Query psy4385
Match_columns 473
No_of_seqs 518 out of 4917
Neff 9.4
Searched_HMMs 29240
Date Sat Aug 17 00:11:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 1.4E-67 4.9E-72 539.6 42.9 408 15-424 16-423 (457)
2 1q1c_A FK506-binding protein 4 100.0 4.7E-45 1.6E-49 344.3 28.8 245 15-259 36-280 (280)
3 2if4_A ATFKBP42; FKBP-like, al 100.0 2.1E-41 7.3E-46 332.3 23.0 280 28-420 47-332 (338)
4 1p5q_A FKBP52, FK506-binding p 100.0 7.7E-40 2.6E-44 321.0 31.7 298 145-445 23-320 (336)
5 3jxv_A 70 kDa peptidyl-prolyl 100.0 2.9E-41 1E-45 331.4 12.9 223 27-254 8-237 (356)
6 3jxv_A 70 kDa peptidyl-prolyl 100.0 1.4E-36 4.9E-41 298.1 25.8 220 25-253 122-355 (356)
7 1p5q_A FKBP52, FK506-binding p 100.0 3.1E-29 1.1E-33 245.6 19.4 272 20-379 15-292 (336)
8 1r9h_A FKB-6, FK506 binding pr 100.0 8.4E-29 2.9E-33 207.9 13.5 133 19-151 3-135 (135)
9 3o5e_A Peptidyl-prolyl CIS-tra 100.0 7.8E-28 2.7E-32 204.1 14.7 122 17-138 22-143 (144)
10 3o5q_A Peptidyl-prolyl CIS-tra 99.9 1.2E-27 4.3E-32 199.1 14.0 123 16-138 5-127 (128)
11 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 1.1E-26 3.6E-31 237.1 17.4 271 140-415 24-379 (457)
12 3kz7_A FK506-binding protein 3 99.9 2E-25 6.7E-30 183.8 14.5 109 28-136 2-118 (119)
13 2if4_A ATFKBP42; FKBP-like, al 99.9 4.2E-25 1.4E-29 216.3 19.3 218 146-414 48-291 (338)
14 1yat_A FK506 binding protein; 99.9 3.4E-25 1.1E-29 180.5 14.5 110 27-136 3-112 (113)
15 2ppn_A FK506-binding protein 1 99.9 4.5E-25 1.5E-29 178.1 13.1 106 31-136 1-106 (107)
16 2vn1_A 70 kDa peptidylprolyl i 99.9 1.2E-24 4.1E-29 181.5 15.4 115 24-138 10-127 (129)
17 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.2E-24 4E-29 181.7 14.6 109 27-136 25-133 (133)
18 3b7x_A FK506-binding protein 6 99.9 2.3E-25 7.9E-30 186.6 10.2 115 20-137 18-133 (134)
19 2lgo_A FKBP; infectious diseas 99.9 1E-24 3.5E-29 181.4 13.3 109 28-136 20-130 (130)
20 3oe2_A Peptidyl-prolyl CIS-tra 99.9 4.1E-24 1.4E-28 191.3 14.6 104 28-137 115-218 (219)
21 2lkn_A AH receptor-interacting 99.9 7.2E-25 2.5E-29 187.4 9.1 114 26-139 6-159 (165)
22 1jvw_A Macrophage infectivity 99.9 2E-24 6.8E-29 186.6 11.9 110 27-138 34-143 (167)
23 4dip_A Peptidyl-prolyl CIS-tra 99.9 9.5E-24 3.2E-28 175.1 14.3 110 27-138 9-123 (125)
24 3uf8_A Ubiquitin-like protein 99.9 7.9E-24 2.7E-28 190.3 14.3 110 26-136 100-209 (209)
25 2awg_A 38 kDa FK-506 binding p 99.9 1.5E-23 5.2E-28 171.9 14.7 112 20-137 5-117 (118)
26 2jwx_A FKBP38NTD, FK506-bindin 99.9 1.3E-23 4.5E-28 179.3 14.4 109 27-139 40-150 (157)
27 1fd9_A Protein (macrophage inf 99.9 1E-23 3.5E-28 189.1 13.6 109 27-138 103-211 (213)
28 2f4e_A ATFKBP42; FKBP-like, al 99.9 1.8E-23 6.2E-28 183.6 14.3 111 28-139 47-161 (180)
29 1u79_A FKBP-type peptidyl-prol 99.9 9.6E-24 3.3E-28 175.8 9.8 109 27-136 9-128 (129)
30 1q6h_A FKBP-type peptidyl-prol 99.9 5.1E-23 1.7E-27 185.8 14.6 105 28-136 119-223 (224)
31 2d9f_A FK506-binding protein 8 99.9 4.3E-23 1.5E-27 173.0 12.2 116 18-139 7-124 (135)
32 3rkv_A Putative peptidylprolyl 99.9 1.5E-22 5.1E-27 176.0 13.1 154 262-415 4-161 (162)
33 2pbc_A FK506-binding protein 2 99.9 3.7E-22 1.3E-26 159.3 11.9 95 44-138 4-98 (102)
34 4gco_A Protein STI-1; structur 99.8 1.7E-20 5.9E-25 156.1 13.8 116 266-396 10-125 (126)
35 2fbn_A 70 kDa peptidylprolyl i 99.8 9.2E-20 3.2E-24 163.8 18.8 181 241-421 10-191 (198)
36 1q1c_A FK506-binding protein 4 99.8 5E-20 1.7E-24 173.4 12.3 115 21-141 159-277 (280)
37 2hr2_A Hypothetical protein; a 99.8 6.2E-20 2.1E-24 156.4 9.5 137 264-403 6-153 (159)
38 1ihg_A Cyclophilin 40; ppiase 99.8 2.2E-18 7.6E-23 170.4 17.1 155 261-415 215-370 (370)
39 3kz7_A FK506-binding protein 3 99.7 2.1E-17 7E-22 135.7 12.0 104 145-251 2-118 (119)
40 4gcn_A Protein STI-1; structur 99.7 1.6E-17 5.5E-22 138.2 11.2 114 265-394 4-124 (127)
41 3o5e_A Peptidyl-prolyl CIS-tra 99.7 2.9E-17 9.9E-22 139.0 12.5 111 138-252 26-142 (144)
42 3upv_A Heat shock protein STI1 99.7 3.4E-17 1.2E-21 135.4 11.9 117 268-399 3-125 (126)
43 3gyz_A Chaperone protein IPGC; 99.7 7.1E-17 2.4E-21 138.4 12.1 115 257-386 24-138 (151)
44 3o5q_A Peptidyl-prolyl CIS-tra 99.7 2.1E-16 7.3E-21 131.1 13.3 110 139-252 11-126 (128)
45 2f4e_A ATFKBP42; FKBP-like, al 99.7 1.3E-16 4.5E-21 139.8 12.2 120 146-269 48-179 (180)
46 4ga2_A E3 SUMO-protein ligase 99.7 6.3E-17 2.1E-21 138.7 8.2 112 268-394 30-142 (150)
47 3sz7_A HSC70 cochaperone (SGT) 99.7 2.6E-16 8.8E-21 136.6 12.2 112 266-392 8-119 (164)
48 4ga2_A E3 SUMO-protein ligase 99.7 2.3E-16 7.9E-21 135.2 11.0 127 274-415 2-128 (150)
49 1hxv_A Trigger factor; FKBP fo 99.7 1.1E-16 3.7E-21 129.0 8.1 84 45-136 29-112 (113)
50 1r9h_A FKB-6, FK506 binding pr 99.7 8.2E-16 2.8E-20 128.6 13.3 110 140-253 7-122 (135)
51 2jwx_A FKBP38NTD, FK506-bindin 99.7 4.1E-16 1.4E-20 132.9 11.2 106 145-253 41-149 (157)
52 4dt4_A FKBP-type 16 kDa peptid 99.7 4.5E-16 1.5E-20 133.7 10.9 85 45-137 24-108 (169)
53 2xcb_A PCRH, regulatory protei 99.7 8.3E-16 2.9E-20 130.2 12.6 121 265-400 14-134 (142)
54 2vgx_A Chaperone SYCD; alterna 99.6 5.3E-16 1.8E-20 132.6 10.7 118 265-397 17-134 (148)
55 2ppn_A FK506-binding protein 1 99.6 2.2E-15 7.4E-20 121.1 12.3 100 148-251 1-106 (107)
56 2lkn_A AH receptor-interacting 99.6 4E-16 1.4E-20 133.2 8.3 79 146-227 9-96 (165)
57 3urz_A Uncharacterized protein 99.6 1.1E-14 3.6E-19 131.8 16.9 119 268-401 3-137 (208)
58 1yat_A FK506 binding protein; 99.6 3.5E-15 1.2E-19 121.0 12.1 102 146-251 5-112 (113)
59 2vn1_A 70 kDa peptidylprolyl i 99.6 4.7E-15 1.6E-19 123.2 12.8 105 145-253 14-127 (129)
60 2awg_A 38 kDa FK-506 binding p 99.6 4.9E-15 1.7E-19 121.1 12.6 104 145-252 11-117 (118)
61 3q49_B STIP1 homology and U bo 99.6 1.8E-15 6E-20 126.5 10.1 119 268-401 8-131 (137)
62 4gyw_A UDP-N-acetylglucosamine 99.6 3.3E-15 1.1E-19 159.4 14.2 121 267-402 7-127 (723)
63 2d9f_A FK506-binding protein 8 99.6 2.3E-15 7.7E-20 125.9 9.9 111 145-258 15-128 (135)
64 3prb_A FKBP-type peptidyl-prol 99.6 2.6E-15 8.9E-20 135.3 10.7 70 46-116 2-84 (231)
65 2lgo_A FKBP; infectious diseas 99.6 1.1E-14 3.6E-19 120.8 13.3 98 150-251 27-130 (130)
66 3pr9_A FKBP-type peptidyl-prol 99.6 1.8E-15 6.1E-20 128.7 8.7 83 46-137 2-97 (157)
67 3b7x_A FK506-binding protein 6 99.6 4.6E-15 1.6E-19 123.8 10.1 103 145-252 24-133 (134)
68 1jvw_A Macrophage infectivity 99.6 1.6E-14 5.5E-19 124.5 13.7 112 146-265 36-153 (167)
69 4gyw_A UDP-N-acetylglucosamine 99.6 1.9E-15 6.3E-20 161.4 9.1 141 251-406 25-165 (723)
70 2kr7_A FKBP-type peptidyl-prol 99.6 9.7E-15 3.3E-19 124.0 11.6 83 45-136 6-89 (151)
71 2kfw_A FKBP-type peptidyl-prol 99.6 4.2E-15 1.4E-19 131.0 9.5 83 46-137 3-85 (196)
72 4dip_A Peptidyl-prolyl CIS-tra 99.6 1.5E-14 5.1E-19 119.5 12.2 104 145-253 10-123 (125)
73 2y78_A Peptidyl-prolyl CIS-tra 99.6 1.4E-14 4.8E-19 120.5 12.0 101 145-250 26-132 (133)
74 1ix5_A FKBP; ppiase, isomerase 99.6 9.1E-16 3.1E-20 130.4 4.2 84 46-137 2-98 (151)
75 2k8i_A SLYD, peptidyl-prolyl C 99.6 2.9E-14 1E-18 123.1 13.7 83 46-137 3-85 (171)
76 3oe2_A Peptidyl-prolyl CIS-tra 99.6 1.3E-14 4.4E-19 129.8 11.5 100 146-252 116-218 (219)
77 1elw_A TPR1-domain of HOP; HOP 99.6 3.4E-14 1.2E-18 114.5 12.8 114 268-396 3-116 (118)
78 2vyi_A SGTA protein; chaperone 99.6 5.9E-14 2E-18 115.2 13.9 124 262-400 5-128 (131)
79 1a17_A Serine/threonine protei 99.6 1.2E-13 4.1E-18 118.9 16.4 120 262-396 6-125 (166)
80 2pl2_A Hypothetical conserved 99.5 1.7E-14 5.8E-19 131.4 11.2 119 269-402 5-134 (217)
81 2h6f_A Protein farnesyltransfe 99.5 1.2E-14 4E-19 144.1 10.1 131 254-399 116-247 (382)
82 2pl2_A Hypothetical conserved 99.5 2.2E-14 7.5E-19 130.7 10.5 138 262-416 32-180 (217)
83 1hxi_A PEX5, peroxisome target 99.5 1.8E-14 6.1E-19 118.5 8.9 102 271-387 19-120 (121)
84 3uf8_A Ubiquitin-like protein 99.5 5.7E-14 2E-18 126.0 12.7 101 145-250 102-208 (209)
85 2lni_A Stress-induced-phosphop 99.5 3.9E-14 1.3E-18 117.1 9.7 118 267-399 14-131 (133)
86 2dba_A Smooth muscle cell asso 99.5 9.7E-14 3.3E-18 117.0 12.3 118 267-396 26-143 (148)
87 3vtx_A MAMA; tetratricopeptide 99.5 6.1E-14 2.1E-18 123.6 11.4 145 269-414 5-168 (184)
88 1zu2_A Mitochondrial import re 99.5 2.8E-14 9.6E-19 121.2 8.4 103 280-397 13-136 (158)
89 2h6f_A Protein farnesyltransfe 99.5 4.1E-14 1.4E-18 140.1 10.9 134 265-414 93-227 (382)
90 4i17_A Hypothetical protein; T 99.5 1.4E-13 4.8E-18 125.7 13.7 122 269-404 7-135 (228)
91 3gyz_A Chaperone protein IPGC; 99.5 3E-14 1E-18 122.0 8.1 105 312-417 30-134 (151)
92 3vtx_A MAMA; tetratricopeptide 99.5 2.9E-13 9.8E-18 119.2 14.5 132 275-415 4-135 (184)
93 1elr_A TPR2A-domain of HOP; HO 99.5 1.4E-13 4.8E-18 113.1 11.6 118 268-401 3-127 (131)
94 1u79_A FKBP-type peptidyl-prol 99.5 7.1E-14 2.4E-18 115.9 9.6 102 146-251 11-128 (129)
95 1fd9_A Protein (macrophage inf 99.5 1.5E-13 5.3E-18 123.0 12.4 101 146-253 105-211 (213)
96 3cgm_A SLYD, peptidyl-prolyl C 99.5 3E-14 1E-18 121.5 7.3 78 46-137 3-80 (158)
97 4i17_A Hypothetical protein; T 99.5 1.7E-13 5.9E-18 125.1 12.6 120 268-402 41-169 (228)
98 2xev_A YBGF; tetratricopeptide 99.5 1.6E-13 5.5E-18 113.1 11.1 115 271-397 4-121 (129)
99 4gco_A Protein STI-1; structur 99.5 2.6E-13 8.8E-18 112.4 12.2 103 312-415 7-109 (126)
100 1q6h_A FKBP-type peptidyl-prol 99.5 2.1E-13 7.2E-18 123.0 11.9 98 146-251 120-223 (224)
101 3k9i_A BH0479 protein; putativ 99.5 1.3E-13 4.3E-18 112.4 9.3 99 281-391 2-100 (117)
102 3urz_A Uncharacterized protein 99.5 2.5E-13 8.4E-18 122.8 10.9 90 275-379 60-151 (208)
103 2c2l_A CHIP, carboxy terminus 99.4 3.3E-13 1.1E-17 128.0 11.7 103 268-385 3-105 (281)
104 1wao_1 Serine/threonine protei 99.4 2.9E-13 1E-17 138.3 11.7 116 267-397 4-119 (477)
105 1na0_A Designed protein CTPR3; 99.4 1.8E-12 6.1E-17 105.3 14.2 115 269-398 9-123 (125)
106 2pbc_A FK506-binding protein 2 99.4 3.7E-13 1.3E-17 106.9 9.3 90 160-253 3-98 (102)
107 2e2e_A Formate-dependent nitri 99.4 6.8E-13 2.3E-17 116.1 11.6 115 265-394 40-157 (177)
108 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1.6E-12 5.6E-17 117.0 12.0 130 268-416 5-150 (213)
109 2vsy_A XCC0866; transferase, g 99.4 1.7E-12 5.9E-17 135.6 13.8 141 262-418 16-159 (568)
110 2vgx_A Chaperone SYCD; alterna 99.4 1.6E-12 5.4E-17 110.8 11.0 107 312-419 15-121 (148)
111 2pzi_A Probable serine/threoni 99.4 9.6E-14 3.3E-18 148.2 3.9 117 268-400 432-548 (681)
112 3uq3_A Heat shock protein STI1 99.4 3.4E-12 1.1E-16 117.8 13.5 146 269-415 79-235 (258)
113 3as5_A MAMA; tetratricopeptide 99.4 3.9E-12 1.3E-16 110.8 13.1 132 268-415 41-172 (186)
114 2kck_A TPR repeat; tetratricop 99.4 1.4E-12 4.7E-17 104.0 8.8 102 269-385 6-110 (112)
115 3qky_A Outer membrane assembly 99.4 4.1E-12 1.4E-16 118.6 13.3 141 269-421 52-229 (261)
116 4abn_A Tetratricopeptide repea 99.4 9.7E-13 3.3E-17 134.4 9.3 155 252-406 120-312 (474)
117 2fo7_A Synthetic consensus TPR 99.4 1.2E-11 4E-16 101.6 13.9 129 270-414 2-130 (136)
118 3uq3_A Heat shock protein STI1 99.3 1.7E-12 5.8E-17 119.8 8.6 116 265-395 135-256 (258)
119 1xnf_A Lipoprotein NLPI; TPR, 99.3 1.9E-11 6.5E-16 114.1 15.8 134 266-416 40-173 (275)
120 2q7f_A YRRB protein; TPR, prot 99.3 9.2E-12 3.2E-16 113.9 12.9 133 267-415 55-187 (243)
121 1w26_A Trigger factor, TF; cha 99.3 2.4E-12 8.3E-17 128.5 9.5 90 45-142 157-246 (432)
122 3qky_A Outer membrane assembly 99.3 4.7E-12 1.6E-16 118.2 10.9 139 268-419 14-180 (261)
123 4abn_A Tetratricopeptide repea 99.3 8.6E-12 3E-16 127.3 13.7 117 267-399 100-226 (474)
124 2pzi_A Probable serine/threoni 99.3 1.4E-12 4.9E-17 139.2 8.2 119 267-401 465-583 (681)
125 2xcb_A PCRH, regulatory protei 99.3 1E-11 3.4E-16 104.8 11.6 107 312-419 12-118 (142)
126 4gcn_A Protein STI-1; structur 99.3 1.1E-11 3.9E-16 102.5 11.2 100 315-415 5-111 (127)
127 2e2e_A Formate-dependent nitri 99.3 4.8E-12 1.6E-16 110.7 9.4 132 273-420 14-148 (177)
128 1w3b_A UDP-N-acetylglucosamine 99.3 8.8E-12 3E-16 123.2 11.8 119 266-399 166-284 (388)
129 3upv_A Heat shock protein STI1 99.3 3.1E-11 1.1E-15 99.2 12.9 99 316-415 2-100 (126)
130 2q7f_A YRRB protein; TPR, prot 99.3 6.8E-12 2.3E-16 114.9 9.7 134 267-416 89-222 (243)
131 1w3b_A UDP-N-acetylglucosamine 99.3 7.4E-12 2.5E-16 123.7 10.4 127 261-402 59-185 (388)
132 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.6E-11 5.6E-16 110.4 11.8 103 269-386 37-155 (213)
133 1fch_A Peroxisomal targeting s 99.3 3.6E-12 1.2E-16 124.5 7.9 122 268-404 216-348 (368)
134 3ieg_A DNAJ homolog subfamily 99.3 4E-11 1.4E-15 116.0 15.1 120 272-402 237-356 (359)
135 2ho1_A Type 4 fimbrial biogene 99.3 1.3E-11 4.4E-16 114.0 10.8 132 267-414 69-202 (252)
136 2ho1_A Type 4 fimbrial biogene 99.3 1.9E-11 6.5E-16 112.8 11.7 135 267-415 103-237 (252)
137 4eqf_A PEX5-related protein; a 99.3 3.5E-12 1.2E-16 124.9 7.0 119 270-403 178-298 (365)
138 4eqf_A PEX5-related protein; a 99.3 2.2E-11 7.5E-16 119.2 12.7 101 272-387 216-316 (365)
139 3as5_A MAMA; tetratricopeptide 99.3 3E-11 1E-15 105.2 12.2 133 268-416 7-139 (186)
140 2l6j_A TPR repeat-containing p 99.3 8.4E-13 2.9E-17 105.6 1.5 92 269-375 4-101 (111)
141 2yhc_A BAMD, UPF0169 lipoprote 99.3 6.9E-11 2.4E-15 107.9 14.5 110 269-390 4-134 (225)
142 1fch_A Peroxisomal targeting s 99.3 3.4E-11 1.2E-15 117.5 13.0 152 266-418 129-316 (368)
143 2vq2_A PILW, putative fimbrial 99.3 7.5E-11 2.6E-15 106.2 14.2 132 269-416 42-176 (225)
144 3u4t_A TPR repeat-containing p 99.3 1.9E-11 6.5E-16 114.1 10.5 118 268-397 36-154 (272)
145 3qou_A Protein YBBN; thioredox 99.2 3.4E-11 1.2E-15 114.4 12.3 122 268-404 116-273 (287)
146 2vq2_A PILW, putative fimbrial 99.2 1.9E-11 6.6E-16 110.1 10.0 79 317-395 112-191 (225)
147 2r5s_A Uncharacterized protein 99.2 1.6E-11 5.3E-16 107.6 9.0 148 252-416 23-173 (176)
148 1hxi_A PEX5, peroxisome target 99.2 1.2E-10 4.2E-15 95.3 13.8 94 320-414 19-112 (121)
149 2kat_A Uncharacterized protein 99.2 4.2E-11 1.4E-15 96.7 10.8 98 287-399 3-102 (115)
150 2hr2_A Hypothetical protein; a 99.2 6.2E-11 2.1E-15 100.8 11.6 99 317-416 10-131 (159)
151 1xnf_A Lipoprotein NLPI; TPR, 99.2 9.4E-11 3.2E-15 109.3 14.0 130 275-416 11-140 (275)
152 3hym_B Cell division cycle pro 99.2 1.4E-11 4.7E-16 118.1 8.4 124 268-397 192-315 (330)
153 3ieg_A DNAJ homolog subfamily 99.2 7E-11 2.4E-15 114.3 13.5 110 269-393 3-115 (359)
154 3sz7_A HSC70 cochaperone (SGT) 99.2 1.3E-10 4.4E-15 100.3 13.4 106 316-422 9-114 (164)
155 3cv0_A Peroxisome targeting si 99.2 2.1E-11 7.1E-16 116.6 9.0 123 268-405 171-305 (327)
156 2l6j_A TPR repeat-containing p 99.2 1.4E-10 4.9E-15 92.3 12.1 83 317-399 3-91 (111)
157 3hym_B Cell division cycle pro 99.2 3E-11 1E-15 115.7 9.4 136 265-416 86-222 (330)
158 1na3_A Designed protein CTPR2; 99.2 2E-10 6.8E-15 88.0 12.3 83 316-398 7-89 (91)
159 1qqe_A Vesicular transport pro 99.2 8.9E-11 3.1E-15 111.7 12.4 130 267-405 75-218 (292)
160 3u4t_A TPR repeat-containing p 99.2 8.9E-11 3E-15 109.5 12.1 118 269-401 74-191 (272)
161 3mkr_A Coatomer subunit epsilo 99.2 1E-10 3.4E-15 111.4 12.5 130 268-414 129-262 (291)
162 2gw1_A Mitochondrial precursor 99.2 1.2E-10 3.9E-15 119.0 13.5 108 265-388 2-109 (514)
163 2y4t_A DNAJ homolog subfamily 99.2 2.3E-10 7.9E-15 114.9 15.5 116 265-395 22-140 (450)
164 3edt_B KLC 2, kinesin light ch 99.2 1.6E-10 5.6E-15 107.7 13.2 142 266-415 40-197 (283)
165 1t11_A Trigger factor, TF; hel 99.2 1.5E-11 5.2E-16 121.1 6.1 98 45-151 160-257 (392)
166 2fo7_A Synthetic consensus TPR 99.2 5.1E-11 1.7E-15 97.7 8.1 103 268-385 34-136 (136)
167 2yhc_A BAMD, UPF0169 lipoprote 99.2 1.6E-10 5.4E-15 105.5 11.9 132 269-413 41-210 (225)
168 2y4t_A DNAJ homolog subfamily 99.2 3.6E-10 1.2E-14 113.5 15.6 119 272-401 260-378 (450)
169 1qqe_A Vesicular transport pro 99.2 2.4E-10 8.4E-15 108.7 13.1 112 268-388 116-235 (292)
170 3fp2_A TPR repeat-containing p 99.2 1E-10 3.5E-15 120.2 11.2 117 257-389 13-129 (537)
171 3ma5_A Tetratricopeptide repea 99.1 1.9E-10 6.4E-15 90.7 9.8 72 314-385 3-74 (100)
172 3q49_B STIP1 homology and U bo 99.1 3.8E-10 1.3E-14 93.6 11.6 103 314-417 5-107 (137)
173 3fp2_A TPR repeat-containing p 99.1 1.3E-10 4.3E-15 119.6 9.6 104 312-416 304-407 (537)
174 3cv0_A Peroxisome targeting si 99.1 1.7E-10 5.7E-15 110.3 9.7 127 276-418 144-271 (327)
175 2r5s_A Uncharacterized protein 99.1 2.5E-10 8.5E-15 99.8 9.8 129 271-416 8-137 (176)
176 2vsy_A XCC0866; transferase, g 99.1 2.9E-10 1E-14 118.6 12.1 119 282-416 2-120 (568)
177 3mkr_A Coatomer subunit epsilo 99.1 2E-10 6.7E-15 109.4 9.2 96 280-390 177-273 (291)
178 3edt_B KLC 2, kinesin light ch 99.1 5.1E-10 1.7E-14 104.3 11.1 109 266-381 82-198 (283)
179 4g1t_A Interferon-induced prot 99.1 8.6E-10 2.9E-14 111.6 13.6 127 268-400 50-186 (472)
180 3rkv_A Putative peptidylprolyl 99.1 6.6E-10 2.2E-14 95.6 10.5 99 317-416 10-126 (162)
181 2fbn_A 70 kDa peptidylprolyl i 99.1 7E-10 2.4E-14 98.8 10.8 125 276-416 11-151 (198)
182 3ulq_A Response regulator aspa 99.1 9.1E-10 3.1E-14 108.6 12.6 133 265-405 139-283 (383)
183 3u3w_A Transcriptional activat 99.0 9E-10 3.1E-14 104.7 11.8 139 269-416 115-266 (293)
184 3ro3_A PINS homolog, G-protein 99.0 2.6E-09 9E-14 90.3 13.3 139 266-414 6-156 (164)
185 2gw1_A Mitochondrial precursor 99.0 3.8E-10 1.3E-14 115.1 9.3 113 269-396 372-493 (514)
186 2kc7_A BFR218_protein; tetratr 99.0 1.2E-10 4.1E-15 91.1 4.2 68 322-389 4-72 (99)
187 1na3_A Designed protein CTPR2; 99.0 8.7E-10 3E-14 84.3 8.9 84 268-366 8-91 (91)
188 2xpi_A Anaphase-promoting comp 99.0 6.4E-10 2.2E-14 116.0 10.8 133 268-416 372-504 (597)
189 2kck_A TPR repeat; tetratricop 99.0 2.3E-10 7.9E-15 90.8 5.7 98 317-415 5-105 (112)
190 2qfc_A PLCR protein; TPR, HTH, 99.0 2.3E-09 8E-14 101.8 13.6 140 267-415 113-265 (293)
191 2kc7_A BFR218_protein; tetratr 99.0 1.8E-09 6.1E-14 84.3 10.6 67 312-386 28-95 (99)
192 3n71_A Histone lysine methyltr 99.0 2.5E-09 8.5E-14 108.8 14.1 143 263-413 303-461 (490)
193 2xev_A YBGF; tetratricopeptide 99.0 3.9E-09 1.3E-13 86.4 12.7 98 320-418 4-107 (129)
194 2lni_A Stress-induced-phosphop 99.0 2.1E-09 7.1E-14 88.1 11.0 100 315-415 13-112 (133)
195 2xpi_A Anaphase-promoting comp 99.0 8.3E-10 2.8E-14 115.2 10.6 165 249-414 387-577 (597)
196 1pc2_A Mitochondria fission pr 99.0 9E-10 3.1E-14 92.4 8.7 103 282-399 11-118 (152)
197 1hxv_A Trigger factor; FKBP fo 99.0 9.2E-10 3.1E-14 88.4 8.2 81 161-251 28-112 (113)
198 3ulq_A Response regulator aspa 99.0 4.1E-10 1.4E-14 111.2 7.5 110 265-383 180-295 (383)
199 3nf1_A KLC 1, kinesin light ch 99.0 2.8E-09 9.7E-14 100.8 13.1 109 266-381 108-224 (311)
200 1elw_A TPR1-domain of HOP; HOP 99.0 4.3E-09 1.5E-13 84.0 11.7 97 317-414 3-99 (118)
201 3nf1_A KLC 1, kinesin light ch 99.0 2.9E-09 1E-13 100.7 12.4 143 265-415 65-223 (311)
202 1a17_A Serine/threonine protei 99.0 5.3E-10 1.8E-14 95.7 6.5 100 267-381 45-146 (166)
203 2ond_A Cleavage stimulation fa 99.0 7.6E-10 2.6E-14 106.0 8.2 116 261-390 42-172 (308)
204 3q15_A PSP28, response regulat 99.0 2.4E-09 8.3E-14 105.5 11.9 145 265-418 137-292 (378)
205 2vyi_A SGTA protein; chaperone 99.0 1.1E-08 3.9E-13 83.1 13.9 104 312-416 6-109 (131)
206 1dce_A Protein (RAB geranylger 99.0 2.3E-09 7.7E-14 111.5 11.9 124 261-399 55-191 (567)
207 3u3w_A Transcriptional activat 99.0 1.4E-09 4.6E-14 103.4 9.4 108 267-382 153-267 (293)
208 3q15_A PSP28, response regulat 99.0 9.9E-10 3.4E-14 108.3 8.7 110 266-384 179-293 (378)
209 2ifu_A Gamma-SNAP; membrane fu 99.0 3.7E-09 1.3E-13 101.2 12.1 109 267-386 114-228 (307)
210 3pr9_A FKBP-type peptidyl-prol 99.0 2.1E-09 7.3E-14 91.2 9.0 66 163-231 2-85 (157)
211 2ifu_A Gamma-SNAP; membrane fu 98.9 1.1E-09 3.7E-14 105.0 7.9 137 267-414 74-222 (307)
212 3gw4_A Uncharacterized protein 98.9 4.7E-09 1.6E-13 93.0 10.9 140 268-417 25-177 (203)
213 2c2l_A CHIP, carboxy terminus 98.9 4.6E-09 1.6E-13 99.3 11.3 97 318-415 4-100 (281)
214 1wao_1 Serine/threonine protei 98.9 1.5E-10 5.2E-15 118.1 0.5 118 253-385 24-154 (477)
215 1ouv_A Conserved hypothetical 98.9 1.1E-08 3.8E-13 95.6 13.1 77 318-398 74-158 (273)
216 4a1s_A PINS, partner of inscut 98.9 4.7E-09 1.6E-13 104.0 11.0 125 266-401 45-181 (411)
217 2dba_A Smooth muscle cell asso 98.9 1.5E-08 5.2E-13 84.6 12.5 100 316-416 26-128 (148)
218 4dt4_A FKBP-type 16 kDa peptid 98.9 3.9E-09 1.3E-13 90.5 8.7 67 162-231 24-96 (169)
219 1na0_A Designed protein CTPR3; 98.9 2.1E-08 7.3E-13 80.6 12.7 98 318-416 9-106 (125)
220 2ond_A Cleavage stimulation fa 98.9 4.4E-09 1.5E-13 100.6 9.7 134 266-415 96-231 (308)
221 1elr_A TPR2A-domain of HOP; HO 98.9 1.1E-08 3.7E-13 83.3 10.5 99 317-416 3-108 (131)
222 3sf4_A G-protein-signaling mod 98.9 1.1E-08 3.9E-13 100.6 12.6 142 265-416 183-336 (406)
223 4f3v_A ESX-1 secretion system 98.9 1.3E-08 4.3E-13 95.2 11.6 104 271-389 137-244 (282)
224 3dra_A Protein farnesyltransfe 98.9 2.2E-09 7.6E-14 102.3 6.5 127 261-402 95-236 (306)
225 3rjv_A Putative SEL1 repeat pr 98.9 1.1E-08 3.8E-13 92.3 10.7 83 315-398 82-174 (212)
226 1ix5_A FKBP; ppiase, isomerase 98.8 3.7E-09 1.3E-13 89.5 6.5 66 163-231 2-86 (151)
227 4g1t_A Interferon-induced prot 98.8 3.5E-09 1.2E-13 107.1 7.5 107 266-387 244-369 (472)
228 1zu2_A Mitochondrial import re 98.8 9.5E-09 3.3E-13 87.1 8.8 72 329-400 13-94 (158)
229 2qfc_A PLCR protein; TPR, HTH, 98.8 8.4E-08 2.9E-12 90.9 16.5 132 266-406 72-216 (293)
230 4a1s_A PINS, partner of inscut 98.8 4.6E-09 1.6E-13 104.1 7.8 140 267-416 221-372 (411)
231 3prb_A FKBP-type peptidyl-prol 98.8 9.6E-09 3.3E-13 92.5 9.0 66 163-231 2-85 (231)
232 3dra_A Protein farnesyltransfe 98.8 1.2E-08 3.9E-13 97.4 9.8 125 261-400 59-194 (306)
233 3k9i_A BH0479 protein; putativ 98.8 3.2E-09 1.1E-13 86.0 5.1 77 265-356 23-99 (117)
234 3ro3_A PINS homolog, G-protein 98.8 1.3E-08 4.5E-13 85.9 9.1 109 267-384 47-161 (164)
235 2kr7_A FKBP-type peptidyl-prol 98.8 1.4E-08 4.9E-13 85.9 9.1 68 161-231 5-78 (151)
236 3ro2_A PINS homolog, G-protein 98.8 1.3E-08 4.6E-13 96.8 10.1 122 269-401 5-138 (338)
237 3ro2_A PINS homolog, G-protein 98.8 2.2E-08 7.6E-13 95.2 11.2 140 266-415 180-331 (338)
238 3rjv_A Putative SEL1 repeat pr 98.8 1.5E-08 5E-13 91.5 9.4 112 267-398 16-137 (212)
239 1dce_A Protein (RAB geranylger 98.8 5.1E-09 1.7E-13 108.9 7.1 132 253-399 91-239 (567)
240 1ouv_A Conserved hypothetical 98.8 4.5E-08 1.5E-12 91.4 12.9 126 269-398 38-194 (273)
241 3cgm_A SLYD, peptidyl-prolyl C 98.8 1.9E-08 6.6E-13 85.5 9.3 78 163-252 3-80 (158)
242 3sf4_A G-protein-signaling mod 98.8 1.8E-08 6.2E-13 99.1 10.4 130 267-405 125-286 (406)
243 3dss_A Geranylgeranyl transfer 98.8 1.4E-07 4.8E-12 90.6 15.7 120 265-399 60-192 (331)
244 1ihg_A Cyclophilin 40; ppiase 98.8 3.2E-08 1.1E-12 97.4 11.6 99 317-416 222-336 (370)
245 3qww_A SET and MYND domain-con 98.8 5.4E-08 1.8E-12 97.4 12.9 118 268-392 297-427 (433)
246 2v5f_A Prolyl 4-hydroxylase su 98.8 3.9E-08 1.3E-12 77.9 9.5 80 318-397 5-91 (104)
247 3dss_A Geranylgeranyl transfer 98.7 3.5E-08 1.2E-12 94.7 10.5 120 262-396 101-237 (331)
248 3q7a_A Farnesyltransferase alp 98.7 1.3E-07 4.4E-12 91.2 14.1 125 276-415 61-195 (349)
249 2kfw_A FKBP-type peptidyl-prol 98.7 5E-08 1.7E-12 85.8 10.1 66 163-231 3-73 (196)
250 2k8i_A SLYD, peptidyl-prolyl C 98.7 4.1E-08 1.4E-12 84.6 8.8 66 163-231 3-73 (171)
251 3qwp_A SET and MYND domain-con 98.7 5.7E-08 1.9E-12 97.3 11.1 117 269-392 287-416 (429)
252 3bee_A Putative YFRE protein; 98.7 9E-08 3.1E-12 74.0 9.7 71 316-386 4-77 (93)
253 2v5f_A Prolyl 4-hydroxylase su 98.6 1.3E-07 4.4E-12 74.9 9.5 83 269-359 5-87 (104)
254 3qou_A Protein YBBN; thioredox 98.6 2.3E-08 7.9E-13 94.7 6.1 129 252-380 134-283 (287)
255 3q7a_A Farnesyltransferase alp 98.6 3.6E-08 1.2E-12 95.1 7.0 124 262-400 81-215 (349)
256 3gw4_A Uncharacterized protein 98.6 5.7E-08 2E-12 85.9 7.5 111 265-383 62-178 (203)
257 4f3v_A ESX-1 secretion system 98.6 1.3E-07 4.3E-12 88.5 10.1 132 271-419 104-240 (282)
258 3ma5_A Tetratricopeptide repea 98.6 4.9E-08 1.7E-12 76.5 5.2 69 267-350 5-73 (100)
259 1nzn_A CGI-135 protein, fissio 98.6 2.6E-07 8.9E-12 74.6 9.4 102 283-399 15-121 (126)
260 2kat_A Uncharacterized protein 98.6 3E-07 1E-11 73.7 9.7 81 335-416 2-82 (115)
261 1klx_A Cysteine rich protein B 98.5 7.6E-07 2.6E-11 74.3 11.2 98 275-393 31-136 (138)
262 1hz4_A MALT regulatory protein 98.5 6.2E-07 2.1E-11 87.6 12.3 129 268-405 52-193 (373)
263 2ooe_A Cleavage stimulation fa 98.5 3.3E-07 1.1E-11 94.5 10.3 109 264-387 267-391 (530)
264 2xm6_A Protein corresponding t 98.5 8.5E-07 2.9E-11 90.4 12.5 97 317-418 362-469 (490)
265 2ooe_A Cleavage stimulation fa 98.4 3.7E-06 1.3E-10 86.5 15.7 114 286-415 255-384 (530)
266 3n71_A Histone lysine methyltr 98.4 3.4E-07 1.2E-11 93.1 6.0 111 263-380 345-463 (490)
267 1hz4_A MALT regulatory protein 98.3 2.1E-06 7.1E-11 83.8 10.5 137 267-414 12-162 (373)
268 1w26_A Trigger factor, TF; cha 98.3 2.9E-06 9.8E-11 84.6 10.8 84 161-253 156-242 (432)
269 2xm6_A Protein corresponding t 98.2 1E-05 3.5E-10 82.3 13.8 109 268-397 38-158 (490)
270 3o48_A Mitochondria fission 1 98.2 9.1E-06 3.1E-10 65.7 10.3 84 317-400 39-126 (134)
271 1xi4_A Clathrin heavy chain; a 98.2 7.4E-06 2.5E-10 90.7 12.6 110 271-403 1197-1331(1630)
272 3e4b_A ALGK; tetratricopeptide 98.2 4.9E-06 1.7E-10 84.0 10.2 122 270-398 177-330 (452)
273 1y8m_A FIS1; mitochondria, unk 98.2 2.3E-05 7.8E-10 64.2 12.0 83 317-399 38-124 (144)
274 1b89_A Protein (clathrin heavy 98.1 5.1E-06 1.7E-10 82.2 9.1 106 271-401 124-256 (449)
275 3e4b_A ALGK; tetratricopeptide 98.1 5.8E-06 2E-10 83.4 9.5 109 266-397 245-365 (452)
276 3u64_A Protein TP_0956; tetrat 98.1 1.1E-05 3.7E-10 74.7 9.9 89 282-385 176-273 (301)
277 1pc2_A Mitochondria fission pr 98.1 1.4E-05 4.8E-10 66.9 9.5 78 268-360 31-113 (152)
278 1klx_A Cysteine rich protein B 98.1 1.3E-05 4.4E-10 66.6 9.3 94 282-398 8-105 (138)
279 3ly7_A Transcriptional activat 98.0 4.4E-05 1.5E-09 73.6 13.1 114 272-386 199-344 (372)
280 3gty_X Trigger factor, TF; cha 98.0 7.6E-06 2.6E-10 81.5 7.7 87 45-152 154-240 (433)
281 4b4t_Q 26S proteasome regulato 98.0 2.7E-05 9.4E-10 77.3 10.8 119 266-384 52-207 (434)
282 1xi4_A Clathrin heavy chain; a 97.9 3.4E-05 1.2E-09 85.5 10.3 107 273-384 1053-1166(1630)
283 1t11_A Trigger factor, TF; hel 97.9 4.9E-06 1.7E-10 81.7 3.1 84 161-253 159-245 (392)
284 4b4t_Q 26S proteasome regulato 97.8 2.4E-05 8.2E-10 77.7 7.0 100 272-380 138-237 (434)
285 3mv2_B Coatomer subunit epsilo 97.8 0.00013 4.6E-09 68.9 11.1 128 271-401 102-270 (310)
286 3mv2_B Coatomer subunit epsilo 97.8 0.00011 3.7E-09 69.5 10.0 93 288-395 85-183 (310)
287 3ffl_A Anaphase-promoting comp 97.7 0.00015 5.2E-09 61.0 9.0 118 272-396 23-165 (167)
288 3bee_A Putative YFRE protein; 97.7 5.4E-05 1.8E-09 58.2 5.8 68 269-351 6-76 (93)
289 3u64_A Protein TP_0956; tetrat 97.6 7.4E-05 2.5E-09 69.2 6.7 116 284-399 102-252 (301)
290 3qwp_A SET and MYND domain-con 97.6 5.1E-05 1.7E-09 75.8 5.6 95 263-364 323-425 (429)
291 1b89_A Protein (clathrin heavy 97.6 4.7E-05 1.6E-09 75.3 4.5 122 249-405 75-196 (449)
292 3qww_A SET and MYND domain-con 97.5 9.8E-05 3.4E-09 73.7 5.6 84 263-353 334-422 (433)
293 1nzn_A CGI-135 protein, fissio 97.2 0.0015 5.1E-08 52.6 8.8 77 270-359 36-115 (126)
294 2ff4_A Probable regulatory pro 97.2 0.0062 2.1E-07 59.8 14.7 112 269-380 115-233 (388)
295 3o48_A Mitochondria fission 1 96.7 0.0054 1.8E-07 49.5 7.8 44 316-359 76-119 (134)
296 4e6h_A MRNA 3'-END-processing 96.5 0.0024 8.3E-08 67.3 6.1 98 319-417 435-534 (679)
297 4e6h_A MRNA 3'-END-processing 96.5 0.019 6.4E-07 60.6 12.7 82 285-381 325-407 (679)
298 4h7y_A Dual specificity protei 96.5 0.026 8.8E-07 46.5 10.6 114 266-388 17-130 (161)
299 1y8m_A FIS1; mitochondria, unk 96.5 0.012 4E-07 48.2 8.5 43 316-358 75-117 (144)
300 3ly7_A Transcriptional activat 96.4 0.015 5.3E-07 55.9 10.0 104 309-415 224-338 (372)
301 4gns_B Protein CSD3, chitin bi 95.9 0.054 1.8E-06 57.3 12.1 64 315-378 334-397 (754)
302 3ffl_A Anaphase-promoting comp 95.3 0.049 1.7E-06 45.8 7.3 85 321-405 23-141 (167)
303 3kae_A CDC27, possible protein 95.1 0.16 5.4E-06 42.6 9.6 94 275-388 39-150 (242)
304 1ya0_A SMG-7 transcript varian 94.8 0.17 5.9E-06 50.9 11.4 83 317-399 151-233 (497)
305 2uy1_A Cleavage stimulation fa 94.4 0.35 1.2E-05 48.8 12.7 124 269-394 213-362 (493)
306 2uy1_A Cleavage stimulation fa 94.4 0.31 1E-05 49.2 12.2 116 285-417 195-350 (493)
307 1zbp_A Hypothetical protein VP 94.1 0.27 9.3E-06 44.7 9.8 68 327-394 6-73 (273)
308 3txn_A 26S proteasome regulato 93.9 0.45 1.6E-05 46.2 11.6 98 274-380 104-209 (394)
309 3gty_X Trigger factor, TF; cha 92.6 0.16 5.5E-06 50.2 6.3 71 162-253 154-227 (433)
310 3mv2_A Coatomer subunit alpha; 91.8 0.8 2.7E-05 42.7 9.5 118 269-386 114-241 (325)
311 3mkr_B Coatomer subunit alpha; 91.6 6 0.00021 36.8 15.2 114 271-384 104-230 (320)
312 4b4t_R RPN7, 26S proteasome re 90.7 0.35 1.2E-05 47.8 6.5 101 270-382 132-238 (429)
313 1zbp_A Hypothetical protein VP 90.1 1.3 4.4E-05 40.3 9.0 62 278-354 6-67 (273)
314 2ff4_A Probable regulatory pro 88.7 7.3 0.00025 37.6 14.0 85 321-405 118-224 (388)
315 4gns_B Protein CSD3, chitin bi 88.0 0.57 1.9E-05 49.5 5.8 59 271-344 339-397 (754)
316 3txn_A 26S proteasome regulato 87.2 3.8 0.00013 39.7 10.7 127 269-395 19-185 (394)
317 4b4t_P 26S proteasome regulato 87.1 5.4 0.00018 39.4 12.1 105 268-381 136-247 (445)
318 4b4t_S RPN3, 26S proteasome re 86.9 1.6 5.6E-05 43.7 8.1 69 318-386 231-304 (523)
319 1ya0_A SMG-7 transcript varian 86.3 1.5 5E-05 44.1 7.5 80 270-364 153-232 (497)
320 2v6y_A AAA family ATPase, P60 85.2 0.85 2.9E-05 33.5 3.9 35 265-299 7-41 (83)
321 4g26_A Pentatricopeptide repea 84.5 19 0.00064 36.1 14.9 118 280-413 81-201 (501)
322 4g26_A Pentatricopeptide repea 83.8 10 0.00035 38.0 12.6 100 271-384 107-209 (501)
323 4fhn_B Nucleoporin NUP120; pro 83.0 5.1 0.00017 44.8 10.8 105 273-377 846-963 (1139)
324 3mkq_B Coatomer subunit alpha; 82.2 4.6 0.00016 34.2 7.7 84 267-378 32-115 (177)
325 2cpt_A SKD1 protein, vacuolar 80.6 3.8 0.00013 32.2 6.2 41 260-300 8-49 (117)
326 3t5v_B Nuclear mRNA export pro 79.9 7.6 0.00026 38.4 9.5 105 281-385 138-254 (455)
327 3mkq_B Coatomer subunit alpha; 79.2 4.6 0.00016 34.2 6.7 52 320-379 10-61 (177)
328 3mkq_A Coatomer beta'-subunit; 78.3 4.6 0.00016 42.7 8.2 57 318-374 681-745 (814)
329 2w2u_A Hypothetical P60 katani 78.0 1.7 5.8E-05 31.9 3.2 37 263-299 13-49 (83)
330 2v6x_A Vacuolar protein sortin 77.1 2.1 7.3E-05 31.4 3.6 39 261-299 5-43 (85)
331 3mkq_A Coatomer beta'-subunit; 76.7 3.8 0.00013 43.4 6.9 81 270-378 682-762 (814)
332 4h7y_A Dual specificity protei 75.5 7.6 0.00026 31.9 6.6 103 313-417 8-124 (161)
333 2dl1_A Spartin; SPG20, MIT, st 73.0 9.2 0.00031 29.7 6.2 71 266-336 19-96 (116)
334 1wfd_A Hypothetical protein 15 72.8 6.2 0.00021 29.5 5.2 37 264-300 10-46 (93)
335 2dl1_A Spartin; SPG20, MIT, st 71.6 7.3 0.00025 30.3 5.4 70 333-410 18-91 (116)
336 3ax2_A Mitochondrial import re 70.5 12 0.00041 26.5 5.9 37 357-393 22-58 (73)
337 2crb_A Nuclear receptor bindin 70.1 4.1 0.00014 30.1 3.5 35 266-300 12-46 (97)
338 2crb_A Nuclear receptor bindin 67.8 34 0.0012 25.2 9.7 23 355-377 18-40 (97)
339 1qsa_A Protein (soluble lytic 67.2 25 0.00084 36.3 10.0 54 327-380 294-347 (618)
340 4a5x_A MITD1, MIT domain-conta 66.6 9.4 0.00032 28.0 4.9 34 267-300 14-47 (86)
341 4b4t_R RPN7, 26S proteasome re 66.6 11 0.00036 37.0 6.9 62 320-381 133-197 (429)
342 1wy6_A Hypothetical protein ST 66.4 32 0.0011 27.8 8.2 91 271-381 61-154 (172)
343 4b4t_P 26S proteasome regulato 63.5 73 0.0025 31.1 12.4 63 317-379 136-204 (445)
344 3kae_A CDC27, possible protein 61.1 73 0.0025 26.7 11.4 55 320-379 35-89 (242)
345 2cpt_A SKD1 protein, vacuolar 57.7 43 0.0015 26.0 7.6 22 369-390 42-63 (117)
346 3spa_A Mtrpol, DNA-directed RN 56.5 1.2E+02 0.004 33.4 12.9 100 318-418 127-232 (1134)
347 3re2_A Predicted protein; meni 56.4 73 0.0025 30.1 9.8 78 319-396 256-346 (472)
348 3spa_A Mtrpol, DNA-directed RN 55.2 56 0.0019 35.8 10.3 100 271-381 129-230 (1134)
349 3t5x_A PCI domain-containing p 53.9 18 0.00061 31.3 5.3 55 315-369 11-70 (203)
350 1om2_A Protein (mitochondrial 51.8 18 0.00062 27.0 4.2 36 357-392 25-60 (95)
351 4a5x_A MITD1, MIT domain-conta 51.2 68 0.0023 23.3 8.6 19 362-380 26-44 (86)
352 2cfu_A SDSA1; SDS-hydrolase, l 51.1 34 0.0012 35.5 7.8 51 353-403 450-500 (658)
353 4gq4_A Menin; tumor suppressor 50.8 1.2E+02 0.0042 29.1 10.6 63 337-399 283-356 (489)
354 2v6y_A AAA family ATPase, P60 49.6 25 0.00087 25.4 4.7 18 369-386 35-52 (83)
355 2npm_A 14-3-3 domain containin 49.6 39 0.0013 30.4 6.9 53 286-346 173-226 (260)
356 3u84_A Menin; MLL, JUND, ledgf 49.2 1E+02 0.0035 29.7 9.8 60 337-396 298-368 (550)
357 4gq2_M Nucleoporin NUP120; bet 48.7 78 0.0027 34.4 10.5 75 273-347 844-926 (950)
358 2vkj_A TM1634; membrane protei 48.0 60 0.0021 23.7 6.2 33 267-299 51-83 (106)
359 2ijq_A Hypothetical protein; s 48.0 86 0.0029 25.9 8.2 69 272-347 35-104 (161)
360 2w2u_A Hypothetical P60 katani 47.1 27 0.00093 25.3 4.5 16 370-385 44-59 (83)
361 2o8p_A 14-3-3 domain containin 46.0 38 0.0013 29.7 6.0 60 280-346 136-196 (227)
362 2br9_A 14-3-3E, 14-3-3 protein 45.5 31 0.0011 30.5 5.5 54 286-346 147-201 (234)
363 2wpv_A GET4, UPF0363 protein Y 44.1 1.8E+02 0.0062 26.8 10.8 27 350-376 132-158 (312)
364 3t5x_A PCI domain-containing p 43.9 60 0.002 27.9 7.1 18 454-471 180-197 (203)
365 3eab_A Spastin; spastin, MIT, 42.8 55 0.0019 24.0 5.5 65 267-331 14-85 (89)
366 2cfu_A SDSA1; SDS-hydrolase, l 42.7 33 0.0011 35.6 6.1 50 319-368 450-499 (658)
367 4gq2_M Nucleoporin NUP120; bet 42.1 33 0.0011 37.3 6.3 52 324-379 816-867 (950)
368 3uzd_A 14-3-3 protein gamma; s 41.9 39 0.0013 30.2 5.5 53 286-345 148-201 (248)
369 3ax2_A Mitochondrial import re 41.2 25 0.00084 24.8 3.3 39 263-301 11-49 (73)
370 3ubw_A 14-3-3E, 14-3-3 protein 41.0 41 0.0014 30.2 5.5 53 286-345 173-226 (261)
371 1o9d_A 14-3-3-like protein C; 40.9 40 0.0014 30.3 5.5 53 286-345 152-205 (260)
372 2wb7_A PT26-6P; extra chromoso 40.6 85 0.0029 30.9 8.1 93 262-382 422-517 (526)
373 2cwy_A Hypothetical protein TT 39.6 66 0.0023 23.8 5.8 62 274-346 6-67 (94)
374 4fhn_B Nucleoporin NUP120; pro 38.9 42 0.0014 37.4 6.6 53 323-379 817-869 (1139)
375 3lpz_A GET4 (YOR164C homolog); 37.3 2.6E+02 0.0089 26.1 13.4 108 266-376 32-160 (336)
376 1om2_A Protein (mitochondrial 36.0 39 0.0013 25.2 3.9 39 262-300 13-51 (95)
377 2rpa_A Katanin P60 ATPase-cont 35.6 37 0.0013 24.3 3.6 26 321-346 15-40 (78)
378 3eab_A Spastin; spastin, MIT, 35.4 66 0.0023 23.6 4.9 66 333-403 12-78 (89)
379 3iqu_A 14-3-3 protein sigma; s 35.3 47 0.0016 29.4 5.0 54 285-345 149-203 (236)
380 2vkj_A TM1634; membrane protei 34.7 1.3E+02 0.0045 21.9 7.0 29 354-382 55-83 (106)
381 2ijq_A Hypothetical protein; s 34.2 1.9E+02 0.0063 23.8 8.2 58 323-380 37-103 (161)
382 4b4t_S RPN3, 26S proteasome re 33.0 35 0.0012 34.1 4.2 68 274-351 236-303 (523)
383 2ymb_A MITD1, MIT domain-conta 31.5 10 0.00034 34.2 0.0 39 263-301 17-55 (257)
384 3efz_A 14-3-3 protein; 14-3-3, 30.9 43 0.0015 30.2 4.0 57 286-347 169-226 (268)
385 3myv_A SUSD superfamily protei 28.5 61 0.0021 31.7 5.2 55 285-346 164-218 (454)
386 3fm3_A Methionine aminopeptida 27.1 1.1E+02 0.0037 28.9 6.4 53 42-101 117-175 (358)
387 3mcx_A SUSD superfamily protei 26.8 74 0.0025 31.3 5.5 56 285-347 176-231 (477)
388 3qnk_A Putative lipoprotein; a 26.5 3.9E+02 0.013 26.4 10.8 90 287-380 82-210 (517)
389 2g0u_A Type III secretion syst 26.1 2E+02 0.0067 21.2 7.0 39 366-404 30-68 (92)
390 3kez_A Putative sugar binding 26.0 69 0.0024 31.4 5.1 55 285-346 170-224 (461)
391 2yin_A DOCK2, dedicator of cyt 25.8 1.3E+02 0.0044 29.3 6.9 96 270-365 36-139 (436)
392 3esl_A Checkpoint serine/threo 24.6 3.3E+02 0.011 23.3 8.3 87 290-383 58-146 (202)
393 2p4v_A Transcription elongatio 24.4 1.1E+02 0.0039 24.9 5.3 24 84-107 119-142 (158)
394 3htx_A HEN1; HEN1, small RNA m 23.2 97 0.0033 33.2 5.6 63 45-107 560-650 (950)
395 3lew_A SUSD-like carbohydrate 22.9 96 0.0033 30.7 5.4 58 285-346 174-231 (495)
396 1qsa_A Protein (soluble lytic 22.8 2.3E+02 0.0079 29.0 8.3 117 276-404 221-337 (618)
397 2ca5_A MXIH; transport protein 22.6 2.2E+02 0.0075 20.5 6.2 30 368-397 26-55 (85)
398 3tb5_A Methionine aminopeptida 21.4 2.4E+02 0.0083 24.8 7.5 56 40-102 79-143 (264)
399 3myv_A SUSD superfamily protei 20.9 1.6E+02 0.0054 28.7 6.5 47 334-380 164-218 (454)
400 2yhe_A SEC-alkyl sulfatase; hy 26.0 21 0.00072 37.1 0.0 52 320-371 463-514 (668)
401 3bu8_A Telomeric repeat-bindin 20.4 1.2E+02 0.0042 26.3 4.7 38 360-397 122-159 (235)
402 2f23_A Anti-cleavage anti-GREA 20.3 87 0.003 25.6 3.8 23 85-107 121-143 (156)
403 3snx_A SUSD homolog, putative 20.2 1.3E+02 0.0045 29.4 5.7 31 316-346 189-219 (460)
No 1
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=1.4e-67 Score=539.55 Aligned_cols=408 Identities=43% Similarity=0.779 Sum_probs=344.9
Q ss_pred hhhcccCccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhc
Q psy4385 15 RIRMVESKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIA 94 (473)
Q Consensus 15 ~~~~~~~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~ 94 (473)
.+.+.+|+|+++++++||.|+|+++|+|...|..||.|+|||++++.||++|++|+..+.|+.|.+|.+.+++||+++|.
