 205 (213)
T ss_dssp ------------TEEEEESTTCSCSTTHHHHHHHCCEEEEEECCTTSCCEEEE
T ss_pred ------------CEEEEEECCEEeeeeEECCCCCeEEEEEEEecCCcEEEEEE
Confidence 899999999999999999987899999995 6789999876
No 3
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.91 E-value=4.2e-25 Score=234.84 Aligned_cols=153 Identities=24% Similarity=0.474 Sum_probs=126.6
Q ss_pred eeecccceeEEEecccccCCCCCCCChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhcccc
Q psy4384 506 KLDLSLSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLESHEEELLTYRKLINLAN 585 (661)
Q Consensus 506 ~la~g~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~~~~~~l~~~~~~~~~~~ 585 (661)
.+++|+++|||||||||||++++.||||||||||||++|.++++++|+++|+|+++++..+.......++.+......
T Consensus 105 ll~~g~~~vf~I~~~FR~E~~~~~rH~pEFtmLE~y~a~~d~~~~i~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 182 (353)
T d1eova2 105 LIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVRKQYPV-- 182 (353)
T ss_dssp HHHTTCCEEEEEEEEECCCCCCCTTCCSEEEEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHSCC--
T ss_pred hhhcccccceeechhhhccccccccccchhcccccccccchhhHHHHHHHHHHHhhhccccchhhhhhhhhhcccCcc--
Confidence 478899999999999999999998999999999999999987899999999999999999988877666666544332
Q ss_pred ccccccccCCcccccCHHHHHHHHHHcCCCCCCCCCCchHHHHHHhhh----ccCceEEEEcCcccccccccccCCCCCC
Q psy4384 586 ITDLQCIHDNPFIRMSYSAAVTILTRHGFDVNPDSGLSKQHELFLVKY----TNNVPIFIINWPKHVKPFYMKRSGEDPD 661 (661)
Q Consensus 586 ~~~l~~~~~~pf~rit~~EAi~lL~~~~i~~~~g~dl~~~~E~~L~e~----~~~~PvFv~~yP~~~~PFY~k~~~~dp~ 661 (661)
.........+++++++.||+++|++.+.......++..+.++.|++. ....++||+|||++++|||++.++++++
T Consensus 183 -~~~~~~~~~~~~ri~~~ea~~~l~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~i~~~P~~~~p~~~~~~~~~~~ 261 (353)
T d1eova2 183 -EEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYTMPDPANPK 261 (353)
T ss_dssp -CCCCCCTTCCCEEEEHHHHHHHHHHTTCCCCTTCCCCHHHHHHHHHHHHHHSCCSEEEEECCBGGGSCTTBCBCSSCTT
T ss_pred -ceeeccCCCceeeeehHhhHHHHHHHhhhcccccccchhhHHHHHHHHHhhccCCcccccCCcHHHhhhhhCCChhhhh
Confidence 12222345689999999999999999887777778888887776543 3445678889999999999999888764
No 4
>d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=99.86 E-value=2.2e-22 Score=212.81 Aligned_cols=141 Identities=23% Similarity=0.333 Sum_probs=102.6
Q ss_pred eeeeecccceeEEEecccccCCCCCCCChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhcc
Q psy4384 504 KLKLDLSLSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLESHEEELLTYRKLINL 583 (661)
Q Consensus 504 qL~la~g~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~~~~~~l~~~~~~~~~ 583 (661)
|+.+++|+++||+||||||||+++ +||+|||||||||++|++ ++|+|+++|+|+++++..+.+.+....
T Consensus 84 k~~l~~g~~~vf~i~p~FR~E~~~-~rHl~EFtmlE~e~a~~~-~~d~m~~~e~l~~~i~~~~~~~~~~~~--------- 152 (342)
T d1e1oa2 84 KRLVVGGFERVFEINRNFRNEGIS-VRHNPEFTMMELYMAYAD-YHDLIELTESLFRTLAQEVLGTTKVTY--------- 152 (342)
T ss_dssp HHHHHHTCCEEEEEEEEECCCCCC-C-CCSEEEEEEEEEESCC-HHHHHHHHHHHHHHHHHHHHSSSEEEE---------
T ss_pred HHHhhhcccceeeecccccccccc-ccchHHHHHHHHHHHhhh-hhhHHHhhhHHHHHHHHHHhCcchhhc---------
Confidence 345788999999999999999875 589999999999999998 999999999999999998876542110
Q ss_pred ccccccccccCCcccccCHHHHHHH-------------------HHHcCCCCCCCCCCc---hHHHHHHhhhccCceEEE
Q psy4384 584 ANITDLQCIHDNPFIRMSYSAAVTI-------------------LTRHGFDVNPDSGLS---KQHELFLVKYTNNVPIFI 641 (661)
Q Consensus 584 ~~~~~l~~~~~~pf~rit~~EAi~l-------------------L~~~~i~~~~g~dl~---~~~E~~L~e~~~~~PvFv 641 (661)
.........||+++++.+|++. .++.+++.+..++++ .+.+..+++.....|+||
T Consensus 153 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~fi 229 (342)
T d1e1oa2 153 ---GEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFI 229 (342)
T ss_dssp ---TTEEEETTSCCEEEEHHHHHHHHSTTCCGGGGGSHHHHHHHHHHTTCCCCTTCCHHHHHHHHHHHHTGGGCCSCEEE
T ss_pred ---cchhcccCCchhhhhHHHHHHHHhccccHhhhhhhHHHHHHHHHcCCCcccccchhHHHHHHHHHhhHhhccCCCcC
Confidence 0001123456777777766643 334455555444433 344455555557789999
Q ss_pred EcCcccccccccccCCC
Q psy4384 642 INWPKHVKPFYMKRSGE 658 (661)
Q Consensus 642 ~~yP~~~~PFY~k~~~~ 658 (661)
+|||++++||||+.+++
T Consensus 230 ~~~P~~~~~f~~~~~~~ 246 (342)
T d1e1oa2 230 TEYPAEVSPLARRNDVN 246 (342)
T ss_dssp ECCBGGGCTTBCBCSSC
T ss_pred CCCccccChhhcccccc
Confidence 99999999998876543
No 5
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=99.85 E-value=4.9e-22 Score=209.43 Aligned_cols=146 Identities=27% Similarity=0.491 Sum_probs=121.3
Q ss_pred eeecccceeEEEecccccCCCCCCCChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhcccc
Q psy4384 506 KLDLSLSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLESHEEELLTYRKLINLAN 585 (661)
Q Consensus 506 ~la~g~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~~~~~~l~~~~~~~~~~~ 585 (661)
.|++|+++|||||||||||++++.||++||||+|+|+++.++++++|+++|+++..++..+......+++.+....
T Consensus 95 ll~~g~~~if~i~~~FR~e~~~~~rh~~Ef~~le~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---- 170 (335)
T d1b8aa2 95 MMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFEL---- 170 (335)
T ss_dssp GGGTTCCEEEEEEEEECCCSSCCSSCCSEEEEEEEEEESCSSHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTCCC----
T ss_pred HHhhhhhhHHHhhcccccccccccccchHHHhhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccchhhhhcccc----
Confidence 5789999999999999999999989999999999999987569999999999999999988877665555443211
Q ss_pred ccccccccCCcccccCHHHHHHHHHHcCCCCCCCCCCchHHHHH----HhhhccCceEEEEcCcccccccccccCCCCC
Q psy4384 586 ITDLQCIHDNPFIRMSYSAAVTILTRHGFDVNPDSGLSKQHELF----LVKYTNNVPIFIINWPKHVKPFYMKRSGEDP 660 (661)
Q Consensus 586 ~~~l~~~~~~pf~rit~~EAi~lL~~~~i~~~~g~dl~~~~E~~----L~e~~~~~PvFv~~yP~~~~PFY~k~~~~dp 660 (661)
...+.+|+|+++.||+++|++.+.++.+++++..+..+. +.+.....|+||+|||++++|||++.++++|
T Consensus 171 -----~~~~~~~~r~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fi~~~P~~~~pl~~~~~~~~~ 244 (335)
T d1b8aa2 171 -----EEPKLPFPRVSYDKALEILGDLGKEIPWGEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKP 244 (335)
T ss_dssp -----CCCCSSCCEEEHHHHHHHHHHTTCCCCTTSCCCHHHHHHHHHHHHHHHCCSEEEEESCBGGGSCTTBCEETTEE
T ss_pred -----ccCCCCcccccHHHHHHHHHhhccccCcccccccccccceeeeeecccccccceeecChHHhhhccccccCCCc
Confidence 124678999999999999999999998888888776544 3344456679999999999999998776654
No 6
>d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=99.84 E-value=1.8e-21 Score=202.44 Aligned_cols=142 Identities=22% Similarity=0.412 Sum_probs=104.5
Q ss_pred eecccceeEEEecccccCCCCCCCChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhccccc
Q psy4384 507 LDLSLSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLESHEEELLTYRKLINLANI 586 (661)
Q Consensus 507 la~g~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~~~~~~l~~~~~~~~~~~~ 586 (661)
+++|+++||+||||||||++.++||++||||||||++|.++++++|+++|++++.++..+...+...+..++....