T Consensus 16 ~~~~~~~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~ 95 (457)
T 1kt0_A 16 ATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVA 95 (457)
T ss_dssp -----------------CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHT
T ss_pred cccCCCcccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHh
Confidence 34556789999999999999999999998569999999999999999999999998888899999999999999999999
Q ss_pred cCCCCcEEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeeeeccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEE
Q psy4385 95 TMKKDEVAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWEAEDISPTHDGGIRREILEEGASFSTPKDGANVEITLK 174 (473)
Q Consensus 95 ~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~ 174 (473)
+|++||+++|+|||+++||..|.++.|||+++++|+|+|++|...+++ .|++++++++++|.|+.+|..|++|+|||+
T Consensus 96 ~m~~Ge~~~~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~~~~--~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~ 173 (457)
T 1kt0_A 96 TMKRGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGEDLF--EDGGIIRRTKRKGEGYSNPNEGATVEIHLE 173 (457)
T ss_dssp TCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECEETT--SSSSEEEEEEECCBCSCCCCTTCEEEEEEE
T ss_pred hCCCCCEEEEEEChHHhccccCCCCCCCCCCcEEEEEeeceeeccccc--CCcceEEEEEecCCCCCCCCCCCEEEEEEE
Confidence 999999999999999999999999999999999999999999887776 788999999999999999999999999999
Q ss_pred eeeCCeEEEeceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeecccccc
Q psy4385 175 GECEGKVFQEGTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEKI 254 (473)
Q Consensus 175 g~~~g~~~~~~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~ 254 (473)
|+++|++|+++++.|.+|+|....++++|+.|+..|++||++.+.++|.++|+..|.....+|+++.+.|.+.+.+++++
T Consensus 174 g~~~g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A 253 (457)
T 1kt0_A 174 GRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKA 253 (457)
T ss_dssp EEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECC
T ss_pred EEeCCeEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccC
Confidence 99999999999999999999777799999999999999999999999999999999887789999999999999999999
Q ss_pred ccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCCh
Q psy4385 255 KDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQA 334 (473)
Q Consensus 255 ~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~ 334 (473)
+..|.+.....+..+..++++|+.+++.|+|.+|+..|++|+.+.+.....+++...++.+....+|+|+|.||+++++|
T Consensus 254 ~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~ 333 (457)
T 1kt0_A 254 KESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREY 333 (457)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred cchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999999999999999999999999999888766677777888999999999999999999999
Q ss_pred hHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 335 KPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 335 ~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
++|+.+|++||+++|+++++||++|.+|..+|+|++|+.+|++|++++|++..++..++.++..+++..+++++.|++||
T Consensus 334 ~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 334 TKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCchH
Q psy4385 415 DKFAKHDTEK 424 (473)
Q Consensus 415 ~~~~~~~~~~ 424 (473)
.++...+.+.
T Consensus 414 ~k~~~~d~~~ 423 (457)
T 1kt0_A 414 KKFAEQDAKE 423 (457)
T ss_dssp ----------
T ss_pred hhhhhccccc
Confidence 9988876653
No 2
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=4.7e-45 Score=344.31 Aligned_cols=245 Identities=46% Similarity=0.821 Sum_probs=224.7
Q ss_pred hhhcccCccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhc
Q psy4385 15 RIRMVESKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIA 94 (473)
Q Consensus 15 ~~~~~~~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~ 94 (473)
.+..++++|+++..++||+|+++++|+|...|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+.+++||+++|.
T Consensus 36 ~~~~~~~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~ 115 (280)
T 1q1c_A 36 APLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIA 115 (280)
T ss_dssp -----CCEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHT
T ss_pred cccCccccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHh
Confidence 44566789999889999999999999998569999999999999999999999998777899999999999999999999
Q ss_pred cCCCCcEEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeeeeccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEE
Q psy4385 95 TMKKDEVAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWEAEDISPTHDGGIRREILEEGASFSTPKDGANVEITLK 174 (473)
Q Consensus 95 ~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~ 174 (473)
+|++|++++|+|||++|||..|.++.|||+++++|+|+|++|...++.+..|+++.++++++|.|...|..|+.|+|||.
T Consensus 116 gm~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~ 195 (280)
T 1q1c_A 116 TMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALE 195 (280)
T ss_dssp TCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECEECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEE
T ss_pred cCCCCCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeecccccccccccceeEEeeecccccccccCCceEEEEEE
Confidence 99999999999999999999999999999999999999999998888877899999999999999889999999999999
Q ss_pred eeeCCeEEEeceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeecccccc
Q psy4385 175 GECEGKVFQEGTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEKI 254 (473)
Q Consensus 175 g~~~g~~~~~~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~ 254 (473)
|+++|++|+++++.|.+|.+....+++||+.+|..|+.||++.+.+||.++||..+.+...||+++.+.|++.|.++.+.
T Consensus 196 g~~dG~~fd~~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~ 275 (280)
T 1q1c_A 196 GYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKA 275 (280)
T ss_dssp EEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECC
T ss_pred EEeCCEEEecCCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCC
Confidence 99999999999999999998644469999999999999999999999999999988776789999999999999999988
Q ss_pred ccccc
Q psy4385 255 KDTWQ 259 (473)
Q Consensus 255 ~~~~~ 259 (473)
++.|+
T Consensus 276 ~~~W~ 280 (280)
T 1q1c_A 276 KESWE 280 (280)
T ss_dssp CC---
T ss_pred CCCCC
Confidence 87774
No 3
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=2.1e-41 Score=332.29 Aligned_cols=280 Identities=30% Similarity=0.476 Sum_probs=209.4
Q ss_pred CCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecC-CCEEeccCCCCccEEEEeCCC-ccchhHHHHhccCCCCcEEEEE
Q psy4385 28 DDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLD-GTVFDSSKTRGEPFEFDLGKG-QVIKAWDRGIATMKKDEVAVFT 105 (473)
Q Consensus 28 ~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~d-g~~~~st~~~~~p~~~~~g~~-~~~~g~~~~l~~m~~Ge~~~v~ 105 (473)
.++||.|+|+++|+|. .|..||.|+|||++++.+ |++|++|+..+.|+.|.+|.+ .+|+||+++|.+|++||+++|+
T Consensus 47 ~~~~~~~~~~~~g~g~-~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~ 125 (338)
T 2if4_A 47 LDEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (338)
T ss_dssp EETTEEEEEEECCBSC-CCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred CCCCeEEEEEeCCCCC-CCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence 4679999999999997 799999999999999984 999999987778999999999 8999999999999999999999
Q ss_pred ecCCCCcCCCCC--CCCCCCCCceEEEEEEEeeeeccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEeeeCCeEEE
Q psy4385 106 CKPEYAYGKQGS--PPTIPPDSTLVFEVEMISWEAEDISPTHDGGIRREILEEGASFSTPKDGANVEITLKGECEGKVFQ 183 (473)
Q Consensus 106 i~~~~ayg~~g~--~~~ip~~~~l~~~v~l~~~~~~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~~g~~~~ 183 (473)
|||+++||..|. ++.||++++++|+|+|+++....
T Consensus 126 i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~------------------------------------------- 162 (338)
T 2if4_A 126 VGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETK------------------------------------------- 162 (338)
T ss_dssp ECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCC-------------------------------------------
T ss_pred ECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCc-------------------------------------------
Confidence 999999999997 47899999999999999875210
Q ss_pred eceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeeccccccccccccCch
Q psy4385 184 EGTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEKIKDTWQLNSD 263 (473)
Q Consensus 184 ~~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~~~~~~~~~~ 263 (473)
.....|.++..
T Consensus 163 ---------------------------------------------------------------------e~~~~~~~~~~ 173 (338)
T 2if4_A 163 ---------------------------------------------------------------------EGKARSDMTVE 173 (338)
T ss_dssp ---------------------------------------------------------------------CCBTTTBCCHH
T ss_pred ---------------------------------------------------------------------cccccccCCHH
Confidence 01234666778
Q ss_pred hHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCC--CChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy4385 264 EKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGG--FEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQC 341 (473)
Q Consensus 264 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~--~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~ 341 (473)
+++..+..++.+|+.+++.|+|.+|+..|++|+.+.+.... ...............+|+|+|.||+++++|++|+.+|
T Consensus 174 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~ 253 (338)
T 2if4_A 174 ERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHC 253 (338)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 88999999999999999999999999999999977653210 1111122233444569999999999999999999999
Q ss_pred HHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q psy4385 342 DKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDKFAKH 420 (473)
Q Consensus 342 ~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~~~~ 420 (473)
+++|+++|+++++||++|.+|..+|+|++|+.+|+++++++|++..++..|..+........+.+++.|++||......
T Consensus 254 ~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 254 NIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEG 332 (338)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------------------------------
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998888888888889999999765543
No 4
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=7.7e-40 Score=321.02 Aligned_cols=298 Identities=40% Similarity=0.710 Sum_probs=265.4
Q ss_pred CCCCceEEEEecCCCcCCCCCCCeEEEEEEeeeCCeEEEeceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCC
Q psy4385 145 HDGGIRREILEEGASFSTPKDGANVEITLKGECEGKVFQEGTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQH 224 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~~g~~~~~~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~ 224 (473)
.|++++++|+++|.|..+|..|++|+|||.|+++|++||+++++|.+|.|....++++|+.|+..|++||++.+.++|.+
T Consensus 23 ~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~~g~~fd~~~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ 102 (336)
T 1p5q_A 23 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSY 102 (336)
T ss_dssp CTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECTTT
T ss_pred CCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEECCEEEecCCeEEEeCCCCccccchHHHHHHhcCCCCCeEEEEECCcc
Confidence 78999999999999988999999999999999999999999999999999766689999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCceeeeeeccccccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCC
Q psy4385 225 LWSGKGNDKLGVPSNKPATYTITMNNFEKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGG 304 (473)
Q Consensus 225 ~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~ 304 (473)
+|+..|.....+|+++.+.|++.|.+|+++...|.+.....+..+..+..+|+.+++.|+|.+|+..|++|+.+.+....
T Consensus 103 ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~ 182 (336)
T 1p5q_A 103 AFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESS 182 (336)
T ss_dssp TTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCC
T ss_pred ccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcccc
Confidence 99999987767999999999999999999999999999999999999999999999999999999999999999888766
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q psy4385 305 FEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN 384 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~ 384 (473)
...+....+.+....+++|+|.|++++++|++|+.+|++|++++|+++++|+++|.+|..+|+|++|+.+|++|++++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 262 (336)
T 1p5q_A 183 FSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPN 262 (336)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 66777788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHhccCchhhhhcCccchh
Q psy4385 385 NKAAVQKLTQTKQKLREQKIKEKQVYANMFDKFAKHDTEKEEEEKKKEPDVMKTLGEWGAE 445 (473)
Q Consensus 385 ~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (473)
+..++..++.+...+++..+++++.|++||.++...+.+..... ...++. ....|.++
T Consensus 263 ~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~w~~~ 320 (336)
T 1p5q_A 263 NKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAKAEA--SSGDHP-TDTEMKEE 320 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc--cCCCcc-cccccccc
Confidence 99999999999999999999999999999998866443322211 123333 46667666
No 5
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=2.9e-41 Score=331.38 Aligned_cols=223 Identities=43% Similarity=0.749 Sum_probs=103.3
Q ss_pred cCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEe
Q psy4385 27 TDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTC 106 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i 106 (473)
.+++||+|+++++|+|...|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 8 ~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~~i 87 (356)
T 3jxv_A 8 IGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTI 87 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCCEEEEEE
Confidence 36789999999999996689999999999999999999999999888899999999999999999999999999999999
Q ss_pred cCCCCcCCCCCCCCCCCCCceEEEEEEEeeee-ccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEe
Q psy4385 107 KPEYAYGKQGSPPTIPPDSTLVFEVEMISWEA-EDISPTHDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQE 184 (473)
Q Consensus 107 ~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~-~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~ 184 (473)
||++|||+.|.++.|||+++|+|+|+|++|.. .++. .|+++.++++++|.|+.+|..++.|+|||.|++ +|++|++
T Consensus 88 p~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~--~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~ 165 (356)
T 3jxv_A 88 PPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIA--KDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSK 165 (356)
T ss_dssp ------------------------------CCEEETT--SSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEE
T ss_pred ChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccc--cCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEec
Confidence 99999999999999999999999999999975 4554 789999999999999999999999999999999 9999987
Q ss_pred c-eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCC----CCCCCCceeeeeecccccc
Q psy4385 185 G-TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLG----VPSNKPATYTITMNNFEKI 254 (473)
Q Consensus 185 ~-~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~----ip~~~~~~y~i~L~~~~~~ 254 (473)
. ++.|.+|++. +++||+.||.+|++||++.+.++|+++||..|.+... ||+++.+.|+++|.+|...
T Consensus 166 ~~~~~f~~g~~~---v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v 237 (356)
T 3jxv_A 166 SEGVEFTVKDGH---LCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTV 237 (356)
T ss_dssp EEEEEEEGGGCS---SSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECE
T ss_pred cCCEEEEeCCCC---cchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecc
Confidence 5 7899999998 9999999999999999999999999999999887643 9999999999999998763
No 6
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=1.4e-36 Score=298.06 Aligned_cols=220 Identities=31% Similarity=0.599 Sum_probs=202.6
Q ss_pred eecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEE
Q psy4385 25 DLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVF 104 (473)
Q Consensus 25 ~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v 104 (473)
++..|+++.++++++|.|..+|..||.|+|||++++.||++|+++ .++.|.+|.+.+++||+.+|.+|++||+++|
T Consensus 122 di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~----~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~ 197 (356)
T 3jxv_A 122 DIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKS----EGVEFTVKDGHLCPALAKAVKTMKKGEKVLL 197 (356)
T ss_dssp ETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEE----EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEE
T ss_pred ccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEecc----CCEEEEeCCCCcchHHHHHHhhCCCCCEEEE
Confidence 345789999999999999889999999999999999999999998 3799999999999999999999999999999
Q ss_pred EecCCCCcCCCCCCC-----CCCCCCceEEEEEEEeeee-ccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-
Q psy4385 105 TCKPEYAYGKQGSPP-----TIPPDSTLVFEVEMISWEA-EDISPTHDGGIRREILEEGASFSTPKDGANVEITLKGEC- 177 (473)
Q Consensus 105 ~i~~~~ayg~~g~~~-----~ip~~~~l~~~v~l~~~~~-~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~- 177 (473)
+|||+++||+.|+++ .|||+++|+|+|+|++|.. .+++ .|.++.++++++|.|+.+|..++.|++||.|++
T Consensus 198 ~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~--~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~ 275 (356)
T 3jxv_A 198 AVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIG--DDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQ 275 (356)
T ss_dssp EECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEES--TTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEES
T ss_pred EEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccc--cccceeEEeeecccccCCCCCCCEEEEEEEEEEC
Confidence 999999999999875 5999999999999999976 4455 788999999999999999999999999999999
Q ss_pred CCeEEEec------eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCC-CCCCCCCCCceeeeeecc
Q psy4385 178 EGKVFQEG------TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGND-KLGVPSNKPATYTITMNN 250 (473)
Q Consensus 178 ~g~~~~~~------~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~-~~~ip~~~~~~y~i~L~~ 250 (473)
+|++|++. |+.|.+|.+. +++||+.+|..|+.||++.+.|+|.++||..+.. ...||+++.+.|++.|.+
T Consensus 276 dG~~fd~~~~~~~~p~~f~~G~g~---~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~ 352 (356)
T 3jxv_A 276 DGTVFLKKGHDEQEPFEFKTDEEA---VIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVS 352 (356)
T ss_dssp SSCEEEEESCTTSCCCEEETTTTS---SCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEE
T ss_pred CCCEEeeccccCCcCEEEEECCCc---cchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEE
Confidence 99999864 6899999987 9999999999999999999999999999988752 345899999999999998
Q ss_pred ccc
Q psy4385 251 FEK 253 (473)
Q Consensus 251 ~~~ 253 (473)
+.+
T Consensus 353 ~~~ 355 (356)
T 3jxv_A 353 FVK 355 (356)
T ss_dssp EEC
T ss_pred EEc
Confidence 864
No 7
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.96 E-value=3.1e-29 Score=245.58 Aligned_cols=272 Identities=22% Similarity=0.331 Sum_probs=196.5
Q ss_pred cCccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCc---cchhHHHHhccC
Q psy4385 20 ESKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQ---VIKAWDRGIATM 96 (473)
Q Consensus 20 ~~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~---~~~g~~~~l~~m 96 (473)
...+++++.++||.|+|+++|+|...|..|+.|+|||++++ +|++||++ |+.|.+|.|. ++++|+.||.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~ 88 (336)
T 1p5q_A 15 VPRGSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRM 88 (336)
T ss_dssp -------CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTC
T ss_pred cccceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcC
Confidence 35678889999999999999999877999999999999999 99999997 8999999886 589999999999
Q ss_pred CCCcEEEEEecCCCCcCCCCCCC-CCCCCCceEEEEEEEeeeeccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEe
Q psy4385 97 KKDEVAVFTCKPEYAYGKQGSPP-TIPPDSTLVFEVEMISWEAEDISPTHDGGIRREILEEGASFSTPKDGANVEITLKG 175 (473)
Q Consensus 97 ~~Ge~~~v~i~~~~ayg~~g~~~-~ip~~~~l~~~v~l~~~~~~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g 175 (473)
++||++.|.|+|+++||..|.+. .||+++++.|++.|.++...... ..+.+.. .|...
T Consensus 89 ~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~-------~~~a~~~-----~p~~a--------- 147 (336)
T 1p5q_A 89 EKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKES-------WEMNSEE-----KLEQS--------- 147 (336)
T ss_dssp CTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCG-------GGCCHHH-----HHHHH---------
T ss_pred CCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccch-------hcCCHHH-----HHHHH---------
Confidence 99999999999999999999876 69999999999999998742111 0000000 00000
Q ss_pred eeCCeEEEe-ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeecccccc
Q psy4385 176 ECEGKVFQE-GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEKI 254 (473)
Q Consensus 176 ~~~g~~~~~-~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~ 254 (473)
..+.. ...-+..|+- ..-+.-++.|+... |.. ... ..
T Consensus 148 ----~~~~~~g~~~~~~g~~--~~A~~~y~~Al~~~-----------p~~---------------~~~---------~~- 185 (336)
T 1p5q_A 148 ----TIVKERGTVYFKEGKY--KQALLQYKKIVSWL-----------EYE---------------SSF---------SN- 185 (336)
T ss_dssp ----HHHHHHHHHHHHHTCH--HHHHHHHHHHHHHT-----------TTC---------------CCC---------CS-
T ss_pred ----HHHHHHHHHHHHCCCH--HHHHHHHHHHHHHh-----------hcc---------------ccC---------Ch-
Confidence 00000 0000001110 00111222222221 000 000 00
Q ss_pred ccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCCh
Q psy4385 255 KDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQA 334 (473)
Q Consensus 255 ~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~ 334 (473)
..........+..+.++|.++++.|+|.+|+..|++++ .++|.+..+++++|.+|+.+++|
T Consensus 186 ----~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~a~~~lg~~~~~~g~~ 246 (336)
T 1p5q_A 186 ----EEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKAL---------------ELDSNNEKGLSRRGEAHLAVNDF 246 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCcHHHHHHHHHHHHHCCCH
Confidence 00112233446889999999999999999999999999 66667789999999999999999
Q ss_pred hHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHH-HHHHHHH
Q psy4385 335 KPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAE-KDFQKVL 379 (473)
Q Consensus 335 ~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~-~~~~~al 379 (473)
++|+.+|+++++++|++..+++.++.++..++++++|. ..|++++
T Consensus 247 ~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 247 ELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999984 4555555
No 8
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.96 E-value=8.4e-29 Score=207.87 Aligned_cols=133 Identities=57% Similarity=0.973 Sum_probs=113.0
Q ss_pred ccCccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCC
Q psy4385 19 VESKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKK 98 (473)
Q Consensus 19 ~~~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~ 98 (473)
.+|+|+++.+++|++|+++++|+|...|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+.+++||+++|.+|++
T Consensus 3 ~~~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~ 82 (135)
T 1r9h_A 3 GEKIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTK 82 (135)
T ss_dssp --CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCB
T ss_pred ccceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCC
Confidence 35788888899999999999999975799999999999999999999999976668999999999999999999999999
Q ss_pred CcEEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeeeeccCCCCCCCCceE
Q psy4385 99 DEVAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWEAEDISPTHDGGIRR 151 (473)
Q Consensus 99 Ge~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~~~~~~~~d~~i~k 151 (473)
|++++|.|||++|||..|.++.|||+++++|+|+|++|...++++.+|++++|
T Consensus 83 Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~~l~~~~d~~v~k 135 (135)
T 1r9h_A 83 GEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAEDISPDRDGTILR 135 (135)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-------------
T ss_pred CCEEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecCCcCcCCCCcccC
Confidence 99999999999999999999999999999999999999988898889988875
No 9
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.95 E-value=7.8e-28 Score=204.14 Aligned_cols=122 Identities=53% Similarity=0.903 Sum_probs=116.2
Q ss_pred hcccCccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccC
Q psy4385 17 RMVESKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATM 96 (473)
Q Consensus 17 ~~~~~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m 96 (473)
...+++|+++..|+||+|+++++|+|...|..||.|+|||++++.||++|++|+.++.|+.|.+|.+.+++||+++|.+|
T Consensus 22 ~~~~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm 101 (144)
T 3o5e_A 22 VAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATM 101 (144)
T ss_dssp HHHHCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTC
T ss_pred cccccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCC
Confidence 34578999999999999999999999867999999999999999999999999888889999999999999999999999
Q ss_pred CCCcEEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeeee
Q psy4385 97 KKDEVAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWEA 138 (473)
Q Consensus 97 ~~Ge~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~ 138 (473)
++||+++|+|||++|||..|.++.|||+++|+|+|+|++|..
T Consensus 102 ~~Ge~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 102 KKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp CBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCEEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence 999999999999999999999999999999999999999863
No 10
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.95 E-value=1.2e-27 Score=199.08 Aligned_cols=123 Identities=53% Similarity=0.894 Sum_probs=116.5
Q ss_pred hhcccCccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhcc
Q psy4385 16 IRMVESKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIAT 95 (473)
Q Consensus 16 ~~~~~~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~ 95 (473)
..+.++.|++...|+|++|+++++|+|...|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+++++||+++|.+
T Consensus 5 ~~~~~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~g 84 (128)
T 3o5q_A 5 TVTEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT 84 (128)
T ss_dssp HHHHHCEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTT
T ss_pred ccccccceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhc
Confidence 34568999999999999999999999976799999999999999999999999987778999999999999999999999
Q ss_pred CCCCcEEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeeee
Q psy4385 96 MKKDEVAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWEA 138 (473)
Q Consensus 96 m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~ 138 (473)
|++|++++|.|||++|||..|.++.|||+++|+|+|+|++|..
T Consensus 85 m~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 85 MKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCEEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 9999999999999999999999999999999999999999863
No 11
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.94 E-value=1.1e-26 Score=237.07 Aligned_cols=271 Identities=19% Similarity=0.228 Sum_probs=186.0
Q ss_pred cCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEe-----ceeeEEeCCCcccCCcHHHHHHHHhcccC
Q psy4385 140 DISPTHDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQE-----GTFSFVLGEGSEYDIPENLEKALEKFKYK 213 (473)
Q Consensus 140 ~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~-----~~~~~~lg~~~~~~~~~gle~al~~m~~g 213 (473)
++++..++++.++++++|.|..+|..|+.|+|||+|++ +|++|++ .|++|.+|.+. +++||+.+|.+|++|
T Consensus 24 ~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~---~i~g~~~~l~~m~~G 100 (457)
T 1kt0_A 24 DITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQ---VIKAWDIGVATMKRG 100 (457)
T ss_dssp ---------CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTT---SCHHHHHHHTTCCTT
T ss_pred cccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcc---hhhHHHHHHhhCCCC
Confidence 44555788999999999999878999999999999998 9999997 38899999987 999999999999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeeccccccccc---------------cccCchh---HHHhh------
Q psy4385 214 EKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEKIKDT---------------WQLNSDE---KLEQG------ 269 (473)
Q Consensus 214 E~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~~~~---------------~~~~~~~---~~~~a------ 269 (473)
|++.|.|||.++||..|.+. .||+++.+.|++.|.++....-. +..+..- .....
T Consensus 101 e~~~~~i~~~~~yg~~g~~~-~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~~g~ 179 (457)
T 1kt0_A 101 EICHLLCKPEYAYGSAGSLP-KIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGR 179 (457)
T ss_dssp CEEEEEECGGGTTTTTCBTT-TBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEETTE
T ss_pred CEEEEEEChHHhccccCCCC-CCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEeCCe
Confidence 99999999999999988654 69999999999999887642000 0000000 00000
Q ss_pred -------HHHHhhcchhhhcccHHHHHHHHHH----HhhhhcCC-----------------------------CCCChhH
Q psy4385 270 -------KLLKERGTTYFKQDKFELACRNYKK----AIPYLDFD-----------------------------GGFEGEQ 309 (473)
Q Consensus 270 -------~~~~~~G~~~~~~~~~~~A~~~y~~----al~~~~~~-----------------------------~~~~~~~ 309 (473)
......|....-...++.|+..+++ +|.+.+.. .......
T Consensus 180 ~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~ 259 (457)
T 1kt0_A 180 MFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEM 259 (457)
T ss_dssp EEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGS
T ss_pred EEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhc
Confidence 0000001111112245556655555 33221110 0000112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC---------------HHHHHHHHHHHHhcCCHHHHHHH
Q psy4385 310 ETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN---------------EKAFFRRGNAYLDLNEPELAEKD 374 (473)
Q Consensus 310 ~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~---------------~ka~~~~g~a~~~lg~~~~A~~~ 374 (473)
....++..+.++.++|.+++++++|+.|+..|++|++++|.+ ..+|+++|.||+.+++|++|+.+
T Consensus 260 ~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 339 (457)
T 1kt0_A 260 DTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVEC 339 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 235678889999999999999999999999999999999998 79999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 375 FQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 375 ~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
|.+|++++|++..++..++.++..+++..++. ..|.+++.
T Consensus 340 ~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~-~~~~~al~ 379 (457)
T 1kt0_A 340 CDKALGLDSANEKGLYRRGEAQLLMNEFESAK-GDFEKVLE 379 (457)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHT
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHccCHHHHH-HHHHHHHH
Confidence 99999999999999999999998887666543 34444443
No 12
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.93 E-value=2e-25 Score=183.79 Aligned_cols=109 Identities=42% Similarity=0.751 Sum_probs=102.4
Q ss_pred CCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCC-------CccEEEEeCCCccchhHHHHhccCCCCc
Q psy4385 28 DDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTR-------GEPFEFDLGKGQVIKAWDRGIATMKKDE 100 (473)
Q Consensus 28 ~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~-------~~p~~~~~g~~~~~~g~~~~l~~m~~Ge 100 (473)
.++|++|+|+++|+|...|+.||.|+|||++++.||++|++|+.. +.|+.|.+|.+.+++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 468999999999999767999999999999999999999999753 4799999999999999999999999999
Q ss_pred EEEEEecCCCCcCCCCCCC-CCCCCCceEEEEEEEee
Q psy4385 101 VAVFTCKPEYAYGKQGSPP-TIPPDSTLVFEVEMISW 136 (473)
Q Consensus 101 ~~~v~i~~~~ayg~~g~~~-~ip~~~~l~~~v~l~~~ 136 (473)
+++|.|||++|||+.|.++ .|||+++|+|+|+|+++
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999999999999999876 79999999999999987
No 13
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.93 E-value=4.2e-25 Score=216.32 Aligned_cols=218 Identities=16% Similarity=0.200 Sum_probs=183.2
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee--CCeEEEec-----eeeEEeCCC-cccCCcHHHHHHHHhcccCcEEE
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC--EGKVFQEG-----TFSFVLGEG-SEYDIPENLEKALEKFKYKEKSR 217 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~--~g~~~~~~-----~~~~~lg~~-~~~~~~~gle~al~~m~~gE~~~ 217 (473)
+.++.++++++|.|. .|..|+.|+|||.|++ +|++|++. +++|.+|.+ . +++||+.+|.+|++||++.
T Consensus 48 ~~~~~~~~~~~g~g~-~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~---~i~g~e~~l~~m~~Ge~~~ 123 (338)
T 2if4_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKK---ELAGLAIGVASMKSGERAL 123 (338)
T ss_dssp ETTEEEEEEECCBSC-CCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCG---GGHHHHHHHHHCCBTCEEE
T ss_pred CCCeEEEEEeCCCCC-CCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCc---ccHHHHHHHhcCCCCCeEE
Confidence 356899999999995 8999999999999998 59999973 899999987 6 9999999999999999999
Q ss_pred EEecCCCCCCCCCCCC-CCCCCCCCceeeeeeccccccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHh
Q psy4385 218 LFVQPQHLWSGKGNDK-LGVPSNKPATYTITMNNFEKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAI 296 (473)
Q Consensus 218 ~~i~~~~~~~~~g~~~-~~ip~~~~~~y~i~L~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al 296 (473)
|.|+|.++||..+... ..||+++.+.|.+.|..+....+.+. .+..++
T Consensus 124 ~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~-------------------------------~~~~~~ 172 (338)
T 2if4_A 124 VHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKA-------------------------------RSDMTV 172 (338)
T ss_dssp EEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBT-------------------------------TTBCCH
T ss_pred EEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccc-------------------------------cccCCH
Confidence 9999999999988642 35999999999999988876322210 111111
Q ss_pred hhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCH-----------------HHHHHHH
Q psy4385 297 PYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNE-----------------KAFFRRG 359 (473)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~-----------------ka~~~~g 359 (473)
...+..+..+.++|.++++.++|++|+..|.+|+.++|++. .+|+++|
T Consensus 173 ---------------~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla 237 (338)
T 2if4_A 173 ---------------EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIA 237 (338)
T ss_dssp ---------------HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHH
Confidence 22334466788999999999999999999999999999877 4999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 360 NAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 360 ~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
.||+.+++|++|+.+|.++++++|++..++..++.++..+++..++.. .|++++
T Consensus 238 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~-~l~~al 291 (338)
T 2if4_A 238 ACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARD-DFRKAQ 291 (338)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH-HHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH-HHHHHH
Confidence 999999999999999999999999999999999999988876665443 444443
No 14
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.93 E-value=3.4e-25 Score=180.53 Aligned_cols=110 Identities=48% Similarity=0.799 Sum_probs=103.9
Q ss_pred cCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEe
Q psy4385 27 TDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTC 106 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i 106 (473)
..++|+.|+++++|+|...|+.||.|+|||++++.||++|++++..+.|+.|.+|.+.+++||+++|.+|++|++++|.|
T Consensus 3 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp ECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 35679999999999997449999999999999999999999998777899999999999999999999999999999999
Q ss_pred cCCCCcCCCCCCCCCCCCCceEEEEEEEee
Q psy4385 107 KPEYAYGKQGSPPTIPPDSTLVFEVEMISW 136 (473)
Q Consensus 107 ~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~ 136 (473)
||++|||..+.++.|||+++++|+|+|+++
T Consensus 83 p~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 83 PGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred CHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 999999999988899999999999999987
No 15
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.92 E-value=4.5e-25 Score=178.09 Aligned_cols=106 Identities=49% Similarity=0.874 Sum_probs=101.0
Q ss_pred CEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCC
Q psy4385 31 GVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEY 110 (473)
Q Consensus 31 gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ 110 (473)
||.|+++++|+|...|+.||.|++||++++.||++|++++..+.|+.|.+|.+.+++||+++|.+|++|++++|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 78999999999975599999999999999999999999987667999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCCCceEEEEEEEee
Q psy4385 111 AYGKQGSPPTIPPDSTLVFEVEMISW 136 (473)
Q Consensus 111 ayg~~g~~~~ip~~~~l~~~v~l~~~ 136 (473)
|||+.+.++.|||+++++|+|+|+++
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999988899999999999999987
No 16
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.92 E-value=1.2e-24 Score=181.45 Aligned_cols=115 Identities=43% Similarity=0.829 Sum_probs=104.7
Q ss_pred ceecCCCCEEEEEEeCC-CC-CCCCCCCCEEEEEEEEEe-cCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCc
Q psy4385 24 IDLTDDGGVLKEIKTPG-VG-DTTPSAGCKVKVHYTGTL-LDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDE 100 (473)
Q Consensus 24 ~~~~~~~gv~~~i~~~g-~g-~~~~~~gd~V~v~y~~~~-~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge 100 (473)
++.+.+++++++++++| .| ...|+.||.|+|||++++ .||++|++|+..+.|+.|.+|.+.+++||+++|.+|++|+
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge 89 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNE 89 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred cEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCC
Confidence 34457788888999977 44 247999999999999999 7999999998777899999999999999999999999999
Q ss_pred EEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeeee
Q psy4385 101 VAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWEA 138 (473)
Q Consensus 101 ~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~ 138 (473)
+++|.|||++|||..+.++.|||+++++|+|+|+++..
T Consensus 90 ~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 90 KCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 99999999999999999889999999999999999864
No 17
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.92 E-value=1.2e-24 Score=181.70 Aligned_cols=109 Identities=49% Similarity=0.790 Sum_probs=103.8
Q ss_pred cCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEe
Q psy4385 27 TDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTC 106 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i 106 (473)
+.++|+.|+++++|+|. .|+.||.|+|||++++.||++|++++..+.|+.|.+|.+.+++||+++|.+|++||+++|.|
T Consensus 25 ~~~~gl~~~~l~~G~G~-~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~i 103 (133)
T 2y78_A 25 TTESGLKYEDLTEGSGA-EARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI 103 (133)
T ss_dssp ECTTSCEEEEEECCSSC-BCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEEE
T ss_pred ECCCCEEEEEEEcCCCC-CCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEE
Confidence 46789999999999996 79999999999999999999999998777899999999999999999999999999999999
Q ss_pred cCCCCcCCCCCCCCCCCCCceEEEEEEEee
Q psy4385 107 KPEYAYGKQGSPPTIPPDSTLVFEVEMISW 136 (473)
Q Consensus 107 ~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~ 136 (473)
||++|||+.+.++.|||+++++|+|+|++|
T Consensus 104 p~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 104 PPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred CcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 999999999988889999999999999975
No 18
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.92 E-value=2.3e-25 Score=186.64 Aligned_cols=115 Identities=37% Similarity=0.648 Sum_probs=100.0
Q ss_pred cCccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEec-CCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCC
Q psy4385 20 ESKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLL-DGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKK 98 (473)
Q Consensus 20 ~~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~-dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~ 98 (473)
++.+++ .++||+|+++++|+|. .+..||.|+|||++++. +|++|++++..+.|+.|.+|.+.+++||+++|.+|++
T Consensus 18 ~~~~v~--~~~gl~~~vl~~G~g~-~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~ 94 (134)
T 3b7x_A 18 RMLDIS--GDRGVLKDVIREGAGD-LVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRR 94 (134)
T ss_dssp TCEESS--SSSSEEEEEEECCEEE-ECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEE
T ss_pred ccceee--CCCCEEEEEEEcCCCC-CCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCC
Confidence 445554 8899999999999997 68899999999999998 6999999987778999999999999999999999999
Q ss_pred CcEEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeee
Q psy4385 99 DEVAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWE 137 (473)
Q Consensus 99 Ge~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~ 137 (473)
|++++|.|||++|||..+.++.|||+++|+|+|+|++|.
T Consensus 95 Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 95 GELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 999999999999999999988999999999999999984
No 19
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.92 E-value=1e-24 Score=181.43 Aligned_cols=109 Identities=53% Similarity=0.917 Sum_probs=102.7
Q ss_pred CCCCEEEE--EEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEE
Q psy4385 28 DDGGVLKE--IKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFT 105 (473)
Q Consensus 28 ~~~gv~~~--i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~ 105 (473)
+++|+.++ ++++|+|...|+.||.|+|||++++.||++|++++..+.|+.|.+|.+.+++||+++|.+|++||+++|.
T Consensus 20 ~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ 99 (130)
T 2lgo_A 20 GSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFT 99 (130)
T ss_dssp SSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEE
T ss_pred CCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 56788888 9999999844999999999999999999999999887789999999999999999999999999999999
Q ss_pred ecCCCCcCCCCCCCCCCCCCceEEEEEEEee
Q psy4385 106 CKPEYAYGKQGSPPTIPPDSTLVFEVEMISW 136 (473)
Q Consensus 106 i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~ 136 (473)
|||++|||+.+.++.|||+++++|+|+|++|
T Consensus 100 ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 100 IPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp ECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred ECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9999999999998899999999999999975
No 20
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.91 E-value=4.1e-24 Score=191.32 Aligned_cols=104 Identities=36% Similarity=0.601 Sum_probs=99.3
Q ss_pred CCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEec
Q psy4385 28 DDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCK 107 (473)
Q Consensus 28 ~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~ 107 (473)
.++|+.|+++++|+|. .|..||.|+|||++++.||++||+| +.|+.|.+| .+|+||+++|.+|++|++++|+||
T Consensus 115 ~~sGl~y~vl~~G~G~-~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IP 188 (219)
T 3oe2_A 115 LADGILMTELTPGTGP-KPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLVIP 188 (219)
T ss_dssp CGGGCEEEEEECCCSC-CCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCCeEEEEEecCCCc-cCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEEEC
Confidence 5679999999999997 7999999999999999999999998 679999997 799999999999999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCceEEEEEEEeee
Q psy4385 108 PEYAYGKQGSPPTIPPDSTLVFEVEMISWE 137 (473)
Q Consensus 108 ~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~ 137 (473)
|++|||..|.++.|||+++|+|+|+|++|.
T Consensus 189 p~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 189 SDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred chhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 999999999988899999999999999985
No 21
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.91 E-value=7.2e-25 Score=187.38 Aligned_cols=114 Identities=27% Similarity=0.462 Sum_probs=97.6
Q ss_pred ecCCCCEEEEEEeCCCCCC-CCCCCCEEEEEEEEEec--CCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEE
Q psy4385 26 LTDDGGVLKEIKTPGVGDT-TPSAGCKVKVHYTGTLL--DGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVA 102 (473)
Q Consensus 26 ~~~~~gv~~~i~~~g~g~~-~~~~gd~V~v~y~~~~~--dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~ 102 (473)
.++++||.|+|+++|+|.. .++.|+.|+|||++++. ||++||||+.+++|+.|.+|.+++|+||++||.+|++||++
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 4578899999999999973 23689999999999995 59999999999999999999999999999999999999999
Q ss_pred EEEecCCCCcCC--------CCCCCC-----------------------------CCCCCceEEEEEEEeeeec
Q psy4385 103 VFTCKPEYAYGK--------QGSPPT-----------------------------IPPDSTLVFEVEMISWEAE 139 (473)
Q Consensus 103 ~v~i~~~~ayg~--------~g~~~~-----------------------------ip~~~~l~~~v~l~~~~~~ 139 (473)
+|+|||++|||. ...... |+++++|+|+|||++|...
T Consensus 86 ~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P 159 (165)
T 2lkn_A 86 QFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESP 159 (165)
T ss_dssp EEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECT
T ss_pred EEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCC
Confidence 999999999992 001111 3345789999999999753
No 22
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.91 E-value=2e-24 Score=186.59 Aligned_cols=110 Identities=38% Similarity=0.614 Sum_probs=103.0
Q ss_pred cCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEe
Q psy4385 27 TDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTC 106 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i 106 (473)
+.++|++|+++++|+|...|..||.|+|||++++.||++|++++.++.|+.|.+ +.+|+||+++|.+|++|++++|+|
T Consensus 34 ~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~I 111 (167)
T 1jvw_A 34 KLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRLFI 111 (167)
T ss_dssp ECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred ECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEEEEE
Confidence 467899999999999973499999999999999999999999987778999999 589999999999999999999999
Q ss_pred cCCCCcCCCCCCCCCCCCCceEEEEEEEeeee
Q psy4385 107 KPEYAYGKQGSPPTIPPDSTLVFEVEMISWEA 138 (473)
Q Consensus 107 ~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~ 138 (473)
||++|||..|.++.||||++|+|+|+|++|..
T Consensus 112 p~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 112 PYDLAYGVTGGGGMIPPYSPLEFDVELISIKD 143 (167)
T ss_dssp CGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG
T ss_pred CchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc
Confidence 99999999999889999999999999999974
No 23
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.91 E-value=9.5e-24 Score=175.10 Aligned_cols=110 Identities=32% Similarity=0.588 Sum_probs=102.0
Q ss_pred cCCCCEEEEEEeCCC--CCCCCCCCCEEEEEEEEEec-CCCEEeccCC--CCccEEEEeCCCccchhHHHHhccCCCCcE
Q psy4385 27 TDDGGVLKEIKTPGV--GDTTPSAGCKVKVHYTGTLL-DGTVFDSSKT--RGEPFEFDLGKGQVIKAWDRGIATMKKDEV 101 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~--g~~~~~~gd~V~v~y~~~~~-dg~~~~st~~--~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~ 101 (473)
..++|+.++++++|. | ..|+.||.|+|||++++. ||++|++|+. .+.|+.|.+|.+.+++||+++|.+|++|++
T Consensus 9 ~~~~gl~~~~l~~g~~~g-~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 87 (125)
T 4dip_A 9 IPEPEVKIEVLQKPFICH-RKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEK 87 (125)
T ss_dssp CCCCCCEEEEEECCSCCS-CCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCE
T ss_pred ECCCCeEEEEEEcCCCCC-CcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCE
Confidence 357899999999998 5 479999999999999998 9999999974 467999999999999999999999999999
Q ss_pred EEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeeee
Q psy4385 102 AVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWEA 138 (473)
Q Consensus 102 ~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~ 138 (473)
++|.|||++|||+.|.+ .|||+++|+|+|+|+++..
T Consensus 88 ~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 88 RKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp EEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEc
Confidence 99999999999999965 8999999999999999863
No 24
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.91 E-value=7.9e-24 Score=190.28 Aligned_cols=110 Identities=48% Similarity=0.794 Sum_probs=105.0
Q ss_pred ecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEE
Q psy4385 26 LTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFT 105 (473)
Q Consensus 26 ~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~ 105 (473)
.+.++|++|+++++|+|. .|..||.|+|||++++.||++|++|+..+.|+.|.+|.+.+++||+++|.+|++|++++|.
T Consensus 100 ~~~~sGl~~~vl~~G~G~-~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~ 178 (209)
T 3uf8_A 100 VTTESGLKYEDLTEGSGA-EARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 178 (209)
T ss_dssp EECTTSCEEEEEECCCSC-BCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEEE
T ss_pred cCCCCceEEEEEEcCCCC-cCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEEE
Confidence 456789999999999997 6999999999999999999999999888889999999999999999999999999999999
Q ss_pred ecCCCCcCCCCCCCCCCCCCceEEEEEEEee
Q psy4385 106 CKPEYAYGKQGSPPTIPPDSTLVFEVEMISW 136 (473)
Q Consensus 106 i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~ 136 (473)
|||++|||+.|.++.|||+++|+|+|+|++|
T Consensus 179 Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 179 IPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9999999999998899999999999999975
No 25
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.91 E-value=1.5e-23 Score=171.91 Aligned_cols=112 Identities=33% Similarity=0.502 Sum_probs=102.4
Q ss_pred cCccceecCCCCEEEEEEeCCCCC-CCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCC
Q psy4385 20 ESKAIDLTDDGGVLKEIKTPGVGD-TTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKK 98 (473)
Q Consensus 20 ~~~~~~~~~~~gv~~~i~~~g~g~-~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~ 98 (473)
+|+++ +.+++++|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+.+++||+++|.+|++
T Consensus 5 ~~~~~--~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~ 78 (118)
T 2awg_A 5 EWLDI--LGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDV 78 (118)
T ss_dssp CEEES--SSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCT
T ss_pred cceEE--CCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCC
Confidence 44444 45677999999999986 36999999999999999999999985 6999999999999999999999999
Q ss_pred CcEEEEEecCCCCcCCCCCCCCCCCCCceEEEEEEEeee
Q psy4385 99 DEVAVFTCKPEYAYGKQGSPPTIPPDSTLVFEVEMISWE 137 (473)
Q Consensus 99 Ge~~~v~i~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~ 137 (473)
|++++|.|||++|||..+.++.|||+++++|+|+|+++.
T Consensus 79 Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 79 GETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 999999999999999999988999999999999999874
No 26
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.91 E-value=1.3e-23 Score=179.30 Aligned_cols=109 Identities=32% Similarity=0.501 Sum_probs=100.3
Q ss_pred cCCCCEEEEEEeCCCCC-CCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEE
Q psy4385 27 TDDGGVLKEIKTPGVGD-TTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFT 105 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~g~-~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~ 105 (473)
+.+|.+.|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+.+++||+++|.+|++|++++|+
T Consensus 40 ~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~ 115 (157)
T 2jwx_A 40 LGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAMVT 115 (157)
T ss_dssp SSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEEEE
T ss_pred CCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 34555689999999985 36999999999999999999999984 69999999999999999999999999999999
Q ss_pred ecCCCCcCCCC-CCCCCCCCCceEEEEEEEeeeec
Q psy4385 106 CKPEYAYGKQG-SPPTIPPDSTLVFEVEMISWEAE 139 (473)
Q Consensus 106 i~~~~ayg~~g-~~~~ip~~~~l~~~v~l~~~~~~ 139 (473)
|||++|||..| .++.|||+++|+|+|+|+++...
T Consensus 116 IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 116 ADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp ECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred ECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence 99999999999 77889999999999999999754
No 27
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.90 E-value=1e-23 Score=189.13 Aligned_cols=109 Identities=32% Similarity=0.556 Sum_probs=102.8
Q ss_pred cCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEe
Q psy4385 27 TDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTC 106 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i 106 (473)
++++|+.|+++++|+|. .|..||.|+|||++++.||++|++++.++.|+.|.+ +.+|+||+++|.+|++|++++|+|
T Consensus 103 ~~~sGl~y~vl~~G~G~-~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~I 179 (213)
T 1fd9_A 103 VLPSGLQYKVINSGNGV-KPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIYV 179 (213)
T ss_dssp ECTTSCEEEEEECCCSC-CCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred ECCCccEEEEEecCCCc-cCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEEE
Confidence 46789999999999996 799999999999999999999999987778999999 579999999999999999999999
Q ss_pred cCCCCcCCCCCCCCCCCCCceEEEEEEEeeee
Q psy4385 107 KPEYAYGKQGSPPTIPPDSTLVFEVEMISWEA 138 (473)
Q Consensus 107 ~~~~ayg~~g~~~~ip~~~~l~~~v~l~~~~~ 138 (473)
||+++||..|.++.|||+++|+|+|+|+++..
T Consensus 180 P~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 180 PSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp CGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred CchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 99999999998889999999999999999863
No 28
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=1.8e-23 Score=183.56 Aligned_cols=111 Identities=32% Similarity=0.504 Sum_probs=104.1
Q ss_pred CCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEec-CCCEEeccCCCCccEEEEeCCC-ccchhHHHHhccCCCCcEEEEE
Q psy4385 28 DDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLL-DGTVFDSSKTRGEPFEFDLGKG-QVIKAWDRGIATMKKDEVAVFT 105 (473)
Q Consensus 28 ~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~-dg~~~~st~~~~~p~~~~~g~~-~~~~g~~~~l~~m~~Ge~~~v~ 105 (473)
.++|++|+++++|+|. .|..||.|+|||++++. ||++|++|+..+.|+.|.+|.+ .+++||+++|.+|++|++++|.
T Consensus 47 ~~~gl~~~vl~~G~G~-~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~ 125 (180)
T 2f4e_A 47 LDEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (180)
T ss_dssp EETTEEEEEEECCBSC-CBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE
T ss_pred CCCceEEEEEeCCCCC-CCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE
Confidence 4579999999999997 89999999999999998 6999999998888999999999 9999999999999999999999
Q ss_pred ecCCCCcCCCCC--CCCCCCCCceEEEEEEEeeeec
Q psy4385 106 CKPEYAYGKQGS--PPTIPPDSTLVFEVEMISWEAE 139 (473)
Q Consensus 106 i~~~~ayg~~g~--~~~ip~~~~l~~~v~l~~~~~~ 139 (473)
|||+++||..|. ++.|||+++|+|+|+|+++...
T Consensus 126 iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~ 161 (180)
T 2f4e_A 126 VGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDET 161 (180)
T ss_dssp ECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCB
T ss_pred ECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecC
Confidence 999999999997 5689999999999999999754
No 29
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.90 E-value=9.6e-24 Score=175.79 Aligned_cols=109 Identities=40% Similarity=0.690 Sum_probs=101.6
Q ss_pred cCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhcc------CCCCc
Q psy4385 27 TDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIAT------MKKDE 100 (473)
Q Consensus 27 ~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~------m~~Ge 100 (473)
+.++|++|+++++|+|. .|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+.+++||+++|.+ |++|+
T Consensus 9 ~~~~Gl~~~~l~~G~G~-~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 9 VSPSGLAFCDKVVGYGP-EAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp ECTTSCEEEEEECCSSC-BCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred ECCCCeEEEEEEcCCCC-CCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 35689999999999997 799999999999999999999999986667999999999999999999998 99999
Q ss_pred EEEEEecCCCCcCCCCCC-----CCCCCCCceEEEEEEEee
Q psy4385 101 VAVFTCKPEYAYGKQGSP-----PTIPPDSTLVFEVEMISW 136 (473)
Q Consensus 101 ~~~v~i~~~~ayg~~g~~-----~~ip~~~~l~~~v~l~~~ 136 (473)
+++|.|||++|||+.+.+ +.|||+++++|+|+|+++
T Consensus 88 ~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 88 KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999998863 579999999999999986
No 30
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.89 E-value=5.1e-23 Score=185.83 Aligned_cols=105 Identities=44% Similarity=0.800 Sum_probs=99.8
Q ss_pred CCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEec
Q psy4385 28 DDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCK 107 (473)
Q Consensus 28 ~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~ 107 (473)
.++|+.|+++++|+|. .|..||.|+|||++++.||++|++|+.++.|+.|.+ +.+|+||+++|.+|++|++++|+||
T Consensus 119 ~~sGl~y~vl~~G~G~-~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP 195 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKGE-APKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVIP 195 (224)
T ss_dssp CTTSCEEEEEECCSSC-CCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEEC
T ss_pred CCCceEEEEEecccCc-cccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEEEC
Confidence 4789999999999997 799999999999999999999999998788999999 5899999999999999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCceEEEEEEEee
Q psy4385 108 PEYAYGKQGSPPTIPPDSTLVFEVEMISW 136 (473)
Q Consensus 108 ~~~ayg~~g~~~~ip~~~~l~~~v~l~~~ 136 (473)
|+++||..+.++ |||+++++|+|+|++|
T Consensus 196 ~~laYG~~g~~~-IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 196 PELAYGKAGVPG-IPPNSTLVFDVELLDV 223 (224)
T ss_dssp GGGTTTTTCBTT-BCTTCCEEEEEEEEEE
T ss_pred chhhcCcCCCCC-CCCCCEEEEEEEEEEe
Confidence 999999999876 9999999999999987
No 31
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=4.3e-23 Score=173.02 Aligned_cols=116 Identities=32% Similarity=0.462 Sum_probs=104.7
Q ss_pred cccCccceecCCCCEEEEEEeCCCCC-CCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccC
Q psy4385 18 MVESKAIDLTDDGGVLKEIKTPGVGD-TTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATM 96 (473)
Q Consensus 18 ~~~~~~~~~~~~~gv~~~i~~~g~g~-~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m 96 (473)
..++++++ .+++++|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+.+++||+++|.+|
T Consensus 7 ~~~~~~~~--~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm 80 (135)
T 2d9f_A 7 GEEWLDIL--GNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLM 80 (135)
T ss_dssp CSSCEESS--SSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGS
T ss_pred cccCcEEC--CCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCC
Confidence 34555554 5677999999999985 46999999999999999999999984 69999999999999999999999
Q ss_pred CCCcEEEEEecCCCCcCCCC-CCCCCCCCCceEEEEEEEeeeec
Q psy4385 97 KKDEVAVFTCKPEYAYGKQG-SPPTIPPDSTLVFEVEMISWEAE 139 (473)
Q Consensus 97 ~~Ge~~~v~i~~~~ayg~~g-~~~~ip~~~~l~~~v~l~~~~~~ 139 (473)
++|++++|.|||++|||..+ .++.|||+++++|+|+|+++...
T Consensus 81 ~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~ 124 (135)
T 2d9f_A 81 DVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDR 124 (135)
T ss_dssp CTTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESS
T ss_pred CCCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecC
Confidence 99999999999999999999 77889999999999999999753
No 32
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.88 E-value=1.5e-22 Score=176.03 Aligned_cols=154 Identities=23% Similarity=0.377 Sum_probs=131.8
Q ss_pred chhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCC---CCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHH
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFD---GGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAK 338 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~---~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~ 338 (473)
.++++..+..+++.|+.+|+.|+|..|+..|.+|+.+++.. ....++++...++....+|+|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 45677889999999999999999999999999999875431 223445566779999999999999999999999999
Q ss_pred HHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 339 DQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK-AAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 339 ~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~-~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
.+|+++|+++|+++++|+++|.+|..+|+|++|+.+|++++.++|++. .+...|..+...++++.+++++.|++||+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999 77999999999999999999999999996
No 33
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.87 E-value=3.7e-22 Score=159.33 Aligned_cols=95 Identities=46% Similarity=0.809 Sum_probs=90.6
Q ss_pred CCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCC
Q psy4385 44 TTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPP 123 (473)
Q Consensus 44 ~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~ 123 (473)
..|+.||.|+|||++++.||++|++|+..+.|+.|.+|.+.+++||+++|.+|++|++++|.|||++|||..+.++.|||
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~ 83 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPG 83 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCT
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCc
Confidence 47899999999999999999999999877789999999999999999999999999999999999999999998889999
Q ss_pred CCceEEEEEEEeeee
Q psy4385 124 DSTLVFEVEMISWEA 138 (473)
Q Consensus 124 ~~~l~~~v~l~~~~~ 138 (473)
+++++|+|+|+++..
T Consensus 84 ~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 84 GATLVFEVELLKIER 98 (102)
T ss_dssp TCCEEEEEEEEEEGG
T ss_pred CCeEEEEEEEEEecc
Confidence 999999999999864
No 34
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=1.7e-20 Score=156.08 Aligned_cols=116 Identities=28% Similarity=0.485 Sum_probs=110.7
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
++.+..++++|+.+|+.|+|++|+..|++|+ +++|.++.+|+++|.|++++|++++|+.+|++++
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 74 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAV---------------KRDPENAILYSNRAACLTKLMEFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHH
Confidence 5678999999999999999999999999999 6677789999999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 346 ELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 346 ~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|+|..++..|+.|.
T Consensus 75 ~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 75 RLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999888764
No 35
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.84 E-value=9.2e-20 Score=163.81 Aligned_cols=181 Identities=24% Similarity=0.369 Sum_probs=138.3
Q ss_pred CceeeeeeccccccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChh-HHHHHHHHHHH
Q psy4385 241 PATYTITMNNFEKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGE-QETERKKTLTA 319 (473)
Q Consensus 241 ~~~y~i~L~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~~~~~ 319 (473)
.......+..|+++++.|.++..+.+..+..+..+|+.++..|+|.+|+..|.+++.+.+........ ...........
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 89 (198)
T 2fbn_A 10 HSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEIS 89 (198)
T ss_dssp ------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH
Confidence 34455567889999999999999999999999999999999999999999999999887764433222 22233445578
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
+++++|.|++++++|++|+.+|+++++++|.++.+++++|.+|..+|+|++|+..|+++++++|++..++..++.+...+
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 169 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKL 169 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcCCC
Q psy4385 400 REQKIKEKQVYANMFDKFAKHD 421 (473)
Q Consensus 400 ~~~~~~~k~~~~~~f~~~~~~~ 421 (473)
++..+.++..|++||.+.....