T Consensus 76 l~~g~~~if~i~~~FR~ee~~~~rh~~EF~~le~~~~~~~~~~~~~~l~E~l~~~~~~~~~~~~~~~~~~~~~~~~---- 151 (304)
T d1n9wa2 76 MVGVFERVYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNTAGDEIRLLGATWP---- 151 (304)
T ss_dssp HHHHHSEEEEEEEC-------------CCEEEEEEEESCSSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTCCCC----
T ss_pred hhcccccceeehhhcccccccccccccHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccee----
Confidence 6789999999999999999988899999999999999977689999999999999999998877666655432211
Q ss_pred cccccccCCcccccCHHHHHHHHHHcCCCCCCCCCCchHHHHHHhhhc----cCceEEEEcCcccccccccccCCC
Q psy4384 587 TDLQCIHDNPFIRMSYSAAVTILTRHGFDVNPDSGLSKQHELFLVKYT----NNVPIFIINWPKHVKPFYMKRSGE 658 (661)
Q Consensus 587 ~~l~~~~~~pf~rit~~EAi~lL~~~~i~~~~g~dl~~~~E~~L~e~~----~~~PvFv~~yP~~~~PFY~k~~~~ 658 (661)
....+++++++.||+++++.. .....+.++..+.++.|.+.. ...|+||+|||++++|||+..+.+
T Consensus 152 -----~~~~~~~~~~~~e~~~~l~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~fi~~~P~~~~p~~~~~~~~ 221 (304)
T d1n9wa2 152 -----SFPQDIPRLTHAEAKRILKEE-LGYPVGQDLSEEAERLLGEYAKERWGSDWLFVTRYPRSVRPFYTYPEED 221 (304)
T ss_dssp -----CCSSSCCEEEHHHHHHHHHHT-SCCCCCSSCCHHHHHHHHHHHHHHTCCSEEEEECCBGGGSCTTBCBCTT
T ss_pred -----cccchhhhhhHHHHHHHHHHH-hCCCcCCCccHHHHHHHHHHHHhhcCCceEEEeCChhhhCchhhccccc
Confidence 245678999999999998764 445566778888888776643 467999999999999999876543
No 7
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.79 E-value=1.6e-20 Score=194.02 Aligned_cols=117 Identities=22% Similarity=0.383 Sum_probs=90.4
Q ss_pred eeeecccceeEEEecccccCCC--CCCCChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhc
Q psy4384 505 LKLDLSLSKVYTLNPTFRAENS--KSRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLESHEEELLTYRKLIN 582 (661)
Q Consensus 505 L~la~g~~rVyeIg~~FRaE~s--~t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~~~~~~l~~~~~~~~ 582 (661)
+.|++|++||||||||||||++ +|.||||||||||||++|++ ++|+|+++|+||+++++.+.... +..+
T Consensus 81 ~lla~g~~~Vf~I~~~FR~E~~~s~t~RH~~EFtmLE~e~~~~d-~~d~m~~~e~li~~~~~~~~~~~-------~~~~- 151 (293)
T d1nnha_ 81 LAIAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK-MEDIMRLIERLVYGLFRKAEEWT-------GREF- 151 (293)
T ss_dssp HHHHTTCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC-HHHHHHHHHHHHHHHHHHHHHHH-------SSCC-
T ss_pred HHHHhccccceeechhhhcCcccCCCCccchhhhhhcccccccc-HHHHHHHHHHHHHHHHHHHHHHh-------Cccc-
Confidence 4578999999999999999964 46799999999999999998 99999999999999988764321 1111
Q ss_pred cccccccccccCCcccccCHHHHHHHHHHcCCCCCCCCCCchHHHHHHhhhccCceEEEEcCcccccccccccCCC
Q psy4384 583 LANITDLQCIHDNPFIRMSYSAAVTILTRHGFDVNPDSGLSKQHELFLVKYTNNVPIFIINWPKHVKPFYMKRSGE 658 (661)
Q Consensus 583 ~~~~~~l~~~~~~pf~rit~~EAi~lL~~~~i~~~~g~dl~~~~E~~L~e~~~~~PvFv~~yP~~~~PFY~k~~~~ 658 (661)
....+|++++|.||++.+ |. |. ...+. ...|+|++|||. +||++.+++
T Consensus 152 ---------~~~~~~~~~~~~eal~~~---g~------d~------~~~~~-~~~p~~~~~~p~---~f~~~~~~~ 199 (293)
T d1nnha_ 152 ---------PKTKRFEVFEYSEVLEEF---GS------DE------KASQE-MEEPFWIINIPR---EFYDREVDG 199 (293)
T ss_dssp ---------CCCSSCEEEEHHHHHHHT---SS------HH------HHHHH-CSSCEEEECCCC---CTTBCEETT
T ss_pred ---------ccCCccccccHHhhhccc---Cc------cc------ccccc-cccceeccccch---hhccccccc
Confidence 124689999999998753 22 11 11222 468999999995 799887654
No 8
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=99.66 E-value=3.2e-18 Score=181.49 Aligned_cols=123 Identities=18% Similarity=0.236 Sum_probs=89.2
Q ss_pred eeecccceeEEEecccccCCCCCCCChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhcccc
Q psy4384 506 KLDLSLSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLESHEEELLTYRKLINLAN 585 (661)
Q Consensus 506 ~la~g~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~~~~~~l~~~~~~~~~~~ 585 (661)
.+++|+++||+|||+||||++++ ||++||||||||++|++ ++++|+++|+||+++++.+.+.
T Consensus 103 ll~~g~~~Vf~i~~~FRaE~~~t-~H~~EFtmLE~e~~~~~-~~~~m~~~E~li~~v~~~~~~~---------------- 164 (356)
T d1l0wa3 103 LMVAGLDRYFQIARCFRDEDLRA-DRQPDFTQLDLEMSFVE-VEDVLELNERLMAHVFREALGV---------------- 164 (356)
T ss_dssp HHHTTCSEEEEEEEEECCCCCCS-SCCSEEEEEEEEEESCC-HHHHHHHHHHHHHHHHHHHTCC----------------
T ss_pred hhhcccCcEEEEeccccccccCC-cchhhhhHHHHhhhHHH-HHHHHHHHHHHHHHHHHHHhCC----------------
Confidence 46889999999999999999986 69999999999999998 9999999999999998766442
Q ss_pred ccccccccCCcccccCHHHHHHHHHHcCCCC-------CCCCCCch--HHHHHHhhhccCceEEEEcCccccccccc
Q psy4384 586 ITDLQCIHDNPFIRMSYSAAVTILTRHGFDV-------NPDSGLSK--QHELFLVKYTNNVPIFIINWPKHVKPFYM 653 (661)
Q Consensus 586 ~~~l~~~~~~pf~rit~~EAi~lL~~~~i~~-------~~g~dl~~--~~E~~L~e~~~~~PvFv~~yP~~~~PFY~ 653 (661)
....+|+|++|.+|+..+....... .++.++.. ..|.... .....|+|+++||...++++.
T Consensus 165 ------~~~~~f~r~~~~~a~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~f~~~~p~~~~~~~~ 234 (356)
T d1l0wa3 165 ------ELPLPFPRLSYEEAMERYGSDKPDLRREGFRFLWVVDFPLLEWDEEEEA-WTYMHHPFTSPHPEDLPLLEK 234 (356)
T ss_dssp ------CCCSSCCEEEHHHHHHHHSSSSCCCSCCSCCEEEEECCBSBCCCTTTSC-CCBSSCTTBCBCSTTTTHHHH
T ss_pred ------CCCCCCCcchHHhhHHHHhcCcHhHHHHhhhhhhccccccccccchhcc-eeeeeCCcccCChhhhchhhc
Confidence 1346899999999998764332111 11111110 0011000 013468899999998766643
No 9
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=99.65 E-value=7.1e-18 Score=178.09 Aligned_cols=130 Identities=16% Similarity=0.162 Sum_probs=91.7
Q ss_pred eeeecccceeEEEecccccCCCCCCCChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhccc
Q psy4384 505 LKLDLSLSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLESHEEELLTYRKLINLA 584 (661)
Q Consensus 505 L~la~g~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~~~~~~l~~~~~~~~~~ 584 (661)
+.+++|+++||+|||+||||+++++ |+|||||||||++|++ ++++|+++|+||++++..+.+.