T Consensus 170 ~~~~~~~~~~~~~~f~~~~~~~ 191 (198)
T 2fbn_A 170 KEARKKDKLTFGGMFDKGPLYE 191 (198)
T ss_dssp HHHHC-----------------
T ss_pred HHHHHHHHHHHHHHhcccchhh
Confidence 9999999999999998755443
No 36
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.82 E-value=5e-20 Score=173.41 Aligned_cols=115 Identities=30% Similarity=0.629 Sum_probs=103.7
Q ss_pred CccceecCCCCEEEEEEeCCCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCc---cchhHHHHhccCC
Q psy4385 21 SKAIDLTDDGGVLKEIKTPGVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQ---VIKAWDRGIATMK 97 (473)
Q Consensus 21 ~~~~~~~~~~gv~~~i~~~g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~---~~~g~~~~l~~m~ 97 (473)
..++.+..++|++++++++|.|...|+.||.|+|||++++ ||++|+++ |+.|.+|.+. +++||+++|.+|+
T Consensus 159 ~~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~~-----~~~f~lG~g~~~~~i~G~e~~l~gmk 232 (280)
T 1q1c_A 159 GEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRME 232 (280)
T ss_dssp CEECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCC
T ss_pred ccccccccccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEecC-----CeEEEecCCcccccchhHHHHHhCCC
Confidence 3455555899999999999999867999999999999999 99999973 8999999987 5999999999999
Q ss_pred CCcEEEEEecCCCCcCCCCCCC-CCCCCCceEEEEEEEeeeeccC
Q psy4385 98 KDEVAVFTCKPEYAYGKQGSPP-TIPPDSTLVFEVEMISWEAEDI 141 (473)
Q Consensus 98 ~Ge~~~v~i~~~~ayg~~g~~~-~ip~~~~l~~~v~l~~~~~~~~ 141 (473)
+||+++|.|||+++||..+.++ .|||+++++|+|+|++|...+.
T Consensus 233 ~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~~ 277 (280)
T 1q1c_A 233 KGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKE 277 (280)
T ss_dssp TTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCCC
T ss_pred CCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCCC
Confidence 9999999999999999998766 5999999999999999976543
No 37
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.81 E-value=6.2e-20 Score=156.40 Aligned_cols=137 Identities=17% Similarity=0.178 Sum_probs=119.3
Q ss_pred hHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHH
Q psy4385 264 EKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDK 343 (473)
Q Consensus 264 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 343 (473)
.....+..+++.|+.+++.|+|++|+..|++||.+.+...... .....|....+|+|+|.|+.++|+|++|+.+|++
T Consensus 6 ~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~k 82 (159)
T 2hr2_A 6 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADK 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3356788999999999999999999999999998887632211 1123455677999999999999999999999999
Q ss_pred Hhhh-------CCCCHHHH----HHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4385 344 AIEL-------EPNNEKAF----FRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQK 403 (473)
Q Consensus 344 al~~-------~p~~~ka~----~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 403 (473)
||++ +|++.++| |++|.++..+|+|++|+.+|++|++++|++..+...+..+.+.+....
T Consensus 83 AL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~ 153 (159)
T 2hr2_A 83 ALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRI 153 (159)
T ss_dssp HHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHH
T ss_pred HHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999 999999999999999999999999999999999888888887764443
No 38
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.78 E-value=2.2e-18 Score=170.43 Aligned_cols=155 Identities=34% Similarity=0.557 Sum_probs=134.2
Q ss_pred CchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCC-CCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHH
Q psy4385 261 NSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDG-GFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKD 339 (473)
Q Consensus 261 ~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~ 339 (473)
+.++....+..++.+|+.+++.|+|++|+..|++|+.+++... ....++...+.+....+|+|+|.||+++++|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 3677888899999999999999999999999999997654310 011122223788899999999999999999999999
Q ss_pred HHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 340 QCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 340 ~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
+|++||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|++..++..+..+...+++..++++..|++||+
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999984
No 39
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.73 E-value=2.1e-17 Score=135.66 Aligned_cols=104 Identities=25% Similarity=0.449 Sum_probs=96.3
Q ss_pred CCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEe------------ceeeEEeCCCcccCCcHHHHHHHHhcc
Q psy4385 145 HDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQE------------GTFSFVLGEGSEYDIPENLEKALEKFK 211 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~------------~~~~~~lg~~~~~~~~~gle~al~~m~ 211 (473)
.+.++.++++++|+|...|..++.|++||.|++ +|++|++ .++.|.+|.+. +++||+.||..|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~---~i~G~e~~l~gm~ 78 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGK---VIRGWDEALLTMS 78 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSS---SCHHHHHHHTTCC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCC---hhHHHHHHHhCCC
Confidence 456799999999999888999999999999998 9999997 47899999887 9999999999999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeeccc
Q psy4385 212 YKEKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNF 251 (473)
Q Consensus 212 ~gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~ 251 (473)
.||++.+.+||.++||..+.....||+++.+.|+++|.++
T Consensus 79 ~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 79 KGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp TTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred CCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999999999999999998876679999999999999875
No 40
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.73 E-value=1.6e-17 Score=138.18 Aligned_cols=114 Identities=28% Similarity=0.339 Sum_probs=101.9
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
..+.+.+++++|+.+|+.|+|++|+..|++|| +++|.++.+|+|+|.||+++|+|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al---------------~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAI---------------ELDPSNITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 45678899999999999999999999999999 666777899999999999999999999999999
Q ss_pred hhhCCCCH-------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy4385 345 IELEPNNE-------KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQ 394 (473)
Q Consensus 345 l~~~p~~~-------ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~ 394 (473)
++++|++. ++|+++|.++..+++|++|+..|++++.++|+ ++....|..
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~ 124 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKE 124 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHH
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHH
Confidence 99998764 68999999999999999999999999999986 555444443
No 41
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.73 E-value=2.9e-17 Score=139.00 Aligned_cols=111 Identities=27% Similarity=0.481 Sum_probs=102.3
Q ss_pred eccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcc
Q psy4385 138 AEDISPTHDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFK 211 (473)
Q Consensus 138 ~~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~ 211 (473)
..++++..|+++.++++++|.|...|..++.|+|||.|++ +|++|++. |+.|.+|.+. +++||+.+|..|+
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~---~i~G~e~~l~gm~ 102 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQ---VIKAWDIGVATMK 102 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSS---SCHHHHHHHTTCC
T ss_pred cccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCc---ccHHHHHHHhCCC
Confidence 3567777899999999999999889999999999999999 99999973 6999999887 9999999999999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeecccc
Q psy4385 212 YKEKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFE 252 (473)
Q Consensus 212 ~gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~ 252 (473)
+||++.|.|+|.++||..+.. ..||+++.+.|++.|.++.
T Consensus 103 ~Ge~~~v~ipp~~aYG~~g~~-~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 103 KGEICHLLCKPEYAYGSAGSL-PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp BTCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChHHCcCCCCCC-CCcCCCCeEEEEEEEEEec
Confidence 999999999999999999876 4799999999999998874
No 42
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.72 E-value=3.4e-17 Score=135.45 Aligned_cols=117 Identities=24% Similarity=0.319 Sum_probs=109.9
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|.+|+..|++++ .+.|.+..+++++|.|++++|+|++|+.+|++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al---------------~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMI---------------KRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHH---------------HhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 57789999999999999999999999999 556667899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQID------PNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~------P~~~~~~~~l~~~~~~~ 399 (473)
+|+++.+|+++|.++..+|++++|+..|+++++++ |++..++..+..+..++
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999 99999999888887653
No 43
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.70 E-value=7.1e-17 Score=138.43 Aligned_cols=115 Identities=17% Similarity=0.113 Sum_probs=105.9
Q ss_pred ccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhH
Q psy4385 257 TWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKP 336 (473)
Q Consensus 257 ~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~ 336 (473)
.+.......+..+..+..+|..++..|+|++|+..|++++ .++|.++.+|+++|.|+..+|+|++
T Consensus 24 ~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al---------------~~~P~~~~~~~~lg~~~~~~g~~~~ 88 (151)
T 3gyz_A 24 TLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLC---------------IYDFYNVDYIMGLAAIYQIKEQFQQ 88 (151)
T ss_dssp CTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred CHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHHccHHH
Confidence 3333445556778899999999999999999999999999 7777789999999999999999999
Q ss_pred HHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 337 AKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 337 A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
|+.+|+++++++|+++.+|+++|.||..+|++++|+..|+++++++|+.+
T Consensus 89 Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 89 AADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999999999999999865
No 44
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.69 E-value=2.1e-16 Score=131.06 Aligned_cols=110 Identities=27% Similarity=0.484 Sum_probs=100.8
Q ss_pred ccCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhccc
Q psy4385 139 EDISPTHDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKY 212 (473)
Q Consensus 139 ~~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~ 212 (473)
.+++...|+++.++++++|.|...|..++.|++||.|++ +|++|++. |+.|.+|.+. +++||+.+|..|+.
T Consensus 11 ~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~---~i~G~e~~l~gm~~ 87 (128)
T 3o5q_A 11 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQ---VIKAWDIGVATMKK 87 (128)
T ss_dssp EECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSS---SCHHHHHHHTTCCT
T ss_pred ceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCC---ccHHHHHHHhcCCC
Confidence 455666889999999999999878999999999999999 99999973 7999999887 99999999999999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeecccc
Q psy4385 213 KEKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFE 252 (473)
Q Consensus 213 gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~ 252 (473)
||++.+.+||.++||..+.. ..||+++.+.|++.|.++.
T Consensus 88 Ge~~~v~ip~~~aYG~~g~~-~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 88 GEICHLLCKPEYAYGSAGSL-PKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp TCEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHcCCCCCCC-CCcCCCCEEEEEEEEEEec
Confidence 99999999999999999876 4799999999999998875
No 45
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.69 E-value=1.3e-16 Score=139.84 Aligned_cols=120 Identities=18% Similarity=0.312 Sum_probs=96.5
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee--CCeEEEec-----eeeEEeCCC-cccCCcHHHHHHHHhcccCcEEE
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC--EGKVFQEG-----TFSFVLGEG-SEYDIPENLEKALEKFKYKEKSR 217 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~--~g~~~~~~-----~~~~~lg~~-~~~~~~~gle~al~~m~~gE~~~ 217 (473)
+.++.++++++|.| ..|..|+.|+|||.|++ +|++|++. ++.|.+|.+ . +++||+.+|..|++||++.
T Consensus 48 ~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~---vi~G~eeaL~gMk~Ge~~~ 123 (180)
T 2f4e_A 48 DEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKK---ELAGLAIGVASMKSGERAL 123 (180)
T ss_dssp ETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCG---GGHHHHHHHTTCCBTCEEE
T ss_pred CCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCc---hhHHHHHHHhCCCCCCEEE
Confidence 35689999999998 48999999999999998 59999973 789999987 6 9999999999999999999
Q ss_pred EEecCCCCCCCCCCC-CCCCCCCCCceeeeeecccccccc---ccccCchhHHHhh
Q psy4385 218 LFVQPQHLWSGKGND-KLGVPSNKPATYTITMNNFEKIKD---TWQLNSDEKLEQG 269 (473)
Q Consensus 218 ~~i~~~~~~~~~g~~-~~~ip~~~~~~y~i~L~~~~~~~~---~~~~~~~~~~~~a 269 (473)
|.|||.++||..+.. ...||+++.+.|++.|.++....+ .|.|+.++++..|
T Consensus 124 v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 124 VHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 999999999998863 235999999999999999988777 8999999988765
No 46
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.68 E-value=6.3e-17 Score=138.72 Aligned_cols=112 Identities=12% Similarity=0.117 Sum_probs=54.8
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..|++.|+|++|+..|++++ .++|.++.+|+++|.|+.++|++++|+.+|++++++
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al---------------~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYI---------------NVQERDPKAHRFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 33444445555555555555555555555 333344445555555555555555555555555555
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHH-HHHHHhcCCCCHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKD-FQKVLQIDPNNKAAVQKLTQ 394 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~-~~~al~l~P~~~~~~~~l~~ 394 (473)
+|+++.+|+++|.+|..+|++++|... +++|++++|+++.++..+..
T Consensus 95 ~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ 142 (150)
T 4ga2_A 95 NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQ 142 (150)
T ss_dssp CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 555555555555555555554443333 24555555555544444333
No 47
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.68 E-value=2.6e-16 Score=136.63 Aligned_cols=112 Identities=20% Similarity=0.242 Sum_probs=104.0
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|++|+..|++++ .+.|.+..+++++|.||+++|+|++|+.+|++++
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 72 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQAL---------------SIAPANPIYLSNRAAAYSASGQHEKAAEDAELAT 72 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4568899999999999999999999999999 5566678999999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy4385 346 ELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKL 392 (473)
Q Consensus 346 ~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l 392 (473)
+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..+
T Consensus 73 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 119 (164)
T 3sz7_A 73 VVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119 (164)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 99999999999999999999999999999999999999998754433
No 48
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.67 E-value=2.3e-16 Score=135.15 Aligned_cols=127 Identities=14% Similarity=0.067 Sum_probs=110.0
Q ss_pred hhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHH
Q psy4385 274 ERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEK 353 (473)
Q Consensus 274 ~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~k 353 (473)
.+|..+..+|++++|+..|++++ ...|.+...++++|.+|+++|+|++|+.+++++++++|+++.
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~---------------~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~ 66 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGST---------------PSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPK 66 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHS---------------CSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhc---------------ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 37889999999999999999999 567788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 354 AFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 354 a~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
+|+++|.+|..+|++++|+..|+++++++|++..++..++.+...+++..++.+..+++...
T Consensus 67 a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~ 128 (150)
T 4ga2_A 67 AHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAK 128 (150)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988776655444433444443
No 49
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.67 E-value=1.1e-16 Score=129.02 Aligned_cols=84 Identities=19% Similarity=0.361 Sum_probs=75.4
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCC
Q psy4385 45 TPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPD 124 (473)
Q Consensus 45 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~ 124 (473)
.++.||.|+|||++++ ||++|++++ +.|+.|.+|.++++|||+++|.+|++|++++|.||+...||..+. ++
T Consensus 29 ~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~-----~g 100 (113)
T 1hxv_A 29 KLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL-----QS 100 (113)
T ss_dssp CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG-----GS
T ss_pred CCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC-----CC
Confidence 6899999999999999 999999995 579999999999999999999999999999999973333998663 67
Q ss_pred CceEEEEEEEee
Q psy4385 125 STLVFEVEMISW 136 (473)
Q Consensus 125 ~~l~~~v~l~~~ 136 (473)
++++|+|+|+++
T Consensus 101 ~~l~F~V~l~~V 112 (113)
T 1hxv_A 101 KPVTFEVVLKAI 112 (113)
T ss_dssp CCCEEEEEECCB
T ss_pred CEEEEEEEEEEE
Confidence 999999999876
No 50
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.66 E-value=8.2e-16 Score=128.62 Aligned_cols=110 Identities=22% Similarity=0.477 Sum_probs=100.2
Q ss_pred cCCCCCCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEe-----ceeeEEeCCCcccCCcHHHHHHHHhcccC
Q psy4385 140 DISPTHDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQE-----GTFSFVLGEGSEYDIPENLEKALEKFKYK 213 (473)
Q Consensus 140 ~~~~~~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~-----~~~~~~lg~~~~~~~~~gle~al~~m~~g 213 (473)
++++..++++.++++++|.|...|..++.|++||.|++ +|++|++ .++.|.+|.+. +++||+.||..|+.|
T Consensus 7 dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~---vi~G~e~~l~gm~~G 83 (135)
T 1r9h_A 7 DITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGN---VIKGWDLGVATMTKG 83 (135)
T ss_dssp ECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTS---SCHHHHHHHTTCCBT
T ss_pred ecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCC---ccHHHHHHHhcCCCC
Confidence 34555788999999999999778999999999999999 9999997 48999999887 999999999999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeeccccc
Q psy4385 214 EKSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEK 253 (473)
Q Consensus 214 E~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~ 253 (473)
|++.+.++|.++||..+.+ ..||+++.+.|++.|.++..
T Consensus 84 e~~~v~ip~~~aYG~~g~~-~~Ip~~~~l~f~v~l~~i~~ 122 (135)
T 1r9h_A 84 EVAEFTIRSDYGYGDAGSP-PKIPGGATLIFEVELFEWSA 122 (135)
T ss_dssp CEEEEEECGGGTTTTTCBT-TTBCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEEChHHcCCCCCCC-CCcCcCCcEEEEEEEEEeec
Confidence 9999999999999998864 36999999999999999865
No 51
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.66 E-value=4.1e-16 Score=132.89 Aligned_cols=106 Identities=19% Similarity=0.315 Sum_probs=95.9
Q ss_pred CCCCceEEEEecCCCc-CCCCCCCeEEEEEEeee-CCeEEEe-ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEec
Q psy4385 145 HDGGIRREILEEGASF-STPKDGANVEITLKGEC-EGKVFQE-GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQ 221 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~-~~p~~~~~v~~~~~g~~-~g~~~~~-~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~ 221 (473)
.+|.+.++++++|+|. ..|..++.|+|||.|++ +|++||+ .+++|.+|.+. +++||+.+|..|++||++.|.||
T Consensus 41 ~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~~p~~f~lG~g~---vi~G~eeaL~gMk~Ge~~~v~IP 117 (157)
T 2jwx_A 41 GNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCD---VIQALDLSVPLMDVGETAMVTAD 117 (157)
T ss_dssp SSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEEEEEEEETTTTS---SCHHHHHHTTTSCTTCEEEEEEC
T ss_pred CCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecCCCEEEEeCCCC---hhHHHHHHHcCCCCCCEEEEEEC
Confidence 5666789999999983 58999999999999998 9999998 58999999887 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeeeeccccc
Q psy4385 222 PQHLWSGKGNDKLGVPSNKPATYTITMNNFEK 253 (473)
Q Consensus 222 ~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~ 253 (473)
|.++||..+.....||+++.+.|+++|.++..
T Consensus 118 ~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~ 149 (157)
T 2jwx_A 118 SKYCYGPQGSRSPYIPPHAALCLEVTLKTAVD 149 (157)
T ss_dssp GGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEE
T ss_pred chhcCCcccccCCCcCCCCeEEEEEEEEEEEc
Confidence 99999998844456999999999999988765
No 52
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.65 E-value=4.5e-16 Score=133.66 Aligned_cols=85 Identities=25% Similarity=0.443 Sum_probs=78.6
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCC
Q psy4385 45 TPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPD 124 (473)
Q Consensus 45 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~ 124 (473)
.++.||.|+|||++++.||++|++|+..+.|+.|.+|.++++|||+++|.+|++|++++|.|||++|||+ .+
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~--------~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGV--------PS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCC--------CC
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCC--------CC
Confidence 5899999999999999999999999876689999999999999999999999999999999999999999 56
Q ss_pred CceEEEEEEEeee
Q psy4385 125 STLVFEVEMISWE 137 (473)
Q Consensus 125 ~~l~~~v~l~~~~ 137 (473)
..++..|....|.
T Consensus 96 ~~lv~~vp~~~f~ 108 (169)
T 4dt4_A 96 PDLIQYFSRREFM 108 (169)
T ss_dssp GGGEEEEEGGGGT
T ss_pred hHHEEEeCHHHCC
Confidence 7888888877765
No 53
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.65 E-value=8.3e-16 Score=130.16 Aligned_cols=121 Identities=14% Similarity=0.119 Sum_probs=109.1
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
.+..+..+..+|..++..|+|.+|+..|++++ ..+|.+..+++++|.|+..+|+|++|+.+|+++
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALC---------------MLDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH---------------HhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34567788999999999999999999999999 667778899999999999999999999999999
Q ss_pred hhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4385 345 IELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLR 400 (473)
Q Consensus 345 l~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 400 (473)
+.++|+++.+++++|.+|..+|++++|+..|+++++++|+++........+...+.
T Consensus 79 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 79 ALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp HHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876665555554443
No 54
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.65 E-value=5.3e-16 Score=132.60 Aligned_cols=118 Identities=12% Similarity=0.065 Sum_probs=106.4
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
.+..+..+..+|..++..|+|.+|+..|++++ .++|.+..+++++|.|+..+|+|++|+..|+++
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALC---------------VLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHH---------------HcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34567789999999999999999999999999 666778899999999999999999999999999
Q ss_pred hhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 345 IELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 345 l~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
+.++|+++.+++++|.+|..+|++++|+..|+++++++|+++........+..
T Consensus 82 l~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 134 (148)
T 2vgx_A 82 AVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSS 134 (148)
T ss_dssp HHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred HhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999998766544444443
No 55
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.63 E-value=2.2e-15 Score=121.07 Aligned_cols=100 Identities=19% Similarity=0.469 Sum_probs=91.2
Q ss_pred CceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEec
Q psy4385 148 GIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQ 221 (473)
Q Consensus 148 ~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~ 221 (473)
++.++++++|+|...|..++.|++||.+++ +|++|++. +++|.+|.+. +++||+.||..|+.||++.+.+|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~---~i~g~~~~l~gm~~Ge~~~~~ip 77 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQE---VIRGWEEGVAQMSVGQRAKLTIS 77 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCC---SCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCC---hHHHHHHHHhCCCCCCEEEEEEC
Confidence 467899999999767999999999999999 99999973 7899999887 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeeeeccc
Q psy4385 222 PQHLWSGKGNDKLGVPSNKPATYTITMNNF 251 (473)
Q Consensus 222 ~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~ 251 (473)
|.++||..+... .||+++.+.|+++|.++
T Consensus 78 ~~~ayG~~~~~~-~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 78 PDYAYGATGHPG-IIPPHATLVFDVELLKL 106 (107)
T ss_dssp GGGTTTTTCBTT-TBCTTCCEEEEEEEEEE
T ss_pred HHHccCCCCCCC-CcCCCCeEEEEEEEEEe
Confidence 999999987654 49999999999998765
No 56
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.63 E-value=4e-16 Score=133.23 Aligned_cols=79 Identities=16% Similarity=0.327 Sum_probs=71.6
Q ss_pred CCCceEEEEecCCCcCC-CCCCCeEEEEEEeee---CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEE
Q psy4385 146 DGGIRREILEEGASFST-PKDGANVEITLKGEC---EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKS 216 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~-p~~~~~v~~~~~g~~---~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~ 216 (473)
+.++.++++++|+|... +..|++|+|||.|++ +|++|||+ |++|.+|.+. +++||+.+|.+|++||++
T Consensus 9 ~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~---vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 9 EDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKF---KLPVWETIVCTMREGEIA 85 (165)
T ss_dssp TTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSC---SCSHHHHHHTTCCTTCEE
T ss_pred CCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCC---ccHHHHHHHhcCccCceE
Confidence 56799999999999543 368999999999998 49999983 8999999998 999999999999999999
Q ss_pred EEEecCCCCCC
Q psy4385 217 RLFVQPQHLWS 227 (473)
Q Consensus 217 ~~~i~~~~~~~ 227 (473)
.|+|||.++||
T Consensus 86 ~~~ipp~laYG 96 (165)
T 2lkn_A 86 QFLCDIKHVVL 96 (165)
T ss_dssp EEECCHHHHSS
T ss_pred EEEECHHHhcC
Confidence 99999999998
No 57
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.62 E-value=1.1e-14 Score=131.85 Aligned_cols=119 Identities=15% Similarity=0.077 Sum_probs=110.6
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHH----------------HHHHHHHc
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLN----------------AAMCLLKL 331 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~n----------------la~~~~kl 331 (473)
.+..+...|..++..|+|++|+..|++++ .++|.++.++++ +|.++.++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 67 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTI---------------ALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKN 67 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHH---------------HhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC
Confidence 35677889999999999999999999999 677778888888 99999999
Q ss_pred CChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4385 332 KQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 332 ~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 401 (473)
|+|++|+..|+++++++|+++.+++++|.+|..+|++++|+..|+++++++|++..++..++.++.....
T Consensus 68 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 68 RNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999999999999999999999999999999998765543
No 58
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.62 E-value=3.5e-15 Score=121.04 Aligned_cols=102 Identities=21% Similarity=0.414 Sum_probs=92.4
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEE
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLF 219 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~ 219 (473)
+.++.++++++|.|...|..++.|++||.|++ +|++|++. ++.|.+|.+. +++||+.+|..|+.||++.+.
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~---~i~g~e~~l~gm~~Ge~~~v~ 81 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQ---VIKGWDVGIPKLSVGEKARLT 81 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSS---SCHHHHHHGGGCCTTCEEEEE
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCC---ccHHHHHHHhCCCCCCEEEEE
Confidence 35688999999999666999999999999998 99999973 7899999887 999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCceeeeeeccc
Q psy4385 220 VQPQHLWSGKGNDKLGVPSNKPATYTITMNNF 251 (473)
Q Consensus 220 i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~ 251 (473)
++|.++||..+... .||+++.+.|+++|.++
T Consensus 82 ip~~~ayG~~~~~~-~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 82 IPGPYAYGPRGFPG-LIPPNSTLVFDVELLKV 112 (113)
T ss_dssp ECGGGTTTTTCBTT-TBCTTCCEEEEEEEEEE
T ss_pred ECHHHCcCCCCCCC-CcCCCCeEEEEEEEEEe
Confidence 99999999987654 49999999999998765
No 59
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.61 E-value=4.7e-15 Score=123.22 Aligned_cols=105 Identities=25% Similarity=0.504 Sum_probs=94.8
Q ss_pred CCCCceEEEEecC-CC-cCCCCCCCeEEEEEEeee--CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcE
Q psy4385 145 HDGGIRREILEEG-AS-FSTPKDGANVEITLKGEC--EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEK 215 (473)
Q Consensus 145 ~d~~i~k~i~~~g-~g-~~~p~~~~~v~~~~~g~~--~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~ 215 (473)
.++.+.++++++| .| ...|..++.|++||.|++ +|++|++. +++|.+|.+. +++||+.+|..|+.||+
T Consensus 14 ~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~---~i~g~e~~l~gm~~Ge~ 90 (129)
T 2vn1_A 14 ADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGE---VIKGWDICVSSMRKNEK 90 (129)
T ss_dssp TTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSS---SCHHHHHHHTTCCTTCE
T ss_pred CCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCC---cCHHHHHHHhCCCCCCE
Confidence 6788889999988 66 589999999999999998 89999973 7899999887 99999999999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCCCCCCCceeeeeeccccc
Q psy4385 216 SRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEK 253 (473)
Q Consensus 216 ~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~ 253 (473)
+.|.++|.++||..+... .||+++.+.|++.|.++..
T Consensus 91 ~~v~ip~~~aYG~~~~~~-~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 91 CLVRIESMYGYGDEGCGE-SIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEEECGGGTTTTTCBTT-TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEChHHcCCCCCCCC-CcCCCCeEEEEEEEEEEec
Confidence 999999999999987653 4999999999999988754
No 60
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.61 E-value=4.9e-15 Score=121.07 Aligned_cols=104 Identities=19% Similarity=0.320 Sum_probs=94.6
Q ss_pred CCCCceEEEEecCCCc-CCCCCCCeEEEEEEeee-CCeEEEe-ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEec
Q psy4385 145 HDGGIRREILEEGASF-STPKDGANVEITLKGEC-EGKVFQE-GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQ 221 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~-~~p~~~~~v~~~~~g~~-~g~~~~~-~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~ 221 (473)
.++.+.++++++|+|. ..|..++.|++||.+++ +|++|++ .++.|.+|.+. +++||+.+|..|+.||++.+.+|
T Consensus 11 ~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~~p~~f~lG~~~---~i~g~e~~l~gm~~Ge~~~~~ip 87 (118)
T 2awg_A 11 GNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCD---VIQALDLSVPLMDVGETAMVTAD 87 (118)
T ss_dssp SSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEEEEEEEETTSSC---SCHHHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECCCCEEEEECCCC---hhHHHHHHHhCCCCCCEEEEEEC
Confidence 6778999999999984 48999999999999998 9999998 48999999887 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeeeecccc
Q psy4385 222 PQHLWSGKGNDKLGVPSNKPATYTITMNNFE 252 (473)
Q Consensus 222 ~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~ 252 (473)
|.++||..+.. ..||+++.+.|++.|.++.
T Consensus 88 ~~~ayG~~~~~-~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 88 SKYCYGPQGRS-PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp GGGTTTTTCBT-TTBCTTCCEEEEEEEEEEE
T ss_pred hHHccCCCCCC-CccCCCCeEEEEEEEEEec
Confidence 99999988765 3599999999999998753
No 61
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.61 E-value=1.8e-15 Score=126.54 Aligned_cols=119 Identities=27% Similarity=0.415 Sum_probs=108.7
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|++|+..|++++ .+.|.+..+++++|.|++.+++|+.|+.++++++++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al---------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAI---------------TRNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHH---------------hhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999 555666889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN-----NKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~-----~~~~~~~l~~~~~~~~~ 401 (473)
+|+++.+++++|.+|..+|++++|+..|++++.++|+ +..+...+..+..+...
T Consensus 73 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 73 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 77788888777665533
No 62
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.61 E-value=3.3e-15 Score=159.44 Aligned_cols=121 Identities=22% Similarity=0.272 Sum_probs=67.6
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
+.+.++.++|+.+.++|+|++|+..|++|+ +++|.+..+|+|+|.++.++|++++|+.+|++|++
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl---------------~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~ 71 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKAL---------------EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR 71 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456666666666666666666666666666 33334445555555555555555555555555555
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQ 402 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 402 (473)
++|+++.+|+++|.+|..+|++++|+..|++|++++|++..++..|+.++..+++.
T Consensus 72 l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~ 127 (723)
T 4gyw_A 72 ISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 127 (723)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 55555555555555555555555555555555555555555555555555444433
No 63
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.3e-15 Score=125.92 Aligned_cols=111 Identities=19% Similarity=0.290 Sum_probs=99.2
Q ss_pred CCCCceEEEEecCCCc-CCCCCCCeEEEEEEeee-CCeEEEe-ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEec
Q psy4385 145 HDGGIRREILEEGASF-STPKDGANVEITLKGEC-EGKVFQE-GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQ 221 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~-~~p~~~~~v~~~~~g~~-~g~~~~~-~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~ 221 (473)
.++.+.++++++|.|. ..|..++.|++||.|++ +|++|++ .++.|.+|.+. +++||+.+|..|+.||++.+.+|
T Consensus 15 ~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~~p~~f~lG~g~---~i~G~e~~L~gm~~Ge~~~v~ip 91 (135)
T 2d9f_A 15 GNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCD---VIQALDLSVPLMDVGETAMVTAD 91 (135)
T ss_dssp SSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEEEEEEEETTSCC---SCTTTTTTGGGSCTTCEEEEEEC
T ss_pred CCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecCCCEEEEeCCCC---hhHHHHHHHhCCCCCCEEEEEEC
Confidence 6777999999999984 58999999999999998 9999998 48999999887 99999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeeeecccccccccc
Q psy4385 222 PQHLWSGKGNDKLGVPSNKPATYTITMNNFEKIKDTW 258 (473)
Q Consensus 222 ~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~~~~~ 258 (473)
|.++||..+.....||+++.+.|++.|.++....+.-
T Consensus 92 ~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~~e 128 (135)
T 2d9f_A 92 SKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPDLE 128 (135)
T ss_dssp HHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCSSS
T ss_pred hhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCchh
Confidence 9999999884445799999999999999987754443
No 64
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.60 E-value=2.6e-15 Score=135.27 Aligned_cols=70 Identities=33% Similarity=0.527 Sum_probs=65.5
Q ss_pred CCCCCEEEEEEEEEecCCCEEeccCCC-------------CccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCc
Q psy4385 46 PSAGCKVKVHYTGTLLDGTVFDSSKTR-------------GEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAY 112 (473)
Q Consensus 46 ~~~gd~V~v~y~~~~~dg~~~~st~~~-------------~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ay 112 (473)
++.||.|+|||++++ ||++||+|+.. +.|+.|.+|.++++|||++||.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCC
Q psy4385 113 GKQG 116 (473)
Q Consensus 113 g~~g 116 (473)
|+.+
T Consensus 81 Ge~~ 84 (231)
T 3prb_A 81 GKRD 84 (231)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9865
No 65
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.60 E-value=1.1e-14 Score=120.82 Aligned_cols=98 Identities=19% Similarity=0.464 Sum_probs=88.4
Q ss_pred eEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEe-----ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCC
Q psy4385 150 RREILEEGASFSTPKDGANVEITLKGEC-EGKVFQE-----GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQ 223 (473)
Q Consensus 150 ~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~-----~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~ 223 (473)
.|+++++|+|...|..++.|+++|.|++ +|++|++ .++.|.+|.+. +++||+.+|..|+.||++.+.++|.
T Consensus 27 ~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~---vi~G~e~aL~gm~~Ge~~~v~ip~~ 103 (130)
T 2lgo_A 27 EKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGE---VIKGWDQGVATMTLGEKALFTIPYQ 103 (130)
T ss_dssp CEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTT---SCHHHHHHHHHSCTTEEEEEEECTT
T ss_pred EEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCC---ccHHHHHHHhCCCCCCEEEEEECcH
Confidence 3459999999766999999999999998 9999997 37899999887 9999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCceeeeeeccc
Q psy4385 224 HLWSGKGNDKLGVPSNKPATYTITMNNF 251 (473)
Q Consensus 224 ~~~~~~g~~~~~ip~~~~~~y~i~L~~~ 251 (473)
++||..+... .||+++.+.|+++|.++
T Consensus 104 ~aYG~~~~~~-~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 104 LAYGERGYPP-VIPPKATLVFEVELLAV 130 (130)
T ss_dssp TSTTTTCCST-TSCSSCCEEEEEEEEEC
T ss_pred HHCCCCCCCC-CcCCCCeEEEEEEEEEC
Confidence 9999988754 49999999999998753
No 66
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.60 E-value=1.8e-15 Score=128.72 Aligned_cols=83 Identities=29% Similarity=0.470 Sum_probs=74.7
Q ss_pred CCCCCEEEEEEEEEecCCCEEeccCCC-------------CccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCc
Q psy4385 46 PSAGCKVKVHYTGTLLDGTVFDSSKTR-------------GEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAY 112 (473)
Q Consensus 46 ~~~gd~V~v~y~~~~~dg~~~~st~~~-------------~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ay 112 (473)
++.||.|+|||++++ ||++||+|+.. +.|+.|.+|.++++|||++||.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 678999999999999 99999999752 3699999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCceEEEEEEEeee
Q psy4385 113 GKQGSPPTIPPDSTLVFEVEMISWE 137 (473)
Q Consensus 113 g~~g~~~~ip~~~~l~~~v~l~~~~ 137 (473)
|+ .+..++..+....|.
T Consensus 81 G~--------~~~~~V~~v~~~~f~ 97 (157)
T 3pr9_A 81 GK--------RDPSKIKLIPLSEFT 97 (157)
T ss_dssp CC--------CCGGGEEEEEHHHHH
T ss_pred CC--------CChHhEEEcCHHHCC
Confidence 99 456777777776665
No 67
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.59 E-value=4.6e-15 Score=123.85 Aligned_cols=103 Identities=21% Similarity=0.319 Sum_probs=90.4
Q ss_pred CCCCceEEEEecCCCcCCCCCCCeEEEEEEeee--CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEE
Q psy4385 145 HDGGIRREILEEGASFSTPKDGANVEITLKGEC--EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSR 217 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~--~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~ 217 (473)
.++++.++++++|.|. .|..++.|++||.|++ +|++|++. ++.|.+|.+. +++||+.||..|++||++.
T Consensus 24 ~~~gl~~~vl~~G~g~-~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~---~i~G~e~aL~gm~~Ge~~~ 99 (134)
T 3b7x_A 24 GDRGVLKDVIREGAGD-LVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDI---TLWGMELGLLSMRRGELAR 99 (134)
T ss_dssp SSSSEEEEEEECCEEE-ECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCC---CCHHHHHHHHTCEETCEEE
T ss_pred CCCCEEEEEEEcCCCC-CCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcc---hhHHHHHHHhCCCCCCEEE
Confidence 6788999999999984 6778999999999998 59999873 6899999987 9999999999999999999
Q ss_pred EEecCCCCCCCCCCCCCCCCCCCCceeeeeecccc
Q psy4385 218 LFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFE 252 (473)
Q Consensus 218 ~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~ 252 (473)
|.+||.++||..+... .||+++.+.|+++|.++.
T Consensus 100 v~ip~~~aYG~~~~~~-~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 100 FLFKPNYAYGTLGCPP-LIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp EEECGGGTTTTTCBTT-TBCTTCCEEEEEEEEEEC
T ss_pred EEECHHHCcCCCCCCC-CcCcCCeEEEEEEEEEEe
Confidence 9999999999988754 499999999999998764
No 68
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.59 E-value=1.6e-14 Score=124.50 Aligned_cols=112 Identities=16% Similarity=0.294 Sum_probs=96.4
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEE
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLF 219 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~ 219 (473)
+.++.++++++|.|...|..++.|+|||.|++ +|++|++. |++|.+| . +++||+.+|..|+.|++..|.
T Consensus 36 ~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~---vI~G~eeaL~gMk~Ge~~~~~ 110 (167)
T 1jvw_A 36 PSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--E---VIKGWTEALQLMREGDRWRLF 110 (167)
T ss_dssp TTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--G---SCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--c---hhHHHHHHHcCCCCCCEEEEE
Confidence 45789999999998555999999999999998 99999983 7888885 3 999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCceeeeeeccccccccccccCchhH
Q psy4385 220 VQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEKIKDTWQLNSDEK 265 (473)
Q Consensus 220 i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~~~~~~~~~~~~~ 265 (473)
|||.++||..+.. ..||+++.+.|++.|.++.+. .+.++.++.
T Consensus 111 Ip~~laYG~~g~~-~~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~ 153 (167)
T 1jvw_A 111 IPYDLAYGVTGGG-GMIPPYSPLEFDVELISIKDG--GKGRTAEEV 153 (167)
T ss_dssp ECGGGTTTTTCSS-SSSCTTCCEEEEEEEEEEGGG--CCSCBHHHH
T ss_pred ECchhhCCCCCCC-CCcCCCCeEEEEEEEEEEEcC--CCCCCHHHH
Confidence 9999999998864 359999999999999998753 344555543
No 69
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.58 E-value=1.9e-15 Score=161.41 Aligned_cols=141 Identities=17% Similarity=0.144 Sum_probs=125.8
Q ss_pred ccccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 251 FEKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK 330 (473)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k 330 (473)
++++...+....+..+..+..+.++|+.+.+.|++++|+..|++|+ +++|.++.+|+|+|.++..
T Consensus 25 ~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al---------------~l~P~~~~a~~nLg~~l~~ 89 (723)
T 4gyw_A 25 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI---------------RISPTFADAYSNMGNTLKE 89 (723)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHH
Confidence 4444444544555566778899999999999999999999999999 6777789999999999999
Q ss_pred cCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy4385 331 LKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKE 406 (473)
Q Consensus 331 l~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 406 (473)
+|++++|+..|++|++++|+++.+|+++|.+|..+|++++|+..|++|++++|++..++..|+.++..+.+..++.
T Consensus 90 ~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~ 165 (723)
T 4gyw_A 90 MQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYD 165 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988776655443
No 70
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.58 E-value=9.7e-15 Score=124.01 Aligned_cols=83 Identities=25% Similarity=0.336 Sum_probs=76.1
Q ss_pred CCCCCCEEEEEEEEEec-CCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCC
Q psy4385 45 TPSAGCKVKVHYTGTLL-DGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPP 123 (473)
Q Consensus 45 ~~~~gd~V~v~y~~~~~-dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~ 123 (473)
.++.||.|++||++++. ||++|++|+. +.|+.|.+|.++++|||+++|.+|++|++++|.|||+.|||+ .
T Consensus 6 ~i~~gd~V~v~Y~g~~~~dG~~fdss~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~--------~ 76 (151)
T 2kr7_A 6 LESIKQAALIEYEVREQGSSIVLDSNIS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGV--------Y 76 (151)
T ss_dssp CTTSCCEEEEEEEEEESSCSCEEEESTT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCS--------S
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEeCCC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCC--------C
Confidence 57899999999999998 9999999975 369999999999999999999999999999999999999998 4
Q ss_pred CCceEEEEEEEee
Q psy4385 124 DSTLVFEVEMISW 136 (473)
Q Consensus 124 ~~~l~~~v~l~~~ 136 (473)
+..+++.|....|
T Consensus 77 ~~~~v~~v~~~~f 89 (151)
T 2kr7_A 77 ESSYLQEVPRDQF 89 (151)
T ss_dssp CSCEEEEEEGGGG
T ss_pred CcceEEEEcHHHc
Confidence 5678888888777
No 71
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.58 E-value=4.2e-15 Score=130.96 Aligned_cols=83 Identities=20% Similarity=0.291 Sum_probs=75.0
Q ss_pred CCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCCC
Q psy4385 46 PSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPDS 125 (473)
Q Consensus 46 ~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~~ 125 (473)
++.||.|+|||++++.||++|++|+.. .|+.|.+|.++++|||+++|.+|++|++++|.|||+.|||+ .+.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe--------~~~ 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ--------YDE 73 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSC--------CCT
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCC--------CCh
Confidence 678999999999999899999999754 69999999999999999999999999999999999999998 456
Q ss_pred ceEEEEEEEeee
Q psy4385 126 TLVFEVEMISWE 137 (473)
Q Consensus 126 ~l~~~v~l~~~~ 137 (473)
.+++.|.+..|.
T Consensus 74 ~lV~~vp~~~f~ 85 (196)
T 2kfw_A 74 NLVQRVPKDVFM 85 (196)
T ss_dssp TTCEEECGGGCC
T ss_pred hhEEEEEHHHCC
Confidence 677777776664
No 72
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.58 E-value=1.5e-14 Score=119.49 Aligned_cols=104 Identities=17% Similarity=0.337 Sum_probs=94.2
Q ss_pred CCCCceEEEEecCCC-cCCCCCCCeEEEEEEeee--CCeEEEec-------eeeEEeCCCcccCCcHHHHHHHHhcccCc
Q psy4385 145 HDGGIRREILEEGAS-FSTPKDGANVEITLKGEC--EGKVFQEG-------TFSFVLGEGSEYDIPENLEKALEKFKYKE 214 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g-~~~p~~~~~v~~~~~g~~--~g~~~~~~-------~~~~~lg~~~~~~~~~gle~al~~m~~gE 214 (473)
.+.++.++++++|.+ ...|..++.|++||.|++ +|++|++. ++.|.+|.+. +++||+.+|..|+.||
T Consensus 10 ~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~---~i~G~e~~l~gm~~Ge 86 (125)
T 4dip_A 10 PEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILE---ALKGWDQGLKGMCVGE 86 (125)
T ss_dssp CCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCS---SCHHHHHHSTTCCTTC
T ss_pred CCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCC---hhHHHHHHHhCCCCCC
Confidence 456789999999973 589999999999999998 89999973 6899999887 9999999999999999
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCCCCCceeeeeeccccc
Q psy4385 215 KSRLFVQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEK 253 (473)
Q Consensus 215 ~~~~~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~ 253 (473)
++.+.++|.++||..+.. .||+++.+.|+++|.++.+
T Consensus 87 ~~~~~ip~~~aYG~~g~~--~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 87 KRKLIIPPALGYGKEGKG--KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp EEEEEECGGGTTTTTCBT--TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHhcCCCCCC--CCCCCCeEEEEEEEEEEEc
Confidence 999999999999999865 7999999999999998765
No 73
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.58 E-value=1.4e-14 Score=120.53 Aligned_cols=101 Identities=24% Similarity=0.503 Sum_probs=92.1
Q ss_pred CCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEE
Q psy4385 145 HDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRL 218 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~ 218 (473)
.+.++.++++++|.| ..|..++.|++||.|++ +|++|++. ++.|.+|.+. +++||+.+|..|+.||++.|
T Consensus 26 ~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~---vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 26 TESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGM---VIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp CTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSS---SCHHHHHHSTTCBTTCEEEE
T ss_pred CCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCC---hhHHHHHHHcCCCCCCEEEE
Confidence 456789999999998 68999999999999999 99999973 7899999887 99999999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCceeeeeecc
Q psy4385 219 FVQPQHLWSGKGNDKLGVPSNKPATYTITMNN 250 (473)
Q Consensus 219 ~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~ 250 (473)
.++|.++||..+... .|||++.+.|+++|.+
T Consensus 102 ~ip~~~aYG~~~~~~-~Ipp~~~l~f~VeL~~ 132 (133)
T 2y78_A 102 TIPPQLGYGARGAGG-VIPPNATLVFEVELLD 132 (133)
T ss_dssp EECGGGTTTTTCBTT-TBCTTCCEEEEEEEEE
T ss_pred EECcHHhCCCCCCCC-CCCCCCeEEEEEEEEE
Confidence 999999999988653 5999999999999865
No 74
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.57 E-value=9.1e-16 Score=130.38 Aligned_cols=84 Identities=31% Similarity=0.564 Sum_probs=76.1
Q ss_pred CCCCCEEEEEEEEEecCCCEEeccCC-------------CCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCc
Q psy4385 46 PSAGCKVKVHYTGTLLDGTVFDSSKT-------------RGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAY 112 (473)
Q Consensus 46 ~~~gd~V~v~y~~~~~dg~~~~st~~-------------~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ay 112 (473)
++.||.|++||++++.||++|++|+. ...|+.|.+|.++++|||+++|.+|++|++++|.|||+.||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 67899999999999999999999973 33699999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCceEEEEEEEeee
Q psy4385 113 GKQGSPPTIPPDSTLVFEVEMISWE 137 (473)
Q Consensus 113 g~~g~~~~ip~~~~l~~~v~l~~~~ 137 (473)
|+ .+..+++.|.+..|.
T Consensus 82 G~--------~~~~~v~~v~~~~f~ 98 (151)
T 1ix5_A 82 GN--------RNEMLIQKIPRDAFK 98 (151)
T ss_dssp CS--------CCSTTBCCEETHHHH
T ss_pred CC--------CCccEEEEEEHHHcC
Confidence 98 456788888888775
No 75
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.57 E-value=2.9e-14 Score=123.12 Aligned_cols=83 Identities=20% Similarity=0.291 Sum_probs=75.0
Q ss_pred CCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCCC
Q psy4385 46 PSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPDS 125 (473)
Q Consensus 46 ~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~~ 125 (473)
++.||.|+|+|++++.||++|++|+.. .|+.|.+|.++++|||+++|.+|++|++++|.|||+.|||+ .+.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~--------~~~ 73 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ--------YDE 73 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCC--------CCT
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCC--------CCh
Confidence 678999999999999899999999753 69999999999999999999999999999999999999998 456
Q ss_pred ceEEEEEEEeee
Q psy4385 126 TLVFEVEMISWE 137 (473)
Q Consensus 126 ~l~~~v~l~~~~ 137 (473)
.+++.|....|.
T Consensus 74 ~~v~~v~~~~f~ 85 (171)
T 2k8i_A 74 NLVQRVPKDVFM 85 (171)
T ss_dssp TSEEEEEGGGGT
T ss_pred hhEEEeeHHHCC
Confidence 677777777664
No 76
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.56 E-value=1.3e-14 Score=129.81 Aligned_cols=100 Identities=22% Similarity=0.373 Sum_probs=91.4
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEe--ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecC
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQE--GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQP 222 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~--~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~ 222 (473)
+.++.++++++|+| ..|..+++|+|||.|++ +|++||+ .|++|.+| . +++||+.+|..|++|++..+.|||
T Consensus 116 ~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss~~P~~f~lG--~---vI~G~eeaL~gMk~Gek~~v~IPp 189 (219)
T 3oe2_A 116 ADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQSTQPQWFRLD--S---VISGWTSALQNMPTGAKWRLVIPS 189 (219)
T ss_dssp GGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEECSSCEEEEGG--G---SCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeeccCCcEEEEec--c---hhHHHHHHHhCCCCCCEEEEEECc
Confidence 46789999999998 68999999999999998 9999997 48899998 3 999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCceeeeeecccc
Q psy4385 223 QHLWSGKGNDKLGVPSNKPATYTITMNNFE 252 (473)
Q Consensus 223 ~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~ 252 (473)
.++||..+... .|||++.+.|+++|.++.
T Consensus 190 ~lAYG~~g~~~-~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 190 DQAYGAEGAGD-LIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GGTTTTTCBTT-TBCTTCCEEEEEEEEEEE
T ss_pred hhcCCCCCCCC-CCCCCCeEEEEEEEEEEe
Confidence 99999998753 599999999999998764
No 77
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.56 E-value=3.4e-14 Score=114.48 Aligned_cols=114 Identities=23% Similarity=0.251 Sum_probs=106.0
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+...|..++..|+|.+|+..|++++ ...|....+++++|.++..++++++|+..+++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~---------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAI---------------KLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHH---------------HHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 46788899999999999999999999999 444556789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
+|.++.+++++|.++..+|++++|+..|+++++++|++..++..++.+.
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999988887765
No 78
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.55 E-value=5.9e-14 Score=115.20 Aligned_cols=124 Identities=32% Similarity=0.417 Sum_probs=112.2
Q ss_pred chhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQC 341 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~ 341 (473)
.......+..+..+|..++..|+|..|+..|++++ ...|....++.++|.++..++++++|+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~---------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 69 (131)
T 2vyi_A 5 SEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAI---------------ELNPANAVYFCNRAAAYSKLGNYAGAVQDC 69 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHH---------------HcCCCCHHHHHHHHHHHHHhhchHHHHHHH
Confidence 34456678899999999999999999999999999 444556789999999999999999999999
Q ss_pred HHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4385 342 DKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLR 400 (473)
Q Consensus 342 ~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 400 (473)
.+++.++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+...++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 70 ERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLR 128 (131)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988888876553
No 79
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.55 E-value=1.2e-13 Score=118.85 Aligned_cols=120 Identities=26% Similarity=0.407 Sum_probs=110.3
Q ss_pred chhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQC 341 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~ 341 (473)
.......+..+..+|..++..|+|..|+..|.+++ ...|....+++++|.++..+++|++|+..+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al---------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAI---------------ELNPSNAIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH---------------HhCCCChHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35567788999999999999999999999999999 445556889999999999999999999999
Q ss_pred HHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 342 DKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 342 ~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
.+++.++|.++.+++++|.++..+|++++|+..|++++.++|++..++..+..+.
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998887666663
No 80
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.55 E-value=1.7e-14 Score=131.44 Aligned_cols=119 Identities=15% Similarity=0.152 Sum_probs=70.0
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..++..|++++|+..|++++.. +|.++.+++++|.++.++|++++|+..++++++++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~ 69 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKE---------------NPQDPEALYWLARTQLKLGLVNPALENGKTLVART 69 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTT---------------SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 445666677777777777777777777733 33345555555555555555555555555555555
Q ss_pred CCCHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4385 349 PNNEKAFFRRGNAYLDL-----------NEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQ 402 (473)
Q Consensus 349 p~~~ka~~~~g~a~~~l-----------g~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 402 (473)
|+++.+++++|.++..+ |++++|+..|+++++++|++..++..++.+...+++.
T Consensus 70 P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~ 134 (217)
T 2pl2_A 70 PRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGER 134 (217)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCh
Confidence 55555555555555555 5555555555555555555555555555555444433
No 81
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.54 E-value=1.2e-14 Score=144.06 Aligned_cols=131 Identities=8% Similarity=-0.026 Sum_probs=110.5
Q ss_pred cccccccCchhHHHhhHHHHhhcchhhhccc-HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC
Q psy4385 254 IKDTWQLNSDEKLEQGKLLKERGTTYFKQDK-FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK 332 (473)
Q Consensus 254 ~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~-~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~ 332 (473)
+...+.......+..+..+..+|..+...|+ |++|+..|++++ .++|.+..+|+++|.++.++|
T Consensus 116 Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al---------------~l~P~~~~a~~~~g~~~~~~g 180 (382)
T 2h6f_A 116 AFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAII---------------EEQPKNYQVWHHRRVLVEWLR 180 (382)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHH---------------HHCCCCHHHHHHHHHHHHHcc
Confidence 3333333444555667788888888888886 888888888888 667778889999999999999
Q ss_pred ChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 333 QAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 333 ~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
+|++|+.+|+++|+++|++..+|+++|.++..+|++++|+.+|+++++++|++..++..++.+...+
T Consensus 181 ~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l 247 (382)
T 2h6f_A 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNT 247 (382)
T ss_dssp CCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999998887773
No 82
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.53 E-value=2.2e-14 Score=130.66 Aligned_cols=138 Identities=17% Similarity=0.159 Sum_probs=122.7
Q ss_pred chhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHc----------
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKL---------- 331 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl---------- 331 (473)
....+..+..+..+|..++..|++++|+..|++++ .++|.+..+++++|.++..+
T Consensus 32 l~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al---------------~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~ 96 (217)
T 2pl2_A 32 LKENPQDPEALYWLARTQLKLGLVNPALENGKTLV---------------ARTPRYLGGYMVLSEAYVALYRQAEDRERG 96 (217)
T ss_dssp HTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCcHHHHHHHHHHHHHhhhhhhhhccc
Confidence 33444567789999999999999999999999999 66777899999999999999
Q ss_pred -CChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 332 -KQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVY 410 (473)
Q Consensus 332 -~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~ 410 (473)
|++++|+..++++++++|+++.+++++|.+|..+|++++|+..|+++++++ ++..++..++.+...+++..+. ...|
T Consensus 97 ~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A-~~~~ 174 (217)
T 2pl2_A 97 KGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEA-LAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHH-HHHH
T ss_pred ccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHH-HHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999888766655 3456
Q ss_pred HHHhhh
Q psy4385 411 ANMFDK 416 (473)
Q Consensus 411 ~~~f~~ 416 (473)
++++..
T Consensus 175 ~~al~~ 180 (217)
T 2pl2_A 175 AKALEQ 180 (217)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666543
No 83
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.53 E-value=1.8e-14 Score=118.51 Aligned_cols=102 Identities=11% Similarity=0.072 Sum_probs=90.8
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCC
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPN 350 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~ 350 (473)
.+..+|..++..|++.+|+..|++++ ..+|.+..+++++|.++..+|++++|+..++++++++|+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al---------------~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVC---------------QKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHH---------------HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 45678999999999999999999999 667778999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH
Q psy4385 351 NEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKA 387 (473)
Q Consensus 351 ~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~ 387 (473)
++.+++.+|.+|..+|++++|+..|+++++++|++..
T Consensus 84 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 84 DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999999999999998754
No 84
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.53 E-value=5.7e-14 Score=126.01 Aligned_cols=101 Identities=24% Similarity=0.502 Sum_probs=92.5
Q ss_pred CCCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEE
Q psy4385 145 HDGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRL 218 (473)
Q Consensus 145 ~d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~ 218 (473)
.+.++.++++++|+| ..|..++.|++||.|++ +|++|++. |+.|.+|.+. +++||+.||..|+.||++.+
T Consensus 102 ~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~---vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 102 TESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGM---VIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp CTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSS---SCHHHHHHHTTCBTTCEEEE
T ss_pred CCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCc---cchhHHHHHhCCCCCCEEEE
Confidence 456799999999998 55999999999999999 99999974 7999999987 99999999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCceeeeeecc
Q psy4385 219 FVQPQHLWSGKGNDKLGVPSNKPATYTITMNN 250 (473)
Q Consensus 219 ~i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~ 250 (473)
.+||.++||..+... .||+++.+.|+++|.+
T Consensus 178 ~Ipp~~aYG~~g~~~-~IP~~s~LvF~VeL~~ 208 (209)
T 3uf8_A 178 TIPPQLGYGARGAAG-VIPPNATLVFEVELLD 208 (209)
T ss_dssp EECGGGTTTTTCBTT-TBCTTCCEEEEEEEEE
T ss_pred EECcHHhCCCCCCCC-CcCCCCeEEEEEEEEE
Confidence 999999999998764 4999999999999875
No 85
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.52 E-value=3.9e-14 Score=117.06 Aligned_cols=118 Identities=24% Similarity=0.357 Sum_probs=108.3
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
.....+..+|..++..|+|.+|+..|++++... |.+..+++++|.++..++++++|+..+++++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 78 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN---------------PKDAKLYSNRAACYTKLLEFQLALKDCEECIQ 78 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC---------------TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC---------------CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 357789999999999999999999999999543 34477899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
++|.+..+++++|.++..+|++++|+..|++++.++|++..++..++.+...+
T Consensus 79 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred hCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998888887543
No 86
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=9.7e-14 Score=117.02 Aligned_cols=118 Identities=27% Similarity=0.385 Sum_probs=106.9
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+...|..++..|+|.+|+..|++++...+. .+....+++++|.+++.+++|++|+..|++++.
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT------------PQDQAVLHRNRAACHLKLEDYDKAETEASKAIE 93 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc------------chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 34678899999999999999999999999965442 123478999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
++|+++.+++++|.+|..+|++++|+..|++++.++|++..++..+..+.
T Consensus 94 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 94 KDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred hCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888777664
No 87
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.51 E-value=6.1e-14 Score=123.59 Aligned_cols=145 Identities=16% Similarity=0.167 Sum_probs=97.3
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCC------------Ch-------hHHHHHHHHHHHHHHHHHHHHH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGF------------EG-------EQETERKKTLTACHLNAAMCLL 329 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~------------~~-------~~~~~~~~~~~~~~~nla~~~~ 329 (473)
+..+.++|+.++..|+|++|+..|++++++.+..... .. .......+....++.++|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 3445555666666666666666666665433321100 00 0001334445667777777788
Q ss_pred HcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 330 KLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQV 409 (473)
Q Consensus 330 kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~ 409 (473)
..++++.|+..+.+++.++|.+..+++.+|.+|..+|+|++|+..|+++++++|++..++..++.+...+++..++. ..