T Consensus 94 ~ll~~g~~~Vf~i~~~FR~E~~~~~-H~~EFtmLE~e~a~~~-~~~~m~~~E~li~~l~~~~~~~--------------- 156 (346)
T d1c0aa3 94 LLMMSGFDRYYQIVKCFRDEDLRAD-RQPEFTQIDVETSFMT-APQVREVMEALVRHLWLEVKGV--------------- 156 (346)
T ss_dssp HHHHTTCCEEEEEEEEECCCCCBTT-BCSEEEEEEEEEESCC-HHHHHHHHHHHHHHHHHHHHSC---------------
T ss_pred HHhhcCCCceEEEeeeccccccCch-hhhHhhhhcccccccc-HhHhHHHHHHHHHHHHHHHhCC---------------
Confidence 3577899999999999999999865 7799999999999998 9999999999999998766431
Q ss_pred cccccccccCCcccccCHHHHHHHHHHcCCCCCCCCCCchH------HHHHHhhhccCceEEEEcCcccccccccccCCC
Q psy4384 585 NITDLQCIHDNPFIRMSYSAAVTILTRHGFDVNPDSGLSKQ------HELFLVKYTNNVPIFIINWPKHVKPFYMKRSGE 658 (661)
Q Consensus 585 ~~~~l~~~~~~pf~rit~~EAi~lL~~~~i~~~~g~dl~~~------~E~~L~e~~~~~PvFv~~yP~~~~PFY~k~~~~ 658 (661)
...+|+++++.||+..+......+.....+... ......+.....+++++++|...+|||+..+++
T Consensus 157 --------~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~ 228 (346)
T d1c0aa3 157 --------DLGDFPVMTFAEAERRYGSDKPDLRDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPE 228 (346)
T ss_dssp --------CCCSCCEEEHHHHHHHHSCSSCCTTCSSCCCEEEEECCBSEEECSSSCEEESSCTTBCBSSCCHHHHHHSCT
T ss_pred --------cCCccceeeHHHHHHHhcccccchhhHhhhhhhccccccccchhcccceeeeEeeccccchhhHHHhccCCc
Confidence 124789999999987764433222111111100 000001111224566678999999998877665
Q ss_pred C
Q psy4384 659 D 659 (661)
Q Consensus 659 d 659 (661)
+
T Consensus 229 ~ 229 (346)
T d1c0aa3 229 N 229 (346)
T ss_dssp T
T ss_pred c
Confidence 3
No 10
>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=2e-09 Score=103.02 Aligned_cols=143 Identities=18% Similarity=0.217 Sum_probs=103.5
Q ss_pred ceEeCcCCCCCCeEEeCCCcEEEe-------------CCCeeEEEEeEEEeCCeEEEEEEEEeeCCCCcEEEEEeCCCCC
Q psy4384 263 HVLLALHDRAPQLRISEDRLAVTG-------------DKGYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYAN 329 (661)
Q Consensus 263 ~v~~s~~dr~~~l~ls~d~l~v~~-------------~~g~~~vRa~~~v~~G~~YfEv~i~~~~~~~~vriG~a~~~~~ 329 (661)
.++|++.-.++.|.||+|+.+|+- ...+..|.++.++.+|++||||.|.. ...++||++....+
T Consensus 11 dvtLDp~TAh~~L~lS~d~~~V~~~~~~~~~p~~p~rF~~~~~VLg~~~fssGrHYWEV~V~~---~~~w~vGV~~~sv~ 87 (188)
T d2fbea1 11 DMTFDVDTANNYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGT---SQVWDVGVCKESVN 87 (188)
T ss_dssp CCCEETTTCCTTEEECTTSSEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSEEEEEEECTT---CSEEEEEEEETTSC
T ss_pred eeEcCCCCCCCCEEEccCCcEEEECCcCCCCCCCcccccceeeccccccccCCCEEEEEEeee---CCeEEEEEEeCCcC
Confidence 467899999999999999999963 12566799999999999999999854 66899999998876
Q ss_pred CCCCCCC--cCccEEEEcCCCcEE--eCCCCcccCCCCCCCCEEEEEeeCCCCCCCCCCCCccCCccccccccccchhcc
Q psy4384 330 LQTPLGY--DKFGYSWRSRKGTRF--HECRGKHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEK 405 (661)
Q Consensus 330 l~~pvG~--d~~syg~~~~~G~~~--h~s~~~~yg~~~~~GDVIG~~i~l~~~~~~~~~~~~~~d~~~i~~k~~~~~e~~ 405 (661)
....++. +..+|.+.-.+|..+ |++....-. .-....+||++||++.
T Consensus 88 Rk~~~~~~~~~~~w~l~~~~~~~~~~~~~~~~~l~-~~~~~~rVGV~LDye~---------------------------- 138 (188)
T d2fbea1 88 RQGKIELSSEHGFLTVGCREGKVFAASTVPMTPLW-VSPQLHRVGIFLDVGM---------------------------- 138 (188)
T ss_dssp CSSCCCCCTTTTEEEEEEETTTEEEECSSSCEEEC-CCTTCCEEEEEEETTT----------------------------
T ss_pred cCcccccCCCCCCEEEEecCCcEEEecCCCceeec-cCCCCCEEEEEEEcCC----------------------------
Confidence 6544544 445677665566544 344332221 1235789999999988
Q ss_pred chhhHHHhhcccCCCcEEEEEE--CCeeccccceec-cCCceEEEEEecCC
Q psy4384 406 DKVTEALKRLQTLDQSQIVFYK--NGKSQGVAFQDI-YAGYYYPCVSLHKN 453 (661)
Q Consensus 406 d~~~~~~~~~~~~~~s~I~f~k--NG~~~G~AF~~i-~~g~yyPavSl~~g 453 (661)
++|.||- ++..+-+ |... +.+.+||+.++..+
T Consensus 139 ---------------G~lSFyn~~~~~~L~t-F~~~~F~~pl~P~F~~~~~ 173 (188)
T d2fbea1 139 ---------------RSIAFYNVSDGCHIYT-FIEIPVCEPWRPFFAHKRG 173 (188)
T ss_dssp ---------------TEEEEEETTTTEEEEE-ECSCCCSSCEEEEEEEECS
T ss_pred ---------------CEEEEEeCCCCcEEEE-ECCCCCCCCEeCeEECcCC
Confidence 8999984 3343322 4432 35799999999654
No 11
>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88 E-value=8.2e-09 Score=97.86 Aligned_cols=141 Identities=18% Similarity=0.232 Sum_probs=101.8
Q ss_pred eEeCcCCCCCCeEEeCCCcEEEeC-------------CCeeEEEEeEEEeCCeEEEEEEEEeeCCCCcEEEEEeCCCCCC
Q psy4384 264 VLLALHDRAPQLRISEDRLAVTGD-------------KGYCMVRATNYVGHGTWYWEATIEEMPEGSATRMGWGQEYANL 330 (661)
Q Consensus 264 v~~s~~dr~~~l~ls~d~l~v~~~-------------~g~~~vRa~~~v~~G~~YfEv~i~~~~~~~~vriG~a~~~~~l 330 (661)
++|+++-.++.|.||+|+.+|+.. ..+..|.++.++.+|++||||.|.. ...++||++....+.
T Consensus 3 lTLDp~TAh~~L~lS~d~~~V~~~~~~~~~p~~p~RF~~~~~VLg~~~f~sG~HYWEVeV~~---~~~w~vGV~~~s~~R 79 (179)
T d2iwgb1 3 ITLDPDTANPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTG---KEAWDLGVCRDSVRR 79 (179)
T ss_dssp CCBCTTTCCTTEEECTTSCEEEECSSCCCCCCCTTSCCSSSCEEBSCCBSSSEEEEEEECTT---CSCEEEEEEETTCCC
T ss_pred eEECCCcCCCCEEEcCCCCEEEECCcCcCCCCCcccccccccccccccccCCCEEEEEEEee---CCeEEEEEEcCccCc
Confidence 567888889999999999999741 2466899999999999999999943 678999999877665
Q ss_pred CC--CCCCcCccEEEEcCCCcEE--eCCCCcccCCCCCCCCEEEEEeeCCCCCCCCCCCCccCCccccccccccchhccc
Q psy4384 331 QT--PLGYDKFGYSWRSRKGTRF--HECRGKHYSEGYSEGDTLGFLIHLPYRNQNSYVPRTFKDKPLVKFKCHLYYEEKD 406 (661)
Q Consensus 331 ~~--pvG~d~~syg~~~~~G~~~--h~s~~~~yg~~~~~GDVIG~~i~l~~~~~~~~~~~~~~d~~~i~~k~~~~~e~~d 406 (661)
.. .+|-+..+|++.-.+|..+ |........- -..-.+||++||++.
T Consensus 80 k~~~~~~~~~~~W~l~~~~~~~~~~~~~~~~~l~~-~~~~~riGV~LD~e~----------------------------- 129 (179)
T d2iwgb1 80 KGHFLLSSKSGFWTIWLWNKQKYEAGTYPQTPLHL-QVPPCQVGIFLDYEA----------------------------- 129 (179)
T ss_dssp SSCCCCCTTTTEEEEEEETTTEEEECCSSCEEECC-SSCCSEEEEEEETTT-----------------------------
T ss_pred CcccccCCCCCEEEEEEeCCceEEEecCCCEeEcc-ccCccEEEEEEecCC-----------------------------
Confidence 44 3556667898765556544 3333333321 124468999999988
Q ss_pred hhhHHHhhcccCCCcEEEEEE--CCeecccccee-ccCCceEEEEEec
Q psy4384 407 KVTEALKRLQTLDQSQIVFYK--NGKSQGVAFQD-IYAGYYYPCVSLH 451 (661)
Q Consensus 407 ~~~~~~~~~~~~~~s~I~f~k--NG~~~G~AF~~-i~~g~yyPavSl~ 451 (661)
+.|.||- +...+=-.|.+ -+.+.+||+.++.
T Consensus 130 --------------G~lsFy~v~~~~~li~tf~~~~F~~pl~P~F~~~ 163 (179)
T d2iwgb1 130 --------------GMVSFYNITDHGSLIYSFSECAFTGPLRPFFSPG 163 (179)
T ss_dssp --------------TEEEEEETTTTTEEEEEECCCCCCSCEEEEEECC
T ss_pred --------------CEEEEEeCCCCCeEEEEeCCcCCCCCeECeEECc
Confidence 8999994 22222224654 3568999999985
No 12
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.63 E-value=4.8e-06 Score=67.76 Aligned_cols=43 Identities=26% Similarity=0.638 Sum_probs=31.8
Q ss_pred CCccccceEecccccchhhHhhhccccCCccccceeEEEEcccCCC
Q psy4384 3 ERNFNLIELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSN 48 (661)
Q Consensus 3 ~~~~~~~~lqC~~C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~~ 48 (661)
+.+.+..||||+.|.+|||..|+++.... .+ ..-.|+|..|..
T Consensus 20 ~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~-~~--~~~~~~C~~C~~ 62 (79)
T d1wepa_ 20 PYNVNHFMIECGLCQDWFHGSCVGIEEEN-AV--DIDIYHCPDCEA 62 (79)
T ss_dssp SCCSSSCEEEBTTTCCEEEHHHHTCCHHH-HT--TCSBBCCTTTTT
T ss_pred ccCCCCcEEECCCCCCcEeccccCcchhc-CC--CCCEEECccCcC
Confidence 34567789999999999999999976422 11 112478999974
No 13
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.40 E-value=1.2e-05 Score=63.95 Aligned_cols=42 Identities=26% Similarity=0.658 Sum_probs=32.1
Q ss_pred CCccccceEecccccchhhHhhhccccCCccccceeEEEEcccCCC
Q psy4384 3 ERNFNLIELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSN 48 (661)
Q Consensus 3 ~~~~~~~~lqC~~C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~~ 48 (661)
..+.+..||||+.|.+|||..|+........+ ..|+|..|..
T Consensus 24 ~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~----~~~~C~~C~~ 65 (72)
T d1weea_ 24 KDDDGERMLACDGCGVWHHTRCIGINNADALP----SKFLCFRCIE 65 (72)
T ss_dssp CSCCSSCEEECSSSCEEEETTTTTCCTTSCCC----SCCCCHHHHH
T ss_pred CcCCCCeEEEeCCCCCcCchhhcCCccccCCC----CcEECcCCcC
Confidence 34556789999999999999999876544233 3588999963
No 14
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.17 E-value=2e-05 Score=61.17 Aligned_cols=42 Identities=24% Similarity=0.615 Sum_probs=31.0
Q ss_pred CccccceEecccccchhhHhhhccccCCccccceeEEEEcccCCC
Q psy4384 4 RNFNLIELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSN 48 (661)
Q Consensus 4 ~~~~~~~lqC~~C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~~ 48 (661)
.+.+..||||+.|.+|||..|++..... . .....|.|..|..
T Consensus 16 ~~~~~~~I~Cd~C~~w~H~~C~~~~~~~-~--~~~~~w~C~~C~~ 57 (64)
T d1we9a_ 16 YAADEFWICCDLCEMWFHGKCVKITPAR-A--EHIKQYKCPSCSN 57 (64)
T ss_dssp CCSSSCEEECSSSCCEEETTTTTCCTTG-G--GGCSSCCCHHHHT
T ss_pred CCCCCCEEEcCCCCccCCcccCCcChHH-C--CCCCeEECcCCcC
Confidence 3556789999999999999999875432 1 1223588999974
No 15
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.88 E-value=2e-05 Score=63.29 Aligned_cols=41 Identities=27% Similarity=0.706 Sum_probs=29.7
Q ss_pred ccceEecccccchhhHhhhccccCC-ccccceeEEEEcccCC
Q psy4384 7 NLIELFCANCKCWFHESCISYQIGK-LVPFMMNYVFICKNCS 47 (661)
Q Consensus 7 ~~~~lqC~~C~~wfH~~C~~~~~~~-~l~~~~~y~F~C~~C~ 47 (661)
...||||+.|.+|||..|+++.... .++-.....|+|..|.
T Consensus 27 ~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~ 68 (76)
T d1wema_ 27 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68 (76)
T ss_dssp SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHH
T ss_pred CCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCc
Confidence 3469999999999999999864321 1222334568999996
No 16
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.67 E-value=7.6e-05 Score=60.20 Aligned_cols=39 Identities=21% Similarity=0.530 Sum_probs=28.2
Q ss_pred ceEec--ccccchhhHhhhccccCCc-cccceeEEEEcccCC
Q psy4384 9 IELFC--ANCKCWFHESCISYQIGKL-VPFMMNYVFICKNCS 47 (661)
Q Consensus 9 ~~lqC--~~C~~wfH~~C~~~~~~~~-l~~~~~y~F~C~~C~ 47 (661)
.|++| ++|++|||.+|+++...+. .+......|+|..|.
T Consensus 29 ~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~ 70 (78)
T d1wewa_ 29 SMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICR 70 (78)
T ss_dssp CEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHH
T ss_pred cEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCc
Confidence 45555 5999999999998754321 234456689999996
No 17
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.72 E-value=0.001 Score=50.77 Aligned_cols=36 Identities=22% Similarity=0.654 Sum_probs=27.9
Q ss_pred ceEecccccchhhHhhhccccCCccccceeEEEEcccCCC
Q psy4384 9 IELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSN 48 (661)
Q Consensus 9 ~~lqC~~C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~~ 48 (661)
.||+|+.|.+|||..|+...... +|-+ .|.|..|..
T Consensus 20 ~lv~Cd~C~~~~H~~C~~~~~~~-~~~~---~W~C~~C~~ 55 (61)
T d1mm2a_ 20 ELLCCDTCPSSYHIHCLNPPLPE-IPNG---EWLCPRCTC 55 (61)
T ss_dssp SCBCCSSSCCCBCSSSSSSCCSS-CCSS---CCCCTTTTT
T ss_pred eEEEeCCCCccCchhhcCCCcCc-CCCC---cEECCCCcC
Confidence 49999999999999999865543 3433 367999974
No 18
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.61 E-value=0.00034 Score=57.47 Aligned_cols=40 Identities=20% Similarity=0.447 Sum_probs=28.9
Q ss_pred cceEecccccchhhHhhhccccCCccccceeEEEEcccCC
Q psy4384 8 LIELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCS 47 (661)
Q Consensus 8 ~~~lqC~~C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~ 47 (661)
..||+|+.|.+|||..|+.......+..+....+.|..|.