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~-~~ 163 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAV-KY 163 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHH-HH
Confidence 88888888888888888888888888888888888888888888888888888888888888888887776655443 34
Q ss_pred HHHHh
Q psy4385 410 YANMF 414 (473)
Q Consensus 410 ~~~~f 414 (473)
|++.+
T Consensus 164 ~~~al 168 (184)
T 3vtx_A 164 FKKAL 168 (184)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 88
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.51 E-value=2.8e-14 Score=121.20 Aligned_cols=103 Identities=21% Similarity=0.271 Sum_probs=93.5
Q ss_pred hhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChh----------HHHHHHHHHhhhCC
Q psy4385 280 FKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAK----------PAKDQCDKAIELEP 349 (473)
Q Consensus 280 ~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~----------~A~~~~~~al~~~p 349 (473)
-+.+.|++|+..|++++ +++|.++.+|+|+|.+++.+++++ +|+..|++||+++|
T Consensus 13 ~r~~~feeA~~~~~~Ai---------------~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP 77 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTY---------------KSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDP 77 (158)
T ss_dssp HHHHHHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHhHHHHHHHHHHHHH---------------HHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCc
Confidence 35678999999999999 778888999999999999998764 99999999999999
Q ss_pred CCHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 350 NNEKAFFRRGNAYLDLN-----------EPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~lg-----------~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
++..+||++|.+|..+| +|++|+.+|++|++++|++...+..+..+.+
T Consensus 78 ~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~k 136 (158)
T 1zu2_A 78 KKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAK 136 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 99999999999999885 8999999999999999999887777666543
No 89
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.51 E-value=4.1e-14 Score=140.13 Aligned_cols=134 Identities=16% Similarity=0.091 Sum_probs=120.7
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQ-AKPAKDQCDK 343 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~-~~~A~~~~~~ 343 (473)
.+..+..+..+|..+...|+|++|+..|+++| .++|.+..+|+++|.++..+|+ +++|+.+|++
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al---------------~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~ 157 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAI---------------ELNAANYTVWHFRRVLLKSLQKDLHEEMNYITA 157 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHH---------------HhCccCHHHHHHHHHHHHHcccCHHHHHHHHHH
Confidence 34568889999999999999999999999999 7778889999999999999997 9999999999
Q ss_pred HhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 344 AIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 344 al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
+|+++|++..+|+++|.++..+|++++|+.+|++|++++|++..++..++.+...+++..++ ...|.+++
T Consensus 158 al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eA-l~~~~~al 227 (382)
T 2h6f_A 158 IIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNE-LQYVDQLL 227 (382)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTH-HHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887665433 33444443
No 90
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.51 E-value=1.4e-13 Score=125.73 Aligned_cols=122 Identities=20% Similarity=0.238 Sum_probs=106.5
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+...|..++..|+|.+|+..|++++...+. ....+++++|.|+..+|+|++|+.+|+++++++
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNN--------------QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT--------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCC--------------CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 367889999999999999999999999954430 345788899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHH
Q psy4385 349 PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK-------AAVQKLTQTKQKLREQKI 404 (473)
Q Consensus 349 p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~-------~~~~~l~~~~~~~~~~~~ 404 (473)
|+++.+++++|.+|..+|++++|+..|+++++++|++. .++..++.+...+++..+
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 135 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEK 135 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHH
Confidence 99999999999999999999999999999999999999 446666666655544443
No 91
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.50 E-value=3e-14 Score=121.99 Aligned_cols=105 Identities=9% Similarity=0.003 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q psy4385 312 ERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQK 391 (473)
Q Consensus 312 ~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 391 (473)
.++|.+..+++++|.+++++|+|++|+..|++++.++|+++.+|+++|.+|..+|+|++|+..|+++++++|+++.++..
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~ 109 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFH 109 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHH
Confidence 66788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy4385 392 LTQTKQKLREQKIKEKQVYANMFDKF 417 (473)
Q Consensus 392 l~~~~~~~~~~~~~~k~~~~~~f~~~ 417 (473)
++.++..+++..++. ..|++.....
T Consensus 110 lg~~~~~lg~~~eA~-~~~~~al~l~ 134 (151)
T 3gyz_A 110 TGQCQLRLKAPLKAK-ECFELVIQHS 134 (151)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHH-HHHHHHHHhC
Confidence 999999887766554 4566665543
No 92
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.50 E-value=2.9e-13 Score=119.22 Aligned_cols=132 Identities=14% Similarity=0.184 Sum_probs=100.6
Q ss_pred hcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHH
Q psy4385 275 RGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKA 354 (473)
Q Consensus 275 ~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka 354 (473)
....|+..|..-.....|.+|+..+.. ..+++|.++.++.++|.++.++|++++|+..+.+++..+|++..+
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~--------al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 75 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKK--------VLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEA 75 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHH--------HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH--------HHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHH
Confidence 345677777777777788888866542 335667778888888888888888888888888888888888888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 355 FFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 355 ~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
++.+|.++...++++.|...+.+++.++|++..++..++.+...+++..++. ..|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~-~~~~~~l~ 135 (184)
T 3vtx_A 76 YYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAI-EAYEKTIS 135 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHH-HHHHHHHH
Confidence 8888888888888888888888888888888888888888877776555443 34444443
No 93
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.50 E-value=1.4e-13 Score=113.07 Aligned_cols=118 Identities=27% Similarity=0.352 Sum_probs=106.6
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|..|+..|.+++. ..|....+++++|.++..+++|++|+.++.+++.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~---------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKE---------------LDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh---------------cCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 467888999999999999999999999994 44556789999999999999999999999999999
Q ss_pred CCCC-------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4385 348 EPNN-------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 348 ~p~~-------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 401 (473)
+|.+ ..+++++|.+|..+|++++|+..|++++.+.| +..+...+..+...+++
T Consensus 68 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 68 GRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 9887 89999999999999999999999999999999 58888888888766543
No 94
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.50 E-value=7.1e-14 Score=115.95 Aligned_cols=102 Identities=17% Similarity=0.273 Sum_probs=91.0
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEe-----ceeeEEeCCCcccCCcHHHHHHHHh------cccC
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQE-----GTFSFVLGEGSEYDIPENLEKALEK------FKYK 213 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~-----~~~~~~lg~~~~~~~~~gle~al~~------m~~g 213 (473)
+.++.++++++|.| ..|..++.|++||.|++ +|++|++ .++.|.+|.+. +++||+.+|.. |+.|
T Consensus 11 ~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~---~i~G~~~~L~G~~~~~~m~~G 86 (129)
T 1u79_A 11 PSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGE---VIKGWDQGILGSDGIPPMLTG 86 (129)
T ss_dssp TTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSS---SCHHHHHHHHCBTTBCCCBTT
T ss_pred CCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCC---ccHHHHHHhcccccccccCCC
Confidence 45689999999998 67999999999999998 9999997 37899999887 99999999988 9999
Q ss_pred cEEEEEecCCCCCCCCCCC----CCCCCCCCCceeeeeeccc
Q psy4385 214 EKSRLFVQPQHLWSGKGND----KLGVPSNKPATYTITMNNF 251 (473)
Q Consensus 214 E~~~~~i~~~~~~~~~g~~----~~~ip~~~~~~y~i~L~~~ 251 (473)
|++.+.++|.++||..+.. ...||+++.+.|+++|.++
T Consensus 87 e~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 87 GKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp CEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999999999988753 2359999999999998764
No 95
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.49 E-value=1.5e-13 Score=122.98 Aligned_cols=101 Identities=15% Similarity=0.318 Sum_probs=90.8
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEE
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLF 219 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~ 219 (473)
+.++..+++++|+| ..|..++.|+|||.|++ +|++||+. |++|.+| . +++||+.+|..|+.|++..|.
T Consensus 105 ~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~---vI~G~eeaL~gMk~Gek~~v~ 178 (213)
T 1fd9_A 105 PSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--Q---VIPGWTEALQLMPAGSTWEIY 178 (213)
T ss_dssp TTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--G---SCHHHHHHHTTCCTTCEEEEE
T ss_pred CCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--c---hhhHHHHHHcCCCCCCEEEEE
Confidence 45789999999998 78999999999999998 99999973 7889885 3 999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCceeeeeeccccc
Q psy4385 220 VQPQHLWSGKGNDKLGVPSNKPATYTITMNNFEK 253 (473)
Q Consensus 220 i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~~~ 253 (473)
|||.++||..+.. ..||+++.+.|+++|.++.+
T Consensus 179 IP~~laYG~~g~~-~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 179 VPSGLAYGPRSVG-GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp ECGGGTTTTCCCS-SSCCTTCCEEEEEEEEEEEC
T ss_pred ECchhccCccCCC-CCCCCCCeEEEEEEEEEEEc
Confidence 9999999998863 36999999999999988754
No 96
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.49 E-value=3e-14 Score=121.51 Aligned_cols=78 Identities=21% Similarity=0.303 Sum_probs=72.8
Q ss_pred CCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCCC
Q psy4385 46 PSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPDS 125 (473)
Q Consensus 46 ~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~~ 125 (473)
++.||.|++||+++ .||++|++|+ +.|.+|.++++|||+++|.+|++|++++|.|||+.|||+ .+.
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~--------~~~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGP--------HDP 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCC--------CCG
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCC--------CCc
Confidence 67899999999999 8999999996 899999999999999999999999999999999999998 567
Q ss_pred ceEEEEEEEeee
Q psy4385 126 TLVFEVEMISWE 137 (473)
Q Consensus 126 ~l~~~v~l~~~~ 137 (473)
.+++.|.+..|.
T Consensus 69 ~lv~~v~~~~f~ 80 (158)
T 3cgm_A 69 EGVQVVPLSAFP 80 (158)
T ss_dssp GGEEEEEGGGSC
T ss_pred ceEEEEEHHHCC
Confidence 889999888875
No 97
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.49 E-value=1.7e-13 Score=125.13 Aligned_cols=120 Identities=13% Similarity=0.190 Sum_probs=110.4
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
....+..+|..++..|+|++|+..|++++ ..+|....++.++|.++..+|++++|+..+++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al---------------~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 105 (228)
T 4i17_A 41 DSVTAYNCGVCADNIKKYKEAADYFDIAI---------------KKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKA 105 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcHHHHHHHHHHHH---------------HhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 34577779999999999999999999999 556668899999999999999999999999999999
Q ss_pred CCCCH-------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHH
Q psy4385 348 EPNNE-------KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN--NKAAVQKLTQTKQKLREQ 402 (473)
Q Consensus 348 ~p~~~-------ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~~~~~ 402 (473)
+|++. .+|+++|.++..+|++++|+..|+++++++|+ +..++..++.+...++..
T Consensus 106 ~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 106 VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999 77999999999999999999999999999999 999999999998766554
No 98
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.48 E-value=1.6e-13 Score=113.14 Aligned_cols=115 Identities=11% Similarity=0.070 Sum_probs=101.0
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCC
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPN 350 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~ 350 (473)
.+..+|..++..|+|.+|+..|++++...+.. +....+++++|.|++++|+|++|+..+++++..+|+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~------------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~ 71 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNG------------VYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT 71 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCC------------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC
Confidence 46778999999999999999999999655431 122378999999999999999999999999999999
Q ss_pred C---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 351 N---EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 351 ~---~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
+ +.+++++|.+|..+|++++|+..|++++...|++..+...+..+..
T Consensus 72 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 72 HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 9 8999999999999999999999999999999999887766655543
No 99
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.48 E-value=2.6e-13 Score=112.40 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q psy4385 312 ERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQK 391 (473)
Q Consensus 312 ~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 391 (473)
.++|..+..+.++|.++++.|+|++|+..|+++++++|.++.+|+++|.+|..+|++++|+.+|+++++++|++..++..
T Consensus 7 ~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 86 (126)
T 4gco_A 7 YINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIR 86 (126)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 392 LTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 392 l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
++.+...+++..++. ..|++.+.
T Consensus 87 lg~~~~~~~~~~~A~-~~~~~al~ 109 (126)
T 4gco_A 87 KAACLVAMREWSKAQ-RAYEDALQ 109 (126)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHHHHCCCHHHHH-HHHHHHHH
Confidence 999999887766544 35555554
No 100
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.48 E-value=2.1e-13 Score=122.97 Aligned_cols=98 Identities=24% Similarity=0.504 Sum_probs=88.7
Q ss_pred CCCceEEEEecCCCcCCCCCCCeEEEEEEeee-CCeEEEec-----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEE
Q psy4385 146 DGGIRREILEEGASFSTPKDGANVEITLKGEC-EGKVFQEG-----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLF 219 (473)
Q Consensus 146 d~~i~k~i~~~g~g~~~p~~~~~v~~~~~g~~-~g~~~~~~-----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~ 219 (473)
+.++..+++++|.| ..|..++.|+|||.|++ +|++||+. |++|.+| . +++||+.+|..|++|++..|.
T Consensus 120 ~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~---vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 120 STGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--G---VIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp TTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--G---SCHHHHHHGGGSCTTCEEEEE
T ss_pred CCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--C---cchhHHHHHcCCCCCCEEEEE
Confidence 45688999999998 58999999999999998 99999984 7888885 3 999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCceeeeeeccc
Q psy4385 220 VQPQHLWSGKGNDKLGVPSNKPATYTITMNNF 251 (473)
Q Consensus 220 i~~~~~~~~~g~~~~~ip~~~~~~y~i~L~~~ 251 (473)
|||.++||..+.+ +||+++.+.|+++|.++
T Consensus 194 IP~~laYG~~g~~--~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 194 IPPELAYGKAGVP--GIPPNSTLVFDVELLDV 223 (224)
T ss_dssp ECGGGTTTTTCBT--TBCTTCCEEEEEEEEEE
T ss_pred ECchhhcCcCCCC--CCCCCCEEEEEEEEEEe
Confidence 9999999998875 39999999999998765
No 101
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.47 E-value=1.3e-13 Score=112.40 Aligned_cols=99 Identities=16% Similarity=0.108 Sum_probs=85.9
Q ss_pred hcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHH
Q psy4385 281 KQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGN 360 (473)
Q Consensus 281 ~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~ 360 (473)
..|+|++|+..|++++..... +|....+++++|.+++.+|+|++|+..++++++++|+++.+++++|.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQ------------GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHSSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCC------------CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 368899999999999932100 57789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q psy4385 361 AYLDLNEPELAEKDFQKVLQIDPNNKAAVQK 391 (473)
Q Consensus 361 a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 391 (473)
++..+|++++|+..|++++.++|+++.+...
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 100 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAETSDDETIQSY 100 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHCCCHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 9999999999999999999999999876543
No 102
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.46 E-value=2.5e-13 Score=122.81 Aligned_cols=90 Identities=24% Similarity=0.268 Sum_probs=76.6
Q ss_pred hcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHH
Q psy4385 275 RGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKA 354 (473)
Q Consensus 275 ~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka 354 (473)
+|..++..|+|++|+..|++++ .++|.+..+++++|.++..+|++++|+.+|+++++++|+++.+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a 124 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELL---------------QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAA 124 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHH---------------HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999999999999999 6677789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC--HHHHHHHHHHHH
Q psy4385 355 FFRRGNAYLDLNE--PELAEKDFQKVL 379 (473)
Q Consensus 355 ~~~~g~a~~~lg~--~~~A~~~~~~al 379 (473)
|+++|.+|+..++ .+.|...+.+++
T Consensus 125 ~~~lg~~~~~~~~~~~~~~~~~~~~~~ 151 (208)
T 3urz_A 125 NIFLGNYYYLTAEQEKKKLETDYKKLS 151 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 9999988866543 333444555444
No 103
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.45 E-value=3.3e-13 Score=128.03 Aligned_cols=103 Identities=28% Similarity=0.464 Sum_probs=97.5
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..++.+|+.++..|+|.+|+..|++++ .+.|.+..+++++|.|++++|+|++|+.+|++++++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAI---------------TRNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 36688999999999999999999999999 555667889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN 385 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~ 385 (473)
+|+++++++++|.+|..+|++++|+..|+++++++|++
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999976
No 104
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.44 E-value=2.9e-13 Score=138.27 Aligned_cols=116 Identities=25% Similarity=0.401 Sum_probs=108.6
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
+.+..+..+|+.++..|+|++|+..|++|+ +++|....+++++|.+++++++|++|+.+|++|++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al---------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAI---------------ELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHH---------------HhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456778899999999999999999999999 55666789999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
++|+++.+++++|.+|..+|++++|+..|++|++++|++..++..++.+..
T Consensus 69 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~ 119 (477)
T 1wao_1 69 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 119 (477)
T ss_dssp SCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988888743
No 105
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.44 E-value=1.8e-12 Score=105.26 Aligned_cols=115 Identities=32% Similarity=0.477 Sum_probs=105.6
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..++..|++..|+..|.+++.. .|....+++++|.++...+++++|+..+++++..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL---------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---------------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 567888999999999999999999999944 44456789999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4385 349 PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQK 398 (473)
Q Consensus 349 p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 398 (473)
|.+..+++.+|.++..+|++++|+..|++++.++|++..++..++.+...
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998888877643
No 106
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.44 E-value=3.7e-13 Score=106.87 Aligned_cols=90 Identities=18% Similarity=0.396 Sum_probs=81.7
Q ss_pred cCCCCCCCeEEEEEEeee-CCeEEEe-----ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCC
Q psy4385 160 FSTPKDGANVEITLKGEC-EGKVFQE-----GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDK 233 (473)
Q Consensus 160 ~~~p~~~~~v~~~~~g~~-~g~~~~~-----~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~ 233 (473)
...|..|+.|++||.|++ +|++|++ .++.|.+|.+. +++||+.+|..|+.||+..+.+||.++||..+...
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~---~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~ 79 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQ---VIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPP 79 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSS---SCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCC---ccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCC
Confidence 357899999999999998 9999997 37899999887 99999999999999999999999999999887643
Q ss_pred CCCCCCCCceeeeeeccccc
Q psy4385 234 LGVPSNKPATYTITMNNFEK 253 (473)
Q Consensus 234 ~~ip~~~~~~y~i~L~~~~~ 253 (473)
.||+++.+.|++.|.++..
T Consensus 80 -~Ip~~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 80 -KIPGGATLVFEVELLKIER 98 (102)
T ss_dssp -TBCTTCCEEEEEEEEEEGG
T ss_pred -CcCcCCeEEEEEEEEEecc
Confidence 6999999999999988765
No 107
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.43 E-value=6.8e-13 Score=116.14 Aligned_cols=115 Identities=16% Similarity=0.171 Sum_probs=102.6
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHH-HHHcCCh--hHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMC-LLKLKQA--KPAKDQC 341 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~kl~~~--~~A~~~~ 341 (473)
.+..+..+..+|..++..|+|.+|+..|++++ .+.|.+..++.++|.+ ++..+++ ++|+..+
T Consensus 40 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al---------------~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~ 104 (177)
T 2e2e_A 40 NPQNSEQWALLGEYYLWQNDYSNSLLAYRQAL---------------QLRGENAELYAALATVLYYQASQHMTAQTRAMI 104 (177)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 33456788999999999999999999999999 5566678899999999 8899999 9999999
Q ss_pred HHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy4385 342 DKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQ 394 (473)
Q Consensus 342 ~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~ 394 (473)
+++++++|++..+++.+|.+|..+|++++|+..|++++.++|++......+..
T Consensus 105 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 157 (177)
T 2e2e_A 105 DKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVES 157 (177)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999998665444433
No 108
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.40 E-value=1.6e-12 Score=117.02 Aligned_cols=130 Identities=18% Similarity=0.174 Sum_probs=113.0
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|++|+..|++++.. .+.+++++|.++..+|+|++|+..|++++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQDP------------------HSRICFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4567889999999999999999999999711 2568999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK----------------AAVQKLTQTKQKLREQKIKEKQVYA 411 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~----------------~~~~~l~~~~~~~~~~~~~~k~~~~ 411 (473)
+|.++.+++++|.+|..+|+|++|+..|++++++.|.+. .++..++.+...+++..++. ..+.
T Consensus 67 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~ 145 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE-EQLA 145 (213)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHH-HHHH
T ss_pred CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHH-HHHH
Confidence 999999999999999999999999999999999998877 88999999988876655443 3455
Q ss_pred HHhhh
Q psy4385 412 NMFDK 416 (473)
Q Consensus 412 ~~f~~ 416 (473)
+++..
T Consensus 146 ~al~~ 150 (213)
T 1hh8_A 146 LATSM 150 (213)
T ss_dssp HHHTT
T ss_pred HHHHc
Confidence 55443
No 109
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.39 E-value=1.7e-12 Score=135.57 Aligned_cols=141 Identities=9% Similarity=0.042 Sum_probs=120.2
Q ss_pred chhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQC 341 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~ 341 (473)
....+..+..+..+|..++..|+|++|+..|++++.. +|.+..+++++|.++..+|++++|+.++
T Consensus 16 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 80 (568)
T 2vsy_A 16 VRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLAL---------------HPGHPEAVARLGRVRWTQQRHAEAAVLL 80 (568)
T ss_dssp -----CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT---------------STTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3344456778999999999999999999999999944 4556889999999999999999999999
Q ss_pred HHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhc
Q psy4385 342 DKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL---REQKIKEKQVYANMFDKFA 418 (473)
Q Consensus 342 ~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~---~~~~~~~k~~~~~~f~~~~ 418 (473)
+++++++|++..+++++|.+|..+|++++|+..|+++++++|++..++..++.+...+ ++..++ ...|++.+....
T Consensus 81 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A-~~~~~~al~~~p 159 (568)
T 2vsy_A 81 QQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVL-SAQVRAAVAQGV 159 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHH-HHHHHHHHHHTC
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHH-HHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999998877 555443 345666555433
No 110
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.39 E-value=1.6e-12 Score=110.82 Aligned_cols=107 Identities=11% Similarity=0.007 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q psy4385 312 ERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQK 391 (473)
Q Consensus 312 ~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 391 (473)
.++|.....++++|.+++..|+|++|+..+++++.++|.++.+|+.+|.+|..+|+|++|+..|++++.++|++..++..
T Consensus 15 ~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 94 (148)
T 2vgx_A 15 EISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFH 94 (148)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred cCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHH
Confidence 55677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q psy4385 392 LTQTKQKLREQKIKEKQVYANMFDKFAK 419 (473)
Q Consensus 392 l~~~~~~~~~~~~~~k~~~~~~f~~~~~ 419 (473)
++.+...+++..++. ..|.+.......
T Consensus 95 lg~~~~~~g~~~~A~-~~~~~al~~~p~ 121 (148)
T 2vgx_A 95 AAECLLQXGELAEAE-SGLFLAQELIAN 121 (148)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHH-HHHHHHHHHCcC
Confidence 999998887766554 456666554443
No 111
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.39 E-value=9.6e-14 Score=148.23 Aligned_cols=117 Identities=12% Similarity=0.004 Sum_probs=60.9
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|++|+..|++++ .++|.+..+|+++|.+++.+|+|++|+.+|++|+++
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLA---------------ERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHH---------------HHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHh---------------ccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 44556666666666666666666666666 333344444444554444445555555444444444
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLR 400 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 400 (473)
+|+++.+|+++|.+|..+|+|++ +..|++|++++|++..++..++.++..++
T Consensus 497 ~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g 548 (681)
T 2pzi_A 497 FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEG 548 (681)
T ss_dssp STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcC
Confidence 44444444444444444444444 44444444444444444444444444433
No 112
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=3.4e-12 Score=117.80 Aligned_cols=146 Identities=15% Similarity=0.121 Sum_probs=121.1
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCC-----------ChhHHHHHHHHHHHHHHHHHHHHHHcCChhHH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGF-----------EGEQETERKKTLTACHLNAAMCLLKLKQAKPA 337 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~-----------~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A 337 (473)
+..+..+|..++..|++++|+..|++++.+.+..... ..+......|....++.++|.+++.+|+|++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 6888999999999999999999999999754320000 00001124567888999999999999999999
Q ss_pred HHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 338 KDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 338 ~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
+..+++++.++|.++.+++++|.++..+|++++|+..|+++++++|++..++..++.+...+++..++. ..+++++.
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~a~~ 235 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASAL-ETLDAART 235 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998876655443 34555443
No 113
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.38 E-value=3.9e-12 Score=110.85 Aligned_cols=132 Identities=14% Similarity=0.152 Sum_probs=110.6
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
....+..+|..++..|++++|+..|++++. ..|....++.++|.++...+++++|+..+++++..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~---------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLA---------------DAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHh---------------cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 356778889999999999999999999984 44455778899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
+|.+..+++.+|.++..+|++++|+..|++++.++|++..++..++.+....++..++ ...+++++.
T Consensus 106 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~ 172 (186)
T 3as5_A 106 NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEA-LPHFKKANE 172 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHH-HHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888888776554433 334555544
No 114
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.37 E-value=1.4e-12 Score=103.97 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=93.8
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..++..|+|.+|+..|++++.. .|....+++++|.++..+++|++|+..++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 70 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQL---------------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVI 70 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---------------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 345677899999999999999999999944 44457789999999999999999999999999999
Q ss_pred CC--CHHHHHHHHHHHHhc-CCHHHHHHHHHHHHhcCCCC
Q psy4385 349 PN--NEKAFFRRGNAYLDL-NEPELAEKDFQKVLQIDPNN 385 (473)
Q Consensus 349 p~--~~ka~~~~g~a~~~l-g~~~~A~~~~~~al~l~P~~ 385 (473)
|. +..+++++|.++..+ |++++|+..|.+++..+|.+
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 71 EDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred cccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99 999999999999999 99999999999999999975
No 115
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.37 E-value=4.1e-12 Score=118.58 Aligned_cols=141 Identities=17% Similarity=0.278 Sum_probs=117.1
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH--------cCChhHHHHH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK--------LKQAKPAKDQ 340 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k--------l~~~~~A~~~ 340 (473)
...+..+|..++..|+|.+|+..|++++...+.. +....+++++|.|++. +|++++|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~------------~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQID------------PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------------TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCC------------chhHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 6788899999999999999999999999655431 2456789999999999 9999999999
Q ss_pred HHHHhhhCCCCHHHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHHH
Q psy4385 341 CDKAIELEPNNEKAF-----------------FRRGNAYLDLNEPELAEKDFQKVLQIDPN---NKAAVQKLTQTKQKLR 400 (473)
Q Consensus 341 ~~~al~~~p~~~ka~-----------------~~~g~a~~~lg~~~~A~~~~~~al~l~P~---~~~~~~~l~~~~~~~~ 400 (473)
+++++..+|++..+. +.+|.+|..+|+|++|+..|+++++..|+ ...++..++.+...++
T Consensus 120 ~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 120 FQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhc
Confidence 999999999987666 99999999999999999999999999998 4568888888887662
Q ss_pred ---------HHHHHHHHHHHHHhhhhcCCC
Q psy4385 401 ---------EQKIKEKQVYANMFDKFAKHD 421 (473)
Q Consensus 401 ---------~~~~~~k~~~~~~f~~~~~~~ 421 (473)
...+.....|+++....++.+
T Consensus 200 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 229 (261)
T 3qky_A 200 EQSVRARQPERYRRAVELYERLLQIFPDSP 229 (261)
T ss_dssp HTSCGGGHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred ccchhhcccchHHHHHHHHHHHHHHCCCCh
Confidence 222344556777766655543
No 116
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.36 E-value=9.7e-13 Score=134.39 Aligned_cols=155 Identities=13% Similarity=0.030 Sum_probs=121.5
Q ss_pred cccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCC---------CCC---------h------
Q psy4385 252 EKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDG---------GFE---------G------ 307 (473)
Q Consensus 252 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~---------~~~---------~------ 307 (473)
+.+...+.......+..+..+..+|..++..|+|++|+..|++++.+.+... ... .
T Consensus 120 ~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~ 199 (474)
T 4abn_A 120 PEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSV 199 (474)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHH
Confidence 3333444334444445567777888888888888888888888877654300 000 0
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHc--------CChhHHHHHHHHHhhhCC---CCHHHHHHHHHHHHhcCCHHHHHH
Q psy4385 308 ---EQETERKKTLTACHLNAAMCLLKL--------KQAKPAKDQCDKAIELEP---NNEKAFFRRGNAYLDLNEPELAEK 373 (473)
Q Consensus 308 ---~~~~~~~~~~~~~~~nla~~~~kl--------~~~~~A~~~~~~al~~~p---~~~ka~~~~g~a~~~lg~~~~A~~ 373 (473)
.....++|.+..+++++|.++..+ ++|++|+..|+++++++| .++.+|+++|.+|..+|+|++|+.
T Consensus 200 ~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~ 279 (474)
T 4abn_A 200 RQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALE 279 (474)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHH
Confidence 111245667788999999999999 999999999999999999 999999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy4385 374 DFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKE 406 (473)
Q Consensus 374 ~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 406 (473)
.|++|++++|++..++..++.+...+++..+.-
T Consensus 280 ~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi 312 (474)
T 4abn_A 280 GFSQAAALDPAWPEPQQREQQLLEFLSRLTSLL 312 (474)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988887665543
No 117
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.36 E-value=1.2e-11 Score=101.56 Aligned_cols=129 Identities=24% Similarity=0.364 Sum_probs=111.5
Q ss_pred HHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC
Q psy4385 270 KLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP 349 (473)
Q Consensus 270 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p 349 (473)
..+..+|..++..|++++|+..|++++.. .+....++.++|.++...+++++|+..+++++..+|
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 66 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL---------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 66 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc---------------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCC
Confidence 45677899999999999999999999943 444577899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 350 NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
.+..+++.+|.++...|++++|+..|.+++...|.+..++..++.+....++..+. ...+.+++
T Consensus 67 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~ 130 (136)
T 2fo7_A 67 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA-IEYYQKAL 130 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH-HHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999999998888888766554433 33444444
No 118
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.7e-12 Score=119.83 Aligned_cols=116 Identities=24% Similarity=0.322 Sum_probs=106.6
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
.+..+..+..+|..++..|+|++|+..|++++ ...|....+++++|.++.++|++++|+..++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~---------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 199 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMI---------------KRAPEDARGYSNRAAALAKLMSFPEAIADCNKA 199 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHH---------------hcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 34567788899999999999999999999999 445556789999999999999999999999999
Q ss_pred hhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHH
Q psy4385 345 IELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQID------PNNKAAVQKLTQT 395 (473)
Q Consensus 345 l~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~------P~~~~~~~~l~~~ 395 (473)
++++|+++.+++.+|.+|..+|++++|+..|+++++++ |++..++..+..+
T Consensus 200 l~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 200 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999 9998888877665
No 119
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.34 E-value=1.9e-11 Score=114.09 Aligned_cols=134 Identities=24% Similarity=0.289 Sum_probs=112.3
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|++|+..|++++ .+.|.+..++.++|.++..+|++++|+..+++++
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al---------------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 104 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQAL---------------AIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVL 104 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHH---------------HcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4567889999999999999999999999999 4455568899999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 346 ELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 346 ~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
+++|.++.+++.+|.+|..+|++++|+..|+++++++|++......+..+. ..+ ..+.....+.+.+..
T Consensus 105 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~-~~~-~~~~A~~~~~~~~~~ 173 (275)
T 1xnf_A 105 ELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAE-QKL-DEKQAKEVLKQHFEK 173 (275)
T ss_dssp HHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHH-CHHHHHHHHHHHHHH
T ss_pred hcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHH-Hhc-CHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999987665555442 222 223333445444443
No 120
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.33 E-value=9.2e-12 Score=113.95 Aligned_cols=133 Identities=18% Similarity=0.192 Sum_probs=111.2
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|++++|+..|++++. ..+....++.++|.++..+|++++|+..++++++
T Consensus 55 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~---------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 119 (243)
T 2q7f_A 55 EDAIPYINFANLLSSVNELERALAFYDKALE---------------LDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALR 119 (243)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------------cCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3467888899999999999999999999994 4445678889999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
++|.+..+++.+|.++..+|++++|+..|++++.++|++..++..++.+....++..++. ..+.++..
T Consensus 120 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~-~~~~~~~~ 187 (243)
T 2q7f_A 120 AGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEAL-SQFAAVTE 187 (243)
T ss_dssp HTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHH-HHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHH-HHHHHHHH
Confidence 999999999999999999999999999999999999999988888888887765554433 34444443
No 121
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.33 E-value=2.4e-12 Score=128.50 Aligned_cols=90 Identities=21% Similarity=0.414 Sum_probs=82.1
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCC
Q psy4385 45 TPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPD 124 (473)
Q Consensus 45 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~ 124 (473)
.++.||.|++||+++. ||+.|++++ +.|+.|.+|.+.++|||+++|.||++|+++.|.||+..+||..+. ++
T Consensus 157 ~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-----ag 228 (432)
T 1w26_A 157 AVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-----KG 228 (432)
T ss_dssp CCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-----SS
T ss_pred CCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-----CC
Confidence 5889999999999996 999999986 579999999999999999999999999999999999999998664 67
Q ss_pred CceEEEEEEEeeeeccCC
Q psy4385 125 STLVFEVEMISWEAEDIS 142 (473)
Q Consensus 125 ~~l~~~v~l~~~~~~~~~ 142 (473)
.+++|+|+|+++....++
T Consensus 229 ~~~~F~V~v~~v~~~~lp 246 (432)
T 1w26_A 229 KAAKFAINLKKVEERELP 246 (432)
T ss_dssp CEEEEEEECCEECCEECC
T ss_pred ceEEEEEEEEEEeccCCC
Confidence 899999999999765544
No 122
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.33 E-value=4.7e-12 Score=118.20 Aligned_cols=139 Identities=16% Similarity=0.229 Sum_probs=113.7
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|.+|+..|++++...+.. +....+++++|.|++++|+|++|+..|++++.+
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH------------EWAADAQFYLARAYYQNKEYLLAASEYERFIQI 81 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC------------cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999665431 233779999999999999999999999999999
Q ss_pred CCCC---HHHHHHHHHHHHh--------cCCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHH
Q psy4385 348 EPNN---EKAFFRRGNAYLD--------LNEPELAEKDFQKVLQIDPNNKAAV-----------------QKLTQTKQKL 399 (473)
Q Consensus 348 ~p~~---~ka~~~~g~a~~~--------lg~~~~A~~~~~~al~l~P~~~~~~-----------------~~l~~~~~~~ 399 (473)
.|++ ..++|++|.++.. +|++++|+..|++++..+|++..+. ..++.+....
T Consensus 82 ~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~ 161 (261)
T 3qky_A 82 YQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERR 161 (261)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8854 5789999999999 9999999999999999999987665 5556666665
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q psy4385 400 REQKIKEKQVYANMFDKFAK 419 (473)
Q Consensus 400 ~~~~~~~k~~~~~~f~~~~~ 419 (473)
++..++ ...|+++......
T Consensus 162 g~~~~A-~~~~~~~l~~~p~ 180 (261)
T 3qky_A 162 ELYEAA-AVTYEAVFDAYPD 180 (261)
T ss_dssp TCHHHH-HHHHHHHHHHCTT
T ss_pred cCHHHH-HHHHHHHHHHCCC
Confidence 554433 3456666554443
No 123
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.33 E-value=8.6e-12 Score=127.34 Aligned_cols=117 Identities=13% Similarity=0.033 Sum_probs=110.4
Q ss_pred HhhHHHHhhcchhhhcccH-HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 267 EQGKLLKERGTTYFKQDKF-ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
..+..+..+|..++..|+| ++|+..|++++ .++|.+..+++++|.+|+++|+|++|+.+|++++
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al---------------~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 164 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAV---------------KLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGAL 164 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHH---------------hhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3567889999999999999 99999999999 6666778899999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 346 ELEPNNEKAFFRRGNAYLDL---------NEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 346 ~~~p~~~ka~~~~g~a~~~l---------g~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
+++|+ ..+++++|.+|..+ |++++|+..|+++++++|++..++..++.++..+
T Consensus 165 ~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 165 THCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp TTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999 79999999999999 9999999999999999999999999999998776
No 124
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.33 E-value=1.4e-12 Score=139.16 Aligned_cols=119 Identities=12% Similarity=0.000 Sum_probs=109.0
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|+|++|+..|++|+ .++|.+..+++++|.++.++|+|++ +.+|++|++
T Consensus 465 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al---------------~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~ 528 (681)
T 2pzi_A 465 WRWRLVWYRAVAELLTGDYDSATKHFTEVL---------------DTFPGELAPKLALAATAELAGNTDE-HKFYQTVWS 528 (681)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHH---------------HHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHH
Confidence 455678889999999999999999999999 6777789999999999999999999 999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 401 (473)
++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++.++...+.
T Consensus 529 ~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~ 583 (681)
T 2pzi_A 529 TNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRS 583 (681)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC----
T ss_pred hCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999999999999999999999999988755443
No 125
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.32 E-value=1e-11 Score=104.77 Aligned_cols=107 Identities=11% Similarity=0.002 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q psy4385 312 ERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQK 391 (473)
Q Consensus 312 ~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 391 (473)
.++|.....++++|.++++.|+|++|+..|++++.++|+++.+|+.+|.+|..+|+|++|+..|++++.++|+++.++..
T Consensus 12 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 91 (142)
T 2xcb_A 12 GLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFH 91 (142)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 45677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q psy4385 392 LTQTKQKLREQKIKEKQVYANMFDKFAK 419 (473)
Q Consensus 392 l~~~~~~~~~~~~~~k~~~~~~f~~~~~ 419 (473)
++.+...+++..++. ..|.+.......
T Consensus 92 lg~~~~~~g~~~~A~-~~~~~al~~~p~ 118 (142)
T 2xcb_A 92 AAECHLQLGDLDGAE-SGFYSARALAAA 118 (142)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHH-HHHHHHHHhCCC
Confidence 999998887666544 456666555443
No 126
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.31 E-value=1.1e-11 Score=102.50 Aligned_cols=100 Identities=18% Similarity=0.235 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH-------
Q psy4385 315 KTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKA------- 387 (473)
Q Consensus 315 ~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~------- 387 (473)
+..+.++.|+|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 4457789999999999999999999999999999999999999999999999999999999999999997743
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 388 AVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 388 ~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
++..++.+...+++..++. ..|++.+.
T Consensus 85 ~~~~lg~~~~~~~~~~~A~-~~~~kal~ 111 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAV-QWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHH-HHHHHHHh
Confidence 5556666666555444332 34444443
No 127
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.31 E-value=4.8e-12 Score=110.70 Aligned_cols=132 Identities=11% Similarity=0.098 Sum_probs=109.7
Q ss_pred HhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCH
Q psy4385 273 KERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNE 352 (473)
Q Consensus 273 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ 352 (473)
...+..++..|+|++|+..|++++ ...|.+..+++++|.+++.+|+|++|+..+.++++++|.++
T Consensus 14 ~~~~~~~~~~~~~~~A~~~~~~al---------------~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 78 (177)
T 2e2e_A 14 RDPLHQFASQQNPEAQLQALQDKI---------------RANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA 78 (177)
T ss_dssp STTTCCCC-----CCCCHHHHHHH---------------HHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH
T ss_pred hhhhhhhhhccCHHHHHHHHHHHH---------------HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 345667889999999999999999 55556688999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HHhcCCH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q psy4385 353 KAFFRRGNA-YLDLNEP--ELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDKFAKH 420 (473)
Q Consensus 353 ka~~~~g~a-~~~lg~~--~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~~~~ 420 (473)
.+++.+|.+ +...|++ ++|+..|++++.++|++..++..++.+....++..++ ...|.+++......
T Consensus 79 ~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 79 ELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQA-IELWQKVMDLNSPR 148 (177)
T ss_dssp HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHH-HHHHHHHHhhCCCC
Confidence 999999999 8899999 9999999999999999999999999998887665544 34566666554443
No 128
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.30 E-value=8.8e-12 Score=123.19 Aligned_cols=119 Identities=16% Similarity=0.194 Sum_probs=66.5
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
+..+..+..+|..+...|++.+|+..|++++...+ ....++.++|.++...+++++|+..+.+++
T Consensus 166 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p---------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 230 (388)
T 1w3b_A 166 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP---------------NFLDAYINLGNVLKEARIFDRAVAAYLRAL 230 (388)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT---------------TCHHHHHHHHHHHHTTTCTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC---------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34456777788888888888888888888885433 334444444444444444444444444444
Q ss_pred hhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 346 ELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 346 ~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
.++|+++.+++++|.+|...|++++|+..|+++++++|++..++..++.+....
T Consensus 231 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 284 (388)
T 1w3b_A 231 SLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEK 284 (388)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHH
T ss_pred hhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Confidence 444444444444444444444444444444444444444444444444444433
No 129
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.29 E-value=3.1e-11 Score=99.16 Aligned_cols=99 Identities=14% Similarity=0.076 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy4385 316 TLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQT 395 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 395 (473)
..+..+.++|.++++.|+|++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy4385 396 KQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 396 ~~~~~~~~~~~k~~~~~~f~ 415 (473)
...+++..++. ..|.+.+.
T Consensus 82 ~~~~~~~~~A~-~~~~~al~ 100 (126)
T 3upv_A 82 QIAVKEYASAL-ETLDAART 100 (126)
T ss_dssp HHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHhCHHHHH-HHHHHHHH
Confidence 98887665543 34555544
No 130
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.29 E-value=6.8e-12 Score=114.85 Aligned_cols=134 Identities=19% Similarity=0.192 Sum_probs=117.0
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
.....+..+|..++..|++++|+..|++++.. .+....++.++|.++.++|++++|+..++++++
T Consensus 89 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 153 (243)
T 2q7f_A 89 SAATAYYGAGNVYVVKEMYKEAKDMFEKALRA---------------GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVE 153 (243)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhccHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45677888999999999999999999999944 444567899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
++|.+..+++.+|.++...|++++|+..|++++..+|++..++..++.+....++..++ ...+++++..
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~~ 222 (243)
T 2q7f_A 154 LNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKA-LEMLDKAIDI 222 (243)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHH-HHHHHHHHHH
T ss_pred hCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHH-HHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999998777555443 3455555543
No 131
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.29 E-value=7.4e-12 Score=123.71 Aligned_cols=127 Identities=18% Similarity=0.166 Sum_probs=93.9
Q ss_pred CchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHH
Q psy4385 261 NSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQ 340 (473)
Q Consensus 261 ~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~ 340 (473)
.....+..+..+..+|..++..|++++|+..|++++. +.|....+++++|.++.++|++++|+..
T Consensus 59 a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~---------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 123 (388)
T 1w3b_A 59 AIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR---------------LKPDFIDGYINLAAALVAAGDMEGAVQA 123 (388)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH---------------HCTTCHHHHHHHHHHHHHHSCSSHHHHH
T ss_pred HHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHH---------------cCcchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3344455677899999999999999999999999994 4445566677777777777777777777
Q ss_pred HHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4385 341 CDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQ 402 (473)
Q Consensus 341 ~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 402 (473)
+.++++++|++..+++.+|.++..+|++++|+..|.+++.++|++..++..++.+....++.
T Consensus 124 ~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 185 (388)
T 1w3b_A 124 YVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEI 185 (388)
T ss_dssp HHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 77777777777777777777777777777777777777777777777777666666554443
No 132
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.29 E-value=1.6e-11 Score=110.35 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=96.1
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..++..|+|.+|+..|++++ .+.|....+++++|.++..+|+|++|+.++++++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al---------------~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSI---------------NRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 5688999999999999999999999999 5555668899999999999999999999999999998
Q ss_pred CCCH----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 349 PNNE----------------KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 349 p~~~----------------ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
|.+. .+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 102 RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 8877 9999999999999999999999999999999874
No 133
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.28 E-value=3.6e-12 Score=124.50 Aligned_cols=122 Identities=14% Similarity=0.174 Sum_probs=83.9
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|++++|+..|++++ .+.|....+++++|.++.++|++++|+..|++++++
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al---------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 280 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAAL---------------SVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALEL 280 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34556667777777777777777777777 333444566777777777777777777777777777
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-----------HHHHHHHHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN-----------KAAVQKLTQTKQKLREQKI 404 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~-----------~~~~~~l~~~~~~~~~~~~ 404 (473)
+|.++.+++++|.+|..+|++++|+..|++++.++|++ ..++..++.+...+++..+
T Consensus 281 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 348 (368)
T 1fch_A 281 QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDA 348 (368)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGG
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHh
Confidence 77777777777777777777777777777777777766 5666666666666554443
No 134
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.28 E-value=4e-11 Score=115.98 Aligned_cols=120 Identities=18% Similarity=0.277 Sum_probs=107.0
Q ss_pred HHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC
Q psy4385 272 LKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN 351 (473)
Q Consensus 272 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~ 351 (473)
....|..++..|++++|+..|++++...+.. ......++.++|.++.++|++++|+..++++++++|++
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 305 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPSV-----------AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDN 305 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----------hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccc
Confidence 4466899999999999999999999765531 22345678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4385 352 EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQ 402 (473)
Q Consensus 352 ~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 402 (473)
+.+++++|.++..+|++++|+..|+++++++|++..++..+..+...+++.
T Consensus 306 ~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 306 VNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998776543
No 135
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.28 E-value=1.3e-11 Score=113.96 Aligned_cols=132 Identities=20% Similarity=0.209 Sum_probs=100.2
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|++++|+..|++++.. .+....++.++|.++..+|++++|+..+++++.
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---------------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALAS---------------DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---------------CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34667788888889999999999999998843 344566778888888888888888888888888
Q ss_pred --hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 347 --LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 347 --~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
.+|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.+...+++..++. ..+.+++
T Consensus 134 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~~~ 202 (252)
T 2ho1_A 134 DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPAR-QYYDLFA 202 (252)
T ss_dssp CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHH-HHHHHHH
T ss_pred CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHH-HHHHHHH
Confidence 777777888888888888888888888888888888888877777777776665444333 3444443
No 136
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.27 E-value=1.9e-11 Score=112.80 Aligned_cols=135 Identities=13% Similarity=0.135 Sum_probs=115.9
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
.....+..+|..++..|++++|+..|++++. . ...+....++.++|.+++++|++++|+..+.++++
T Consensus 103 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~-~------------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 169 (252)
T 2ho1_A 103 RNARVLNNYGGFLYEQKRYEEAYQRLLEASQ-D------------TLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLR 169 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-C------------TTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh-C------------ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4466788899999999999999999999995 1 02345678899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
.+|.+..+++.+|.++..+|++++|+..|++++..+|++..++..+..+....++..+. ...++++..
T Consensus 170 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A-~~~~~~~~~ 237 (252)
T 2ho1_A 170 LNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTA-ASYGLQLKR 237 (252)
T ss_dssp HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHH-HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888888776555443 334555443
No 137
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.27 E-value=3.5e-12 Score=124.85 Aligned_cols=119 Identities=14% Similarity=0.126 Sum_probs=63.4
Q ss_pred HHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHH--HHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 270 KLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKT--LTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 270 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
..+..+|..+...|++++|+..|++++.. .|. .+.+++++|.++..+|++++|+..+++++++
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~---------------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 242 (365)
T 4eqf_A 178 GLTRRMSKSPVDSSVLEGVKELYLEAAHQ---------------NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV 242 (365)
T ss_dssp -----------CCHHHHHHHHHHHHHHHH---------------SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHh---------------CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 34444555566666666666666666632 222 3445556666666666666666666666666
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQK 403 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 403 (473)
+|+++.+|+++|.+|..+|++++|+..|+++++++|++..++..++.+...+++..
T Consensus 243 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 243 RPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYR 298 (365)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHH
Confidence 66666666666666666666666666666666666666666666665555554333
No 138
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.27 E-value=2.2e-11 Score=119.17 Aligned_cols=101 Identities=14% Similarity=0.220 Sum_probs=94.5
Q ss_pred HHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC
Q psy4385 272 LKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN 351 (473)
Q Consensus 272 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~ 351 (473)
+..+|..++..|+|++|+..|++++ .+.|.+..+++++|.++.++|++++|+..|+++++++|++
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 280 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAAL---------------TVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGF 280 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 4567889999999999999999999 7778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH
Q psy4385 352 EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKA 387 (473)
Q Consensus 352 ~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~ 387 (473)
+.+++++|.+|..+|++++|+..|+++++++|++..
T Consensus 281 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 316 (365)
T 4eqf_A 281 IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRN 316 (365)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC--
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCC
Confidence 999999999999999999999999999999998754
No 139
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.27 E-value=3e-11 Score=105.17 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=115.9
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|++.+|+..|++++...+ ....++.++|.++...|++++|+..++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 71 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADA---------------FDVDVALHLGIAYVKTGAVDRGTELLERSLAD 71 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTS---------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc---------------cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 466788899999999999999999999995433 34678999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
+|.+..+++.+|.++...|++++|+..|++++.++|++..++..++.+....++..+. ...+.+++..
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A-~~~~~~~~~~ 139 (186)
T 3as5_A 72 APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEA-IDSFKIALGL 139 (186)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHH-HHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999988776655543 3355555543
No 140
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.26 E-value=8.4e-13 Score=105.57 Aligned_cols=92 Identities=22% Similarity=0.266 Sum_probs=50.6
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..++..|+|.+|+..|++++ .+.|.+..+++++|.|++++|+|++|+.+|+++++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al---------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 68 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLI---------------TAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYT 68 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------hcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 3445555555555555555555555555 3333344555555555555555555555555555555
Q ss_pred CCC------HHHHHHHHHHHHhcCCHHHHHHHH
Q psy4385 349 PNN------EKAFFRRGNAYLDLNEPELAEKDF 375 (473)
Q Consensus 349 p~~------~ka~~~~g~a~~~lg~~~~A~~~~ 375 (473)
|++ ..+++++|.++..+|++++|+..+
T Consensus 69 p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 69 STAEHVAIRSKLQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp SSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSS
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHH
Confidence 555 555555555555555555554443
No 141
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.26 E-value=6.9e-11 Score=107.86 Aligned_cols=110 Identities=15% Similarity=0.206 Sum_probs=96.2
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..++..|+|++|+..|++++...+.. +....+++++|.|++++|+|++|+..|+++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFG------------PYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 4578889999999999999999999999654431 2245789999999999999999999999999999
Q ss_pred CCCHH---HHHHHHHHHHh------------------cCCHHHHHHHHHHHHhcCCCCHHHHH
Q psy4385 349 PNNEK---AFFRRGNAYLD------------------LNEPELAEKDFQKVLQIDPNNKAAVQ 390 (473)
Q Consensus 349 p~~~k---a~~~~g~a~~~------------------lg~~~~A~~~~~~al~l~P~~~~~~~ 390 (473)
|++.. ++|.+|.++.. +|++++|+..|+++++.+|++..+..
T Consensus 72 P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 72 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 99875 89999999986 57999999999999999999876543
No 142
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.25 E-value=3.4e-11 Score=117.52 Aligned_cols=152 Identities=12% Similarity=0.116 Sum_probs=122.2
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCCh----------------------------------hHHH
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEG----------------------------------EQET 311 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~----------------------------------~~~~ 311 (473)
+..+..+..+|..+...|++.+|+..|++++...+....... ....
T Consensus 129 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 208 (368)
T 1fch_A 129 PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAV 208 (368)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHH
Confidence 345667788888888888888888888888876554221110 0111
Q ss_pred HHHHH--HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHH
Q psy4385 312 ERKKT--LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAV 389 (473)
Q Consensus 312 ~~~~~--~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~ 389 (473)
...|. ...++.++|.++.++|++++|+..+++++.++|+++.+++++|.++..+|++++|+..|++++.++|++..++
T Consensus 209 ~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 288 (368)
T 1fch_A 209 RLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSR 288 (368)
T ss_dssp HHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 23344 5788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy4385 390 QKLTQTKQKLREQKIKEKQVYANMFDKFA 418 (473)
Q Consensus 390 ~~l~~~~~~~~~~~~~~k~~~~~~f~~~~ 418 (473)
..++.+...+++..++. ..|.+++....
T Consensus 289 ~~l~~~~~~~g~~~~A~-~~~~~al~~~~ 316 (368)
T 1fch_A 289 YNLGISCINLGAHREAV-EHFLEALNMQR 316 (368)
T ss_dssp HHHHHHHHHHTCHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHH-HHHHHHHHhCC
Confidence 99999998876665443 45566655433
No 143
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.25 E-value=7.5e-11 Score=106.22 Aligned_cols=132 Identities=17% Similarity=0.123 Sum_probs=83.0
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHc-CChhHHHHHHHHHhh-
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKL-KQAKPAKDQCDKAIE- 346 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl-~~~~~A~~~~~~al~- 346 (473)
...+..+|..++..|++++|+..|.+++ ...|....++.++|.++..+ |++++|+..++++++
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQAL---------------SIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALAD 106 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHH---------------HhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcC
Confidence 3344445555555555555555555555 33344566777777777777 777777777777777
Q ss_pred -hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 347 -LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 347 -~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
.+|.+..+++.+|.++...|++++|+..|.++++.+|++..++..++.+....++..++ ...+.+++..
T Consensus 107 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~~ 176 (225)
T 2vq2_A 107 PTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDA-DYYFKKYQSR 176 (225)
T ss_dssp TTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHH-HHHHHHHHHH
T ss_pred cCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHH-HHHHHHHHHh
Confidence 55555677777777777777777777777777777777777777777776665544433 3344554443
No 144
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.25 E-value=1.9e-11 Score=114.08 Aligned_cols=118 Identities=15% Similarity=0.152 Sum_probs=89.7
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|++|+..|++++. .+... .....++.++|.++..+|++++|+.++++++++
T Consensus 36 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~-----------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 36 SPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNAT-----------KAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTT-----------TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCch-----------hHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 344677788888888888888888888886 22111 112456778888888888888888888888888
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLT-QTKQ 397 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~-~~~~ 397 (473)
+|.++.+++.+|.+|..+|++++|+..|+++++++|++..++..++ .+..
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 104 DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 8888888888888888888888888888888888888888877777 5543
No 145
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.25 E-value=3.4e-11 Score=114.42 Aligned_cols=122 Identities=11% Similarity=0.070 Sum_probs=96.0
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHH----
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDK---- 343 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~---- 343 (473)
....+..+|..+...|++++|+..|++++ ..+|.+..+++++|.+++.+|++++|+..+++
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al---------------~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~ 180 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAW---------------QLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ 180 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHH---------------HhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh
Confidence 34567889999999999999999999999 66667788888888888888888777655554
Q ss_pred ------------------------------HhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--HHHHHH
Q psy4385 344 ------------------------------AIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN--KAAVQK 391 (473)
Q Consensus 344 ------------------------------al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~--~~~~~~ 391 (473)
++.++|+++.+++++|.+|...|++++|+..|.++++++|++ ..++..
T Consensus 181 ~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~ 260 (287)
T 3qou_A 181 DQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXT 260 (287)
T ss_dssp GCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHH
T ss_pred hcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHH
Confidence 456677888888888888888888888888888888888877 667777
Q ss_pred HHHHHHHHHHHHH
Q psy4385 392 LTQTKQKLREQKI 404 (473)
Q Consensus 392 l~~~~~~~~~~~~ 404 (473)
|..+...+++..+
T Consensus 261 l~~~~~~~g~~~~ 273 (287)
T 3qou_A 261 FQEILAALGTGDA 273 (287)
T ss_dssp HHHHHHHHCTTCH
T ss_pred HHHHHHHcCCCCc
Confidence 7777766654433
No 146
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.25 E-value=1.9e-11 Score=110.14 Aligned_cols=79 Identities=15% Similarity=0.054 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC-CCHHHHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDP-NNKAAVQKLTQT 395 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P-~~~~~~~~l~~~ 395 (473)
...++.++|.++..+|++++|+..+.++++.+|.++.+++.+|.++..+|++++|+..|++++.++| ++..++..+..+
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (225)
T 2vq2_A 112 PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKI 191 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3444444444444444444444444444444444444444444444444444444444444444444 444444333333
No 147
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.25 E-value=1.6e-11 Score=107.58 Aligned_cols=148 Identities=14% Similarity=0.119 Sum_probs=108.9
Q ss_pred cccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHH-HHH
Q psy4385 252 EKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMC-LLK 330 (473)
Q Consensus 252 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~k 330 (473)
+.+...+.......+..+..+..+|..+...|++++|+..|++++...+ .+..+..++.+ +..
T Consensus 23 ~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p----------------~~~~~~~~~~~~~~~ 86 (176)
T 2r5s_A 23 AQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ----------------DNSYKSLIAKLELHQ 86 (176)
T ss_dssp HHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC----------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC----------------ChHHHHHHHHHHHHh
Confidence 3344445545666677788888999999999999999999999884432 22233333333 223
Q ss_pred cCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 331 LKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN--KAAVQKLTQTKQKLREQKIKEKQ 408 (473)
Q Consensus 331 l~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~--~~~~~~l~~~~~~~~~~~~~~k~ 408 (473)
......|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+. ..++..++.+...+++..+. ..
T Consensus 87 ~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A-~~ 165 (176)
T 2r5s_A 87 QAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAI-AS 165 (176)
T ss_dssp HHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHH-HH
T ss_pred hcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcH-HH
Confidence 3445568999999999999999999999999999999999999999999999875 55888888888777555443 33
Q ss_pred HHHHHhhh
Q psy4385 409 VYANMFDK 416 (473)
Q Consensus 409 ~~~~~f~~ 416 (473)
.|++.+..
T Consensus 166 ~y~~al~~ 173 (176)
T 2r5s_A 166 KYRRQLYS 173 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555544
No 148
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.25 E-value=1.2e-10 Score=95.32 Aligned_cols=94 Identities=16% Similarity=0.183 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
.++++|.++++.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.++..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHh
Q psy4385 400 REQKIKEKQVYANMF 414 (473)
Q Consensus 400 ~~~~~~~k~~~~~~f 414 (473)
++..++. ..+.+.+
T Consensus 99 g~~~~A~-~~~~~al 112 (121)
T 1hxi_A 99 HNANAAL-ASLRAWL 112 (121)
T ss_dssp HHHHHHH-HHHHHHH
T ss_pred CCHHHHH-HHHHHHH
Confidence 7666544 3444444
No 149
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.24 E-value=4.2e-11 Score=96.74 Aligned_cols=98 Identities=11% Similarity=0.128 Sum_probs=84.3
Q ss_pred HHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcC
Q psy4385 287 LACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLN 366 (473)
Q Consensus 287 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg 366 (473)
.|+..|++++.. .|.+..+++++|.+++.+|+|++|+..|++++.++|.+..+|+++|.+|..+|
T Consensus 3 ~a~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLAQ---------------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHTT---------------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 578889999944 44557899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHH
Q psy4385 367 EPELAEKDFQKVLQIDPN--NKAAVQKLTQTKQKL 399 (473)
Q Consensus 367 ~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~~ 399 (473)
++++|+..|++++.++|. +..+...+......+
T Consensus 68 ~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l 102 (115)
T 2kat_A 68 DRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRL 102 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHh
Confidence 999999999999999885 344555555554444
No 150
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.23 E-value=6.2e-11 Score=100.78 Aligned_cols=99 Identities=13% Similarity=0.084 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCC-------CHH-----HHHHHHHHHHhcCCHHHHHHHHHHHHhc---
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPN-------NEK-----AFFRRGNAYLDLNEPELAEKDFQKVLQI--- 381 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~-------~~k-----a~~~~g~a~~~lg~~~~A~~~~~~al~l--- 381 (473)
.+..+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.|+..+|+|++|+.+|.+||++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4667899999999999999999999999999999 554 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 382 ----DPNNKAAV----QKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 382 ----~P~~~~~~----~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
+|++..++ ..++.++..+++..++.. .|++...-
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~-~y~kAlel 131 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMP-EFKKVVEM 131 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHH-HHHHHHhc
Confidence 99999999 999999999887776654 55555543
No 151
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.23 E-value=9.4e-11 Score=109.31 Aligned_cols=130 Identities=12% Similarity=0.088 Sum_probs=112.0
Q ss_pred hcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHH
Q psy4385 275 RGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKA 354 (473)
Q Consensus 275 ~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka 354 (473)
++..+...++|++|+..|++++...+ ...+....+++++|.++..+|++++|+..+++++.++|.++.+
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 79 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRA-----------LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEV 79 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSC-----------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH
T ss_pred eeeccCccchHHHHHHHHHHHHhccc-----------ccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHH
Confidence 45566778999999999999996432 1145678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 355 FFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 355 ~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
++.+|.+|..+|++++|+..|++++.++|++..++..++.+...+++..++ ...+.+++..
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~~ 140 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLA-QDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHH-HHHHHHHHHh
Confidence 999999999999999999999999999999999999999998887665543 3456666553
No 152
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.23 E-value=1.4e-11 Score=118.06 Aligned_cols=124 Identities=19% Similarity=0.160 Sum_probs=101.4
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|++++|+..|++++...+....... .+....++.++|.++.++|++++|+..+++++++
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVL 265 (330)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 3456666777777777777777777777755432111000 0334568999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
+|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+..
T Consensus 266 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 315 (330)
T 3hym_B 266 IPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIE 315 (330)
T ss_dssp STTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888764
No 153
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.23 E-value=7e-11 Score=114.28 Aligned_cols=110 Identities=24% Similarity=0.296 Sum_probs=102.8
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..++..|+|++|+..|++++ ...|.+..+++++|.+++.+|++++|+..++++++++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l---------------~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAV---------------DGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------hhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 5678899999999999999999999999 5555668899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC---CCHHHHHHHH
Q psy4385 349 PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDP---NNKAAVQKLT 393 (473)
Q Consensus 349 p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P---~~~~~~~~l~ 393 (473)
|++..+++.+|.++..+|++++|+..|++++.++| ++..++..+.
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 99999999999999999999999999999999999 8888877774
No 154
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.22 E-value=1.3e-10 Score=100.30 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy4385 316 TLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQT 395 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 395 (473)
..+..++++|.++++.++|++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCc
Q psy4385 396 KQKLREQKIKEKQVYANMFDKFAKHDT 422 (473)
Q Consensus 396 ~~~~~~~~~~~k~~~~~~f~~~~~~~~ 422 (473)
+..+++..++. ..|++.+........
T Consensus 89 ~~~~g~~~~A~-~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 89 RFDMADYKGAK-EAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHTTCHHHHH-HHHHHHHHHHSSSCC
T ss_pred HHHccCHHHHH-HHHHHHHHhCCCchH
Confidence 98887666444 466776665554443
No 155
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.22 E-value=2.1e-11 Score=116.64 Aligned_cols=123 Identities=13% Similarity=0.260 Sum_probs=101.4
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
....+..+|..++..|++++|+..|++++ ...|....++.++|.++..+|++++|+..+++++++
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 235 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAV---------------ELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDI 235 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHH---------------HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 45677788888888899999999998888 444455678888899999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC------------CHHHHHHHHHHHHHHHHHHHH
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN------------NKAAVQKLTQTKQKLREQKIK 405 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~------------~~~~~~~l~~~~~~~~~~~~~ 405 (473)
+|.+..+++.+|.+|..+|++++|+..|++++.++|+ +..++..++.+...+++..++
T Consensus 236 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 305 (327)
T 3cv0_A 236 NPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLV 305 (327)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHH
Confidence 8888888999999999999999999999999988888 677788888887776554433
No 156
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.4e-10 Score=92.34 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQ 390 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~ 390 (473)
.+..++++|.+++..|+|++|+..|+++++++|.++.+++++|.+|..+|+|++|+..|+++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 356889999999999999999999999999999999999999999999999999999999999999998 66666
Q ss_pred HHHHHHHHH
Q psy4385 391 KLTQTKQKL 399 (473)
Q Consensus 391 ~l~~~~~~~ 399 (473)
.++.+...+
T Consensus 83 ~~~~~~~~~ 91 (111)
T 2l6j_A 83 RLELAQGAV 91 (111)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666655443
No 157
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.20 E-value=3e-11 Score=115.73 Aligned_cols=136 Identities=20% Similarity=0.149 Sum_probs=116.5
Q ss_pred HHHhhHHHHhhcchhhhcc-cHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQD-KFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDK 343 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 343 (473)
.+..+..+..+|..++..| ++++|+..|++++... |....++.++|.++..+|++++|+..+++
T Consensus 86 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~---------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 150 (330)
T 3hym_B 86 YPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLE---------------KTYGPAWIAYGHSFAVESEHDQAMAAYFT 150 (330)
T ss_dssp CTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTC---------------TTCTHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC---------------CccHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3345677888999999999 9999999999999543 34567899999999999999999999999
Q ss_pred HhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 344 AIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 344 al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
+++++|.+..+++.+|.+|...|++++|+..|++++.++|++..++..++.+....++..++. ..+.+++..
T Consensus 151 a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~-~~~~~a~~~ 222 (330)
T 3hym_B 151 AAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAE-KWFLDALEK 222 (330)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred HHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHH-HHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988776655443 345555544
No 158
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.20 E-value=2e-10 Score=87.95 Aligned_cols=83 Identities=35% Similarity=0.480 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy4385 316 TLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQT 395 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 395 (473)
....+++++|.++..+++|++|+..+++++.++|.+..+++++|.++..+|++++|+..|+++++++|++..++..++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHH
Q psy4385 396 KQK 398 (473)
Q Consensus 396 ~~~ 398 (473)
...
T Consensus 87 ~~~ 89 (91)
T 1na3_A 87 KQK 89 (91)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 159
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.20 E-value=8.9e-11 Score=111.72 Aligned_cols=130 Identities=14% Similarity=0.046 Sum_probs=106.6
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHc-CChhHHHHHHHHHh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKL-KQAKPAKDQCDKAI 345 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl-~~~~~A~~~~~~al 345 (473)
..+..+.++|+.+...|+|++|+.+|++|+.+.+.... ....+.++.++|.+|..+ |++++|+.+|++|+
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~---------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al 145 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ---------FRRGANFKFELGEILENDLHDYAKAIDCYELAG 145 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 45788999999999999999999999999966542110 112367899999999995 99999999999999
Q ss_pred hhCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH-------HHHHHHHHHHHHHHHHHH
Q psy4385 346 ELEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKA-------AVQKLTQTKQKLREQKIK 405 (473)
Q Consensus 346 ~~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~-------~~~~l~~~~~~~~~~~~~ 405 (473)
++.|.+ ..++.++|.+|..+|+|++|+..|++++.+.|++.. ++..++.+...+++..++
T Consensus 146 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 218 (292)
T 1qqe_A 146 EWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAA 218 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHH
Confidence 998754 568999999999999999999999999999998754 456677777666554433
No 160
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.20 E-value=8.9e-11 Score=109.48 Aligned_cols=118 Identities=20% Similarity=0.215 Sum_probs=106.1
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..+...|++++|+..|++++ .+.|....++.++|.++..+|++++|+..++++++++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~---------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 138 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAV---------------DRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT 138 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHH---------------hcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcC
Confidence 5568899999999999999999999999 5555667899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4385 349 PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 349 p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 401 (473)
|.++.+++++|...+..+++++|+..|+++++++|++..++..++.+...+..
T Consensus 139 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 139 TTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 99999999999444445599999999999999999999999999988877644
No 161
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.19 E-value=1e-10 Score=111.44 Aligned_cols=130 Identities=14% Similarity=0.048 Sum_probs=102.3
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHH----HHHcCChhHHHHHHHH
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMC----LLKLKQAKPAKDQCDK 343 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~----~~kl~~~~~A~~~~~~ 343 (473)
....+..+|..+.+.|++++|+..|++++...+ ... ..+++.+ +...|++++|+..+++
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p---------------~~~--~~~l~~a~~~l~~~~~~~~eA~~~~~~ 191 (291)
T 3mkr_A 129 SLECMAMTVQILLKLDRLDLARKELKKMQDQDE---------------DAT--LTQLATAWVSLAAGGEKLQDAYYIFQE 191 (291)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCH--HHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCc---------------CcH--HHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 455777788889999999999999999985432 222 2233322 2234889999999999
Q ss_pred HhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 344 AIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 344 al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
+++.+|+++.+|+++|.++..+|++++|+..|++++.++|+++.++..++.+...+++..+.....++++.
T Consensus 192 ~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~ 262 (291)
T 3mkr_A 192 MADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLK 262 (291)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888777665554444555544
No 162
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.19 E-value=1.2e-10 Score=118.98 Aligned_cols=108 Identities=25% Similarity=0.334 Sum_probs=99.5
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
+.+.+..+..+|+.+++.|+|.+|+..|++++.. .| +..+++++|.|++++|+|++|+..|+++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~---------------~p-~~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALEL---------------KE-DPVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH---------------CC-CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc---------------Cc-cHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 4567889999999999999999999999999944 34 3778999999999999999999999999
Q ss_pred hhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHH
Q psy4385 345 IELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAA 388 (473)
Q Consensus 345 l~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~ 388 (473)
++++|+++.+++.+|.+|..+|++++|+..|++++.++|.+...
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 109 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDAS 109 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGG
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccch
Confidence 99999999999999999999999999999999999999976543
No 163
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.19 E-value=2.3e-10 Score=114.91 Aligned_cols=116 Identities=22% Similarity=0.297 Sum_probs=105.5
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
.+..+..+..+|..++..|+|.+|+..|++++ ...|.+..+++++|.+++.+|++++|+..++++
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l---------------~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 86 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAV---------------DGDPDNYIAYYRRATVFLAMGKSKAALPDLTKV 86 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH---------------HhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34567889999999999999999999999999 455566889999999999999999999999999
Q ss_pred hhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH---HHHHHHHHH
Q psy4385 345 IELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK---AAVQKLTQT 395 (473)
Q Consensus 345 l~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~---~~~~~l~~~ 395 (473)
++++|+++.+++.+|.+|..+|++++|+..|++++.++|++. .++..+..+
T Consensus 87 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (450)
T 2y4t_A 87 IQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKS 140 (450)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 776666443
No 164
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.18 E-value=1.6e-10 Score=107.67 Aligned_cols=142 Identities=20% Similarity=0.256 Sum_probs=117.4
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|.+|+..|++++.+...... ...+....++.++|.++..+|++++|+..+.+++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 112 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLG-------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRAL 112 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcC-------CcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 456788999999999999999999999999965421000 0036678899999999999999999999999999
Q ss_pred hh--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 346 EL--------EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI--------DPNNKAAVQKLTQTKQKLREQKIKEKQV 409 (473)
Q Consensus 346 ~~--------~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l--------~P~~~~~~~~l~~~~~~~~~~~~~~k~~ 409 (473)
.+ +|....+++++|.+|..+|++++|+..|++++.+ +|....++..++.+...+++..++. ..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~ 191 (283)
T 3edt_B 113 EIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAE-TL 191 (283)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHH-HH
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHH-HH
Confidence 88 5777899999999999999999999999999999 6777778889999988876665443 34
Q ss_pred HHHHhh
Q psy4385 410 YANMFD 415 (473)
Q Consensus 410 ~~~~f~ 415 (473)
+.+++.
T Consensus 192 ~~~~l~ 197 (283)
T 3edt_B 192 YKEILT 197 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 165
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.18 E-value=1.5e-11 Score=121.06 Aligned_cols=98 Identities=19% Similarity=0.407 Sum_probs=83.1
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCC
Q psy4385 45 TPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPD 124 (473)
Q Consensus 45 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~ 124 (473)
.++.||.|+|||+++. ||+.|+++ .+.|+.|.+|.|.++|||+++|.||++|+++.|.|++...||..+. ++
T Consensus 160 ~~~~gD~V~i~y~g~~-dG~~fd~~--~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-----aG 231 (392)
T 1t11_A 160 AAENGKRVSIDFVGSI-DGVEFEGG--KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-----KG 231 (392)
T ss_dssp CCCTTCEEEEEEEEES-SSSCCTTC--EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----SS
T ss_pred CCCCCCEEEEEEEEEE-CCEEccCC--CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----CC
Confidence 5889999999999995 99999988 3579999999999999999999999999999999986677887543 78
Q ss_pred CceEEEEEEEeeeeccCCCCCCCCceE
Q psy4385 125 STLVFEVEMISWEAEDISPTHDGGIRR 151 (473)
Q Consensus 125 ~~l~~~v~l~~~~~~~~~~~~d~~i~k 151 (473)
.+++|+|+|+++....++. -|..+.+
T Consensus 232 k~~~F~V~v~~i~~~~lpe-ldDEfak 257 (392)
T 1t11_A 232 KAAKFAIKVNKVEARELPE-LNDEFVA 257 (392)
T ss_dssp CEEEECCCEEEEEEEECCC-CSTGGGG
T ss_pred CeEEEEEEEEEEEcCCCCC-cCHHHHH
Confidence 9999999999998765553 3344443
No 166
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.17 E-value=5.1e-11 Score=97.66 Aligned_cols=103 Identities=26% Similarity=0.438 Sum_probs=93.9
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
....+..+|..++..|++++|+..|++++.. .+....+++++|.++...|++++|+..+.+++..
T Consensus 34 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 34 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhcCHHHHHHHHHHHHHH---------------CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 3556778899999999999999999999944 3445678899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN 385 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~ 385 (473)
.|.+..+++.+|.++...|++++|+..|.+++.++|++
T Consensus 99 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 99 DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999999864
No 167
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.17 E-value=1.6e-10 Score=105.45 Aligned_cols=132 Identities=13% Similarity=0.133 Sum_probs=108.6
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH------------------
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK------------------ 330 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k------------------ 330 (473)
...+..+|..+++.|+|++|+..|+++++..+... ....+++++|.|+.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~------------~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 108 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHP------------NIDYVMYMRGLTNMALDDSALQGFFGVDRSDRD 108 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT------------THHHHHHHHHHHHHHHHC--------------C
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC------------cHHHHHHHHHHHHHhhhhhhhhhhhccchhhcC
Confidence 45788899999999999999999999996655421 123478888888876
Q ss_pred cCChhHHHHHHHHHhhhCCCCHHHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH---HHHH
Q psy4385 331 LKQAKPAKDQCDKAIELEPNNEKAF-----------------FRRGNAYLDLNEPELAEKDFQKVLQIDPNNK---AAVQ 390 (473)
Q Consensus 331 l~~~~~A~~~~~~al~~~p~~~ka~-----------------~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~---~~~~ 390 (473)
++++++|+..++++++..|++..++ +.+|.+|...|+|++|+..|+++++..|+++ .++.
T Consensus 109 ~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 188 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALP 188 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHH
Confidence 5789999999999999999988665 6789999999999999999999999999986 5688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 391 KLTQTKQKLREQKIKEKQVYANM 413 (473)
Q Consensus 391 ~l~~~~~~~~~~~~~~k~~~~~~ 413 (473)
.++.+..++++..++. +.++.+
T Consensus 189 ~l~~~~~~~g~~~~A~-~~~~~l 210 (225)
T 2yhc_A 189 LMENAYRQMQMNAQAE-KVAKII 210 (225)
T ss_dssp HHHHHHHHTTCHHHHH-HHHHHH
T ss_pred HHHHHHHHcCCcHHHH-HHHHHH
Confidence 8888888876666554 334443
No 168
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.16 E-value=3.6e-10 Score=113.52 Aligned_cols=119 Identities=18% Similarity=0.279 Sum_probs=105.5
Q ss_pred HHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC
Q psy4385 272 LKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN 351 (473)
Q Consensus 272 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~ 351 (473)
+...|..++..|++.+|+..|++++...+.. ......++.++|.++.++|++++|+..|++++.++|++
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~ 328 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPSI-----------AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDN 328 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 3455999999999999999999999655421 12235689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4385 352 EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 352 ~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 401 (473)
+.+|+.+|.++..+|++++|+..|+++++++|++..++..++.+...+++
T Consensus 329 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 329 VNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999988766544
No 169
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.16 E-value=2.4e-10 Score=108.67 Aligned_cols=112 Identities=20% Similarity=0.165 Sum_probs=90.5
Q ss_pred hhHHHHhhcchhhhc-ccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 268 QGKLLKERGTTYFKQ-DKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~-~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
.+..+.++|..+... |+|++|+.+|++|+.+.+... .......++.++|.++.++|+|++|+.+|++++.
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~---------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ---------SVALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC---------ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 366888999999996 999999999999996654211 0112367899999999999999999999999999
Q ss_pred hCCCCHH-------HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHH
Q psy4385 347 LEPNNEK-------AFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAA 388 (473)
Q Consensus 347 ~~p~~~k-------a~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~ 388 (473)
+.|.+.. +|+++|.++..+|++++|+..|++++.++|+....
T Consensus 187 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 187 SSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp TTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 9987653 68999999999999999999999999999987654
No 170
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.15 E-value=1e-10 Score=120.23 Aligned_cols=117 Identities=25% Similarity=0.344 Sum_probs=99.9
Q ss_pred ccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhH
Q psy4385 257 TWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKP 336 (473)
Q Consensus 257 ~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~ 336 (473)
...++..+....+..+..+|+.++..|+|.+|+..|++++ ..+|.++.+++++|.|++++|+|++
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~~~~~la~~~~~~g~~~~ 77 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAI---------------ELDPNEPVFYSNISACYISTGDLEK 77 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH---------------hhCCCCcHHHHHHHHHHHHcCCHHH
Confidence 3456678888899999999999999999999999999999 5566678999999999999999999
Q ss_pred HHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHH
Q psy4385 337 AKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAV 389 (473)
Q Consensus 337 A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~ 389 (473)
|+..|+++++++|+++.+++.+|.++..+|++++|+..|+ ++.++|+.....
T Consensus 78 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~ 129 (537)
T 3fp2_A 78 VIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDGAS 129 (537)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC---------
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCChHH
Confidence 9999999999999999999999999999999999999995 999999876543
No 171
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.14 E-value=1.9e-10 Score=90.66 Aligned_cols=72 Identities=15% Similarity=0.222 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC
Q psy4385 314 KKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN 385 (473)
Q Consensus 314 ~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~ 385 (473)
+|.++.+++++|.+++++|+|++|+..++++++++|+++.+|+++|.+|..+|++++|+..|++++++.|.+
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 456688999999999999999999999999999999999999999999999999999999999999998753
No 172
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.13 E-value=3.8e-10 Score=93.60 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q psy4385 314 KKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLT 393 (473)
Q Consensus 314 ~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 393 (473)
.+..+..++++|.+++..|+|++|+..+.+++.++|.++.+++++|.++..+|+|++|+..|+++++++|++..++..++
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 34457889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh
Q psy4385 394 QTKQKLREQKIKEKQVYANMFDKF 417 (473)
Q Consensus 394 ~~~~~~~~~~~~~k~~~~~~f~~~ 417 (473)
.+...+++..++. ..|++++...
T Consensus 85 ~~~~~~~~~~~A~-~~~~~a~~~~ 107 (137)
T 3q49_B 85 QCQLEMESYDEAI-ANLQRAYSLA 107 (137)
T ss_dssp HHHHHTTCHHHHH-HHHHHHHHHH
T ss_pred HHHHHHhhHHHHH-HHHHHHHHHC
Confidence 9998887665443 4555555443
No 173
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.11 E-value=1.3e-10 Score=119.61 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q psy4385 312 ERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQK 391 (473)
Q Consensus 312 ~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 391 (473)
...|....++.++|.++..+|++++|+..+++++.++|.+..+++.+|.++..+|++++|+..|++++.++|++..++..
T Consensus 304 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~ 383 (537)
T 3fp2_A 304 DLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTF 383 (537)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 44556678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 392 LTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 392 l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
++.+....++..++. ..|.+++..
T Consensus 384 l~~~~~~~g~~~~A~-~~~~~a~~~ 407 (537)
T 3fp2_A 384 FAEILTDRGDFDTAI-KQYDIAKRL 407 (537)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred HHHHHHHhCCHHHHH-HHHHHHHHc
Confidence 998887776555443 345555443
No 174
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.11 E-value=1.7e-10 Score=110.30 Aligned_cols=127 Identities=12% Similarity=0.191 Sum_probs=109.8
Q ss_pred cc-hhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHH
Q psy4385 276 GT-TYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKA 354 (473)
Q Consensus 276 G~-~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka 354 (473)
|. .+...|++.+|+..|++++ ...|....++.++|.++..+|++++|+..++++++++|+++.+
T Consensus 144 ~~~~~~~~~~~~~A~~~~~~~~---------------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 208 (327)
T 3cv0_A 144 EDFFFAAPNEYRECRTLLHAAL---------------EMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQL 208 (327)
T ss_dssp --CCTTSHHHHHHHHHHHHHHH---------------HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhHHHHHcccHHHHHHHHHHHH---------------hhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHH
Confidence 44 5889999999999999999 4445567899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy4385 355 FFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDKFA 418 (473)
Q Consensus 355 ~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~~ 418 (473)
++.+|.++...|++++|+..|+++++++|++..++..++.+...+++..++. ..++++.....
T Consensus 209 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~a~~~~~ 271 (327)
T 3cv0_A 209 WNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAA-KQLVRAIYMQV 271 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHH-HHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999988776655443 45566555443
No 175
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.11 E-value=2.5e-10 Score=99.83 Aligned_cols=129 Identities=14% Similarity=0.088 Sum_probs=107.8
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCC
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPN 350 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~ 350 (473)
.+...|..++..|++++|+..|++++ ..+|.+..+++++|.+++.+|++++|+..+++++..+|
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al---------------~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p- 71 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLS---------------DELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ- 71 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSC---------------HHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH---------------HHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-
Confidence 46678889999999999999999999 88889999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 351 NEKAFFRRGNAYL-DLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 351 ~~ka~~~~g~a~~-~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
++..+..++.+.. ..+...+|+..|+++++++|++..++..++.+....++..+.. ..|.++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~-~~~~~~l~~ 137 (176)
T 2r5s_A 72 DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEAL-ELLWNILKV 137 (176)
T ss_dssp CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHTT
T ss_pred ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHH-HHHHHHHHh
Confidence 8877666664433 3334456899999999999999999999999998876665444 355555544
No 176
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.11 E-value=2.9e-10 Score=118.58 Aligned_cols=119 Identities=12% Similarity=0.102 Sum_probs=89.9
Q ss_pred cccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHH
Q psy4385 282 QDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNA 361 (473)
Q Consensus 282 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a 361 (473)
.|++++|+..|++++ ..+|.+..+++++|.++..+|+|++|+..++++++++|++..+++++|.+
T Consensus 2 ~g~~~~A~~~~~~al---------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 66 (568)
T 2vsy_A 2 TADGPRELLQLRAAV---------------RHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRV 66 (568)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 478999999999999 66677788999999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 362 YLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 362 ~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
|..+|++++|+..|+++++++|++..++..++.++..+++..++. ..|++.+..
T Consensus 67 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~~ 120 (568)
T 2vsy_A 67 RWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAA-AAYTRAHQL 120 (568)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHh
Confidence 999999999999999999999999999999999998876665443 345555443
No 177
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.09 E-value=2e-10 Score=109.39 Aligned_cols=96 Identities=8% Similarity=0.095 Sum_probs=87.8
Q ss_pred hhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHH
Q psy4385 280 FKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRG 359 (473)
Q Consensus 280 ~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g 359 (473)
...|++++|+..|++++ ...|.++.+++++|.|++++|++++|+..++++++++|+++.+++++|
T Consensus 177 ~~~~~~~eA~~~~~~~l---------------~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~ 241 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMA---------------DKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLV 241 (291)
T ss_dssp HCTTHHHHHHHHHHHHH---------------HHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hCchHHHHHHHHHHHHH---------------HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 35589999999999999 445566889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCHHH-HHHHHHHHHhcCCCCHHHHH
Q psy4385 360 NAYLDLNEPEL-AEKDFQKVLQIDPNNKAAVQ 390 (473)
Q Consensus 360 ~a~~~lg~~~~-A~~~~~~al~l~P~~~~~~~ 390 (473)
.++..+|++++ |..+++++++++|+++.+..
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 99999999976 56899999999999998764
No 178
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.07 E-value=5.1e-10 Score=104.28 Aligned_cols=109 Identities=19% Similarity=0.164 Sum_probs=95.1
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|++|+..|.+++.+...... .-.+....++.++|.++..+|++++|+..+++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG-------KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC-------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456788999999999999999999999999965421000 0036778899999999999999999999999999
Q ss_pred hh--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy4385 346 EL--------EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI 381 (473)
Q Consensus 346 ~~--------~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l 381 (473)
.+ +|....+++.+|.+|..+|++++|+..|++++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99 7778899999999999999999999999999987
No 179
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.07 E-value=8.6e-10 Score=111.63 Aligned_cols=127 Identities=16% Similarity=0.084 Sum_probs=102.6
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|++|+..|++|+.+.+..... ..++.....|.|+|.+|..+|+|++|+.++++++++
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i 123 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHV 123 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 36678889999999999999999999999765421100 113445678999999999999999999999999987
Q ss_pred C--------CCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4385 348 E--------PNNEKAFFRRGNAYLDL--NEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLR 400 (473)
Q Consensus 348 ~--------p~~~ka~~~~g~a~~~l--g~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 400 (473)
. +..+.++.++|.++... ++|++|+.+|++|++++|+++.++..++.+...+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~ 186 (472)
T 4g1t_A 124 CEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLD 186 (472)
T ss_dssp HHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred hHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 3 45678888898888765 46999999999999999999999888887765553
No 180
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.06 E-value=6.6e-10 Score=95.56 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhh------------------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIEL------------------EPNNEKAFFRRGNAYLDLNEPELAEKDFQKV 378 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~------------------~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~a 378 (473)
.+..+.++|..+++.|+|+.|+..|++++.+ +|.++.+|+++|.||..+|+|++|+.+|.++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4678899999999999999999999999999 7888899999999999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 379 LQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 379 l~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
+.++|++..++..++.++..+++..++.. .|.+.+..
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~-~~~~al~l 126 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDEAEE-DLKLLLRN 126 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHH
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHHHHH-HHHHHHhc
Confidence 99999999999999999998877765543 45555443
No 181
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.06 E-value=7e-10 Score=98.80 Aligned_cols=125 Identities=15% Similarity=0.013 Sum_probs=97.2
Q ss_pred cchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCH---
Q psy4385 276 GTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNE--- 352 (473)
Q Consensus 276 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~--- 352 (473)
+...-..+.|+.|...|.... ...+..+..+.++|.+++..++|++|+..|.+++.+.|.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 75 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTD---------------EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWD 75 (198)
T ss_dssp -----------CCCSGGGCCH---------------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCC
T ss_pred hhhhhhhhhccccCchhhCCH---------------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccc
Confidence 334444555555555555444 45566788999999999999999999999999999999887
Q ss_pred -------------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 353 -------------KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 353 -------------ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
.+++++|.+|..+|+|++|+.+|.+++.++|++..++..++.+...+++..++. ..|++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~-~~~~~al~~ 151 (198)
T 2fbn_A 76 DQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAK-ENLYKAASL 151 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHH-HHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHH-HHHHHHHHH
Confidence 899999999999999999999999999999999999999999998887665543 455555544
No 182
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.05 E-value=9.1e-10 Score=108.64 Aligned_cols=133 Identities=18% Similarity=0.193 Sum_probs=110.9
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
....+..+..+|..++..|++..|+..|.+|+.+.+.... ..+..+.+++++|.++..+|+|++|+.++.+|
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA--------YNIRLLQCHSLFATNFLDLKQYEDAISHFQKA 210 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST--------THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc--------chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4456888999999999999999999999999977664321 14456789999999999999999999999999
Q ss_pred hhhCCCCH------HHHHHHHHHHHhcCCHHHHHHHHHHHHh-----cC-CCCHHHHHHHHHHHHHHHHHHHH
Q psy4385 345 IELEPNNE------KAFFRRGNAYLDLNEPELAEKDFQKVLQ-----ID-PNNKAAVQKLTQTKQKLREQKIK 405 (473)
Q Consensus 345 l~~~p~~~------ka~~~~g~a~~~lg~~~~A~~~~~~al~-----l~-P~~~~~~~~l~~~~~~~~~~~~~ 405 (473)
+.+.+... .+++++|.+|..+|++++|+..|++|+. .+ |....++..++.+...+++..++
T Consensus 211 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 283 (383)
T 3ulq_A 211 YSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKA 283 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHH
Confidence 98855432 5899999999999999999999999999 46 77778888898888777665544
No 183
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.05 E-value=9e-10 Score=104.65 Aligned_cols=139 Identities=12% Similarity=-0.040 Sum_probs=109.4
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh-
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL- 347 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~- 347 (473)
+..+..+|..++..++|++|+..|++|+.+....... .....++.++|.+|..+|+|++|+.+++++++.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4456668999999999999999999999854432211 123568999999999999999999999999953
Q ss_pred ------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 348 ------EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 348 ------~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
.+..+.+++++|.+|..+|+|++|+..+++|+++.+.. ..++..++.+...+++..+.....|++.+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 23345789999999999999999999999999987654 678899999998887443444455555554
Q ss_pred h
Q psy4385 416 K 416 (473)
Q Consensus 416 ~ 416 (473)
-
T Consensus 266 i 266 (293)
T 3u3w_A 266 F 266 (293)
T ss_dssp H
T ss_pred H
Confidence 3
No 184
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.04 E-value=2.6e-09 Score=90.29 Aligned_cols=139 Identities=17% Similarity=0.116 Sum_probs=107.7
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|++|+..|.+++.+.+.. ........++.++|.++..+|++++|+.++++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF---------GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh---------CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3457788999999999999999999999999765421 1123345789999999999999999999999999
Q ss_pred hhCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 346 ELEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQKLTQTKQKLREQKIKEKQVYANM 413 (473)
Q Consensus 346 ~~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 413 (473)
.+.+.. ..+++++|.++..+|++++|+..+++++.+.+.. ..++..++.+...+++..++. ..+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 155 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM-HFAEKH 155 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHH-HHHHHH
Confidence 886543 6789999999999999999999999999874322 345666777776665544333 334443
Q ss_pred h
Q psy4385 414 F 414 (473)
Q Consensus 414 f 414 (473)
+
T Consensus 156 ~ 156 (164)
T 3ro3_A 156 L 156 (164)
T ss_dssp H
T ss_pred H
Confidence 3
No 185
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.8e-10 Score=115.07 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=91.7
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHH------HHHHHHHHHHHH---cCChhHHHH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLT------ACHLNAAMCLLK---LKQAKPAKD 339 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~------~~~~nla~~~~k---l~~~~~A~~ 339 (473)
...+..+|..++..|++++|+..|++++ ...|... .+++++|.++.. +|++++|+.
T Consensus 372 ~~~~~~la~~~~~~~~~~~A~~~~~~a~---------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~ 436 (514)
T 2gw1_A 372 PEVPNFFAEILTDKNDFDKALKQYDLAI---------------ELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATN 436 (514)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHH---------------HhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHH
Confidence 3445555555666666666666666665 3334432 389999999999 999999999
Q ss_pred HHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 340 QCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 340 ~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
.+++++.++|+++.+++.+|.+|..+|++++|+..|+++++++|++..++..+....
T Consensus 437 ~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 437 LLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAE 493 (514)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998887765443
No 186
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.03 E-value=1.2e-10 Score=91.14 Aligned_cols=68 Identities=22% Similarity=0.394 Sum_probs=56.7
Q ss_pred HHHHHHHHHcCChhHHHHHHHHHhhhCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHH
Q psy4385 322 LNAAMCLLKLKQAKPAKDQCDKAIELEPNNEK-AFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAV 389 (473)
Q Consensus 322 ~nla~~~~kl~~~~~A~~~~~~al~~~p~~~k-a~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~ 389 (473)
+++|.++++.++|++|+..|+++++++|+++. +++++|.+|..+|++++|+..|+++++++|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 56788888888888888888888888888888 888888888888888888888888888888887776
No 187
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.03 E-value=8.7e-10 Score=84.30 Aligned_cols=84 Identities=27% Similarity=0.344 Sum_probs=76.6
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..++|.+|+..|++++ .+.|....+++++|.++.+++++++|+..+++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~---------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKAL---------------ELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHH---------------hcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 46678899999999999999999999999 445556789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcC
Q psy4385 348 EPNNEKAFFRRGNAYLDLN 366 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg 366 (473)
+|++..+++++|.++..+|
T Consensus 73 ~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CTTCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 9999999999999998764
No 188
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.03 E-value=6.4e-10 Score=116.04 Aligned_cols=133 Identities=13% Similarity=0.086 Sum_probs=114.5
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..+++.|++++|+..|++++ .+.|.+..++++++.++.+.|++++|+..+++++..
T Consensus 372 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 436 (597)
T 2xpi_A 372 KAVTWLAVGIYYLCVNKISEARRYFSKSS---------------TMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARL 436 (597)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45667778889999999999999999998 445556778999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
+|.+..+++.+|.+|...|++++|+..|+++++++|.+..++..++.+..+.++..++ .+.|.+++..
T Consensus 437 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~~~~~~~~~ 504 (597)
T 2xpi_A 437 FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTA-INHFQNALLL 504 (597)
T ss_dssp TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH-HHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999988877655544 3456666554
No 189
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.03 E-value=2.3e-10 Score=90.75 Aligned_cols=98 Identities=17% Similarity=0.146 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CHHHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN--NKAAVQKLTQ 394 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~--~~~~~~~l~~ 394 (473)
+..+++++|.+++..+++++|+..++++++++|.+..+++++|.++..+|++++|+..|+++++++|+ +..++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 35577899999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHhh
Q psy4385 395 TKQKL-REQKIKEKQVYANMFD 415 (473)
Q Consensus 395 ~~~~~-~~~~~~~k~~~~~~f~ 415 (473)
+...+ ++..+.. +.+.++..
T Consensus 85 ~~~~~~~~~~~A~-~~~~~~~~ 105 (112)
T 2kck_A 85 ALRYIEGKEVEAE-IAEARAKL 105 (112)
T ss_dssp HHTTCSSCSHHHH-HHHHHHGG
T ss_pred HHHHHhCCHHHHH-HHHHHHhh
Confidence 98776 6555433 34444443
No 190
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.02 E-value=2.3e-09 Score=101.76 Aligned_cols=140 Identities=13% Similarity=-0.015 Sum_probs=109.4
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh-
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI- 345 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al- 345 (473)
..+..+...|..+...|+|++|+..|++|+......... .....+++++|.+|..+|+|++|+.++++|+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~ 183 (293)
T 2qfc_A 113 QFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344556678888889999999999999999765432111 1236689999999999999999999999999
Q ss_pred --hhCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 346 --ELEPNNE----KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQKLTQTKQKLREQKIKEKQVYANM 413 (473)
Q Consensus 346 --~~~p~~~----ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 413 (473)
+..|++. .+++++|.+|..+|+|++|+..|++++.+.++. ..++..++.+...+++..++-...|++.
T Consensus 184 ~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~A 263 (293)
T 2qfc_A 184 QLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4456543 699999999999999999999999999986431 5678889999888876666534445544
Q ss_pred hh
Q psy4385 414 FD 415 (473)
Q Consensus 414 f~ 415 (473)
..
T Consensus 264 l~ 265 (293)
T 2qfc_A 264 SF 265 (293)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 191
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.02 E-value=1.8e-09 Score=84.32 Aligned_cols=67 Identities=15% Similarity=0.049 Sum_probs=57.9
Q ss_pred HHHHHHHH-HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 312 ERKKTLTA-CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 312 ~~~~~~~~-~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
...|.... +++++|.|+..+|++++|+.+|+++++++|++..++++ +.+.+|+..|.+++.++|++.
T Consensus 28 ~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 28 QTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCcccc
Confidence 45566778 99999999999999999999999999999999998865 567888999998888888764
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.01 E-value=2.5e-09 Score=108.81 Aligned_cols=143 Identities=15% Similarity=0.088 Sum_probs=110.4
Q ss_pred hhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH
Q psy4385 263 DEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCD 342 (473)
Q Consensus 263 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 342 (473)
.+.+..+....+.+..+..+|+|++|+..|++++.+....-. .-+|..+..+.|+|.+|..+|+|++|+.++.
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg-------~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFA-------DTNLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBC-------TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 334555666667777888999999999999999977654322 2256778999999999999999999999999
Q ss_pred HHhhh-----CCC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----CCCCHHHH---HHHHHHHHHHHHHHHHH
Q psy4385 343 KAIEL-----EPN---NEKAFFRRGNAYLDLNEPELAEKDFQKVLQI-----DPNNKAAV---QKLTQTKQKLREQKIKE 406 (473)
Q Consensus 343 ~al~~-----~p~---~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l-----~P~~~~~~---~~l~~~~~~~~~~~~~~ 406 (473)
++|++ .|+ -...++++|.+|..+|+|++|+..|++|+.+ -|+++.+. ..|..++..++.+++++
T Consensus 376 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae 455 (490)
T 3n71_A 376 RMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNE 455 (490)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99976 344 4578999999999999999999999999985 57776654 45556665555555544
Q ss_pred HHHHHHH
Q psy4385 407 KQVYANM 413 (473)
Q Consensus 407 k~~~~~~ 413 (473)
. +|+++
T Consensus 456 ~-~~~~~ 461 (490)
T 3n71_A 456 F-MYHKM 461 (490)
T ss_dssp H-HHHHH
T ss_pred H-HHHHH
Confidence 3 44444
No 193
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.01 E-value=3.9e-09 Score=86.36 Aligned_cols=98 Identities=20% Similarity=0.261 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC---HHHHHHHH
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNE---KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN---KAAVQKLT 393 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~---ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~---~~~~~~l~ 393 (473)
.++++|.+++..|+|++|+..+++++..+|++. .+++.+|.++..+|+|++|+..|++++..+|++ ..++..++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 578999999999999999999999999999998 899999999999999999999999999999999 88899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhc
Q psy4385 394 QTKQKLREQKIKEKQVYANMFDKFA 418 (473)
Q Consensus 394 ~~~~~~~~~~~~~k~~~~~~f~~~~ 418 (473)
.+...+++..++ ...|.++.....
T Consensus 84 ~~~~~~g~~~~A-~~~~~~~~~~~p 107 (129)
T 2xev_A 84 LSQYGEGKNTEA-QQTLQQVATQYP 107 (129)
T ss_dssp HHHHHTTCHHHH-HHHHHHHHHHST
T ss_pred HHHHHcCCHHHH-HHHHHHHHHHCC
Confidence 998877665544 345666665543
No 194
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.01 E-value=2.1e-09 Score=88.11 Aligned_cols=100 Identities=20% Similarity=0.272 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy4385 315 KTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQ 394 (473)
Q Consensus 315 ~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~ 394 (473)
+.....++++|.+++..++|++|+..+++++..+|.+..+++.+|.++..+|++++|+..|++++.++|++..++..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy4385 395 TKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 395 ~~~~~~~~~~~~k~~~~~~f~ 415 (473)
+...+++..++. ..+.+.+.
T Consensus 93 ~~~~~~~~~~A~-~~~~~~~~ 112 (133)
T 2lni_A 93 ALEAMKDYTKAM-DVYQKALD 112 (133)
T ss_dssp HHHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHHhhHHHHH-HHHHHHHH
Confidence 988776655443 34555443
No 195
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.01 E-value=8.3e-10 Score=115.19 Aligned_cols=165 Identities=10% Similarity=0.041 Sum_probs=96.5
Q ss_pred ccccccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCC------------Chh-------H
Q psy4385 249 NNFEKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGF------------EGE-------Q 309 (473)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~------------~~~-------~ 309 (473)
.+++.+...+.......+.....+..+|..+.+.|++++|+..|++++...+..... ..+ .
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 466 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQS 466 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 444444444443333333456678888888999999999999999888654431110 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh------CCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q psy4385 310 ETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL------EPNN-EKAFFRRGNAYLDLNEPELAEKDFQKVLQID 382 (473)
Q Consensus 310 ~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~------~p~~-~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~ 382 (473)
.....|.+..++++++.++.+.|++++|+..+++++++ +|++ ..+|+.+|.+|...|++++|+..|+++++++
T Consensus 467 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 546 (597)
T 2xpi_A 467 SYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS 546 (597)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 01122334555666666666666666666666666665 4443 5566666666666666666666666666666
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 383 PNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 383 P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
|++..++..++.++...++..++ ...|++++
T Consensus 547 p~~~~~~~~l~~~~~~~g~~~~A-~~~~~~~l 577 (597)
T 2xpi_A 547 TNDANVHTAIALVYLHKKIPGLA-ITHLHESL 577 (597)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHH-HHHHHHHH
T ss_pred CCChHHHHHHHHHHHHhCCHHHH-HHHHHHHH
Confidence 66666666666666555444332 23444444
No 196
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.01 E-value=9e-10 Score=92.38 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=87.2
Q ss_pred cccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHhhhC-C-CCHHHHH
Q psy4385 282 QDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK---QAKPAKDQCDKAIELE-P-NNEKAFF 356 (473)
Q Consensus 282 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~---~~~~A~~~~~~al~~~-p-~~~ka~~ 356 (473)
......+.+.|.+.+. ..+....+.+++|.|+.+.+ ++.+++..++.+++.+ | ++..++|
T Consensus 11 ~~~l~~~~~~y~~e~~---------------~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY 75 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKA---------------AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVF 75 (152)
T ss_dssp HHHHHHHHHHHHHHHH---------------TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc---------------cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 3445667777777763 22345779999999999998 6779999999999999 7 6789999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 357 RRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 357 ~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
++|.+|+++++|++|+++++++|+++|+|..+......+..++
T Consensus 76 ~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 76 YLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988777776554
No 197
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.00 E-value=9.2e-10 Score=88.36 Aligned_cols=81 Identities=20% Similarity=0.383 Sum_probs=69.1
Q ss_pred CCCCCCCeEEEEEEeeeCCeEEEec---eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEec-CCCCCCCCCCCCCCC
Q psy4385 161 STPKDGANVEITLKGECEGKVFQEG---TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQ-PQHLWSGKGNDKLGV 236 (473)
Q Consensus 161 ~~p~~~~~v~~~~~g~~~g~~~~~~---~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~-~~~~~~~~g~~~~~i 236 (473)
..|..|+.|+++|.|+++|++|++. ++.|.+|.+. +++||+.+|..|+.|++..+.++ |.. |+..+.
T Consensus 28 ~~~~~gD~V~v~Y~g~~dG~~fdss~~~p~~f~lG~g~---vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~----- 98 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIVDNKKLASASAQNYELTIGSNS---FIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL----- 98 (113)
T ss_dssp -CCCSSEEEEEEEEEEETTEECSTTCCSEEEEEETSSC---SCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG-----
T ss_pred CCCCCCCEEEEEEEEEECCEEcccCCccCEEEEECCCC---hhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC-----
Confidence 4678899999999999999999974 8999999887 99999999999999999999996 444 776542
Q ss_pred CCCCCceeeeeeccc
Q psy4385 237 PSNKPATYTITMNNF 251 (473)
Q Consensus 237 p~~~~~~y~i~L~~~ 251 (473)
+++.+.|++.|.++
T Consensus 99 -~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 -QSKPVTFEVVLKAI 112 (113)
T ss_dssp -GSCCCEEEEEECCB
T ss_pred -CCCEEEEEEEEEEE
Confidence 45789999998764
No 198
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.00 E-value=4.1e-10 Score=111.19 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=97.0
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
....+..+..+|..+...|+|++|+..|++|+.+.+.. ...+....++.|+|.+|..+|+|++|+.+++++
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---------~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~a 250 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE---------KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc---------CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45567889999999999999999999999999775532 113456779999999999999999999999999
Q ss_pred hh-----hC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q psy4385 345 IE-----LE-PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDP 383 (473)
Q Consensus 345 l~-----~~-p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P 383 (473)
++ .+ |..+.+++++|.+|..+|++++|+..|++++.+.+
T Consensus 251 l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 251 IAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99 46 88889999999999999999999999999999854
No 199
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.00 E-value=2.8e-09 Score=100.84 Aligned_cols=109 Identities=18% Similarity=0.166 Sum_probs=93.7
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|.+|+..|++++.+...... ...+....++.++|.++..+|++++|+..+++++
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~-------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 108 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG-------KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcC-------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455778889999999999999999999999955321000 0025678899999999999999999999999999
Q ss_pred hh--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy4385 346 EL--------EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI 381 (473)
Q Consensus 346 ~~--------~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l 381 (473)
.+ +|....+++.+|.+|..+|++++|+..|++++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 181 EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 98 7777889999999999999999999999999985
No 200
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=4.3e-09 Score=83.97 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
.+..++++|.+++..++|+.|+..+++++..+|.++.+++.+|.++..+|++++|+..+++++.++|++..++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy4385 397 QKLREQKIKEKQVYANMF 414 (473)
Q Consensus 397 ~~~~~~~~~~k~~~~~~f 414 (473)
..+++..+.. ..+.+..
T Consensus 83 ~~~~~~~~A~-~~~~~~~ 99 (118)
T 1elw_A 83 EFLNRFEEAK-RTYEEGL 99 (118)
T ss_dssp HHTTCHHHHH-HHHHHHH
T ss_pred HHHhhHHHHH-HHHHHHH
Confidence 8776555443 3444444
No 201
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.98 E-value=2.9e-09 Score=100.74 Aligned_cols=143 Identities=22% Similarity=0.253 Sum_probs=116.1
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
....+..+..+|..++..|+|++|+..|++++.+...... ...+....++.++|.++..+|++++|+..+.++
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 137 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG-------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRA 137 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC-------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC-------CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 3456778899999999999999999999999965421000 003667889999999999999999999999999
Q ss_pred hhhC--------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 345 IELE--------PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI--------DPNNKAAVQKLTQTKQKLREQKIKEKQ 408 (473)
Q Consensus 345 l~~~--------p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l--------~P~~~~~~~~l~~~~~~~~~~~~~~k~ 408 (473)
+.+. |....+++++|.++..+|++++|+..|++++.+ +|....++..++.+...+++..++. .
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~ 216 (311)
T 3nf1_A 138 LEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAE-T 216 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHH-H
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHH-H
Confidence 9884 566789999999999999999999999999998 6666778888898888776665443 3
Q ss_pred HHHHHhh
Q psy4385 409 VYANMFD 415 (473)
Q Consensus 409 ~~~~~f~ 415 (473)
.+.+++.
T Consensus 217 ~~~~al~ 223 (311)
T 3nf1_A 217 LYKEILT 223 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555544
No 202
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.98 E-value=5.3e-10 Score=95.71 Aligned_cols=100 Identities=15% Similarity=0.191 Sum_probs=87.5
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|+|.+|+..|.+++ .+.|....+++++|.++..+|++++|+..+.+++.
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~---------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAI---------------ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 446788899999999999999999999999 44555678999999999999999999999999999
Q ss_pred hCCCCHHHHHHH--HHHHHhcCCHHHHHHHHHHHHhc
Q psy4385 347 LEPNNEKAFFRR--GNAYLDLNEPELAEKDFQKVLQI 381 (473)
Q Consensus 347 ~~p~~~ka~~~~--g~a~~~lg~~~~A~~~~~~al~l 381 (473)
++|.+..++..+ +..+...|++++|+..+.++..+
T Consensus 110 ~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 110 VKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 999999888554 45588899999999999877654
No 203
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.98 E-value=7.6e-10 Score=106.01 Aligned_cols=116 Identities=9% Similarity=-0.039 Sum_probs=82.8
Q ss_pred CchhHHHhhHHHHhhcchhhh-------cccH-------HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHH
Q psy4385 261 NSDEKLEQGKLLKERGTTYFK-------QDKF-------ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAM 326 (473)
Q Consensus 261 ~~~~~~~~a~~~~~~G~~~~~-------~~~~-------~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~ 326 (473)
.....+..+..+...|..+.. .|++ ++|+..|++|+.. +.|.+..+|.++|.
T Consensus 42 al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~--------------~~p~~~~~~~~~~~ 107 (308)
T 2ond_A 42 CLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST--------------LLKKNMLLYFAYAD 107 (308)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTT--------------TTTTCHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHH--------------hCcccHHHHHHHHH
Confidence 334444556667777766653 4664 9999999999962 23344667778888
Q ss_pred HHHHcCChhHHHHHHHHHhhhCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHH
Q psy4385 327 CLLKLKQAKPAKDQCDKAIELEPNNEK-AFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQ 390 (473)
Q Consensus 327 ~~~kl~~~~~A~~~~~~al~~~p~~~k-a~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~ 390 (473)
++.++|++++|+..|+++++++|.++. +|+++|.++...|++++|+..|++|++++|.+..++.
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 172 (308)
T 2ond_A 108 YEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYV 172 (308)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 888888888888888888888877775 7777777777777777777777777777776655443
No 204
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.97 E-value=2.4e-09 Score=105.49 Aligned_cols=145 Identities=14% Similarity=0.097 Sum_probs=116.7
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
....+..+..+|..++..|++..|+..|.+|+.+.+.... ..+..+.+++++|.++..+|+|++|+.++.+|
T Consensus 137 ~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 208 (378)
T 3q15_A 137 DIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPL--------YSIRTIQSLFVIAGNYDDFKHYDKALPHLEAA 208 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTT--------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCC--------chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3566888999999999999999999999999977654211 12356789999999999999999999999999
Q ss_pred hhhCC------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 345 IELEP------NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQ-----IDPNNKAAVQKLTQTKQKLREQKIKEKQVYANM 413 (473)
Q Consensus 345 l~~~p------~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~-----l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 413 (473)
+.+.+ ....+++++|.+|..+|++++|+..|++++. .+|....+...++.+...+++..++ ...+++.
T Consensus 209 l~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a 287 (378)
T 3q15_A 209 LELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKA-FQFIEEG 287 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHH-HHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHH-HHHHHHH
Confidence 98743 2346899999999999999999999999999 7888888889999998887666544 3455555
Q ss_pred hhhhc
Q psy4385 414 FDKFA 418 (473)
Q Consensus 414 f~~~~ 418 (473)
+....
T Consensus 288 l~~~~ 292 (378)
T 3q15_A 288 LDHIT 292 (378)
T ss_dssp HHHCC
T ss_pred HHHHH
Confidence 55443
No 205
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.97 E-value=1.1e-08 Score=83.06 Aligned_cols=104 Identities=22% Similarity=0.248 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHH
Q psy4385 312 ERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQK 391 (473)
Q Consensus 312 ~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 391 (473)
...+.....++.+|.+++..++++.|+..+++++..+|.++.+++.+|.++..+|++++|+..|.+++.++|++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 85 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGR 85 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHH
Confidence 34667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 392 LTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 392 l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
++.+...+++..+.. ..+.+.+..
T Consensus 86 ~~~~~~~~~~~~~A~-~~~~~~~~~ 109 (131)
T 2vyi_A 86 MGLALSSLNKHVEAV-AYYKKALEL 109 (131)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred HHHHHHHhCCHHHHH-HHHHHHHhc
Confidence 999988776655443 345555443
No 206
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.97 E-value=2.3e-09 Score=111.52 Aligned_cols=124 Identities=9% Similarity=0.007 Sum_probs=114.2
Q ss_pred CchhHHHhhHHHHhhcchhhhccc----------HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 261 NSDEKLEQGKLLKERGTTYFKQDK----------FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK 330 (473)
Q Consensus 261 ~~~~~~~~a~~~~~~G~~~~~~~~----------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k 330 (473)
.....++...++..+|..+...++ |++|+..|.+++ ..+|.+..+|++++.++.+
T Consensus 55 ~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l---------------~~~pK~y~aW~hR~w~l~~ 119 (567)
T 1dce_A 55 ILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCL---------------RVNPKSYGTWHHRCWLLSR 119 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHT
T ss_pred HHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHH
Confidence 345556677889999999998888 999999999999 7778889999999999999
Q ss_pred cC--ChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 331 LK--QAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLN-EPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 331 l~--~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
++ +|++|+..|++++++||.|..||+.|+.++..++ .+++|++++.++++++|+|..++..++.+...+
T Consensus 120 l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 120 LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 99 6799999999999999999999999999999999 999999999999999999999999999888775
No 207
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.97 E-value=1.4e-09 Score=103.42 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=92.5
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|+|++|+..|++|+....... ...+....+++|+|.+|.++|+|++|+.+++++++
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~--------~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH--------DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS--------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc--------cchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3466789999999999999999999999997654321 12456678999999999999999999999999998
Q ss_pred hCCCC------HHHHHHHHHHHHhcC-CHHHHHHHHHHHHhcC
Q psy4385 347 LEPNN------EKAFFRRGNAYLDLN-EPELAEKDFQKVLQID 382 (473)
Q Consensus 347 ~~p~~------~ka~~~~g~a~~~lg-~~~~A~~~~~~al~l~ 382 (473)
+.+.. ..+|+++|.+|..+| .+++|+.+|++|+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 225 ISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 86543 789999999999999 5799999999999763
No 208
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.96 E-value=9.9e-10 Score=108.30 Aligned_cols=110 Identities=13% Similarity=0.028 Sum_probs=97.2
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|++|+..|.+|+.+.... ........++.|+|.+|..+|++++|+.++++++
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---------~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 249 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI---------QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAA 249 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999765421 1123567899999999999999999999999999
Q ss_pred h-----hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q psy4385 346 E-----LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN 384 (473)
Q Consensus 346 ~-----~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~ 384 (473)
. .+|..+.+++++|.+|..+|++++|+..+++++.+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 250 KVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9 78888999999999999999999999999999999653
No 209
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.96 E-value=3.7e-09 Score=101.23 Aligned_cols=109 Identities=14% Similarity=0.056 Sum_probs=86.0
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+.++|..+.. |+|++|+.+|++|+.+.+... .......++.++|.+|.++|+|++|+.+|++++.