T Consensus 31 ~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~ 70 (88)
T d1weva_ 31 NQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCT 70 (88)
T ss_dssp CCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHH
T ss_pred CeEEEcCCCCCccccccCCCcccccccccCCCeEECcccC
Confidence 4699999999999999998543221223334566799996
No 19
>d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]}
Probab=95.53 E-value=0.0051 Score=60.31 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=41.1
Q ss_pred eeEEEecccccCCCCCCCChhhhhcceeeeccCC-hHHHHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLD-NIHDLCNTIEQFIKSVL 563 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d-~~~dlm~~~E~Li~~i~ 563 (661)
+++.+|+|||+|..|.+ |+|+|.++|.-..-.+ ++.+++..++++++.++
T Consensus 111 ~~~~~g~VyRrd~iD~t-H~p~FhQ~eg~~vd~~~~~~~Lk~~l~~~~~~~f 161 (266)
T d1jjca_ 111 RIVVPGRVFRFEQTDAT-HEAVFHQLEGLVVGEGIAMAHLKGAIYELAQALF 161 (266)
T ss_dssp EEEEEEEEECCSCCCSS-CCSEEEEEEEEEEETTCCHHHHHHHHHHHHHHHH
T ss_pred eEEecccceecCCCCCc-ccccceeeeeeeccccccHHHHHHHHHHHHHHhc
Confidence 78999999999999865 9999999998776522 37788888888777765
No 20
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=95.17 E-value=0.0017 Score=47.62 Aligned_cols=34 Identities=29% Similarity=0.634 Sum_probs=25.3
Q ss_pred cceEeccc---ccchhhHhhhccccCCccccceeEEEEcccCC
Q psy4384 8 LIELFCAN---CKCWFHESCISYQIGKLVPFMMNYVFICKNCS 47 (661)
Q Consensus 8 ~~~lqC~~---C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~ 47 (661)
-.|++|+. |.+|||..|+++.. .|-+. |.|..|.
T Consensus 13 ~~mi~Cd~~~C~~~WfH~~Cvgl~~---~p~~~---w~C~~C~ 49 (51)
T d2pnxa1 13 GEMIGCDNPDCSIEWFHFACVGLTT---KPRGK---WFCPRCS 49 (51)
T ss_dssp SEEEECSCTTCSSCEEEGGGGTCSS---CCSSC---CCCHHHH
T ss_pred CCEEEEecCCCCCCCEeCCccCCCc---CCCCc---EECcCCC
Confidence 34899887 68999999999765 34343 5588886
No 21
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.14 E-value=0.0036 Score=45.65 Aligned_cols=37 Identities=24% Similarity=0.503 Sum_probs=28.2
Q ss_pred cceEecccccchhhHhhhccccCCccccceeEEEEcccCCC
Q psy4384 8 LIELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSN 48 (661)
Q Consensus 8 ~~~lqC~~C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~~ 48 (661)
..||+|+.|.+|||..|++.+... +|- ..+.|..|.+
T Consensus 13 ~~~i~Cd~C~~~~H~~C~~p~~~~-~p~---~~W~C~~C~~ 49 (51)
T d1f62a_ 13 DKLILCDECNKAFHLFCLRPALYE-VPD---GEWQCPACQP 49 (51)
T ss_dssp SCCEECTTTCCEECHHHHCTTCCS-CCS---SCCSCTTTSC
T ss_pred CCEEEcCCCCCCCCCCCCCCCCCc-CCC---CCEECcCCcC
Confidence 468999999999999999865433 332 2466998874
No 22
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.76 E-value=0.0085 Score=46.91 Aligned_cols=35 Identities=31% Similarity=0.672 Sum_probs=25.1
Q ss_pred cceEecccc-cchhhHhhhccccCCccccceeEEEEcccCCC
Q psy4384 8 LIELFCANC-KCWFHESCISYQIGKLVPFMMNYVFICKNCSN 48 (661)
Q Consensus 8 ~~~lqC~~C-~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~~ 48 (661)
.+|.+|+.| ..|||..|+.+.. .|-+ .|.|..|..
T Consensus 29 ~i~c~~~~C~~~wfH~~Cvgl~~---~p~~---~w~C~~C~~ 64 (71)
T d1wesa_ 29 MIGCDNEQCPIEWFHFSCVSLTY---KPKG---KWYCPKCRG 64 (71)
T ss_dssp EECCSCTTCSCCCEETTTTTCSS---CCSS---CCCCTTTSS
T ss_pred EEEEECCCCCCcCccCccCCCCc---CCCC---cEECcCCcc
Confidence 445556777 5799999998654 4444 488999973
No 23
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.71 E-value=0.0082 Score=46.75 Aligned_cols=36 Identities=25% Similarity=0.537 Sum_probs=27.0
Q ss_pred ceEecccccchhhHhhhccccCCccccceeEEEEcccCCC
Q psy4384 9 IELFCANCKCWFHESCISYQIGKLVPFMMNYVFICKNCSN 48 (661)
Q Consensus 9 ~~lqC~~C~~wfH~~C~~~~~~~~l~~~~~y~F~C~~C~~ 48 (661)
.||.|+.|.+|||..|+...... +|.. .+.|..|..
T Consensus 18 ~ll~Cd~C~~~~H~~C~~p~l~~-~p~~---~W~C~~C~~ 53 (70)
T d1fp0a1 18 DLVMCNQCEFCFHLDCHLPALQD-VPGE---EWSCSLCHV 53 (70)
T ss_dssp CCEECTTSSCEECTTSSSTTCCC-CCSS---SCCCCSCCC
T ss_pred EEEECCCCChhhccccCCCCcCc-CCCC---CEECcCCcC
Confidence 48999999999999999854333 3432 266999974
No 24
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.45 E-value=0.72 Score=37.72 Aligned_cols=69 Identities=16% Similarity=0.215 Sum_probs=49.6
Q ss_pred cCChHHHHHHHhhhccccccccCCCccccccccccHHHHHhchhhccCCCccccchHHHHHHHHHhcCCCceEee-----
Q psy4384 58 QAMFPQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILRALAKETNVLFTC----- 132 (661)
Q Consensus 58 ~~~w~~~~~laLynL~~~~~~~~~~k~yF~~~~dI~~fi~~~W~~L~~~~r~~~~~w~~~i~~~L~~~~~~~F~~----- 132 (661)
+.+.++|+.+||-+-- .+.-.+. ||+.||.+|+..... ....|+..|--.||.+ ..|+-
T Consensus 5 ~~sY~~LI~~Ai~~sp---------~~~ltL~-eIy~~i~~~fpyfr~----~~~gWkNSIRHnLS~n--~~F~kv~r~~ 68 (98)
T d2c6ya1 5 PYSYAQLIVQAITMAP---------DKQLTLN-GIYTHITKNYPYYRT----ADKGWQNSIRHNLSLN--RYFIKVPRSQ 68 (98)
T ss_dssp SSCHHHHHHHHHHTST---------TSCEEHH-HHHHHHHHHCTTSCT----TCHHHHHHHHHHHHHS--TTEEEECCCT
T ss_pred CccHHHHHHHHHHhCC---------CCCccHH-HHHHHHHHhCccccc----CCCCcchhhchhcccc--cceEeccCCC
Confidence 4678889999987632 2233455 999999999998863 2358999999999987 66752
Q ss_pred cCCcc--eeeec
Q psy4384 133 NESQE--QYGLI 142 (661)
Q Consensus 133 g~~~~--~w~L~ 142 (661)
++..+ +|.|.