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~---------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEE---------RLRQAAELIGKASRLLVRQQKFDEAAASLQKEKS 183 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCC---------ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 346677788888887 888888888888886554210 0123467889999999999999999999999998
Q ss_pred hCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 347 LEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 347 ~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
+.|.+ ..+++++|.+++.+|++++|+..|++++ ++|+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 184 MYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 86544 3478888999999999999999999999 998754
No 210
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=98.95 E-value=2.1e-09 Score=91.19 Aligned_cols=66 Identities=23% Similarity=0.503 Sum_probs=60.4
Q ss_pred CCCCCeEEEEEEeeeCCeEEEe------------------ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCC
Q psy4385 163 PKDGANVEITLKGECEGKVFQE------------------GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQH 224 (473)
Q Consensus 163 p~~~~~v~~~~~g~~~g~~~~~------------------~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~ 224 (473)
...|+.|++||+|+++|++||+ .|+.|.+|.+. +++||+.||..|+.||+..+.|||.+
T Consensus 2 i~~Gd~V~v~Y~g~ldG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~---vi~G~eeaL~gm~~Ge~~~v~Ipp~~ 78 (157)
T 3pr9_A 2 VEKGKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQ---VLPGLDEAILEMDVGEEREVVLPPEK 78 (157)
T ss_dssp CCTTCEEEEEEEEEETTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSS---SCHHHHHHHHHCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEECCEEEEeccccccccccccccccCCCCEEEEECCCc---HHHHHHHHHcCCCCCCEEEEEECcHH
Confidence 3578999999999999999996 37899999987 99999999999999999999999999
Q ss_pred CCCCCCC
Q psy4385 225 LWSGKGN 231 (473)
Q Consensus 225 ~~~~~g~ 231 (473)
+||..+.
T Consensus 79 aYG~~~~ 85 (157)
T 3pr9_A 79 AFGKRDP 85 (157)
T ss_dssp TTCCCCG
T ss_pred hcCCCCh
Confidence 9997654
No 211
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.94 E-value=1.1e-09 Score=104.96 Aligned_cols=137 Identities=10% Similarity=0.029 Sum_probs=104.3
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+.+.|..+...|+|++|+.+|++|+.+..... .......++.++|.+|.. |+|++|+.+|++|+.
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g---------~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG---------TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT---------CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 4467888999999999999999999999997654311 012346789999999999 999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 347 LEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK------AAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 347 ~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~------~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
+.|.. ..+++++|.+|..+|+|++|+..|++++.+.|++. .++..++.+...+++..+ ....|++.+
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~-A~~~~~~al 222 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVA-AQKCVRESY 222 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHT
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHh
Confidence 87653 57899999999999999999999999999976543 234444555544443333 333445444
No 212
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.93 E-value=4.7e-09 Score=93.03 Aligned_cols=140 Identities=15% Similarity=0.120 Sum_probs=108.9
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|++|+..|.+++.+..... ..+....++.++|.++..+|++++|+.++.+++.+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~---------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSG---------DHTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcC---------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 467888999999999999999999999997655321 24567889999999999999999999999999988
Q ss_pred ---CC----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--CH----HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 348 ---EP----NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN--NK----AAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 348 ---~p----~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~--~~----~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
.+ ....+++++|.++..+|++++|+..+++++.+.+. +. .++..++.+....++..+.. ..+.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~al 174 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQ-QHWLRAR 174 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHH-HHHHHHH
Confidence 33 33577999999999999999999999999977432 22 23466777776665554433 3444444
Q ss_pred hhh
Q psy4385 415 DKF 417 (473)
Q Consensus 415 ~~~ 417 (473)
...
T Consensus 175 ~~~ 177 (203)
T 3gw4_A 175 DIF 177 (203)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 213
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.93 E-value=4.6e-09 Score=99.31 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 318 TACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 318 ~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
+..+.++|.++++.|+|++|+..|++++.++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.++.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy4385 398 KLREQKIKEKQVYANMFD 415 (473)
Q Consensus 398 ~~~~~~~~~k~~~~~~f~ 415 (473)
.+++..++.. .|.+.+.
T Consensus 84 ~~g~~~~A~~-~~~~al~ 100 (281)
T 2c2l_A 84 EMESYDEAIA-NLQRAYS 100 (281)
T ss_dssp HTTCHHHHHH-HHHHHHH
T ss_pred HcCCHHHHHH-HHHHHHH
Confidence 8876665543 4444443
No 214
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.91 E-value=1.5e-10 Score=118.08 Aligned_cols=118 Identities=13% Similarity=0.169 Sum_probs=97.2
Q ss_pred ccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC
Q psy4385 253 KIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK 332 (473)
Q Consensus 253 ~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~ 332 (473)
++...+.......+..+..+..+|..+++.|+|++|+..|++|+ +++|....+++++|.+|..+|
T Consensus 24 ~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al---------------~l~p~~~~~~~~lg~~~~~~g 88 (477)
T 1wao_1 24 NAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAI---------------ELDKKYIKGYYRRAASNMALG 88 (477)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HSCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHcC
Confidence 33333333344445567889999999999999999999999999 445566889999999999999
Q ss_pred ChhHHHHHHHHHhhhCCCCHHHHHHHHHH--HHhcCCHHHHHHHHH-----------HHHhcCCCC
Q psy4385 333 QAKPAKDQCDKAIELEPNNEKAFFRRGNA--YLDLNEPELAEKDFQ-----------KVLQIDPNN 385 (473)
Q Consensus 333 ~~~~A~~~~~~al~~~p~~~ka~~~~g~a--~~~lg~~~~A~~~~~-----------~al~l~P~~ 385 (473)
+|++|+..++++++++|++..+++.++.+ +..+|+|++|+..++ +++.++|+.
T Consensus 89 ~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 89 KFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp CHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 99999999999999999999999999999 899999999999999 899888865
No 215
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.90 E-value=1.1e-08 Score=95.58 Aligned_cols=77 Identities=14% Similarity=0.102 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHH----cCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHH
Q psy4385 318 TACHLNAAMCLLK----LKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPNNKAAV 389 (473)
Q Consensus 318 ~~~~~nla~~~~k----l~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~~~~~~ 389 (473)
+.+++++|.+|.. .+++++|+..++++++.+ ++.+++++|.+|.. .+++++|+..|+++++++ +..++
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~ 149 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGC 149 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHH
Confidence 4555555555555 555555555555555542 45555555555555 555555555555555543 34445
Q ss_pred HHHHHHHHH
Q psy4385 390 QKLTQTKQK 398 (473)
Q Consensus 390 ~~l~~~~~~ 398 (473)
..++.+...
T Consensus 150 ~~lg~~~~~ 158 (273)
T 1ouv_A 150 TILGSLYDA 158 (273)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 555555443
No 216
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.90 E-value=4.7e-09 Score=104.04 Aligned_cols=125 Identities=14% Similarity=0.051 Sum_probs=108.0
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|+|.+|+..|++++...+.. ......+++++|.++..+|+|++|+.++++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTED-----------LRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccC-----------hhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4567788899999999999999999999999764321 12345789999999999999999999999999
Q ss_pred hh------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHHHH
Q psy4385 346 EL------EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI------DPNNKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 346 ~~------~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~~ 401 (473)
++ +|....+++++|.+|..+|++++|+..|.+++.+ .|....++..++.+...+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 98 6778899999999999999999999999999999 55556678888888887776
No 217
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=1.5e-08 Score=84.62 Aligned_cols=100 Identities=16% Similarity=0.097 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy4385 316 TLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN---EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKL 392 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~---~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l 392 (473)
.....++.+|.+++..++|++|+..++++++++|++ ..+++++|.+|..+++|++|+..|++++.++|++..++..+
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 346788999999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 393 TQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 393 ~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
+.+...+++..++ ...|.+.+..
T Consensus 106 a~~~~~~~~~~~A-~~~~~~al~~ 128 (148)
T 2dba_A 106 SQALEKLGRLDQA-VLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHTCHHHH-HHHHHHHHHH
T ss_pred HHHHHHcCCHHHH-HHHHHHHHHc
Confidence 9998887665544 3455555543
No 218
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=98.90 E-value=3.9e-09 Score=90.46 Aligned_cols=67 Identities=19% Similarity=0.314 Sum_probs=61.9
Q ss_pred CCCCCCeEEEEEEeee-CCeEEEe-----ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCC
Q psy4385 162 TPKDGANVEITLKGEC-EGKVFQE-----GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGN 231 (473)
Q Consensus 162 ~p~~~~~v~~~~~g~~-~g~~~~~-----~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~ 231 (473)
.+..++.|++||.|++ +|++||+ .|+.|.+|.+. +++||+.||..|+.||+..|.|+|.++||....
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~---vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDAS---LSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSS---SCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCC---ccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 6789999999999998 9999997 48999999987 999999999999999999999999999997543
No 219
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.89 E-value=2.1e-08 Score=80.65 Aligned_cols=98 Identities=28% Similarity=0.377 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 318 TACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 318 ~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
..+++++|.++...+++++|+..+.+++..+|.+..+++.+|.++...|++++|+..|++++.++|.+..++..++.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q psy4385 398 KLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 398 ~~~~~~~~~k~~~~~~f~~ 416 (473)
..++..+. ...+.+++..
T Consensus 89 ~~~~~~~A-~~~~~~~~~~ 106 (125)
T 1na0_A 89 KQGDYDEA-IEYYQKALEL 106 (125)
T ss_dssp HTTCHHHH-HHHHHHHHHH
T ss_pred HhcCHHHH-HHHHHHHHHh
Confidence 76555443 3455555543
No 220
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.88 E-value=4.4e-09 Score=100.64 Aligned_cols=134 Identities=12% Similarity=0.043 Sum_probs=101.8
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHH-HHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTA-CHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
+.....+...|..+...|++++|...|++++.+.+. ... +|.++|.++.++|++++|+..|++|
T Consensus 96 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 160 (308)
T 2ond_A 96 KKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI---------------DPTLVYIQYMKFARRAEGIKSGRMIFKKA 160 (308)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS---------------CTHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc---------------CccHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 345667888999999999999999999999965432 233 7888888888888888888888888
Q ss_pred hhhCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 345 IELEPNNEKAFFRRGNAYL-DLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 345 l~~~p~~~ka~~~~g~a~~-~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
++.+|.+..+|...+.... .+|++++|+..|+++++++|++..++..+..+...+++.. ..+..|.+...
T Consensus 161 ~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~-~A~~~~~~al~ 231 (308)
T 2ond_A 161 REDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDN-NTRVLFERVLT 231 (308)
T ss_dssp HTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHH-HHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH-HHHHHHHHHHh
Confidence 8888888877776665543 3688888888888888888888888877777765554333 33445555554
No 221
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.87 E-value=1.1e-08 Score=83.28 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-------HHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN-------KAAV 389 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~-------~~~~ 389 (473)
.+..++++|.+++..++|+.|+..+.+++..+|.++.+++++|.+|..+|++++|+..|.+++.++|++ ..++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 466889999999999999999999999999999999999999999999999999999999999999887 8888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 390 QKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 390 ~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
..++.+...+++..++ ...|.+++..
T Consensus 83 ~~la~~~~~~~~~~~A-~~~~~~~~~~ 108 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDA-IHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHH-HHHHHHHHHh
Confidence 8999988877665544 3456666553
No 222
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.87 E-value=1.1e-08 Score=100.59 Aligned_cols=142 Identities=18% Similarity=0.139 Sum_probs=113.9
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
....+..+..+|..++..|+|++|+..|++++.+.+... ..+....++.++|.++..+|++++|+.+++++
T Consensus 183 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 253 (406)
T 3sf4_A 183 RAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG---------DKAAERRAYSNLGNAYIFLGEFETASEYYKKT 253 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcC---------CcHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 344567888999999999999999999999997655321 12345669999999999999999999999999
Q ss_pred hhhCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 345 IELEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQKLTQTKQKLREQKIKEKQVYAN 412 (473)
Q Consensus 345 l~~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k~~~~~ 412 (473)
+.+.+.. ..+++++|.+|..+|++++|+..|++++.+.+.. ..++..++.+...+++..++. ..+.+
T Consensus 254 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~ 332 (406)
T 3sf4_A 254 LLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAM-HFAEK 332 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH-HHHHH
T ss_pred HHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHH-HHHHH
Confidence 9987765 7899999999999999999999999999986644 456778888887776555443 34454
Q ss_pred Hhhh
Q psy4385 413 MFDK 416 (473)
Q Consensus 413 ~f~~ 416 (473)
.+..
T Consensus 333 al~~ 336 (406)
T 3sf4_A 333 HLEI 336 (406)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 223
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.86 E-value=1.3e-08 Score=95.23 Aligned_cols=104 Identities=11% Similarity=0.027 Sum_probs=52.0
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHH-HHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC-
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKK-TLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE- 348 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~- 348 (473)
.++.+|..+++.++|.+|+..|++++.+. ++ ....+++++|.++..+|++++|+.+|++++.-.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~--------------d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~ 202 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWP--------------DKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPA 202 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCS--------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccC--------------CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCC
Confidence 44455555555555555555555444221 01 112345555555555555555555555555332
Q ss_pred -CC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHH
Q psy4385 349 -PN-NEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAV 389 (473)
Q Consensus 349 -p~-~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~ 389 (473)
|. .+.+++++|.|+..+|+.++|...|++++..+|+ ..+.
T Consensus 203 ~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 203 GEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp TTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 33 3345555555555555555555555555555555 4433
No 224
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.86 E-value=2.2e-09 Score=102.34 Aligned_cols=127 Identities=8% Similarity=-0.036 Sum_probs=111.3
Q ss_pred CchhHHHhhHHHHhhcchh----hhc---ccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCC
Q psy4385 261 NSDEKLEQGKLLKERGTTY----FKQ---DKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQ 333 (473)
Q Consensus 261 ~~~~~~~~a~~~~~~G~~~----~~~---~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~ 333 (473)
.....++....+..++..+ ... +++.+++..+.+++ ..+|.+..++++++.+..+++.
T Consensus 95 ~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l---------------~~~pkny~aW~~R~~vl~~l~~ 159 (306)
T 3dra_A 95 IALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAML---------------SSDPKNHHVWSYRKWLVDTFDL 159 (306)
T ss_dssp HHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHhcc
Confidence 3344455666777777777 555 78899999999999 7778889999999999999999
Q ss_pred hh--HHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCC------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4385 334 AK--PAKDQCDKAIELEPNNEKAFFRRGNAYLDLNE------PELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQ 402 (473)
Q Consensus 334 ~~--~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~------~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 402 (473)
++ ++++.|+++++.||.|..||..|+.++..++. ++++++++.+++.++|+|..++..++.+....+..
T Consensus 160 ~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~ 236 (306)
T 3dra_A 160 HNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRS 236 (306)
T ss_dssp TTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCC
T ss_pred cChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCC
Confidence 99 99999999999999999999999999999998 99999999999999999999999999888776543
No 225
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=1.1e-08 Score=92.29 Aligned_cols=83 Identities=13% Similarity=-0.008 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHH----cCChhHHHHHHHHHhhhCC--CCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCC
Q psy4385 315 KTLTACHLNAAMCLLK----LKQAKPAKDQCDKAIELEP--NNEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPN 384 (473)
Q Consensus 315 ~~~~~~~~nla~~~~k----l~~~~~A~~~~~~al~~~p--~~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~ 384 (473)
+.++.+++++|.+|.. .+++.+|+.++.++++.+| .++.+++++|.+|.. .+++++|+..|++|+++ |.
T Consensus 82 ~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~ 160 (212)
T 3rjv_A 82 AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SR 160 (212)
T ss_dssp TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SC
T ss_pred CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CC
Confidence 3456677778877776 7778888888888887776 347778888888877 77788888888888777 55
Q ss_pred CHHHHHHHHHHHHH
Q psy4385 385 NKAAVQKLTQTKQK 398 (473)
Q Consensus 385 ~~~~~~~l~~~~~~ 398 (473)
+..+...|+.++..
T Consensus 161 ~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 161 TGYAEYWAGMMFQQ 174 (212)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHc
Confidence 66677777776643
No 226
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=98.84 E-value=3.7e-09 Score=89.48 Aligned_cols=66 Identities=18% Similarity=0.485 Sum_probs=60.3
Q ss_pred CCCCCeEEEEEEeee-CCeEEEec------------------eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCC
Q psy4385 163 PKDGANVEITLKGEC-EGKVFQEG------------------TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQ 223 (473)
Q Consensus 163 p~~~~~v~~~~~g~~-~g~~~~~~------------------~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~ 223 (473)
+..|+.|++||+|++ +|++||+. |+.|.+|.+. +++||+.||..|+.|++..+.+||.
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~---vi~G~eeaL~gm~~Ge~~~v~ipp~ 78 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQ---LIQGFEEAVLDMEVGDEKTVKIPAE 78 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTC---SCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCC---hhHHHHHHHcCCCCCCEEEEEECcH
Confidence 567899999999999 99999874 6899999987 9999999999999999999999999
Q ss_pred CCCCCCCC
Q psy4385 224 HLWSGKGN 231 (473)
Q Consensus 224 ~~~~~~g~ 231 (473)
.+||..+.
T Consensus 79 ~aYG~~~~ 86 (151)
T 1ix5_A 79 KAYGNRNE 86 (151)
T ss_dssp TSSCSCCS
T ss_pred HHCCCCCc
Confidence 99997654
No 227
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.84 E-value=3.5e-09 Score=107.10 Aligned_cols=107 Identities=21% Similarity=0.085 Sum_probs=90.6
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHc--------------
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKL-------------- 331 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl-------------- 331 (473)
+.....+..+|..+...|++.+|+..|++|+ +..|....++.++|.||...
T Consensus 244 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al---------------~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~ 308 (472)
T 4g1t_A 244 PGVTDVLRSAAKFYRRKDEPDKAIELLKKAL---------------EYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYG 308 (472)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHSTTCHHHHHHHHHHHHHHHHHHHHC------C
T ss_pred ccHHHHHHHHHHHHHHcCchHHHHHHHHHHH---------------HhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3456678889999999999999999999999 55666677888888887543
Q ss_pred -----CChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH
Q psy4385 332 -----KQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKA 387 (473)
Q Consensus 332 -----~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~ 387 (473)
..++.|+..+.+++.++|.+..+++++|.+|..+|+|++|+..|++++.++|++..
T Consensus 309 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~ 369 (472)
T 4g1t_A 309 KRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVA 369 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChH
Confidence 34678889999999999999999999999999999999999999999998887654
No 228
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.83 E-value=9.5e-09 Score=87.10 Aligned_cols=72 Identities=18% Similarity=0.295 Sum_probs=67.2
Q ss_pred HHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4385 329 LKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEP----------ELAEKDFQKVLQIDPNNKAAVQKLTQTKQK 398 (473)
Q Consensus 329 ~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~----------~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 398 (473)
-++++|++|+..++++++++|+++.+|+++|.++..++++ ++|+..|++|++++|++..++..++.++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999875 599999999999999999999999999987
Q ss_pred HH
Q psy4385 399 LR 400 (473)
Q Consensus 399 ~~ 400 (473)
+.
T Consensus 93 lg 94 (158)
T 1zu2_A 93 FA 94 (158)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 229
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.83 E-value=8.4e-08 Score=90.90 Aligned_cols=132 Identities=11% Similarity=0.033 Sum_probs=106.0
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
......+...+..++..|+|++|+..|.+++...+.. .........++++|.++...++|++|+.++.+++
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 142 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH---------PEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLL 142 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC---------HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCC---------hhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 3455677788999999999999999999999764421 2223455667889999999999999999999999
Q ss_pred hhCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHH---hcCCCCH----HHHHHHHHHHHHHHHHHHHH
Q psy4385 346 ELEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVL---QIDPNNK----AAVQKLTQTKQKLREQKIKE 406 (473)
Q Consensus 346 ~~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al---~l~P~~~----~~~~~l~~~~~~~~~~~~~~ 406 (473)
.+.+.. ..+++++|.+|..+|+|++|+..|++|+ +..|++. .++..++.+...+++..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al 216 (293)
T 2qfc_A 143 NQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESL 216 (293)
T ss_dssp TTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHH
Confidence 876543 5689999999999999999999999999 5566654 47788888887776666544
No 230
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.82 E-value=4.6e-09 Score=104.07 Aligned_cols=140 Identities=16% Similarity=0.161 Sum_probs=110.5
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|+|++|+..|++++.+.+.. ........++.++|.+++.+|++++|+.++++++.
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 291 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF---------GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLA 291 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---------TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc---------CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 445688899999999999999999999999665421 11223456899999999999999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 347 LEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 347 ~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
+.+.. ..+++.+|.+|..+|++++|+..|++++.+.+.. ..++..++.++..+++..++. ..|++.+
T Consensus 292 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~al 370 (411)
T 4a1s_A 292 LAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERAL-KYAEQHL 370 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHH-HHHHHHH
Confidence 87754 6889999999999999999999999999986543 346777888877766554433 3444444
Q ss_pred hh
Q psy4385 415 DK 416 (473)
Q Consensus 415 ~~ 416 (473)
.-
T Consensus 371 ~~ 372 (411)
T 4a1s_A 371 QL 372 (411)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 231
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=98.82 E-value=9.6e-09 Score=92.47 Aligned_cols=66 Identities=23% Similarity=0.503 Sum_probs=60.0
Q ss_pred CCCCCeEEEEEEeeeCCeEEEe------------------ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCC
Q psy4385 163 PKDGANVEITLKGECEGKVFQE------------------GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQH 224 (473)
Q Consensus 163 p~~~~~v~~~~~g~~~g~~~~~------------------~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~ 224 (473)
...|+.|++||+|+++|++||+ .|+.|.+|.+. +++||+.||..|+.|++..+.|||.+
T Consensus 2 i~~Gd~V~v~Y~g~ldG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~---vIpG~eeaL~Gm~vGek~~v~Ippe~ 78 (231)
T 3prb_A 2 VEKGKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQ---VLPGLDEAILEMDVGEEREVVLPPEK 78 (231)
T ss_dssp CCTTCEEEEEEEEEETTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSS---SCHHHHHHHHTCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEECCEEEEeccchhcccccccccccCCCCEEEEeCCCc---HHHHHHHHHcCCCCCCEEEEEeCcHH
Confidence 3578999999999999999996 26899999987 99999999999999999999999999
Q ss_pred CCCCCCC
Q psy4385 225 LWSGKGN 231 (473)
Q Consensus 225 ~~~~~g~ 231 (473)
+||..+.
T Consensus 79 AYGe~~~ 85 (231)
T 3prb_A 79 AFGKRDP 85 (231)
T ss_dssp TTCCCCG
T ss_pred hcCCCCh
Confidence 9998653
No 232
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.82 E-value=1.2e-08 Score=97.39 Aligned_cols=125 Identities=9% Similarity=-0.080 Sum_probs=112.5
Q ss_pred CchhHHHhhHHHHhhcchhhhcc--cHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHH----HHc---
Q psy4385 261 NSDEKLEQGKLLKERGTTYFKQD--KFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCL----LKL--- 331 (473)
Q Consensus 261 ~~~~~~~~a~~~~~~G~~~~~~~--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~----~kl--- 331 (473)
.....++...++..+|..+...+ ++.+|+..+.+++ ..+|.+..+++.++.++ ..+
T Consensus 59 ~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L---------------~~nPk~y~aW~~R~~iL~~~~~~l~~~ 123 (306)
T 3dra_A 59 GINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIA---------------LDNEKNYQIWNYRQLIIGQIMELNNND 123 (306)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHH---------------HHCTTCCHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH---------------HHCcccHHHHHHHHHHHHHHHHhcccc
Confidence 34445567788899999999888 9999999999999 67777889999999999 777
Q ss_pred CChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHH--HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4385 332 KQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPE--LAEKDFQKVLQIDPNNKAAVQKLTQTKQKLR 400 (473)
Q Consensus 332 ~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~--~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 400 (473)
+++++++..|+++++.+|.|..+|+.|+.++..++.++ ++++.+.++++.+|.|-.++.....+...+.
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~ 194 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKK 194 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSG
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Confidence 79999999999999999999999999999999999999 9999999999999999999988888776654
No 233
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.81 E-value=3.2e-09 Score=85.95 Aligned_cols=77 Identities=14% Similarity=0.087 Sum_probs=70.1
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
.+..+..+..+|..++..|+|++|+..|++++ .+.|.+..+++++|.|+.++|++++|+..+.++
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al---------------~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGV---------------KQFPNHQALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 35678899999999999999999999999999 556667889999999999999999999999999
Q ss_pred hhhCCCCHHHHH
Q psy4385 345 IELEPNNEKAFF 356 (473)
Q Consensus 345 l~~~p~~~ka~~ 356 (473)
+..+|+++....
T Consensus 88 l~~~p~~~~~~~ 99 (117)
T 3k9i_A 88 IAETSDDETIQS 99 (117)
T ss_dssp HHHHCCCHHHHH
T ss_pred HHhCCCcHHHHH
Confidence 999999987653
No 234
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.81 E-value=1.3e-08 Score=85.90 Aligned_cols=109 Identities=20% Similarity=0.206 Sum_probs=91.7
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|+|++|+..|++++.+.+... ..+....++.++|.++..++++++|+..+++++.
T Consensus 47 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~---------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 47 AERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK---------DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC---------CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3456888999999999999999999999997655321 1234577899999999999999999999999998
Q ss_pred hCC------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q psy4385 347 LEP------NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN 384 (473)
Q Consensus 347 ~~p------~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~ 384 (473)
+.+ ....+++.+|.++..+|++++|+..+++++++...
T Consensus 118 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 118 IAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 742 23578999999999999999999999999987554
No 235
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=98.81 E-value=1.4e-08 Score=85.85 Aligned_cols=68 Identities=18% Similarity=0.224 Sum_probs=62.0
Q ss_pred CCCCCCCeEEEEEEeee--CCeEEEec----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCC
Q psy4385 161 STPKDGANVEITLKGEC--EGKVFQEG----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGN 231 (473)
Q Consensus 161 ~~p~~~~~v~~~~~g~~--~g~~~~~~----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~ 231 (473)
..+..++.|++||+|+. +|++|++. |+.|.+|.+. +++||+.||..|+.|++..+.++|..+||..+.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~~p~~f~~G~g~---vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTNQ---IIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTTCCEEEETTCCC---SCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCCcCEEEEECCCC---ccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 45678999999999998 89999984 7999999987 999999999999999999999999999997654
No 236
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.81 E-value=1.3e-08 Score=96.79 Aligned_cols=122 Identities=19% Similarity=0.088 Sum_probs=102.3
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh-
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL- 347 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~- 347 (473)
+..+...|..++..|+|++|+..|++++...+.. ......++.++|.++..+|++++|+..+++++.+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTED-----------LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCccc-----------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 4567778999999999999999999999764321 2234678999999999999999999999999988
Q ss_pred -----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHHHH
Q psy4385 348 -----EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK------AAVQKLTQTKQKLRE 401 (473)
Q Consensus 348 -----~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~------~~~~~l~~~~~~~~~ 401 (473)
.|..+.+++.+|.+|..+|++++|+..|.+++.+.|... .++..++.+...+++
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 556678999999999999999999999999999876432 367777877777666
No 237
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.79 E-value=2.2e-08 Score=95.22 Aligned_cols=140 Identities=17% Similarity=0.122 Sum_probs=111.0
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+..+|..++..|++++|+..|++++.+.+.. ........++.++|.++..+|++++|+..+++++
T Consensus 180 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 250 (338)
T 3ro2_A 180 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF---------GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTL 250 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---------TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc---------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4456678899999999999999999999999665421 1133456689999999999999999999999999
Q ss_pred hhCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 346 ELEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQKLTQTKQKLREQKIKEKQVYANM 413 (473)
Q Consensus 346 ~~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 413 (473)
.+.+.. ..+++.+|.++..+|++++|+..|++++.+.|.. ..++..++.+...+++..++. ..+.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 329 (338)
T 3ro2_A 251 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM-HFAEKH 329 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHH
T ss_pred HHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHH-HHHHHH
Confidence 887665 7889999999999999999999999999986543 336667777777765554433 344444
Q ss_pred hh
Q psy4385 414 FD 415 (473)
Q Consensus 414 f~ 415 (473)
+.
T Consensus 330 ~~ 331 (338)
T 3ro2_A 330 LE 331 (338)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 238
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.79 E-value=1.5e-08 Score=91.45 Aligned_cols=112 Identities=12% Similarity=0.009 Sum_probs=99.9
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC----ChhHHHHHHH
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK----QAKPAKDQCD 342 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~----~~~~A~~~~~ 342 (473)
..+.++..+|..++..+++.+|+..|++|+.. .++.+++++|.+|.. + ++++|+.++.
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-----------------g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ-----------------GDGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-----------------TCHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-----------------CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 45778999999999999999999999999832 347899999999998 7 8999999999
Q ss_pred HHhhhCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHH
Q psy4385 343 KAIELEPNNEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPN--NKAAVQKLTQTKQK 398 (473)
Q Consensus 343 ~al~~~p~~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~ 398 (473)
++++ +.++.+++++|.+|.. .+++++|+..|+++++..|. ++.+...|+.++..
T Consensus 78 ~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 78 KAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 9965 5799999999999998 99999999999999999883 58889999998865
No 239
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.79 E-value=5.1e-09 Score=108.88 Aligned_cols=132 Identities=11% Similarity=-0.041 Sum_probs=115.6
Q ss_pred ccccccccCchhHHHhhHHHHhhcchhhhcc--cHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 253 KIKDTWQLNSDEKLEQGKLLKERGTTYFKQD--KFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK 330 (473)
Q Consensus 253 ~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k 330 (473)
++...++......++...++..+|..+.+.+ +|++|+..|.+++ ++++.+..+|.+++.+..+
T Consensus 91 ~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l---------------~~d~~N~~aW~~R~~~l~~ 155 (567)
T 1dce_A 91 AELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFL---------------EADERNFHCWDYRRFVAAQ 155 (567)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHH---------------hhccccccHHHHHHHHHHH
Confidence 3334444445556677888999999999999 7799999999999 7778889999999999999
Q ss_pred cC-ChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy4385 331 LK-QAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDL--------------NEPELAEKDFQKVLQIDPNNKAAVQKLTQT 395 (473)
Q Consensus 331 l~-~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~l--------------g~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 395 (473)
++ .+++++++++++++.+|.|..||+.|+.++..+ +.+++|++++.+|+.++|+|..++..++-+
T Consensus 156 l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~l 235 (567)
T 1dce_A 156 AAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 235 (567)
T ss_dssp TCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 99 999999999999999999999999999999886 568999999999999999999999988877
Q ss_pred HHHH
Q psy4385 396 KQKL 399 (473)
Q Consensus 396 ~~~~ 399 (473)
....
T Consensus 236 l~~~ 239 (567)
T 1dce_A 236 LGRA 239 (567)
T ss_dssp HSCC
T ss_pred HhcC
Confidence 6543
No 240
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.79 E-value=4.5e-08 Score=91.43 Aligned_cols=126 Identities=12% Similarity=0.080 Sum_probs=85.3
Q ss_pred hHHHHhhcchhhh----cccHHHHHHHHHHHhhhhcC----------CC----CCChhH-----HHHHHHHHHHHHHHHH
Q psy4385 269 GKLLKERGTTYFK----QDKFELACRNYKKAIPYLDF----------DG----GFEGEQ-----ETERKKTLTACHLNAA 325 (473)
Q Consensus 269 a~~~~~~G~~~~~----~~~~~~A~~~y~~al~~~~~----------~~----~~~~~~-----~~~~~~~~~~~~~nla 325 (473)
+..+..+|..++. .+++++|+..|++++..... .. ..+.+. ...+......+++++|
T Consensus 38 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg 117 (273)
T 1ouv_A 38 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLG 117 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcCCccHHHHHH
Confidence 3455566666666 66666666666666644210 00 001010 1112223567888888
Q ss_pred HHHHH----cCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 326 MCLLK----LKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 326 ~~~~k----l~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
.+|.. .+++++|+.+++++++.+ ++.+++++|.+|.. .+++++|+..|+++++. ++..++..++.+..
T Consensus 118 ~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~ 193 (273)
T 1ouv_A 118 GIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGNMYH 193 (273)
T ss_dssp HHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 88888 888888888888888876 67888888888888 88888888888888876 35677778888776
Q ss_pred H
Q psy4385 398 K 398 (473)
Q Consensus 398 ~ 398 (473)
.
T Consensus 194 ~ 194 (273)
T 1ouv_A 194 H 194 (273)
T ss_dssp H
T ss_pred c
Confidence 6
No 241
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=98.79 E-value=1.9e-08 Score=85.50 Aligned_cols=78 Identities=21% Similarity=0.315 Sum_probs=66.6
Q ss_pred CCCCCeEEEEEEeeeCCeEEEeceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCCCCCCc
Q psy4385 163 PKDGANVEITLKGECEGKVFQEGTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVPSNKPA 242 (473)
Q Consensus 163 p~~~~~v~~~~~g~~~g~~~~~~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip~~~~~ 242 (473)
+..++.|++||+|+.+|++|++..+.|.+|.+. +++||+.||..|+.|++..+.++|..+||..+. .+
T Consensus 3 i~~gd~V~v~Y~g~~dG~~fdss~~~f~~G~g~---vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~---------~l 70 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQVEGEVLDQGELSYLHGHRN---LIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP---------EG 70 (158)
T ss_dssp CCTTEEEEEEEEEEETTEEEEEEEEEEETTSSS---SCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG---------GG
T ss_pred CCCCCEEEEEEEEEECCEEEEeeEEEEEECCCC---cChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc---------ce
Confidence 467899999999998999999988999999887 999999999999999999999999999997643 34
Q ss_pred eeeeeecccc
Q psy4385 243 TYTITMNNFE 252 (473)
Q Consensus 243 ~y~i~L~~~~ 252 (473)
.+.+.+..|.
T Consensus 71 v~~v~~~~f~ 80 (158)
T 3cgm_A 71 VQVVPLSAFP 80 (158)
T ss_dssp EEEEEGGGSC
T ss_pred EEEEEHHHCC
Confidence 5555555553
No 242
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.78 E-value=1.8e-08 Score=99.09 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=107.7
Q ss_pred HhhHHHHhhcchhhhccc--------------------HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHH
Q psy4385 267 EQGKLLKERGTTYFKQDK--------------------FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAM 326 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~--------------------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~ 326 (473)
..+..+..+|..++..|+ |.+|+..|.+++.+.... ...+....++.++|.
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~---------~~~~~~~~~~~~la~ 195 (406)
T 3sf4_A 125 GEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL---------GDRAAQGRAFGNLGN 195 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc---------cCcHHHHHHHHHHHH
Confidence 346688899999999999 999999999999665432 114566789999999
Q ss_pred HHHHcCChhHHHHHHHHHhhhCCCCHH------HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------HHHHHHHHH
Q psy4385 327 CLLKLKQAKPAKDQCDKAIELEPNNEK------AFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN------KAAVQKLTQ 394 (473)
Q Consensus 327 ~~~kl~~~~~A~~~~~~al~~~p~~~k------a~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~ 394 (473)
++..+|+|++|+..+++++++.+.... +++++|.+|..+|++++|+..|++++.+.|.. ..++..++.
T Consensus 196 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 275 (406)
T 3sf4_A 196 THYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGN 275 (406)
T ss_dssp HHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHH
Confidence 999999999999999999998765443 89999999999999999999999999987765 556777777
Q ss_pred HHHHHHHHHHH
Q psy4385 395 TKQKLREQKIK 405 (473)
Q Consensus 395 ~~~~~~~~~~~ 405 (473)
+....++..++
T Consensus 276 ~~~~~g~~~~A 286 (406)
T 3sf4_A 276 TYTLLQDYEKA 286 (406)
T ss_dssp HHHHTTCHHHH
T ss_pred HHHHhCcHHHH
Confidence 77666555443
No 243
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.77 E-value=1.4e-07 Score=90.56 Aligned_cols=120 Identities=9% Similarity=0.018 Sum_probs=105.8
Q ss_pred HHHhhHHHHhhcchhhhccc----------HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCC-
Q psy4385 265 KLEQGKLLKERGTTYFKQDK----------FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQ- 333 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~----------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~- 333 (473)
.++...++..++..+...+. +.+++..+..++ ..+|.+..+|++++.++.+++.
T Consensus 60 nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L---------------~~~PKny~aW~hR~wlL~~l~~~ 124 (331)
T 3dss_A 60 NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCL---------------RVNPKSYGTWHHRCWLLSRLPEP 124 (331)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHCSSC
T ss_pred CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHhccCcc
Confidence 34455667777777765554 788999999998 6777889999999999999994
Q ss_pred -hhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 334 -AKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNE-PELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 334 -~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~-~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
+++++..|++++++||.|..||+.|+.++..++. +++++.++.++++.+|.|..++..+..+...+
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999 69999999999999999999999998887776
No 244
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.77 E-value=3.2e-08 Score=97.38 Aligned_cols=99 Identities=19% Similarity=0.183 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhh----------------hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIE----------------LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~----------------~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
.+..+.++|.++++.++|++|+..|++|++ ++|.+..+|+++|.+|+.+++|++|+.+|++|++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 355788999999999999999999999998 7888899999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4385 381 IDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDK 416 (473)
Q Consensus 381 l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 416 (473)
++|++..++..++.++..+++..++. ..|++++..
T Consensus 302 ~~p~~~~a~~~lg~~~~~~g~~~eA~-~~l~~Al~l 336 (370)
T 1ihg_A 302 IDPSNTKALYRRAQGWQGLKEYDQAL-ADLKKAQEI 336 (370)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred hCchhHHHHHHHHHHHHHccCHHHHH-HHHHHHHHh
Confidence 99999999999999998887766544 455555544
No 245
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.76 E-value=5.4e-08 Score=97.38 Aligned_cols=118 Identities=12% Similarity=0.029 Sum_probs=94.4
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+....+.+......|+|++|+..|++++.+....-. .-+|..+..+.|+|.+|..+|+|++|+.+|+++|++
T Consensus 297 ~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg-------~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 297 YARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFE-------DSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKP 369 (433)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBC-------TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccC-------hhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 3444445555556678999999999999977554222 225677889999999999999999999999999976
Q ss_pred -----CC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----CCCCHHHHHHH
Q psy4385 348 -----EP---NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI-----DPNNKAAVQKL 392 (473)
Q Consensus 348 -----~p---~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l-----~P~~~~~~~~l 392 (473)
.| +-...|+++|.+|..+|+|++|+..|++|+.+ .|+++.+....
T Consensus 370 ~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~ 427 (433)
T 3qww_A 370 YSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIK 427 (433)
T ss_dssp HHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 34 44578999999999999999999999999986 57887765533
No 246
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.75 E-value=3.9e-08 Score=77.87 Aligned_cols=80 Identities=11% Similarity=0.012 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhhC-------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHH
Q psy4385 318 TACHLNAAMCLLKLKQAKPAKDQCDKAIELE-------PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQ 390 (473)
Q Consensus 318 ~~~~~nla~~~~kl~~~~~A~~~~~~al~~~-------p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~ 390 (473)
+.-++.+|..+++.++|..|+..++.|++.. +..+..++++|.||.++|+++.|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4567899999999999999999999999863 346788999999999999999999999999999999999877
Q ss_pred HHHHHHH
Q psy4385 391 KLTQTKQ 397 (473)
Q Consensus 391 ~l~~~~~ 397 (473)
++..+..
T Consensus 85 n~~~~~~ 91 (104)
T 2v5f_A 85 NLKYFEY 91 (104)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 7764443
No 247
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.74 E-value=3.5e-08 Score=94.73 Aligned_cols=120 Identities=12% Similarity=-0.023 Sum_probs=106.7
Q ss_pred chhHHHhhHHHHhhcchhhhcc--cHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCC-hhHHH
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQD--KFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQ-AKPAK 338 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~-~~~A~ 338 (473)
....++....+..++..+...+ .|.+++..+.+++ +.+|.+..+|++++.+...++. +++++
T Consensus 101 L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l---------------~~dprNy~AW~~R~~vl~~l~~~~~eel 165 (331)
T 3dss_A 101 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFL---------------EADERNFHCWDYRRFVAAQAAVAPAEEL 165 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHhCcCHHHHH
Confidence 3445566778888898888888 4999999999999 7788889999999999999999 59999
Q ss_pred HHHHHHhhhCCCCHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 339 DQCDKAIELEPNNEKAFFRRGNAYLDL--------------NEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 339 ~~~~~al~~~p~~~ka~~~~g~a~~~l--------------g~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
++++++++.+|.|..||+.|+.++..+ +.+++++.++.+++.++|+|..++..+.-+.
T Consensus 166 ~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll 237 (331)
T 3dss_A 166 AFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLL 237 (331)
T ss_dssp HHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999999888 5699999999999999999999997665544
No 248
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.73 E-value=1.3e-07 Score=91.24 Aligned_cols=125 Identities=12% Similarity=-0.011 Sum_probs=106.7
Q ss_pred cchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC-ChhHHHHHHHHHhhhCCCCHHH
Q psy4385 276 GTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK-QAKPAKDQCDKAIELEPNNEKA 354 (473)
Q Consensus 276 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~-~~~~A~~~~~~al~~~p~~~ka 354 (473)
.....+.+..++|+..+.++| .++|.+..+++.++.++..++ .+++++..++++|..+|.+..+
T Consensus 61 r~~~~~~e~se~AL~lt~~~L---------------~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~a 125 (349)
T 3q7a_A 61 RAIAAKEEKSERALELTEIIV---------------RMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQV 125 (349)
T ss_dssp HHHHHTTCCSHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHH---------------HhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHH
Confidence 333444555678999999999 778888999999999999999 5999999999999999999999
Q ss_pred HHHHHHHHHhc-C-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhh
Q psy4385 355 FFRRGNAYLDL-N-EPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQK-------IKEKQVYANMFD 415 (473)
Q Consensus 355 ~~~~g~a~~~l-g-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~-------~~~k~~~~~~f~ 415 (473)
|+.|+.++..+ + ++++++..+.++++++|.|-.++...+-+...+.... ..+-+.+.+++.
T Consensus 126 W~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~ 195 (349)
T 3q7a_A 126 WHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLR 195 (349)
T ss_dssp HHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHH
Confidence 99999999998 8 9999999999999999999999998888887776554 244445555543
No 249
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=98.72 E-value=5e-08 Score=85.78 Aligned_cols=66 Identities=20% Similarity=0.312 Sum_probs=60.8
Q ss_pred CCCCCeEEEEEEeee-CCeEEEec----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCC
Q psy4385 163 PKDGANVEITLKGEC-EGKVFQEG----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGN 231 (473)
Q Consensus 163 p~~~~~v~~~~~g~~-~g~~~~~~----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~ 231 (473)
+..++.|+|+|++++ +|++|++. |++|.+|.+. ++++|+.||..|++|++..|.|+|..+||..+.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~---vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGS---LISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSSS---SCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCCC---cchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 567899999999999 99999984 8999999887 999999999999999999999999999997654
No 250
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=98.70 E-value=4.1e-08 Score=84.59 Aligned_cols=66 Identities=20% Similarity=0.312 Sum_probs=60.5
Q ss_pred CCCCCeEEEEEEeee-CCeEEEec----eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCC
Q psy4385 163 PKDGANVEITLKGEC-EGKVFQEG----TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGN 231 (473)
Q Consensus 163 p~~~~~v~~~~~g~~-~g~~~~~~----~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~ 231 (473)
+..++.|+++|+|++ +|++|++. |+.|.+|.+. +++||+.||..|+.|++..|.++|..+||..+.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~---vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~ 73 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGS---LISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSSSCEEEETTSCS---SCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCCcCEEEEECCCC---cchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 567899999999999 99999983 7899999887 999999999999999999999999999997643
No 251
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.70 E-value=5.7e-08 Score=97.30 Aligned_cols=117 Identities=10% Similarity=-0.065 Sum_probs=93.7
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh-
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL- 347 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~- 347 (473)
+......-..+..+|+|++|+..|++++......-. .-++..+..+.|+|.+|..+|+|++|+.+|.++|.+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg-------~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~ 359 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLP-------DINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPY 359 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCC-------TTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCC-------ccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhH
Confidence 334444455567889999999999999976544322 225667889999999999999999999999999966
Q ss_pred ----CCC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----CCCCHHHHHHH
Q psy4385 348 ----EPN---NEKAFFRRGNAYLDLNEPELAEKDFQKVLQI-----DPNNKAAVQKL 392 (473)
Q Consensus 348 ----~p~---~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l-----~P~~~~~~~~l 392 (473)
.|+ -...++++|.+|..+|+|++|+..|++|+++ -|+++.+...+
T Consensus 360 ~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~ 416 (429)
T 3qwp_A 360 RIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLI 416 (429)
T ss_dssp HHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHH
T ss_pred HHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 344 4478999999999999999999999999986 57887665443
No 252
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.69 E-value=9e-08 Score=74.04 Aligned_cols=71 Identities=20% Similarity=0.112 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHcCC---hhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 316 TLTACHLNAAMCLLKLKQ---AKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~---~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
.++.++..+|.+++..++ ..+|...+++||++||+++.+++.+|.+++..|+|++|+..|+++++.+|.++
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 357788999999987776 79999999999999999999999999999999999999999999999999853
No 253
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.65 E-value=1.3e-07 Score=74.85 Aligned_cols=83 Identities=13% Similarity=0.023 Sum_probs=70.6
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE 348 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~ 348 (473)
+..+..+|..+|..++|..|+..|++|++........ ......++.++|.|++++|+++.|+..++++++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~--------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIS--------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC--------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC--------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 4567789999999999999999999999776432110 12356789999999999999999999999999999
Q ss_pred CCCHHHHHHHH
Q psy4385 349 PNNEKAFFRRG 359 (473)
Q Consensus 349 p~~~ka~~~~g 359 (473)
|++..++.+++
T Consensus 77 P~~~~~~~n~~ 87 (104)
T 2v5f_A 77 PEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHhhHH
Confidence 99999988887
No 254
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.64 E-value=2.3e-08 Score=94.70 Aligned_cols=129 Identities=9% Similarity=-0.068 Sum_probs=103.3
Q ss_pred cccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCC--------------CCC-----hhHHHH
Q psy4385 252 EKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDG--------------GFE-----GEQETE 312 (473)
Q Consensus 252 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~--------------~~~-----~~~~~~ 312 (473)
+.+...+.......+..+..+..+|..+...|++++|+..|++++...+... ... ......
T Consensus 134 ~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~ 213 (287)
T 3qou_A 134 TDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVA 213 (287)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHh
Confidence 3344444444455556678899999999999999999999999876544200 000 011234
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 313 RKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN--EKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 313 ~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~--~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
.+|.+..+++++|.++..+|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|...|++++.
T Consensus 214 ~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 214 ENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 577889999999999999999999999999999999998 89999999999999999999999999875
No 255
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.63 E-value=3.6e-08 Score=95.11 Aligned_cols=124 Identities=9% Similarity=-0.024 Sum_probs=111.1
Q ss_pred chhHHHhhHHHHhhcchhhhcc-cHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHc-C-ChhHHH
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQD-KFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKL-K-QAKPAK 338 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl-~-~~~~A~ 338 (473)
....++....+..+|..+...+ .+.+++..+.+++ ..+|.+..+++.++.++.++ + ++++++
T Consensus 81 L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L---------------~~nPKny~aW~hR~wlL~~l~~~~~~~EL 145 (349)
T 3q7a_A 81 VRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFA---------------VQNLKSYQVWHHRLLLLDRISPQDPVSEI 145 (349)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH---------------HTTCCCHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred HHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---------------HhCCCcHHHHHHHHHHHHHhcCCChHHHH
Confidence 3444456778888999998888 5999999999999 66677899999999999998 8 999999
Q ss_pred HHHHHHhhhCCCCHHHHHHHHHHHHhcCCHH--------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4385 339 DQCDKAIELEPNNEKAFFRRGNAYLDLNEPE--------LAEKDFQKVLQIDPNNKAAVQKLTQTKQKLR 400 (473)
Q Consensus 339 ~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~--------~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 400 (473)
..|+++|+.+|.|..||+.|+.++..++.++ ++++.+.++++.+|.|-.++.....+...+.
T Consensus 146 ~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~ 215 (349)
T 3q7a_A 146 EYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRP 215 (349)
T ss_dssp HHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTST
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999888 9999999999999999999999888876654
No 256
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.62 E-value=5.7e-08 Score=85.88 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=91.4
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
....+..+..+|..+...|+|++|+..|.+++.+...... .......++.++|.++..+|++++|+..+.++
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPE--------DPLAASANAYEVATVALHFGDLAGARQEYEKS 133 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC--------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCc--------cHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4456778999999999999999999999999976542110 01245778999999999999999999999999
Q ss_pred hhhCC--CC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q psy4385 345 IELEP--NN----EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDP 383 (473)
Q Consensus 345 l~~~p--~~----~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P 383 (473)
+.+.+ .+ ..++.++|.++..+|++++|+..|++++.+..
T Consensus 134 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 134 LVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 97632 22 34578999999999999999999999998754
No 257
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.62 E-value=1.3e-07 Score=88.46 Aligned_cols=132 Identities=11% Similarity=-0.016 Sum_probs=105.5
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCC
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPN 350 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~ 350 (473)
.....+..+...|+|++|...|..++ ...|... .++.+|.++++.++|.+|+..++.++...+.
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~---------------~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~ 167 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAP---------------VAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDK 167 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSC---------------CTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHH---------------hcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCc
Confidence 33445677888999999999999888 3345556 8899999999999999999999988876422
Q ss_pred -C-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q psy4385 351 -N-EKAFFRRGNAYLDLNEPELAEKDFQKVLQID--PN-NKAAVQKLTQTKQKLREQKIKEKQVYANMFDKFAK 419 (473)
Q Consensus 351 -~-~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~--P~-~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~~~ 419 (473)
. ..++|.+|.++..+|++++|+..|++++.-. |. ...+...++.+...+++.. ..+..|++++..-..
T Consensus 168 ~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~d-eA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 168 FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNES-AAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHSCC
T ss_pred ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhcCCc
Confidence 1 4589999999999999999999999998654 55 5678899999998887654 444567777665443
No 258
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.58 E-value=4.9e-08 Score=76.54 Aligned_cols=69 Identities=14% Similarity=0.122 Sum_probs=62.7
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+..+|..++..|+|++|+..|++++ .++|....+|+++|.|+.++|++++|+..++++++
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al---------------~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELV---------------ETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHH---------------HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 346788999999999999999999999999 66666788999999999999999999999999999
Q ss_pred hCCC
Q psy4385 347 LEPN 350 (473)
Q Consensus 347 ~~p~ 350 (473)
+.|.
T Consensus 70 l~~~ 73 (100)
T 3ma5_A 70 VARE 73 (100)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 9764
No 259
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.58 E-value=2.6e-07 Score=74.58 Aligned_cols=102 Identities=14% Similarity=0.157 Sum_probs=84.1
Q ss_pred ccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhH---HHHHHHHHhhhC-C-CCHHHHHH
Q psy4385 283 DKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKP---AKDQCDKAIELE-P-NNEKAFFR 357 (473)
Q Consensus 283 ~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~---A~~~~~~al~~~-p-~~~ka~~~ 357 (473)
.....+...|.+++. ..+....+.+++|.|+.+..+... +|..+...+..+ | ..-.++|.
T Consensus 15 ~~l~~~~~~y~~e~~---------------~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~ 79 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKA---------------AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFY 79 (126)
T ss_dssp HHHHHHHHHHHHHHH---------------HSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---------------cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 344556666777662 223457789999999999987777 999999999987 5 57789999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4385 358 RGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 358 ~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 399 (473)
+|.+++++|+|++|+.+++.+|+++|+|.++......+..++
T Consensus 80 LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 80 LAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988777776655
No 260
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.56 E-value=3e-07 Score=73.67 Aligned_cols=81 Identities=16% Similarity=0.209 Sum_probs=70.8
Q ss_pred hHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4385 335 KPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMF 414 (473)
Q Consensus 335 ~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 414 (473)
..|+..|+++++.+|+++.+++.+|.+|..+|++++|+..|++++.++|++..++..++.+...+++..++. ..|.+.+
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGAR-QAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH-HHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHH-HHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999999999998876655443 4555555
Q ss_pred hh
Q psy4385 415 DK 416 (473)
Q Consensus 415 ~~ 416 (473)
..
T Consensus 81 ~~ 82 (115)
T 2kat_A 81 AA 82 (115)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 261
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.51 E-value=7.6e-07 Score=74.28 Aligned_cols=98 Identities=16% Similarity=0.066 Sum_probs=84.6
Q ss_pred hcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH----cCChhHHHHHHHHHhhhCCC
Q psy4385 275 RGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK----LKQAKPAKDQCDKAIELEPN 350 (473)
Q Consensus 275 ~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k----l~~~~~A~~~~~~al~~~p~ 350 (473)
+|..++..+.+++|+..|++|.+. .++.+++++|.+|.. .+++++|+.++++|.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~-----------------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL-----------------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT-----------------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 888888888899999999999843 347899999999999 89999999999999987 6
Q ss_pred CHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q psy4385 351 NEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPNNKAAVQKLT 393 (473)
Q Consensus 351 ~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 393 (473)
++.+++++|.+|.. .+++++|+..|++|.+.. +..+...|+
T Consensus 92 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 92 DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 89999999999999 899999999999999874 555555543
No 262
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.51 E-value=6.2e-07 Score=87.62 Aligned_cols=129 Identities=10% Similarity=-0.026 Sum_probs=100.7
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
.+..+..+|..++..|+|+.|...|.+++.+.+.... ......+++++|.++..+|+|++|+..+++++.+
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV---------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4567788899999999999999999999966543110 1233567889999999999999999999999987
Q ss_pred C--------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHHHHHHH
Q psy4385 348 E--------PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN-----KAAVQKLTQTKQKLREQKIK 405 (473)
Q Consensus 348 ~--------p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~-----~~~~~~l~~~~~~~~~~~~~ 405 (473)
. |....++.++|.++...|++++|...+.+++.+.|.. ..++..++.+....++..+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 193 (373)
T 1hz4_A 123 INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNA 193 (373)
T ss_dssp HHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4 3345678889999999999999999999999988753 34566677776666555443
No 263
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.49 E-value=3.3e-07 Score=94.46 Aligned_cols=109 Identities=9% Similarity=0.000 Sum_probs=75.1
Q ss_pred hHHHhhHHHHhhcchhhh-------cccHH-------HHHHHHHHHhh-hhcCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy4385 264 EKLEQGKLLKERGTTYFK-------QDKFE-------LACRNYKKAIP-YLDFDGGFEGEQETERKKTLTACHLNAAMCL 328 (473)
Q Consensus 264 ~~~~~a~~~~~~G~~~~~-------~~~~~-------~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~ 328 (473)
..+.....+...|..+.. .|+++ +|+..|++|+. +.+ .+..+++++|..+
T Consensus 267 ~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p---------------~~~~l~~~~~~~~ 331 (530)
T 2ooe_A 267 VLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLK---------------KNMLLYFAYADYE 331 (530)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCS---------------SCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCc---------------ccHHHHHHHHHHH
Confidence 334556777788888775 68877 99999999995 433 2356677777777
Q ss_pred HHcCChhHHHHHHHHHhhhCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHH
Q psy4385 329 LKLKQAKPAKDQCDKAIELEPNNE-KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKA 387 (473)
Q Consensus 329 ~kl~~~~~A~~~~~~al~~~p~~~-ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~ 387 (473)
.++|++++|+..|+++++++|.++ .+|..++.++.+.|++++|+..|++|++..|.+..
T Consensus 332 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~ 391 (530)
T 2ooe_A 332 ESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHH 391 (530)
T ss_dssp HHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTH
T ss_pred HhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchH
Confidence 777777777777777777777764 46666666666666666666666666665555433
No 264
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.47 E-value=8.5e-07 Score=90.41 Aligned_cols=97 Identities=20% Similarity=0.100 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHH----cCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCC---C
Q psy4385 317 LTACHLNAAMCLLK----LKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPN---N 385 (473)
Q Consensus 317 ~~~~~~nla~~~~k----l~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~---~ 385 (473)
++.+++++|.+|.. .+++++|+.+++++++.. ++.+++++|.+|.. .+++++|+..|++|++.+|+ +
T Consensus 362 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~ 439 (490)
T 2xm6_A 362 EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGT 439 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCC
Confidence 46678888888888 788888888888888764 68888888888887 78888888888888888844 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy4385 386 KAAVQKLTQTKQKLREQKIKEKQVYANMFDKFA 418 (473)
Q Consensus 386 ~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~~ 418 (473)
..+...|+.+.... .....+.++++|.+..
T Consensus 440 ~~a~~~l~~~~~~~---~~~a~~~a~~~~~~~~ 469 (490)
T 2xm6_A 440 ENRNITEKKLTAKQ---LQQAELLSQQYIEKYA 469 (490)
T ss_dssp HHHHHHHTTSCHHH---HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCHhH---HHHHHHHHHHHHHHHH
Confidence 77777777664421 2223335566666543
No 265
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.41 E-value=3.7e-06 Score=86.54 Aligned_cols=114 Identities=12% Similarity=0.114 Sum_probs=95.9
Q ss_pred HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-------cCChh-------HHHHHHHHHhh-hCCC
Q psy4385 286 ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-------LKQAK-------PAKDQCDKAIE-LEPN 350 (473)
Q Consensus 286 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-------l~~~~-------~A~~~~~~al~-~~p~ 350 (473)
.+|+..|++|+ ...|..+.+|+++|..+.. +|+++ +|+..+++|++ ++|+
T Consensus 255 ~~a~~~y~~al---------------~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~ 319 (530)
T 2ooe_A 255 KRVMFAYEQCL---------------LVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK 319 (530)
T ss_dssp HHHHHHHHHHH---------------HHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHHHHH---------------HhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc
Confidence 47888999999 6677789999999999987 79987 99999999997 8999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 351 NEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK-AAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 351 ~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~-~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
+..+|+.+|.++...|++++|...|+++++++|.+. .++..++.+..+.+... ..++.|.+...