T Consensus 69 ~~~gKg~~W~l~ 80 (98)
T d2c6ya1 69 EEPGKGSFWRID 80 (98)
T ss_dssp TSCCSSCEEEEC
T ss_pred CCCCCCceEEEC
Confidence 22223 89883
No 25
>d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.18 E-value=0.57 Score=37.07 Aligned_cols=68 Identities=12% Similarity=0.197 Sum_probs=49.9
Q ss_pred cCChHHHHHHHhhhccccccccCCCccccccccccHHHHHhchhhccCCCccccchHHHHHHHHHhcCCCceEeecCCcc
Q psy4384 58 QAMFPQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILRALAKETNVLFTCNESQE 137 (661)
Q Consensus 58 ~~~w~~~~~laLynL~~~~~~~~~~k~yF~~~~dI~~fi~~~W~~L~~~~r~~~~~w~~~i~~~L~~~~~~~F~~g~~~~ 137 (661)
+.+.++|+..||-+--.. --.+. ||+.||.+|+..... ....|+..|--.||.+ ..|+--...+
T Consensus 4 ~~sY~~LI~~Ai~~sp~~---------~LtL~-eIy~~i~~~fpyyr~----~~~gWkNSIRHnLS~n--~~F~kv~~~k 67 (82)
T d2a07f1 4 PFTYATLIRQAIMESSDR---------QLTLN-EIYSWFTRTFAYFRR----NAATWKNAVRHNLSLH--KCFVRVENVK 67 (82)
T ss_dssp SCCHHHHHHHHHHHSTTS---------CBCHH-HHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHC--TTBCCEECSS
T ss_pred CCcHHHHHHHHHHhCCCC---------CccHH-HHHHHHHHhCccccc----CCcccchhHhHhcccc--cceEeCCCCC
Confidence 467889999998764322 22354 999999999998863 2348999999999997 7885333333
Q ss_pred --eeee
Q psy4384 138 --QYGL 141 (661)
Q Consensus 138 --~w~L 141 (661)
+|+|
T Consensus 68 G~~W~i 73 (82)
T d2a07f1 68 GAVWTV 73 (82)
T ss_dssp SEECCB
T ss_pred CCEEEE
Confidence 8876
No 26
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=80.26 E-value=0.59 Score=46.52 Aligned_cols=51 Identities=18% Similarity=0.158 Sum_probs=36.9
Q ss_pred eeEEEecccccCCCCCCCC---hhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSKSRLH---LAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRV 566 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~RH---l~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v 566 (661)
+++|||.+||+|-+. +.. .-||||.|+|.- ++ -++..+.....+..+.+.+
T Consensus 148 ~~aqig~~fR~E~s~-~~gl~RvReFtq~D~~~F-~~-~~q~~~~~~~~~~~~~~~~ 201 (331)
T d1b76a2 148 GIAQIGKAFRNEITP-RNFIFRVREFEQMEIEYF-VR-PGEDEYWHRYWVEERLKWW 201 (331)
T ss_dssp EEEEEEEEECCCSSC-CTTTTSCSEEEEEEEEEE-EC-GGGHHHHHHHHHHHHHHHH
T ss_pred hhhhccceecccccc-cccccccchhhhhhhhhh-cC-CcchhHHHHHHHHHHHHHH
Confidence 789999999999863 222 349999999984 44 4677777666666655544
No 27
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.03 E-value=0.92 Score=36.75 Aligned_cols=72 Identities=18% Similarity=0.184 Sum_probs=50.8
Q ss_pred eccCChHHHHHHHhhhccccccccCCCccccccccccHHHHHhchhhccCCCccccchHHHHHHHHHhcCCCceEee---
Q psy4384 56 KNQAMFPQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILRALAKETNVLFTC--- 132 (661)
Q Consensus 56 r~~~~w~~~~~laLynL~~~~~~~~~~k~yF~~~~dI~~fi~~~W~~L~~~~r~~~~~w~~~i~~~L~~~~~~~F~~--- 132 (661)
|=+.+.++|+.+||-+-- .+--.+. +|+.||.+|+...-. ....|+..|--.||.+ ..|+-
T Consensus 4 KP~~SYa~LI~~AI~~sp---------~~~ltL~-eIY~~i~~~fpyfr~----~~~gWkNSIRHnLSln--~~F~kv~~ 67 (94)
T d1d5va_ 4 KPPYSYIALITMAIQNAP---------EKKITLN-GIYQFIMDRFPFYRE----NKQGWQNSIRHNLSLN--ECFVKVPR 67 (94)
T ss_dssp CCSSCHHHHHHHHHHTCS---------SSSBCHH-HHHHHHHHHCTHHHH----CCTTHHHHHHHHHHHC--SSEEECCC
T ss_pred CCCCCHHHHHHHHHHhCC---------CCCccHH-HHHHHHHHHCCccCc----cccchHHHHHHHcccc--ceEEEcCc
Confidence 335678899999987622 2223355 999999999998863 2358999999999987 67752
Q ss_pred --cCCcc--eeeecC
Q psy4384 133 --NESQE--QYGLID 143 (661)
Q Consensus 133 --g~~~~--~w~L~~ 143 (661)
+...+ +|.|..
T Consensus 68 ~~~~~gkg~~W~l~p 82 (94)
T d1d5va_ 68 DDKKPGKGSYWTLDP 82 (94)
T ss_dssp CTTSCSCCCCEEECC
T ss_pred CCCCCCCCceEEECc
Confidence 11122 888854
No 28
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]}
Probab=79.92 E-value=0.88 Score=44.42 Aligned_cols=37 Identities=22% Similarity=0.191 Sum_probs=26.1
Q ss_pred ccceeEEEecccccCCCCCCCChhhhhcceeeeccCCh
Q psy4384 510 SLSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDN 547 (661)
Q Consensus 510 g~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~ 547 (661)
...|+|++|+|||.|..... +..||+++.+|.-+.++
T Consensus 95 ~~~r~~Y~g~vfR~~~~~~~-r~rE~~Q~g~EiiG~~~ 131 (318)
T d1z7ma1 95 TSARYSYFGKIFRKEKRHKG-RSTENYQIGIELFGESA 131 (318)
T ss_dssp CCEEEEEEEECCCCCC--------CCEEEEEEEESSCH
T ss_pred CCcccccccceeEEcccccc-ccchhhhhheeccccch
Confidence 34589999999999986543 56799999999988763
No 29
>d3bpya1 a.4.5.14 (A:93-177) Afx (Foxo4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.70 E-value=2.2 Score=33.70 Aligned_cols=63 Identities=11% Similarity=0.172 Sum_probs=46.5
Q ss_pred ccCChHHHHHHHhhhccccccccCCCccccccccccHHHHHhchhhccCC-CccccchHHHHHHHHHhcCCCceEe
Q psy4384 57 NQAMFPQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTT-PRRVTQSWHLTILRALAKETNVLFT 131 (661)
Q Consensus 57 ~~~~w~~~~~laLynL~~~~~~~~~~k~yF~~~~dI~~fi~~~W~~L~~~-~r~~~~~w~~~i~~~L~~~~~~~F~ 131 (661)
...+.++|+..||-+-- .+--.+. ||+.||.+|+...-.. +...+..|+..|--.||.+ ..|+
T Consensus 6 ~~~SY~~LI~~Ai~~sp---------~~~ltL~-eIY~~i~~~fPyyr~~~~~~~~~gWkNSIRHnLSl~--~~F~ 69 (85)
T d3bpya1 6 GNQSYAELISQAIESAP---------EKRLTLA-QIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNLSLH--SKFI 69 (85)
T ss_dssp BSCCHHHHHHHHHHHST---------TSCBCHH-HHHHHHHHHCGGGTTCTTCCTTSHHHHHHHHHHHHC--TTEE
T ss_pred CCcCHHHHHHHHHHhCC---------CCCccHH-HHHHHHHHhChhhhccCcccccccchhhHHHHhhHh--hhee
Confidence 34578999999987632 1223354 9999999999998532 1234569999999999987 7785
No 30
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]}
Probab=76.75 E-value=0.68 Score=45.24 Aligned_cols=53 Identities=17% Similarity=0.274 Sum_probs=38.0
Q ss_pred eeEEEecccccCCCCCC---CChhhhhcceeeeccCChHHHHHHHHHHHHHHHHHHHhh
Q psy4384 513 KVYTLNPTFRAENSKSR---LHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLNRVLE 568 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~---RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~~v~~ 568 (661)
++|+|+++||+|.+... .=.-||+|-|.+. |+. -++.++.++++++.+. .+..
T Consensus 113 ~~~q~~~~fR~E~~~~~~Gl~R~reF~~~d~h~-f~~-~e~~~~e~~~~~~~~~-~i~~ 168 (291)
T d1qf6a4 113 RMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHI-FCT-EEQIRDEVNGCIRLVY-DMYS 168 (291)
T ss_dssp EEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEE-EEC-GGGHHHHHHHHHHHHH-HHHG
T ss_pred eEeecceeeecccccccccccccccceecccee-Eec-chhhHHHHHHHHHHHH-HHHH
Confidence 67999999999964321 1357999999999 554 3677788887775544 4544
No 31
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=75.70 E-value=0.79 Score=44.73 Aligned_cols=48 Identities=8% Similarity=0.189 Sum_probs=35.8
Q ss_pred eeEEEecccccCCCCCCC---ChhhhhcceeeeccCChHHHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSKSRL---HLAEFYMIEAELAFLDNIHDLCNTIEQFIKSV 562 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~R---Hl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i 562 (661)
|+|++++|||+|.+...+ =.-||+|.|.+.- +. -++..+.+++++..+
T Consensus 115 r~~~~~~~fR~E~~~~~~Gl~Rvr~F~~~d~~~f-~~-~eq~~~e~~~~~~~~ 165 (291)
T d1nyra4 115 RIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIF-VR-PDQIKEEFKRVVNMI 165 (291)
T ss_dssp EEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEE-EC-GGGHHHHHHHHHHHH
T ss_pred EEeeccceeecCCCcccccccceeeeeeeeheee-cC-CcccHHHHHHHHHHH
Confidence 789999999999864321 2359999999884 55 567777777776554
No 32
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=72.42 E-value=1.4 Score=43.00 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=25.1
Q ss_pred ceeEEEecccccCCCCCCCChhhhhcceeeeccCChH
Q psy4384 512 SKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNI 548 (661)
Q Consensus 512 ~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~ 548 (661)
-|+|++|+|||.+..... +.-||+++.+|.-+.++.