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~-~A~~~~~~Al~ 384 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIK-SGRMIFKKARE 384 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHH-HHHHHHHHHHh
Confidence 999999999999999999999999999999999985 57888877766654433 34445555543
No 266
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.35 E-value=3.4e-07 Score=93.06 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=93.8
Q ss_pred hhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH
Q psy4385 263 DEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCD 342 (473)
Q Consensus 263 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 342 (473)
.+.+..+..+.++|..|..+|+|++|+..|++++.+...... .-+|..+..++|+|.+|..+|+|++|+..|.
T Consensus 345 ~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG-------~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~ 417 (490)
T 3n71_A 345 DTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYH-------HNNAQLGMAVMRAGLTNWHAGHIEVGHGMIC 417 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC-------TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 445678889999999999999999999999999976543211 2256788999999999999999999999999
Q ss_pred HHhhh-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 343 KAIEL-----EPNN---EKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 343 ~al~~-----~p~~---~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
+|+++ .|++ ...+-.+++++..++.|.+|...|.++.+
T Consensus 418 ~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 418 KAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99976 4555 46677899999999999999999988854
No 267
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.31 E-value=2.1e-06 Score=83.82 Aligned_cols=137 Identities=9% Similarity=-0.073 Sum_probs=104.3
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..+..+...|..++..|++++|+..+++++...+... ......+++++|.++...|+++.|+..+.+++.
T Consensus 12 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 81 (373)
T 1hz4_A 12 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGW----------FYSRIVATSVLGEVLHCKGELTRSLALMQQTEQ 81 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCc----------hhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 3456677789999999999999999999997664210 123456889999999999999999999999998
Q ss_pred hCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 347 LEPNN------EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDP--------NNKAAVQKLTQTKQKLREQKIKEKQVYAN 412 (473)
Q Consensus 347 ~~p~~------~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P--------~~~~~~~~l~~~~~~~~~~~~~~k~~~~~ 412 (473)
+.|.. ..+++++|.++...|+|++|+..|++++.+.+ ....++..++.+....++..+... .+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~ 160 (373)
T 1hz4_A 82 MARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEA-SARS 160 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHH-HHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHH-HHHH
Confidence 86543 24578999999999999999999999999853 234456667777766655544432 3444
Q ss_pred Hh
Q psy4385 413 MF 414 (473)
Q Consensus 413 ~f 414 (473)
.+
T Consensus 161 al 162 (373)
T 1hz4_A 161 GI 162 (373)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 268
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.29 E-value=2.9e-06 Score=84.59 Aligned_cols=84 Identities=19% Similarity=0.371 Sum_probs=74.1
Q ss_pred CCCCCCCeEEEEEEeeeCCeEEEe---ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCC
Q psy4385 161 STPKDGANVEITLKGECEGKVFQE---GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVP 237 (473)
Q Consensus 161 ~~p~~~~~v~~~~~g~~~g~~~~~---~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip 237 (473)
..+..|+.|++||.|+.+|+.|++ .++.|.+|.|. +++||+.+|.+|+.|++..|.+++..+|+..+.
T Consensus 156 ~~~~~gD~V~i~y~g~~dG~~fd~~~~~~~~~~lG~g~---~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l------ 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGR---MIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL------ 226 (432)
T ss_dssp SCCCTTCEEEECEEEESSSCBCSSCCCSSEEEETTSCC---SCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT------
T ss_pred CCCCCCCEEEEEEEEeeCCeEccCCCccceEEEeCCCC---cchHHHHHhCCCCCCCEEEEEECCchhhCCCCC------
Confidence 458899999999999999999997 38899999987 999999999999999999999999999987653
Q ss_pred CCCCceeeeeeccccc
Q psy4385 238 SNKPATYTITMNNFEK 253 (473)
Q Consensus 238 ~~~~~~y~i~L~~~~~ 253 (473)
++..+.|.+.+..+..
T Consensus 227 ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 227 KGKAAKFAINLKKVEE 242 (432)
T ss_dssp SSCEEEEEEECCEECC
T ss_pred CCceEEEEEEEEEEec
Confidence 3467899999887755
No 269
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.23 E-value=1e-05 Score=82.28 Aligned_cols=109 Identities=16% Similarity=0.102 Sum_probs=74.2
Q ss_pred hhHHHHhhcchhhh----cccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH----cCChhHHHH
Q psy4385 268 QGKLLKERGTTYFK----QDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK----LKQAKPAKD 339 (473)
Q Consensus 268 ~a~~~~~~G~~~~~----~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k----l~~~~~A~~ 339 (473)
.+..+..+|..++. .+++.+|+..|++++.. .++.+++++|.+|.. .+++++|+.
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~-----------------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~ 100 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ-----------------GYTPAEYVLGLRYMNGEGVPQDYAQAVI 100 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----------------TCHHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence 45677888888887 88999999999998843 224566666666666 666667777
Q ss_pred HHHHHhhhCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 340 QCDKAIELEPNNEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 340 ~~~~al~~~p~~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
+|.++++. .++.+++++|.+|.. .+++++|+..|+++... .+..+...|+.++.
T Consensus 101 ~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 158 (490)
T 2xm6_A 101 WYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYF 158 (490)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 66666654 356666666666666 66666666666666553 45566666665554
No 270
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.22 E-value=9.1e-06 Score=65.66 Aligned_cols=84 Identities=13% Similarity=0.151 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHcCCh---hHHHHHHHHHhhhCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQA---KPAKDQCDKAIELEPN-NEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKL 392 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~---~~A~~~~~~al~~~p~-~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l 392 (473)
.+...+|+|.|+.+..+. ..+|..++..+..+|. .-..+|.+|.+++++|+|++|+++.+.+|+++|+|..+....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 366889999999998754 5789999999998884 468999999999999999999999999999999999998887
Q ss_pred HHHHHHHH
Q psy4385 393 TQTKQKLR 400 (473)
Q Consensus 393 ~~~~~~~~ 400 (473)
..+..++.
T Consensus 119 ~~Ie~ki~ 126 (134)
T 3o48_A 119 SMVEDKIQ 126 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776663
No 271
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.20 E-value=7.4e-06 Score=90.65 Aligned_cols=110 Identities=17% Similarity=0.147 Sum_probs=93.1
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC-
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP- 349 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p- 349 (473)
.+...|..++..|+|.+|+..|.+|- .|..+|.|+.++|+|+.|++.+.+|...++
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~aW 1253 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANSTRTW 1253 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 56679999999999999999999874 678899999999999999999999965543
Q ss_pred ------------------------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4385 350 ------------------------NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQK 403 (473)
Q Consensus 350 ------------------------~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 403 (473)
.++..+..++..|...|.|++|+..|+++|.++|.+.....+|+.++.+.+-.+
T Consensus 1254 kev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~pek 1331 (1630)
T 1xi4_A 1254 KEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQK 1331 (1630)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCCHHH
Confidence 244556677888999999999999999999999999999999988887654333
No 272
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.18 E-value=4.9e-06 Score=83.98 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=88.2
Q ss_pred HHHHhhcchhhhcc---cHHHHHHHHHHHhhhhcCCCC----------------CChh-----HHHHHHHHHHHHHHHHH
Q psy4385 270 KLLKERGTTYFKQD---KFELACRNYKKAIPYLDFDGG----------------FEGE-----QETERKKTLTACHLNAA 325 (473)
Q Consensus 270 ~~~~~~G~~~~~~~---~~~~A~~~y~~al~~~~~~~~----------------~~~~-----~~~~~~~~~~~~~~nla 325 (473)
.++..+|..+...| ++.+|+..|++++..-+.... .+.+ -.... +.++.+++++|
T Consensus 177 ~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~~~a~~~Lg 255 (452)
T 3e4b_A 177 ICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWVSLA 255 (452)
T ss_dssp THHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGSTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCCHHHHHHHH
Confidence 36778899999999 999999999999865332111 1111 01122 56677788888
Q ss_pred HH-H--HHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 326 MC-L--LKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLN-----EPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 326 ~~-~--~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg-----~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
.+ + ...+++++|+.+|.++++.+ ++.+++++|.+|. .| ++++|+..|++|. |.+..+...|+.++.
T Consensus 256 ~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~ 329 (452)
T 3e4b_A 256 QLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYR 329 (452)
T ss_dssp HHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHH
Confidence 87 3 45778888888888887654 7888888888887 55 8888888888887 778888888887765
Q ss_pred H
Q psy4385 398 K 398 (473)
Q Consensus 398 ~ 398 (473)
.
T Consensus 330 ~ 330 (452)
T 3e4b_A 330 R 330 (452)
T ss_dssp T
T ss_pred C
Confidence 4
No 273
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.18 E-value=2.3e-05 Score=64.19 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHcCCh---hHHHHHHHHHhhhCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQA---KPAKDQCDKAIELEPN-NEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKL 392 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~---~~A~~~~~~al~~~p~-~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l 392 (473)
.....+|+|.|+.+..+. .++|..++..+..+|. .-..+|.+|.+++++|+|++|+++++.+|+++|+|.++....
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 366889999999998864 4799999999998884 568999999999999999999999999999999999998776
Q ss_pred HHHHHHH
Q psy4385 393 TQTKQKL 399 (473)
Q Consensus 393 ~~~~~~~ 399 (473)
..+..++
T Consensus 118 ~~Ie~~i 124 (144)
T 1y8m_A 118 SMVEDKI 124 (144)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666544
No 274
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.15 E-value=5.1e-06 Score=82.23 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=69.1
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC-
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP- 349 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p- 349 (473)
.+...|..++..|+|++|+..|.++- .|.++|.|+.++|+|+.|++.+.++. +|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a~-----------------------n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~ 178 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKAN--STR 178 (449)
T ss_dssp -------------CTTTHHHHHHHTT-----------------------CHHHHHHHHHTTTCHHHHHHHHHHHT--CHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhh-----------------------hHHHHHHHHHHhccHHHHHHHHHHcC--Cch
Confidence 67777888888888888888877663 45667777777777777777777772 11
Q ss_pred --------------------------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4385 350 --------------------------NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLRE 401 (473)
Q Consensus 350 --------------------------~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 401 (473)
.++.-+..+..+|.+.|+|++|+..|++++.+++.+..+...|+.+..+.+-
T Consensus 179 ~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p 256 (449)
T 1b89_A 179 TWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKP 256 (449)
T ss_dssp HHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCH
Confidence 1122233445788899999999999999999999999999999988876643
No 275
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.13 E-value=5.8e-06 Score=83.44 Aligned_cols=109 Identities=14% Similarity=0.038 Sum_probs=91.6
Q ss_pred HHhhHHHHhhcch-h--hhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC-----ChhHH
Q psy4385 266 LEQGKLLKERGTT-Y--FKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK-----QAKPA 337 (473)
Q Consensus 266 ~~~a~~~~~~G~~-~--~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~-----~~~~A 337 (473)
...+..+.++|.. + ...+++.+|+..|++|+.. .++.+++++|.+|. .| ++.+|
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~-----------------g~~~A~~~Lg~~y~-~G~g~~~d~~~A 306 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA-----------------DQPRAELLLGKLYY-EGKWVPADAKAA 306 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT-----------------TCHHHHHHHHHHHH-HCSSSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC-----------------CCHHHHHHHHHHHH-cCCCCCCCHHHH
Confidence 4566778888887 4 5788999999999999832 35779999999998 55 99999
Q ss_pred HHHHHHHhhhCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 338 KDQCDKAIELEPNNEKAFFRRGNAYLD----LNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 338 ~~~~~~al~~~p~~~ka~~~~g~a~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
+.+|.+|+ +.++.+++++|.+|.. ..++++|+..|++|.+. .+..+...|+.++.
T Consensus 307 ~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 365 (452)
T 3e4b_A 307 EAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--GQNSADFAIAQLFS 365 (452)
T ss_dssp HHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--TCTTHHHHHHHHHH
T ss_pred HHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--ChHHHHHHHHHHHH
Confidence 99999999 8999999999999987 45999999999999874 56777888888765
No 276
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.11 E-value=1.1e-05 Score=74.74 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=77.9
Q ss_pred cccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHH--HHHHHHHHHHHHHHc-----CChhHHHHHHHHHhhhCCCC-HH
Q psy4385 282 QDKFELACRNYKKAIPYLDFDGGFEGEQETERKKT--LTACHLNAAMCLLKL-----KQAKPAKDQCDKAIELEPNN-EK 353 (473)
Q Consensus 282 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~kl-----~~~~~A~~~~~~al~~~p~~-~k 353 (473)
.+....|....++|+ +++|. ...+|.-+|..|.+. |+.++|..++++||+++|+. +.
T Consensus 176 l~~l~~A~a~lerAl---------------eLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id 240 (301)
T 3u64_A 176 PDTVHAAVMMLERAC---------------DLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPD 240 (301)
T ss_dssp HHHHHHHHHHHHHHH---------------HHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSH
T ss_pred HHhHHHHHHHHHHHH---------------HhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCch
Confidence 344577888888888 55665 677999999999996 99999999999999999975 99
Q ss_pred HHHHHHHHHHhc-CCHHHHHHHHHHHHhcCCCC
Q psy4385 354 AFFRRGNAYLDL-NEPELAEKDFQKVLQIDPNN 385 (473)
Q Consensus 354 a~~~~g~a~~~l-g~~~~A~~~~~~al~l~P~~ 385 (473)
+++.+|..+... +++++|.+.|++|+..+|..
T Consensus 241 ~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 241 HHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 999999999884 99999999999999998873
No 277
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.10 E-value=1.4e-05 Score=66.88 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=65.8
Q ss_pred hhHHHHhhcchhhhcc---cHHHHHHHHHHHhhhhcCCCCCChhHHHHHH-H-HHHHHHHHHHHHHHHcCChhHHHHHHH
Q psy4385 268 QGKLLKERGTTYFKQD---KFELACRNYKKAIPYLDFDGGFEGEQETERK-K-TLTACHLNAAMCLLKLKQAKPAKDQCD 342 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~---~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~-~-~~~~~~~nla~~~~kl~~~~~A~~~~~ 342 (473)
..+...+.|.++.+.. ++.+++..++..+ ... | .+..+++++|..|+++++|++|+.+++
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll---------------~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~ 95 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELL---------------PKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVR 95 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH---------------HHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH---------------hcCCccchHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 3456777888888877 7789999999998 333 4 568899999999999999999999999
Q ss_pred HHhhhCCCCHHHHHHHHH
Q psy4385 343 KAIELEPNNEKAFFRRGN 360 (473)
Q Consensus 343 ~al~~~p~~~ka~~~~g~ 360 (473)
++|+++|+|..|..-+-.
T Consensus 96 ~lL~ieP~n~QA~~Lk~~ 113 (152)
T 1pc2_A 96 GLLQTEPQNNQAKELERL 113 (152)
T ss_dssp HHHHHCTTCHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHH
Confidence 999999999988755443
No 278
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.09 E-value=1.3e-05 Score=66.65 Aligned_cols=94 Identities=16% Similarity=0.113 Sum_probs=81.9
Q ss_pred cccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHH
Q psy4385 282 QDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNA 361 (473)
Q Consensus 282 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a 361 (473)
.+++.+|+..|+++.+.-. +.++ +|.+|.....+++|+.+++++.+. .++.+++++|.+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~-----------------~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~ 66 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNE-----------------MFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDF 66 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTC-----------------TTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCC-----------------Hhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 4689999999999984422 2233 999999999999999999999987 689999999999
Q ss_pred HHh----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4385 362 YLD----LNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQK 398 (473)
Q Consensus 362 ~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 398 (473)
|.. .+++++|+..|++|.+. .++.+...|+.++..
T Consensus 67 y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 67 YENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 999 89999999999999987 678999999998865
No 279
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.04 E-value=4.4e-05 Score=73.55 Aligned_cols=114 Identities=11% Similarity=0.069 Sum_probs=77.8
Q ss_pred HHhhcchhhh---cccHHHHHHHHHHHhhhhcCCCC-----------------CChhHHH------------HHHHHHHH
Q psy4385 272 LKERGTTYFK---QDKFELACRNYKKAIPYLDFDGG-----------------FEGEQET------------ERKKTLTA 319 (473)
Q Consensus 272 ~~~~G~~~~~---~~~~~~A~~~y~~al~~~~~~~~-----------------~~~~~~~------------~~~~~~~~ 319 (473)
++-+|..++. ...+.+|+.+|++|+.+.|.... ....... ...+..+.
T Consensus 199 l~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~ 278 (372)
T 3ly7_A 199 NFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSI 278 (372)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHH
Confidence 3344444443 35568999999999977665111 1111111 11234455
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
+|.-+|..++..|+++.|+..+++|+.++|+ .-+|..+|.++...|++++|++.|.+|+.++|..+
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 6666777777778888888888888888864 66777888888888888888888888888888764
No 280
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.03 E-value=7.6e-06 Score=81.51 Aligned_cols=87 Identities=10% Similarity=0.106 Sum_probs=69.7
Q ss_pred CCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCccchhHHHHhccCCCCcEEEEEecCCCCcCCCCCCCCCCCC
Q psy4385 45 TPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQVIKAWDRGIATMKKDEVAVFTCKPEYAYGKQGSPPTIPPD 124 (473)
Q Consensus 45 ~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~~~~g~~~~l~~m~~Ge~~~v~i~~~~ayg~~g~~~~ip~~ 124 (473)
.++.||.|+|+|+++. ||..|+++. +.++.+.+|.+. + |+.+|.||++|+...|.+.. +|
T Consensus 154 ~a~~gD~V~id~~~~~-dG~~~~~~~--~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF--------------aG 213 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-EEGKKLTSR--EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY--------------EG 213 (433)
T ss_dssp CCCTTSEEEEEEEEEC-TTSCEEEEE--EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------TT
T ss_pred ccCCCCEEEEEEEEEE-CCEECcCCC--CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------CC
Confidence 4788999999999985 999999863 357888888876 4 99999999999999999853 46
Q ss_pred CceEEEEEEEeeeeccCCCCCCCCceEE
Q psy4385 125 STLVFEVEMISWEAEDISPTHDGGIRRE 152 (473)
Q Consensus 125 ~~l~~~v~l~~~~~~~~~~~~d~~i~k~ 152 (473)
.+..|.|+|.+|....++ +-|..+.+.
T Consensus 214 k~a~F~VtV~~Ik~~~lP-EldDEfak~ 240 (433)
T 3gty_X 214 KKYTYKLEVEEVYKRTLP-EIGDELAKS 240 (433)
T ss_dssp EEEEEEEEEEEEEEECCC-CSSHHHHHT
T ss_pred CeEEEEEEEEEEEEecCC-cccHHHHHH
Confidence 789999999999876555 344444443
No 281
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=2.7e-05 Score=77.27 Aligned_cols=119 Identities=11% Similarity=0.016 Sum_probs=86.1
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCC------------------CChhHHHHH-------------H
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGG------------------FEGEQETER-------------K 314 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~------------------~~~~~~~~~-------------~ 314 (473)
.....++.++|..|+..|+|++|+..|.+++.+.+.... ...+..... .
T Consensus 52 ~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 131 (434)
T 4b4t_Q 52 NEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRV 131 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCC
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCcc
Confidence 344567889999999999999999999999877654211 111111100 1
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q psy4385 315 KTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL------EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN 384 (473)
Q Consensus 315 ~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~------~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~ 384 (473)
.....++.++|.+|..+|+|.+|+..+.+++.. .+..+.++...|.+|..+|+|++|...|++++.+.+.
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 132 FLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 123567788888888888888888888888765 2334567888888888888888888888888888643
No 282
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.89 E-value=3.4e-05 Score=85.51 Aligned_cols=107 Identities=15% Similarity=-0.013 Sum_probs=83.9
Q ss_pred HhhcchhhhcccHHHHHHHHHHHhhhhcCCC-----CCChhHHH--HHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 273 KERGTTYFKQDKFELACRNYKKAIPYLDFDG-----GFEGEQET--ERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 273 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~-----~~~~~~~~--~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
.+.|..+...|.|++|...|+++-....... ..+.+... ..+.....+|+++|.++.+.|++++|++.|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 3468999999999999999999863322100 00011100 123355789999999999999999999999876
Q ss_pred hhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC
Q psy4385 346 ELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN 384 (473)
Q Consensus 346 ~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~ 384 (473)
+++.+|++.|.++.++|+|++|+++|..|.+.+++
T Consensus 1132 ----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999988855
No 283
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=97.87 E-value=4.9e-06 Score=81.75 Aligned_cols=84 Identities=19% Similarity=0.312 Sum_probs=70.2
Q ss_pred CCCCCCCeEEEEEEeeeCCeEEEe---ceeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCC
Q psy4385 161 STPKDGANVEITLKGECEGKVFQE---GTFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVP 237 (473)
Q Consensus 161 ~~p~~~~~v~~~~~g~~~g~~~~~---~~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip 237 (473)
..+..|+.|++||.|+.+|..|++ .++.|.+|.|. +++||+.+|.+|+.|++..+.++....|+..+.
T Consensus 159 ~~~~~gD~V~i~y~g~~dG~~fd~~~~~~~~~~lG~g~---~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l------ 229 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSIDGVEFEGGKAENFPLEMGAGR---MIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL------ 229 (392)
T ss_dssp CCCCTTCEEEEEEEEESSSSCCTTCEEEEEEEETTSCC---BSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT------
T ss_pred CCCCCCCEEEEEEEEEECCEEccCCCccceEEEecCCC---cchhHHHHhCCCCCCCEEEEEEeCccccccCCC------
Confidence 458899999999999999999986 48899999998 999999999999999999999974445654332
Q ss_pred CCCCceeeeeeccccc
Q psy4385 238 SNKPATYTITMNNFEK 253 (473)
Q Consensus 238 ~~~~~~y~i~L~~~~~ 253 (473)
++..+.|.+.+..+..
T Consensus 230 aGk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 230 KGKAAKFAIKVNKVEA 245 (392)
T ss_dssp SSCEEEECCCEEEEEE
T ss_pred CCCeEEEEEEEEEEEc
Confidence 4568899999887755
No 284
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=2.4e-05 Score=77.70 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=69.6
Q ss_pred HHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC
Q psy4385 272 LKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN 351 (473)
Q Consensus 272 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~ 351 (473)
+..+|..++..|+|.+|+..+++++...... .-++....++.+++.+|..+++|.+|...+++++.+.+..
T Consensus 138 ~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 138 SIKLATLHYQKKQYKDSLALINDLLREFKKL---------DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS---------SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHccChHHHHHHHHHHHHHHHhc---------ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 3456666677777777777777766443321 1245677899999999999999999999999999886554
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 352 EKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 352 ~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
.......+..+...|.+..+..+|..|..
T Consensus 209 ~~~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 209 YCPTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 44445566666666666655555655543
No 285
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.78 E-value=0.00013 Score=68.86 Aligned_cols=128 Identities=10% Similarity=-0.065 Sum_probs=88.9
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCC--------------C-Chh---HH---HHHHHH----HHHHHHHHH
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGG--------------F-EGE---QE---TERKKT----LTACHLNAA 325 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~--------------~-~~~---~~---~~~~~~----~~~~~~nla 325 (473)
.+.-.|..++..|++++|++.+.++|...+.... . .+. .. ...++. .-.+..+++
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~La 181 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLA 181 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHH
Confidence 3457788888899999999999988654321000 0 010 11 122231 134455555
Q ss_pred HH--HHHcC--ChhHHHHHHHHHhhhCCC--CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----------CCCCHHHH
Q psy4385 326 MC--LLKLK--QAKPAKDQCDKAIELEPN--NEKAFFRRGNAYLDLNEPELAEKDFQKVLQI----------DPNNKAAV 389 (473)
Q Consensus 326 ~~--~~kl~--~~~~A~~~~~~al~~~p~--~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l----------~P~~~~~~ 389 (473)
.. .+..| ++..|...|+++....|+ ....+++ +++.+|+|++|...++.++++ +|+|+.+.
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~L 258 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFL 258 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHH
Confidence 44 66667 999999999999988887 3455566 899999999999999988887 58899998
Q ss_pred HHHHHHHHHHHH
Q psy4385 390 QKLTQTKQKLRE 401 (473)
Q Consensus 390 ~~l~~~~~~~~~ 401 (473)
.++..+...+++
T Consensus 259 aN~i~l~~~lgk 270 (310)
T 3mv2_B 259 ANQITLALMQGL 270 (310)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHhCh
Confidence 777666666543
No 286
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.75 E-value=0.00011 Score=69.48 Aligned_cols=93 Identities=10% Similarity=0.054 Sum_probs=70.9
Q ss_pred HHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC--CCHHHHHHHHHHHHhc
Q psy4385 288 ACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP--NNEKAFFRRGNAYLDL 365 (473)
Q Consensus 288 A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p--~~~ka~~~~g~a~~~l 365 (473)
|+..+++.+..-. .....+..+|.++...|++++|+..|.++|..+| .+..++...+++++.+
T Consensus 85 a~~~l~~l~~~~~---------------~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~ 149 (310)
T 3mv2_B 85 NIEELENLLKDKQ---------------NSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLN 149 (310)
T ss_dssp CCHHHHHTTTTSC---------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCC---------------CCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHC
Confidence 7777877763211 1123446788888999999999999999988887 7889999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCC----CHHHHHHHHHH
Q psy4385 366 NEPELAEKDFQKVLQIDPN----NKAAVQKLTQT 395 (473)
Q Consensus 366 g~~~~A~~~~~~al~l~P~----~~~~~~~l~~~ 395 (473)
|+.+.|.+.+++..+.+|+ +..+...|...
T Consensus 150 ~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea 183 (310)
T 3mv2_B 150 NNVSTASTIFDNYTNAIEDTVSGDNEMILNLAES 183 (310)
T ss_dssp TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCccccccchHHHHHHHHH
Confidence 9999999999999888883 33444555544
No 287
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.70 E-value=0.00015 Score=61.01 Aligned_cols=118 Identities=8% Similarity=-0.043 Sum_probs=86.2
Q ss_pred HHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC--
Q psy4385 272 LKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP-- 349 (473)
Q Consensus 272 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p-- 349 (473)
+.+....++..+.|+.|+-.+..++.+.+.+..... -.....++..+|.+++..++|..|...|++||++.-
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 445556688899999999999998876644322100 123466889999999999999999999999986521
Q ss_pred -C----------------------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 350 -N----------------------NEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 350 -~----------------------~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
. .....|+.+.||.+++++++|+..++.+-.. -..+.+.-.|++++
T Consensus 97 ~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k-~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 97 SKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSR-QRTPKINMLLANLY 165 (167)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGG-GCCHHHHHHHHHHC
T ss_pred hcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCch-hcCHHHHHHHHHHh
Confidence 1 1257799999999999999999998754222 13456666666553
No 288
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.70 E-value=5.4e-05 Score=58.19 Aligned_cols=68 Identities=15% Similarity=0.006 Sum_probs=60.1
Q ss_pred hHHHHhhcchhhhccc---HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 269 GKLLKERGTTYFKQDK---FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~---~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
+..+...|.+++..++ ..+|...+++|+ .++|.++.+++.+|..+++.|+|++|+.++++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL---------------~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQAL---------------QLEPYNEAALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHH---------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH---------------HHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5567777888865555 799999999999 7788889999999999999999999999999999
Q ss_pred hhCCCC
Q psy4385 346 ELEPNN 351 (473)
Q Consensus 346 ~~~p~~ 351 (473)
+.+|..
T Consensus 71 ~~~p~~ 76 (93)
T 3bee_A 71 DSNDPN 76 (93)
T ss_dssp TCCCTT
T ss_pred hhCCCC
Confidence 999984
No 289
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.63 E-value=7.4e-05 Score=69.19 Aligned_cols=116 Identities=11% Similarity=0.036 Sum_probs=83.6
Q ss_pred cHHHHHHHHHHHhhhhcC----C-CC-------CC----hhHHHHHHHHHHHHHHHHHHHHHH---c--C------ChhH
Q psy4385 284 KFELACRNYKKAIPYLDF----D-GG-------FE----GEQETERKKTLTACHLNAAMCLLK---L--K------QAKP 336 (473)
Q Consensus 284 ~~~~A~~~y~~al~~~~~----~-~~-------~~----~~~~~~~~~~~~~~~~nla~~~~k---l--~------~~~~ 336 (473)
++.+|...|.++.++... . .. .+ ++.....++..+.+++-.|..... + + ....
T Consensus 102 ~~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~ 181 (301)
T 3u64_A 102 AYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHA 181 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHH
Confidence 466777777777765322 0 11 01 111223345556666666666543 2 2 3578
Q ss_pred HHHHHHHHhhhCCC--CHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHH
Q psy4385 337 AKDQCDKAIELEPN--NEKAFFRRGNAYLDL-----NEPELAEKDFQKVLQIDPNN-KAAVQKLTQTKQKL 399 (473)
Q Consensus 337 A~~~~~~al~~~p~--~~ka~~~~g~a~~~l-----g~~~~A~~~~~~al~l~P~~-~~~~~~l~~~~~~~ 399 (473)
|....++|+++||+ +..+|..+|..|..+ |+.+.|...|++|++++|+. ..++..++......
T Consensus 182 A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~ 252 (301)
T 3u64_A 182 AVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIP 252 (301)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHh
Confidence 99999999999999 667999999999996 99999999999999999975 88888888876543
No 290
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.60 E-value=5.1e-05 Score=75.78 Aligned_cols=95 Identities=9% Similarity=-0.060 Sum_probs=76.1
Q ss_pred hhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH
Q psy4385 263 DEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCD 342 (473)
Q Consensus 263 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 342 (473)
.+.+..+..+.++|..|..+|+|++|+..|++++.+.....+ ..+|..+..++|+|.+|..+|+|++|+..+.
T Consensus 323 ~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg-------~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~ 395 (429)
T 3qwp_A 323 DINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFP-------GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLR 395 (429)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC-------SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcC-------CCChHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 455678899999999999999999999999999976543221 2256788999999999999999999999999
Q ss_pred HHhhh-----CCCCH---HHHHHHHHHHHh
Q psy4385 343 KAIEL-----EPNNE---KAFFRRGNAYLD 364 (473)
Q Consensus 343 ~al~~-----~p~~~---ka~~~~g~a~~~ 364 (473)
+|+++ .|+++ ..+.+++.++..
T Consensus 396 ~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 396 LAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 99976 45554 445566666544
No 291
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.55 E-value=4.7e-05 Score=75.30 Aligned_cols=122 Identities=14% Similarity=0.062 Sum_probs=54.2
Q ss_pred ccccccccccccCchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q psy4385 249 NNFEKIKDTWQLNSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCL 328 (473)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~ 328 (473)
..++.+...+.+..+. ...+....+++..+.+.|++.++...|+. .+...+.++|.++
T Consensus 75 g~~EeAi~yl~~ark~-~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~---------------------pn~~a~~~IGd~~ 132 (449)
T 1b89_A 75 GNWEELVKYLQMARKK-ARESYVETELIFALAKTNRLAELEEFING---------------------PNNAHIQQVGDRC 132 (449)
T ss_dssp -----------------------------------CHHHHTTTTTC---------------------C------------
T ss_pred CCHHHHHHHHHHHHHh-CccchhHHHHHHHHHHhCCHHHHHHHHcC---------------------CcHHHHHHHHHHH
Confidence 3444444444444432 22234455566666666666666655432 1234899999999
Q ss_pred HHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q psy4385 329 LKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKIK 405 (473)
Q Consensus 329 ~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 405 (473)
...|.|++|+.+|+++ ..|.++|.|+.++|+|++|++.+++| ++..++..+..+....++.+.+
T Consensus 133 ~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA 196 (449)
T 1b89_A 133 YDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLA 196 (449)
T ss_dssp ----CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHH
Confidence 9999999999999987 57899999999999999999999999 4566766665555544433333
No 292
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.47 E-value=9.8e-05 Score=73.69 Aligned_cols=84 Identities=12% Similarity=0.059 Sum_probs=69.6
Q ss_pred hhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHH
Q psy4385 263 DEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCD 342 (473)
Q Consensus 263 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 342 (473)
.+.+..+..+.++|..|..+|+|++|+..|++++.+...... .-+|..+..++|+|.+|..+|+|++|+..++
T Consensus 334 ~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG-------~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~ 406 (433)
T 3qww_A 334 DSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYP-------VYSLNVASMWLKLGRLYMGLENKAAGEKALK 406 (433)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC-------SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcC-------CCChHHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 445677889999999999999999999999999976543211 1256788899999999999999999999999
Q ss_pred HHhhh-----CCCCHH
Q psy4385 343 KAIEL-----EPNNEK 353 (473)
Q Consensus 343 ~al~~-----~p~~~k 353 (473)
+|+++ .|+++.
T Consensus 407 ~Al~i~~~~lG~~Hp~ 422 (433)
T 3qww_A 407 KAIAIMEVAHGKDHPY 422 (433)
T ss_dssp HHHHHHHHHTCTTCHH
T ss_pred HHHHHHHHHcCCCChH
Confidence 99976 466653
No 293
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.22 E-value=0.0015 Score=52.57 Aligned_cols=77 Identities=14% Similarity=0.031 Sum_probs=56.3
Q ss_pred HHHHhhcchhhhcccHHH---HHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 270 KLLKERGTTYFKQDKFEL---ACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 270 ~~~~~~G~~~~~~~~~~~---A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
....+.+.++.+..+... ++..++..++-.. ....-.+++.+|..++++|+|..|+.+|+.+|+
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~-------------p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC-------------cchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 344555666665555444 7777776663210 014677899999999999999999999999999
Q ss_pred hCCCCHHHHHHHH
Q psy4385 347 LEPNNEKAFFRRG 359 (473)
Q Consensus 347 ~~p~~~ka~~~~g 359 (473)
++|+|..|.--+.
T Consensus 103 ~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 103 TEPQNNQAKELER 115 (126)
T ss_dssp HCTTCHHHHHHHH
T ss_pred hCCCCHHHHHHHH
Confidence 9999998865443
No 294
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.18 E-value=0.0062 Score=59.77 Aligned_cols=112 Identities=16% Similarity=0.040 Sum_probs=92.5
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCC-------CChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGG-------FEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQC 341 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~-------~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~ 341 (473)
...+...|......++...|...+.+|+.+...... +...+...+......+...++.+++.+|++..|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 344555566666778999999999999987654221 1134456777888888999999999999999999999
Q ss_pred HHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 342 DKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 342 ~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
..++..+|-+..+|..+-.+|...|+..+|++.|+++-+
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987743
No 295
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.72 E-value=0.0054 Score=49.49 Aligned_cols=44 Identities=23% Similarity=0.181 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHH
Q psy4385 316 TLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRG 359 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g 359 (473)
..-.+++.+|..++++|+|..|..+++.+|+++|+|..|.--+.
T Consensus 76 ~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 76 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 46779999999999999999999999999999999998865443
No 296
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.54 E-value=0.0024 Score=67.28 Aligned_cols=98 Identities=9% Similarity=0.080 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHhhh-CCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 319 ACHLNAAMCLLKLKQAKPAKDQCDKAIEL-EPNNEKAFFRRGNAYLDLNE-PELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 319 ~~~~nla~~~~kl~~~~~A~~~~~~al~~-~p~~~ka~~~~g~a~~~lg~-~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
.+|...+.+..+.++.+.|...+.+|++. .+...+.|...+..-...++ ++.|...|+++++..|+++..+..+....
T Consensus 435 ~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe 514 (679)
T 4e6h_A 435 YVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL 514 (679)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 35666666666667777777777777766 44445666666665555543 77777777777777777777665444443
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q psy4385 397 QKLREQKIKEKQVYANMFDKF 417 (473)
Q Consensus 397 ~~~~~~~~~~k~~~~~~f~~~ 417 (473)
..++ ..+..+..|.+.....
T Consensus 515 ~~~~-~~~~AR~lferal~~~ 534 (679)
T 4e6h_A 515 IYVN-EESQVKSLFESSIDKI 534 (679)
T ss_dssp HHHT-CHHHHHHHHHHHTTTS
T ss_pred HhCC-CHHHHHHHHHHHHHhc
Confidence 3332 1233344444444333
No 297
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.52 E-value=0.019 Score=60.55 Aligned_cols=82 Identities=11% Similarity=-0.038 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHH-HHHHHHhhhCCCCHHHHHHHHHHHH
Q psy4385 285 FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAK-DQCDKAIELEPNNEKAFFRRGNAYL 363 (473)
Q Consensus 285 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~-~~~~~al~~~p~~~ka~~~~g~a~~ 363 (473)
..+....|++|+ ...|....+|+..|..+...++.+.|+ ..+.+|+...|.+...|+.++....
T Consensus 325 ~~Rv~~~Ye~aL---------------~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee 389 (679)
T 4e6h_A 325 KARMTYVYMQAA---------------QHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYE 389 (679)
T ss_dssp HHHHHHHHHHHH---------------HHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---------------HHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 345667788888 444556889999999999999999997 9999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhc
Q psy4385 364 DLNEPELAEKDFQKVLQI 381 (473)
Q Consensus 364 ~lg~~~~A~~~~~~al~l 381 (473)
..|+++.|...|++++..
T Consensus 390 ~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 390 LNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 999999999999999975
No 298
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.51 E-value=0.026 Score=46.53 Aligned_cols=114 Identities=12% Similarity=0.033 Sum_probs=87.7
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHh
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAI 345 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al 345 (473)
...+..+-..|+-+-. +-..+-+..|++|+..++... .......+.++.+.|.. ..+++.++|.+.|+.++
T Consensus 17 ~~yl~llE~~g~p~~d-~~l~rlrd~YerAia~~Pp~k-------~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 17 LSLLLKLEKNSVPLSD-ALLNKLIGRYSQAIEALPPDK-------YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMAR 87 (161)
T ss_dssp HHHHHHHHHHTCSCCH-HHHHHHHHHHHHHHHHSCGGG-------GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHH
T ss_pred HHHHHHHHHcCCCchh-hHHHHHHHHHHHHHHcCCccc-------cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHH
Confidence 3444444444554433 344778899999998776531 12334567778888755 67799999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHH
Q psy4385 346 ELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAA 388 (473)
Q Consensus 346 ~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~ 388 (473)
.+....++.|...|+--.+.|+...|...+.+|+.+.|...+.
T Consensus 88 ~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 88 ANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 9988889999999999999999999999999999999987664
No 299
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.49 E-value=0.012 Score=48.16 Aligned_cols=43 Identities=23% Similarity=0.182 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHH
Q psy4385 316 TLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRR 358 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~ 358 (473)
..-.+++.+|..++++|+|..|..+++.+|+++|+|..|.--+
T Consensus 75 ~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 75 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 3567899999999999999999999999999999998886443
No 300
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.36 E-value=0.015 Score=55.88 Aligned_cols=104 Identities=8% Similarity=0.019 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCh-----------hHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy4385 309 QETERKKTLTACHLNAAMCLLKLKQA-----------KPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQK 377 (473)
Q Consensus 309 ~~~~~~~~~~~~~~nla~~~~kl~~~-----------~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~ 377 (473)
...+++|.++.+|-.++.||..+..+ ..|+. ...++..+|.++.+|..++.++...|++++|+..+++
T Consensus 224 ~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~-a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~r 302 (372)
T 3ly7_A 224 EIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEID-NIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINT 302 (372)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHH-HHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 34577888899999999998643221 11222 1134577899999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4385 378 VLQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFD 415 (473)
Q Consensus 378 al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 415 (473)
|+.++|+ ..++..++.+....++..++. ..|.+.|.
T Consensus 303 Al~Ln~s-~~a~~llG~~~~~~G~~~eA~-e~~~~Alr 338 (372)
T 3ly7_A 303 GIDLEMS-WLNYVLLGKVYEMKGMNREAA-DAYLTAFN 338 (372)
T ss_dssp HHHHCCC-HHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred HHhcCCC-HHHHHHHHHHHHHCCCHHHHH-HHHHHHHh
Confidence 9999975 667778888887666555443 45555554
No 301
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.054 Score=57.28 Aligned_cols=64 Identities=13% Similarity=0.073 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy4385 315 KTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKV 378 (473)
Q Consensus 315 ~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~a 378 (473)
+....++.-.|..++..++|+.|+..+.+|+..-|.....|++++.||..+|+|+.|+-.+.-+
T Consensus 334 ~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 334 NCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred CcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3444566667787888999999999999999999999999999999999999999999766554
No 302
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.28 E-value=0.049 Score=45.77 Aligned_cols=85 Identities=13% Similarity=0.092 Sum_probs=62.9
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHhhhCCCCH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcC---CCC---
Q psy4385 321 HLNAAMCLLKLKQAKPAKDQCDKAIELEPNNE---------KAFFRRGNAYLDLNEPELAEKDFQKVLQID---PNN--- 385 (473)
Q Consensus 321 ~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~---------ka~~~~g~a~~~lg~~~~A~~~~~~al~l~---P~~--- 385 (473)
++.-...++..+.|+.|+-.++.++.+..++. .+++.+|.+++..++|..|...|++||++. |.+
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 33444556788999999999999887754333 488999999999999999999999997653 112
Q ss_pred -------------------HHHHHHHHHHHHHHHHHHHH
Q psy4385 386 -------------------KAAVQKLTQTKQKLREQKIK 405 (473)
Q Consensus 386 -------------------~~~~~~l~~~~~~~~~~~~~ 405 (473)
.++++.++.|..++++.+++
T Consensus 103 ~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 103 RPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 15667777887777555543
No 303
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.08 E-value=0.16 Score=42.63 Aligned_cols=94 Identities=14% Similarity=0.130 Sum_probs=71.6
Q ss_pred hcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh--h-----
Q psy4385 275 RGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE--L----- 347 (473)
Q Consensus 275 ~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~--~----- 347 (473)
.+..+|-.|.|.+|+-.....- .....+-.+.||.++++|..|+...+..|+ .
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~lN--------------------T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~ 98 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHKLN--------------------TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPD 98 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHTCC--------------------BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCC
T ss_pred hhhhhhhcchHhHHHHHHHhcc--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc
Confidence 4667788888888776654321 255667789999999999999999999992 2
Q ss_pred ----------CCCCHHHH-HHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHH
Q psy4385 348 ----------EPNNEKAF-FRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAA 388 (473)
Q Consensus 348 ----------~p~~~ka~-~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~ 388 (473)
||.+-..+ .-+|..+.++|+-++|+..+.+....+|--+.+
T Consensus 99 ~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 99 VDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp CCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred cccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 23343443 357899999999999999999999988865544
No 304
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.84 E-value=0.17 Score=50.90 Aligned_cols=83 Identities=13% Similarity=0.072 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTK 396 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 396 (473)
...++.++|....-...+..|..+|.+|+.+.|.+..+|..+|......|++-+|+-+|.+++....-.+.+..+|..+.
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 34577888988888889999999999999999999999999999999999999999999999998777888888888776
Q ss_pred HHH
Q psy4385 397 QKL 399 (473)
Q Consensus 397 ~~~ 399 (473)
.+.
T Consensus 231 ~~~ 233 (497)
T 1ya0_A 231 SKA 233 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 305
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.43 E-value=0.35 Score=48.76 Aligned_cols=124 Identities=11% Similarity=-0.025 Sum_probs=85.7
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCC-------h-hHH-HH----------------HHHHHHHHHHH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFE-------G-EQE-TE----------------RKKTLTACHLN 323 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~-------~-~~~-~~----------------~~~~~~~~~~n 323 (473)
...+...+.-+...|+.+.|...|.+|+.. +...... + ++. .. .......+|..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 445666666677889999999999999988 5432110 0 000 00 01223466777
Q ss_pred HHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy4385 324 AAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLN-EPELAEKDFQKVLQIDPNNKAAVQKLTQ 394 (473)
Q Consensus 324 la~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg-~~~~A~~~~~~al~l~P~~~~~~~~l~~ 394 (473)
.+....+.++.+.|...+.+| ...+.....|...+..-...+ +++.|...|+++++..|+++..+.....
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid 362 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFL 362 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 777777888999999999999 443345566666676666666 6999999999999999998876444433
No 306
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.42 E-value=0.31 Score=49.24 Aligned_cols=116 Identities=11% Similarity=-0.013 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHH---
Q psy4385 285 FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNA--- 361 (473)
Q Consensus 285 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a--- 361 (473)
...+...|++++.. .|....+|++.+..+...++.+.|...+++|+.. |.+...++..+..
T Consensus 195 ~~Rv~~~ye~al~~---------------~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~ 258 (493)
T 2uy1_A 195 ESRMHFIHNYILDS---------------FYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDE 258 (493)
T ss_dssp HHHHHHHHHHHHHH---------------TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHc---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcch
Confidence 34456677777743 3445789999999999999999999999999999 9876444333322
Q ss_pred -------------------------------------HHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4385 362 -------------------------------------YLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKI 404 (473)
Q Consensus 362 -------------------------------------~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 404 (473)
..+.++.+.|...|.+| ...+....++...+.+........+
T Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~ 337 (493)
T 2uy1_A 259 EAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRA 337 (493)
T ss_dssp THHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSH
T ss_pred hHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChH
Confidence 22356788899999999 4332233444333443333322234
Q ss_pred HHHHHHHHHhhhh
Q psy4385 405 KEKQVYANMFDKF 417 (473)
Q Consensus 405 ~~k~~~~~~f~~~ 417 (473)
..+..|.......
T Consensus 338 ~ar~ife~al~~~ 350 (493)
T 2uy1_A 338 TPYNIFSSGLLKH 350 (493)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHC
Confidence 4555666555544
No 307
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.15 E-value=0.27 Score=44.73 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=60.8
Q ss_pred HHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy4385 327 CLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQ 394 (473)
Q Consensus 327 ~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~ 394 (473)
.+++.++.+.|+..+...++-+|.|++....+-+.+.-.|+|+.|..-++.+.+++|+.......+..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~ 73 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRH 73 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999998665444433
No 308
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.89 E-value=0.45 Score=46.25 Aligned_cols=98 Identities=14% Similarity=0.020 Sum_probs=79.5
Q ss_pred hhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC---CC
Q psy4385 274 ERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE---PN 350 (473)
Q Consensus 274 ~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~---p~ 350 (473)
.+|..|+..|+|.+|...+.+.++.+..... ......++......|..++++.++...+.+|.... +.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 6889999999999999999999987765321 35677889999999999999999999999987553 12
Q ss_pred CH----HHHHHHHHHHH-hcCCHHHHHHHHHHHHh
Q psy4385 351 NE----KAFFRRGNAYL-DLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 351 ~~----ka~~~~g~a~~-~lg~~~~A~~~~~~al~ 380 (473)
.+ .....-|..++ ..++|..|..+|-.++.
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 22 33445689999 89999999999999874
No 309
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=92.59 E-value=0.16 Score=50.23 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEEEeeeCCeEEEec---eeeEEeCCCcccCCcHHHHHHHHhcccCcEEEEEecCCCCCCCCCCCCCCCCC
Q psy4385 162 TPKDGANVEITLKGECEGKVFQEG---TFSFVLGEGSEYDIPENLEKALEKFKYKEKSRLFVQPQHLWSGKGNDKLGVPS 238 (473)
Q Consensus 162 ~p~~~~~v~~~~~g~~~g~~~~~~---~~~~~lg~~~~~~~~~gle~al~~m~~gE~~~~~i~~~~~~~~~g~~~~~ip~ 238 (473)
....|+.|+++|.|..+|..|++. ++.+.+|.+. + ++.+|.+|+.|+...|.+. | +
T Consensus 154 ~a~~gD~V~id~~~~~dG~~~~~~~~~~~~l~~g~~~----~--fe~~liG~k~Ge~~~~~vt----F-----------a 212 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYNEEGKKLTSREYEYVISEDEDR----P--FVKDLVGKKKGDVVEIERE----Y-----------E 212 (433)
T ss_dssp CCCTTSEEEEEEEEECTTSCEEEEEEEEEECCSSCCC----T--THHHHTTCCTTCEEEEEEE----E-----------T
T ss_pred ccCCCCEEEEEEEEEECCEECcCCCCCCeEEEecCCc----h--HHHHhCCCCCCceEEEEEe----e-----------C
Confidence 356899999999999999999864 5566677764 2 8899999999999998872 2 2
Q ss_pred CCCceeeeeeccccc
Q psy4385 239 NKPATYTITMNNFEK 253 (473)
Q Consensus 239 ~~~~~y~i~L~~~~~ 253 (473)
+....|.+.+..+..
T Consensus 213 Gk~a~F~VtV~~Ik~ 227 (433)
T 3gty_X 213 GKKYTYKLEVEEVYK 227 (433)
T ss_dssp TEEEEEEEEEEEEEE
T ss_pred CCeEEEEEEEEEEEE
Confidence 456889998887754
No 310
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=91.85 E-value=0.8 Score=42.72 Aligned_cols=118 Identities=15% Similarity=0.071 Sum_probs=72.6
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC--Ch--hHHHHHHHHH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK--QA--KPAKDQCDKA 344 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~--~~--~~A~~~~~~a 344 (473)
.....+.|..++..|+|.+|+..|+.+|..+......+.++..+++.....+...+-.+-+.+. .. +...+.++-|
T Consensus 114 L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELA 193 (325)
T 3mv2_A 114 VNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELA 193 (325)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 3344558999999999999999999999887765555556655666555554333222222221 10 1112222222
Q ss_pred h-----hhCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 345 I-----ELEPNNEKAFFRRG-NAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 345 l-----~~~p~~~ka~~~~g-~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
. .+.|.+--.-.|.| ...++.++|.-|....++.|++.|...
T Consensus 194 AYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 241 (325)
T 3mv2_A 194 AYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGP 241 (325)
T ss_dssp HHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 1 23333332233444 445788999999999999999999744
No 311
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=91.60 E-value=6 Score=36.83 Aligned_cols=114 Identities=17% Similarity=0.211 Sum_probs=73.9
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHc--CCh-----hHHHHHHHH
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKL--KQA-----KPAKDQCDK 343 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl--~~~-----~~A~~~~~~ 343 (473)
...+.|..++..|+|.+|+..|+.+|..+......+.++..+++.....+...+-.+-+.+ .+. +...+.++-
T Consensus 104 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lEL 183 (320)
T 3mkr_B 104 QRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEM 183 (320)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHH
Confidence 3456799999999999999999999988876655566666666665555443333222233 221 232333333
Q ss_pred Hh-----hhCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhcCCC
Q psy4385 344 AI-----ELEPNNEKAFFRRG-NAYLDLNEPELAEKDFQKVLQIDPN 384 (473)
Q Consensus 344 al-----~~~p~~~ka~~~~g-~a~~~lg~~~~A~~~~~~al~l~P~ 384 (473)
+. .+.|.+--.-.|.| ...++.++|.-|....++.|++.|.
T Consensus 184 AAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 184 AAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 32 23343333333444 4457889999999999999999886
No 312
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.75 E-value=0.35 Score=47.80 Aligned_cols=101 Identities=12% Similarity=-0.026 Sum_probs=78.3
Q ss_pred HHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh--
Q psy4385 270 KLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL-- 347 (473)
Q Consensus 270 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~-- 347 (473)
..+..+|.-++..|++..|...|.++....... .....++++...+++..++|..|...++++..+
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~------------~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~ 199 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAIST------------GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE 199 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC------------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh------------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Confidence 356678999999999999999999988655432 134678888888999999999999999998655
Q ss_pred -CCCC-H--HHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q psy4385 348 -EPNN-E--KAFFRRGNAYLDLNEPELAEKDFQKVLQID 382 (473)
Q Consensus 348 -~p~~-~--ka~~~~g~a~~~lg~~~~A~~~~~~al~l~ 382 (473)
.++. . +.....|.++...++|.+|...|..++.-.
T Consensus 200 ~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 200 KGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp TCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 2222 1 334456788889999999999998876543
No 313
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=90.14 E-value=1.3 Score=40.31 Aligned_cols=62 Identities=15% Similarity=0.050 Sum_probs=55.1
Q ss_pred hhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHH
Q psy4385 278 TYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKA 354 (473)
Q Consensus 278 ~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka 354 (473)
.+++.++...|+......| ..+|.++.+...+-..+.-.|+|++|...++.+.+++|.....
T Consensus 6 ~ll~~g~L~~al~~~~~~V---------------R~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAI---------------KASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHH---------------HTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHhCCCHHHHHHHHHHHH---------------HhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 4678999999999999999 5566778888888999999999999999999999999987654
No 314
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=88.69 E-value=7.3 Score=37.64 Aligned_cols=85 Identities=9% Similarity=-0.022 Sum_probs=64.9
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHhhhCC----------CCH------------HHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy4385 321 HLNAAMCLLKLKQAKPAKDQCDKAIELEP----------NNE------------KAFFRRGNAYLDLNEPELAEKDFQKV 378 (473)
Q Consensus 321 ~~nla~~~~kl~~~~~A~~~~~~al~~~p----------~~~------------ka~~~~g~a~~~lg~~~~A~~~~~~a 378 (473)
+...|......++...|+..+.+|+.+-. .+. .++..++.+++.+|++++|+..+.++
T Consensus 118 l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~ 197 (388)
T 2ff4_A 118 EKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEAL 197 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 33444445567899999999999987731 111 35556788899999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHH
Q psy4385 379 LQIDPNNKAAVQKLTQTKQKLREQKIK 405 (473)
Q Consensus 379 l~l~P~~~~~~~~l~~~~~~~~~~~~~ 405 (473)
+..+|-+..++..|..++...+++.++
T Consensus 198 ~~~~P~~E~~~~~lm~al~~~Gr~~~A 224 (388)
T 2ff4_A 198 TFEHPYREPLWTQLITAYYLSDRQSDA 224 (388)
T ss_dssp HHHSTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 999999999998888877665555443
No 315
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=88.01 E-value=0.57 Score=49.54 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=49.7
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
.+...+..+..+|+|+.|+..-++|+.+.+ ..-..|..||.||.++|+|+.|+-..+-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aP---------------seF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELAL---------------DSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCS---------------SCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCc---------------hhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 344556667789999999999999995554 45789999999999999999999887766
No 316
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=87.16 E-value=3.8 Score=39.75 Aligned_cols=127 Identities=9% Similarity=-0.002 Sum_probs=85.9
Q ss_pred hHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCC------------------CCChh----------HHHHHH-H--HH
Q psy4385 269 GKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDG------------------GFEGE----------QETERK-K--TL 317 (473)
Q Consensus 269 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~------------------~~~~~----------~~~~~~-~--~~ 317 (473)
-.+..++|..|.+.|++++-.........++.... +.+.+ +|..-. . +.
T Consensus 19 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr 98 (394)
T 3txn_A 19 EQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLR 98 (394)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677899999999999988888776665554311 11111 111111 1 12
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhh----CC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC---CCCHHH
Q psy4385 318 TACHLNAAMCLLKLKQAKPAKDQCDKAIEL----EP--NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQID---PNNKAA 388 (473)
Q Consensus 318 ~~~~~nla~~~~kl~~~~~A~~~~~~al~~----~p--~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~---P~~~~~ 388 (473)
..+-.++|..|+..|+|.+|...+.++++- |. .-...+....++|..++++..+.+.|.+|.... +.++.+
T Consensus 99 ~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i 178 (394)
T 3txn_A 99 QSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKV 178 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHH
Confidence 234458999999999999999999888764 21 123567778899999999999999999997653 234555
Q ss_pred HHHHHHH
Q psy4385 389 VQKLTQT 395 (473)
Q Consensus 389 ~~~l~~~ 395 (473)
...+..+
T Consensus 179 ~a~i~~~ 185 (394)
T 3txn_A 179 QGALDLQ 185 (394)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 317
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.11 E-value=5.4 Score=39.42 Aligned_cols=105 Identities=11% Similarity=-0.029 Sum_probs=77.9
Q ss_pred hhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh-
Q psy4385 268 QGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE- 346 (473)
Q Consensus 268 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~- 346 (473)
.+.....++..++..|+|.+|.........-.... . -......+++.....|+..++|.+|...++++..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~--~-------~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGS--M-------EMSEKIQFILEQMELSILKGDYSQATVLSRKILKK 206 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS--S-------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--c-------cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 45556678899999999999999988875322110 0 1234577788888899999999999999998742
Q ss_pred --hCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy4385 347 --LEPNNE----KAFFRRGNAYLDLNEPELAEKDFQKVLQI 381 (473)
Q Consensus 347 --~~p~~~----ka~~~~g~a~~~lg~~~~A~~~~~~al~l 381 (473)
-.+..+ ..+...|..+...++|.+|..+|..++..
T Consensus 207 ~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 207 TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 223332 34556788889999999999999988764
No 318
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.88 E-value=1.6 Score=43.66 Aligned_cols=69 Identities=13% Similarity=0.016 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC--CC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCH
Q psy4385 318 TACHLNAAMCLLKLKQAKPAKDQCDKAIELEP--NN---EKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 318 ~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p--~~---~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~ 386 (473)
+.+++-+=..|+..+.|++|....+++.-... .| +..+|..|.++.-.++|.+|..+|..|++..|.+.
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 55667777889999999999999999953221 22 45677889999999999999999999999988653
No 319
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=86.30 E-value=1.5 Score=44.13 Aligned_cols=80 Identities=11% Similarity=-0.090 Sum_probs=68.5
Q ss_pred HHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC
Q psy4385 270 KLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP 349 (473)
Q Consensus 270 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p 349 (473)
..+..+|.....+..+..|..+|.+|+ .+.|.....|+.+|.++.-.+++-.|+-+|.++|....
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~---------------~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~ 217 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAA---------------QLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKF 217 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH---------------HHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSB
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHH---------------HhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCC
Confidence 456678999888899999999999999 66666788999999999999999999999999998877
Q ss_pred CCHHHHHHHHHHHHh
Q psy4385 350 NNEKAFFRRGNAYLD 364 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~ 364 (473)
-.+.|.-++...+..
T Consensus 218 Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 218 PFPAASTNLQKALSK 232 (497)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHH
Confidence 778887777766653
No 320
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=85.22 E-value=0.85 Score=33.50 Aligned_cols=35 Identities=29% Similarity=0.165 Sum_probs=30.6
Q ss_pred HHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhh
Q psy4385 265 KLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYL 299 (473)
Q Consensus 265 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~ 299 (473)
.+..|..+...|...-+.|+|.+|+.+|..||.++
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 41 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVL 41 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 45678888889999999999999999999999654
No 321
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=84.55 E-value=19 Score=36.06 Aligned_cols=118 Identities=8% Similarity=0.015 Sum_probs=81.1
Q ss_pred hhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC-CCCHHHHHHH
Q psy4385 280 FKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE-PNNEKAFFRR 358 (473)
Q Consensus 280 ~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~-p~~~ka~~~~ 358 (473)
.+.+....|...|.+....- +. .+...|+.+-.+|.+.|++++|...+++..+.. .-+...|..+
T Consensus 81 ~~~~~l~~A~~lf~~M~~~G-------------~~-Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~l 146 (501)
T 4g26_A 81 SPNPGLSRGFDIFKQMIVDK-------------VV-PNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPA 146 (501)
T ss_dssp SCCHHHHHHHHHHHHHHHTT-------------CC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred hhcchHHHHHHHHHHHHHhC-------------CC-CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHH
Confidence 34566788888887765220 00 135578888889999999999999999987653 2367788888
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 359 GNAYLDLNEPELAEKDFQKVLQI--DPNNKAAVQKLTQTKQKLREQKIKEKQVYANM 413 (473)
Q Consensus 359 g~a~~~lg~~~~A~~~~~~al~l--~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 413 (473)
-.+|.+.|++++|.+.|....+. .|+ ...+..|-.+..+.++.++ ..+.+.+|
T Consensus 147 I~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~~ty~~Li~~~~~~g~~d~-A~~ll~~M 201 (501)
T 4g26_A 147 LFGFCRKGDADKAYEVDAHMVESEVVPE-EPELAALLKVSMDTKNADK-VYKTLQRL 201 (501)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTTCHHH-HHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHhhCCCHHH-HHHHHHHH
Confidence 89999999999999999988764 454 4455555555444443332 23344444
No 322
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=83.83 E-value=10 Score=37.98 Aligned_cols=100 Identities=13% Similarity=0.040 Sum_probs=77.3
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC-
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP- 349 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p- 349 (473)
.+..+-..+.+.|++++|...|.+....-- . .+...|+.+=.+|.+.|++++|...+++..+..-
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~-------------~-Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~ 172 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAFGI-------------Q-PRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVV 172 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHTTC-------------C-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-------------C-CccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 344556678899999999999988763210 0 1255677777888999999999999999887642
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh--cCCC
Q psy4385 350 NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQ--IDPN 384 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~--l~P~ 384 (473)
-+...|..+-.+|.+.|++++|.+.|++..+ ..|+
T Consensus 173 Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 173 PEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred CCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 2667888899999999999999999998755 3555
No 323
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.00 E-value=5.1 Score=44.81 Aligned_cols=105 Identities=12% Similarity=-0.019 Sum_probs=75.3
Q ss_pred HhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCCh--hHHHHHH------HHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 273 KERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEG--EQETERK------KTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 273 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~--~~~~~~~------~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
+-+|..++..|++++|..+|.+|...+........ .....+. ......|+.....+-+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 56889999999999999999998754433221111 1111111 113456778888888999999999999999
Q ss_pred hhhCCCCH-----HHHHHHHHHHHhcCCHHHHHHHHHH
Q psy4385 345 IELEPNNE-----KAFFRRGNAYLDLNEPELAEKDFQK 377 (473)
Q Consensus 345 l~~~p~~~-----ka~~~~g~a~~~lg~~~~A~~~~~~ 377 (473)
|+..+.+. ..|.+.-.+++.+++|++|...+..
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 98764332 2577888999999999999877743
No 324
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=82.23 E-value=4.6 Score=34.20 Aligned_cols=84 Identities=12% Similarity=-0.026 Sum_probs=48.7
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
+....|+.+|......|++.-|..+|.++-++ ..+...|.-.|+-+.-....+.+..
T Consensus 32 ~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-----------------------~~L~~Ly~~tg~~e~L~kla~iA~~ 88 (177)
T 3mkq_B 32 NDSITWERLIQEALAQGNASLAEMIYQTQHSF-----------------------DKLSFLYLVTGDVNKLSKMQNIAQT 88 (177)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH-----------------------HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH-----------------------HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34456777888888888888888888776522 1233334445555443333333332
Q ss_pred hCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy4385 347 LEPNNEKAFFRRGNAYLDLNEPELAEKDFQKV 378 (473)
Q Consensus 347 ~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~a 378 (473)
.+ + +.....+++.+|+++++++.|.+.
T Consensus 89 ~g-~----~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 89 RE-D----FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp TT-C----HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred Cc-c----HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 22 1 122345677788888888777654
No 325
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=80.62 E-value=3.8 Score=32.18 Aligned_cols=41 Identities=22% Similarity=0.314 Sum_probs=33.7
Q ss_pred cCch-hHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhc
Q psy4385 260 LNSD-EKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLD 300 (473)
Q Consensus 260 ~~~~-~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~ 300 (473)
|+.. ..+..|..+...+...-..++|.+|+.+|..|+.++-
T Consensus 8 m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 8 MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 4444 5667788888889899999999999999999997653
No 326
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=79.93 E-value=7.6 Score=38.37 Aligned_cols=105 Identities=8% Similarity=0.004 Sum_probs=70.5
Q ss_pred hcccHHHHHHHHHHHhhhhcCCCCCChhHH-HHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC--------C--
Q psy4385 281 KQDKFELACRNYKKAIPYLDFDGGFEGEQE-TERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE--------P-- 349 (473)
Q Consensus 281 ~~~~~~~A~~~y~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~--------p-- 349 (473)
+....+.|.+...++...+-.+...+.++. ..-+....-+.+++-.+|+++++...|...+...-... |
T Consensus 138 ~~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~ 217 (455)
T 3t5v_B 138 SHQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLD 217 (455)
T ss_dssp TTHHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHH
T ss_pred chhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCcc
Confidence 345667788888888877655443221110 01223334455667788999999999888775432222 1
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-CCCC
Q psy4385 350 NNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI-DPNN 385 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l-~P~~ 385 (473)
+-+..+|.+|..++..++|.+|..+|..|++. .|.+
T Consensus 218 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 218 QQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 12357889999999999999999999999999 7765
No 327
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=79.18 E-value=4.6 Score=34.22 Aligned_cols=52 Identities=23% Similarity=0.214 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVL 379 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al 379 (473)
..+.+| +.+|+++.|.+.+... ++...|.++|.+.+..|+++-|..+|.++-
T Consensus 10 ~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 10 IRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 344554 5789999999988765 578899999999999999999999998874
No 328
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=78.34 E-value=4.6 Score=42.73 Aligned_cols=57 Identities=16% Similarity=0.001 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhh--------CCCCHHHHHHHHHHHHhcCCHHHHHHH
Q psy4385 318 TACHLNAAMCLLKLKQAKPAKDQCDKAIEL--------EPNNEKAFFRRGNAYLDLNEPELAEKD 374 (473)
Q Consensus 318 ~~~~~nla~~~~kl~~~~~A~~~~~~al~~--------~p~~~ka~~~~g~a~~~lg~~~~A~~~ 374 (473)
...|.++|..+++.++++.|+.+|.++-.. ...+.+.+-.++......|++..|...
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~ 745 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNA 745 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHH
Confidence 457788888888888888888888775221 234445444554444444444444433
No 329
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=78.01 E-value=1.7 Score=31.86 Aligned_cols=37 Identities=30% Similarity=0.157 Sum_probs=32.3
Q ss_pred hhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhh
Q psy4385 263 DEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYL 299 (473)
Q Consensus 263 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~ 299 (473)
...+..|..+...|..+-+.|+|.+|+.+|..|+.++
T Consensus 13 ~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 49 (83)
T 2w2u_A 13 VMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVL 49 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4556778888999999999999999999999999654
No 330
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=77.09 E-value=2.1 Score=31.42 Aligned_cols=39 Identities=21% Similarity=0.349 Sum_probs=31.9
Q ss_pred CchhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhh
Q psy4385 261 NSDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYL 299 (473)
Q Consensus 261 ~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~ 299 (473)
+....+..|..+...+...-..|+|.+|+.+|..|+.++
T Consensus 5 ~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l 43 (85)
T 2v6x_A 5 STGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYL 43 (85)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 334456677788888888899999999999999999654
No 331
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=76.70 E-value=3.8 Score=43.38 Aligned_cols=81 Identities=14% Similarity=0.042 Sum_probs=44.8
Q ss_pred HHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCC
Q psy4385 270 KLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEP 349 (473)
Q Consensus 270 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p 349 (473)
..++.+|..+.+.++++.|+.+|.++-++ -.+..++...++.+........+... .
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~-----------------------~~l~~l~~~~~~~~~~~~~~~~a~~~-~ 737 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDL-----------------------ESLFLLHSSFNNKEGLVTLAKDAETT-G 737 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCH-----------------------HHHHHHHHHTTCHHHHHHHHHHHHHT-T
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccCh-----------------------hhhHHHHHHcCCHHHHHHHHHHHHHc-C
Confidence 45677788888888888888888876522 12233333455555444433333332 1
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy4385 350 NNEKAFFRRGNAYLDLNEPELAEKDFQKV 378 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~lg~~~~A~~~~~~a 378 (473)
... ....+++.+|++++|++.|.+.
T Consensus 738 ~~~----~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 738 KFN----LAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp CHH----HHHHHHHHHTCHHHHHHHHHHT
T ss_pred chH----HHHHHHHHcCCHHHHHHHHHHc
Confidence 111 1223456677777777776554
No 332
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=75.48 E-value=7.6 Score=31.94 Aligned_cols=103 Identities=17% Similarity=0.065 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCh------hHHHHHHHHHhhhCCCC--------HHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy4385 313 RKKTLTACHLNAAMCLLKLKQA------KPAKDQCDKAIELEPNN--------EKAFFRRGNAYLDLNEPELAEKDFQKV 378 (473)
Q Consensus 313 ~~~~~~~~~~nla~~~~kl~~~------~~A~~~~~~al~~~p~~--------~ka~~~~g~a~~~lg~~~~A~~~~~~a 378 (473)
+.|.+...|.+.....-+.|+. ++.++.|++|+..-|-. +..|.+.|.- ..+++.++|...|+.|
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 3455677777777777777988 88999999999776542 3445556643 6779999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy4385 379 LQIDPNNKAAVQKLTQTKQKLREQKIKEKQVYANMFDKF 417 (473)
Q Consensus 379 l~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~ 417 (473)
+.++...+.++...+.-.-+.+ .-.+.++...+.....
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqg-nl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQG-NVKKSKQLLQKAVERG 124 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHhccC
Confidence 9986666444444444333321 2234455555555533
No 333
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.96 E-value=9.2 Score=29.69 Aligned_cols=71 Identities=14% Similarity=0.069 Sum_probs=52.3
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcC-------CCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhH
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDF-------DGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKP 336 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~-------~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~ 336 (473)
-..|-.+.+.|...-..|+-+.|+.+|+++|..+.. ......+.|.....+...-..||.++.-+++....
T Consensus 19 h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~ 96 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEK 96 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344556666777777778888999999888877654 22355678888888888888999988877765544
No 334
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=72.78 E-value=6.2 Score=29.46 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=31.2
Q ss_pred hHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhc
Q psy4385 264 EKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLD 300 (473)
Q Consensus 264 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~ 300 (473)
..+..|..+...|..+-+.|+|.+|+.+|..|+.++-
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3455677888889999999999999999999997654
No 335
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.65 E-value=7.3 Score=30.26 Aligned_cols=70 Identities=14% Similarity=0.074 Sum_probs=44.4
Q ss_pred ChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC----HHHHHHHHHHHHHHHHHHHHHHH
Q psy4385 333 QAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNN----KAAVQKLTQTKQKLREQKIKEKQ 408 (473)
Q Consensus 333 ~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~----~~~~~~l~~~~~~~~~~~~~~k~ 408 (473)
.|++|..+.++||.+|.. |.-...+..|..++..|.+++.+..+- ...|.....+..+++......+.
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~ 89 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRT 89 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 367888888888888752 333334445666677888888887642 34566666666666555555444
Q ss_pred HH
Q psy4385 409 VY 410 (473)
Q Consensus 409 ~~ 410 (473)
+.
T Consensus 90 RL 91 (116)
T 2dl1_A 90 RL 91 (116)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 336
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=70.54 E-value=12 Score=26.49 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=28.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q psy4385 357 RRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLT 393 (473)
Q Consensus 357 ~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 393 (473)
.+|..+...|++++|...|-+|+.+.|+-.+....+.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888888888888888888887666554443
No 337
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=70.08 E-value=4.1 Score=30.07 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=29.6
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhc
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLD 300 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~ 300 (473)
+..|..+--++..+.+.|+|++||.++.+|..++.
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 45677788889999999999999999999995543
No 338
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=67.79 E-value=34 Score=25.24 Aligned_cols=23 Identities=26% Similarity=0.134 Sum_probs=11.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHH
Q psy4385 355 FFRRGNAYLDLNEPELAEKDFQK 377 (473)
Q Consensus 355 ~~~~g~a~~~lg~~~~A~~~~~~ 377 (473)
+-|++..+...|+|++|+.+.++
T Consensus 18 ~~RrAe~ll~~gkydeAIech~k 40 (97)
T 2crb_A 18 QSRRADRLLAAGKYEEAISCHRK 40 (97)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhhHHHHHHhcCCHHHHHHHHHH
Confidence 33555555555555555444333
No 339
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=67.16 E-value=25 Score=36.27 Aligned_cols=54 Identities=7% Similarity=0.056 Sum_probs=46.0
Q ss_pred HHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 327 CLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 327 ~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
..++.+++..|..++.+.-.-......+.|.+|.++..+|+-++|...|.++..
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 345779999999999876664446788999999999999999999999998875
No 340
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=66.63 E-value=9.4 Score=28.02 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=27.9
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhc
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYLD 300 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~ 300 (473)
..+..+...+..+-..|+|.+|+.+|..|+.++-
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3456677778888899999999999999997653
No 341
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=66.57 E-value=11 Score=37.01 Aligned_cols=62 Identities=8% Similarity=0.093 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhC---CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELE---PNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI 381 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~---p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l 381 (473)
++..+|..|++.|+++.|++.+.++.... .+....++..-.++...++|..|...+.++..+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 66789999999999999999999988663 234578888889999999999999999999765
No 342
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=66.39 E-value=32 Score=27.81 Aligned_cols=91 Identities=11% Similarity=0.062 Sum_probs=61.1
Q ss_pred HHHhhcchh--hhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHH-HcCChhHHHHHHHHHhhh
Q psy4385 271 LLKERGTTY--FKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLL-KLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 271 ~~~~~G~~~--~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-kl~~~~~A~~~~~~al~~ 347 (473)
.+-..|..+ -.-++...-+.+|-+.-.. .-|.++|.-++ ..|.-++--+.+...+..
T Consensus 61 vLd~IGkiFDis~C~NlKrVi~C~~~~n~~--------------------se~vd~ALd~lv~~~KkDqLdki~~~~l~n 120 (172)
T 1wy6_A 61 VLDKIGSYFDLDKCQNLKSVVECGVINNTL--------------------NEHVNKALDILVIQGKRDKLEEIGREILKN 120 (172)
T ss_dssp HHHHHGGGSCGGGCSCTHHHHHHHHHTTCC--------------------CHHHHHHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred HHHHHhhhcCcHhhhcHHHHHHHHHHhcch--------------------HHHHHHHHHHHHHhccHhHHHHHHHHHhcc
Confidence 344455544 3556677777777655422 12456665544 455555555555665666
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q psy4385 348 EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI 381 (473)
Q Consensus 348 ~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l 381 (473)
++-++..++.+|.||.++|+..+|.+.+.+|.+-
T Consensus 121 ~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 121 NEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 7778999999999999999999999999998764
No 343
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=63.46 E-value=73 Score=31.11 Aligned_cols=63 Identities=8% Similarity=-0.138 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHcCChhHHHHHHHHHhhh----CCC--CHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy4385 317 LTACHLNAAMCLLKLKQAKPAKDQCDKAIEL----EPN--NEKAFFRRGNAYLDLNEPELAEKDFQKVL 379 (473)
Q Consensus 317 ~~~~~~nla~~~~kl~~~~~A~~~~~~al~~----~p~--~~ka~~~~g~a~~~lg~~~~A~~~~~~al 379 (473)
.+.+...+|..|...|+|.+|......+..- ++. -...+..-...|+..++|..|...+.++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4667788999999999999999999887532 222 23566777889999999999999999874
No 344
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=61.14 E-value=73 Score=26.75 Aligned_cols=55 Identities=13% Similarity=0.066 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVL 379 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al 379 (473)
...-++..++-.|+|..|+-+. ..-+.+-+.|..+.||..+.+|..|+..+...+
T Consensus 35 Y~lL~~I~LyyngEY~R~Lf~L-----~~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 35 YRMLMSIVLYLNGEYTRALFHL-----HKLNTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp THHHHHHHHHHTTCHHHHHHHH-----HTCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhcchHhHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677788889999887754 234567889999999999999999999999999
No 345
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=57.70 E-value=43 Score=26.04 Aligned_cols=22 Identities=23% Similarity=0.283 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhcCCCCHHHHH
Q psy4385 369 ELAEKDFQKVLQIDPNNKAAVQ 390 (473)
Q Consensus 369 ~~A~~~~~~al~l~P~~~~~~~ 390 (473)
.+|+..|..+++..+.+.....
T Consensus 42 ~~Aie~l~~alk~e~~~~~~k~ 63 (117)
T 2cpt_A 42 QHAVQYFLHVVKYEAQGDKAKQ 63 (117)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHH
Confidence 3455556666666766665443
No 346
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=56.48 E-value=1.2e+02 Score=33.39 Aligned_cols=100 Identities=9% Similarity=-0.106 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHHHhhh----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--CCCCHHHHHH
Q psy4385 318 TACHLNAAMCLLKLKQAKPAKDQCDKAIEL----EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI--DPNNKAAVQK 391 (473)
Q Consensus 318 ~~~~~nla~~~~kl~~~~~A~~~~~~al~~----~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l--~P~~~~~~~~ 391 (473)
...|+-+=.+|.+.|+.++|...+...-+. -.-|+..|.-+-..|.+.|++++|...|.+..+. .|+ ...+..
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD-vvTYnt 205 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD-LLSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc-HHHHHH
Confidence 445677778899999999999999764332 2346788999999999999999999999988764 465 445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy4385 392 LTQTKQKLREQKIKEKQVYANMFDKFA 418 (473)
Q Consensus 392 l~~~~~~~~~~~~~~k~~~~~~f~~~~ 418 (473)
|-.+..+.+...+...+.+..|-++--
T Consensus 206 LI~glcK~G~~~e~A~~Ll~EM~~kG~ 232 (1134)
T 3spa_A 206 ALQCMGRQDQDAGTIERCLEQMSQEGL 232 (1134)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 555554443323344457777766543
No 347
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=56.38 E-value=73 Score=30.09 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHcCC--hhHHHHHHHHHhhh-----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCC
Q psy4385 319 ACHLNAAMCLLKLKQ--AKPAKDQCDKAIEL-----EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI------DPNN 385 (473)
Q Consensus 319 ~~~~nla~~~~kl~~--~~~A~~~~~~al~~-----~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l------~P~~ 385 (473)
.++.|||.+--..-- ...++..|.+|+.. +..++..|-.+|-.|++.+++.+|++.+-.|-.. ..++
T Consensus 256 mALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reD 335 (472)
T 3re2_A 256 MAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDD 335 (472)
T ss_dssp HHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGG
T ss_pred hhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccH
Confidence 344455554332221 22267777777644 4456777888888999999999999999877554 2345
Q ss_pred HHHHHHHHHHH
Q psy4385 386 KAAVQKLTQTK 396 (473)
Q Consensus 386 ~~~~~~l~~~~ 396 (473)
.++++++-.+.
T Consensus 336 eEIYKEf~eIA 346 (472)
T 3re2_A 336 EEMYKEFHEIA 346 (472)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66766555443
No 348
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=55.24 E-value=56 Score=35.76 Aligned_cols=100 Identities=9% Similarity=-0.106 Sum_probs=74.7
Q ss_pred HHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC-C
Q psy4385 271 LLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE-P 349 (473)
Q Consensus 271 ~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~-p 349 (473)
.+..+=+.|.+.|+.++|...+.+..+... .--..+...|+-+-..|.+.|++++|...+++..+.. .
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~-----------kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~ 197 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQ-----------KRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLT 197 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHH-----------HHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhh-----------cCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC
Confidence 455666788999999999999976432110 0001236688888889999999999999999987653 2
Q ss_pred CCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhc
Q psy4385 350 NNEKAFFRRGNAYLDLNE-PELAEKDFQKVLQI 381 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~lg~-~~~A~~~~~~al~l 381 (473)
-|...|..+-.++.+.|+ .++|.+.|+.....
T Consensus 198 PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 198 PDLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp CCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 367778888888888887 57888888877664
No 349
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=53.86 E-value=18 Score=31.33 Aligned_cols=55 Identities=11% Similarity=-0.103 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHH-----HHHHHhcCCHH
Q psy4385 315 KTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRR-----GNAYLDLNEPE 369 (473)
Q Consensus 315 ~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~-----g~a~~~lg~~~ 369 (473)
...+..++.+|..++..++|.+|..++..|+...|.......++ --+.+-+|++.
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34678889999999999999999999999999988765433332 23345567754
No 350
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=51.78 E-value=18 Score=27.01 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=26.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHH
Q psy4385 357 RRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKL 392 (473)
Q Consensus 357 ~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l 392 (473)
.+|..+...|+++.|+..|-+|+.++|+-......+
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~ 60 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 60 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 467778888888888888888888887755544333
No 351
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=51.18 E-value=68 Score=23.30 Aligned_cols=19 Identities=11% Similarity=-0.104 Sum_probs=9.5
Q ss_pred HHhcCCHHHHHHHHHHHHh
Q psy4385 362 YLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 362 ~~~lg~~~~A~~~~~~al~ 380 (473)
.-..|+|++|+..|..+++
T Consensus 26 ~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 26 LDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 3445555555555554443
No 352
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=51.10 E-value=34 Score=35.51 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4385 353 KAFFRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQK 403 (473)
Q Consensus 353 ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 403 (473)
.+...+|+..+..|+|.-|...+..++..+|+|..++..++.+++++..+.
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 445666777777777777777777777777777777777777776665443
No 353
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=50.79 E-value=1.2e+02 Score=29.14 Aligned_cols=63 Identities=5% Similarity=0.016 Sum_probs=44.5
Q ss_pred HHHHHHHHhhh-----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHH
Q psy4385 337 AKDQCDKAIEL-----EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI------DPNNKAAVQKLTQTKQKL 399 (473)
Q Consensus 337 A~~~~~~al~~-----~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~ 399 (473)
++..|++|+.. ....+..|-.+|-.+++.++|.+|++.+..|-.. ..++.++++++..+...+
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIanel 356 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDV 356 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHHh
Confidence 55666666643 3455677777788899999999999999888554 456778887775554433
No 354
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=49.60 E-value=25 Score=25.40 Aligned_cols=18 Identities=11% Similarity=0.241 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHhcCCCCH
Q psy4385 369 ELAEKDFQKVLQIDPNNK 386 (473)
Q Consensus 369 ~~A~~~~~~al~l~P~~~ 386 (473)
.+|++.|..+++..|+..
T Consensus 35 ~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 35 KKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHCCCHH
Confidence 344555556666565543
No 355
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=49.57 E-value=39 Score=30.35 Aligned_cols=53 Identities=25% Similarity=0.199 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHhh
Q psy4385 286 ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAIE 346 (473)
Q Consensus 286 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al~ 346 (473)
+.|...|+.|..+. ..-+ ..+|....+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~-------pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLE-------PTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSC-------TTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCC-------CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56788899999776 3222 2356778888899888877 7899999998888764
No 356
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=49.23 E-value=1e+02 Score=29.69 Aligned_cols=60 Identities=5% Similarity=-0.000 Sum_probs=43.6
Q ss_pred HHHHHHHHhhh-----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHH
Q psy4385 337 AKDQCDKAIEL-----EPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQI------DPNNKAAVQKLTQTK 396 (473)
Q Consensus 337 A~~~~~~al~~-----~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~ 396 (473)
++..|.+|+.. ...++..|-.+|-.|++.++|.+|++.+-.|-.. ..++.++++++-.+.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIA 368 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVA 368 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 66666666643 3456777788888999999999999999877554 345677777665554
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=48.75 E-value=78 Score=34.41 Aligned_cols=75 Identities=16% Similarity=0.007 Sum_probs=48.6
Q ss_pred HhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCCh--hHHHHH------HHHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q psy4385 273 KERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEG--EQETER------KKTLTACHLNAAMCLLKLKQAKPAKDQCDKA 344 (473)
Q Consensus 273 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~--~~~~~~------~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 344 (473)
+-+|..++..|++++|..+|++|-..+........ .....+ .......|+..+..+-+.+-|+.+++.++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 56899999999999999999998755433221111 111111 1123346677777777777777777777777
Q ss_pred hhh
Q psy4385 345 IEL 347 (473)
Q Consensus 345 l~~ 347 (473)
|+.
T Consensus 924 I~~ 926 (950)
T 4gq2_M 924 DAS 926 (950)
T ss_dssp HHT
T ss_pred Hhh
Confidence 754
No 358
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=48.01 E-value=60 Score=23.71 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=29.0
Q ss_pred HhhHHHHhhcchhhhcccHHHHHHHHHHHhhhh
Q psy4385 267 EQGKLLKERGTTYFKQDKFELACRNYKKAIPYL 299 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~ 299 (473)
..++.+...|..+|+.++|.+|...|+++...-
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 567788889999999999999999999998553
No 359
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=47.98 E-value=86 Score=25.86 Aligned_cols=69 Identities=7% Similarity=0.058 Sum_probs=47.2
Q ss_pred HHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHH-HHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 272 LKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACH-LNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 272 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~-~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
-...|..+|..|+|-+|...++.+=.-... .+ + +..-....+. ..-|..+++.|+...|...+.+++..
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~---~~-~---er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGR---GN-T---ESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCS---SS-H---HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCC---Cc-h---HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 355788899999999999998877533221 00 1 1222334444 55666777889999999999999763
No 360
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=47.13 E-value=27 Score=25.29 Aligned_cols=16 Identities=6% Similarity=0.100 Sum_probs=8.1
Q ss_pred HHHHHHHHHHhcCCCC
Q psy4385 370 LAEKDFQKVLQIDPNN 385 (473)
Q Consensus 370 ~A~~~~~~al~l~P~~ 385 (473)
+|++.|..++...|+.
T Consensus 44 ~aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 44 KAIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHCCCH
Confidence 3444455555555543
No 361
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=45.96 E-value=38 Score=29.74 Aligned_cols=60 Identities=13% Similarity=-0.015 Sum_probs=44.2
Q ss_pred hhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHhh
Q psy4385 280 FKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAIE 346 (473)
Q Consensus 280 ~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al~ 346 (473)
|..|+-+.|...|+.|..+....- ...+|....+.+|.+..|+. +++.++|+....+|+.
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L-------~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHP-------DKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCG-------GGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhC-------CCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 455667889999999986643211 13356677788888888775 7889999999998866
No 362
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=45.52 E-value=31 Score=30.50 Aligned_cols=54 Identities=17% Similarity=0.060 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHhh
Q psy4385 286 ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAIE 346 (473)
Q Consensus 286 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al~ 346 (473)
+.|...|+.|..+....-+ ..+|....+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~-------pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELP-------PTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSC-------TTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCC-------CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5678889999866432111 2356777888888888776 7899999988877653
No 363
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=44.15 E-value=1.8e+02 Score=26.78 Aligned_cols=27 Identities=19% Similarity=0.068 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy4385 350 NNEKAFFRRGNAYLDLNEPELAEKDFQ 376 (473)
Q Consensus 350 ~~~ka~~~~g~a~~~lg~~~~A~~~~~ 376 (473)
.++..+..+|..|.+-+++.+|...|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 466778888999999999999998875
No 364
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=43.90 E-value=60 Score=27.90 Aligned_cols=18 Identities=6% Similarity=0.224 Sum_probs=10.7
Q ss_pred ccccCCceeeccCCCCCC
Q psy4385 454 FEKENPNIFMLDGTGDFK 471 (473)
Q Consensus 454 ~~~~~~n~~~~~~~~~~~ 471 (473)
.-......+|+..+.||-
T Consensus 180 ~I~~~~~~lVlsk~~pFP 197 (203)
T 3t5x_A 180 YISHQHQKLVVSKQNPFP 197 (203)
T ss_dssp EEETTTTEEEECSSCSSC
T ss_pred EEcccccEEEECCCCCCC
Confidence 344555667776666663
No 365
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=42.78 E-value=55 Score=24.03 Aligned_cols=65 Identities=22% Similarity=0.072 Sum_probs=40.6
Q ss_pred HhhHHHHhhcchhhhc---ccHHHHHHHHHHHhhhhcC----CCCCChhHHHHHHHHHHHHHHHHHHHHHHc
Q psy4385 267 EQGKLLKERGTTYFKQ---DKFELACRNYKKAIPYLDF----DGGFEGEQETERKKTLTACHLNAAMCLLKL 331 (473)
Q Consensus 267 ~~a~~~~~~G~~~~~~---~~~~~A~~~y~~al~~~~~----~~~~~~~~~~~~~~~~~~~~~nla~~~~kl 331 (473)
+.|-.+.+.|...-.. |+-+.|+.+|++++..+.. ......+.|.....+...-..||.++--++
T Consensus 14 ~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 14 KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666555 7777888888888766543 122255667777777777777777665443
No 366
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=42.69 E-value=33 Score=35.60 Aligned_cols=50 Identities=16% Similarity=0.076 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCH
Q psy4385 319 ACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEP 368 (473)
Q Consensus 319 ~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~ 368 (473)
......|...+..|+|.-|.+.++.++..+|+|..|..-++.+|.++|.-
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 45667888889999999999999999999999999999999999888753
No 367
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=42.13 E-value=33 Score=37.34 Aligned_cols=52 Identities=19% Similarity=0.156 Sum_probs=40.5
Q ss_pred HHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy4385 324 AAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVL 379 (473)
Q Consensus 324 la~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al 379 (473)
++..++..+.++-| ...+..-|.++-.-|-+|.+|+..|++++|..+|++|-
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 33444556666644 34567778888888999999999999999999999886
No 368
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=41.90 E-value=39 Score=30.16 Aligned_cols=53 Identities=13% Similarity=0.039 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHh
Q psy4385 286 ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAI 345 (473)
Q Consensus 286 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al 345 (473)
+.|...|+.|..+....-+ ..+|....+.+|.+..|+. +++.++|+..+.+|+
T Consensus 148 ~~a~~aY~~A~~iA~~~L~-------pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQ-------PTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSC-------TTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCC-------CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5678889998865432111 2356777788888888776 788888888777754
No 369
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=41.21 E-value=25 Score=24.85 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=30.8
Q ss_pred hhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcC
Q psy4385 263 DEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDF 301 (473)
Q Consensus 263 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~ 301 (473)
+++...-.....+|..+...|++++|+.+|-+|+..++.
T Consensus 11 e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 11 EAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 334444556667899999999999999999999977664
No 370
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=40.95 E-value=41 Score=30.23 Aligned_cols=53 Identities=17% Similarity=0.044 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHh
Q psy4385 286 ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAI 345 (473)
Q Consensus 286 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al 345 (473)
+.|...|+.|..+....-+ ..+|....+.+|.+..|+. +++.++|+..+.+|+
T Consensus 173 e~a~~aY~~A~~iA~~~L~-------pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELP-------PTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSC-------TTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCC-------CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5677889888865432111 2356777888888888776 688888888877765
No 371
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=40.92 E-value=40 Score=30.32 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHh
Q psy4385 286 ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAI 345 (473)
Q Consensus 286 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al 345 (473)
+.|...|+.|..+....-+ ..+|....+.+|.+..|+. +++.++|+..+.+|+
T Consensus 152 e~a~~aY~~A~~iA~~~L~-------pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELA-------PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSC-------TTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCC-------CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 5678889999866432111 2356778888888888776 788999988877754
No 372
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=40.64 E-value=85 Score=30.90 Aligned_cols=93 Identities=22% Similarity=0.106 Sum_probs=49.4
Q ss_pred chhHHHhhHHHHhhcchh--hhc-ccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHH
Q psy4385 262 SDEKLEQGKLLKERGTTY--FKQ-DKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAK 338 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~--~~~-~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~ 338 (473)
..++...|+.++..+... -+. .--..|+.+|++|+.++......++ +.....++++|.- |+.|=
T Consensus 422 L~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd-------~~~v~~~~~~ak~------yE~aG 488 (526)
T 2wb7_A 422 LQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDD-------YQMFLNYLNAAKK------HEMAG 488 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCS-------HHHHHHHHHHHHH------HHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCC-------HHHHHHHHHHhhh------hhhcc
Confidence 455556666666654211 111 2236789999999987764322211 2234445555433 34444
Q ss_pred HHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q psy4385 339 DQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQID 382 (473)
Q Consensus 339 ~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~ 382 (473)
++|.+| .-....|..+.|..+-..|-++.
T Consensus 489 Dyy~~A---------------A~k~~yG~~eqAe~l~~~A~~~~ 517 (526)
T 2wb7_A 489 DYYVNA---------------ARKALNGDLEQAKIDAEKAKEYS 517 (526)
T ss_dssp HHHHHH---------------HHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHH---------------HHHHhcCccHHHHHHHHHHHHHH
Confidence 433333 33345677777777777766553
No 373
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=39.64 E-value=66 Score=23.82 Aligned_cols=62 Identities=16% Similarity=0.093 Sum_probs=39.7
Q ss_pred hhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 274 ERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 274 ~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
..|..+|..|+|-+|...++..=.-.+ . .+..-....+...-|..+.+.|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~------~---~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKAT------G---EERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC------H---HHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCC------C---chHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 356778999999999998887653221 0 122223334444455556667777 8888888875
No 374
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=38.87 E-value=42 Score=37.37 Aligned_cols=53 Identities=19% Similarity=0.165 Sum_probs=41.7
Q ss_pred HHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy4385 323 NAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVL 379 (473)
Q Consensus 323 nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al 379 (473)
.+...+++.++++.|.+ .+...|.++-.-|-+|.+++..|++++|..+|++|.
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 44555667777776544 345667788888999999999999999999999884
No 375
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=37.32 E-value=2.6e+02 Score=26.06 Aligned_cols=108 Identities=20% Similarity=0.163 Sum_probs=56.9
Q ss_pred HHhhHHHHhhcchhhhcccHHHHHHH-HHHHhhhhcCCCCCChhHHHHHHHHH------------HHHHHHHHHHHHHcC
Q psy4385 266 LEQGKLLKERGTTYFKQDKFELACRN-YKKAIPYLDFDGGFEGEQETERKKTL------------TACHLNAAMCLLKLK 332 (473)
Q Consensus 266 ~~~a~~~~~~G~~~~~~~~~~~A~~~-y~~al~~~~~~~~~~~~~~~~~~~~~------------~~~~~nla~~~~kl~ 332 (473)
.+.-+.++-..+.|.++++|.+|+.. |.-|..++......... .+--+. .....++..++....
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~---DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~ 108 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGG---DLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQ 108 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSC
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHH---HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCC
Confidence 44556677788888899999999886 44444444432110000 000000 112222333332222
Q ss_pred C--------hhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy4385 333 Q--------AKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQ 376 (473)
Q Consensus 333 ~--------~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~ 376 (473)
. ..+|+.+..+.=...-.++..+..+|..|.+-++|.+|...|-
T Consensus 109 ~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 109 PGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 2 1123333332111122466778888999999999999988873
No 376
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=36.01 E-value=39 Score=25.18 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=31.7
Q ss_pred chhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhc
Q psy4385 262 SDEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLD 300 (473)
Q Consensus 262 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~ 300 (473)
.+++...-.....+|..+..+|+++.|+.+|-+|+..++
T Consensus 13 ~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 13 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 345555666777899999999999999999999997665
No 377
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=35.60 E-value=37 Score=24.26 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 321 HLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 321 ~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
...+|.-|..+|+|+.|+.+|+-+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 34566667777888888777776664
No 378
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=35.37 E-value=66 Score=23.57 Aligned_cols=66 Identities=9% Similarity=0.106 Sum_probs=33.7
Q ss_pred ChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHH
Q psy4385 333 QAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELAEKDFQKVLQIDPN-NKAAVQKLTQTKQKLREQK 403 (473)
Q Consensus 333 ~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A~~~~~~al~l~P~-~~~~~~~l~~~~~~~~~~~ 403 (473)
.|+.|..+.+++|..|..+. .|.--..+.-|...+..|.+++.+.-+ ....+.....+..++....
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~-----~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL 78 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEK-----AGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNL 78 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSC-----SSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccc-----CCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHH
Confidence 47788888888888765420 000001122233445667777776433 2334554455554444433
No 379
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=35.32 E-value=47 Score=29.40 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHh
Q psy4385 285 FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAI 345 (473)
Q Consensus 285 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al 345 (473)
-+.|...|+.|..+....-+ ..+|....+.+|.+..|+. +++.++|+..+.+|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~-------pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMP-------PTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSC-------TTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCC-------CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 36778889999865432111 2357778888888888775 688999988877765
No 380
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=34.70 E-value=1.3e+02 Score=21.92 Aligned_cols=29 Identities=17% Similarity=0.251 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q psy4385 354 AFFRRGNAYLDLNEPELAEKDFQKVLQID 382 (473)
Q Consensus 354 a~~~~g~a~~~lg~~~~A~~~~~~al~l~ 382 (473)
.+...|.-+++.++|.+|...|+++..+.
T Consensus 55 ~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 55 SLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 33444555566666666666666666543
No 381
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=34.25 E-value=1.9e+02 Score=23.82 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=43.6
Q ss_pred HHHHHHHHcCChhHHHHHHHHHhhhCCCC------HHHHHH-HHHHH--HhcCCHHHHHHHHHHHHh
Q psy4385 323 NAAMCLLKLKQAKPAKDQCDKAIELEPNN------EKAFFR-RGNAY--LDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 323 nla~~~~kl~~~~~A~~~~~~al~~~p~~------~ka~~~-~g~a~--~~lg~~~~A~~~~~~al~ 380 (473)
..+..++..|+|-+|-+.++.+-...+.. .+++.. ++.++ .+.|+..-|...+.+|+.
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45566777899999999999988776554 345555 54444 557999999999999977
No 382
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.04 E-value=35 Score=34.13 Aligned_cols=68 Identities=10% Similarity=-0.025 Sum_probs=50.5
Q ss_pred hhcchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCC
Q psy4385 274 ERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNN 351 (473)
Q Consensus 274 ~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~ 351 (473)
-+=..|...+.|..|.....++. ++... ..+...+..++.+|.++.-.++|.+|.+++..|+...|.+
T Consensus 236 llLRnYL~~~~y~qA~~lvsk~~--fP~~~--------~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 236 LILRDFLNNGEVDSASDFISKLE--YPHTD--------VSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHSSCSTTHHHHHHHHC--SCTTT--------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHccCcHHHHHHHHhcCc--CCccc--------CCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 33445667788888988888875 22110 1133457888999999999999999999999999887754
No 383
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=31.46 E-value=10 Score=34.15 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=0.0
Q ss_pred hhHHHhhHHHHhhcchhhhcccHHHHHHHHHHHhhhhcC
Q psy4385 263 DEKLEQGKLLKERGTTYFKQDKFELACRNYKKAIPYLDF 301 (473)
Q Consensus 263 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~ 301 (473)
+.....|..+...|..+-+.|+|.+|+.+|..|+.++-.
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~ 55 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 55 (257)
T ss_dssp ---------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 334456777788888999999999999999999987654
No 384
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=30.92 E-value=43 Score=30.22 Aligned_cols=57 Identities=18% Similarity=0.089 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHhhh
Q psy4385 286 ELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLK-LKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 286 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~al~~ 347 (473)
+.|...|+.|..+....- +....+|....+.+|.+..|+. +++.++|+..+.+|+.-
T Consensus 169 e~a~~aYq~A~eiA~~~L-----~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFL-----EKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHC-----TTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc-----CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 556677777775442100 0012355666677777777663 67777777777776643
No 385
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=28.48 E-value=61 Score=31.72 Aligned_cols=55 Identities=15% Similarity=0.182 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 285 FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 285 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
|+..+..++.|+..++.... .-+.....++.-+|.+|+-+++|++|+..+++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~-------~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKN-------NGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCC-------TTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-------CCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45556666666666653211 11233456777889999999999999999999985
No 386
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=27.08 E-value=1.1e+02 Score=28.95 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=37.3
Q ss_pred CCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCc------cchhHHHHhccCCCCcE
Q psy4385 42 GDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQ------VIKAWDRGIATMKKDEV 101 (473)
Q Consensus 42 g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~------~~~g~~~~l~~m~~Ge~ 101 (473)
+...+++||.|.|.+.+.. ||-.-|.+ .+|.+|... .-.+++.|+..++.|-+
T Consensus 117 ~~~~L~~GDiV~ID~G~~~-dGY~sD~a------rT~~vg~~~~~l~~~~~~al~aai~~~~pG~~ 175 (358)
T 3fm3_A 117 QDIVLKEDDVLKIDFGTHS-DGRIMDSA------FTVAFKENLEPLLVAAREGTETGIKSLGVDVR 175 (358)
T ss_dssp CCCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred CCeEecCCCEEEEEeeEEE-CCEEEEEE------EeccccccchhHHHHHHHHHHHHHHhhhcCCc
Confidence 4456899999999999988 88777765 577787532 23455666666666644
No 387
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=26.82 E-value=74 Score=31.32 Aligned_cols=56 Identities=14% Similarity=0.124 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhh
Q psy4385 285 FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIEL 347 (473)
Q Consensus 285 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~ 347 (473)
|+..+..++.|+..++.... .-+.....++.-+|.+|+-+++|++|+..+++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~-------~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETS-------NGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCC-------TTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccc-------CCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 45566667777766654211 112334567778899999999999999999999864
No 388
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=26.52 E-value=3.9e+02 Score=26.37 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcC----------------------------ChhHHH
Q psy4385 287 LACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLK----------------------------QAKPAK 338 (473)
Q Consensus 287 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~----------------------------~~~~A~ 338 (473)
..|......|..++.... ++ ...+.....+++-+|.+|+.|- -|+..+
T Consensus 82 ~~I~~~N~~i~~~~~~~~-~~---~~~~~~~aea~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~~~~r~~~~ev~~~I~ 157 (517)
T 3qnk_A 82 VKVRKCNRFFERIGTSTI-EE---SEKSRLTGEVHFLRAMFYFEMVKRYGGVILLDKVLTMEDNWEIPRSSEKECYDFIL 157 (517)
T ss_dssp HHHHHHHHHHHHGGGCCS-CH---HHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCSSCCCTTSCCCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCC-CH---HHHHHHHHHHHHHHHHHHHHHHHHhCCceeeCCcCCccccccCCCCCHHHHHHHHH
Confidence 455555555555443221 11 2334556666777777666420 145667
Q ss_pred HHHHHHhhhCCC-----------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 339 DQCDKAIELEPN-----------NEKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 339 ~~~~~al~~~p~-----------~~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
.+++.|+..-|. ..-|+--+|.+|+..++|++|...+++++.
T Consensus 158 ~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 158 EDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777765443 124677889999999999999999999985
No 389
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=26.08 E-value=2e+02 Score=21.16 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4385 366 NEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKI 404 (473)
Q Consensus 366 g~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 404 (473)
+...+++.....+++.+|+|+.++..+........-.+.
T Consensus 30 ~~~~~~l~~Al~~L~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 30 KDLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345566666777778899999887766665544433333
No 390
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=25.98 E-value=69 Score=31.40 Aligned_cols=55 Identities=16% Similarity=0.044 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 285 FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 285 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
|+..+..++.|+..++.... .-+.....++.-+|.+|+-+++|++|+..+++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~-------~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFN-------KGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCC-------TTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccC-------CCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 34555566666666553211 11233456777888899999999999999999985
No 391
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=25.81 E-value=1.3e+02 Score=29.30 Aligned_cols=96 Identities=10% Similarity=-0.015 Sum_probs=54.5
Q ss_pred HHHHhhcchhhhcccHHHHHHHHHHHhhhhcCCCCCCh-------hHHHH-HHHHHHHHHHHHHHHHHHcCChhHHHHHH
Q psy4385 270 KLLKERGTTYFKQDKFELACRNYKKAIPYLDFDGGFEG-------EQETE-RKKTLTACHLNAAMCLLKLKQAKPAKDQC 341 (473)
Q Consensus 270 ~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~-------~~~~~-~~~~~~~~~~nla~~~~kl~~~~~A~~~~ 341 (473)
.-+..+.+.+...++|.+|.-++.....++..+....- ..... .......++...+..+.+-+.|+.|+..|
T Consensus 36 ~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~ 115 (436)
T 2yin_A 36 RYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLC 115 (436)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 34456788899999999999988666555544222100 00000 01122234555555666777888888888
Q ss_pred HHHhhhCCCCHHHHHHHHHHHHhc
Q psy4385 342 DKAIELEPNNEKAFFRRGNAYLDL 365 (473)
Q Consensus 342 ~~al~~~p~~~ka~~~~g~a~~~l 365 (473)
+.++..-..+..-|-.++.+|..+
T Consensus 116 k~L~~~yE~~~~Dy~~Ls~~~~~~ 139 (436)
T 2yin_A 116 KELAEQYEMEIFDYELLSQNLIQQ 139 (436)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888755433333344555555443
No 392
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=24.57 E-value=3.3e+02 Score=23.26 Aligned_cols=87 Identities=2% Similarity=-0.107 Sum_probs=58.6
Q ss_pred HHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhC--CCCHHHHHHHHHHHHhcCC
Q psy4385 290 RNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELE--PNNEKAFFRRGNAYLDLNE 367 (473)
Q Consensus 290 ~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~--p~~~ka~~~~g~a~~~lg~ 367 (473)
..++++++.+..+... .-++-...+|...+.++ ..++...+.+.|....... -..+..|-..|..+...|+
T Consensus 58 ~lLErc~~~F~~~~rY------kND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETY------RNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGG------TTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccc------cCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCC
Confidence 4566666555432211 22445566676666654 1233567888888776554 4556666788999999999
Q ss_pred HHHHHHHHHHHHhcCC
Q psy4385 368 PELAEKDFQKVLQIDP 383 (473)
Q Consensus 368 ~~~A~~~~~~al~l~P 383 (473)
|.+|...|+.+++-.-
T Consensus 131 ~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 131 FLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999999998653
No 393
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=24.37 E-value=1.1e+02 Score=24.95 Aligned_cols=24 Identities=13% Similarity=0.189 Sum_probs=20.7
Q ss_pred ccchhHHHHhccCCCCcEEEEEec
Q psy4385 84 QVIKAWDRGIATMKKDEVAVFTCK 107 (473)
Q Consensus 84 ~~~~g~~~~l~~m~~Ge~~~v~i~ 107 (473)
.+..-+-.||.|.++|+.+.+..|
T Consensus 119 S~~SPlg~ALlGk~vGD~v~v~~P 142 (158)
T 2p4v_A 119 SIDSPMARALLKKEVGDLAVVNTP 142 (158)
T ss_dssp CTTSHHHHHSTTCCTTCEEEEECS
T ss_pred cCCCHHHHHhcCCCCCCEEEEEcC
Confidence 355668899999999999999877
No 394
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=23.18 E-value=97 Score=33.17 Aligned_cols=63 Identities=25% Similarity=0.383 Sum_probs=46.0
Q ss_pred CCCCCCEEEEEEEEEec-CCC-EEe---------------ccCC-----------CCccEEEEeCCCccchhHHHHhccC
Q psy4385 45 TPSAGCKVKVHYTGTLL-DGT-VFD---------------SSKT-----------RGEPFEFDLGKGQVIKAWDRGIATM 96 (473)
Q Consensus 45 ~~~~gd~V~v~y~~~~~-dg~-~~~---------------st~~-----------~~~p~~~~~g~~~~~~g~~~~l~~m 96 (473)
.+..|+.|.|.|+..+- +|. .-+ +.|. ....+.|.+|.+.+.+-++-.|..|
T Consensus 560 ~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qm 639 (950)
T 3htx_A 560 SITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQM 639 (950)
T ss_dssp CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTC
T ss_pred ccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeec
Confidence 56889999999999883 221 111 0010 1135789999999999999999999
Q ss_pred CCCcEEEEEec
Q psy4385 97 KKDEVAVFTCK 107 (473)
Q Consensus 97 ~~Ge~~~v~i~ 107 (473)
.+|+...|...
T Consensus 640 s~gqT~~F~~~ 650 (950)
T 3htx_A 640 TVGEYASFKMT 650 (950)
T ss_dssp CTTCEEEEEES
T ss_pred cccceeEEecc
Confidence 99999998743
No 395
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=22.85 E-value=96 Score=30.72 Aligned_cols=58 Identities=14% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 285 FELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 285 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
|+..+..++.|+..++....... ..+.....++.-+|.+|+-+++|++|+..+++++.
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~----~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDA----KHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSS----TTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCccc----CCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
No 396
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=22.75 E-value=2.3e+02 Score=28.97 Aligned_cols=117 Identities=8% Similarity=-0.114 Sum_probs=66.2
Q ss_pred cchhhhcccHHHHHHHHHHHhhhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHH
Q psy4385 276 GTTYFKQDKFELACRNYKKAIPYLDFDGGFEGEQETERKKTLTACHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAF 355 (473)
Q Consensus 276 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~ 355 (473)
+...+...+...|...|.+..+-.. .+.+ ........+|.-++..+...++...+.++.....+....-
T Consensus 221 ~~~rlar~d~~~A~~~~~~~~~~~~----~~~~-------~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 289 (618)
T 1qsa_A 221 AFASVARQDAENARLMIPSLAQAQQ----LNED-------QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIE 289 (618)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTT----CCHH-------HHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHhhhhccC----CCHH-------HHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHH
Confidence 3444455577777777766542111 1111 1122333344444444435567777777665544444344
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4385 356 FRRGNAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQKLREQKI 404 (473)
Q Consensus 356 ~~~g~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 404 (473)
.+.+.++ ..++++.|...|.+.-.-.+......+.+++....+++..+
T Consensus 290 ~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~ 337 (618)
T 1qsa_A 290 RRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAE 337 (618)
T ss_dssp HHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHH
Confidence 4444554 66999999999976654333456778888888766654443
No 397
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=22.62 E-value=2.2e+02 Score=20.49 Aligned_cols=30 Identities=10% Similarity=-0.013 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 368 PELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 368 ~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
.-+++..-..+|+-+|+|+..+..+.....
T Consensus 26 ~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~ 55 (85)
T 2ca5_A 26 LQGELTLALDKLAKNPSNPQLLAEYQSKLS 55 (85)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 345555566667778888877665554433
No 398
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=21.43 E-value=2.4e+02 Score=24.84 Aligned_cols=56 Identities=21% Similarity=0.229 Sum_probs=40.7
Q ss_pred CCCCCCCCCCCEEEEEEEEEecCCCEEeccCCCCccEEEEeCCCc---------cchhHHHHhccCCCCcEE
Q psy4385 40 GVGDTTPSAGCKVKVHYTGTLLDGTVFDSSKTRGEPFEFDLGKGQ---------VIKAWDRGIATMKKDEVA 102 (473)
Q Consensus 40 g~g~~~~~~gd~V~v~y~~~~~dg~~~~st~~~~~p~~~~~g~~~---------~~~g~~~~l~~m~~Ge~~ 102 (473)
..+...++.||.|.+.+-+.. +|-.-|.| .+|.+|... +..+++.++..++.|-++
T Consensus 79 ~~~~~~l~~Gdlv~iD~g~~~-~GY~sD~t------RT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~ 143 (264)
T 3tb5_A 79 FPRKKVLKDGDLIKVDMCVDL-KGAISDSC------WSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRI 143 (264)
T ss_dssp CCCSCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBH
T ss_pred CCCCccccCCCEEEEecccee-cceeeecc------cccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCH
Confidence 334557899999999998876 77655554 567777632 456778888889988653
No 399
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=20.87 E-value=1.6e+02 Score=28.72 Aligned_cols=47 Identities=13% Similarity=0.046 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhhhCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy4385 334 AKPAKDQCDKAIELEPN--------NEKAFFRRGNAYLDLNEPELAEKDFQKVLQ 380 (473)
Q Consensus 334 ~~~A~~~~~~al~~~p~--------~~ka~~~~g~a~~~lg~~~~A~~~~~~al~ 380 (473)
|+..+.+++.|+.+-|. ..-|+--+|.+|+..++|++|+...+.++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45667777777765443 235677889999999999999999988874
No 400
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=25.96 E-value=21 Score=37.12 Aligned_cols=52 Identities=13% Similarity=0.048 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHhhhCCCCHHHHHHHHHHHHhcCCHHHH
Q psy4385 320 CHLNAAMCLLKLKQAKPAKDQCDKAIELEPNNEKAFFRRGNAYLDLNEPELA 371 (473)
Q Consensus 320 ~~~nla~~~~kl~~~~~A~~~~~~al~~~p~~~ka~~~~g~a~~~lg~~~~A 371 (473)
..+..|..++..|+|.-|.+.++.++..+|+|..|..-++.+|.++|.-.+.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 4556667777788888888888888888888888888888888888765543
No 401
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=20.36 E-value=1.2e+02 Score=26.26 Aligned_cols=38 Identities=21% Similarity=0.182 Sum_probs=29.5
Q ss_pred HHHHhcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4385 360 NAYLDLNEPELAEKDFQKVLQIDPNNKAAVQKLTQTKQ 397 (473)
Q Consensus 360 ~a~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 397 (473)
.++.+.|.|++|.+.|++...-+|.+...+..|..+-.
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~ 159 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIR 159 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHH
T ss_pred HHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHh
Confidence 34577899999999999999888777777766665543
No 402
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=20.34 E-value=87 Score=25.58 Aligned_cols=23 Identities=4% Similarity=0.062 Sum_probs=20.0
Q ss_pred cchhHHHHhccCCCCcEEEEEec
Q psy4385 85 VIKAWDRGIATMKKDEVAVFTCK 107 (473)
Q Consensus 85 ~~~g~~~~l~~m~~Ge~~~v~i~ 107 (473)
+..-+-.||.|.++|+.+.+..|
T Consensus 121 ~~SPlG~ALlGk~~GD~v~~~~p 143 (156)
T 2f23_A 121 DASPMGKALLGHRVGDVLSLDTP 143 (156)
T ss_dssp TTSHHHHHHTTCCTTCEEEEEET
T ss_pred CCCHHHHHHcCCCCCCEEEEEcC
Confidence 34568899999999999999887
No 403
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.18 E-value=1.3e+02 Score=29.41 Aligned_cols=31 Identities=16% Similarity=-0.031 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHhh
Q psy4385 316 TLTACHLNAAMCLLKLKQAKPAKDQCDKAIE 346 (473)
Q Consensus 316 ~~~~~~~nla~~~~kl~~~~~A~~~~~~al~ 346 (473)
....++.-+|.+|+-+++|++|+..+++++.
T Consensus 189 tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 189 NTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3456777889999999999999999999985
Done!