T Consensus 102 ~R~~Y~g~VfR~~~~~~~-~~rE~~Q~G~EiiG~~~~ 137 (325)
T d1qe0a2 102 IKLYYNGPMFRYERKQKG-RYRQFNQFGVEAIGAENP 137 (325)
T ss_dssp EEEEEEEEEECC--------CCEEEEEEEEEESCCCH
T ss_pred hhhheecceeeeccccCC-ccceeeecceeecCCcCc
Confidence 389999999999987655 447999999999887643
No 33
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=70.98 E-value=1.4 Score=35.73 Aligned_cols=69 Identities=14% Similarity=0.131 Sum_probs=48.9
Q ss_pred cCChHHHHHHHhhhccccccccCCCccccccccccHHHHHhchhhccCCCccccchHHHHHHHHHhcCCCceEee-cCC-
Q psy4384 58 QAMFPQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILRALAKETNVLFTC-NES- 135 (661)
Q Consensus 58 ~~~w~~~~~laLynL~~~~~~~~~~k~yF~~~~dI~~fi~~~W~~L~~~~r~~~~~w~~~i~~~L~~~~~~~F~~-g~~- 135 (661)
+.+.++|+.+||-+-- .+--.+. ||+.||.+||...-. ....|+..|--.||.+ ..|+- .++
T Consensus 4 p~sY~~LI~~Ai~~sp---------~~~ltL~-eIY~~i~~~fpyfr~----~~~gWkNSIRHnLSln--~~F~kv~~~~ 67 (97)
T d2hdca_ 4 PYSYIALITMAILQSP---------QKKLTLS-GICEFISNRFPYYRE----KFPAWQNSIRHNLSLN--DCFVKIPREP 67 (97)
T ss_dssp CCCHHHHHHHHHHTCT---------TTCBCHH-HHHHHHHHHCHHHHH----HCSSHHHHHHHHHHHH--HCCEEECSCT
T ss_pred CCcHHHHHHHHHHhCC---------CcCccHH-HHHHHHHHhCccccC----CCCCchhhhhhhcchh--hhhcccCCCC
Confidence 4677889988877632 2223354 999999999998853 3459999999999987 78852 222
Q ss_pred ---cc--eeeec
Q psy4384 136 ---QE--QYGLI 142 (661)
Q Consensus 136 ---~~--~w~L~ 142 (661)
.+ +|.|.
T Consensus 68 ~~~gKg~~W~l~ 79 (97)
T d2hdca_ 68 GNPGKGNYWTLD 79 (97)
T ss_dssp TCSSSCCEEECC
T ss_pred CCCCCCcEEEEC
Confidence 12 88774
No 34
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=62.98 E-value=3.4 Score=31.81 Aligned_cols=55 Identities=13% Similarity=0.147 Sum_probs=39.2
Q ss_pred HHHHHHHhhhccccccccCCCccccccccccHHHHHhchhhccCCCccccchHHHHHHHHHhcCCCceEee
Q psy4384 62 PQMCITAIGNLMQTSIKEGNPRFTFSKEKEIIPFIEAHWDGMTTTPRRVTQSWHLTILRALAKETNVLFTC 132 (661)
Q Consensus 62 ~~~~~laLynL~~~~~~~~~~k~yF~~~~dI~~fi~~~W~~L~~~~r~~~~~w~~~i~~~L~~~~~~~F~~ 132 (661)
++|+.+||-+-. .+--.+. +|+.||.+|+..... . ...|+..|--.||.+ +.|+-
T Consensus 2 ~~LI~~Ai~~sp---------~~~ltL~-eIy~~i~~~fpy~r~-~---~~gWkNSIRHnLS~n--~~F~k 56 (75)
T d1kq8a_ 2 IALITMAIRDSA---------GGRLTLA-EINEYLMGKFPFFRG-S---YTGWRNSVRHNLSLN--DCFVK 56 (75)
T ss_dssp HHHHHHHHTTSS---------SSCBCHH-HHHHHHHHHCTTGGG-T---CSCCHHHHHHHHHHH--TCCEE
T ss_pred HHHHHHHHHhCC---------CCCccHH-HHHHHHHHhCccccc-C---CccchhHhheccccc--ceeEe
Confidence 456666665421 2223344 999999999999863 2 348999999999997 78853
No 35
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=58.78 E-value=3.8 Score=39.77 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=30.6
Q ss_pred cceeEEEecccccCCCCCCCChhhhhcceeeeccCChH
Q psy4384 511 LSKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNI 548 (661)
Q Consensus 511 ~~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~ 548 (661)
--|.|++|+|||.+..... +.-||+++.+|.-+.++.
T Consensus 97 p~k~~y~g~VfR~~~~~~g-~~re~~Q~G~EiiG~~~~ 133 (327)
T d1wu7a2 97 PLRWYSFPKVWRYEEPQAG-RYREHYQFNADIFGSDSP 133 (327)
T ss_dssp SEEEEECCEEECCCCSCSS-CCSEEEEEEEEEESCCSH
T ss_pred cceeeccCcceeccccccC-CcchhhhhhhhhcCCcch
Confidence 3489999999999987644 667999999999887743
No 36
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]}
Probab=57.07 E-value=3.5 Score=41.55 Aligned_cols=32 Identities=28% Similarity=0.469 Sum_probs=23.7
Q ss_pred eeEEEecccccCCCCCCC---ChhhhhcceeeeccCC
Q psy4384 513 KVYTLNPTFRAENSKSRL---HLAEFYMIEAELAFLD 546 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~R---Hl~EFtmLE~e~a~~d 546 (661)
.|.|||++||||=+ .+. -+-||+|+|+|. |++
T Consensus 211 GiAQIGk~FRNEIs-Pr~~l~R~REF~q~EiE~-Fv~ 245 (394)
T d1atia2 211 GIAQIGKAFRNEIT-PRNFIFRVREFEQMEIEY-FVR 245 (394)
T ss_dssp EEEEEEEEEBCCSS-CCTGGGSCSEEEEEEEEE-EEC
T ss_pred eeeeeccccccccC-cccCCcccccceeeeeEE-EEe
Confidence 36799999999953 221 346999999998 444
No 37
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.04 E-value=3.3 Score=40.03 Aligned_cols=50 Identities=8% Similarity=0.070 Sum_probs=33.6
Q ss_pred eeEEEecccccCCCC-CCCC----hhhhhcceeeeccCChHHHHHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSK-SRLH----LAEFYMIEAELAFLDNIHDLCNTIEQFIKSVLN 564 (661)
Q Consensus 513 rVyeIg~~FRaE~s~-t~RH----l~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~~ 564 (661)
++-+||+|||+|.+. ++++ .-|||++|.+. |++ -++..+..+.++..+..
T Consensus 141 ~iaq~g~~fR~E~~~~~~~~gl~RvReF~q~E~~~-F~~-pe~~~~~~~~~~~~~~~ 195 (290)
T d1g5ha2 141 GLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVW-FTP-TRTSSQWLDFWLRHRLL 195 (290)
T ss_dssp EEEEEEEEEEEEC---------CEEEEEEEEEEEE-EEC-HHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccccccCCcccccceeeEeEeeeeEE-EeC-CcchHHHHHHHHHHHHH
Confidence 578999999966432 1222 35999999988 666 67777777776665543
No 38
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]}
Probab=56.18 E-value=5.9 Score=37.46 Aligned_cols=48 Identities=29% Similarity=0.420 Sum_probs=31.5
Q ss_pred eeEEEecccccCCCCCC--CChhhhhcc-eeeeccCChHHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSKSR--LHLAEFYMI-EAELAFLDNIHDLCNTIEQFIKS 561 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~--RHl~EFtmL-E~e~a~~d~~~dlm~~~E~Li~~ 561 (661)
|+|+++++||+|..... -=.-||+++ +.+....+ -++..+..+.++..
T Consensus 124 r~~e~~~~fR~E~~~~~GllR~reF~~~dd~~~~~~~-~~~~~~~~~~~~~~ 174 (268)
T d1nj8a3 124 KIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHST-KEEAENQVKEAISI 174 (268)
T ss_dssp CEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESS-HHHHHHHHHHHHHH
T ss_pred EEeeccccccccccccccceeEEEEeeechhceeccc-cchhhHHHHHHHHH
Confidence 78999999999954221 013589755 45666666 66666666665543
No 39
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]}
Probab=53.74 E-value=7.6 Score=36.17 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=35.5
Q ss_pred eeEEEecccccCCCCCCC-ChhhhhcceeeeccCChHHHHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSKSRL-HLAEFYMIEAELAFLDNIHDLCNTIEQFIKSVL 563 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~R-Hl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i~ 563 (661)
++|+++++||+|.+...+ =.-+|+|.+.+....+ .++.....++++....
T Consensus 129 r~~~~~~~fR~E~~~~g~~r~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (272)
T d1hc7a2 129 LLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHAT-REEAEEEVRRMLSIYA 179 (272)
T ss_dssp EEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESS-HHHHHHHHHHHHHHHH
T ss_pred eeeecccccccccccccccceEEEEEEhhhhhhcc-cccchhHHHHHHHHHH
Confidence 679999999999864310 1257899999987776 6777766666554443
No 40
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]}
Probab=53.39 E-value=6.6 Score=36.85 Aligned_cols=47 Identities=21% Similarity=0.367 Sum_probs=29.0
Q ss_pred eeEEEecccccCCCCCC--CChhhhhcc-eeeeccCChHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSKSR--LHLAEFYMI-EAELAFLDNIHDLCNTIEQFIK 560 (661)
Q Consensus 513 rVyeIg~~FRaE~s~t~--RHl~EFtmL-E~e~a~~d~~~dlm~~~E~Li~ 560 (661)
|+|+++++||+|...++ .=.-||+++ +.+....+ -++.....+.++.
T Consensus 121 r~~q~~~~fR~E~~~~~Gl~R~reF~~~~d~~~~~~~-~~~~~~e~~~~~~ 170 (265)
T d1nj1a3 121 RFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHAT-ASEAEEQVERAVE 170 (265)
T ss_dssp EEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESS-HHHHHHHHHHHHH
T ss_pred EEEeeccceeeecccCcCCEEEEEEEEeccceeecCC-HHHHHHHhhhhHH
Confidence 78999999999953221 024599755 55555565 5555555544443
No 41
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]}
Probab=47.74 E-value=8 Score=37.11 Aligned_cols=37 Identities=19% Similarity=0.379 Sum_probs=30.3
Q ss_pred ceeEEEecccccCCCCCCCChhhhhcceeeeccCChHH
Q psy4384 512 SKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNIH 549 (661)
Q Consensus 512 ~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~~ 549 (661)
-|.|++|++||.|..... ..-||+++.+|.-..++..
T Consensus 100 ~r~~y~g~v~r~~~~~~g-r~re~~Q~g~EiiG~~~~~ 136 (322)
T d1kmma2 100 QRLWYIGPMFRHERPQKG-RYRQFHQLGCEVFGLQGPD 136 (322)
T ss_dssp EEEEEEEEEECCCCCBTT-BCSEEEEEEEEEESCCSHH
T ss_pred hhHhhcccccccCCCCCC-ccchhhhhhHHHhccccch
Confidence 478999999999997765 4479999999998876433
No 42
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=45.60 E-value=12 Score=36.24 Aligned_cols=50 Identities=12% Similarity=0.271 Sum_probs=35.1
Q ss_pred eeEEEecccccCCCC------CCCChhhhhcceeeeccCChHHHHHHHHHHHHHHH
Q psy4384 513 KVYTLNPTFRAENSK------SRLHLAEFYMIEAELAFLDNIHDLCNTIEQFIKSV 562 (661)
Q Consensus 513 rVyeIg~~FRaE~s~------t~RHl~EFtmLE~e~a~~d~~~dlm~~~E~Li~~i 562 (661)
|++++++|||.|... +-....||+.+|....-..+.++..+..++++...
T Consensus 137 r~~~~s~cfR~Eag~~g~~trGL~RvhQF~kvE~~~~~~~~~e~s~~~~~~~~~~~ 192 (311)
T d1seta2 137 RYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENA 192 (311)
T ss_dssp EEEEEEEEECCCCSCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHH
T ss_pred eEEeecccchhhhccccccchhhhhhcccchhhhheeeccccccchhHHHHHHHHH
Confidence 578999999999632 22355799999987653333677777777776554
No 43
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]}
Probab=45.43 E-value=8.2 Score=37.16 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=27.6
Q ss_pred ceeEEEecccccCCCCCCCChhhhhcceeeeccCChH
Q psy4384 512 SKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNI 548 (661)
Q Consensus 512 ~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~ 548 (661)
-|.|++|++||.+..... ..-||+++.+|.-+.++.
T Consensus 101 ~r~~Y~g~VfR~~~~~~g-r~re~~Q~g~EiiG~~~~ 136 (324)
T d1h4vb2 101 VRLWMAGPMFRAERPQKG-RYRQFHQVNYEALGSENP 136 (324)
T ss_dssp EEEEEEEEEECCCCC-----CCEEEEEEEEEESCCCH
T ss_pred hhheeeCcccccCcccCC-CcceeccccccccCCCCh
Confidence 488999999999987644 558999999999876643
No 44
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.86 E-value=2 Score=33.63 Aligned_cols=18 Identities=28% Similarity=0.728 Sum_probs=16.1
Q ss_pred ceEecccccchhhHhhhc
Q psy4384 9 IELFCANCKCWFHESCIS 26 (661)
Q Consensus 9 ~~lqC~~C~~wfH~~C~~ 26 (661)
.-++|..|.+-||..|++
T Consensus 28 ~l~pCRvCtRv~H~~CL~ 45 (89)
T d1wila_ 28 SLFPCRVCTRVFHDGCLR 45 (89)
T ss_dssp CCSSCSSSSSCCCHHHHH
T ss_pred ceecceeecchhhHHHHH
Confidence 346999999999999998
No 45
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]}
Probab=43.35 E-value=5.7 Score=37.67 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=26.3
Q ss_pred ceeEEEecccccCCCCCCCChhhhhcceeeeccCChH
Q psy4384 512 SKVYTLNPTFRAENSKSRLHLAEFYMIEAELAFLDNI 548 (661)
Q Consensus 512 ~rVyeIg~~FRaE~s~t~RHl~EFtmLE~e~a~~d~~ 548 (661)
-|.|++|+|||.++. ..-||+++.+|.-+.++.
T Consensus 71 ~k~~Y~g~VfR~~~~----~~re~~Q~G~EiiG~~~~ 103 (275)
T d1usya_ 71 IKVWYADFVYRYSGS----DLVAEYQLGLEKVPRNSL 103 (275)
T ss_dssp EEEECCEEEEEEETT----EEEEEEEEEEEEESCCSH
T ss_pred eeeeEEeeEEEeCCC----cccceeecCceeechhhH
Confidence 389999999998764 356999999998775543
No 46
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.95 E-value=4.4 Score=24.70 Aligned_cols=14 Identities=43% Similarity=1.158 Sum_probs=10.4
Q ss_pred EEEcccCCCCCccceeec
Q psy4384 40 VFICKNCSNTGLESFKKN 57 (661)
Q Consensus 40 ~F~C~~C~~~g~e~~~r~ 57 (661)
+|+|++|. |.|+|.
T Consensus 4 vftcs~cq----e~f~rr 17 (30)
T d2dlqa3 4 VFTCSVCQ----ETFRRR 17 (30)
T ss_dssp CEECSSSC----CEESSH
T ss_pred eEEeHHHH----HHHHHH
Confidence 69999997 456553
No 47
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=22.20 E-value=9.3 Score=27.30 Aligned_cols=19 Identities=26% Similarity=0.265 Sum_probs=15.4
Q ss_pred ceEecccccchhhHhhhcc
Q psy4384 9 IELFCANCKCWFHESCISY 27 (661)
Q Consensus 9 ~~lqC~~C~~wfH~~C~~~ 27 (661)
....|..|..+||..||..
T Consensus 22 ~~c~c~~c~h~~H~~Cl~~ 40 (60)
T d1vyxa_ 22 RACGCTGELENVHRSCLST 40 (60)
T ss_dssp CSCCCSSGGGSCCHHHHHH
T ss_pred EecccCCCCCEEcHHHHHH
Confidence 3346788999999999983
Done!